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geneid	5355
ensemblid	ENSG00000102007.11
hgncid	9087
symbol	PLP2
name	proteolipid protein 2
refseq_nuc	NM_002668.3
refseq_prot	NP_002659.1
ensembl_nuc	ENST00000376327.6
ensembl_prot	ENSP00000365505.5
mane_status	MANE Select
chr	chrX
start	49171898
end	49175235
strand	+
ver	v1.2
region	chrX:49171898-49175235
region5000	chrX:49166898-49180235
regionname0	PLP2_chrX_49171898_49175235
regionname5000	PLP2_chrX_49166898_49180235

ahapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	alen	total	AFR	AMR	EAS	EUR	SAS	JPT	regionname	genename	aa	chr	start	end
a0001	1/1	152	258	71	53	91	11	30	64	PLP2_chrX_49166898_49180235	PLP2	copy fasta	chrX	49166898	49180235
a0002	0/0	152	1	1	0	0	0	0	0	PLP2_chrX_49166898_49180235	PLP2	copy fasta	chrX	49166898	49180235
a0003	0/0	127	1	0	0	1	0	0	1	PLP2_chrX_49166898_49180235	PLP2	copy fasta	chrX	49166898	49180235

chapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	clen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	cseq	chr	start	end
c0001	1/1	459	258	71	53	91	11	30	PLP2_chrX_49166898_49180235	PLP2	copy fasta	chrX	49166898	49180235
c0002	0/0	460	1	0	0	1	0	0	PLP2_chrX_49166898_49180235	PLP2	copy fasta	chrX	49166898	49180235
c0003	0/0	459	1	1	0	0	0	0	PLP2_chrX_49166898_49180235	PLP2	copy fasta	chrX	49166898	49180235

thapid	grch38 chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	tlen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	tseq	chr	start	end
t0001	1/1	645	257	71	53	90	11	30	PLP2_chrX_49166898_49180235	PLP2	copy fasta	chrX	49166898	49180235
t0002	0/0	648	1	0	0	1	0	0	PLP2_chrX_49166898_49180235	PLP2	copy fasta	chrX	49166898	49180235
t0003	0/0	645	1	1	0	0	0	0	PLP2_chrX_49166898_49180235	PLP2	copy fasta	chrX	49166898	49180235
t0004	0/0	645	1	0	0	1	0	0	PLP2_chrX_49166898_49180235	PLP2	copy fasta	chrX	49166898	49180235

ghapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	chr	start	end
g0001	0/1	200	39	42	79	11	28	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
g0002	1/0	24	21	2	0	0	0	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
g0003	0/0	8	0	3	5	0	0	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
g0004	0/0	4	4	0	0	0	0	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
g0005	0/0	3	1	0	2	0	0	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
g0006	0/0	3	3	0	0	0	0	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
g0007	0/0	1	0	1	0	0	0	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
g0008	0/0	1	0	1	0	0	0	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
g0009	0/0	1	0	0	1	0	0	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
g0010	0/0	1	0	0	1	0	0	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
g0011	0/0	1	0	0	0	0	1	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
g0012	0/0	1	0	0	1	0	0	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
g0013	0/0	1	1	0	0	0	0	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
g0014	0/0	1	1	0	0	0	0	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
g0015	0/0	1	1	0	0	0	0	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
g0016	0/0	1	0	0	0	0	1	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
g0017	0/0	1	0	1	0	0	0	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
g0018	0/0	1	1	0	0	0	0	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
g0019	0/0	1	0	1	0	0	0	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
g0020	0/0	1	0	0	1	0	0	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
g0021	0/0	1	0	1	0	0	0	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
g0022	0/0	1	0	0	1	0	0	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
g0023	0/0	1	0	1	0	0	0	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
g0024	0/0	1	0	0	1	0	0	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235

achapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	clen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	cseq	chr	start	end
a0001c0001	1/1	459	258	71	53	91	11	30	PLP2_chrX_49166898_49180235	PLP2	copy fasta	chrX	49166898	49180235
a0002c0003	0/0	459	1	1	0	0	0	0	PLP2_chrX_49166898_49180235	PLP2	copy fasta	chrX	49166898	49180235
a0003c0002	0/0	460	1	0	0	1	0	0	PLP2_chrX_49166898_49180235	PLP2	copy fasta	chrX	49166898	49180235

acthapid	grch38 chm13v2	tlen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	tseq	chr	start	end
a0001c0001t0001	1/1	1103	256	70	53	90	11	30	PLP2_chrX_49166898_49180235	PLP2	copy fasta	chrX	49166898	49180235
a0001c0001t0003	0/0	1103	1	1	0	0	0	0	PLP2_chrX_49166898_49180235	PLP2	copy fasta	chrX	49166898	49180235
a0001c0001t0004	0/0	1103	1	0	0	1	0	0	PLP2_chrX_49166898_49180235	PLP2	copy fasta	chrX	49166898	49180235
a0002c0003t0001	0/0	1103	1	1	0	0	0	0	PLP2_chrX_49166898_49180235	PLP2	copy fasta	chrX	49166898	49180235
a0003c0002t0002	0/0	1107	1	0	0	1	0	0	PLP2_chrX_49166898_49180235	PLP2	copy fasta	chrX	49166898	49180235

actghapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	chr	start	end
a0001c0001t0001g0001	0/1	198	38	42	78	11	28	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
a0001c0001t0001g0002	1/0	23	20	2	0	0	0	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
a0001c0001t0001g0003	0/0	8	0	3	5	0	0	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
a0001c0001t0001g0004	0/0	4	4	0	0	0	0	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
a0001c0001t0001g0005	0/0	3	1	0	2	0	0	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
a0001c0001t0001g0006	0/0	3	3	0	0	0	0	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
a0001c0001t0001g0007	0/0	1	0	1	0	0	0	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
a0001c0001t0001g0008	0/0	1	0	1	0	0	0	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
a0001c0001t0001g0009	0/0	1	0	0	1	0	0	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
a0001c0001t0001g0010	0/0	1	0	0	1	0	0	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
a0001c0001t0001g0011	0/0	1	0	0	0	0	1	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
a0001c0001t0001g0012	0/0	1	0	0	1	0	0	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
a0001c0001t0001g0013	0/0	1	1	0	0	0	0	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
a0001c0001t0001g0014	0/0	1	1	0	0	0	0	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
a0001c0001t0001g0015	0/0	1	1	0	0	0	0	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
a0001c0001t0001g0016	0/0	1	0	0	0	0	1	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
a0001c0001t0001g0017	0/0	1	0	1	0	0	0	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
a0001c0001t0001g0018	0/0	1	1	0	0	0	0	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
a0001c0001t0001g0019	0/0	1	0	1	0	0	0	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
a0001c0001t0001g0020	0/0	1	0	0	1	0	0	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
a0001c0001t0001g0021	0/0	1	0	1	0	0	0	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
a0001c0001t0001g0022	0/0	1	0	0	1	0	0	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
a0001c0001t0001g0023	0/0	1	0	1	0	0	0	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
a0001c0001t0003g0001	0/0	1	1	0	0	0	0	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
a0001c0001t0004g0001	0/0	1	0	0	1	0	0	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
a0002c0003t0001g0002	0/0	1	1	0	0	0	0	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
a0003c0002t0002g0024	0/0	1	0	0	1	0	0	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235

