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geneid	64219
ensemblid	ENSG00000181191.12
hgncid	16648
symbol	PJA1
name	praja ring finger ubiquitin ligase 1
refseq_nuc	NM_001032396.4
refseq_prot	NP_001027568.1
ensembl_nuc	ENST00000374571.5
ensembl_prot	ENSP00000363699.3
mane_status	MANE Select
chr	chrX
start	69160861
end	69165453
strand	-
ver	v1.2
region	chrX:69160861-69165453
region5000	chrX:69155861-69170453
regionname0	PJA1_chrX_69160861_69165453
regionname5000	PJA1_chrX_69155861_69170453

ahapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	alen	total	AFR	AMR	EAS	EUR	SAS	JPT	regionname	genename	aa	chr	start	end
a0001	1/0	588	310	73	52	145	6	33	115	PJA1_chrX_69155861_69170453	PJA1	copy fasta	chrX	69155861	69170453
a0002	0/1	588	17	0	8	0	7	1	0	PJA1_chrX_69155861_69170453	PJA1	copy fasta	chrX	69155861	69170453
a0003	0/0	588	4	4	0	0	0	0	0	PJA1_chrX_69155861_69170453	PJA1	copy fasta	chrX	69155861	69170453
a0004	0/0	588	1	0	0	1	0	0	0	PJA1_chrX_69155861_69170453	PJA1	copy fasta	chrX	69155861	69170453
a0005	0/0	588	1	1	0	0	0	0	0	PJA1_chrX_69155861_69170453	PJA1	copy fasta	chrX	69155861	69170453
a0006	0/0	588	1	0	0	1	0	0	1	PJA1_chrX_69155861_69170453	PJA1	copy fasta	chrX	69155861	69170453

chapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	clen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	cseq	chr	start	end
c0001	1/0	1767	268	65	36	132	5	29	PJA1_chrX_69155861_69170453	PJA1	copy fasta	chrX	69155861	69170453
c0002	0/0	1767	35	5	14	13	1	2	PJA1_chrX_69155861_69170453	PJA1	copy fasta	chrX	69155861	69170453
c0003	0/1	1767	17	0	8	0	7	1	PJA1_chrX_69155861_69170453	PJA1	copy fasta	chrX	69155861	69170453
c0004	0/0	1767	4	4	0	0	0	0	PJA1_chrX_69155861_69170453	PJA1	copy fasta	chrX	69155861	69170453
c0005	0/0	1767	2	0	2	0	0	0	PJA1_chrX_69155861_69170453	PJA1	copy fasta	chrX	69155861	69170453
c0006	0/0	1767	1	0	0	0	0	1	PJA1_chrX_69155861_69170453	PJA1	copy fasta	chrX	69155861	69170453
c0007	0/0	1767	1	0	0	0	0	1	PJA1_chrX_69155861_69170453	PJA1	copy fasta	chrX	69155861	69170453
c0008	0/0	1767	1	1	0	0	0	0	PJA1_chrX_69155861_69170453	PJA1	copy fasta	chrX	69155861	69170453
c0009	0/0	1767	1	0	0	1	0	0	PJA1_chrX_69155861_69170453	PJA1	copy fasta	chrX	69155861	69170453
c0010	0/0	1767	1	0	0	1	0	0	PJA1_chrX_69155861_69170453	PJA1	copy fasta	chrX	69155861	69170453
c0011	0/0	1767	1	1	0	0	0	0	PJA1_chrX_69155861_69170453	PJA1	copy fasta	chrX	69155861	69170453
c0012	0/0	1767	1	1	0	0	0	0	PJA1_chrX_69155861_69170453	PJA1	copy fasta	chrX	69155861	69170453
c0013	0/0	1767	1	1	0	0	0	0	PJA1_chrX_69155861_69170453	PJA1	copy fasta	chrX	69155861	69170453

thapid	grch38 chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	tlen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	tseq	chr	start	end
t0001	1/1	596	331	75	60	147	13	34	PJA1_chrX_69155861_69170453	PJA1	copy fasta	chrX	69155861	69170453
t0002	0/0	596	3	3	0	0	0	0	PJA1_chrX_69155861_69170453	PJA1	copy fasta	chrX	69155861	69170453

ghapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	chr	start	end
g0001	0/0	136	5	20	84	3	24	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
g0002	0/0	32	5	13	11	1	2	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
g0003	0/0	24	7	3	8	2	4	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
g0004	1/0	20	18	1	0	0	0	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
g0005	0/0	20	0	3	17	0	0	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
g0006	0/1	17	0	8	0	7	1	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
g0007	0/0	16	12	1	3	0	0	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
g0008	0/0	9	7	1	1	0	0	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
g0009	0/0	5	0	0	5	0	0	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
g0010	0/0	5	0	0	5	0	0	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
g0011	0/0	4	3	1	0	0	0	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
g0012	0/0	4	2	1	1	0	0	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
g0013	0/0	3	3	0	0	0	0	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
g0014	0/0	3	0	3	0	0	0	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
g0015	0/0	2	2	0	0	0	0	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
g0016	0/0	2	0	0	2	0	0	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
g0017	0/0	2	0	2	0	0	0	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
g0018	0/0	2	0	2	0	0	0	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
g0019	0/0	2	2	0	0	0	0	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
g0020	0/0	2	2	0	0	0	0	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
g0021	0/0	2	2	0	0	0	0	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
g0022	0/0	2	0	0	2	0	0	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
g0023	0/0	1	1	0	0	0	0	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
g0024	0/0	1	0	0	1	0	0	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
g0025	0/0	1	0	0	1	0	0	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
g0026	0/0	1	0	0	1	0	0	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
g0027	0/0	1	0	0	1	0	0	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
g0028	0/0	1	0	1	0	0	0	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
g0029	0/0	1	1	0	0	0	0	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
g0030	0/0	1	0	0	1	0	0	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
g0031	0/0	1	0	0	1	0	0	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
g0032	0/0	1	0	0	0	0	1	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
g0033	0/0	1	0	0	1	0	0	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
g0034	0/0	1	1	0	0	0	0	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
g0035	0/0	1	1	0	0	0	0	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
g0036	0/0	1	1	0	0	0	0	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
g0037	0/0	1	0	0	1	0	0	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
g0038	0/0	1	0	0	0	0	1	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
g0039	0/0	1	1	0	0	0	0	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
g0040	0/0	1	1	0	0	0	0	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
g0041	0/0	1	1	0	0	0	0	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
g0042	0/0	1	0	0	0	0	1	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453

achapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	clen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	cseq	chr	start	end
a0001c0001	1/0	1767	268	65	36	132	5	29	PJA1_chrX_69155861_69170453	PJA1	copy fasta	chrX	69155861	69170453
a0001c0002	0/0	1767	35	5	14	13	1	2	PJA1_chrX_69155861_69170453	PJA1	copy fasta	chrX	69155861	69170453
a0001c0005	0/0	1767	2	0	2	0	0	0	PJA1_chrX_69155861_69170453	PJA1	copy fasta	chrX	69155861	69170453
a0001c0006	0/0	1767	1	0	0	0	0	1	PJA1_chrX_69155861_69170453	PJA1	copy fasta	chrX	69155861	69170453
a0001c0007	0/0	1767	1	0	0	0	0	1	PJA1_chrX_69155861_69170453	PJA1	copy fasta	chrX	69155861	69170453
a0001c0008	0/0	1767	1	1	0	0	0	0	PJA1_chrX_69155861_69170453	PJA1	copy fasta	chrX	69155861	69170453
a0001c0011	0/0	1767	1	1	0	0	0	0	PJA1_chrX_69155861_69170453	PJA1	copy fasta	chrX	69155861	69170453
a0001c0013	0/0	1767	1	1	0	0	0	0	PJA1_chrX_69155861_69170453	PJA1	copy fasta	chrX	69155861	69170453
a0002c0003	0/1	1767	17	0	8	0	7	1	PJA1_chrX_69155861_69170453	PJA1	copy fasta	chrX	69155861	69170453
a0003c0004	0/0	1767	4	4	0	0	0	0	PJA1_chrX_69155861_69170453	PJA1	copy fasta	chrX	69155861	69170453
a0004c0009	0/0	1767	1	0	0	1	0	0	PJA1_chrX_69155861_69170453	PJA1	copy fasta	chrX	69155861	69170453
a0005c0012	0/0	1767	1	1	0	0	0	0	PJA1_chrX_69155861_69170453	PJA1	copy fasta	chrX	69155861	69170453
a0006c0010	0/0	1767	1	0	0	1	0	0	PJA1_chrX_69155861_69170453	PJA1	copy fasta	chrX	69155861	69170453

acthapid	grch38 chm13v2	tlen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	tseq	chr	start	end
a0001c0001t0001	1/0	2362	265	62	36	132	5	29	PJA1_chrX_69155861_69170453	PJA1	copy fasta	chrX	69155861	69170453
a0001c0001t0002	0/0	2362	3	3	0	0	0	0	PJA1_chrX_69155861_69170453	PJA1	copy fasta	chrX	69155861	69170453
a0001c0002t0001	0/0	2362	35	5	14	13	1	2	PJA1_chrX_69155861_69170453	PJA1	copy fasta	chrX	69155861	69170453
a0001c0005t0001	0/0	2362	2	0	2	0	0	0	PJA1_chrX_69155861_69170453	PJA1	copy fasta	chrX	69155861	69170453
a0001c0006t0001	0/0	2362	1	0	0	0	0	1	PJA1_chrX_69155861_69170453	PJA1	copy fasta	chrX	69155861	69170453
a0001c0007t0001	0/0	2362	1	0	0	0	0	1	PJA1_chrX_69155861_69170453	PJA1	copy fasta	chrX	69155861	69170453
a0001c0008t0001	0/0	2362	1	1	0	0	0	0	PJA1_chrX_69155861_69170453	PJA1	copy fasta	chrX	69155861	69170453
a0001c0011t0001	0/0	2362	1	1	0	0	0	0	PJA1_chrX_69155861_69170453	PJA1	copy fasta	chrX	69155861	69170453
a0001c0013t0001	0/0	2362	1	1	0	0	0	0	PJA1_chrX_69155861_69170453	PJA1	copy fasta	chrX	69155861	69170453
a0002c0003t0001	0/1	2362	17	0	8	0	7	1	PJA1_chrX_69155861_69170453	PJA1	copy fasta	chrX	69155861	69170453
a0003c0004t0001	0/0	2362	4	4	0	0	0	0	PJA1_chrX_69155861_69170453	PJA1	copy fasta	chrX	69155861	69170453
a0004c0009t0001	0/0	2362	1	0	0	1	0	0	PJA1_chrX_69155861_69170453	PJA1	copy fasta	chrX	69155861	69170453
a0005c0012t0001	0/0	2362	1	1	0	0	0	0	PJA1_chrX_69155861_69170453	PJA1	copy fasta	chrX	69155861	69170453
a0006c0010t0001	0/0	2362	1	0	0	1	0	0	PJA1_chrX_69155861_69170453	PJA1	copy fasta	chrX	69155861	69170453

actghapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	chr	start	end
a0001c0001t0001g0001	0/0	136	5	20	84	3	24	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
a0001c0001t0001g0003	0/0	24	7	3	8	2	4	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
a0001c0001t0001g0004	1/0	20	18	1	0	0	0	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
a0001c0001t0001g0005	0/0	20	0	3	17	0	0	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
a0001c0001t0001g0007	0/0	16	12	1	3	0	0	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
a0001c0001t0001g0008	0/0	9	7	1	1	0	0	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
a0001c0001t0001g0009	0/0	5	0	0	5	0	0	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
a0001c0001t0001g0010	0/0	5	0	0	5	0	0	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
a0001c0001t0001g0011	0/0	4	3	1	0	0	0	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
a0001c0001t0001g0012	0/0	4	2	1	1	0	0	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
a0001c0001t0001g0014	0/0	3	0	3	0	0	0	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
a0001c0001t0001g0015	0/0	2	2	0	0	0	0	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
a0001c0001t0001g0017	0/0	2	0	2	0	0	0	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
a0001c0001t0001g0020	0/0	2	2	0	0	0	0	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
a0001c0001t0001g0022	0/0	2	0	0	2	0	0	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
a0001c0001t0001g0024	0/0	1	0	0	1	0	0	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
a0001c0001t0001g0025	0/0	1	0	0	1	0	0	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
a0001c0001t0001g0026	0/0	1	0	0	1	0	0	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
a0001c0001t0001g0030	0/0	1	0	0	1	0	0	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
a0001c0001t0001g0031	0/0	1	0	0	1	0	0	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
a0001c0001t0001g0036	0/0	1	1	0	0	0	0	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
a0001c0001t0001g0037	0/0	1	0	0	1	0	0	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
a0001c0001t0001g0038	0/0	1	0	0	0	0	1	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
a0001c0001t0001g0039	0/0	1	1	0	0	0	0	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
a0001c0001t0001g0040	0/0	1	1	0	0	0	0	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
a0001c0001t0001g0041	0/0	1	1	0	0	0	0	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
a0001c0001t0002g0013	0/0	3	3	0	0	0	0	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
a0001c0002t0001g0002	0/0	32	5	13	11	1	2	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
a0001c0002t0001g0016	0/0	2	0	0	2	0	0	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
a0001c0002t0001g0028	0/0	1	0	1	0	0	0	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
a0001c0005t0001g0018	0/0	2	0	2	0	0	0	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
a0001c0006t0001g0032	0/0	1	0	0	0	0	1	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
a0001c0007t0001g0042	0/0	1	0	0	0	0	1	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
a0001c0008t0001g0029	0/0	1	1	0	0	0	0	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
a0001c0011t0001g0034	0/0	1	1	0	0	0	0	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
a0001c0013t0001g0035	0/0	1	1	0	0	0	0	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
a0002c0003t0001g0006	0/1	17	0	8	0	7	1	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
a0003c0004t0001g0019	0/0	2	2	0	0	0	0	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
a0003c0004t0001g0021	0/0	2	2	0	0	0	0	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
a0004c0009t0001g0027	0/0	1	0	0	1	0	0	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
a0005c0012t0001g0023	0/0	1	1	0	0	0	0	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
a0006c0010t0001g0033	0/0	1	0	0	1	0	0	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453

