Joint Open Genome and Omics Platform (JoGo)

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geneid	5833
ensemblid	ENSG00000185813.11
hgncid	8756
symbol	PCYT2
name	phosphate cytidylyltransferase 2, ethanolamine
refseq_nuc	NM_002861.5
refseq_prot	NP_002852.1
ensembl_nuc	ENST00000538936.7
ensembl_prot	ENSP00000439245.3
mane_status	MANE Select
chr	chr17
start	81900958
end	81911399
strand	-
ver	v1.2
region	chr17:81900958-81911399
region5000	chr17:81895958-81916399
regionname0	PCYT2_chr17_81900958_81911399
regionname5000	PCYT2_chr17_81895958_81916399

ahapid	grch38/ chm13v2	alen	total	AFR	AMR	EAS	EUR	SAS	JPT	regionname	genename	aa	chr	start	end
a0001	1/1	389	298	87	58	103	8	40	67	PCYT2_chr17_81895958_81916399	PCYT2	copy fasta	chr17	81895958	81916399
a0002	0/0	389	1	0	0	1	0	0	1	PCYT2_chr17_81895958_81916399	PCYT2	copy fasta	chr17	81895958	81916399
a0003	0/0	389	1	1	0	0	0	0	0	PCYT2_chr17_81895958_81916399	PCYT2	copy fasta	chr17	81895958	81916399

chapid	grch38/ chm13v2	clen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	cseq	chr	start	end
c0001	1/1	1170	290	80	58	102	8	40	PCYT2_chr17_81895958_81916399	PCYT2	copy fasta	chr17	81895958	81916399
c0002	0/0	1170	6	6	0	0	0	0	PCYT2_chr17_81895958_81916399	PCYT2	copy fasta	chr17	81895958	81916399
c0003	0/0	1170	1	0	0	1	0	0	PCYT2_chr17_81895958_81916399	PCYT2	copy fasta	chr17	81895958	81916399
c0004	0/0	1170	1	1	0	0	0	0	PCYT2_chr17_81895958_81916399	PCYT2	copy fasta	chr17	81895958	81916399
c0005	0/0	1170	1	1	0	0	0	0	PCYT2_chr17_81895958_81916399	PCYT2	copy fasta	chr17	81895958	81916399
c0006	0/0	1170	1	0	0	1	0	0	PCYT2_chr17_81895958_81916399	PCYT2	copy fasta	chr17	81895958	81916399

thapid	grch38 chm13v2	tlen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	tseq	chr	start	end
t0001	1/0	3920	215	58	40	84	4	28	PCYT2_chr17_81895958_81916399	PCYT2	copy fasta	chr17	81895958	81916399
t0002	0/0	3920	8	0	0	3	1	4	PCYT2_chr17_81895958_81916399	PCYT2	copy fasta	chr17	81895958	81916399
t0003	0/0	3920	7	0	1	6	0	0	PCYT2_chr17_81895958_81916399	PCYT2	copy fasta	chr17	81895958	81916399
t0004	0/1	3920	7	0	2	0	1	3	PCYT2_chr17_81895958_81916399	PCYT2	copy fasta	chr17	81895958	81916399
t0005	0/0	3920	5	5	0	0	0	0	PCYT2_chr17_81895958_81916399	PCYT2	copy fasta	chr17	81895958	81916399
t0006	0/0	3920	4	0	2	0	0	2	PCYT2_chr17_81895958_81916399	PCYT2	copy fasta	chr17	81895958	81916399
t0007	0/0	3920	4	1	3	0	0	0	PCYT2_chr17_81895958_81916399	PCYT2	copy fasta	chr17	81895958	81916399
t0008	0/0	3920	4	3	1	0	0	0	PCYT2_chr17_81895958_81916399	PCYT2	copy fasta	chr17	81895958	81916399
t0009	0/0	3917	3	0	0	3	0	0	PCYT2_chr17_81895958_81916399	PCYT2	copy fasta	chr17	81895958	81916399
t0010	0/0	3920	3	3	0	0	0	0	PCYT2_chr17_81895958_81916399	PCYT2	copy fasta	chr17	81895958	81916399
t0011	0/0	3920	2	0	1	0	0	1	PCYT2_chr17_81895958_81916399	PCYT2	copy fasta	chr17	81895958	81916399
t0012	0/0	3920	2	0	0	2	0	0	PCYT2_chr17_81895958_81916399	PCYT2	copy fasta	chr17	81895958	81916399
t0013	0/0	3920	2	1	1	0	0	0	PCYT2_chr17_81895958_81916399	PCYT2	copy fasta	chr17	81895958	81916399
t0014	0/0	3920	2	0	0	2	0	0	PCYT2_chr17_81895958_81916399	PCYT2	copy fasta	chr17	81895958	81916399
t0015	0/0	3920	2	2	0	0	0	0	PCYT2_chr17_81895958_81916399	PCYT2	copy fasta	chr17	81895958	81916399
t0016	0/0	3920	2	2	0	0	0	0	PCYT2_chr17_81895958_81916399	PCYT2	copy fasta	chr17	81895958	81916399
t0017	0/0	3920	2	2	0	0	0	0	PCYT2_chr17_81895958_81916399	PCYT2	copy fasta	chr17	81895958	81916399
t0018	0/0	3920	2	1	1	0	0	0	PCYT2_chr17_81895958_81916399	PCYT2	copy fasta	chr17	81895958	81916399
t0019	0/0	3920	1	0	0	0	1	0	PCYT2_chr17_81895958_81916399	PCYT2	copy fasta	chr17	81895958	81916399
t0020	0/0	3920	1	1	0	0	0	0	PCYT2_chr17_81895958_81916399	PCYT2	copy fasta	chr17	81895958	81916399
t0021	0/0	3920	1	1	0	0	0	0	PCYT2_chr17_81895958_81916399	PCYT2	copy fasta	chr17	81895958	81916399
t0022	0/0	3920	1	0	1	0	0	0	PCYT2_chr17_81895958_81916399	PCYT2	copy fasta	chr17	81895958	81916399
t0023	0/0	3920	1	1	0	0	0	0	PCYT2_chr17_81895958_81916399	PCYT2	copy fasta	chr17	81895958	81916399
t0024	0/0	3920	1	0	1	0	0	0	PCYT2_chr17_81895958_81916399	PCYT2	copy fasta	chr17	81895958	81916399
t0025	0/0	3920	1	1	0	0	0	0	PCYT2_chr17_81895958_81916399	PCYT2	copy fasta	chr17	81895958	81916399
t0026	0/0	3920	1	0	0	1	0	0	PCYT2_chr17_81895958_81916399	PCYT2	copy fasta	chr17	81895958	81916399
t0027	0/0	3920	1	0	0	0	1	0	PCYT2_chr17_81895958_81916399	PCYT2	copy fasta	chr17	81895958	81916399
t0028	0/0	3920	1	0	0	1	0	0	PCYT2_chr17_81895958_81916399	PCYT2	copy fasta	chr17	81895958	81916399
t0029	0/0	3920	1	0	0	1	0	0	PCYT2_chr17_81895958_81916399	PCYT2	copy fasta	chr17	81895958	81916399
t0030	0/0	3920	1	1	0	0	0	0	PCYT2_chr17_81895958_81916399	PCYT2	copy fasta	chr17	81895958	81916399
t0031	0/0	3920	1	0	0	1	0	0	PCYT2_chr17_81895958_81916399	PCYT2	copy fasta	chr17	81895958	81916399
t0032	0/0	3920	1	1	0	0	0	0	PCYT2_chr17_81895958_81916399	PCYT2	copy fasta	chr17	81895958	81916399
t0033	0/0	3920	1	1	0	0	0	0	PCYT2_chr17_81895958_81916399	PCYT2	copy fasta	chr17	81895958	81916399
t0034	0/0	3920	1	1	0	0	0	0	PCYT2_chr17_81895958_81916399	PCYT2	copy fasta	chr17	81895958	81916399
t0035	0/0	3920	1	0	0	0	0	1	PCYT2_chr17_81895958_81916399	PCYT2	copy fasta	chr17	81895958	81916399
t0036	0/0	3920	1	0	1	0	0	0	PCYT2_chr17_81895958_81916399	PCYT2	copy fasta	chr17	81895958	81916399
t0037	0/0	3920	1	0	1	0	0	0	PCYT2_chr17_81895958_81916399	PCYT2	copy fasta	chr17	81895958	81916399
t0038	0/0	3920	1	0	1	0	0	0	PCYT2_chr17_81895958_81916399	PCYT2	copy fasta	chr17	81895958	81916399
t0039	0/0	3920	1	1	0	0	0	0	PCYT2_chr17_81895958_81916399	PCYT2	copy fasta	chr17	81895958	81916399
t0040	0/0	3920	1	1	0	0	0	0	PCYT2_chr17_81895958_81916399	PCYT2	copy fasta	chr17	81895958	81916399
t0041	0/0	3920	1	0	1	0	0	0	PCYT2_chr17_81895958_81916399	PCYT2	copy fasta	chr17	81895958	81916399
t0042	0/0	3920	1	0	0	0	0	1	PCYT2_chr17_81895958_81916399	PCYT2	copy fasta	chr17	81895958	81916399

ghapid	grch38/ chm13v2	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	chr	start	end
g0001	0/0	135	28	24	58	4	21	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
g0002	0/0	18	4	6	5	0	3	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
g0003	0/0	10	0	0	9	0	1	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
g0004	0/0	9	9	0	0	0	0	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
g0005	0/0	8	0	0	3	1	4	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
g0006	0/0	7	0	1	6	0	0	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
g0007	0/0	5	5	0	0	0	0	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
g0008	0/0	4	1	3	0	0	0	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
g0009	0/0	4	0	2	0	0	2	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
g0010	0/0	4	3	1	0	0	0	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
g0011	1/0	4	1	2	0	0	0	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
g0012	0/0	4	4	0	0	0	0	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
g0013	0/0	4	0	0	4	0	0	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
g0014	0/0	3	0	2	0	0	1	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
g0015	0/0	3	3	0	0	0	0	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
g0016	0/0	3	3	0	0	0	0	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
g0017	0/0	2	0	1	0	0	1	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
g0018	0/1	2	0	0	0	1	0	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
g0019	0/0	2	1	1	0	0	0	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
g0020	0/0	2	0	0	2	0	0	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
g0021	0/0	2	0	0	2	0	0	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
g0022	0/0	2	0	0	2	0	0	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
g0023	0/0	2	1	1	0	0	0	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
g0024	0/0	2	2	0	0	0	0	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
g0025	0/0	2	0	2	0	0	0	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
g0026	0/0	1	0	0	1	0	0	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
g0027	0/0	1	0	1	0	0	0	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
g0028	0/0	1	0	1	0	0	0	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
g0029	0/0	1	1	0	0	0	0	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
g0030	0/0	1	1	0	0	0	0	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
g0031	0/0	1	1	0	0	0	0	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
g0032	0/0	1	0	1	0	0	0	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
g0033	0/0	1	0	0	0	0	1	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
g0034	0/0	1	0	0	0	0	1	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
g0035	0/0	1	1	0	0	0	0	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
g0036	0/0	1	1	0	0	0	0	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
g0037	0/0	1	0	1	0	0	0	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
g0038	0/0	1	1	0	0	0	0	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
g0039	0/0	1	0	0	1	0	0	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
g0040	0/0	1	0	0	1	0	0	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
g0041	0/0	1	0	0	1	0	0	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
g0042	0/0	1	0	0	0	1	0	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
g0043	0/0	1	0	1	0	0	0	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
g0044	0/0	1	0	1	0	0	0	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
g0045	0/0	1	1	0	0	0	0	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
g0046	0/0	1	0	0	1	0	0	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
g0047	0/0	1	0	1	0	0	0	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
g0048	0/0	1	0	0	1	0	0	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
g0049	0/0	1	1	0	0	0	0	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
g0050	0/0	1	0	0	1	0	0	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
g0051	0/0	1	0	1	0	0	0	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
g0052	0/0	1	1	0	0	0	0	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
g0053	0/0	1	1	0	0	0	0	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
g0054	0/0	1	0	0	1	0	0	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
g0055	0/0	1	0	0	0	1	0	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
g0056	0/0	1	0	0	1	0	0	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
g0057	0/0	1	0	0	1	0	0	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
g0058	0/0	1	1	0	0	0	0	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
g0059	0/0	1	0	0	0	0	1	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
g0060	0/0	1	0	1	0	0	0	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
g0061	0/0	1	0	1	0	0	0	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
g0062	0/0	1	1	0	0	0	0	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
g0063	0/0	1	0	1	0	0	0	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
g0064	0/0	1	0	0	0	0	1	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
g0065	0/0	1	1	0	0	0	0	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
g0066	0/0	1	0	1	0	0	0	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
g0067	0/0	1	1	0	0	0	0	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
g0068	0/0	1	0	0	1	0	0	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
g0069	0/0	1	0	0	0	0	1	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
g0070	0/0	1	1	0	0	0	0	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
g0071	0/0	1	0	0	0	0	1	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
g0072	0/0	1	0	0	0	0	1	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
g0073	0/0	1	1	0	0	0	0	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
g0074	0/0	1	1	0	0	0	0	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
g0075	0/0	1	1	0	0	0	0	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
g0076	0/0	1	1	0	0	0	0	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
g0077	0/0	1	1	0	0	0	0	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
g0078	0/0	1	1	0	0	0	0	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
g0079	0/0	1	1	0	0	0	0	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
g0080	0/0	1	1	0	0	0	0	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
g0081	0/0	1	0	0	1	0	0	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
g0082	0/0	1	0	0	1	0	0	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399

achapid	grch38/ chm13v2	clen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	cseq	chr	start	end
a0001c0001	1/1	1170	290	80	58	102	8	40	PCYT2_chr17_81895958_81916399	PCYT2	copy fasta	chr17	81895958	81916399
a0001c0002	0/0	1170	6	6	0	0	0	0	PCYT2_chr17_81895958_81916399	PCYT2	copy fasta	chr17	81895958	81916399
a0001c0003	0/0	1170	1	0	0	1	0	0	PCYT2_chr17_81895958_81916399	PCYT2	copy fasta	chr17	81895958	81916399
a0001c0004	0/0	1170	1	1	0	0	0	0	PCYT2_chr17_81895958_81916399	PCYT2	copy fasta	chr17	81895958	81916399
a0002c0006	0/0	1170	1	0	0	1	0	0	PCYT2_chr17_81895958_81916399	PCYT2	copy fasta	chr17	81895958	81916399
a0003c0005	0/0	1170	1	1	0	0	0	0	PCYT2_chr17_81895958_81916399	PCYT2	copy fasta	chr17	81895958	81916399