sampleid	ID haplotypeid	ahapid	chapid	thapid	ghapid	gpopname	popname	regionname	genename	chr	start	end
HG00140	hp1	a0001	c0001	t0001	g0001	EUR	GBR	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
HG00280	hp1	a0001	c0001	t0001	g0001	EUR	FIN	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
HG00323	hp1	a0001	c0001	t0001	g0001	EUR	FIN	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
HG00323	hp2	a0001	c0001	t0001	g0001	EUR	FIN	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
HG00408	hp1	a0001	c0001	t0001	g0001	EAS	CHS	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
HG00408	hp2	a0001	c0001	t0001	g0001	EAS	CHS	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
HG00438	hp1	a0001	c0001	t0001	g0001	EAS	CHS	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
HG00438	hp2	a0001	c0001	t0001	g0001	EAS	CHS	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
HG00544	hp1	a0001	c0001	t0001	g0012	EAS	CHS	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
HG00544	hp2	a0001	c0001	t0001	g0001	EAS	CHS	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
HG00558	hp1	a0001	c0001	t0001	g0001	EAS	CHS	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
HG00558	hp2	a0001	c0001	t0001	g0001	EAS	CHS	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
HG00609	hp1	a0001	c0001	t0001	g0001	EAS	CHS	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
HG00621	hp1	a0001	c0001	t0001	g0001	EAS	CHS	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
HG00639	hp1	a0001	c0001	t0001	g0001	AMR	PUR	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
HG00639	hp2	a0001	c0001	t0001	g0001	AMR	PUR	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
HG00642	hp1	a0001	c0001	t0001	g0001	AMR	PUR	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
HG00673	hp1	a0001	c0001	t0001	g0001	EAS	CHS	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
HG00735	hp1	a0001	c0001	t0001	g0019	AMR	PUR	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
HG00735	hp2	a0001	c0001	t0001	g0001	AMR	PUR	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
HG00738	hp1	a0001	c0001	t0001	g0001	AMR	PUR	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
HG00741	hp1	a0001	c0001	t0001	g0001	AMR	PUR	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
HG00741	hp2	a0001	c0001	t0001	g0001	AMR	PUR	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
HG01069	hp1	a0001	c0001	t0001	g0003	AMR	PUR	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
HG01070	hp1	a0001	c0001	t0001	g0001	AMR	PUR	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
HG01070	hp2	a0001	c0001	t0001	g0001	AMR	PUR	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
HG01071	hp1	a0001	c0001	t0001	g0001	AMR	PUR	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
HG01071	hp2	a0001	c0001	t0001	g0003	AMR	PUR	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
HG01074	hp1	a0001	c0001	t0001	g0001	AMR	PUR	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
HG01081	hp1	a0001	c0001	t0001	g0001	AMR	PUR	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
HG01081	hp2	a0001	c0001	t0001	g0001	AMR	PUR	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
HG01099	hp1	a0001	c0001	t0001	g0001	AMR	PUR	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
HG01106	hp1	a0001	c0001	t0001	g0001	AMR	PUR	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
HG01109	hp1	a0001	c0001	t0001	g0001	AMR	PUR	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
HG01167	hp1	a0001	c0001	t0001	g0002	AMR	PUR	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
HG01168	hp1	a0001	c0001	t0001	g0017	AMR	PUR	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
HG01168	hp2	a0001	c0001	t0001	g0001	AMR	PUR	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
HG01192	hp1	a0001	c0001	t0001	g0001	AMR	PUR	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
HG01243	hp1	a0001	c0001	t0001	g0002	AMR	PUR	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
HG01255	hp1	a0001	c0001	t0001	g0001	AMR	CLM	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
HG01256	hp1	a0001	c0001	t0001	g0001	AMR	CLM	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
HG01258	hp1	a0001	c0001	t0001	g0001	AMR	CLM	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
HG01261	hp1	a0001	c0001	t0001	g0023	AMR	CLM	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
HG01346	hp1	a0001	c0001	t0001	g0001	AMR	CLM	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
HG01346	hp2	a0001	c0001	t0001	g0001	AMR	CLM	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
HG01358	hp1	a0001	c0001	t0001	g0001	AMR	CLM	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
HG01361	hp1	a0001	c0001	t0001	g0001	AMR	CLM	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
HG01361	hp2	a0001	c0001	t0001	g0001	AMR	CLM	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
HG01433	hp1	a0001	c0001	t0001	g0021	AMR	CLM	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
HG01515	hp1	a0001	c0001	t0001	g0001	EUR	IBS	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
HG01516	hp1	a0001	c0001	t0001	g0001	EUR	IBS	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
HG01516	hp2	a0001	c0001	t0001	g0001	EUR	IBS	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
HG01517	hp1	a0001	c0001	t0001	g0001	EUR	IBS	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
HG01517	hp2	a0001	c0001	t0001	g0001	EUR	IBS	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
HG01884	hp1	a0001	c0001	t0001	g0002	AFR	ACB	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
HG01884	hp2	a0001	c0001	t0001	g0001	AFR	ACB	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
HG01891	hp1	a0001	c0001	t0001	g0002	AFR	ACB	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
HG01891	hp2	a0001	c0001	t0001	g0001	AFR	ACB	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
HG01928	hp1	a0001	c0001	t0001	g0001	AMR	PEL	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
HG01934	hp1	a0001	c0001	t0001	g0001	AMR	PEL	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
HG01943	hp1	a0001	c0001	t0001	g0001	AMR	PEL	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
HG01952	hp1	a0001	c0001	t0001	g0008	AMR	PEL	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
HG01975	hp1	a0001	c0001	t0001	g0001	AMR	PEL	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
HG01975	hp2	a0001	c0001	t0001	g0001	AMR	PEL	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
HG01978	hp1	a0001	c0001	t0001	g0007	AMR	PEL	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
HG01978	hp2	a0001	c0001	t0001	g0001	AMR	PEL	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
HG01981	hp1	a0001	c0001	t0001	g0001	AMR	PEL	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
HG01981	hp2	a0001	c0001	t0001	g0001	AMR	PEL	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
HG01993	hp1	a0001	c0001	t0001	g0001	AMR	PEL	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
HG01993	hp2	a0001	c0001	t0001	g0001	AMR	PEL	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
HG02015	hp1	a0001	c0001	t0001	g0001	EAS	KHV	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
HG02027	hp1	a0001	c0001	t0001	g0001	EAS	KHV	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
HG02040	hp1	a0001	c0001	t0001	g0001	EAS	KHV	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
HG02055	hp1	a0001	c0001	t0001	g0001	AFR	ACB	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
HG02056	hp1	a0001	c0001	t0001	g0020	EAS	KHV	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
HG02071	hp1	a0001	c0001	t0001	g0001	EAS	KHV	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
HG02074	hp1	a0001	c0001	t0001	g0001	EAS	KHV	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
HG02083	hp1	a0001	c0001	t0001	g0001	EAS	KHV	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
HG02129	hp1	a0001	c0001	t0001	g0003	EAS	KHV	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
HG02132	hp1	a0001	c0001	t0001	g0001	EAS	KHV	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
HG02135	hp1	a0001	c0001	t0001	g0001	EAS	KHV	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
HG02145	hp1	a0001	c0001	t0001	g0002	AFR	ACB	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
HG02148	hp1	a0001	c0001	t0001	g0003	AMR	PEL	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
HG02148	hp2	a0001	c0001	t0001	g0001	AMR	PEL	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
HG02155	hp1	a0001	c0001	t0001	g0001	EAS	CDX	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
HG02155	hp2	a0001	c0001	t0001	g0001	EAS	CDX	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
HG02257	hp1	a0001	c0001	t0001	g0001	AFR	ACB	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
HG02257	hp2	a0001	c0001	t0001	g0001	AFR	ACB	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
HG02258	hp1	a0001	c0001	t0001	g0001	AFR	ACB	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
HG02273	hp1	a0001	c0001	t0001	g0001	AMR	PEL	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
HG02273	hp2	a0001	c0001	t0001	g0001	AMR	PEL	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
HG02280	hp1	a0001	c0001	t0001	g0001	AFR	ACB	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
HG02280	hp2	a0001	c0001	t0001	g0001	AFR	ACB	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
HG02300	hp1	a0001	c0001	t0001	g0001	AMR	PEL	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
HG02451	hp1	a0001	c0001	t0003	g0001	AFR	ACB	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
HG02451	hp2	a0001	c0001	t0001	g0001	AFR	ACB	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
HG02523	hp1	a0001	c0001	t0004	g0001	EAS	KHV	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
HG02523	hp2	a0001	c0001	t0001	g0001	EAS	KHV	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
HG02572	hp1	a0001	c0001	t0001	g0002	AFR	GWD	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
HG02602	hp1	a0001	c0001	t0001	g0001	SAS	PJL	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
HG02615	hp1	a0001	c0001	t0001	g0002	AFR	GWD	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
HG02615	hp2	a0002	c0003	t0001	g0002	AFR	GWD	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
HG02622	hp1	a0001	c0001	t0001	g0001	AFR	GWD	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
HG02622	hp2	a0001	c0001	t0001	g0014	AFR	GWD	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
HG02630	hp1	a0001	c0001	t0001	g0018	AFR	GWD	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
HG02630	hp2	a0001	c0001	t0001	g0002	AFR	GWD	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
HG02647	hp1	a0001	c0001	t0001	g0001	AFR	GWD	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
HG02683	hp1	a0001	c0001	t0001	g0001	SAS	PJL	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
HG02683	hp2	a0001	c0001	t0001	g0001	SAS	PJL	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
HG02698	hp1	a0001	c0001	t0001	g0001	SAS	PJL	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
HG02717	hp1	a0001	c0001	t0001	g0002	AFR	GWD	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
HG02723	hp1	a0001	c0001	t0001	g0001	AFR	GWD	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
HG02723	hp2	a0001	c0001	t0001	g0001	AFR	GWD	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
HG02735	hp1	a0001	c0001	t0001	g0001	SAS	PJL	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
HG02738	hp1	a0001	c0001	t0001	g0001	SAS	PJL	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
HG02809	hp1	a0001	c0001	t0001	g0002	AFR	GWD	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
HG02809	hp2	a0001	c0001	t0001	g0001	AFR	GWD	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
HG02818	hp1	a0001	c0001	t0001	g0002	AFR	GWD	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
HG02818	hp2	a0001	c0001	t0001	g0001	AFR	GWD	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
HG02886	hp1	a0001	c0001	t0001	g0001	AFR	GWD	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
HG02886	hp2	a0001	c0001	t0001	g0002	AFR	GWD	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
HG02895	hp1	a0001	c0001	t0001	g0001	AFR	GWD	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
HG02897	hp1	a0001	c0001	t0001	g0001	AFR	GWD	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
HG02897	hp2	a0001	c0001	t0001	g0002	AFR	GWD	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
HG02922	hp1	a0001	c0001	t0001	g0001	AFR	ESN	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
HG02922	hp2	a0001	c0001	t0001	g0001	AFR	ESN	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
HG02965	hp1	a0001	c0001	t0001	g0001	AFR	ESN	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
HG02970	hp1	a0001	c0001	t0001	g0001	AFR	ESN	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
HG02970	hp2	a0001	c0001	t0001	g0002	AFR	ESN	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
HG03017	hp1	a0001	c0001	t0001	g0001	SAS	PJL	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