sampleid	ID haplotypeid	ahapid	chapid	thapid	ghapid	gpopname	popname	regionname	genename	chr	start	end
HG00099	hp1	a0002	c0003	t0001	g0006	EUR	GBR	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
HG00099	hp2	a0001	c0001	t0001	g0001	EUR	GBR	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
HG00140	hp1	a0002	c0003	t0001	g0006	EUR	GBR	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
HG00280	hp1	a0002	c0003	t0001	g0006	EUR	FIN	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
HG00323	hp1	a0001	c0001	t0001	g0003	EUR	FIN	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
HG00323	hp2	a0001	c0002	t0001	g0002	EUR	FIN	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
HG00408	hp1	a0001	c0002	t0001	g0002	EAS	CHS	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
HG00408	hp2	a0001	c0001	t0001	g0001	EAS	CHS	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
HG00423	hp1	a0001	c0002	t0001	g0002	EAS	CHS	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
HG00423	hp2	a0001	c0002	t0001	g0002	EAS	CHS	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
HG00544	hp1	a0001	c0001	t0001	g0037	EAS	CHS	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
HG00544	hp2	a0004	c0009	t0001	g0027	EAS	CHS	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
HG00597	hp1	a0001	c0001	t0001	g0005	EAS	CHS	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
HG00597	hp2	a0001	c0001	t0001	g0005	EAS	CHS	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
HG00609	hp1	a0001	c0001	t0001	g0001	EAS	CHS	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
HG00621	hp1	a0001	c0001	t0001	g0005	EAS	CHS	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
HG00639	hp1	a0001	c0001	t0001	g0001	AMR	PUR	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
HG00639	hp2	a0001	c0002	t0001	g0002	AMR	PUR	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
HG00642	hp1	a0001	c0001	t0001	g0001	AMR	PUR	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
HG00673	hp1	a0001	c0001	t0001	g0001	EAS	CHS	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
HG00733	hp1	a0001	c0001	t0001	g0001	AMR	PUR	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
HG00733	hp2	a0001	c0001	t0001	g0003	AMR	PUR	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
HG00735	hp1	a0001	c0001	t0001	g0012	AMR	PUR	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
HG00735	hp2	a0001	c0001	t0001	g0003	AMR	PUR	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
HG00738	hp1	a0001	c0001	t0001	g0011	AMR	PUR	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
HG00741	hp1	a0001	c0001	t0001	g0001	AMR	PUR	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
HG00741	hp2	a0001	c0001	t0001	g0017	AMR	PUR	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
HG01069	hp1	a0001	c0001	t0001	g0014	AMR	PUR	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
HG01070	hp1	a0001	c0001	t0001	g0001	AMR	PUR	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
HG01070	hp2	a0002	c0003	t0001	g0006	AMR	PUR	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
HG01071	hp1	a0001	c0001	t0001	g0014	AMR	PUR	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
HG01071	hp2	a0002	c0003	t0001	g0006	AMR	PUR	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
HG01074	hp1	a0002	c0003	t0001	g0006	AMR	PUR	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
HG01081	hp1	a0001	c0001	t0001	g0004	AMR	PUR	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
HG01081	hp2	a0001	c0001	t0001	g0008	AMR	PUR	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
HG01099	hp1	a0002	c0003	t0001	g0006	AMR	PUR	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
HG01106	hp1	a0002	c0003	t0001	g0006	AMR	PUR	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
HG01109	hp1	a0001	c0001	t0001	g0014	AMR	PUR	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
HG01167	hp1	a0001	c0005	t0001	g0018	AMR	PUR	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
HG01169	hp1	a0001	c0005	t0001	g0018	AMR	PUR	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
HG01169	hp2	a0001	c0001	t0001	g0001	AMR	PUR	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
HG01175	hp1	a0001	c0001	t0001	g0001	AMR	PUR	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
HG01175	hp2	a0001	c0001	t0001	g0017	AMR	PUR	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
HG01192	hp1	a0002	c0003	t0001	g0006	AMR	PUR	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
HG01243	hp1	a0001	c0001	t0001	g0001	AMR	PUR	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
HG01255	hp1	a0001	c0001	t0001	g0007	AMR	CLM	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
HG01256	hp1	a0001	c0002	t0001	g0002	AMR	CLM	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
HG01258	hp1	a0001	c0001	t0001	g0001	AMR	CLM	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
HG01261	hp1	a0001	c0001	t0001	g0005	AMR	CLM	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
HG01346	hp1	a0002	c0003	t0001	g0006	AMR	CLM	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
HG01346	hp2	a0001	c0001	t0001	g0003	AMR	CLM	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
HG01358	hp1	a0002	c0003	t0001	g0006	AMR	CLM	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
HG01361	hp1	a0001	c0001	t0001	g0001	AMR	CLM	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
HG01361	hp2	a0001	c0001	t0001	g0001	AMR	CLM	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
HG01433	hp1	a0001	c0001	t0001	g0001	AMR	CLM	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
HG01496	hp1	a0001	c0001	t0001	g0001	AMR	CLM	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
HG01496	hp2	a0001	c0001	t0001	g0005	AMR	CLM	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
HG01515	hp1	a0002	c0003	t0001	g0006	EUR	IBS	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
HG01516	hp1	a0002	c0003	t0001	g0006	EUR	IBS	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
HG01516	hp2	a0001	c0001	t0001	g0003	EUR	IBS	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
HG01517	hp1	a0002	c0003	t0001	g0006	EUR	IBS	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
HG01517	hp2	a0002	c0003	t0001	g0006	EUR	IBS	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
HG01884	hp1	a0003	c0004	t0001	g0019	AFR	ACB	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
HG01884	hp2	a0001	c0001	t0001	g0004	AFR	ACB	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
HG01928	hp1	a0001	c0002	t0001	g0002	AMR	PEL	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
HG01934	hp1	a0001	c0001	t0001	g0005	AMR	PEL	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
HG01943	hp1	a0001	c0002	t0001	g0002	AMR	PEL	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
HG01952	hp1	a0001	c0001	t0001	g0001	AMR	PEL	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
HG01975	hp1	a0001	c0002	t0001	g0002	AMR	PEL	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
HG01975	hp2	a0001	c0002	t0001	g0002	AMR	PEL	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
HG01978	hp1	a0001	c0002	t0001	g0002	AMR	PEL	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
HG01978	hp2	a0001	c0002	t0001	g0002	AMR	PEL	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
HG01981	hp1	a0001	c0001	t0001	g0001	AMR	PEL	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
HG01981	hp2	a0001	c0002	t0001	g0002	AMR	PEL	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
HG01993	hp1	a0001	c0002	t0001	g0002	AMR	PEL	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
HG01993	hp2	a0001	c0001	t0001	g0001	AMR	PEL	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
HG02004	hp1	a0001	c0002	t0001	g0002	AMR	PEL	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
HG02004	hp2	a0001	c0001	t0001	g0001	AMR	PEL	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
HG02015	hp1	a0001	c0001	t0001	g0001	EAS	KHV	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
HG02027	hp1	a0001	c0002	t0001	g0002	EAS	KHV	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
HG02040	hp1	a0001	c0002	t0001	g0002	EAS	KHV	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
HG02055	hp1	a0001	c0002	t0001	g0002	AFR	ACB	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
HG02056	hp1	a0001	c0001	t0001	g0007	EAS	KHV	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
HG02071	hp1	a0001	c0001	t0001	g0001	EAS	KHV	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
HG02074	hp1	a0001	c0001	t0001	g0001	EAS	KHV	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
HG02080	hp1	a0001	c0001	t0001	g0001	EAS	KHV	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
HG02080	hp2	a0001	c0001	t0001	g0001	EAS	KHV	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
HG02083	hp1	a0001	c0001	t0001	g0009	EAS	KHV	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
HG02129	hp1	a0001	c0001	t0001	g0001	EAS	KHV	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
HG02132	hp1	a0001	c0001	t0001	g0001	EAS	KHV	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
HG02135	hp1	a0001	c0001	t0001	g0001	EAS	KHV	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
HG02145	hp1	a0001	c0001	t0001	g0015	AFR	ACB	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
HG02148	hp1	a0001	c0001	t0001	g0001	AMR	PEL	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
HG02148	hp2	a0001	c0002	t0001	g0002	AMR	PEL	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
HG02155	hp1	a0001	c0001	t0001	g0012	EAS	CDX	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
HG02155	hp2	a0001	c0001	t0001	g0001	EAS	CDX	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
HG02165	hp1	a0001	c0001	t0001	g0001	EAS	CDX	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
HG02165	hp2	a0001	c0001	t0001	g0001	EAS	CDX	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
HG02257	hp1	a0003	c0004	t0001	g0021	AFR	ACB	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
HG02257	hp2	a0001	c0001	t0001	g0004	AFR	ACB	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
HG02258	hp1	a0001	c0001	t0001	g0004	AFR	ACB	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
HG02273	hp1	a0001	c0002	t0001	g0002	AMR	PEL	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
HG02273	hp2	a0001	c0002	t0001	g0028	AMR	PEL	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
HG02280	hp1	a0001	c0001	t0001	g0001	AFR	ACB	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
HG02280	hp2	a0001	c0001	t0002	g0013	AFR	ACB	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
HG02451	hp1	a0001	c0001	t0001	g0007	AFR	ACB	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
HG02451	hp2	a0001	c0001	t0001	g0007	AFR	ACB	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
HG02523	hp1	a0001	c0002	t0001	g0016	EAS	KHV	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
HG02523	hp2	a0001	c0001	t0001	g0001	EAS	KHV	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
HG02572	hp1	a0001	c0001	t0001	g0008	AFR	GWD	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
HG02602	hp1	a0001	c0001	t0001	g0001	SAS	PJL	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
HG02615	hp1	a0001	c0001	t0001	g0003	AFR	GWD	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
HG02615	hp2	a0001	c0001	t0001	g0007	AFR	GWD	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
HG02622	hp1	a0001	c0001	t0001	g0008	AFR	GWD	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
HG02622	hp2	a0001	c0001	t0001	g0008	AFR	GWD	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
HG02630	hp1	a0001	c0001	t0001	g0004	AFR	GWD	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
HG02630	hp2	a0001	c0001	t0001	g0004	AFR	GWD	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
HG02647	hp1	a0003	c0004	t0001	g0021	AFR	GWD	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
HG02683	hp1	a0001	c0001	t0001	g0003	SAS	PJL	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
HG02683	hp2	a0001	c0001	t0001	g0001	SAS	PJL	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
HG02698	hp1	a0001	c0001	t0001	g0001	SAS	PJL	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
HG02717	hp1	a0001	c0001	t0001	g0004	AFR	GWD	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
HG02723	hp1	a0001	c0001	t0001	g0007	AFR	GWD	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
HG02723	hp2	a0001	c0001	t0001	g0001	AFR	GWD	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
HG02735	hp1	a0001	c0007	t0001	g0042	SAS	PJL	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
HG02738	hp1	a0001	c0001	t0001	g0001	SAS	PJL	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
HG02809	hp1	a0001	c0001	t0001	g0008	AFR	GWD	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
HG02809	hp2	a0001	c0001	t0001	g0003	AFR	GWD	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
HG02818	hp1	a0001	c0001	t0001	g0007	AFR	GWD	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
HG02818	hp2	a0001	c0001	t0001	g0003	AFR	GWD	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
HG02886	hp1	a0001	c0011	t0001	g0034	AFR	GWD	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
HG02886	hp2	a0001	c0001	t0001	g0015	AFR	GWD	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
HG02895	hp1	a0001	c0001	t0001	g0004	AFR	GWD	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
HG02896	hp1	a0001	c0001	t0001	g0020	AFR	GWD	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
HG02896	hp2	a0001	c0001	t0002	g0013	AFR	GWD	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
HG02897	hp1	a0001	c0001	t0001	g0004	AFR	GWD	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
HG02897	hp2	a0001	c0001	t0001	g0020	AFR	GWD	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
HG02965	hp1	a0001	c0001	t0001	g0004	AFR	ESN	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
HG02970	hp1	a0001	c0002	t0001	g0002	AFR	ESN	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
HG02970	hp2	a0001	c0001	t0001	g0041	AFR	ESN	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
HG02976	hp1	a0003	c0004	t0001	g0019	AFR	ESN	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
HG02976	hp2	a0001	c0001	t0001	g0039	AFR	ESN	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
HG03017	hp1	a0001	c0001	t0001	g0001	SAS	PJL	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
HG03041	hp1	a0001	c0001	t0001	g0001	AFR	GWD	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
HG03041	hp2	a0001	c0001	t0001	g0004	AFR	GWD	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
HG03098	hp1	a0001	c0001	t0001	g0004	AFR	MSL	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
HG03130	hp1	a0001	c0001	t0001	g0008	AFR	ESN	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
HG03139	hp1	a0001	c0001	t0001	g0004	AFR	ESN	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
HG03195	hp1	a0001	c0001	t0001	g0007	AFR	ESN	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
HG03195	hp2	a0001	c0001	t0001	g0007	AFR	ESN	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
HG03209	hp1	a0001	c0008	t0001	g0029	AFR	MSL	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
HG03225	hp1	a0001	c0001	t0001	g0004	AFR	MSL	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
HG03239	hp1	a0001	c0002	t0001	g0002	SAS	PJL	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
HG03239	hp2	a0001	c0006	t0001	g0032	SAS	PJL	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
HG03453	hp1	a0001	c0001	t0002	g0013	AFR	MSL	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
HG03453	hp2	a0001	c0001	t0001	g0007	AFR	MSL	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
HG03486	hp1	a0001	c0001	t0001	g0011	AFR	MSL	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
HG03486	hp2	a0001	c0001	t0001	g0001	AFR	MSL	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
HG03490	hp1	a0001	c0001	t0001	g0001	SAS	PJL	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
HG03491	hp1	a0002	c0003	t0001	g0006	SAS	PJL	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
HG03491	hp2	a0001	c0001	t0001	g0001	SAS	PJL	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
HG03492	hp1	a0001	c0001	t0001	g0001	SAS	PJL	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
HG03516	hp1	a0001	c0001	t0001	g0012	AFR	ESN	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
HG03516	hp2	a0001	c0001	t0001	g0004	AFR	ESN	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
HG03540	hp1	a0001	c0001	t0001	g0003	AFR	GWD	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
HG03540	hp2	a0001	c0001	t0001	g0004	AFR	GWD	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
HG03579	hp1	a0001	c0001	t0001	g0011	AFR	MSL	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