acthapid	grch38 chm13v2	tlen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	tseq	chr	start	end
a0001c0001t0001	1/0	5089	212	57	40	82	4	28	PCYT2_chr17_81895958_81916399	PCYT2	copy fasta	chr17	81895958	81916399
a0001c0001t0002	0/0	5089	8	0	0	3	1	4	PCYT2_chr17_81895958_81916399	PCYT2	copy fasta	chr17	81895958	81916399
a0001c0001t0003	0/0	5089	7	0	1	6	0	0	PCYT2_chr17_81895958_81916399	PCYT2	copy fasta	chr17	81895958	81916399
a0001c0001t0004	0/1	5089	7	0	2	0	1	3	PCYT2_chr17_81895958_81916399	PCYT2	copy fasta	chr17	81895958	81916399
a0001c0001t0006	0/0	5089	4	0	2	0	0	2	PCYT2_chr17_81895958_81916399	PCYT2	copy fasta	chr17	81895958	81916399
a0001c0001t0007	0/0	5089	4	1	3	0	0	0	PCYT2_chr17_81895958_81916399	PCYT2	copy fasta	chr17	81895958	81916399
a0001c0001t0008	0/0	5089	4	3	1	0	0	0	PCYT2_chr17_81895958_81916399	PCYT2	copy fasta	chr17	81895958	81916399
a0001c0001t0009	0/0	5086	3	0	0	3	0	0	PCYT2_chr17_81895958_81916399	PCYT2	copy fasta	chr17	81895958	81916399
a0001c0001t0010	0/0	5089	3	3	0	0	0	0	PCYT2_chr17_81895958_81916399	PCYT2	copy fasta	chr17	81895958	81916399
a0001c0001t0011	0/0	5089	2	0	1	0	0	1	PCYT2_chr17_81895958_81916399	PCYT2	copy fasta	chr17	81895958	81916399
a0001c0001t0012	0/0	5089	2	0	0	2	0	0	PCYT2_chr17_81895958_81916399	PCYT2	copy fasta	chr17	81895958	81916399
a0001c0001t0013	0/0	5089	2	1	1	0	0	0	PCYT2_chr17_81895958_81916399	PCYT2	copy fasta	chr17	81895958	81916399
a0001c0001t0014	0/0	5089	2	0	0	2	0	0	PCYT2_chr17_81895958_81916399	PCYT2	copy fasta	chr17	81895958	81916399
a0001c0001t0015	0/0	5089	2	2	0	0	0	0	PCYT2_chr17_81895958_81916399	PCYT2	copy fasta	chr17	81895958	81916399
a0001c0001t0016	0/0	5089	2	2	0	0	0	0	PCYT2_chr17_81895958_81916399	PCYT2	copy fasta	chr17	81895958	81916399
a0001c0001t0017	0/0	5089	1	1	0	0	0	0	PCYT2_chr17_81895958_81916399	PCYT2	copy fasta	chr17	81895958	81916399
a0001c0001t0018	0/0	5089	2	1	1	0	0	0	PCYT2_chr17_81895958_81916399	PCYT2	copy fasta	chr17	81895958	81916399
a0001c0001t0019	0/0	5089	1	0	0	0	1	0	PCYT2_chr17_81895958_81916399	PCYT2	copy fasta	chr17	81895958	81916399
a0001c0001t0020	0/0	5089	1	1	0	0	0	0	PCYT2_chr17_81895958_81916399	PCYT2	copy fasta	chr17	81895958	81916399
a0001c0001t0021	0/0	5089	1	1	0	0	0	0	PCYT2_chr17_81895958_81916399	PCYT2	copy fasta	chr17	81895958	81916399
a0001c0001t0022	0/0	5089	1	0	1	0	0	0	PCYT2_chr17_81895958_81916399	PCYT2	copy fasta	chr17	81895958	81916399
a0001c0001t0023	0/0	5089	1	1	0	0	0	0	PCYT2_chr17_81895958_81916399	PCYT2	copy fasta	chr17	81895958	81916399
a0001c0001t0024	0/0	5089	1	0	1	0	0	0	PCYT2_chr17_81895958_81916399	PCYT2	copy fasta	chr17	81895958	81916399
a0001c0001t0025	0/0	5089	1	1	0	0	0	0	PCYT2_chr17_81895958_81916399	PCYT2	copy fasta	chr17	81895958	81916399
a0001c0001t0026	0/0	5089	1	0	0	1	0	0	PCYT2_chr17_81895958_81916399	PCYT2	copy fasta	chr17	81895958	81916399
a0001c0001t0027	0/0	5089	1	0	0	0	1	0	PCYT2_chr17_81895958_81916399	PCYT2	copy fasta	chr17	81895958	81916399
a0001c0001t0028	0/0	5089	1	0	0	1	0	0	PCYT2_chr17_81895958_81916399	PCYT2	copy fasta	chr17	81895958	81916399
a0001c0001t0029	0/0	5089	1	0	0	1	0	0	PCYT2_chr17_81895958_81916399	PCYT2	copy fasta	chr17	81895958	81916399
a0001c0001t0030	0/0	5089	1	1	0	0	0	0	PCYT2_chr17_81895958_81916399	PCYT2	copy fasta	chr17	81895958	81916399
a0001c0001t0031	0/0	5089	1	0	0	1	0	0	PCYT2_chr17_81895958_81916399	PCYT2	copy fasta	chr17	81895958	81916399
a0001c0001t0032	0/0	5089	1	1	0	0	0	0	PCYT2_chr17_81895958_81916399	PCYT2	copy fasta	chr17	81895958	81916399
a0001c0001t0033	0/0	5089	1	1	0	0	0	0	PCYT2_chr17_81895958_81916399	PCYT2	copy fasta	chr17	81895958	81916399
a0001c0001t0034	0/0	5089	1	1	0	0	0	0	PCYT2_chr17_81895958_81916399	PCYT2	copy fasta	chr17	81895958	81916399
a0001c0001t0035	0/0	5089	1	0	0	0	0	1	PCYT2_chr17_81895958_81916399	PCYT2	copy fasta	chr17	81895958	81916399
a0001c0001t0036	0/0	5089	1	0	1	0	0	0	PCYT2_chr17_81895958_81916399	PCYT2	copy fasta	chr17	81895958	81916399
a0001c0001t0037	0/0	5089	1	0	1	0	0	0	PCYT2_chr17_81895958_81916399	PCYT2	copy fasta	chr17	81895958	81916399
a0001c0001t0038	0/0	5089	1	0	1	0	0	0	PCYT2_chr17_81895958_81916399	PCYT2	copy fasta	chr17	81895958	81916399
a0001c0001t0040	0/0	5089	1	1	0	0	0	0	PCYT2_chr17_81895958_81916399	PCYT2	copy fasta	chr17	81895958	81916399
a0001c0001t0041	0/0	5089	1	0	1	0	0	0	PCYT2_chr17_81895958_81916399	PCYT2	copy fasta	chr17	81895958	81916399
a0001c0001t0042	0/0	5089	1	0	0	0	0	1	PCYT2_chr17_81895958_81916399	PCYT2	copy fasta	chr17	81895958	81916399
a0001c0002t0005	0/0	5089	5	5	0	0	0	0	PCYT2_chr17_81895958_81916399	PCYT2	copy fasta	chr17	81895958	81916399
a0001c0002t0039	0/0	5089	1	1	0	0	0	0	PCYT2_chr17_81895958_81916399	PCYT2	copy fasta	chr17	81895958	81916399
a0001c0003t0001	0/0	5089	1	0	0	1	0	0	PCYT2_chr17_81895958_81916399	PCYT2	copy fasta	chr17	81895958	81916399
a0001c0004t0001	0/0	5089	1	1	0	0	0	0	PCYT2_chr17_81895958_81916399	PCYT2	copy fasta	chr17	81895958	81916399
a0002c0006t0001	0/0	5089	1	0	0	1	0	0	PCYT2_chr17_81895958_81916399	PCYT2	copy fasta	chr17	81895958	81916399
a0003c0005t0017	0/0	5089	1	1	0	0	0	0	PCYT2_chr17_81895958_81916399	PCYT2	copy fasta	chr17	81895958	81916399

actghapid	grch38/ chm13v2	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	chr	start	end
a0001c0001t0001g0001	0/0	135	28	24	58	4	21	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
a0001c0001t0001g0002	0/0	18	4	6	5	0	3	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
a0001c0001t0001g0003	0/0	10	0	0	9	0	1	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
a0001c0001t0001g0004	0/0	9	9	0	0	0	0	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
a0001c0001t0001g0011	1/0	4	1	2	0	0	0	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
a0001c0001t0001g0012	0/0	4	4	0	0	0	0	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
a0001c0001t0001g0013	0/0	4	0	0	4	0	0	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
a0001c0001t0001g0015	0/0	3	3	0	0	0	0	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
a0001c0001t0001g0017	0/0	2	0	1	0	0	1	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
a0001c0001t0001g0024	0/0	2	2	0	0	0	0	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
a0001c0001t0001g0025	0/0	2	0	2	0	0	0	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
a0001c0001t0001g0027	0/0	1	0	1	0	0	0	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
a0001c0001t0001g0028	0/0	1	0	1	0	0	0	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
a0001c0001t0001g0036	0/0	1	1	0	0	0	0	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
a0001c0001t0001g0041	0/0	1	0	0	1	0	0	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
a0001c0001t0001g0044	0/0	1	0	1	0	0	0	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
a0001c0001t0001g0045	0/0	1	1	0	0	0	0	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
a0001c0001t0001g0046	0/0	1	0	0	1	0	0	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
a0001c0001t0001g0047	0/0	1	0	1	0	0	0	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
a0001c0001t0001g0048	0/0	1	0	0	1	0	0	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
a0001c0001t0001g0049	0/0	1	1	0	0	0	0	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
a0001c0001t0001g0050	0/0	1	0	0	1	0	0	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
a0001c0001t0001g0066	0/0	1	0	1	0	0	0	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
a0001c0001t0001g0067	0/0	1	1	0	0	0	0	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
a0001c0001t0001g0068	0/0	1	0	0	1	0	0	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
a0001c0001t0001g0070	0/0	1	1	0	0	0	0	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
a0001c0001t0001g0071	0/0	1	0	0	0	0	1	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
a0001c0001t0001g0072	0/0	1	0	0	0	0	1	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
a0001c0001t0001g0073	0/0	1	1	0	0	0	0	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
a0001c0001t0001g0081	0/0	1	0	0	1	0	0	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
a0001c0001t0002g0005	0/0	8	0	0	3	1	4	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
a0001c0001t0003g0006	0/0	7	0	1	6	0	0	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
a0001c0001t0004g0009	0/0	4	0	2	0	0	2	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
a0001c0001t0004g0018	0/1	2	0	0	0	1	0	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
a0001c0001t0004g0034	0/0	1	0	0	0	0	1	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
a0001c0001t0006g0014	0/0	3	0	2	0	0	1	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
a0001c0001t0006g0069	0/0	1	0	0	0	0	1	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
a0001c0001t0007g0008	0/0	4	1	3	0	0	0	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
a0001c0001t0008g0010	0/0	4	3	1	0	0	0	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
a0001c0001t0009g0022	0/0	2	0	0	2	0	0	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
a0001c0001t0009g0039	0/0	1	0	0	1	0	0	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
a0001c0001t0010g0016	0/0	3	3	0	0	0	0	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
a0001c0001t0011g0032	0/0	1	0	1	0	0	0	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
a0001c0001t0011g0033	0/0	1	0	0	0	0	1	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
a0001c0001t0012g0020	0/0	2	0	0	2	0	0	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
a0001c0001t0013g0019	0/0	2	1	1	0	0	0	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
a0001c0001t0014g0021	0/0	2	0	0	2	0	0	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
a0001c0001t0015g0076	0/0	1	1	0	0	0	0	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
a0001c0001t0015g0080	0/0	1	1	0	0	0	0	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
a0001c0001t0016g0074	0/0	1	1	0	0	0	0	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
a0001c0001t0016g0075	0/0	1	1	0	0	0	0	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
a0001c0001t0017g0029	0/0	1	1	0	0	0	0	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
a0001c0001t0018g0023	0/0	2	1	1	0	0	0	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
a0001c0001t0019g0042	0/0	1	0	0	0	1	0	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
a0001c0001t0020g0078	0/0	1	1	0	0	0	0	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
a0001c0001t0021g0031	0/0	1	1	0	0	0	0	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
a0001c0001t0022g0051	0/0	1	0	1	0	0	0	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
a0001c0001t0023g0052	0/0	1	1	0	0	0	0	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
a0001c0001t0024g0043	0/0	1	0	1	0	0	0	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
a0001c0001t0025g0053	0/0	1	1	0	0	0	0	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
a0001c0001t0026g0054	0/0	1	0	0	1	0	0	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
a0001c0001t0027g0055	0/0	1	0	0	0	1	0	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
a0001c0001t0028g0056	0/0	1	0	0	1	0	0	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
a0001c0001t0029g0040	0/0	1	0	0	1	0	0	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
a0001c0001t0030g0065	0/0	1	1	0	0	0	0	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
a0001c0001t0031g0057	0/0	1	0	0	1	0	0	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
a0001c0001t0032g0038	0/0	1	1	0	0	0	0	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
a0001c0001t0033g0058	0/0	1	1	0	0	0	0	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
a0001c0001t0034g0035	0/0	1	1	0	0	0	0	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
a0001c0001t0035g0059	0/0	1	0	0	0	0	1	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
a0001c0001t0036g0060	0/0	1	0	1	0	0	0	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
a0001c0001t0037g0061	0/0	1	0	1	0	0	0	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
a0001c0001t0038g0037	0/0	1	0	1	0	0	0	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
a0001c0001t0040g0062	0/0	1	1	0	0	0	0	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
a0001c0001t0041g0063	0/0	1	0	1	0	0	0	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
a0001c0001t0042g0064	0/0	1	0	0	0	0	1	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
a0001c0002t0005g0007	0/0	5	5	0	0	0	0	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
a0001c0002t0039g0077	0/0	1	1	0	0	0	0	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
a0001c0003t0001g0026	0/0	1	0	0	1	0	0	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
a0001c0004t0001g0079	0/0	1	1	0	0	0	0	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
a0002c0006t0001g0082	0/0	1	0	0	1	0	0	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
a0003c0005t0017g0030	0/0	1	1	0	0	0	0	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399