HG03041	hp1	a0001	c0001	t0001	g0001	AFR	GWD	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
HG03041	hp2	a0001	c0001	t0001	g0004	AFR	GWD	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
HG03098	hp1	a0001	c0001	t0001	g0001	AFR	MSL	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
HG03130	hp1	a0001	c0001	t0001	g0001	AFR	ESN	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
HG03139	hp1	a0001	c0001	t0001	g0001	AFR	ESN	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
HG03195	hp1	a0001	c0001	t0001	g0002	AFR	ESN	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
HG03195	hp2	a0001	c0001	t0001	g0001	AFR	ESN	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
HG03209	hp1	a0001	c0001	t0001	g0006	AFR	MSL	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
HG03225	hp1	a0001	c0001	t0001	g0001	AFR	MSL	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
HG03453	hp1	a0001	c0001	t0001	g0004	AFR	MSL	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
HG03453	hp2	a0001	c0001	t0001	g0001	AFR	MSL	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
HG03486	hp1	a0001	c0001	t0001	g0002	AFR	MSL	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
HG03486	hp2	a0001	c0001	t0001	g0004	AFR	MSL	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
HG03490	hp1	a0001	c0001	t0001	g0001	SAS	PJL	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
HG03491	hp1	a0001	c0001	t0001	g0001	SAS	PJL	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
HG03491	hp2	a0001	c0001	t0001	g0001	SAS	PJL	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
HG03492	hp1	a0001	c0001	t0001	g0001	SAS	PJL	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
HG03516	hp1	a0001	c0001	t0001	g0001	AFR	ESN	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
HG03516	hp2	a0001	c0001	t0001	g0001	AFR	ESN	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
HG03540	hp1	a0001	c0001	t0001	g0006	AFR	GWD	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
HG03540	hp2	a0001	c0001	t0001	g0004	AFR	GWD	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
HG03579	hp1	a0001	c0001	t0001	g0001	AFR	MSL	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
HG03654	hp1	a0001	c0001	t0001	g0001	SAS	PJL	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
HG03669	hp1	a0001	c0001	t0001	g0001	SAS	PJL	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
HG03669	hp2	a0001	c0001	t0001	g0001	SAS	PJL	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
HG03688	hp1	a0001	c0001	t0001	g0001	SAS	STU	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
HG03704	hp1	a0001	c0001	t0001	g0001	SAS	PJL	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
HG03704	hp2	a0001	c0001	t0001	g0001	SAS	PJL	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
HG03710	hp1	a0001	c0001	t0001	g0001	SAS	PJL	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
HG03834	hp1	a0001	c0001	t0001	g0001	SAS	BEB	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
HG03834	hp2	a0001	c0001	t0001	g0001	SAS	BEB	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
HG03927	hp1	a0001	c0001	t0001	g0001	SAS	BEB	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
HG03927	hp2	a0001	c0001	t0001	g0001	SAS	BEB	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
HG03942	hp1	a0001	c0001	t0001	g0016	SAS	BEB	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
HG04115	hp1	a0001	c0001	t0001	g0001	SAS	STU	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
HG04184	hp1	a0001	c0001	t0001	g0011	SAS	BEB	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
HG04184	hp2	a0001	c0001	t0001	g0001	SAS	BEB	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
HG04199	hp1	a0001	c0001	t0001	g0001	SAS	STU	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
HG04204	hp1	a0001	c0001	t0001	g0001	SAS	STU	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
HG04228	hp1	a0001	c0001	t0001	g0001	SAS	STU	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
NA18522	hp1	a0001	c0001	t0001	g0002	AFR	YRI	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
NA18612	hp1	a0001	c0001	t0001	g0003	EAS	CHB	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
NA18747	hp1	a0001	c0001	t0001	g0001	EAS	CHB	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
NA18906	hp1	a0001	c0001	t0001	g0002	AFR	YRI	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
NA18906	hp2	a0001	c0001	t0001	g0001	AFR	YRI	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
NA18940	hp1	a0001	c0001	t0001	g0001	EAS	JPT	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
NA18943	hp1	a0001	c0001	t0001	g0001	EAS	JPT	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
NA18944	hp1	a0001	c0001	t0001	g0001	EAS	JPT	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
NA18945	hp1	a0001	c0001	t0001	g0001	EAS	JPT	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
NA18951	hp1	a0001	c0001	t0001	g0001	EAS	JPT	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
NA18951	hp2	a0001	c0001	t0001	g0001	EAS	JPT	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
NA18952	hp1	a0001	c0001	t0001	g0001	EAS	JPT	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
NA18953	hp1	a0001	c0001	t0001	g0001	EAS	JPT	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
NA18954	hp1	a0001	c0001	t0001	g0001	EAS	JPT	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
NA18954	hp2	a0001	c0001	t0001	g0001	EAS	JPT	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
NA18956	hp1	a0001	c0001	t0001	g0001	EAS	JPT	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
NA18956	hp2	a0001	c0001	t0001	g0001	EAS	JPT	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
NA18959	hp1	a0001	c0001	t0001	g0001	EAS	JPT	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
NA18960	hp1	a0001	c0001	t0001	g0001	EAS	JPT	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
NA18961	hp1	a0001	c0001	t0001	g0001	EAS	JPT	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
NA18962	hp1	a0001	c0001	t0001	g0001	EAS	JPT	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
NA18965	hp1	a0001	c0001	t0001	g0003	EAS	JPT	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
NA18966	hp1	a0001	c0001	t0001	g0001	EAS	JPT	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
NA18967	hp1	a0001	c0001	t0001	g0001	EAS	JPT	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
NA18970	hp1	a0001	c0001	t0001	g0001	EAS	JPT	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
NA18971	hp1	a0001	c0001	t0001	g0001	EAS	JPT	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
NA18979	hp1	a0001	c0001	t0001	g0001	EAS	JPT	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
NA18979	hp2	a0001	c0001	t0001	g0001	EAS	JPT	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
NA18982	hp1	a0001	c0001	t0001	g0001	EAS	JPT	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
NA18983	hp1	a0001	c0001	t0001	g0001	EAS	JPT	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
NA18984	hp1	a0001	c0001	t0001	g0001	EAS	JPT	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
NA18985	hp1	a0001	c0001	t0001	g0010	EAS	JPT	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
NA18986	hp1	a0001	c0001	t0001	g0001	EAS	JPT	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
NA18988	hp1	a0001	c0001	t0001	g0001	EAS	JPT	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
NA18990	hp1	a0001	c0001	t0001	g0001	EAS	JPT	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
NA18994	hp1	a0001	c0001	t0001	g0001	EAS	JPT	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
NA18995	hp1	a0001	c0001	t0001	g0001	EAS	JPT	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
NA19000	hp1	a0001	c0001	t0001	g0001	EAS	JPT	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
NA19004	hp1	a0001	c0001	t0001	g0003	EAS	JPT	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
NA19005	hp1	a0001	c0001	t0001	g0001	EAS	JPT	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
NA19007	hp1	a0001	c0001	t0001	g0001	EAS	JPT	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
NA19009	hp1	a0001	c0001	t0001	g0001	EAS	JPT	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
NA19010	hp1	a0001	c0001	t0001	g0001	EAS	JPT	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
NA19010	hp2	a0001	c0001	t0001	g0001	EAS	JPT	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
NA19012	hp1	a0001	c0001	t0001	g0001	EAS	JPT	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
NA19030	hp1	a0001	c0001	t0001	g0001	AFR	LWK	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
NA19030	hp2	a0001	c0001	t0001	g0013	AFR	LWK	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
NA19043	hp1	a0001	c0001	t0001	g0001	AFR	LWK	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
NA19055	hp1	a0001	c0001	t0001	g0009	EAS	JPT	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
NA19056	hp1	a0001	c0001	t0001	g0001	EAS	JPT	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
NA19057	hp1	a0001	c0001	t0001	g0001	EAS	JPT	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
NA19057	hp2	a0001	c0001	t0001	g0001	EAS	JPT	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
NA19058	hp1	a0001	c0001	t0001	g0005	EAS	JPT	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
NA19062	hp1	a0003	c0002	t0002	g0024	EAS	JPT	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
NA19063	hp1	a0001	c0001	t0001	g0001	EAS	JPT	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
NA19064	hp1	a0001	c0001	t0001	g0001	EAS	JPT	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
NA19064	hp2	a0001	c0001	t0001	g0001	EAS	JPT	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
NA19066	hp1	a0001	c0001	t0001	g0001	EAS	JPT	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
NA19067	hp1	a0001	c0001	t0001	g0005	EAS	JPT	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
NA19068	hp1	a0001	c0001	t0001	g0001	EAS	JPT	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
NA19070	hp1	a0001	c0001	t0001	g0001	EAS	JPT	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
NA19072	hp1	a0001	c0001	t0001	g0022	EAS	JPT	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
NA19075	hp1	a0001	c0001	t0001	g0001	EAS	JPT	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
NA19076	hp1	a0001	c0001	t0001	g0001	EAS	JPT	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
NA19079	hp1	a0001	c0001	t0001	g0001	EAS	JPT	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
NA19082	hp1	a0001	c0001	t0001	g0001	EAS	JPT	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
NA19083	hp1	a0001	c0001	t0001	g0001	EAS	JPT	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
NA19085	hp1	a0001	c0001	t0001	g0001	EAS	JPT	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
NA19086	hp1	a0001	c0001	t0001	g0001	EAS	JPT	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
NA19088	hp1	a0001	c0001	t0001	g0003	EAS	JPT	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
NA19089	hp1	a0001	c0001	t0001	g0001	EAS	JPT	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
NA19091	hp1	a0001	c0001	t0001	g0001	EAS	JPT	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
NA20129	hp1	a0001	c0001	t0001	g0002	AFR	ASW	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
NA20129	hp2	a0001	c0001	t0001	g0001	AFR	ASW	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
NA20752	hp1	a0001	c0001	t0001	g0001	EUR	TSI	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
NA20805	hp1	a0001	c0001	t0001	g0001	EUR	TSI	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
NA20905	hp1	a0001	c0001	t0001	g0001	SAS	GIH	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
HG01123	hp1	a0001	c0001	t0001	g0001	AMR	CLM	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
HG01123	hp2	a0001	c0001	t0001	g0001	AMR	CLM	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
HG02109	hp1	a0001	c0001	t0001	g0005	AFR	ACB	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
HG02109	hp2	a0001	c0001	t0001	g0001	AFR	ACB	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
HG02486	hp1	a0001	c0001	t0001	g0002	AFR	ACB	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
HG02559	hp1	a0001	c0001	t0001	g0002	AFR	ACB	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
HG02559	hp2	a0001	c0001	t0001	g0006	AFR	ACB	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
HG03471	hp1	a0001	c0001	t0001	g0015	AFR	MSL	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
NA18955	hp1	a0001	c0001	t0001	g0001	EAS	JPT	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
NA21309	hp1	a0001	c0001	t0001	g0001	AFR	LWK	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
NA21309	hp2	a0001	c0001	t0001	g0002	AFR	LWK	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
homoSapiens_chm13v2	hp1	a0001	c0001	t0001	g0001	REF	REF	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235
homoSapiens_grch38	hp1	a0001	c0001	t0001	g0002	REF	REF	PLP2_chrX_49166898_49180235	PLP2	chrX	49166898	49180235

