JoGo LogoJoint Open Genome and Omics Platform (JoGo)
  • Home
    • General
    • Gene
    • Region
    • Variant
    • Haplotype
    • Haplotype by sample
    • ClinVar
    • GWASCatalog
    • GTEx
    • HaplotypeQTL
    • Haplotype
    • Position
    • Clinvar
    • Gene
    • Variant
    • Haplotype
    • Sample
    • FAQ
    • Contact
    • Fundings
    • Developer
    • ChIP-Atlas PeakBrowser
    • ToGoVAR
    • MGeND
    • Nagasaki Lab

ALDH2_chr12_111761933_111822532 / BRCA1_chr17_43039295_43130364 etc.

  Error connecting to IGV?   HOXA5_chr7_27136052_27148681  HOXA5_chr7_27136052_27148681 (clean+top1000)

Multiple Alignments (by translate haplotype frequency)Multiple Alignments (by aa haplotype frequency) Multiple Alignments (by translate haplotype similarity)Multiple Alignments (by aa haplotype similarity)

Item Value
geneid 3202
ensemblid ENSG00000106004.5
hgncid 5106
symbol HOXA5
name homeobox A5
refseq_nuc NM_019102.4
refseq_prot NP_061975.2
ensembl_nuc ENST00000222726.4
ensembl_prot ENSP00000222726.3
mane_status MANE Select
chr chr7
start 27141052
end 27143681
strand -
ver v1.2
region chr7:27141052-27143681
region5000 chr7:27136052-27148681
regionname0 HOXA5_chr7_27141052_27143681
regionname5000 HOXA5_chr7_27136052_27148681

ahapid grch38/
chm13v2 		alen total AFR AMR EAS EUR SAS JPT regionname genename aa chr start end
a0000 0/0 0 1 0 0 1 0 0 0 HOXA5_chr7_27136052_27148681 HOXA5 copy fasta chr7 27136052 27148681
a0001 1/1 270 395 86 74 179 12 42 134 HOXA5_chr7_27136052_27148681 HOXA5 copy fasta chr7 27136052 27148681
a0002 0/0 270 2 0 0 2 0 0 2 HOXA5_chr7_27136052_27148681 HOXA5 copy fasta chr7 27136052 27148681

chapid grch38/
chm13v2 		alen clen total AFR AMR EAS EUR SAS regionname genename cseq chr start end
c0001 1/1 813 394 85 74 179 12 42 HOXA5_chr7_27136052_27148681 HOXA5 copy fasta chr7 27136052 27148681
c0002 0/0 813 2 0 0 2 0 0 HOXA5_chr7_27136052_27148681 HOXA5 copy fasta chr7 27136052 27148681
c0003 0/0 781 1 0 0 1 0 0 HOXA5_chr7_27136052_27148681 HOXA5 copy fasta chr7 27136052 27148681
c0004 0/0 813 1 1 0 0 0 0 HOXA5_chr7_27136052_27148681 HOXA5 copy fasta chr7 27136052 27148681

thapid grch38
chm13v2 		tlen total AFR AMR EAS EUR SAS regionname genename tseq chr start end
t0001 0/0 857 124 11 15 77 5 16 HOXA5_chr7_27136052_27148681 HOXA5 copy fasta chr7 27136052 27148681
t0002 0/0 856 106 5 28 56 4 13 HOXA5_chr7_27136052_27148681 HOXA5 copy fasta chr7 27136052 27148681
t0003 0/0 857 49 7 16 26 0 0 HOXA5_chr7_27136052_27148681 HOXA5 copy fasta chr7 27136052 27148681
t0004 1/0 858 26 16 1 2 0 6 HOXA5_chr7_27136052_27148681 HOXA5 copy fasta chr7 27136052 27148681
t0005 0/0 856 23 15 2 3 2 1 HOXA5_chr7_27136052_27148681 HOXA5 copy fasta chr7 27136052 27148681
t0006 0/0 858 14 3 5 4 0 2 HOXA5_chr7_27136052_27148681 HOXA5 copy fasta chr7 27136052 27148681
t0007 0/1 859 11 5 1 3 0 1 HOXA5_chr7_27136052_27148681 HOXA5 copy fasta chr7 27136052 27148681
t0008 0/0 859 8 6 0 1 0 1 HOXA5_chr7_27136052_27148681 HOXA5 copy fasta chr7 27136052 27148681
t0009 0/0 855 7 2 0 4 1 0 HOXA5_chr7_27136052_27148681 HOXA5 copy fasta chr7 27136052 27148681
t0010 0/0 856 5 0 0 5 0 0 HOXA5_chr7_27136052_27148681 HOXA5 copy fasta chr7 27136052 27148681
t0011 0/0 857 4 2 2 0 0 0 HOXA5_chr7_27136052_27148681 HOXA5 copy fasta chr7 27136052 27148681
t0012 0/0 855 4 4 0 0 0 0 HOXA5_chr7_27136052_27148681 HOXA5 copy fasta chr7 27136052 27148681
t0013 0/0 856 4 0 2 0 0 2 HOXA5_chr7_27136052_27148681 HOXA5 copy fasta chr7 27136052 27148681
t0014 0/0 857 3 3 0 0 0 0 HOXA5_chr7_27136052_27148681 HOXA5 copy fasta chr7 27136052 27148681
t0015 0/0 857 3 3 0 0 0 0 HOXA5_chr7_27136052_27148681 HOXA5 copy fasta chr7 27136052 27148681
t0016 0/0 858 2 1 1 0 0 0 HOXA5_chr7_27136052_27148681 HOXA5 copy fasta chr7 27136052 27148681
t0017 0/0 858 1 1 0 0 0 0 HOXA5_chr7_27136052_27148681 HOXA5 copy fasta chr7 27136052 27148681
t0018 0/0 857 1 0 1 0 0 0 HOXA5_chr7_27136052_27148681 HOXA5 copy fasta chr7 27136052 27148681
t0019 0/0 844 1 1 0 0 0 0 HOXA5_chr7_27136052_27148681 HOXA5 copy fasta chr7 27136052 27148681
t0020 0/0 858 1 1 0 0 0 0 HOXA5_chr7_27136052_27148681 HOXA5 copy fasta chr7 27136052 27148681
t0021 0/0 829 1 0 0 1 0 0 HOXA5_chr7_27136052_27148681 HOXA5 copy fasta chr7 27136052 27148681