HG03654	hp1	a0001	c0001	t0001	g0001	SAS	PJL	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
HG03669	hp1	a0001	c0001	t0001	g0038	SAS	PJL	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
HG03669	hp2	a0001	c0001	t0001	g0003	SAS	PJL	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
HG03688	hp1	a0001	c0001	t0001	g0001	SAS	STU	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
HG03704	hp1	a0001	c0001	t0001	g0001	SAS	PJL	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
HG03704	hp2	a0001	c0001	t0001	g0001	SAS	PJL	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
HG03710	hp1	a0001	c0001	t0001	g0001	SAS	PJL	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
HG03831	hp1	a0001	c0001	t0001	g0001	SAS	BEB	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
HG03831	hp2	a0001	c0002	t0001	g0002	SAS	BEB	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
HG03834	hp1	a0001	c0001	t0001	g0001	SAS	BEB	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
HG03834	hp2	a0001	c0001	t0001	g0001	SAS	BEB	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
HG03927	hp1	a0001	c0001	t0001	g0003	SAS	BEB	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
HG03927	hp2	a0001	c0001	t0001	g0001	SAS	BEB	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
HG03942	hp1	a0001	c0001	t0001	g0001	SAS	BEB	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
HG04115	hp1	a0001	c0001	t0001	g0001	SAS	STU	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
HG04184	hp1	a0001	c0001	t0001	g0001	SAS	BEB	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
HG04184	hp2	a0001	c0001	t0001	g0001	SAS	BEB	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
HG04199	hp1	a0001	c0001	t0001	g0001	SAS	STU	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
HG04204	hp1	a0001	c0001	t0001	g0003	SAS	STU	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
HG04228	hp1	a0001	c0001	t0001	g0001	SAS	STU	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
NA18522	hp1	a0001	c0001	t0001	g0007	AFR	YRI	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
NA18612	hp1	a0001	c0001	t0001	g0001	EAS	CHB	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
NA18747	hp1	a0001	c0001	t0001	g0001	EAS	CHB	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
NA18906	hp1	a0001	c0001	t0001	g0012	AFR	YRI	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
NA18906	hp2	a0001	c0001	t0001	g0011	AFR	YRI	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
NA18939	hp1	a0001	c0001	t0001	g0009	EAS	JPT	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
NA18939	hp2	a0001	c0001	t0001	g0001	EAS	JPT	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
NA18940	hp1	a0001	c0002	t0001	g0002	EAS	JPT	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
NA18941	hp1	a0001	c0001	t0001	g0001	EAS	JPT	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
NA18941	hp2	a0001	c0001	t0001	g0005	EAS	JPT	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
NA18943	hp1	a0001	c0001	t0001	g0001	EAS	JPT	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
NA18944	hp1	a0001	c0001	t0001	g0001	EAS	JPT	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
NA18945	hp1	a0001	c0001	t0001	g0001	EAS	JPT	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
NA18947	hp1	a0001	c0001	t0001	g0010	EAS	JPT	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
NA18947	hp2	a0001	c0001	t0001	g0001	EAS	JPT	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
NA18948	hp1	a0001	c0001	t0001	g0003	EAS	JPT	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
NA18949	hp1	a0001	c0001	t0001	g0001	EAS	JPT	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
NA18949	hp2	a0001	c0001	t0001	g0001	EAS	JPT	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
NA18950	hp1	a0001	c0001	t0001	g0001	EAS	JPT	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
NA18950	hp2	a0001	c0001	t0001	g0001	EAS	JPT	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
NA18951	hp1	a0001	c0001	t0001	g0005	EAS	JPT	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
NA18951	hp2	a0001	c0001	t0001	g0003	EAS	JPT	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
NA18952	hp1	a0001	c0001	t0001	g0001	EAS	JPT	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
NA18953	hp1	a0001	c0001	t0001	g0009	EAS	JPT	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
NA18954	hp1	a0001	c0001	t0001	g0001	EAS	JPT	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
NA18954	hp2	a0001	c0001	t0001	g0010	EAS	JPT	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
NA18956	hp1	a0001	c0001	t0001	g0010	EAS	JPT	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
NA18956	hp2	a0001	c0001	t0001	g0001	EAS	JPT	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
NA18960	hp1	a0001	c0001	t0001	g0005	EAS	JPT	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
NA18961	hp1	a0001	c0001	t0001	g0001	EAS	JPT	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
NA18962	hp1	a0001	c0002	t0001	g0002	EAS	JPT	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
NA18963	hp1	a0001	c0001	t0001	g0001	EAS	JPT	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
NA18963	hp2	a0001	c0001	t0001	g0010	EAS	JPT	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
NA18965	hp1	a0001	c0001	t0001	g0001	EAS	JPT	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
NA18966	hp1	a0001	c0001	t0001	g0026	EAS	JPT	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
NA18967	hp1	a0001	c0001	t0001	g0022	EAS	JPT	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
NA18968	hp1	a0001	c0001	t0001	g0001	EAS	JPT	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
NA18968	hp2	a0001	c0001	t0001	g0022	EAS	JPT	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
NA18970	hp1	a0001	c0001	t0001	g0001	EAS	JPT	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
NA18971	hp1	a0001	c0001	t0001	g0001	EAS	JPT	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
NA18973	hp1	a0001	c0001	t0001	g0003	EAS	JPT	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
NA18973	hp2	a0001	c0001	t0001	g0001	EAS	JPT	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
NA18974	hp1	a0001	c0001	t0001	g0001	EAS	JPT	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
NA18975	hp1	a0001	c0001	t0001	g0001	EAS	JPT	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
NA18975	hp2	a0001	c0001	t0001	g0001	EAS	JPT	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
NA18977	hp1	a0001	c0001	t0001	g0007	EAS	JPT	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
NA18979	hp1	a0001	c0001	t0001	g0001	EAS	JPT	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
NA18979	hp2	a0001	c0001	t0001	g0001	EAS	JPT	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
NA18980	hp1	a0001	c0001	t0001	g0010	EAS	JPT	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
NA18980	hp2	a0001	c0001	t0001	g0001	EAS	JPT	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
NA18981	hp1	a0001	c0001	t0001	g0025	EAS	JPT	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
NA18981	hp2	a0001	c0001	t0001	g0001	EAS	JPT	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
NA18982	hp1	a0001	c0001	t0001	g0007	EAS	JPT	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
NA18983	hp1	a0001	c0001	t0001	g0001	EAS	JPT	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
NA18984	hp1	a0001	c0001	t0001	g0001	EAS	JPT	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
NA18985	hp1	a0001	c0001	t0001	g0005	EAS	JPT	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
NA18986	hp1	a0001	c0002	t0001	g0002	EAS	JPT	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
NA18988	hp1	a0001	c0001	t0001	g0001	EAS	JPT	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
NA18989	hp1	a0001	c0001	t0001	g0001	EAS	JPT	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
NA18990	hp1	a0001	c0001	t0001	g0001	EAS	JPT	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
NA18991	hp1	a0001	c0001	t0001	g0001	EAS	JPT	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
NA18991	hp2	a0001	c0001	t0001	g0005	EAS	JPT	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
NA18993	hp1	a0001	c0001	t0001	g0030	EAS	JPT	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
NA18993	hp2	a0001	c0001	t0001	g0005	EAS	JPT	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
NA18994	hp1	a0001	c0001	t0001	g0001	EAS	JPT	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
NA18995	hp1	a0001	c0002	t0001	g0002	EAS	JPT	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
NA18998	hp1	a0001	c0001	t0001	g0005	EAS	JPT	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
NA18998	hp2	a0001	c0001	t0001	g0024	EAS	JPT	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
NA18999	hp1	a0001	c0001	t0001	g0001	EAS	JPT	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
NA18999	hp2	a0001	c0001	t0001	g0008	EAS	JPT	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
NA19000	hp1	a0001	c0001	t0001	g0001	EAS	JPT	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
NA19003	hp1	a0001	c0001	t0001	g0001	EAS	JPT	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
NA19003	hp2	a0001	c0001	t0001	g0001	EAS	JPT	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
NA19004	hp1	a0001	c0001	t0001	g0001	EAS	JPT	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
NA19005	hp1	a0001	c0001	t0001	g0001	EAS	JPT	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
NA19006	hp1	a0001	c0001	t0001	g0003	EAS	JPT	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
NA19007	hp1	a0001	c0001	t0001	g0001	EAS	JPT	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
NA19009	hp1	a0001	c0001	t0001	g0001	EAS	JPT	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
NA19010	hp1	a0001	c0001	t0001	g0001	EAS	JPT	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
NA19010	hp2	a0001	c0001	t0001	g0003	EAS	JPT	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
NA19011	hp1	a0001	c0001	t0001	g0001	EAS	JPT	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
NA19011	hp2	a0001	c0001	t0001	g0005	EAS	JPT	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
NA19012	hp1	a0001	c0001	t0001	g0003	EAS	JPT	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
NA19030	hp1	a0001	c0001	t0001	g0040	AFR	LWK	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
NA19030	hp2	a0001	c0001	t0001	g0007	AFR	LWK	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
NA19043	hp1	a0001	c0001	t0001	g0004	AFR	LWK	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
NA19055	hp1	a0001	c0001	t0001	g0001	EAS	JPT	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
NA19056	hp1	a0001	c0001	t0001	g0001	EAS	JPT	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
NA19057	hp1	a0001	c0001	t0001	g0031	EAS	JPT	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
NA19057	hp2	a0001	c0001	t0001	g0001	EAS	JPT	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
NA19058	hp1	a0001	c0001	t0001	g0001	EAS	JPT	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
NA19060	hp1	a0001	c0001	t0001	g0003	EAS	JPT	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
NA19062	hp1	a0001	c0001	t0001	g0001	EAS	JPT	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
NA19063	hp1	a0001	c0001	t0001	g0001	EAS	JPT	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
NA19064	hp1	a0001	c0001	t0001	g0001	EAS	JPT	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
NA19064	hp2	a0001	c0001	t0001	g0001	EAS	JPT	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
NA19065	hp1	a0001	c0001	t0001	g0001	EAS	JPT	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
NA19065	hp2	a0001	c0001	t0001	g0001	EAS	JPT	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
NA19066	hp1	a0001	c0001	t0001	g0001	EAS	JPT	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
NA19067	hp1	a0001	c0001	t0001	g0009	EAS	JPT	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
NA19068	hp1	a0001	c0001	t0001	g0001	EAS	JPT	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
NA19070	hp1	a0001	c0001	t0001	g0005	EAS	JPT	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
NA19072	hp1	a0006	c0010	t0001	g0033	EAS	JPT	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
NA19075	hp1	a0001	c0001	t0001	g0001	EAS	JPT	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
NA19076	hp1	a0001	c0001	t0001	g0001	EAS	JPT	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
NA19077	hp1	a0001	c0002	t0001	g0002	EAS	JPT	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
NA19077	hp2	a0001	c0001	t0001	g0001	EAS	JPT	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
NA19078	hp1	a0001	c0001	t0001	g0001	EAS	JPT	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
NA19078	hp2	a0001	c0002	t0001	g0016	EAS	JPT	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
NA19079	hp1	a0001	c0001	t0001	g0005	EAS	JPT	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
NA19080	hp1	a0001	c0001	t0001	g0001	EAS	JPT	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
NA19080	hp2	a0001	c0001	t0001	g0005	EAS	JPT	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
NA19082	hp1	a0001	c0001	t0001	g0005	EAS	JPT	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
NA19083	hp1	a0001	c0001	t0001	g0005	EAS	JPT	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
NA19084	hp1	a0001	c0001	t0001	g0001	EAS	JPT	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
NA19084	hp2	a0001	c0001	t0001	g0005	EAS	JPT	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
NA19085	hp1	a0001	c0002	t0001	g0002	EAS	JPT	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
NA19086	hp1	a0001	c0001	t0001	g0003	EAS	JPT	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
NA19087	hp1	a0001	c0001	t0001	g0009	EAS	JPT	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
NA19087	hp2	a0001	c0001	t0001	g0001	EAS	JPT	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
NA19088	hp1	a0001	c0001	t0001	g0001	EAS	JPT	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
NA19089	hp1	a0001	c0001	t0001	g0001	EAS	JPT	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
NA19091	hp1	a0001	c0001	t0001	g0001	EAS	JPT	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
NA19240	hp1	a0001	c0001	t0001	g0004	AFR	YRI	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
NA19240	hp2	a0001	c0002	t0001	g0002	AFR	YRI	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
NA20129	hp1	a0001	c0001	t0001	g0008	AFR	ASW	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
NA20129	hp2	a0001	c0001	t0001	g0007	AFR	ASW	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
NA20752	hp1	a0001	c0001	t0001	g0001	EUR	TSI	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
NA20805	hp1	a0001	c0001	t0001	g0001	EUR	TSI	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
NA20905	hp1	a0001	c0001	t0001	g0001	SAS	GIH	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
HG01123	hp1	a0001	c0001	t0001	g0001	AMR	CLM	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
HG01123	hp2	a0001	c0001	t0001	g0001	AMR	CLM	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
HG02109	hp1	a0001	c0001	t0001	g0003	AFR	ACB	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
HG02109	hp2	a0001	c0001	t0001	g0007	AFR	ACB	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
HG02486	hp1	a0001	c0001	t0001	g0004	AFR	ACB	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
HG02559	hp1	a0001	c0001	t0001	g0036	AFR	ACB	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
HG02559	hp2	a0001	c0001	t0001	g0008	AFR	ACB	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
HG03471	hp1	a0001	c0001	t0001	g0003	AFR	MSL	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
HG06807	hp1	a0001	c0013	t0001	g0035	AFR	USA	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
HG06807	hp2	a0001	c0002	t0001	g0002	AFR	USA	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
NA18955	hp1	a0001	c0001	t0001	g0001	EAS	JPT	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
NA20300	hp1	a0001	c0002	t0001	g0002	AFR	USA	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
NA20300	hp2	a0001	c0001	t0001	g0003	AFR	USA	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
NA21309	hp1	a0005	c0012	t0001	g0023	AFR	LWK	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
NA21309	hp2	a0001	c0001	t0001	g0001	AFR	LWK	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
homoSapiens_chm13v2	hp1	a0002	c0003	t0001	g0006	REF	REF	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453
homoSapiens_grch38	hp1	a0001	c0001	t0001	g0004	REF	REF	PJA1_chrX_69155861_69170453	PJA1	chrX	69155861	69170453