chr:pos	ref	alt	# # of ahapid:amino-acid(protein) level	ahapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	hgvs_p	genename	geneid	featuretype	featureid	transcript_biotype	rank	cdna cdna pos length	cds cds pos length	aa aa pos length	status	chr	pos
chrX:49171998	G G	GC GC	1	a0003 a0003	1	NA19062.hp1 NA19062.hp1	frameshift_variant&start_lost	HIGH	c.-1dupC c.-1dupC	p.Met1fs p.Met1fs	PLP2	ENSG00000102007.11	transcript	ENST00000376327.6	protein_coding	1/5	104/1103	1/459	1/152	INFO_REALIGN_3_PRIME	chrX	49171998
chrX:49173468	C C	CA CA	1	a0003 a0003	1	NA19062.hp1 NA19062.hp1	frameshift_variant	HIGH	c.334dupA c.334dupA	p.Ile112fs p.Ile112fs	PLP2	ENSG00000102007.11	transcript	ENST00000376327.6	protein_coding	3/5	438/1103	335/459	112/152	INFO_REALIGN_3_PRIME	chrX	49173468
chrX:49174395	C C	T T	1	a0002 a0002	1	HG02615.hp2 HG02615.hp2	missense_variant	MODERATE	c.406C>T c.406C>T	p.Arg136Trp p.Arg136Trp	PLP2	ENSG00000102007.11	transcript	ENST00000376327.6	protein_coding	4/5	509/1103	406/459	136/152		chrX	49174395