sampleid	ID haplotypeid	ahapid	chapid	thapid	ghapid	gpopname	popname	regionname	genename	chr	start	end
HG00099	hp1	a0001	c0001	t0001	g0001	EUR	GBR	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
HG00099	hp2	a0001	c0001	t0001	g0001	EUR	GBR	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
HG00323	hp1	a0001	c0001	t0027	g0055	EUR	FIN	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
HG00323	hp2	a0001	c0001	t0001	g0001	EUR	FIN	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
HG00408	hp1	a0001	c0001	t0001	g0001	EAS	CHS	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
HG00408	hp2	a0001	c0001	t0001	g0001	EAS	CHS	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
HG00423	hp1	a0001	c0001	t0001	g0003	EAS	CHS	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
HG00423	hp2	a0001	c0001	t0001	g0001	EAS	CHS	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
HG00438	hp1	a0001	c0001	t0001	g0001	EAS	CHS	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
HG00438	hp2	a0001	c0001	t0001	g0001	EAS	CHS	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
HG00544	hp1	a0001	c0001	t0001	g0013	EAS	CHS	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
HG00544	hp2	a0001	c0001	t0028	g0056	EAS	CHS	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
HG00558	hp1	a0001	c0001	t0001	g0003	EAS	CHS	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
HG00558	hp2	a0001	c0001	t0003	g0006	EAS	CHS	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
HG00609	hp1	a0001	c0001	t0001	g0001	EAS	CHS	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
HG00609	hp2	a0001	c0001	t0001	g0001	EAS	CHS	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
HG00621	hp1	a0001	c0001	t0001	g0001	EAS	CHS	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
HG00621	hp2	a0001	c0001	t0002	g0005	EAS	CHS	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
HG00639	hp1	a0001	c0001	t0001	g0001	AMR	PUR	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
HG00639	hp2	a0001	c0001	t0001	g0002	AMR	PUR	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
HG00642	hp1	a0001	c0001	t0001	g0017	AMR	PUR	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
HG00642	hp2	a0001	c0001	t0001	g0028	AMR	PUR	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
HG00673	hp1	a0001	c0001	t0009	g0022	EAS	CHS	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
HG00673	hp2	a0001	c0001	t0001	g0001	EAS	CHS	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
HG00738	hp1	a0001	c0001	t0001	g0001	AMR	PUR	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
HG00738	hp2	a0001	c0001	t0001	g0001	AMR	PUR	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
HG00741	hp1	a0001	c0001	t0001	g0001	AMR	PUR	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
HG00741	hp2	a0001	c0001	t0013	g0019	AMR	PUR	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
HG01070	hp1	a0001	c0001	t0006	g0014	AMR	PUR	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
HG01070	hp2	a0001	c0001	t0024	g0043	AMR	PUR	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
HG01074	hp1	a0001	c0001	t0001	g0027	AMR	PUR	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
HG01074	hp2	a0001	c0001	t0001	g0001	AMR	PUR	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
HG01081	hp1	a0001	c0001	t0001	g0001	AMR	PUR	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
HG01081	hp2	a0001	c0001	t0001	g0001	AMR	PUR	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
HG01099	hp1	a0001	c0001	t0036	g0060	AMR	PUR	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
HG01099	hp2	a0001	c0001	t0001	g0001	AMR	PUR	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
HG01106	hp1	a0001	c0001	t0001	g0044	AMR	PUR	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
HG01106	hp2	a0001	c0001	t0001	g0001	AMR	PUR	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
HG01109	hp1	a0001	c0001	t0006	g0014	AMR	PUR	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
HG01109	hp2	a0001	c0001	t0001	g0001	AMR	PUR	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
HG01167	hp1	a0001	c0001	t0001	g0001	AMR	PUR	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
HG01167	hp2	a0001	c0001	t0001	g0011	AMR	PUR	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
HG01169	hp1	a0001	c0001	t0001	g0011	AMR	PUR	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
HG01169	hp2	a0001	c0001	t0001	g0001	AMR	PUR	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
HG01175	hp1	a0001	c0001	t0001	g0001	AMR	PUR	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
HG01175	hp2	a0001	c0001	t0007	g0008	AMR	PUR	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
HG01192	hp1	a0001	c0001	t0004	g0009	AMR	PUR	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
HG01192	hp2	a0001	c0001	t0001	g0001	AMR	PUR	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
HG01243	hp1	a0001	c0001	t0008	g0010	AMR	PUR	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
HG01243	hp2	a0001	c0001	t0001	g0001	AMR	PUR	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
HG01257	hp1	a0001	c0001	t0001	g0001	AMR	CLM	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
HG01257	hp2	a0001	c0001	t0004	g0009	AMR	CLM	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
HG01261	hp1	a0001	c0001	t0011	g0032	AMR	CLM	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
HG01261	hp2	a0001	c0001	t0038	g0037	AMR	CLM	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
HG01346	hp1	a0001	c0001	t0001	g0001	AMR	CLM	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
HG01346	hp2	a0001	c0001	t0001	g0001	AMR	CLM	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
HG01358	hp1	a0001	c0001	t0001	g0025	AMR	CLM	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
HG01358	hp2	a0001	c0001	t0041	g0063	AMR	CLM	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
HG01433	hp1	a0001	c0001	t0001	g0002	AMR	CLM	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
HG01433	hp2	a0001	c0001	t0001	g0025	AMR	CLM	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
HG01884	hp1	a0001	c0002	t0005	g0007	AFR	ACB	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
HG01884	hp2	a0001	c0001	t0001	g0001	AFR	ACB	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
HG01891	hp1	a0003	c0005	t0017	g0030	AFR	ACB	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
HG01891	hp2	a0001	c0001	t0001	g0004	AFR	ACB	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
HG01928	hp1	a0001	c0001	t0001	g0001	AMR	PEL	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
HG01928	hp2	a0001	c0001	t0001	g0001	AMR	PEL	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
HG01943	hp1	a0001	c0001	t0037	g0061	AMR	PEL	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
HG01943	hp2	a0001	c0001	t0001	g0002	AMR	PEL	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
HG01952	hp1	a0001	c0001	t0001	g0047	AMR	PEL	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
HG01952	hp2	a0001	c0001	t0001	g0002	AMR	PEL	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
HG01978	hp1	a0001	c0001	t0018	g0023	AMR	PEL	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
HG01978	hp2	a0001	c0001	t0001	g0002	AMR	PEL	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
HG01981	hp1	a0001	c0001	t0001	g0002	AMR	PEL	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
HG01981	hp2	a0001	c0001	t0007	g0008	AMR	PEL	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
HG01993	hp1	a0001	c0001	t0022	g0051	AMR	PEL	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
HG01993	hp2	a0001	c0001	t0001	g0001	AMR	PEL	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
HG02015	hp1	a0001	c0001	t0001	g0013	EAS	KHV	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
HG02015	hp2	a0001	c0001	t0002	g0005	EAS	KHV	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
HG02027	hp1	a0001	c0001	t0001	g0001	EAS	KHV	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
HG02027	hp2	a0001	c0001	t0001	g0001	EAS	KHV	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
HG02055	hp1	a0001	c0001	t0015	g0076	AFR	ACB	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
HG02055	hp2	a0001	c0001	t0001	g0012	AFR	ACB	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
HG02056	hp1	a0001	c0001	t0009	g0039	EAS	KHV	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
HG02056	hp2	a0001	c0001	t0001	g0003	EAS	KHV	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
HG02071	hp1	a0001	c0001	t0003	g0006	EAS	KHV	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
HG02071	hp2	a0001	c0001	t0001	g0001	EAS	KHV	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
HG02074	hp1	a0001	c0001	t0001	g0001	EAS	KHV	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
HG02074	hp2	a0001	c0001	t0001	g0001	EAS	KHV	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
HG02129	hp1	a0001	c0001	t0001	g0001	EAS	KHV	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
HG02129	hp2	a0001	c0001	t0001	g0001	EAS	KHV	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
HG02132	hp1	a0001	c0001	t0001	g0001	EAS	KHV	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
HG02132	hp2	a0001	c0001	t0001	g0003	EAS	KHV	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
HG02148	hp1	a0001	c0001	t0003	g0006	AMR	PEL	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
HG02148	hp2	a0001	c0001	t0007	g0008	AMR	PEL	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
HG02165	hp1	a0001	c0001	t0001	g0003	EAS	CDX	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
HG02165	hp2	a0001	c0001	t0001	g0001	EAS	CDX	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
HG02257	hp1	a0001	c0001	t0001	g0073	AFR	ACB	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
HG02257	hp2	a0001	c0001	t0013	g0019	AFR	ACB	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
HG02258	hp1	a0001	c0001	t0001	g0002	AFR	ACB	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
HG02258	hp2	a0001	c0004	t0001	g0079	AFR	ACB	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
HG02273	hp1	a0001	c0001	t0001	g0001	AMR	PEL	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
HG02273	hp2	a0001	c0001	t0001	g0001	AMR	PEL	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
HG02280	hp1	a0001	c0001	t0001	g0001	AFR	ACB	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
HG02280	hp2	a0001	c0002	t0005	g0007	AFR	ACB	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
HG02293	hp1	a0001	c0001	t0001	g0066	AMR	PEL	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
HG02293	hp2	a0001	c0001	t0001	g0001	AMR	PEL	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
HG02523	hp1	a0001	c0001	t0001	g0001	EAS	KHV	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
HG02523	hp2	a0001	c0001	t0001	g0003	EAS	KHV	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
HG02572	hp1	a0001	c0001	t0023	g0052	AFR	GWD	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
HG02572	hp2	a0001	c0001	t0001	g0001	AFR	GWD	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
HG02602	hp1	a0001	c0001	t0004	g0009	SAS	PJL	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
HG02602	hp2	a0001	c0001	t0001	g0001	SAS	PJL	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
HG02615	hp1	a0001	c0001	t0001	g0001	AFR	GWD	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
HG02615	hp2	a0001	c0001	t0010	g0016	AFR	GWD	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
HG02622	hp1	a0001	c0001	t0001	g0015	AFR	GWD	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
HG02622	hp2	a0001	c0001	t0001	g0001	AFR	GWD	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
HG02630	hp1	a0001	c0001	t0001	g0001	AFR	GWD	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
HG02630	hp2	a0001	c0002	t0039	g0077	AFR	GWD	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
HG02647	hp1	a0001	c0001	t0016	g0074	AFR	GWD	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
HG02647	hp2	a0001	c0001	t0001	g0001	AFR	GWD	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
HG02683	hp1	a0001	c0001	t0001	g0003	SAS	PJL	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
HG02683	hp2	a0001	c0001	t0001	g0017	SAS	PJL	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
HG02698	hp1	a0001	c0001	t0001	g0001	SAS	PJL	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
HG02698	hp2	a0001	c0001	t0001	g0001	SAS	PJL	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
HG02717	hp1	a0001	c0001	t0001	g0004	AFR	GWD	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
HG02717	hp2	a0001	c0001	t0040	g0062	AFR	GWD	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
HG02723	hp1	a0001	c0001	t0021	g0031	AFR	GWD	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
HG02723	hp2	a0001	c0001	t0001	g0001	AFR	GWD	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
HG02735	hp1	a0001	c0001	t0011	g0033	SAS	PJL	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
HG02735	hp2	a0001	c0001	t0001	g0001	SAS	PJL	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
HG02738	hp1	a0001	c0001	t0001	g0002	SAS	PJL	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
HG02738	hp2	a0001	c0001	t0002	g0005	SAS	PJL	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
HG02809	hp1	a0001	c0001	t0025	g0053	AFR	GWD	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
HG02809	hp2	a0001	c0002	t0005	g0007	AFR	GWD	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
HG02818	hp1	a0001	c0001	t0001	g0001	AFR	GWD	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
HG02818	hp2	a0001	c0001	t0001	g0012	AFR	GWD	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
HG02886	hp1	a0001	c0001	t0001	g0067	AFR	GWD	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
HG02886	hp2	a0001	c0001	t0001	g0001	AFR	GWD	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
HG02895	hp1	a0001	c0001	t0001	g0004	AFR	GWD	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
HG02895	hp2	a0001	c0001	t0001	g0001	AFR	GWD	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
HG02897	hp1	a0001	c0001	t0001	g0004	AFR	GWD	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
HG02897	hp2	a0001	c0001	t0001	g0001	AFR	GWD	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
HG02922	hp1	a0001	c0001	t0001	g0004	AFR	ESN	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
HG02922	hp2	a0001	c0001	t0001	g0001	AFR	ESN	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
HG02965	hp1	a0001	c0001	t0001	g0001	AFR	ESN	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
HG02965	hp2	a0001	c0001	t0001	g0001	AFR	ESN	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
HG02970	hp1	a0001	c0001	t0001	g0001	AFR	ESN	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
HG02970	hp2	a0001	c0001	t0001	g0015	AFR	ESN	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
HG02976	hp1	a0001	c0001	t0001	g0012	AFR	ESN	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
HG02976	hp2	a0001	c0001	t0015	g0080	AFR	ESN	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
HG03017	hp1	a0001	c0001	t0001	g0001	SAS	PJL	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
HG03017	hp2	a0001	c0001	t0001	g0001	SAS	PJL	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
HG03041	hp1	a0001	c0001	t0001	g0012	AFR	GWD	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
HG03041	hp2	a0001	c0001	t0001	g0001	AFR	GWD	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
HG03098	hp1	a0001	c0002	t0005	g0007	AFR	MSL	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
HG03098	hp2	a0001	c0001	t0001	g0001	AFR	MSL	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
HG03139	hp1	a0001	c0002	t0005	g0007	AFR	ESN	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
HG03139	hp2	a0001	c0001	t0001	g0004	AFR	ESN	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
HG03195	hp1	a0001	c0001	t0001	g0001	AFR	ESN	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
HG03195	hp2	a0001	c0001	t0008	g0010	AFR	ESN	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
HG03209	hp1	a0001	c0001	t0001	g0024	AFR	MSL	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
HG03209	hp2	a0001	c0001	t0001	g0049	AFR	MSL	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
HG03225	hp1	a0001	c0001	t0001	g0011	AFR	MSL	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
HG03225	hp2	a0001	c0001	t0001	g0015	AFR	MSL	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
HG03239	hp1	a0001	c0001	t0001	g0001	SAS	PJL	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
HG03239	hp2	a0001	c0001	t0001	g0001	SAS	PJL	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
HG03453	hp1	a0001	c0001	t0001	g0001	AFR	MSL	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
HG03453	hp2	a0001	c0001	t0034	g0035	AFR	MSL	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
HG03486	hp1	a0001	c0001	t0001	g0001	AFR	MSL	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
HG03486	hp2	a0001	c0001	t0008	g0010	AFR	MSL	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
HG03491	hp1	a0001	c0001	t0002	g0005	SAS	PJL	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
HG03491	hp2	a0001	c0001	t0001	g0001	SAS	PJL	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
HG03492	hp1	a0001	c0001	t0001	g0001	SAS	PJL	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
HG03492	hp2	a0001	c0001	t0001	g0002	SAS	PJL	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
HG03516	hp1	a0001	c0001	t0001	g0001	AFR	ESN	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
HG03516	hp2	a0001	c0001	t0016	g0075	AFR	ESN	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
HG03540	hp1	a0001	c0001	t0010	g0016	AFR	GWD	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
HG03540	hp2	a0001	c0001	t0030	g0065	AFR	GWD	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
HG03579	hp1	a0001	c0001	t0001	g0001	AFR	MSL	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
HG03579	hp2	a0001	c0001	t0001	g0001	AFR	MSL	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
HG03669	hp1	a0001	c0001	t0001	g0001	SAS	PJL	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
HG03669	hp2	a0001	c0001	t0035	g0059	SAS	PJL	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
HG03704	hp1	a0001	c0001	t0001	g0001	SAS	PJL	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
HG03704	hp2	a0001	c0001	t0001	g0001	SAS	PJL	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
HG03710	hp1	a0001	c0001	t0001	g0001	SAS	PJL	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
HG03710	hp2	a0001	c0001	t0001	g0071	SAS	PJL	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
HG03831	hp1	a0001	c0001	t0002	g0005	SAS	BEB	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
HG03831	hp2	a0001	c0001	t0001	g0001	SAS	BEB	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
HG03834	hp1	a0001	c0001	t0004	g0009	SAS	BEB	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
HG03834	hp2	a0001	c0001	t0006	g0014	SAS	BEB	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
HG03927	hp1	a0001	c0001	t0042	g0064	SAS	BEB	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
HG03927	hp2	a0001	c0001	t0001	g0001	SAS	BEB	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
HG03942	hp1	a0001	c0001	t0004	g0034	SAS	BEB	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
HG03942	hp2	a0001	c0001	t0002	g0005	SAS	BEB	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
HG04184	hp1	a0001	c0001	t0001	g0072	SAS	BEB	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
HG04184	hp2	a0001	c0001	t0001	g0002	SAS	BEB	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
HG04204	hp1	a0001	c0001	t0001	g0001	SAS	STU	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
HG04204	hp2	a0001	c0001	t0001	g0001	SAS	STU	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
HG04228	hp1	a0001	c0001	t0001	g0001	SAS	STU	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
HG04228	hp2	a0001	c0001	t0006	g0069	SAS	STU	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
NA18522	hp1	a0001	c0001	t0017	g0029	AFR	YRI	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
NA18522	hp2	a0001	c0001	t0001	g0002	AFR	YRI	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
NA18612	hp1	a0001	c0001	t0009	g0022	EAS	CHB	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
NA18612	hp2	a0001	c0001	t0001	g0001	EAS	CHB	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
NA18906	hp1	a0001	c0001	t0032	g0038	AFR	YRI	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
NA18906	hp2	a0001	c0001	t0001	g0001	AFR	YRI	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
NA18943	hp1	a0001	c0001	t0003	g0006	EAS	JPT	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
NA18943	hp2	a0001	c0001	t0001	g0002	EAS	JPT	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
NA18944	hp1	a0002	c0006	t0001	g0082	EAS	JPT	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
NA18944	hp2	a0001	c0001	t0001	g0013	EAS	JPT	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
NA18945	hp1	a0001	c0001	t0001	g0046	EAS	JPT	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
NA18945	hp2	a0001	c0001	t0001	g0001	EAS	JPT	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
NA18947	hp1	a0001	c0001	t0001	g0001	EAS	JPT	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
NA18947	hp2	a0001	c0001	t0001	g0001	EAS	JPT	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
NA18950	hp1	a0001	c0001	t0014	g0021	EAS	JPT	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
NA18950	hp2	a0001	c0001	t0001	g0001	EAS	JPT	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
NA18951	hp1	a0001	c0001	t0031	g0057	EAS	JPT	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
NA18951	hp2	a0001	c0001	t0001	g0001	EAS	JPT	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
NA18952	hp1	a0001	c0001	t0001	g0001	EAS	JPT	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
NA18952	hp2	a0001	c0001	t0001	g0001	EAS	JPT	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
NA18960	hp1	a0001	c0001	t0026	g0054	EAS	JPT	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
NA18960	hp2	a0001	c0001	t0001	g0001	EAS	JPT	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
NA18963	hp1	a0001	c0001	t0001	g0081	EAS	JPT	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
NA18963	hp2	a0001	c0001	t0001	g0001	EAS	JPT	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
NA18964	hp1	a0001	c0001	t0001	g0001	EAS	JPT	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
NA18964	hp2	a0001	c0001	t0001	g0001	EAS	JPT	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
NA18965	hp1	a0001	c0001	t0001	g0001	EAS	JPT	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
NA18965	hp2	a0001	c0001	t0001	g0001	EAS	JPT	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
NA18966	hp1	a0001	c0001	t0001	g0001	EAS	JPT	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
NA18966	hp2	a0001	c0001	t0001	g0001	EAS	JPT	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
NA18969	hp1	a0001	c0001	t0001	g0048	EAS	JPT	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
NA18969	hp2	a0001	c0001	t0001	g0001	EAS	JPT	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
NA18970	hp1	a0001	c0001	t0001	g0003	EAS	JPT	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
NA18970	hp2	a0001	c0001	t0001	g0001	EAS	JPT	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
NA18971	hp1	a0001	c0001	t0002	g0005	EAS	JPT	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
NA18971	hp2	a0001	c0001	t0001	g0001	EAS	JPT	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
NA18978	hp1	a0001	c0001	t0001	g0002	EAS	JPT	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
NA18978	hp2	a0001	c0001	t0029	g0040	EAS	JPT	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
NA18979	hp1	a0001	c0001	t0001	g0003	EAS	JPT	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
NA18979	hp2	a0001	c0001	t0001	g0001	EAS	JPT	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
NA18986	hp1	a0001	c0001	t0001	g0001	EAS	JPT	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
NA18986	hp2	a0001	c0001	t0001	g0001	EAS	JPT	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
NA18998	hp1	a0001	c0001	t0001	g0002	EAS	JPT	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
NA18998	hp2	a0001	c0001	t0001	g0001	EAS	JPT	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
NA18999	hp1	a0001	c0001	t0001	g0001	EAS	JPT	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
NA18999	hp2	a0001	c0001	t0001	g0001	EAS	JPT	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
NA19003	hp1	a0001	c0001	t0001	g0001	EAS	JPT	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
NA19003	hp2	a0001	c0001	t0001	g0001	EAS	JPT	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
NA19007	hp1	a0001	c0001	t0001	g0001	EAS	JPT	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
NA19007	hp2	a0001	c0001	t0001	g0001	EAS	JPT	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
NA19009	hp1	a0001	c0001	t0001	g0041	EAS	JPT	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
NA19009	hp2	a0001	c0001	t0012	g0020	EAS	JPT	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
NA19010	hp1	a0001	c0001	t0001	g0002	EAS	JPT	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
NA19010	hp2	a0001	c0001	t0001	g0001	EAS	JPT	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
NA19011	hp1	a0001	c0001	t0001	g0050	EAS	JPT	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
NA19011	hp2	a0001	c0001	t0001	g0001	EAS	JPT	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
NA19012	hp1	a0001	c0001	t0001	g0001	EAS	JPT	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
NA19012	hp2	a0001	c0001	t0001	g0001	EAS	JPT	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
NA19030	hp1	a0001	c0001	t0001	g0024	AFR	LWK	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
NA19030	hp2	a0001	c0001	t0001	g0001	AFR	LWK	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
NA19043	hp1	a0001	c0001	t0018	g0023	AFR	LWK	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
NA19043	hp2	a0001	c0001	t0001	g0036	AFR	LWK	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
NA19063	hp1	a0001	c0001	t0001	g0001	EAS	JPT	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
NA19063	hp2	a0001	c0001	t0001	g0001	EAS	JPT	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
NA19065	hp1	a0001	c0001	t0001	g0001	EAS	JPT	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
NA19065	hp2	a0001	c0001	t0014	g0021	EAS	JPT	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
NA19066	hp1	a0001	c0001	t0001	g0002	EAS	JPT	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
NA19066	hp2	a0001	c0001	t0001	g0013	EAS	JPT	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
NA19068	hp1	a0001	c0001	t0003	g0006	EAS	JPT	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
NA19068	hp2	a0001	c0001	t0012	g0020	EAS	JPT	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
NA19070	hp1	a0001	c0001	t0001	g0003	EAS	JPT	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
NA19070	hp2	a0001	c0001	t0003	g0006	EAS	JPT	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
NA19085	hp1	a0001	c0003	t0001	g0026	EAS	JPT	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
NA19085	hp2	a0001	c0001	t0001	g0001	EAS	JPT	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
NA19086	hp1	a0001	c0001	t0001	g0001	EAS	JPT	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
NA19086	hp2	a0001	c0001	t0003	g0006	EAS	JPT	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
NA19091	hp1	a0001	c0001	t0001	g0068	EAS	JPT	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
NA19091	hp2	a0001	c0001	t0001	g0001	EAS	JPT	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
NA19240	hp1	a0001	c0001	t0001	g0002	AFR	YRI	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
NA19240	hp2	a0001	c0001	t0001	g0070	AFR	YRI	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
NA20129	hp1	a0001	c0001	t0001	g0004	AFR	ASW	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
NA20129	hp2	a0001	c0001	t0001	g0002	AFR	ASW	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
NA20752	hp1	a0001	c0001	t0019	g0042	EUR	TSI	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
NA20752	hp2	a0001	c0001	t0001	g0001	EUR	TSI	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
NA20805	hp1	a0001	c0001	t0002	g0005	EUR	TSI	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
NA20805	hp2	a0001	c0001	t0004	g0018	EUR	TSI	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
NA20905	hp1	a0001	c0001	t0001	g0001	SAS	GIH	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
NA20905	hp2	a0001	c0001	t0001	g0001	SAS	GIH	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
HG02109	hp1	a0001	c0001	t0001	g0004	AFR	ACB	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
HG02109	hp2	a0001	c0001	t0001	g0001	AFR	ACB	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
HG02486	hp1	a0001	c0001	t0033	g0058	AFR	ACB	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
HG02486	hp2	a0001	c0001	t0001	g0001	AFR	ACB	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
HG02559	hp1	a0001	c0001	t0008	g0010	AFR	ACB	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
HG02559	hp2	a0001	c0001	t0020	g0078	AFR	ACB	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
HG03471	hp1	a0001	c0001	t0010	g0016	AFR	MSL	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
HG03471	hp2	a0001	c0001	t0001	g0045	AFR	MSL	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
NA20300	hp1	a0001	c0001	t0001	g0004	AFR	USA	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
NA20300	hp2	a0001	c0001	t0007	g0008	AFR	USA	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
homoSapiens_chm13v2	hp1	a0001	c0001	t0004	g0018	REF	REF	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399
homoSapiens_grch38	hp1	a0001	c0001	t0001	g0011	REF	REF	PCYT2_chr17_81895958_81916399	PCYT2	chr17	81895958	81916399