chr:pos	ref	alt	# # of ahapid:amino-acid(protein) level	ahapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	hgvs_p	genename	geneid	featuretype	featureid	transcript_biotype	rank	cdna cdna pos length	cds cds pos length	aa aa pos length	chr	pos
chrX:69161421	C C	A A	1	a0002 a0002	17	HG00099.hp1 HG00140.hp1 HG00280.hp1 others(14): Show HG00099.hp1 HG00140.hp1 HG00280.hp1 HG01070.hp2 HG01071.hp2 HG01074.hp1 HG01099.hp1 HG01106.hp1 HG01192.hp1 HG01346.hp1 HG01358.hp1 HG01515.hp1 HG01516.hp1 HG01517.hp1 HG01517.hp2 HG03491.hp1 homoSapiens_chm13v2.hp1	missense_variant	MODERATE	c.1653G>T c.1653G>T	p.Glu551Asp p.Glu551Asp	PJA1	ENSG00000181191.12	transcript	ENST00000374571.5	protein_coding	2/2	1802/2362	1653/1767	551/588	chrX	69161421
chrX:69161811	A A	T T	1	a0006 a0006	1	NA19072.hp1 NA19072.hp1	missense_variant	MODERATE	c.1263T>A c.1263T>A	p.Asp421Glu p.Asp421Glu	PJA1	ENSG00000181191.12	transcript	ENST00000374571.5	protein_coding	2/2	1412/2362	1263/1767	421/588	chrX	69161811
chrX:69161812	T T	C C	1	a0006 a0006	1	NA19072.hp1 NA19072.hp1	missense_variant	MODERATE	c.1262A>G c.1262A>G	p.Asp421Gly p.Asp421Gly	PJA1	ENSG00000181191.12	transcript	ENST00000374571.5	protein_coding	2/2	1411/2362	1262/1767	421/588	chrX	69161812
chrX:69161813	C C	T T	1	a0006 a0006	1	NA19072.hp1 NA19072.hp1	missense_variant	MODERATE	c.1261G>A c.1261G>A	p.Asp421Asn p.Asp421Asn	PJA1	ENSG00000181191.12	transcript	ENST00000374571.5	protein_coding	2/2	1410/2362	1261/1767	421/588	chrX	69161813
chrX:69161944	C C	T T	2	a0002 a0003 a0002 a0003	21	HG00099.hp1 HG00140.hp1 HG00280.hp1 others(18): Show HG00099.hp1 HG00140.hp1 HG00280.hp1 HG01070.hp2 HG01071.hp2 HG01074.hp1 HG01099.hp1 HG01106.hp1 HG01192.hp1 HG01346.hp1 HG01358.hp1 HG01515.hp1 HG01516.hp1 HG01517.hp1 HG01517.hp2 HG01884.hp1 HG02257.hp1 HG02647.hp1 HG02976.hp1 HG03491.hp1 homoSapiens_chm13v2.hp1	missense_variant	MODERATE	c.1130G>A c.1130G>A	p.Ser377Asn p.Ser377Asn	PJA1	ENSG00000181191.12	transcript	ENST00000374571.5	protein_coding	2/2	1279/2362	1130/1767	377/588	chrX	69161944
chrX:69162074	T T	C C	1	a0005 a0005	1	NA21309.hp1 NA21309.hp1	missense_variant	MODERATE	c.1000A>G c.1000A>G	p.Ser334Gly p.Ser334Gly	PJA1	ENSG00000181191.12	transcript	ENST00000374571.5	protein_coding	2/2	1149/2362	1000/1767	334/588	chrX	69162074
chrX:69162112	C C	T T	1	a0004 a0004	1	HG00544.hp2 HG00544.hp2	missense_variant	MODERATE	c.962G>A c.962G>A	p.Arg321His p.Arg321His	PJA1	ENSG00000181191.12	transcript	ENST00000374571.5	protein_coding	2/2	1111/2362	962/1767	321/588	chrX	69162112