chr:pos	ref	alt	# # of chapid	chapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	hgvs_p	genename	geneid	featuretype	featureid	transcript_biotype	rank	cdna cdna pos length	cds cds pos length	aa aa pos length	distance	status	chr	pos

chr:pos	ref	alt	# # of thapid:transcript level	thapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	pos
chrX:49174973	T T	TG TG	1	a0003c0002t0002 a0003c0002t0002	1	NA19062.hp1 NA19062.hp1	3_prime_UTR_variant	MODIFIER	c.283dupG c.283dupG	PLP2	ENSG00000102007.11	transcript	ENST00000376327.6	protein_coding	5/5	284	INFO_REALIGN_3_PRIME	chrX	49174973
chrX:49174977	G G	A A	1	a0001c0001t0003 a0001c0001t0003	1	HG02451.hp1 HG02451.hp1	3_prime_UTR_variant	MODIFIER	c.283G>A c.283G>A	PLP2	ENSG00000102007.11	transcript	ENST00000376327.6	protein_coding	5/5	283		chrX	49174977
chrX:49175011	A A	AC AC	1	a0003c0002t0002 a0003c0002t0002	1	NA19062.hp1 NA19062.hp1	3_prime_UTR_variant	MODIFIER	c.320dupC c.320dupC	PLP2	ENSG00000102007.11	transcript	ENST00000376327.6	protein_coding	5/5	321	INFO_REALIGN_3_PRIME	chrX	49175011
chrX:49175161	G G	A A	1	a0001c0001t0004 a0001c0001t0004	1	HG02523.hp1 HG02523.hp1	3_prime_UTR_variant	MODIFIER	c.467G>A c.467G>A	PLP2	ENSG00000102007.11	transcript	ENST00000376327.6	protein_coding	5/5	467		chrX	49175161