chr:pos	ref	alt	# # of ahapid:amino-acid(protein) level	ahapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	hgvs_p	genename	geneid	featuretype	featureid	transcript_biotype	rank	cdna cdna pos length	cds cds pos length	aa aa pos length	chr	pos
chr17:81906770	G G	C C	1	a0003 a0003	1	HG01891.hp1 HG01891.hp1	missense_variant	MODERATE	c.666C>G c.666C>G	p.Phe222Leu p.Phe222Leu	PCYT2	ENSG00000185813.11	transcript	ENST00000538936.7	protein_coding	7/13	710/5089	666/1170	222/389	chr17	81906770
chr17:81908891	A A	G G	1	a0002 a0002	1	NA18944.hp1 NA18944.hp1	missense_variant	MODERATE	c.325T>C c.325T>C	p.Phe109Leu p.Phe109Leu	PCYT2	ENSG00000185813.11	transcript	ENST00000538936.7	protein_coding	3/13	369/5089	325/1170	109/389	chr17	81908891
chr17:81908892	G G	C C	1	a0002 a0002	1	NA18944.hp1 NA18944.hp1	missense_variant	MODERATE	c.324C>G c.324C>G	p.Asp108Glu p.Asp108Glu	PCYT2	ENSG00000185813.11	transcript	ENST00000538936.7	protein_coding	3/13	368/5089	324/1170	108/389	chr17	81908892
chr17:81908900	T T	C C	1	a0002 a0002	1	NA18944.hp1 NA18944.hp1	missense_variant	MODERATE	c.316A>G c.316A>G	p.Asn106Asp p.Asn106Asp	PCYT2	ENSG00000185813.11	transcript	ENST00000538936.7	protein_coding	3/13	360/5089	316/1170	106/389	chr17	81908900
chr17:81908905	T T	C C	1	a0002 a0002	1	NA18944.hp1 NA18944.hp1	missense_variant	MODERATE	c.311A>G c.311A>G	p.Lys104Arg p.Lys104Arg	PCYT2	ENSG00000185813.11	transcript	ENST00000538936.7	protein_coding	3/13	355/5089	311/1170	104/389	chr17	81908905
chr17:81908924	T T	C C	1	a0002 a0002	1	NA18944.hp1 NA18944.hp1	missense_variant	MODERATE	c.292A>G c.292A>G	p.Thr98Ala p.Thr98Ala	PCYT2	ENSG00000185813.11	transcript	ENST00000538936.7	protein_coding	3/13	336/5089	292/1170	98/389	chr17	81908924
chr17:81908935	G G	T T	1	a0002 a0002	1	NA18944.hp1 NA18944.hp1	missense_variant	MODERATE	c.281C>A c.281C>A	p.Pro94His p.Pro94His	PCYT2	ENSG00000185813.11	transcript	ENST00000538936.7	protein_coding	3/13	325/5089	281/1170	94/389	chr17	81908935
chr17:81909019	T T	C C	1	a0002 a0002	1	NA18944.hp1 NA18944.hp1	missense_variant	MODERATE	c.197A>G c.197A>G	p.Lys66Arg p.Lys66Arg	PCYT2	ENSG00000185813.11	transcript	ENST00000538936.7	protein_coding	3/13	241/5089	197/1170	66/389	chr17	81909019
chr17:81909036	C C	A A	1	a0002 a0002	1	NA18944.hp1 NA18944.hp1	missense_variant&splice_region_variant	MODERATE	c.180G>T c.180G>T	p.Glu60Asp p.Glu60Asp	PCYT2	ENSG00000185813.11	transcript	ENST00000538936.7	protein_coding	3/13	224/5089	180/1170	60/389	chr17	81909036

chr:pos	ref	alt	# # of chapid	chapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	hgvs_p	genename	geneid	featuretype	featureid	transcript_biotype	rank	cdna cdna pos length	cds cds pos length	aa aa pos length	chr	pos
chr17:81904929	C C	T T	1	a0001c0004 a0001c0004	1	HG02258.hp2 HG02258.hp2	synonymous_variant	LOW	c.1074G>A c.1074G>A	p.Ala358Ala p.Ala358Ala	PCYT2	ENSG00000185813.11	transcript	ENST00000538936.7	protein_coding	13/13	1118/5089	1074/1170	358/389	chr17	81904929
chr17:81906878	G G	A A	1	a0001c0002 a0001c0002	6	HG01884.hp1 HG02280.hp2 HG02630.hp2 others(3): Show HG01884.hp1 HG02280.hp2 HG02630.hp2 HG02809.hp2 HG03098.hp1 HG03139.hp1	synonymous_variant	LOW	c.558C>T c.558C>T	p.Pro186Pro p.Pro186Pro	PCYT2	ENSG00000185813.11	transcript	ENST00000538936.7	protein_coding	7/13	602/5089	558/1170	186/389	chr17	81906878
chr17:81907833	C C	T T	1	a0001c0003 a0001c0003	1	NA19085.hp1 NA19085.hp1	synonymous_variant	LOW	c.432G>A c.432G>A	p.Val144Val p.Val144Val	PCYT2	ENSG00000185813.11	transcript	ENST00000538936.7	protein_coding	5/13	476/5089	432/1170	144/389	chr17	81907833
chr17:81908877	G G	A A	1	a0002c0006 a0002c0006	1	NA18944.hp1 NA18944.hp1	splice_region_variant&synonymous_variant	LOW	c.339C>T c.339C>T	p.Gly113Gly p.Gly113Gly	PCYT2	ENSG00000185813.11	transcript	ENST00000538936.7	protein_coding	3/13	383/5089	339/1170	113/389	chr17	81908877
chr17:81908910	C C	A A	1	a0002c0006 a0002c0006	1	NA18944.hp1 NA18944.hp1	synonymous_variant	LOW	c.306G>T c.306G>T	p.Leu102Leu p.Leu102Leu	PCYT2	ENSG00000185813.11	transcript	ENST00000538936.7	protein_coding	3/13	350/5089	306/1170	102/389	chr17	81908910
chr17:81908925	A A	C C	1	a0002c0006 a0002c0006	1	NA18944.hp1 NA18944.hp1	synonymous_variant	LOW	c.291T>G c.291T>G	p.Thr97Thr p.Thr97Thr	PCYT2	ENSG00000185813.11	transcript	ENST00000538936.7	protein_coding	3/13	335/5089	291/1170	97/389	chr17	81908925
chr17:81908937	A A	T T	1	a0002c0006 a0002c0006	1	NA18944.hp1 NA18944.hp1	synonymous_variant	LOW	c.279T>A c.279T>A	p.Ala93Ala p.Ala93Ala	PCYT2	ENSG00000185813.11	transcript	ENST00000538936.7	protein_coding	3/13	323/5089	279/1170	93/389	chr17	81908937
chr17:81909000	A A	T T	1	a0002c0006 a0002c0006	1	NA18944.hp1 NA18944.hp1	synonymous_variant	LOW	c.216T>A c.216T>A	p.Thr72Thr p.Thr72Thr	PCYT2	ENSG00000185813.11	transcript	ENST00000538936.7	protein_coding	3/13	260/5089	216/1170	72/389	chr17	81909000
chr17:81911281	C C	T T	1	a0001c0003 a0001c0003	1	NA19085.hp1 NA19085.hp1	synonymous_variant	LOW	c.75G>A c.75G>A	p.Val25Val p.Val25Val	PCYT2	ENSG00000185813.11	transcript	ENST00000538936.7	protein_coding	1/13	119/5089	75/1170	25/389	chr17	81911281