chr:pos	ref	alt	# # of chapid	chapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	hgvs_p	genename	geneid	featuretype	featureid	transcript_biotype	rank	cdna cdna pos length	cds cds pos length	aa aa pos length	chr	pos
chrX:69161982	G G	A A	1	a0001c0011 a0001c0011	1	HG02886.hp1 HG02886.hp1	synonymous_variant	LOW	c.1092C>T c.1092C>T	p.Pro364Pro p.Pro364Pro	PJA1	ENSG00000181191.12	transcript	ENST00000374571.5	protein_coding	2/2	1241/2362	1092/1767	364/588	chrX	69161982
chrX:69162069	G G	A A	3	a0001c0002 a0001c0008 a0005c0012 a0001c0002 a0001c0008 a0005c0012	37	HG00323.hp2 HG00408.hp1 HG00423.hp1 others(34): Show HG00323.hp2 HG00408.hp1 HG00423.hp1 HG00423.hp2 HG00639.hp2 HG01256.hp1 HG01928.hp1 HG01943.hp1 HG01975.hp1 HG01975.hp2 HG01978.hp1 HG01978.hp2 HG01981.hp2 HG01993.hp1 HG02004.hp1 HG02027.hp1 HG02040.hp1 HG02055.hp1 HG02148.hp2 HG02273.hp1 HG02273.hp2 HG02523.hp1 HG02970.hp1 HG03209.hp1 HG03239.hp1 HG03831.hp2 HG06807.hp2 NA18940.hp1 NA18962.hp1 NA18986.hp1 NA18995.hp1 NA19077.hp1 NA19078.hp2 NA19085.hp1 NA19240.hp2 NA20300.hp1 NA21309.hp1	synonymous_variant	LOW	c.1005C>T c.1005C>T	p.Gly335Gly p.Gly335Gly	PJA1	ENSG00000181191.12	transcript	ENST00000374571.5	protein_coding	2/2	1154/2362	1005/1767	335/588	chrX	69162069
chrX:69162399	A A	G G	2	a0001c0005 a0001c0008 a0001c0005 a0001c0008	3	HG01167.hp1 HG01169.hp1 HG03209.hp1 HG01167.hp1 HG01169.hp1 HG03209.hp1	synonymous_variant	LOW	c.675T>C c.675T>C	p.Asp225Asp p.Asp225Asp	PJA1	ENSG00000181191.12	transcript	ENST00000374571.5	protein_coding	2/2	824/2362	675/1767	225/588	chrX	69162399
chrX:69162510	A A	C C	1	a0001c0007 a0001c0007	1	HG02735.hp1 HG02735.hp1	synonymous_variant	LOW	c.564T>G c.564T>G	p.Gly188Gly p.Gly188Gly	PJA1	ENSG00000181191.12	transcript	ENST00000374571.5	protein_coding	2/2	713/2362	564/1767	188/588	chrX	69162510
chrX:69162579	C C	T T	1	a0001c0006 a0001c0006	1	HG03239.hp2 HG03239.hp2	synonymous_variant	LOW	c.495G>A c.495G>A	p.Ser165Ser p.Ser165Ser	PJA1	ENSG00000181191.12	transcript	ENST00000374571.5	protein_coding	2/2	644/2362	495/1767	165/588	chrX	69162579
chrX:69162993	G G	A A	2	a0002c0003 a0003c0004 a0002c0003 a0003c0004	21	HG00099.hp1 HG00140.hp1 HG00280.hp1 others(18): Show HG00099.hp1 HG00140.hp1 HG00280.hp1 HG01070.hp2 HG01071.hp2 HG01074.hp1 HG01099.hp1 HG01106.hp1 HG01192.hp1 HG01346.hp1 HG01358.hp1 HG01515.hp1 HG01516.hp1 HG01517.hp1 HG01517.hp2 HG01884.hp1 HG02257.hp1 HG02647.hp1 HG02976.hp1 HG03491.hp1 homoSapiens_chm13v2.hp1	synonymous_variant	LOW	c.81C>T c.81C>T	p.Ser27Ser p.Ser27Ser	PJA1	ENSG00000181191.12	transcript	ENST00000374571.5	protein_coding	2/2	230/2362	81/1767	27/588	chrX	69162993
chrX:69162999	G G	A A	1	a0001c0013 a0001c0013	1	HG06807.hp1 HG06807.hp1	synonymous_variant	LOW	c.75C>T c.75C>T	p.Asp25Asp p.Asp25Asp	PJA1	ENSG00000181191.12	transcript	ENST00000374571.5	protein_coding	2/2	224/2362	75/1767	25/588	chrX	69162999