chr:pos	ref	alt	# # of ghapid:genebody level	ghapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	genename	geneid	featuretype	featureid	genebody_biotype	rank	status	chr	pos
chrX:49172113	A A	AG AG	1	a0003c0002t0002g0024 a0003c0002t0002g0024	1	NA19062.hp1 NA19062.hp1	intron_variant	MODIFIER	c.96+19dupG c.96+19dupG	PLP2	ENSG00000102007.11	transcript	ENST00000376327.6	protein_coding	1/4	INFO_REALIGN_3_PRIME	chrX	49172113
chrX:49172131	G G	C C	2	a0001c0001t0001g0003 a0001c0001t0001g0007 a0001c0001t0001g0003 a0001c0001t0001g0007	9	HG01069.hp1 HG01071.hp2 HG01978.hp1 others(6): Show HG01069.hp1 HG01071.hp2 HG01978.hp1 HG02129.hp1 HG02148.hp1 NA18612.hp1 NA18965.hp1 NA19004.hp1 NA19088.hp1	intron_variant	MODIFIER	c.96+35G>C c.96+35G>C	PLP2	ENSG00000102007.11	transcript	ENST00000376327.6	protein_coding	1/4		chrX	49172131
chrX:49172132	G G	C C	1	a0001c0001t0001g0008 a0001c0001t0001g0008	1	HG01952.hp1 HG01952.hp1	intron_variant	MODIFIER	c.96+36G>C c.96+36G>C	PLP2	ENSG00000102007.11	transcript	ENST00000376327.6	protein_coding	1/4		chrX	49172132
chrX:49172135	T T	TG TG	1	a0003c0002t0002g0024 a0003c0002t0002g0024	1	NA19062.hp1 NA19062.hp1	intron_variant	MODIFIER	c.96+43dupG c.96+43dupG	PLP2	ENSG00000102007.11	transcript	ENST00000376327.6	protein_coding	1/4	INFO_REALIGN_3_PRIME	chrX	49172135
chrX:49172185	T T	TG TG	1	a0001c0001t0001g0023 a0001c0001t0001g0023	1	HG01261.hp1 HG01261.hp1	intron_variant	MODIFIER	c.96+91dupG c.96+91dupG	PLP2	ENSG00000102007.11	transcript	ENST00000376327.6	protein_coding	1/4	INFO_REALIGN_3_PRIME	chrX	49172185
chrX:49172208	G G	GT GT	1	a0001c0001t0001g0022 a0001c0001t0001g0022	1	NA19072.hp1 NA19072.hp1	intron_variant	MODIFIER	c.96+113dupT c.96+113dupT	PLP2	ENSG00000102007.11	transcript	ENST00000376327.6	protein_coding	1/4	INFO_REALIGN_3_PRIME	chrX	49172208
chrX:49172302	CG CG	C C	1	a0001c0001t0001g0022 a0001c0001t0001g0022	1	NA19072.hp1 NA19072.hp1	intron_variant	MODIFIER	c.96+210delG c.96+210delG	PLP2	ENSG00000102007.11	transcript	ENST00000376327.6	protein_coding	1/4	INFO_REALIGN_3_PRIME	chrX	49172302
chrX:49172371	T T	TG TG	1	a0003c0002t0002g0024 a0003c0002t0002g0024	1	NA19062.hp1 NA19062.hp1	intron_variant	MODIFIER	c.96+277dupG c.96+277dupG	PLP2	ENSG00000102007.11	transcript	ENST00000376327.6	protein_coding	1/4	INFO_REALIGN_3_PRIME	chrX	49172371
chrX:49172388	T T	TC TC	1	a0003c0002t0002g0024 a0003c0002t0002g0024	1	NA19062.hp1 NA19062.hp1	intron_variant	MODIFIER	c.96+295dupC c.96+295dupC	PLP2	ENSG00000102007.11	transcript	ENST00000376327.6	protein_coding	1/4	INFO_REALIGN_3_PRIME	chrX	49172388
chrX:49172439	TG TG	T T	1	a0001c0001t0001g0009 a0001c0001t0001g0009	1	NA19055.hp1 NA19055.hp1	intron_variant	MODIFIER	c.96+346delG c.96+346delG	PLP2	ENSG00000102007.11	transcript	ENST00000376327.6	protein_coding	1/4	INFO_REALIGN_3_PRIME	chrX	49172439
chrX:49172477	A A	AG AG	1	a0003c0002t0002g0024 a0003c0002t0002g0024	1	NA19062.hp1 NA19062.hp1	intron_variant	MODIFIER	c.96+384dupG c.96+384dupG	PLP2	ENSG00000102007.11	transcript	ENST00000376327.6	protein_coding	1/4	INFO_REALIGN_3_PRIME	chrX	49172477
chrX:49172495	G G	GC GC	3	a0001c0001t0001g0005 a0001c0001t0001g0010 a0003c0002t0002g0024 a0001c0001t0001g0005 a0001c0001t0001g0010 a0003c0002t0002g0024	5	HG02109.hp1 NA18985.hp1 NA19058.hp1 others(2): Show HG02109.hp1 NA18985.hp1 NA19058.hp1 NA19062.hp1 NA19067.hp1	intron_variant	MODIFIER	c.96+406dupC c.96+406dupC	PLP2	ENSG00000102007.11	transcript	ENST00000376327.6	protein_coding	1/4	INFO_REALIGN_3_PRIME	chrX	49172495
chrX:49172534	C C	T T	1	a0001c0001t0001g0021 a0001c0001t0001g0021	1	HG01433.hp1 HG01433.hp1	intron_variant	MODIFIER	c.96+438C>T c.96+438C>T	PLP2	ENSG00000102007.11	transcript	ENST00000376327.6	protein_coding	1/4		chrX	49172534
chrX:49172574	C C	CG CG	1	a0001c0001t0001g0009 a0001c0001t0001g0009	1	NA19055.hp1 NA19055.hp1	intron_variant	MODIFIER	c.96+481dupG c.96+481dupG	PLP2	ENSG00000102007.11	transcript	ENST00000376327.6	protein_coding	1/4	INFO_REALIGN_3_PRIME	chrX	49172574
chrX:49172606	C C	A A	2	a0001c0001t0001g0008 a0001c0001t0001g0011 a0001c0001t0001g0008 a0001c0001t0001g0011	2	HG01952.hp1 HG04184.hp1 HG01952.hp1 HG04184.hp1	intron_variant	MODIFIER	c.96+510C>A c.96+510C>A	PLP2	ENSG00000102007.11	transcript	ENST00000376327.6	protein_coding	1/4		chrX	49172606
chrX:49172644	A A	AAG AAG	1	a0001c0001t0001g0009 a0001c0001t0001g0009	1	NA19055.hp1 NA19055.hp1	intron_variant	MODIFIER	c.97-485_97-484insAG c.97-485_97-484insAG	PLP2	ENSG00000102007.11	transcript	ENST00000376327.6	protein_coding	1/4		chrX	49172644
chrX:49172648	G G	T T	1	a0001c0001t0001g0009 a0001c0001t0001g0009	1	NA19055.hp1 NA19055.hp1	intron_variant	MODIFIER	c.97-481G>T c.97-481G>T	PLP2	ENSG00000102007.11	transcript	ENST00000376327.6	protein_coding	1/4		chrX	49172648
chrX:49172906	T T	C C	1	a0001c0001t0001g0012 a0001c0001t0001g0012	1	HG00544.hp1 HG00544.hp1	intron_variant	MODIFIER	c.97-223T>C c.97-223T>C	PLP2	ENSG00000102007.11	transcript	ENST00000376327.6	protein_coding	1/4		chrX	49172906
chrX:49172994	TA TA	T T	1	a0001c0001t0001g0009 a0001c0001t0001g0009	1	NA19055.hp1 NA19055.hp1	intron_variant	MODIFIER	c.97-130delA c.97-130delA	PLP2	ENSG00000102007.11	transcript	ENST00000376327.6	protein_coding	1/4	INFO_REALIGN_3_PRIME	chrX	49172994
chrX:49173633	G G	GT GT	1	a0003c0002t0002g0024 a0003c0002t0002g0024	1	NA19062.hp1 NA19062.hp1	intron_variant	MODIFIER	c.345+154dupT c.345+154dupT	PLP2	ENSG00000102007.11	transcript	ENST00000376327.6	protein_coding	3/4	INFO_REALIGN_3_PRIME	chrX	49173633
chrX:49173642	C C	T T	1	a0001c0001t0001g0020 a0001c0001t0001g0020	1	HG02056.hp1 HG02056.hp1	intron_variant	MODIFIER	c.345+159C>T c.345+159C>T	PLP2	ENSG00000102007.11	transcript	ENST00000376327.6	protein_coding	3/4		chrX	49173642
chrX:49173707	C C	CA CA	1	a0003c0002t0002g0024 a0003c0002t0002g0024	1	NA19062.hp1 NA19062.hp1	intron_variant	MODIFIER	c.345+227dupA c.345+227dupA	PLP2	ENSG00000102007.11	transcript	ENST00000376327.6	protein_coding	3/4	INFO_REALIGN_3_PRIME	chrX	49173707