chr:pos	ref	alt	# # of thapid:transcript level	thapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	chr	pos
chr17:81900980	T T	C C	1	a0001c0001t0007 a0001c0001t0007	4	HG01175.hp2 HG01981.hp2 HG02148.hp2 others(1): Show HG01175.hp2 HG01981.hp2 HG02148.hp2 NA20300.hp2	3_prime_UTR_variant	MODIFIER	c.3853A>G c.3853A>G	PCYT2	ENSG00000185813.11	transcript	ENST00000538936.7	protein_coding	13/13	3853	chr17	81900980
chr17:81900999	C C	G G	1	a0001c0001t0029 a0001c0001t0029	1	NA18978.hp2 NA18978.hp2	3_prime_UTR_variant	MODIFIER	c.3834G>C c.3834G>C	PCYT2	ENSG00000185813.11	transcript	ENST00000538936.7	protein_coding	13/13	3834	chr17	81900999
chr17:81901029	C C	G G	1	a0001c0001t0013 a0001c0001t0013	2	HG00741.hp2 HG02257.hp2 HG00741.hp2 HG02257.hp2	3_prime_UTR_variant	MODIFIER	c.3804G>C c.3804G>C	PCYT2	ENSG00000185813.11	transcript	ENST00000538936.7	protein_coding	13/13	3804	chr17	81901029
chr17:81901147	T T	C C	1	a0001c0001t0030 a0001c0001t0030	1	HG03540.hp2 HG03540.hp2	3_prime_UTR_variant	MODIFIER	c.3686A>G c.3686A>G	PCYT2	ENSG00000185813.11	transcript	ENST00000538936.7	protein_coding	13/13	3686	chr17	81901147
chr17:81901298	C C	T T	1	a0001c0001t0012 a0001c0001t0012	2	NA19009.hp2 NA19068.hp2 NA19009.hp2 NA19068.hp2	3_prime_UTR_variant	MODIFIER	c.3535G>A c.3535G>A	PCYT2	ENSG00000185813.11	transcript	ENST00000538936.7	protein_coding	13/13	3535	chr17	81901298
chr17:81901366	TCTC TCTC	T T	1	a0001c0001t0009 a0001c0001t0009	3	HG00673.hp1 HG02056.hp1 NA18612.hp1 HG00673.hp1 HG02056.hp1 NA18612.hp1	3_prime_UTR_variant	MODIFIER	c.3464_3466delGAG c.3464_3466delGAG	PCYT2	ENSG00000185813.11	transcript	ENST00000538936.7	protein_coding	13/13	3464	chr17	81901366
chr17:81901403	C C	T T	1	a0001c0001t0011 a0001c0001t0011	2	HG01261.hp1 HG02735.hp1 HG01261.hp1 HG02735.hp1	3_prime_UTR_variant	MODIFIER	c.3430G>A c.3430G>A	PCYT2	ENSG00000185813.11	transcript	ENST00000538936.7	protein_coding	13/13	3430	chr17	81901403
chr17:81901442	A A	G G	1	a0001c0001t0006 a0001c0001t0006	4	HG01070.hp1 HG01109.hp1 HG03834.hp2 others(1): Show HG01070.hp1 HG01109.hp1 HG03834.hp2 HG04228.hp2	3_prime_UTR_variant	MODIFIER	c.3391T>C c.3391T>C	PCYT2	ENSG00000185813.11	transcript	ENST00000538936.7	protein_coding	13/13	3391	chr17	81901442
chr17:81901471	G G	A A	1	a0001c0001t0031 a0001c0001t0031	1	NA18951.hp1 NA18951.hp1	3_prime_UTR_variant	MODIFIER	c.3362C>T c.3362C>T	PCYT2	ENSG00000185813.11	transcript	ENST00000538936.7	protein_coding	13/13	3362	chr17	81901471
chr17:81901570	G G	C C	1	a0001c0001t0016 a0001c0001t0016	2	HG02647.hp1 HG03516.hp2 HG02647.hp1 HG03516.hp2	3_prime_UTR_variant	MODIFIER	c.3263C>G c.3263C>G	PCYT2	ENSG00000185813.11	transcript	ENST00000538936.7	protein_coding	13/13	3263	chr17	81901570
chr17:81901581	G G	A A	1	a0001c0001t0020 a0001c0001t0020	1	HG02559.hp2 HG02559.hp2	3_prime_UTR_variant	MODIFIER	c.3252C>T c.3252C>T	PCYT2	ENSG00000185813.11	transcript	ENST00000538936.7	protein_coding	13/13	3252	chr17	81901581
chr17:81901703	G G	A A	2	a0001c0001t0017 a0003c0005t0017 a0001c0001t0017 a0003c0005t0017	2	HG01891.hp1 NA18522.hp1 HG01891.hp1 NA18522.hp1	3_prime_UTR_variant	MODIFIER	c.3130C>T c.3130C>T	PCYT2	ENSG00000185813.11	transcript	ENST00000538936.7	protein_coding	13/13	3130	chr17	81901703
chr17:81901777	C C	T T	1	a0001c0001t0019 a0001c0001t0019	1	NA20752.hp1 NA20752.hp1	3_prime_UTR_variant	MODIFIER	c.3056G>A c.3056G>A	PCYT2	ENSG00000185813.11	transcript	ENST00000538936.7	protein_coding	13/13	3056	chr17	81901777
chr17:81901787	A A	G G	1	a0001c0001t0028 a0001c0001t0028	1	HG00544.hp2 HG00544.hp2	3_prime_UTR_variant	MODIFIER	c.3046T>C c.3046T>C	PCYT2	ENSG00000185813.11	transcript	ENST00000538936.7	protein_coding	13/13	3046	chr17	81901787
chr17:81901979	C C	A A	8	a0001c0001t0008 a0001c0001t0010 a0001c0001t0016 others(5): Show a0001c0001t0008 a0001c0001t0010 a0001c0001t0016 a0001c0001t0017 a0001c0001t0020 a0001c0002t0005 a0001c0002t0039 a0003c0005t0017	18	HG01243.hp1 HG01884.hp1 HG01891.hp1 others(15): Show HG01243.hp1 HG01884.hp1 HG01891.hp1 HG02280.hp2 HG02559.hp1 HG02559.hp2 HG02615.hp2 HG02630.hp2 HG02647.hp1 HG02809.hp2 HG03098.hp1 HG03139.hp1 HG03195.hp2 HG03471.hp1 HG03486.hp2 HG03516.hp2 HG03540.hp1 NA18522.hp1	3_prime_UTR_variant	MODIFIER	c.2854G>T c.2854G>T	PCYT2	ENSG00000185813.11	transcript	ENST00000538936.7	protein_coding	13/13	2854	chr17	81901979
chr17:81901994	G G	A A	1	a0001c0001t0032 a0001c0001t0032	1	NA18906.hp1 NA18906.hp1	3_prime_UTR_variant	MODIFIER	c.2839C>T c.2839C>T	PCYT2	ENSG00000185813.11	transcript	ENST00000538936.7	protein_coding	13/13	2839	chr17	81901994
chr17:81902063	T T	C C	1	a0001c0001t0033 a0001c0001t0033	1	HG02486.hp1 HG02486.hp1	3_prime_UTR_variant	MODIFIER	c.2770A>G c.2770A>G	PCYT2	ENSG00000185813.11	transcript	ENST00000538936.7	protein_coding	13/13	2770	chr17	81902063
chr17:81902200	C C	T T	1	a0001c0001t0027 a0001c0001t0027	1	HG00323.hp1 HG00323.hp1	3_prime_UTR_variant	MODIFIER	c.2633G>A c.2633G>A	PCYT2	ENSG00000185813.11	transcript	ENST00000538936.7	protein_coding	13/13	2633	chr17	81902200
chr17:81902260	C C	T T	1	a0001c0001t0026 a0001c0001t0026	1	NA18960.hp1 NA18960.hp1	3_prime_UTR_variant	MODIFIER	c.2573G>A c.2573G>A	PCYT2	ENSG00000185813.11	transcript	ENST00000538936.7	protein_coding	13/13	2573	chr17	81902260
chr17:81902304	C C	A A	3	a0001c0001t0008 a0001c0001t0017 a0003c0005t0017 a0001c0001t0008 a0001c0001t0017 a0003c0005t0017	6	HG01243.hp1 HG01891.hp1 HG02559.hp1 others(3): Show HG01243.hp1 HG01891.hp1 HG02559.hp1 HG03195.hp2 HG03486.hp2 NA18522.hp1	3_prime_UTR_variant	MODIFIER	c.2529G>T c.2529G>T	PCYT2	ENSG00000185813.11	transcript	ENST00000538936.7	protein_coding	13/13	2529	chr17	81902304
chr17:81902385	G G	C C	1	a0001c0001t0020 a0001c0001t0020	1	HG02559.hp2 HG02559.hp2	3_prime_UTR_variant	MODIFIER	c.2448C>G c.2448C>G	PCYT2	ENSG00000185813.11	transcript	ENST00000538936.7	protein_coding	13/13	2448	chr17	81902385
chr17:81902502	A A	G G	1	a0001c0001t0010 a0001c0001t0010	3	HG02615.hp2 HG03471.hp1 HG03540.hp1 HG02615.hp2 HG03471.hp1 HG03540.hp1	3_prime_UTR_variant	MODIFIER	c.2331T>C c.2331T>C	PCYT2	ENSG00000185813.11	transcript	ENST00000538936.7	protein_coding	13/13	2331	chr17	81902502
chr17:81902513	G G	A A	1	a0001c0001t0038 a0001c0001t0038	1	HG01261.hp2 HG01261.hp2	3_prime_UTR_variant	MODIFIER	c.2320C>T c.2320C>T	PCYT2	ENSG00000185813.11	transcript	ENST00000538936.7	protein_coding	13/13	2320	chr17	81902513
chr17:81902572	T T	G G	1	a0001c0001t0034 a0001c0001t0034	1	HG03453.hp2 HG03453.hp2	3_prime_UTR_variant	MODIFIER	c.2261A>C c.2261A>C	PCYT2	ENSG00000185813.11	transcript	ENST00000538936.7	protein_coding	13/13	2261	chr17	81902572
chr17:81902617	C C	T T	1	a0001c0001t0025 a0001c0001t0025	1	HG02809.hp1 HG02809.hp1	3_prime_UTR_variant	MODIFIER	c.2216G>A c.2216G>A	PCYT2	ENSG00000185813.11	transcript	ENST00000538936.7	protein_coding	13/13	2216	chr17	81902617
chr17:81903015	G G	A A	1	a0001c0001t0035 a0001c0001t0035	1	HG03669.hp2 HG03669.hp2	3_prime_UTR_variant	MODIFIER	c.1818C>T c.1818C>T	PCYT2	ENSG00000185813.11	transcript	ENST00000538936.7	protein_coding	13/13	1818	chr17	81903015
chr17:81903024	C C	T T	1	a0001c0001t0024 a0001c0001t0024	1	HG01070.hp2 HG01070.hp2	3_prime_UTR_variant	MODIFIER	c.1809G>A c.1809G>A	PCYT2	ENSG00000185813.11	transcript	ENST00000538936.7	protein_coding	13/13	1809	chr17	81903024
chr17:81903085	G G	A A	1	a0001c0001t0036 a0001c0001t0036	1	HG01099.hp1 HG01099.hp1	3_prime_UTR_variant	MODIFIER	c.1748C>T c.1748C>T	PCYT2	ENSG00000185813.11	transcript	ENST00000538936.7	protein_coding	13/13	1748	chr17	81903085
chr17:81903276	G G	A A	1	a0001c0001t0014 a0001c0001t0014	2	NA18950.hp1 NA19065.hp2 NA18950.hp1 NA19065.hp2	3_prime_UTR_variant	MODIFIER	c.1557C>T c.1557C>T	PCYT2	ENSG00000185813.11	transcript	ENST00000538936.7	protein_coding	13/13	1557	chr17	81903276
chr17:81903417	C C	T T	1	a0001c0001t0023 a0001c0001t0023	1	HG02572.hp1 HG02572.hp1	3_prime_UTR_variant	MODIFIER	c.1416G>A c.1416G>A	PCYT2	ENSG00000185813.11	transcript	ENST00000538936.7	protein_coding	13/13	1416	chr17	81903417
chr17:81903470	C C	G G	1	a0001c0001t0003 a0001c0001t0003	7	HG00558.hp2 HG02071.hp1 HG02148.hp1 others(4): Show HG00558.hp2 HG02071.hp1 HG02148.hp1 NA18943.hp1 NA19068.hp1 NA19070.hp2 NA19086.hp2	3_prime_UTR_variant	MODIFIER	c.1363G>C c.1363G>C	PCYT2	ENSG00000185813.11	transcript	ENST00000538936.7	protein_coding	13/13	1363	chr17	81903470
chr17:81903592	C C	T T	1	a0001c0001t0022 a0001c0001t0022	1	HG01993.hp1 HG01993.hp1	3_prime_UTR_variant	MODIFIER	c.1241G>A c.1241G>A	PCYT2	ENSG00000185813.11	transcript	ENST00000538936.7	protein_coding	13/13	1241	chr17	81903592
chr17:81903695	T T	C C	1	a0001c0001t0019 a0001c0001t0019	1	NA20752.hp1 NA20752.hp1	3_prime_UTR_variant	MODIFIER	c.1138A>G c.1138A>G	PCYT2	ENSG00000185813.11	transcript	ENST00000538936.7	protein_coding	13/13	1138	chr17	81903695
chr17:81903875	C C	G G	3	a0001c0001t0021 a0001c0002t0005 a0001c0002t0039 a0001c0001t0021 a0001c0002t0005 a0001c0002t0039	7	HG01884.hp1 HG02280.hp2 HG02630.hp2 others(4): Show HG01884.hp1 HG02280.hp2 HG02630.hp2 HG02723.hp1 HG02809.hp2 HG03098.hp1 HG03139.hp1	3_prime_UTR_variant	MODIFIER	c.958G>C c.958G>C	PCYT2	ENSG00000185813.11	transcript	ENST00000538936.7	protein_coding	13/13	958	chr17	81903875
chr17:81903878	C C	T T	1	a0001c0001t0020 a0001c0001t0020	1	HG02559.hp2 HG02559.hp2	3_prime_UTR_variant	MODIFIER	c.955G>A c.955G>A	PCYT2	ENSG00000185813.11	transcript	ENST00000538936.7	protein_coding	13/13	955	chr17	81903878
chr17:81903895	T T	C C	1	a0001c0001t0037 a0001c0001t0037	1	HG01943.hp1 HG01943.hp1	3_prime_UTR_variant	MODIFIER	c.938A>G c.938A>G	PCYT2	ENSG00000185813.11	transcript	ENST00000538936.7	protein_coding	13/13	938	chr17	81903895
chr17:81904104	T T	C C	3	a0001c0001t0002 a0001c0001t0004 a0001c0001t0009 a0001c0001t0002 a0001c0001t0004 a0001c0001t0009	18	HG00621.hp2 HG00673.hp1 HG01192.hp1 others(15): Show HG00621.hp2 HG00673.hp1 HG01192.hp1 HG01257.hp2 HG02015.hp2 HG02056.hp1 HG02602.hp1 HG02738.hp2 HG03491.hp1 HG03831.hp1 HG03834.hp1 HG03942.hp1 HG03942.hp2 NA18612.hp1 NA18971.hp1 NA20805.hp1 NA20805.hp2 homoSapiens_chm13v2.hp1	3_prime_UTR_variant	MODIFIER	c.729A>G c.729A>G	PCYT2	ENSG00000185813.11	transcript	ENST00000538936.7	protein_coding	13/13	729	chr17	81904104
chr17:81904113	C C	G G	2	a0001c0001t0015 a0001c0001t0038 a0001c0001t0015 a0001c0001t0038	3	HG01261.hp2 HG02055.hp1 HG02976.hp2 HG01261.hp2 HG02055.hp1 HG02976.hp2	3_prime_UTR_variant	MODIFIER	c.720G>C c.720G>C	PCYT2	ENSG00000185813.11	transcript	ENST00000538936.7	protein_coding	13/13	720	chr17	81904113
chr17:81904231	G G	A A	11	a0001c0001t0008 a0001c0001t0010 a0001c0001t0015 others(8): Show a0001c0001t0008 a0001c0001t0010 a0001c0001t0015 a0001c0001t0016 a0001c0001t0017 a0001c0001t0020 a0001c0001t0038 a0001c0001t0040 a0001c0002t0005 a0001c0002t0039 a0003c0005t0017	22	HG01243.hp1 HG01261.hp2 HG01884.hp1 others(19): Show HG01243.hp1 HG01261.hp2 HG01884.hp1 HG01891.hp1 HG02055.hp1 HG02280.hp2 HG02559.hp1 HG02559.hp2 HG02615.hp2 HG02630.hp2 HG02647.hp1 HG02717.hp2 HG02809.hp2 HG02976.hp2 HG03098.hp1 HG03139.hp1 HG03195.hp2 HG03471.hp1 HG03486.hp2 HG03516.hp2 HG03540.hp1 NA18522.hp1	3_prime_UTR_variant	MODIFIER	c.602C>T c.602C>T	PCYT2	ENSG00000185813.11	transcript	ENST00000538936.7	protein_coding	13/13	602	chr17	81904231
chr17:81904256	G G	A A	1	a0001c0001t0020 a0001c0001t0020	1	HG02559.hp2 HG02559.hp2	3_prime_UTR_variant	MODIFIER	c.577C>T c.577C>T	PCYT2	ENSG00000185813.11	transcript	ENST00000538936.7	protein_coding	13/13	577	chr17	81904256
chr17:81904263	C C	T T	1	a0001c0001t0020 a0001c0001t0020	1	HG02559.hp2 HG02559.hp2	3_prime_UTR_variant	MODIFIER	c.570G>A c.570G>A	PCYT2	ENSG00000185813.11	transcript	ENST00000538936.7	protein_coding	13/13	570	chr17	81904263
chr17:81904274	T T	C C	3	a0001c0001t0008 a0001c0001t0017 a0003c0005t0017 a0001c0001t0008 a0001c0001t0017 a0003c0005t0017	6	HG01243.hp1 HG01891.hp1 HG02559.hp1 others(3): Show HG01243.hp1 HG01891.hp1 HG02559.hp1 HG03195.hp2 HG03486.hp2 NA18522.hp1	3_prime_UTR_variant	MODIFIER	c.559A>G c.559A>G	PCYT2	ENSG00000185813.11	transcript	ENST00000538936.7	protein_coding	13/13	559	chr17	81904274
chr17:81904499	G G	A A	1	a0001c0001t0041 a0001c0001t0041	1	HG01358.hp2 HG01358.hp2	3_prime_UTR_variant	MODIFIER	c.334C>T c.334C>T	PCYT2	ENSG00000185813.11	transcript	ENST00000538936.7	protein_coding	13/13	334	chr17	81904499
chr17:81904592	G G	A A	1	a0001c0001t0042 a0001c0001t0042	1	HG03927.hp1 HG03927.hp1	3_prime_UTR_variant	MODIFIER	c.241C>T c.241C>T	PCYT2	ENSG00000185813.11	transcript	ENST00000538936.7	protein_coding	13/13	241	chr17	81904592
chr17:81904685	C C	T T	1	a0001c0001t0019 a0001c0001t0019	1	NA20752.hp1 NA20752.hp1	3_prime_UTR_variant	MODIFIER	c.148G>A c.148G>A	PCYT2	ENSG00000185813.11	transcript	ENST00000538936.7	protein_coding	13/13	148	chr17	81904685
chr17:81904728	C C	G G	1	a0001c0002t0005 a0001c0002t0005	5	HG01884.hp1 HG02280.hp2 HG02809.hp2 others(2): Show HG01884.hp1 HG02280.hp2 HG02809.hp2 HG03098.hp1 HG03139.hp1	3_prime_UTR_variant	MODIFIER	c.105G>C c.105G>C	PCYT2	ENSG00000185813.11	transcript	ENST00000538936.7	protein_coding	13/13	105	chr17	81904728
chr17:81904754	G G	A A	2	a0001c0001t0002 a0001c0001t0018 a0001c0001t0002 a0001c0001t0018	10	HG00621.hp2 HG01978.hp1 HG02015.hp2 others(7): Show HG00621.hp2 HG01978.hp1 HG02015.hp2 HG02738.hp2 HG03491.hp1 HG03831.hp1 HG03942.hp2 NA18971.hp1 NA19043.hp1 NA20805.hp1	3_prime_UTR_variant	MODIFIER	c.79C>T c.79C>T	PCYT2	ENSG00000185813.11	transcript	ENST00000538936.7	protein_coding	13/13	79	chr17	81904754