chr:pos	ref	alt	# # of thapid:transcript level	thapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	hgvs_p	genename	geneid	featuretype	featureid	transcript_biotype	rank	cdna cdna pos length	cds cds pos length	aa aa pos length	distance	status	chr	pos
chrX:69160911	G G	C C	1	a0001c0001t0002 a0001c0001t0002	3	HG02280.hp2 HG02896.hp2 HG03453.hp1 HG02280.hp2 HG02896.hp2 HG03453.hp1	3_prime_UTR_variant	MODIFIER	c.396C>G c.396C>G		PJA1	ENSG00000181191.12	transcript	ENST00000374571.5	protein_coding	2/2				396		chrX	69160911

chr:pos	ref	alt	# # of ghapid:genebody level	ghapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	genename	geneid	featuretype	featureid	genebody_biotype	rank	chr	pos
chrX:69163383	A A	G G	1	a0001c0001t0001g0039 a0001c0001t0001g0039	1	HG02976.hp2 HG02976.hp2	intron_variant	MODIFIER	c.-67-243T>C c.-67-243T>C	PJA1	ENSG00000181191.12	transcript	ENST00000374571.5	protein_coding	1/1	chrX	69163383
chrX:69163398	G G	A A	1	a0001c0001t0001g0036 a0001c0001t0001g0036	1	HG02559.hp1 HG02559.hp1	intron_variant	MODIFIER	c.-67-258C>T c.-67-258C>T	PJA1	ENSG00000181191.12	transcript	ENST00000374571.5	protein_coding	1/1	chrX	69163398
chrX:69163400	C C	A A	1	a0001c0001t0001g0040 a0001c0001t0001g0040	1	NA19030.hp1 NA19030.hp1	intron_variant	MODIFIER	c.-67-260G>T c.-67-260G>T	PJA1	ENSG00000181191.12	transcript	ENST00000374571.5	protein_coding	1/1	chrX	69163400
chrX:69163553	T T	G G	1	a0001c0001t0001g0011 a0001c0001t0001g0011	4	HG00738.hp1 HG03486.hp1 HG03579.hp1 others(1): Show HG00738.hp1 HG03486.hp1 HG03579.hp1 NA18906.hp2	intron_variant	MODIFIER	c.-67-413A>C c.-67-413A>C	PJA1	ENSG00000181191.12	transcript	ENST00000374571.5	protein_coding	1/1	chrX	69163553
chrX:69163568	C C	T T	1	a0001c0001t0001g0031 a0001c0001t0001g0031	1	NA19057.hp1 NA19057.hp1	intron_variant	MODIFIER	c.-67-428G>A c.-67-428G>A	PJA1	ENSG00000181191.12	transcript	ENST00000374571.5	protein_coding	1/1	chrX	69163568
chrX:69163694	G G	T T	1	a0001c0002t0001g0028 a0001c0002t0001g0028	1	HG02273.hp2 HG02273.hp2	intron_variant	MODIFIER	c.-67-554C>A c.-67-554C>A	PJA1	ENSG00000181191.12	transcript	ENST00000374571.5	protein_coding	1/1	chrX	69163694
chrX:69163784	G G	A A	1	a0001c0001t0001g0011 a0001c0001t0001g0011	4	HG00738.hp1 HG03486.hp1 HG03579.hp1 others(1): Show HG00738.hp1 HG03486.hp1 HG03579.hp1 NA18906.hp2	intron_variant	MODIFIER	c.-67-644C>T c.-67-644C>T	PJA1	ENSG00000181191.12	transcript	ENST00000374571.5	protein_coding	1/1	chrX	69163784
chrX:69163841	A A	G G	1	a0001c0001t0001g0017 a0001c0001t0001g0017	2	HG00741.hp2 HG01175.hp2 HG00741.hp2 HG01175.hp2	intron_variant	MODIFIER	c.-67-701T>C c.-67-701T>C	PJA1	ENSG00000181191.12	transcript	ENST00000374571.5	protein_coding	1/1	chrX	69163841
chrX:69164137	C C	CG CG	1	a0001c0001t0001g0030 a0001c0001t0001g0030	1	NA18993.hp1 NA18993.hp1	intron_variant	MODIFIER	c.-67-998dupC c.-67-998dupC	PJA1	ENSG00000181191.12	transcript	ENST00000374571.5	protein_coding	1/1	chrX	69164137
chrX:69164143	T T	TG TG	4	a0001c0001t0001g0037 a0001c0001t0001g0040 a0001c0001t0001g0041 others(1): Show a0001c0001t0001g0037 a0001c0001t0001g0040 a0001c0001t0001g0041 a0001c0002t0001g0016	5	HG00544.hp1 HG02523.hp1 HG02970.hp2 others(2): Show HG00544.hp1 HG02523.hp1 HG02970.hp2 NA19030.hp1 NA19078.hp2	intron_variant	MODIFIER	c.-67-1004dupC c.-67-1004dupC	PJA1	ENSG00000181191.12	transcript	ENST00000374571.5	protein_coding	1/1	chrX	69164143
chrX:69164249	G G	A A	6	a0001c0001t0001g0005 a0001c0001t0001g0007 a0001c0001t0001g0036 others(3): Show a0001c0001t0001g0005 a0001c0001t0001g0007 a0001c0001t0001g0036 a0001c0001t0001g0041 a0001c0007t0001g0042 a0003c0004t0001g0019	41	HG00597.hp1 HG00597.hp2 HG00621.hp1 others(38): Show HG00597.hp1 HG00597.hp2 HG00621.hp1 HG01255.hp1 HG01261.hp1 HG01496.hp2 HG01884.hp1 HG01934.hp1 HG02056.hp1 HG02109.hp2 HG02451.hp1 HG02451.hp2 HG02559.hp1 HG02615.hp2 HG02723.hp1 HG02735.hp1 HG02818.hp1 HG02970.hp2 HG02976.hp1 HG03195.hp1 HG03195.hp2 HG03453.hp2 NA18522.hp1 NA18941.hp2 NA18951.hp1 NA18960.hp1 NA18977.hp1 NA18982.hp1 NA18985.hp1 NA18991.hp2 NA18993.hp2 NA18998.hp1 NA19011.hp2 NA19030.hp2 NA19070.hp1 NA19079.hp1 NA19080.hp2 NA19082.hp1 NA19083.hp1 NA19084.hp2 NA20129.hp2	intron_variant	MODIFIER	c.-67-1109C>T c.-67-1109C>T	PJA1	ENSG00000181191.12	transcript	ENST00000374571.5	protein_coding	1/1	chrX	69164249
chrX:69164282	C C	T T	17	a0001c0001t0001g0001 a0001c0001t0001g0009 a0001c0001t0001g0010 others(14): Show a0001c0001t0001g0001 a0001c0001t0001g0009 a0001c0001t0001g0010 a0001c0001t0001g0014 a0001c0001t0001g0017 a0001c0001t0001g0022 a0001c0001t0001g0024 a0001c0001t0001g0025 a0001c0001t0001g0026 a0001c0001t0001g0030 a0001c0001t0001g0031 a0001c0001t0001g0037 a0001c0001t0001g0038 a0001c0006t0001g0032 a0001c0011t0001g0034 a0004c0009t0001g0027 a0006c0010t0001g0033	164	HG00099.hp2 HG00408.hp2 HG00544.hp1 others(161): Show HG00099.hp2 HG00408.hp2 HG00544.hp1 HG00544.hp2 HG00609.hp1 HG00639.hp1 HG00642.hp1 HG00673.hp1 HG00733.hp1 HG00741.hp1 HG00741.hp2 HG01069.hp1 HG01070.hp1 HG01071.hp1 HG01109.hp1 HG01123.hp1 HG01123.hp2 HG01169.hp2 HG01175.hp1 HG01175.hp2 HG01243.hp1 HG01258.hp1 HG01361.hp1 HG01361.hp2 HG01433.hp1 HG01496.hp1 HG01952.hp1 HG01981.hp1 HG01993.hp2 HG02004.hp2 HG02015.hp1 HG02071.hp1 HG02074.hp1 HG02080.hp1 HG02080.hp2 HG02083.hp1 HG02129.hp1 HG02132.hp1 HG02135.hp1 HG02148.hp1 HG02155.hp2 HG02165.hp1 HG02165.hp2 HG02280.hp1 HG02523.hp2 HG02602.hp1 HG02683.hp2 HG02698.hp1 HG02723.hp2 HG02738.hp1 HG02886.hp1 HG03017.hp1 HG03041.hp1 HG03239.hp2 HG03486.hp2 HG03490.hp1 HG03491.hp2 HG03492.hp1 HG03654.hp1 HG03669.hp1 HG03688.hp1 HG03704.hp1 HG03704.hp2 HG03710.hp1 HG03831.hp1 HG03834.hp1 HG03834.hp2 HG03927.hp2 HG03942.hp1 HG04115.hp1 HG04184.hp1 HG04184.hp2 HG04199.hp1 HG04228.hp1 NA18612.hp1 NA18747.hp1 NA18939.hp1 NA18939.hp2 NA18941.hp1 NA18943.hp1 NA18944.hp1 NA18945.hp1 NA18947.hp1 NA18947.hp2 NA18949.hp1 NA18949.hp2 NA18950.hp1 NA18950.hp2 NA18952.hp1 NA18953.hp1 NA18954.hp1 NA18954.hp2 NA18955.hp1 NA18956.hp1 NA18956.hp2 NA18961.hp1 NA18963.hp1 NA18963.hp2 NA18965.hp1 NA18966.hp1 NA18967.hp1 NA18968.hp1 NA18968.hp2 NA18970.hp1 NA18971.hp1 NA18973.hp2 NA18974.hp1 NA18975.hp1 NA18975.hp2 NA18979.hp1 NA18979.hp2 NA18980.hp1 NA18980.hp2 NA18981.hp1 NA18981.hp2 NA18983.hp1 NA18984.hp1 NA18988.hp1 NA18989.hp1 NA18990.hp1 NA18991.hp1 NA18993.hp1 NA18994.hp1 NA18998.hp2 NA18999.hp1 NA19000.hp1 NA19003.hp1 NA19003.hp2 NA19004.hp1 NA19005.hp1 NA19007.hp1 NA19009.hp1 NA19010.hp1 NA19011.hp1 NA19055.hp1 NA19056.hp1 NA19057.hp1 NA19057.hp2 NA19058.hp1 NA19062.hp1 NA19063.hp1 NA19064.hp1 NA19064.hp2 NA19065.hp1 NA19065.hp2 NA19066.hp1 NA19067.hp1 NA19068.hp1 NA19072.hp1 NA19075.hp1 NA19076.hp1 NA19077.hp2 NA19078.hp1 NA19080.hp1 NA19084.hp1 NA19087.hp1 NA19087.hp2 NA19088.hp1 NA19089.hp1 NA19091.hp1 NA20752.hp1 NA20805.hp1 NA20905.hp1 NA21309.hp2	intron_variant	MODIFIER	c.-68+1090G>A c.-68+1090G>A	PJA1	ENSG00000181191.12	transcript	ENST00000374571.5	protein_coding	1/1	chrX	69164282
chrX:69164384	A A	G G	9	a0001c0001t0001g0009 a0001c0001t0001g0012 a0001c0001t0002g0013 others(6): Show a0001c0001t0001g0009 a0001c0001t0001g0012 a0001c0001t0002g0013 a0001c0002t0001g0002 a0001c0002t0001g0016 a0001c0002t0001g0028 a0001c0008t0001g0029 a0004c0009t0001g0027 a0005c0012t0001g0023	50	HG00323.hp2 HG00408.hp1 HG00423.hp1 others(47): Show HG00323.hp2 HG00408.hp1 HG00423.hp1 HG00423.hp2 HG00544.hp2 HG00639.hp2 HG00735.hp1 HG01256.hp1 HG01928.hp1 HG01943.hp1 HG01975.hp1 HG01975.hp2 HG01978.hp1 HG01978.hp2 HG01981.hp2 HG01993.hp1 HG02004.hp1 HG02027.hp1 HG02040.hp1 HG02055.hp1 HG02083.hp1 HG02148.hp2 HG02155.hp1 HG02273.hp1 HG02273.hp2 HG02280.hp2 HG02523.hp1 HG02896.hp2 HG02970.hp1 HG03209.hp1 HG03239.hp1 HG03453.hp1 HG03516.hp1 HG03831.hp2 HG06807.hp2 NA18906.hp1 NA18939.hp1 NA18940.hp1 NA18953.hp1 NA18962.hp1 NA18986.hp1 NA18995.hp1 NA19067.hp1 NA19077.hp1 NA19078.hp2 NA19085.hp1 NA19087.hp1 NA19240.hp2 NA20300.hp1 NA21309.hp1	intron_variant	MODIFIER	c.-68+988T>C c.-68+988T>C	PJA1	ENSG00000181191.12	transcript	ENST00000374571.5	protein_coding	1/1	chrX	69164384
chrX:69164416	C C	T T	1	a0001c0001t0001g0026 a0001c0001t0001g0026	1	NA18966.hp1 NA18966.hp1	intron_variant	MODIFIER	c.-68+956G>A c.-68+956G>A	PJA1	ENSG00000181191.12	transcript	ENST00000374571.5	protein_coding	1/1	chrX	69164416
chrX:69164488	T T	C C	2	a0001c0001t0001g0010 a0001c0001t0001g0037 a0001c0001t0001g0010 a0001c0001t0001g0037	6	HG00544.hp1 NA18947.hp1 NA18954.hp2 others(3): Show HG00544.hp1 NA18947.hp1 NA18954.hp2 NA18956.hp1 NA18963.hp2 NA18980.hp1	intron_variant	MODIFIER	c.-68+884A>G c.-68+884A>G	PJA1	ENSG00000181191.12	transcript	ENST00000374571.5	protein_coding	1/1	chrX	69164488