chrX:49173730	T T	C C	23	a0001c0001t0001g0001 a0001c0001t0001g0003 a0001c0001t0001g0004 others(20): Show a0001c0001t0001g0001 a0001c0001t0001g0003 a0001c0001t0001g0004 a0001c0001t0001g0005 a0001c0001t0001g0006 a0001c0001t0001g0007 a0001c0001t0001g0008 a0001c0001t0001g0009 a0001c0001t0001g0010 a0001c0001t0001g0011 a0001c0001t0001g0012 a0001c0001t0001g0013 a0001c0001t0001g0014 a0001c0001t0001g0015 a0001c0001t0001g0016 a0001c0001t0001g0017 a0001c0001t0001g0020 a0001c0001t0001g0021 a0001c0001t0001g0022 a0001c0001t0001g0023 a0001c0001t0003g0001 a0001c0001t0004g0001 a0003c0002t0002g0024	234	HG00140.hp1 HG00280.hp1 HG00323.hp1 others(231): Show HG00140.hp1 HG00280.hp1 HG00323.hp1 HG00323.hp2 HG00408.hp1 HG00408.hp2 HG00438.hp1 HG00438.hp2 HG00544.hp1 HG00544.hp2 HG00558.hp1 HG00558.hp2 HG00609.hp1 HG00621.hp1 HG00639.hp1 HG00639.hp2 HG00642.hp1 HG00673.hp1 HG00735.hp2 HG00738.hp1 HG00741.hp1 HG00741.hp2 HG01069.hp1 HG01070.hp1 HG01070.hp2 HG01071.hp1 HG01071.hp2 HG01074.hp1 HG01081.hp1 HG01081.hp2 HG01099.hp1 HG01106.hp1 HG01109.hp1 HG01123.hp1 HG01123.hp2 HG01168.hp1 HG01168.hp2 HG01192.hp1 HG01255.hp1 HG01256.hp1 HG01258.hp1 HG01261.hp1 HG01346.hp1 HG01346.hp2 HG01358.hp1 HG01361.hp1 HG01361.hp2 HG01433.hp1 HG01515.hp1 HG01516.hp1 HG01516.hp2 HG01517.hp1 HG01517.hp2 HG01884.hp2 HG01891.hp2 HG01928.hp1 HG01934.hp1 HG01943.hp1 HG01952.hp1 HG01975.hp1 HG01975.hp2 HG01978.hp1 HG01978.hp2 HG01981.hp1 HG01981.hp2 HG01993.hp1 HG01993.hp2 HG02015.hp1 HG02027.hp1 HG02040.hp1 HG02055.hp1 HG02056.hp1 HG02071.hp1 HG02074.hp1 HG02083.hp1 HG02109.hp1 HG02109.hp2 HG02129.hp1 HG02132.hp1 HG02135.hp1 HG02148.hp1 HG02148.hp2 HG02155.hp1 HG02155.hp2 HG02257.hp1 HG02257.hp2 HG02258.hp1 HG02273.hp1 HG02273.hp2 HG02280.hp1 HG02280.hp2 HG02300.hp1 HG02451.hp1 HG02451.hp2 HG02523.hp1 HG02523.hp2 HG02559.hp2 HG02602.hp1 HG02622.hp1 HG02622.hp2 HG02647.hp1 HG02683.hp1 HG02683.hp2 HG02698.hp1 HG02723.hp1 HG02723.hp2 HG02735.hp1 HG02738.hp1 HG02809.hp2 HG02818.hp2 HG02886.hp1 HG02895.hp1 HG02897.hp1 HG02922.hp1 HG02922.hp2 HG02965.hp1 HG02970.hp1 HG03017.hp1 HG03041.hp1 HG03041.hp2 HG03098.hp1 HG03130.hp1 HG03139.hp1 HG03195.hp2 HG03209.hp1 HG03225.hp1 HG03453.hp1 HG03453.hp2 HG03471.hp1 HG03486.hp2 HG03490.hp1 HG03491.hp1 HG03491.hp2 HG03492.hp1 HG03516.hp1 HG03516.hp2 HG03540.hp1 HG03540.hp2 HG03579.hp1 HG03654.hp1 HG03669.hp1 HG03669.hp2 HG03688.hp1 HG03704.hp1 HG03704.hp2 HG03710.hp1 HG03834.hp1 HG03834.hp2 HG03927.hp1 HG03927.hp2 HG03942.hp1 HG04115.hp1 HG04184.hp1 HG04184.hp2 HG04199.hp1 HG04204.hp1 HG04228.hp1 NA18612.hp1 NA18747.hp1 NA18906.hp2 NA18940.hp1 NA18943.hp1 NA18944.hp1 NA18945.hp1 NA18951.hp1 NA18951.hp2 NA18952.hp1 NA18953.hp1 NA18954.hp1 NA18954.hp2 NA18955.hp1 NA18956.hp1 NA18956.hp2 NA18959.hp1 NA18960.hp1 NA18961.hp1 NA18962.hp1 NA18965.hp1 NA18966.hp1 NA18967.hp1 NA18970.hp1 NA18971.hp1 NA18979.hp1 NA18979.hp2 NA18982.hp1 NA18983.hp1 NA18984.hp1 NA18985.hp1 NA18986.hp1 NA18988.hp1 NA18990.hp1 NA18994.hp1 NA18995.hp1 NA19000.hp1 NA19004.hp1 NA19005.hp1 NA19007.hp1 NA19009.hp1 NA19010.hp1 NA19010.hp2 NA19012.hp1 NA19030.hp1 NA19030.hp2 NA19043.hp1 NA19055.hp1 NA19056.hp1 NA19057.hp1 NA19057.hp2 NA19058.hp1 NA19062.hp1 NA19063.hp1 NA19064.hp1 NA19064.hp2 NA19066.hp1 NA19067.hp1 NA19068.hp1 NA19070.hp1 NA19072.hp1 NA19075.hp1 NA19076.hp1 NA19079.hp1 NA19082.hp1 NA19083.hp1 NA19085.hp1 NA19086.hp1 NA19088.hp1 NA19089.hp1 NA19091.hp1 NA20129.hp2 NA20752.hp1 NA20805.hp1 NA20905.hp1 NA21309.hp1 homoSapiens_chm13v2.hp1	intron_variant	MODIFIER	c.345+247T>C c.345+247T>C	PLP2	ENSG00000102007.11	transcript	ENST00000376327.6	protein_coding	3/4		chrX	49173730
chrX:49173774	G G	GA GA	1	a0001c0001t0001g0009 a0001c0001t0001g0009	1	NA19055.hp1 NA19055.hp1	intron_variant	MODIFIER	c.345+294dupA c.345+294dupA	PLP2	ENSG00000102007.11	transcript	ENST00000376327.6	protein_coding	3/4	INFO_REALIGN_3_PRIME	chrX	49173774
chrX:49173779	T T	TG TG	1	a0001c0001t0001g0010 a0001c0001t0001g0010	1	NA18985.hp1 NA18985.hp1	intron_variant	MODIFIER	c.345+300dupG c.345+300dupG	PLP2	ENSG00000102007.11	transcript	ENST00000376327.6	protein_coding	3/4	INFO_REALIGN_3_PRIME	chrX	49173779
chrX:49173873	C C	A A	1	a0001c0001t0001g0013 a0001c0001t0001g0013	1	NA19030.hp2 NA19030.hp2	intron_variant	MODIFIER	c.345+390C>A c.345+390C>A	PLP2	ENSG00000102007.11	transcript	ENST00000376327.6	protein_coding	3/4		chrX	49173873
chrX:49173926	CG CG	C C	1	a0001c0001t0001g0009 a0001c0001t0001g0009	1	NA19055.hp1 NA19055.hp1	intron_variant	MODIFIER	c.346-406delG c.346-406delG	PLP2	ENSG00000102007.11	transcript	ENST00000376327.6	protein_coding	3/4	INFO_REALIGN_3_PRIME	chrX	49173926
chrX:49173934	G G	A A	1	a0001c0001t0001g0018 a0001c0001t0001g0018	1	HG02630.hp1 HG02630.hp1	intron_variant	MODIFIER	c.346-401G>A c.346-401G>A	PLP2	ENSG00000102007.11	transcript	ENST00000376327.6	protein_coding	3/4		chrX	49173934
chrX:49173951	T T	TC TC	1	a0003c0002t0002g0024 a0003c0002t0002g0024	1	NA19062.hp1 NA19062.hp1	intron_variant	MODIFIER	c.346-381dupC c.346-381dupC	PLP2	ENSG00000102007.11	transcript	ENST00000376327.6	protein_coding	3/4	INFO_REALIGN_3_PRIME	chrX	49173951
chrX:49174076	T T	TC TC	1	a0003c0002t0002g0024 a0003c0002t0002g0024	1	NA19062.hp1 NA19062.hp1	intron_variant	MODIFIER	c.346-258dupC c.346-258dupC	PLP2	ENSG00000102007.11	transcript	ENST00000376327.6	protein_coding	3/4	INFO_REALIGN_3_PRIME	chrX	49174076
chrX:49174079	C C	CA CA	6	a0001c0001t0001g0004 a0001c0001t0001g0007 a0001c0001t0001g0009 others(3): Show a0001c0001t0001g0004 a0001c0001t0001g0007 a0001c0001t0001g0009 a0001c0001t0001g0013 a0001c0001t0001g0015 a0003c0002t0002g0024	9	HG01978.hp1 HG03041.hp2 HG03453.hp1 others(6): Show HG01978.hp1 HG03041.hp2 HG03453.hp1 HG03471.hp1 HG03486.hp2 HG03540.hp2 NA19030.hp2 NA19055.hp1 NA19062.hp1	intron_variant	MODIFIER	c.346-243dupA c.346-243dupA	PLP2	ENSG00000102007.11	transcript	ENST00000376327.6	protein_coding	3/4	INFO_REALIGN_3_PRIME	chrX	49174079
chrX:49174079	C C	CAA CAA	1	a0001c0001t0001g0014 a0001c0001t0001g0014	1	HG02622.hp2 HG02622.hp2	intron_variant	MODIFIER	c.346-244_346-243dup others(2): Show c.346-244_346-243dupAA	PLP2	ENSG00000102007.11	transcript	ENST00000376327.6	protein_coding	3/4	INFO_REALIGN_3_PRIME	chrX	49174079
chrX:49174079	CA CA	C C	1	a0001c0001t0001g0017 a0001c0001t0001g0017	1	HG01168.hp1 HG01168.hp1	intron_variant	MODIFIER	c.346-243delA c.346-243delA	PLP2	ENSG00000102007.11	transcript	ENST00000376327.6	protein_coding	3/4	INFO_REALIGN_3_PRIME	chrX	49174079
chrX:49174109	G G	GC GC	2	a0001c0001t0001g0009 a0003c0002t0002g0024 a0001c0001t0001g0009 a0003c0002t0002g0024	2	NA19055.hp1 NA19062.hp1 NA19055.hp1 NA19062.hp1	intron_variant	MODIFIER	c.346-221dupC c.346-221dupC	PLP2	ENSG00000102007.11	transcript	ENST00000376327.6	protein_coding	3/4	INFO_REALIGN_3_PRIME	chrX	49174109
chrX:49174134	T T	TG TG	1	a0003c0002t0002g0024 a0003c0002t0002g0024	1	NA19062.hp1 NA19062.hp1	intron_variant	MODIFIER	c.346-199dupG c.346-199dupG	PLP2	ENSG00000102007.11	transcript	ENST00000376327.6	protein_coding	3/4	INFO_REALIGN_3_PRIME	chrX	49174134
chrX:49174172	T T	TG TG	1	a0003c0002t0002g0024 a0003c0002t0002g0024	1	NA19062.hp1 NA19062.hp1	intron_variant	MODIFIER	c.346-159dupG c.346-159dupG	PLP2	ENSG00000102007.11	transcript	ENST00000376327.6	protein_coding	3/4	INFO_REALIGN_3_PRIME	chrX	49174172