chr:pos	ref	alt	# # of ghapid:genebody level	ghapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	genename	geneid	featuretype	featureid	genebody_biotype	rank	chr	pos
chr17:81904948	A A	G G	11	a0001c0001t0001g0036 a0001c0001t0010g0016 a0001c0001t0015g0076 others(8): Show a0001c0001t0001g0036 a0001c0001t0010g0016 a0001c0001t0015g0076 a0001c0001t0016g0074 a0001c0001t0016g0075 a0001c0001t0017g0029 a0001c0001t0034g0035 a0001c0001t0038g0037 a0001c0002t0005g0007 a0001c0002t0039g0077 a0003c0005t0017g0030	17	HG01261.hp2 HG01884.hp1 HG01891.hp1 others(14): Show HG01261.hp2 HG01884.hp1 HG01891.hp1 HG02055.hp1 HG02280.hp2 HG02615.hp2 HG02630.hp2 HG02647.hp1 HG02809.hp2 HG03098.hp1 HG03139.hp1 HG03453.hp2 HG03471.hp1 HG03516.hp2 HG03540.hp1 NA18522.hp1 NA19043.hp2	splice_region_variant&intron_variant	LOW	c.1059-4T>C c.1059-4T>C	PCYT2	ENSG00000185813.11	transcript	ENST00000538936.7	protein_coding	12/12	chr17	81904948
chr17:81904969	A A	AGAGAGCG others(43): Show AGAGAGCGCCCATGAGGCGGCTCCGAGGGGGAGGGCAGGGTAAGTCTAGC G	1	a0001c0001t0001g0050 a0001c0001t0001g0050	1	NA19011.hp1 NA19011.hp1	intron_variant	MODIFIER	c.1059-26_1059-25ins others(50): Show c.1059-26_1059-25insCGCTAGACTTACCCTGCCCTCCCCCTCGGA GCCGCCTCATGGGCGCTCTC	PCYT2	ENSG00000185813.11	transcript	ENST00000538936.7	protein_coding	12/12	chr17	81904969
chr17:81905006	C C	G G	80	a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0003 others(77): Show a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0003 a0001c0001t0001g0004 a0001c0001t0001g0012 a0001c0001t0001g0013 a0001c0001t0001g0015 a0001c0001t0001g0017 a0001c0001t0001g0024 a0001c0001t0001g0025 a0001c0001t0001g0027 a0001c0001t0001g0028 a0001c0001t0001g0036 a0001c0001t0001g0041 a0001c0001t0001g0044 a0001c0001t0001g0045 a0001c0001t0001g0046 a0001c0001t0001g0047 a0001c0001t0001g0048 a0001c0001t0001g0049 a0001c0001t0001g0050 a0001c0001t0001g0066 a0001c0001t0001g0067 a0001c0001t0001g0068 a0001c0001t0001g0070 a0001c0001t0001g0071 a0001c0001t0001g0072 a0001c0001t0001g0073 a0001c0001t0001g0081 a0001c0001t0002g0005 a0001c0001t0003g0006 a0001c0001t0004g0009 a0001c0001t0004g0018 a0001c0001t0004g0034 a0001c0001t0006g0014 a0001c0001t0006g0069 a0001c0001t0007g0008 a0001c0001t0008g0010 a0001c0001t0009g0022 a0001c0001t0009g0039 a0001c0001t0010g0016 a0001c0001t0011g0032 a0001c0001t0011g0033 a0001c0001t0012g0020 a0001c0001t0013g0019 a0001c0001t0014g0021 a0001c0001t0015g0076 a0001c0001t0015g0080 a0001c0001t0016g0074 a0001c0001t0016g0075 a0001c0001t0017g0029 a0001c0001t0018g0023 a0001c0001t0019g0042 a0001c0001t0020g0078 a0001c0001t0021g0031 a0001c0001t0022g0051 a0001c0001t0023g0052 a0001c0001t0024g0043 a0001c0001t0025g0053 a0001c0001t0026g0054 a0001c0001t0027g0055 a0001c0001t0028g0056 a0001c0001t0029g0040 a0001c0001t0031g0057 a0001c0001t0032g0038 a0001c0001t0033g0058 a0001c0001t0034g0035 a0001c0001t0035g0059 a0001c0001t0036g0060 a0001c0001t0037g0061 a0001c0001t0038g0037 a0001c0001t0040g0062 a0001c0001t0041g0063 a0001c0001t0042g0064 a0001c0002t0005g0007 a0001c0002t0039g0077 a0001c0003t0001g0026 a0001c0004t0001g0079 a0002c0006t0001g0082 a0003c0005t0017g0030	295	HG00099.hp1 HG00099.hp2 HG00323.hp1 others(292): Show HG00099.hp1 HG00099.hp2 HG00323.hp1 HG00323.hp2 HG00408.hp1 HG00408.hp2 HG00423.hp1 HG00423.hp2 HG00438.hp1 HG00438.hp2 HG00544.hp1 HG00544.hp2 HG00558.hp1 HG00558.hp2 HG00609.hp1 HG00609.hp2 HG00621.hp1 HG00621.hp2 HG00639.hp1 HG00639.hp2 HG00642.hp1 HG00642.hp2 HG00673.hp1 HG00673.hp2 HG00738.hp1 HG00738.hp2 HG00741.hp1 HG00741.hp2 HG01070.hp1 HG01070.hp2 HG01074.hp1 HG01074.hp2 HG01081.hp1 HG01081.hp2 HG01099.hp1 HG01099.hp2 HG01106.hp1 HG01106.hp2 HG01109.hp1 HG01109.hp2 HG01167.hp1 HG01169.hp2 HG01175.hp1 HG01175.hp2 HG01192.hp1 HG01192.hp2 HG01243.hp1 HG01243.hp2 HG01257.hp1 HG01257.hp2 HG01261.hp1 HG01261.hp2 HG01346.hp1 HG01346.hp2 HG01358.hp1 HG01358.hp2 HG01433.hp1 HG01433.hp2 HG01884.hp1 HG01884.hp2 HG01891.hp1 HG01891.hp2 HG01928.hp1 HG01928.hp2 HG01943.hp1 HG01943.hp2 HG01952.hp1 HG01952.hp2 HG01978.hp1 HG01978.hp2 HG01981.hp1 HG01981.hp2 HG01993.hp1 HG01993.hp2 HG02015.hp1 HG02015.hp2 HG02027.hp1 HG02027.hp2 HG02055.hp1 HG02055.hp2 HG02056.hp1 HG02056.hp2 HG02071.hp1 HG02071.hp2 HG02074.hp1 HG02074.hp2 HG02109.hp1 HG02109.hp2 HG02129.hp1 HG02129.hp2 HG02132.hp1 HG02132.hp2 HG02148.hp1 HG02148.hp2 HG02165.hp1 HG02165.hp2 HG02257.hp1 HG02257.hp2 HG02258.hp1 HG02258.hp2 HG02273.hp1 HG02273.hp2 HG02280.hp1 HG02280.hp2 HG02293.hp1 HG02293.hp2 HG02486.hp1 HG02486.hp2 HG02523.hp1 HG02523.hp2 HG02559.hp1 HG02559.hp2 HG02572.hp1 HG02572.hp2 HG02602.hp1 HG02602.hp2 HG02615.hp1 HG02615.hp2 HG02622.hp1 HG02622.hp2 HG02630.hp1 HG02630.hp2 HG02647.hp1 HG02647.hp2 HG02683.hp1 HG02683.hp2 HG02698.hp1 HG02698.hp2 HG02717.hp1 HG02717.hp2 HG02723.hp1 HG02723.hp2 HG02735.hp1 HG02735.hp2 HG02738.hp1 HG02738.hp2 HG02809.hp1 HG02809.hp2 HG02818.hp1 HG02818.hp2 HG02886.hp1 HG02886.hp2 HG02895.hp1 HG02895.hp2 HG02897.hp1 HG02897.hp2 HG02922.hp1 HG02922.hp2 HG02965.hp1 HG02965.hp2 HG02970.hp1 HG02970.hp2 HG02976.hp1 HG02976.hp2 HG03017.hp1 HG03017.hp2 HG03041.hp1 HG03041.hp2 HG03098.hp1 HG03098.hp2 HG03139.hp1 HG03139.hp2 HG03195.hp1 HG03195.hp2 HG03209.hp1 HG03209.hp2 HG03225.hp2 HG03239.hp1 HG03239.hp2 HG03453.hp1 HG03453.hp2 HG03471.hp1 HG03471.hp2 HG03486.hp1 HG03486.hp2 HG03491.hp1 HG03491.hp2 HG03492.hp1 HG03492.hp2 HG03516.hp1 HG03516.hp2 HG03540.hp1 HG03579.hp1 HG03579.hp2 HG03669.hp1 HG03669.hp2 HG03704.hp1 HG03704.hp2 HG03710.hp1 HG03710.hp2 HG03831.hp1 HG03831.hp2 HG03834.hp1 HG03834.hp2 HG03927.hp1 HG03927.hp2 HG03942.hp1 HG03942.hp2 HG04184.hp1 HG04184.hp2 HG04204.hp1 HG04204.hp2 HG04228.hp1 HG04228.hp2 NA18522.hp1 NA18522.hp2 NA18612.hp1 NA18612.hp2 NA18906.hp1 NA18906.hp2 NA18943.hp1 NA18943.hp2 NA18944.hp1 NA18944.hp2 NA18945.hp1 NA18945.hp2 NA18947.hp1 NA18947.hp2 NA18950.hp1 NA18950.hp2 NA18951.hp1 NA18951.hp2 NA18952.hp1 NA18952.hp2 NA18960.hp1 NA18960.hp2 NA18963.hp1 NA18963.hp2 NA18964.hp1 NA18964.hp2 NA18965.hp1 NA18965.hp2 NA18966.hp1 NA18966.hp2 NA18969.hp1 NA18969.hp2 NA18970.hp1 NA18970.hp2 NA18971.hp1 NA18971.hp2 NA18978.hp1 NA18978.hp2 NA18979.hp1 NA18979.hp2 NA18986.hp1 NA18986.hp2 NA18998.hp1 NA18998.hp2 NA18999.hp1 NA18999.hp2 NA19003.hp1 NA19003.hp2 NA19007.hp1 NA19007.hp2 NA19009.hp1 NA19009.hp2 NA19010.hp1 NA19010.hp2 NA19011.hp1 NA19011.hp2 NA19012.hp1 NA19012.hp2 NA19030.hp1 NA19030.hp2 NA19043.hp1 NA19043.hp2 NA19063.hp1 NA19063.hp2 NA19065.hp1 NA19065.hp2 NA19066.hp1 NA19066.hp2 NA19068.hp1 NA19068.hp2 NA19070.hp1 NA19070.hp2 NA19085.hp1 NA19085.hp2 NA19086.hp1 NA19086.hp2 NA19091.hp1 NA19091.hp2 NA19240.hp1 NA19240.hp2 NA20129.hp1 NA20129.hp2 NA20300.hp1 NA20300.hp2 NA20752.hp1 NA20752.hp2 NA20805.hp1 NA20805.hp2 NA20905.hp1 NA20905.hp2 homoSapiens_chm13v2.hp1	intron_variant	MODIFIER	c.1058+60G>C c.1058+60G>C	PCYT2	ENSG00000185813.11	transcript	ENST00000538936.7	protein_coding	12/12	chr17	81905006
chr17:81905018	C C	T T	1	a0001c0001t0001g0049 a0001c0001t0001g0049	1	HG03209.hp2 HG03209.hp2	intron_variant	MODIFIER	c.1058+48G>A c.1058+48G>A	PCYT2	ENSG00000185813.11	transcript	ENST00000538936.7	protein_coding	12/12	chr17	81905018
chr17:81905059	A A	G G	3	a0001c0001t0016g0074 a0001c0001t0017g0029 a0003c0005t0017g0030 a0001c0001t0016g0074 a0001c0001t0017g0029 a0003c0005t0017g0030	3	HG01891.hp1 HG02647.hp1 NA18522.hp1 HG01891.hp1 HG02647.hp1 NA18522.hp1	splice_region_variant&intron_variant	LOW	c.1058+7T>C c.1058+7T>C	PCYT2	ENSG00000185813.11	transcript	ENST00000538936.7	protein_coding	12/12	chr17	81905059
chr17:81905178	G G	A A	2	a0001c0001t0016g0074 a0001c0001t0016g0075 a0001c0001t0016g0074 a0001c0001t0016g0075	2	HG02647.hp1 HG03516.hp2 HG02647.hp1 HG03516.hp2	intron_variant	MODIFIER	c.970-24C>T c.970-24C>T	PCYT2	ENSG00000185813.11	transcript	ENST00000538936.7	protein_coding	11/12	chr17	81905178
chr17:81905187	G G	T T	1	a0001c0001t0021g0031 a0001c0001t0021g0031	1	HG02723.hp1 HG02723.hp1	intron_variant	MODIFIER	c.970-33C>A c.970-33C>A	PCYT2	ENSG00000185813.11	transcript	ENST00000538936.7	protein_coding	11/12	chr17	81905187
chr17:81905278	G G	A A	1	a0001c0001t0011g0033 a0001c0001t0011g0033	1	HG02735.hp1 HG02735.hp1	intron_variant	MODIFIER	c.969+104C>T c.969+104C>T	PCYT2	ENSG00000185813.11	transcript	ENST00000538936.7	protein_coding	11/12	chr17	81905278
chr17:81905495	G G	T T	1	a0001c0001t0034g0035 a0001c0001t0034g0035	1	HG03453.hp2 HG03453.hp2	intron_variant	MODIFIER	c.904-48C>A c.904-48C>A	PCYT2	ENSG00000185813.11	transcript	ENST00000538936.7	protein_coding	10/12	chr17	81905495
chr17:81905610	C C	T T	1	a0001c0001t0001g0048 a0001c0001t0001g0048	1	NA18969.hp1 NA18969.hp1	intron_variant	MODIFIER	c.903+60G>A c.903+60G>A	PCYT2	ENSG00000185813.11	transcript	ENST00000538936.7	protein_coding	10/12	chr17	81905610
chr17:81905752	G G	T T	2	a0001c0001t0016g0074 a0001c0001t0016g0075 a0001c0001t0016g0074 a0001c0001t0016g0075	2	HG02647.hp1 HG03516.hp2 HG02647.hp1 HG03516.hp2	intron_variant	MODIFIER	c.838-17C>A c.838-17C>A	PCYT2	ENSG00000185813.11	transcript	ENST00000538936.7	protein_coding	9/12	chr17	81905752
chr17:81905769	G G	A A	1	a0001c0001t0001g0081 a0001c0001t0001g0081	1	NA18963.hp1 NA18963.hp1	intron_variant	MODIFIER	c.838-34C>T c.838-34C>T	PCYT2	ENSG00000185813.11	transcript	ENST00000538936.7	protein_coding	9/12	chr17	81905769
chr17:81905784	T T	A A	1	a0001c0001t0020g0078 a0001c0001t0020g0078	1	HG02559.hp2 HG02559.hp2	intron_variant	MODIFIER	c.838-49A>T c.838-49A>T	PCYT2	ENSG00000185813.11	transcript	ENST00000538936.7	protein_coding	9/12	chr17	81905784
chr17:81905812	C C	T T	1	a0001c0001t0001g0047 a0001c0001t0001g0047	1	HG01952.hp1 HG01952.hp1	intron_variant	MODIFIER	c.838-77G>A c.838-77G>A	PCYT2	ENSG00000185813.11	transcript	ENST00000538936.7	protein_coding	9/12	chr17	81905812