chrX:69164519	C C	G G	1	a0001c0001t0001g0025 a0001c0001t0001g0025	1	NA18981.hp1 NA18981.hp1	intron_variant	MODIFIER	c.-68+853G>C c.-68+853G>C	PJA1	ENSG00000181191.12	transcript	ENST00000374571.5	protein_coding	1/1	chrX	69164519
chrX:69164659	A A	C C	1	a0001c0001t0001g0020 a0001c0001t0001g0020	2	HG02896.hp1 HG02897.hp2 HG02896.hp1 HG02897.hp2	intron_variant	MODIFIER	c.-68+713T>G c.-68+713T>G	PJA1	ENSG00000181191.12	transcript	ENST00000374571.5	protein_coding	1/1	chrX	69164659
chrX:69164718	C C	CG CG	1	a0001c0001t0001g0024 a0001c0001t0001g0024	1	NA18998.hp2 NA18998.hp2	intron_variant	MODIFIER	c.-68+653dupC c.-68+653dupC	PJA1	ENSG00000181191.12	transcript	ENST00000374571.5	protein_coding	1/1	chrX	69164718
chrX:69164737	C C	G G	34	a0001c0001t0001g0001 a0001c0001t0001g0003 a0001c0001t0001g0005 others(31): Show a0001c0001t0001g0001 a0001c0001t0001g0003 a0001c0001t0001g0005 a0001c0001t0001g0007 a0001c0001t0001g0008 a0001c0001t0001g0009 a0001c0001t0001g0010 a0001c0001t0001g0011 a0001c0001t0001g0012 a0001c0001t0001g0014 a0001c0001t0001g0017 a0001c0001t0001g0022 a0001c0001t0001g0024 a0001c0001t0001g0025 a0001c0001t0001g0026 a0001c0001t0001g0030 a0001c0001t0001g0031 a0001c0001t0001g0036 a0001c0001t0001g0037 a0001c0001t0001g0041 a0001c0001t0002g0013 a0001c0002t0001g0002 a0001c0002t0001g0016 a0001c0002t0001g0028 a0001c0005t0001g0018 a0001c0006t0001g0032 a0001c0007t0001g0042 a0001c0008t0001g0029 a0001c0011t0001g0034 a0001c0013t0001g0035 a0003c0004t0001g0019 a0004c0009t0001g0027 a0005c0012t0001g0023 a0006c0010t0001g0033	288	HG00099.hp2 HG00323.hp1 HG00323.hp2 others(285): Show HG00099.hp2 HG00323.hp1 HG00323.hp2 HG00408.hp1 HG00408.hp2 HG00423.hp1 HG00423.hp2 HG00544.hp1 HG00544.hp2 HG00597.hp1 HG00597.hp2 HG00609.hp1 HG00621.hp1 HG00639.hp1 HG00639.hp2 HG00642.hp1 HG00673.hp1 HG00733.hp1 HG00733.hp2 HG00735.hp1 HG00735.hp2 HG00738.hp1 HG00741.hp1 HG00741.hp2 HG01069.hp1 HG01070.hp1 HG01071.hp1 HG01081.hp2 HG01109.hp1 HG01123.hp1 HG01123.hp2 HG01167.hp1 HG01169.hp1 HG01169.hp2 HG01175.hp1 HG01175.hp2 HG01243.hp1 HG01255.hp1 HG01256.hp1 HG01258.hp1 HG01261.hp1 HG01346.hp2 HG01361.hp1 HG01361.hp2 HG01433.hp1 HG01496.hp1 HG01496.hp2 HG01516.hp2 HG01884.hp1 HG01928.hp1 HG01934.hp1 HG01943.hp1 HG01952.hp1 HG01975.hp1 HG01975.hp2 HG01978.hp1 HG01978.hp2 HG01981.hp1 HG01981.hp2 HG01993.hp1 HG01993.hp2 HG02004.hp1 HG02004.hp2 HG02015.hp1 HG02027.hp1 HG02040.hp1 HG02055.hp1 HG02056.hp1 HG02071.hp1 HG02074.hp1 HG02080.hp1 HG02080.hp2 HG02083.hp1 HG02109.hp1 HG02109.hp2 HG02129.hp1 HG02132.hp1 HG02135.hp1 HG02148.hp1 HG02148.hp2 HG02155.hp1 HG02155.hp2 HG02165.hp1 HG02165.hp2 HG02273.hp1 HG02273.hp2 HG02280.hp1 HG02280.hp2 HG02451.hp1 HG02451.hp2 HG02523.hp1 HG02523.hp2 HG02559.hp1 HG02559.hp2 HG02572.hp1 HG02602.hp1 HG02615.hp1 HG02615.hp2 HG02622.hp1 HG02622.hp2 HG02683.hp1 HG02683.hp2 HG02698.hp1 HG02723.hp1 HG02723.hp2 HG02735.hp1 HG02738.hp1 HG02809.hp1 HG02809.hp2 HG02818.hp1 HG02818.hp2 HG02886.hp1 HG02896.hp2 HG02970.hp1 HG02970.hp2 HG02976.hp1 HG03017.hp1 HG03041.hp1 HG03130.hp1 HG03195.hp1 HG03195.hp2 HG03209.hp1 HG03239.hp1 HG03239.hp2 HG03453.hp1 HG03453.hp2 HG03471.hp1 HG03486.hp1 HG03486.hp2 HG03490.hp1 HG03491.hp2 HG03492.hp1 HG03516.hp1 HG03540.hp1 HG03579.hp1 HG03654.hp1 HG03669.hp2 HG03688.hp1 HG03704.hp1 HG03704.hp2 HG03710.hp1 HG03831.hp1 HG03831.hp2 HG03834.hp1 HG03834.hp2 HG03927.hp1 HG03927.hp2 HG03942.hp1 HG04115.hp1 HG04184.hp1 HG04184.hp2 HG04199.hp1 HG04204.hp1 HG04228.hp1 HG06807.hp1 HG06807.hp2 NA18522.hp1 NA18612.hp1 NA18747.hp1 NA18906.hp1 NA18906.hp2 NA18939.hp1 NA18939.hp2 NA18940.hp1 NA18941.hp1 NA18941.hp2 NA18943.hp1 NA18944.hp1 NA18945.hp1 NA18947.hp1 NA18947.hp2 NA18948.hp1 NA18949.hp1 NA18949.hp2 NA18950.hp1 NA18950.hp2 NA18951.hp1 NA18951.hp2 NA18952.hp1 NA18953.hp1 NA18954.hp1 NA18954.hp2 NA18955.hp1 NA18956.hp1 NA18956.hp2 NA18960.hp1 NA18961.hp1 NA18962.hp1 NA18963.hp1 NA18963.hp2 NA18965.hp1 NA18966.hp1 NA18967.hp1 NA18968.hp1 NA18968.hp2 NA18970.hp1 NA18971.hp1 NA18973.hp1 NA18973.hp2 NA18974.hp1 NA18975.hp1 NA18975.hp2 NA18977.hp1 NA18979.hp1 NA18979.hp2 NA18980.hp1 NA18980.hp2 NA18981.hp1 NA18981.hp2 NA18982.hp1 NA18983.hp1 NA18984.hp1 NA18985.hp1 NA18986.hp1 NA18988.hp1 NA18989.hp1 NA18990.hp1 NA18991.hp1 NA18991.hp2 NA18993.hp1 NA18993.hp2 NA18994.hp1 NA18995.hp1 NA18998.hp1 NA18998.hp2 NA18999.hp1 NA18999.hp2 NA19000.hp1 NA19003.hp1 NA19003.hp2 NA19004.hp1 NA19005.hp1 NA19006.hp1 NA19007.hp1 NA19009.hp1 NA19010.hp1 NA19010.hp2 NA19011.hp1 NA19011.hp2 NA19012.hp1 NA19030.hp2 NA19055.hp1 NA19056.hp1 NA19057.hp1 NA19057.hp2 NA19058.hp1 NA19060.hp1 NA19062.hp1 NA19063.hp1 NA19064.hp1 NA19064.hp2 NA19065.hp1 NA19065.hp2 NA19066.hp1 NA19067.hp1 NA19068.hp1 NA19070.hp1 NA19072.hp1 NA19075.hp1 NA19076.hp1 NA19077.hp1 NA19077.hp2 NA19078.hp1 NA19078.hp2 NA19079.hp1 NA19080.hp1 NA19080.hp2 NA19082.hp1 NA19083.hp1 NA19084.hp1 NA19084.hp2 NA19085.hp1 NA19086.hp1 NA19087.hp1 NA19087.hp2 NA19088.hp1 NA19089.hp1 NA19091.hp1 NA19240.hp2 NA20129.hp1 NA20129.hp2 NA20300.hp1 NA20300.hp2 NA20752.hp1 NA20805.hp1 NA20905.hp1 NA21309.hp1 NA21309.hp2	intron_variant	MODIFIER	c.-68+635G>C c.-68+635G>C	PJA1	ENSG00000181191.12	transcript	ENST00000374571.5	protein_coding	1/1	chrX	69164737
chrX:69164748	T T	TG TG	1	a0001c0001t0001g0041 a0001c0001t0001g0041	1	HG02970.hp2 HG02970.hp2	intron_variant	MODIFIER	c.-68+623dupC c.-68+623dupC	PJA1	ENSG00000181191.12	transcript	ENST00000374571.5	protein_coding	1/1	chrX	69164748
chrX:69164748	TG TG	T T	1	a0001c0001t0001g0015 a0001c0001t0001g0015	2	HG02145.hp1 HG02886.hp2 HG02145.hp1 HG02886.hp2	intron_variant	MODIFIER	c.-68+623delC c.-68+623delC	PJA1	ENSG00000181191.12	transcript	ENST00000374571.5	protein_coding	1/1	chrX	69164748
chrX:69164909	T T	C C	1	a0001c0001t0002g0013 a0001c0001t0002g0013	3	HG02280.hp2 HG02896.hp2 HG03453.hp1 HG02280.hp2 HG02896.hp2 HG03453.hp1	intron_variant	MODIFIER	c.-68+463A>G c.-68+463A>G	PJA1	ENSG00000181191.12	transcript	ENST00000374571.5	protein_coding	1/1	chrX	69164909
chrX:69164988	A A	C C	1	a0001c0001t0001g0011 a0001c0001t0001g0011	4	HG00738.hp1 HG03486.hp1 HG03579.hp1 others(1): Show HG00738.hp1 HG03486.hp1 HG03579.hp1 NA18906.hp2	intron_variant	MODIFIER	c.-68+384T>G c.-68+384T>G	PJA1	ENSG00000181191.12	transcript	ENST00000374571.5	protein_coding	1/1	chrX	69164988
chrX:69165152	A A	C C	1	a0005c0012t0001g0023 a0005c0012t0001g0023	1	NA21309.hp1 NA21309.hp1	intron_variant	MODIFIER	c.-68+220T>G c.-68+220T>G	PJA1	ENSG00000181191.12	transcript	ENST00000374571.5	protein_coding	1/1	chrX	69165152
chrX:69165281	CCCCCGTG others(12): Show CCCCCGTGCCCGGCCACTCG	C C	1	a0001c0001t0001g0014 a0001c0001t0001g0014	3	HG01069.hp1 HG01071.hp1 HG01109.hp1 HG01069.hp1 HG01071.hp1 HG01109.hp1	intron_variant	MODIFIER	c.-68+72_-68+90delCG others(17): Show c.-68+72_-68+90delCGAGTGGCCGGGCACGGGG	PJA1	ENSG00000181191.12	transcript	ENST00000374571.5	protein_coding	1/1	chrX	69165281
chrX:69165305	G G	A A	4	a0001c0001t0001g0003 a0001c0001t0001g0005 a0001c0001t0001g0022 others(1): Show a0001c0001t0001g0003 a0001c0001t0001g0005 a0001c0001t0001g0022 a0001c0007t0001g0042	47	HG00323.hp1 HG00597.hp1 HG00597.hp2 others(44): Show HG00323.hp1 HG00597.hp1 HG00597.hp2 HG00621.hp1 HG00733.hp2 HG00735.hp2 HG01261.hp1 HG01346.hp2 HG01496.hp2 HG01516.hp2 HG01934.hp1 HG02109.hp1 HG02615.hp1 HG02683.hp1 HG02735.hp1 HG02809.hp2 HG02818.hp2 HG03471.hp1 HG03540.hp1 HG03669.hp2 HG03927.hp1 HG04204.hp1 NA18941.hp2 NA18948.hp1 NA18951.hp1 NA18951.hp2 NA18960.hp1 NA18967.hp1 NA18968.hp2 NA18973.hp1 NA18985.hp1 NA18991.hp2 NA18993.hp2 NA18998.hp1 NA19006.hp1 NA19010.hp2 NA19011.hp2 NA19012.hp1 NA19060.hp1 NA19070.hp1 NA19079.hp1 NA19080.hp2 NA19082.hp1 NA19083.hp1 NA19084.hp2 NA19086.hp1 NA20300.hp2	intron_variant	MODIFIER	c.-68+67C>T c.-68+67C>T	PJA1	ENSG00000181191.12	transcript	ENST00000374571.5	protein_coding	1/1	chrX	69165305

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🧬 Gene Summary

AAmino acid(protein) Level Haplotype Info (Total: 6)

CCoding Level Haplotype Info (Total: 13)

TTranscript Level Haplotype Info (Total: 2)

GGenebody Level Haplotype Info (Total: 42)

A C AC Level (Amino Acid + Coding) Haplotype Info (Total: 13)

A C T ACT Level (Amino Acid + Coding + Transcript) Haplotype Info (Total: 14)

A C T G ACTG Level (Amino Acid + Coding + Transcript + Genebody) Haplotype Info (Total: 42)

Haplotype Details by Sample (Haploid Level) (Total: 334)

AAmino acid(protein) Level Haplotype Related Variants (Effect to Protein Coding Variants) (Total: 7)

CCoding Level Variants (Synonymous Mutations) (Total: 7)

TTranscript Level Haplotype Variants (5'UTR+3'UTR) (Total: 1)

GGenebody Level Haplotype Variants (Intron) (Total: 26)

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Annotation (Repeats)

Annotation (SNP Array)