chrX:49174278	A A	AG AG	1	a0003c0002t0002g0024 a0003c0002t0002g0024	1	NA19062.hp1 NA19062.hp1	intron_variant	MODIFIER	c.346-56dupG c.346-56dupG	PLP2	ENSG00000102007.11	transcript	ENST00000376327.6	protein_coding	3/4	INFO_REALIGN_3_PRIME	chrX	49174278
chrX:49174330	C C	G G	1	a0001c0001t0001g0015 a0001c0001t0001g0015	1	HG03471.hp1 HG03471.hp1	splice_region_variant&intron_variant	LOW	c.346-5C>G c.346-5C>G	PLP2	ENSG00000102007.11	transcript	ENST00000376327.6	protein_coding	3/4		chrX	49174330
chrX:49174429	A A	AGT AGT	22	a0001c0001t0001g0001 a0001c0001t0001g0003 a0001c0001t0001g0004 others(19): Show a0001c0001t0001g0001 a0001c0001t0001g0003 a0001c0001t0001g0004 a0001c0001t0001g0005 a0001c0001t0001g0006 a0001c0001t0001g0007 a0001c0001t0001g0008 a0001c0001t0001g0009 a0001c0001t0001g0010 a0001c0001t0001g0011 a0001c0001t0001g0012 a0001c0001t0001g0013 a0001c0001t0001g0014 a0001c0001t0001g0015 a0001c0001t0001g0017 a0001c0001t0001g0020 a0001c0001t0001g0021 a0001c0001t0001g0022 a0001c0001t0001g0023 a0001c0001t0003g0001 a0001c0001t0004g0001 a0003c0002t0002g0024	233	HG00140.hp1 HG00280.hp1 HG00323.hp1 others(230): Show HG00140.hp1 HG00280.hp1 HG00323.hp1 HG00323.hp2 HG00408.hp1 HG00408.hp2 HG00438.hp1 HG00438.hp2 HG00544.hp1 HG00544.hp2 HG00558.hp1 HG00558.hp2 HG00609.hp1 HG00621.hp1 HG00639.hp1 HG00639.hp2 HG00642.hp1 HG00673.hp1 HG00735.hp2 HG00738.hp1 HG00741.hp1 HG00741.hp2 HG01069.hp1 HG01070.hp1 HG01070.hp2 HG01071.hp1 HG01071.hp2 HG01074.hp1 HG01081.hp1 HG01081.hp2 HG01099.hp1 HG01106.hp1 HG01109.hp1 HG01123.hp1 HG01123.hp2 HG01168.hp1 HG01168.hp2 HG01192.hp1 HG01255.hp1 HG01256.hp1 HG01258.hp1 HG01261.hp1 HG01346.hp1 HG01346.hp2 HG01358.hp1 HG01361.hp1 HG01361.hp2 HG01433.hp1 HG01515.hp1 HG01516.hp1 HG01516.hp2 HG01517.hp1 HG01517.hp2 HG01884.hp2 HG01891.hp2 HG01928.hp1 HG01934.hp1 HG01943.hp1 HG01952.hp1 HG01975.hp1 HG01975.hp2 HG01978.hp1 HG01978.hp2 HG01981.hp1 HG01981.hp2 HG01993.hp1 HG01993.hp2 HG02015.hp1 HG02027.hp1 HG02040.hp1 HG02055.hp1 HG02056.hp1 HG02071.hp1 HG02074.hp1 HG02083.hp1 HG02109.hp1 HG02109.hp2 HG02129.hp1 HG02132.hp1 HG02135.hp1 HG02148.hp1 HG02148.hp2 HG02155.hp1 HG02155.hp2 HG02257.hp1 HG02257.hp2 HG02258.hp1 HG02273.hp1 HG02273.hp2 HG02280.hp1 HG02280.hp2 HG02300.hp1 HG02451.hp1 HG02451.hp2 HG02523.hp1 HG02523.hp2 HG02559.hp2 HG02602.hp1 HG02622.hp1 HG02622.hp2 HG02647.hp1 HG02683.hp1 HG02683.hp2 HG02698.hp1 HG02723.hp1 HG02723.hp2 HG02735.hp1 HG02738.hp1 HG02809.hp2 HG02818.hp2 HG02886.hp1 HG02895.hp1 HG02897.hp1 HG02922.hp1 HG02922.hp2 HG02965.hp1 HG02970.hp1 HG03017.hp1 HG03041.hp1 HG03041.hp2 HG03098.hp1 HG03130.hp1 HG03139.hp1 HG03195.hp2 HG03209.hp1 HG03225.hp1 HG03453.hp1 HG03453.hp2 HG03471.hp1 HG03486.hp2 HG03490.hp1 HG03491.hp1 HG03491.hp2 HG03492.hp1 HG03516.hp1 HG03516.hp2 HG03540.hp1 HG03540.hp2 HG03579.hp1 HG03654.hp1 HG03669.hp1 HG03669.hp2 HG03688.hp1 HG03704.hp1 HG03704.hp2 HG03710.hp1 HG03834.hp1 HG03834.hp2 HG03927.hp1 HG03927.hp2 HG04115.hp1 HG04184.hp1 HG04184.hp2 HG04199.hp1 HG04204.hp1 HG04228.hp1 NA18612.hp1 NA18747.hp1 NA18906.hp2 NA18940.hp1 NA18943.hp1 NA18944.hp1 NA18945.hp1 NA18951.hp1 NA18951.hp2 NA18952.hp1 NA18953.hp1 NA18954.hp1 NA18954.hp2 NA18955.hp1 NA18956.hp1 NA18956.hp2 NA18959.hp1 NA18960.hp1 NA18961.hp1 NA18962.hp1 NA18965.hp1 NA18966.hp1 NA18967.hp1 NA18970.hp1 NA18971.hp1 NA18979.hp1 NA18979.hp2 NA18982.hp1 NA18983.hp1 NA18984.hp1 NA18985.hp1 NA18986.hp1 NA18988.hp1 NA18990.hp1 NA18994.hp1 NA18995.hp1 NA19000.hp1 NA19004.hp1 NA19005.hp1 NA19007.hp1 NA19009.hp1 NA19010.hp1 NA19010.hp2 NA19012.hp1 NA19030.hp1 NA19030.hp2 NA19043.hp1 NA19055.hp1 NA19056.hp1 NA19057.hp1 NA19057.hp2 NA19058.hp1 NA19062.hp1 NA19063.hp1 NA19064.hp1 NA19064.hp2 NA19066.hp1 NA19067.hp1 NA19068.hp1 NA19070.hp1 NA19072.hp1 NA19075.hp1 NA19076.hp1 NA19079.hp1 NA19082.hp1 NA19083.hp1 NA19085.hp1 NA19086.hp1 NA19088.hp1 NA19089.hp1 NA19091.hp1 NA20129.hp2 NA20752.hp1 NA20805.hp1 NA20905.hp1 NA21309.hp1 homoSapiens_chm13v2.hp1	intron_variant	MODIFIER	c.436+17_436+18dupGT c.436+17_436+18dupGT	PLP2	ENSG00000102007.11	transcript	ENST00000376327.6	protein_coding	4/4	INFO_REALIGN_3_PRIME	chrX	49174429
chrX:49174429	A A	AGTGT AGTGT	1	a0001c0001t0001g0016 a0001c0001t0001g0016	1	HG03942.hp1 HG03942.hp1	intron_variant	MODIFIER	c.436+15_436+18dupGT others(2): Show c.436+15_436+18dupGTGT	PLP2	ENSG00000102007.11	transcript	ENST00000376327.6	protein_coding	4/4	INFO_REALIGN_3_PRIME	chrX	49174429
chrX:49174480	G G	GA GA	1	a0003c0002t0002g0024 a0003c0002t0002g0024	1	NA19062.hp1 NA19062.hp1	intron_variant	MODIFIER	c.436+60dupA c.436+60dupA	PLP2	ENSG00000102007.11	transcript	ENST00000376327.6	protein_coding	4/4	INFO_REALIGN_3_PRIME	chrX	49174480
chrX:49174572	C C	T T	2	a0001c0001t0001g0013 a0001c0001t0001g0019 a0001c0001t0001g0013 a0001c0001t0001g0019	2	HG00735.hp1 NA19030.hp2 HG00735.hp1 NA19030.hp2	intron_variant	MODIFIER	c.437-100C>T c.437-100C>T	PLP2	ENSG00000102007.11	transcript	ENST00000376327.6	protein_coding	4/4		chrX	49174572
chrX:49174617	T T	TA TA	1	a0003c0002t0002g0024 a0003c0002t0002g0024	1	NA19062.hp1 NA19062.hp1	intron_variant	MODIFIER	c.437-49dupA c.437-49dupA	PLP2	ENSG00000102007.11	transcript	ENST00000376327.6	protein_coding	4/4	INFO_REALIGN_3_PRIME	chrX	49174617
chrX:49174632	T T	C C	1	a0001c0001t0001g0006 a0001c0001t0001g0006	3	HG02559.hp2 HG03209.hp1 HG03540.hp1 HG02559.hp2 HG03209.hp1 HG03540.hp1	intron_variant	MODIFIER	c.437-40T>C c.437-40T>C	PLP2	ENSG00000102007.11	transcript	ENST00000376327.6	protein_coding	4/4		chrX	49174632
chrX:49174655	C C	CT CT	1	a0003c0002t0002g0024 a0003c0002t0002g0024	1	NA19062.hp1 NA19062.hp1	intron_variant	MODIFIER	c.437-13dupT c.437-13dupT	PLP2	ENSG00000102007.11	transcript	ENST00000376327.6	protein_coding	4/4	INFO_REALIGN_3_PRIME	chrX	49174655

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🧬 Gene Summary

AAmino acid(protein) Level Haplotype Info (Total: 3)

CCoding Level Haplotype Info (Total: 3)

TTranscript Level Haplotype Info (Total: 4)

GGenebody Level Haplotype Info (Total: 24)

A C AC Level (Amino Acid + Coding) Haplotype Info (Total: 3)

A C T ACT Level (Amino Acid + Coding + Transcript) Haplotype Info (Total: 5)

A C T G ACTG Level (Amino Acid + Coding + Transcript + Genebody) Haplotype Info (Total: 27)

Haplotype Details by Sample (Haploid Level) (Total: 260)

AAmino acid(protein) Level Haplotype Related Variants (Effect to Protein Coding Variants) (Total: 3)

CCoding Level Variants (Synonymous Mutations) (Total: 0)

TTranscript Level Haplotype Variants (5'UTR+3'UTR) (Total: 4)

GGenebody Level Haplotype Variants (Intron) (Total: 45)

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Annotation (Repeats)

Annotation (SNP Array)