chr17:81906053	G G	A A	1	a0001c0001t0001g0066 a0001c0001t0001g0066	1	HG02293.hp1 HG02293.hp1	intron_variant	MODIFIER	c.837+47C>T c.837+47C>T	PCYT2	ENSG00000185813.11	transcript	ENST00000538936.7	protein_coding	9/12	chr17	81906053
chr17:81906071	C C	T T	1	a0001c0001t0001g0046 a0001c0001t0001g0046	1	NA18945.hp1 NA18945.hp1	intron_variant	MODIFIER	c.837+29G>A c.837+29G>A	PCYT2	ENSG00000185813.11	transcript	ENST00000538936.7	protein_coding	9/12	chr17	81906071
chr17:81906207	G G	A A	4	a0001c0001t0001g0024 a0001c0001t0015g0076 a0001c0001t0016g0074 others(1): Show a0001c0001t0001g0024 a0001c0001t0015g0076 a0001c0001t0016g0074 a0001c0001t0016g0075	5	HG02055.hp1 HG02647.hp1 HG03209.hp1 others(2): Show HG02055.hp1 HG02647.hp1 HG03209.hp1 HG03516.hp2 NA19030.hp1	intron_variant	MODIFIER	c.760-30C>T c.760-30C>T	PCYT2	ENSG00000185813.11	transcript	ENST00000538936.7	protein_coding	8/12	chr17	81906207
chr17:81906241	C C	T T	2	a0001c0001t0001g0041 a0001c0001t0029g0040 a0001c0001t0001g0041 a0001c0001t0029g0040	2	NA18978.hp2 NA19009.hp1 NA18978.hp2 NA19009.hp1	intron_variant	MODIFIER	c.760-64G>A c.760-64G>A	PCYT2	ENSG00000185813.11	transcript	ENST00000538936.7	protein_coding	8/12	chr17	81906241
chr17:81906351	G G	A A	1	a0001c0001t0001g0025 a0001c0001t0001g0025	2	HG01358.hp1 HG01433.hp2 HG01358.hp1 HG01433.hp2	intron_variant	MODIFIER	c.759+113C>T c.759+113C>T	PCYT2	ENSG00000185813.11	transcript	ENST00000538936.7	protein_coding	8/12	chr17	81906351
chr17:81906398	C C	G G	1	a0001c0001t0010g0016 a0001c0001t0010g0016	3	HG02615.hp2 HG03471.hp1 HG03540.hp1 HG02615.hp2 HG03471.hp1 HG03540.hp1	intron_variant	MODIFIER	c.759+66G>C c.759+66G>C	PCYT2	ENSG00000185813.11	transcript	ENST00000538936.7	protein_coding	8/12	chr17	81906398
chr17:81906551	A A	G G	8	a0001c0001t0001g0045 a0001c0001t0015g0076 a0001c0001t0016g0074 others(5): Show a0001c0001t0001g0045 a0001c0001t0015g0076 a0001c0001t0016g0074 a0001c0001t0016g0075 a0001c0001t0017g0029 a0001c0002t0005g0007 a0001c0002t0039g0077 a0003c0005t0017g0030	12	HG01884.hp1 HG01891.hp1 HG02055.hp1 others(9): Show HG01884.hp1 HG01891.hp1 HG02055.hp1 HG02280.hp2 HG02630.hp2 HG02647.hp1 HG02809.hp2 HG03098.hp1 HG03139.hp1 HG03471.hp2 HG03516.hp2 NA18522.hp1	splice_region_variant&intron_variant	LOW	c.677-5T>C c.677-5T>C	PCYT2	ENSG00000185813.11	transcript	ENST00000538936.7	protein_coding	7/12	chr17	81906551
chr17:81906625	C C	T T	1	a0001c0001t0001g0036 a0001c0001t0001g0036	1	NA19043.hp2 NA19043.hp2	intron_variant	MODIFIER	c.677-79G>A c.677-79G>A	PCYT2	ENSG00000185813.11	transcript	ENST00000538936.7	protein_coding	7/12	chr17	81906625
chr17:81906723	G G	A A	2	a0001c0001t0016g0074 a0001c0001t0016g0075 a0001c0001t0016g0074 a0001c0001t0016g0075	2	HG02647.hp1 HG03516.hp2 HG02647.hp1 HG03516.hp2	intron_variant	MODIFIER	c.676+37C>T c.676+37C>T	PCYT2	ENSG00000185813.11	transcript	ENST00000538936.7	protein_coding	7/12	chr17	81906723
chr17:81907342	G G	A A	1	a0001c0001t0020g0078 a0001c0001t0020g0078	1	HG02559.hp2 HG02559.hp2	intron_variant	MODIFIER	c.537+212C>T c.537+212C>T	PCYT2	ENSG00000185813.11	transcript	ENST00000538936.7	protein_coding	6/12	chr17	81907342
chr17:81907752	G G	A A	1	a0001c0001t0001g0044 a0001c0001t0001g0044	1	HG01106.hp1 HG01106.hp1	intron_variant	MODIFIER	c.492+21C>T c.492+21C>T	PCYT2	ENSG00000185813.11	transcript	ENST00000538936.7	protein_coding	5/12	chr17	81907752
chr17:81908093	T T	C C	16	a0001c0001t0001g0004 a0001c0001t0001g0036 a0001c0001t0010g0016 others(13): Show a0001c0001t0001g0004 a0001c0001t0001g0036 a0001c0001t0010g0016 a0001c0001t0015g0076 a0001c0001t0015g0080 a0001c0001t0016g0074 a0001c0001t0016g0075 a0001c0001t0017g0029 a0001c0001t0020g0078 a0001c0001t0021g0031 a0001c0001t0032g0038 a0001c0001t0034g0035 a0001c0001t0038g0037 a0001c0002t0005g0007 a0001c0002t0039g0077 a0003c0005t0017g0030	30	HG01261.hp2 HG01884.hp1 HG01891.hp1 others(27): Show HG01261.hp2 HG01884.hp1 HG01891.hp1 HG01891.hp2 HG02055.hp1 HG02109.hp1 HG02280.hp2 HG02559.hp2 HG02615.hp2 HG02630.hp2 HG02647.hp1 HG02717.hp1 HG02723.hp1 HG02809.hp2 HG02895.hp1 HG02897.hp1 HG02922.hp1 HG02976.hp2 HG03098.hp1 HG03139.hp1 HG03139.hp2 HG03453.hp2 HG03471.hp1 HG03516.hp2 HG03540.hp1 NA18522.hp1 NA18906.hp1 NA19043.hp2 NA20129.hp1 NA20300.hp1	intron_variant	MODIFIER	c.408-236A>G c.408-236A>G	PCYT2	ENSG00000185813.11	transcript	ENST00000538936.7	protein_coding	4/12	chr17	81908093
chr17:81908164	T T	C C	1	a0001c0001t0001g0067 a0001c0001t0001g0067	1	HG02886.hp1 HG02886.hp1	intron_variant	MODIFIER	c.408-307A>G c.408-307A>G	PCYT2	ENSG00000185813.11	transcript	ENST00000538936.7	protein_coding	4/12	chr17	81908164
chr17:81908189	CA CA	C C	9	a0001c0001t0001g0002 a0001c0001t0001g0015 a0001c0001t0001g0041 others(6): Show a0001c0001t0001g0002 a0001c0001t0001g0015 a0001c0001t0001g0041 a0001c0001t0001g0044 a0001c0001t0013g0019 a0001c0001t0019g0042 a0001c0001t0024g0043 a0001c0001t0029g0040 a0001c0004t0001g0079	29	HG00639.hp2 HG00741.hp2 HG01070.hp2 others(26): Show HG00639.hp2 HG00741.hp2 HG01070.hp2 HG01106.hp1 HG01433.hp1 HG01943.hp2 HG01952.hp2 HG01978.hp2 HG01981.hp1 HG02257.hp2 HG02258.hp1 HG02258.hp2 HG02622.hp1 HG02738.hp1 HG02970.hp2 HG03225.hp2 HG03492.hp2 HG04184.hp2 NA18522.hp2 NA18943.hp2 NA18978.hp1 NA18978.hp2 NA18998.hp1 NA19009.hp1 NA19010.hp1 NA19066.hp1 NA19240.hp1 NA20129.hp2 NA20752.hp1	intron_variant	MODIFIER	c.408-333delT c.408-333delT	PCYT2	ENSG00000185813.11	transcript	ENST00000538936.7	protein_coding	4/12	chr17	81908189
chr17:81908202	G G	C C	1	a0001c0001t0001g0068 a0001c0001t0001g0068	1	NA19091.hp1 NA19091.hp1	intron_variant	MODIFIER	c.408-345C>G c.408-345C>G	PCYT2	ENSG00000185813.11	transcript	ENST00000538936.7	protein_coding	4/12	chr17	81908202
chr17:81908310	C C	T T	1	a0001c0001t0009g0039 a0001c0001t0009g0039	1	HG02056.hp1 HG02056.hp1	intron_variant	MODIFIER	c.407+258G>A c.407+258G>A	PCYT2	ENSG00000185813.11	transcript	ENST00000538936.7	protein_coding	4/12	chr17	81908310
chr17:81908547	A A	G G	13	a0001c0001t0001g0036 a0001c0001t0010g0016 a0001c0001t0015g0076 others(10): Show a0001c0001t0001g0036 a0001c0001t0010g0016 a0001c0001t0015g0076 a0001c0001t0016g0074 a0001c0001t0016g0075 a0001c0001t0017g0029 a0001c0001t0020g0078 a0001c0001t0032g0038 a0001c0001t0034g0035 a0001c0001t0038g0037 a0001c0002t0005g0007 a0001c0002t0039g0077 a0003c0005t0017g0030	19	HG01261.hp2 HG01884.hp1 HG01891.hp1 others(16): Show HG01261.hp2 HG01884.hp1 HG01891.hp1 HG02055.hp1 HG02280.hp2 HG02559.hp2 HG02615.hp2 HG02630.hp2 HG02647.hp1 HG02809.hp2 HG03098.hp1 HG03139.hp1 HG03453.hp2 HG03471.hp1 HG03516.hp2 HG03540.hp1 NA18522.hp1 NA18906.hp1 NA19043.hp2	intron_variant	MODIFIER	c.407+21T>C c.407+21T>C	PCYT2	ENSG00000185813.11	transcript	ENST00000538936.7	protein_coding	4/12	chr17	81908547
chr17:81908701	C C	T T	2	a0001c0001t0016g0074 a0001c0001t0016g0075 a0001c0001t0016g0074 a0001c0001t0016g0075	2	HG02647.hp1 HG03516.hp2 HG02647.hp1 HG03516.hp2	intron_variant	MODIFIER	c.341-67G>A c.341-67G>A	PCYT2	ENSG00000185813.11	transcript	ENST00000538936.7	protein_coding	3/12	chr17	81908701
chr17:81908731	C C	T T	1	a0001c0001t0034g0035 a0001c0001t0034g0035	1	HG03453.hp2 HG03453.hp2	intron_variant	MODIFIER	c.341-97G>A c.341-97G>A	PCYT2	ENSG00000185813.11	transcript	ENST00000538936.7	protein_coding	3/12	chr17	81908731
chr17:81908734	G G	A A	1	a0001c0001t0006g0069 a0001c0001t0006g0069	1	HG04228.hp2 HG04228.hp2	intron_variant	MODIFIER	c.341-100C>T c.341-100C>T	PCYT2	ENSG00000185813.11	transcript	ENST00000538936.7	protein_coding	3/12	chr17	81908734
chr17:81908782	G G	T T	1	a0002c0006t0001g0082 a0002c0006t0001g0082	1	NA18944.hp1 NA18944.hp1	intron_variant	MODIFIER	c.340+94C>A c.340+94C>A	PCYT2	ENSG00000185813.11	transcript	ENST00000538936.7	protein_coding	3/12	chr17	81908782
chr17:81908787	G G	T T	1	a0002c0006t0001g0082 a0002c0006t0001g0082	1	NA18944.hp1 NA18944.hp1	intron_variant	MODIFIER	c.340+89C>A c.340+89C>A	PCYT2	ENSG00000185813.11	transcript	ENST00000538936.7	protein_coding	3/12	chr17	81908787
chr17:81908808	C C	A A	1	a0002c0006t0001g0082 a0002c0006t0001g0082	1	NA18944.hp1 NA18944.hp1	intron_variant	MODIFIER	c.340+68G>T c.340+68G>T	PCYT2	ENSG00000185813.11	transcript	ENST00000538936.7	protein_coding	3/12	chr17	81908808
chr17:81908811	C C	G G	1	a0002c0006t0001g0082 a0002c0006t0001g0082	1	NA18944.hp1 NA18944.hp1	intron_variant	MODIFIER	c.340+65G>C c.340+65G>C	PCYT2	ENSG00000185813.11	transcript	ENST00000538936.7	protein_coding	3/12	chr17	81908811
chr17:81908823	A A	G G	1	a0002c0006t0001g0082 a0002c0006t0001g0082	1	NA18944.hp1 NA18944.hp1	intron_variant	MODIFIER	c.340+53T>C c.340+53T>C	PCYT2	ENSG00000185813.11	transcript	ENST00000538936.7	protein_coding	3/12	chr17	81908823
chr17:81908838	A A	C C	1	a0002c0006t0001g0082 a0002c0006t0001g0082	1	NA18944.hp1 NA18944.hp1	intron_variant	MODIFIER	c.340+38T>G c.340+38T>G	PCYT2	ENSG00000185813.11	transcript	ENST00000538936.7	protein_coding	3/12	chr17	81908838
chr17:81908851	C C	A A	1	a0002c0006t0001g0082 a0002c0006t0001g0082	1	NA18944.hp1 NA18944.hp1	intron_variant	MODIFIER	c.340+25G>T c.340+25G>T	PCYT2	ENSG00000185813.11	transcript	ENST00000538936.7	protein_coding	3/12	chr17	81908851
chr17:81908860	C C	T T	1	a0001c0001t0004g0018 a0001c0001t0004g0018	2	NA20805.hp2 homoSapiens_chm13v2.hp1 NA20805.hp2 homoSapiens_chm13v2.hp1	intron_variant	MODIFIER	c.340+16G>A c.340+16G>A	PCYT2	ENSG00000185813.11	transcript	ENST00000538936.7	protein_coding	3/12	chr17	81908860
chr17:81908866	C C	G G	1	a0002c0006t0001g0082 a0002c0006t0001g0082	1	NA18944.hp1 NA18944.hp1	intron_variant	MODIFIER	c.340+10G>C c.340+10G>C	PCYT2	ENSG00000185813.11	transcript	ENST00000538936.7	protein_coding	3/12	chr17	81908866
chr17:81908867	G G	A A	1	a0002c0006t0001g0082 a0002c0006t0001g0082	1	NA18944.hp1 NA18944.hp1	intron_variant	MODIFIER	c.340+9C>T c.340+9C>T	PCYT2	ENSG00000185813.11	transcript	ENST00000538936.7	protein_coding	3/12	chr17	81908867
chr17:81908868	C C	A A	1	a0002c0006t0001g0082 a0002c0006t0001g0082	1	NA18944.hp1 NA18944.hp1	splice_region_variant&intron_variant	LOW	c.340+8G>T c.340+8G>T	PCYT2	ENSG00000185813.11	transcript	ENST00000538936.7	protein_coding	3/12	chr17	81908868
chr17:81909085	CCTCCAGT others(11): Show CCTCCAGTAGGAGGCCCCT	C C	1	a0001c0001t0010g0016 a0001c0001t0010g0016	3	HG02615.hp2 HG03471.hp1 HG03540.hp1 HG02615.hp2 HG03471.hp1 HG03540.hp1	intron_variant	MODIFIER	c.179-66_179-49delAG others(16): Show c.179-66_179-49delAGGGGCCTCCTACTGGAG	PCYT2	ENSG00000185813.11	transcript	ENST00000538936.7	protein_coding	2/12	chr17	81909085
chr17:81909104	T T	A A	1	a0001c0001t0010g0016 a0001c0001t0010g0016	3	HG02615.hp2 HG03471.hp1 HG03540.hp1 HG02615.hp2 HG03471.hp1 HG03540.hp1	intron_variant	MODIFIER	c.179-67A>T c.179-67A>T	PCYT2	ENSG00000185813.11	transcript	ENST00000538936.7	protein_coding	2/12	chr17	81909104
chr17:81909161	C C	T T	1	a0001c0001t0004g0034 a0001c0001t0004g0034	1	HG03942.hp1 HG03942.hp1	intron_variant	MODIFIER	c.179-124G>A c.179-124G>A	PCYT2	ENSG00000185813.11	transcript	ENST00000538936.7	protein_coding	2/12	chr17	81909161
chr17:81909173	G G	A A	1	a0001c0001t0001g0070 a0001c0001t0001g0070	1	NA19240.hp2 NA19240.hp2	intron_variant	MODIFIER	c.179-136C>T c.179-136C>T	PCYT2	ENSG00000185813.11	transcript	ENST00000538936.7	protein_coding	2/12	chr17	81909173
chr17:81909213	G G	A A	1	a0001c0001t0001g0071 a0001c0001t0001g0071	1	HG03710.hp2 HG03710.hp2	intron_variant	MODIFIER	c.179-176C>T c.179-176C>T	PCYT2	ENSG00000185813.11	transcript	ENST00000538936.7	protein_coding	2/12	chr17	81909213
chr17:81909367	G G	C C	1	a0001c0001t0020g0078 a0001c0001t0020g0078	1	HG02559.hp2 HG02559.hp2	intron_variant	MODIFIER	c.178+147C>G c.178+147C>G	PCYT2	ENSG00000185813.11	transcript	ENST00000538936.7	protein_coding	2/12	chr17	81909367
chr17:81909408	A A	T T	2	a0001c0001t0011g0032 a0001c0001t0011g0033 a0001c0001t0011g0032 a0001c0001t0011g0033	2	HG01261.hp1 HG02735.hp1 HG01261.hp1 HG02735.hp1	intron_variant	MODIFIER	c.178+106T>A c.178+106T>A	PCYT2	ENSG00000185813.11	transcript	ENST00000538936.7	protein_coding	2/12	chr17	81909408
chr17:81909650	C C	T T	2	a0001c0001t0017g0029 a0003c0005t0017g0030 a0001c0001t0017g0029 a0003c0005t0017g0030	2	HG01891.hp1 NA18522.hp1 HG01891.hp1 NA18522.hp1	intron_variant	MODIFIER	c.90-48G>A c.90-48G>A	PCYT2	ENSG00000185813.11	transcript	ENST00000538936.7	protein_coding	1/12	chr17	81909650
chr17:81909993	T T	G G	1	a0001c0001t0021g0031 a0001c0001t0021g0031	1	HG02723.hp1 HG02723.hp1	intron_variant	MODIFIER	c.90-391A>C c.90-391A>C	PCYT2	ENSG00000185813.11	transcript	ENST00000538936.7	protein_coding	1/12	chr17	81909993
chr17:81910102	T T	G G	1	a0001c0001t0001g0013 a0001c0001t0001g0013	4	HG00544.hp1 HG02015.hp1 NA18944.hp2 others(1): Show HG00544.hp1 HG02015.hp1 NA18944.hp2 NA19066.hp2	intron_variant	MODIFIER	c.90-500A>C c.90-500A>C	PCYT2	ENSG00000185813.11	transcript	ENST00000538936.7	protein_coding	1/12	chr17	81910102
chr17:81910434	G G	A A	1	a0001c0001t0001g0072 a0001c0001t0001g0072	1	HG04184.hp1 HG04184.hp1	intron_variant	MODIFIER	c.90-832C>T c.90-832C>T	PCYT2	ENSG00000185813.11	transcript	ENST00000538936.7	protein_coding	1/12	chr17	81910434
chr17:81910438	C C	G G	1	a0001c0001t0021g0031 a0001c0001t0021g0031	1	HG02723.hp1 HG02723.hp1	intron_variant	MODIFIER	c.89+829G>C c.89+829G>C	PCYT2	ENSG00000185813.11	transcript	ENST00000538936.7	protein_coding	1/12	chr17	81910438
chr17:81910563	C C	G G	1	a0001c0001t0001g0013 a0001c0001t0001g0013	4	HG00544.hp1 HG02015.hp1 NA18944.hp2 others(1): Show HG00544.hp1 HG02015.hp1 NA18944.hp2 NA19066.hp2	intron_variant	MODIFIER	c.89+704G>C c.89+704G>C	PCYT2	ENSG00000185813.11	transcript	ENST00000538936.7	protein_coding	1/12	chr17	81910563
chr17:81910575	C C	T T	1	a0001c0001t0001g0013 a0001c0001t0001g0013	4	HG00544.hp1 HG02015.hp1 NA18944.hp2 others(1): Show HG00544.hp1 HG02015.hp1 NA18944.hp2 NA19066.hp2	intron_variant	MODIFIER	c.89+692G>A c.89+692G>A	PCYT2	ENSG00000185813.11	transcript	ENST00000538936.7	protein_coding	1/12	chr17	81910575
chr17:81910664	G G	A A	1	a0001c0001t0001g0073 a0001c0001t0001g0073	1	HG02257.hp1 HG02257.hp1	intron_variant	MODIFIER	c.89+603C>T c.89+603C>T	PCYT2	ENSG00000185813.11	transcript	ENST00000538936.7	protein_coding	1/12	chr17	81910664
chr17:81910677	G G	C C	1	a0001c0001t0020g0078 a0001c0001t0020g0078	1	HG02559.hp2 HG02559.hp2	intron_variant	MODIFIER	c.89+590C>G c.89+590C>G	PCYT2	ENSG00000185813.11	transcript	ENST00000538936.7	protein_coding	1/12	chr17	81910677
chr17:81910742	G G	A A	9	a0001c0001t0010g0016 a0001c0001t0015g0076 a0001c0001t0016g0074 others(6): Show a0001c0001t0010g0016 a0001c0001t0015g0076 a0001c0001t0016g0074 a0001c0001t0016g0075 a0001c0001t0017g0029 a0001c0001t0020g0078 a0001c0002t0005g0007 a0001c0002t0039g0077 a0003c0005t0017g0030	15	HG01884.hp1 HG01891.hp1 HG02055.hp1 others(12): Show HG01884.hp1 HG01891.hp1 HG02055.hp1 HG02280.hp2 HG02559.hp2 HG02615.hp2 HG02630.hp2 HG02647.hp1 HG02809.hp2 HG03098.hp1 HG03139.hp1 HG03471.hp1 HG03516.hp2 HG03540.hp1 NA18522.hp1	intron_variant	MODIFIER	c.89+525C>T c.89+525C>T	PCYT2	ENSG00000185813.11	transcript	ENST00000538936.7	protein_coding	1/12	chr17	81910742
chr17:81910757	G G	A A	2	a0001c0001t0001g0015 a0001c0004t0001g0079 a0001c0001t0001g0015 a0001c0004t0001g0079	4	HG02258.hp2 HG02622.hp1 HG02970.hp2 others(1): Show HG02258.hp2 HG02622.hp1 HG02970.hp2 HG03225.hp2	intron_variant	MODIFIER	c.89+510C>T c.89+510C>T	PCYT2	ENSG00000185813.11	transcript	ENST00000538936.7	protein_coding	1/12	chr17	81910757
chr17:81910812	C C	G G	2	a0001c0001t0017g0029 a0003c0005t0017g0030 a0001c0001t0017g0029 a0003c0005t0017g0030	2	HG01891.hp1 NA18522.hp1 HG01891.hp1 NA18522.hp1	intron_variant	MODIFIER	c.89+455G>C c.89+455G>C	PCYT2	ENSG00000185813.11	transcript	ENST00000538936.7	protein_coding	1/12	chr17	81910812
chr17:81910928	G G	C C	1	a0001c0001t0010g0016 a0001c0001t0010g0016	3	HG02615.hp2 HG03471.hp1 HG03540.hp1 HG02615.hp2 HG03471.hp1 HG03540.hp1	intron_variant	MODIFIER	c.89+339C>G c.89+339C>G	PCYT2	ENSG00000185813.11	transcript	ENST00000538936.7	protein_coding	1/12	chr17	81910928
chr17:81910974	G G	A A	1	a0001c0001t0001g0012 a0001c0001t0001g0012	4	HG02055.hp2 HG02818.hp2 HG02976.hp1 others(1): Show HG02055.hp2 HG02818.hp2 HG02976.hp1 HG03041.hp1	intron_variant	MODIFIER	c.89+293C>T c.89+293C>T	PCYT2	ENSG00000185813.11	transcript	ENST00000538936.7	protein_coding	1/12	chr17	81910974
chr17:81911182	C C	A A	1	a0001c0001t0001g0017 a0001c0001t0001g0017	2	HG00642.hp1 HG02683.hp2 HG00642.hp1 HG02683.hp2	intron_variant	MODIFIER	c.89+85G>T c.89+85G>T	PCYT2	ENSG00000185813.11	transcript	ENST00000538936.7	protein_coding	1/12	chr17	81911182
chr17:81911183	C C	G G	2	a0001c0001t0001g0017 a0001c0001t0001g0028 a0001c0001t0001g0017 a0001c0001t0001g0028	3	HG00642.hp1 HG00642.hp2 HG02683.hp2 HG00642.hp1 HG00642.hp2 HG02683.hp2	intron_variant	MODIFIER	c.89+84G>C c.89+84G>C	PCYT2	ENSG00000185813.11	transcript	ENST00000538936.7	protein_coding	1/12	chr17	81911183
chr17:81911234	C C	A A	1	a0001c0001t0015g0080 a0001c0001t0015g0080	1	HG02976.hp2 HG02976.hp2	intron_variant	MODIFIER	c.89+33G>T c.89+33G>T	PCYT2	ENSG00000185813.11	transcript	ENST00000538936.7	protein_coding	1/12	chr17	81911234
chr17:81911249	C C	A A	1	a0001c0001t0001g0027 a0001c0001t0001g0027	1	HG01074.hp1 HG01074.hp1	intron_variant	MODIFIER	c.89+18G>T c.89+18G>T	PCYT2	ENSG00000185813.11	transcript	ENST00000538936.7	protein_coding	1/12	chr17	81911249
chr17:81911257	C C	A A	4	a0001c0001t0001g0003 a0001c0001t0001g0013 a0001c0001t0001g0081 others(1): Show a0001c0001t0001g0003 a0001c0001t0001g0013 a0001c0001t0001g0081 a0002c0006t0001g0082	16	HG00423.hp1 HG00544.hp1 HG00558.hp1 others(13): Show HG00423.hp1 HG00544.hp1 HG00558.hp1 HG02015.hp1 HG02056.hp2 HG02132.hp2 HG02165.hp1 HG02523.hp2 HG02683.hp1 NA18944.hp1 NA18944.hp2 NA18963.hp1 NA18970.hp1 NA18979.hp1 NA19066.hp2 NA19070.hp1	intron_variant	MODIFIER	c.89+10G>T c.89+10G>T	PCYT2	ENSG00000185813.11	transcript	ENST00000538936.7	protein_coding	1/12	chr17	81911257
chr17:81911258	C C	T T	1	a0001c0001t0001g0027 a0001c0001t0001g0027	1	HG01074.hp1 HG01074.hp1	intron_variant	MODIFIER	c.89+9G>A c.89+9G>A	PCYT2	ENSG00000185813.11	transcript	ENST00000538936.7	protein_coding	1/12	chr17	81911258

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JoGo Online Haplotype Explorer PCYT2_chr17_81895958_81916399

JoGo Local Haplotype Explorer (on iGV) PCYT2_chr17_81895958_81916399

Translation Multiple Alignment View

🧬 Gene Summary (with MANE)

AAmino acid(protein) Level Haplotype Info (Total: 3)

CCoding Level Haplotype Info (Total: 6)

TTranscript Level Haplotype Info (Total: 42)

GGenebody Level Haplotype Info (Total: 82)

A C AC Level (Amino Acid + Coding) Haplotype Info (Total: 6)

A C T ACT Level (Amino Acid + Coding + Transcript) Haplotype Info (Total: 46)

A C T G ACTG Level (Amino Acid + Coding + Transcript + Genebody) Haplotype Info (Total: 82)

Haplotype Details by Sample (Haploid Level) (Total: 300)

AAmino acid(protein) Level Haplotype Related Variants (Effect to Protein Coding Variants) (Total: 9)

CCoding Level Variants (On coding region but no effect to protein coding variants: Synonymous Mutations) (Total: 9)

TTranscript Level Haplotype Variants (Exon) (Total: 47)

GGenebody Level Haplotype Variants (Intron) (Total: 72)

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Annotation (Repeats)

Annotation (SNP Array)