ghapid grch38/
chm13v2 		total AFR AMR EAS EUR SAS regionname genename chr start end
g0001 0/0 100 11 12 60 3 14 HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
g0002 0/0 70 5 25 26 3 11 HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
g0003 0/0 42 3 14 25 0 0 HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
g0004 0/0 33 0 3 28 1 1 HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
g0005 0/0 18 12 1 2 2 1 HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
g0006 1/0 13 7 1 2 0 2 HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
g0007 0/0 10 3 2 3 0 2 HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
g0008 0/0 10 0 1 8 0 1 HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
g0009 0/0 9 9 0 0 0 0 HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
g0010 0/0 5 0 0 5 0 0 HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
g0011 0/0 5 2 0 3 0 0 HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
g0012 0/0 5 4 0 0 0 1 HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
g0013 0/0 5 4 1 0 0 0 HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
g0014 0/0 4 2 2 0 0 0 HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
g0015 0/0 4 4 0 0 0 0 HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
g0016 0/0 4 0 2 0 0 2 HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
g0017 0/0 4 1 0 2 0 1 HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
g0018 0/0 4 0 0 4 0 0 HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
g0019 0/0 4 4 0 0 0 0 HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
g0020 0/0 3 3 0 0 0 0 HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
g0021 0/0 3 3 0 0 0 0 HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
g0022 0/0 3 3 0 0 0 0 HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
g0023 0/0 3 0 2 0 1 0 HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
g0024 0/0 3 0 0 0 0 3 HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
g0025 0/0 2 0 0 2 0 0 HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
g0026 0/0 2 0 0 1 1 0 HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
g0027 0/0 2 1 0 1 0 0 HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
g0028 0/0 2 0 0 1 1 0 HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
g0029 0/0 2 0 1 1 0 0 HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
g0030 0/1 2 0 1 0 0 0 HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
g0031 0/0 1 0 0 1 0 0 HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
g0032 0/0 1 0 1 0 0 0 HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
g0033 0/0 1 0 0 1 0 0 HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
g0034 0/0 1 1 0 0 0 0 HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
g0035 0/0 1 0 0 1 0 0 HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
g0036 0/0 1 0 0 1 0 0 HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
g0037 0/0 1 0 0 1 0 0 HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
g0038 0/0 1 1 0 0 0 0 HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
g0039 0/0 1 0 0 0 0 1 HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
g0040 0/0 1 0 0 0 0 1 HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
g0041 0/0 1 0 1 0 0 0 HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
g0042 0/0 1 0 1 0 0 0 HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
g0043 0/0 1 1 0 0 0 0 HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
g0044 0/0 1 0 0 1 0 0 HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
g0045 0/0 1 0 1 0 0 0 HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
g0046 0/0 1 0 0 1 0 0 HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
g0047 0/0 1 0 1 0 0 0 HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
g0048 0/0 1 0 1 0 0 0 HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
g0049 0/0 1 0 0 1 0 0 HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
g0050 0/0 1 1 0 0 0 0 HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
g0051 0/0 1 0 0 0 0 1 HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
g0052 0/0 1 1 0 0 0 0 HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681

achapid grch38/
chm13v2 		alen clen total AFR AMR EAS EUR SAS regionname genename cseq chr start end
a0000c0003 0/0 781 1 0 0 1 0 0 HOXA5_chr7_27136052_27148681 HOXA5 copy fasta chr7 27136052 27148681
a0001c0001 1/1 813 394 85 74 179 12 42 HOXA5_chr7_27136052_27148681 HOXA5 copy fasta chr7 27136052 27148681
a0001c0004 0/0 813 1 1 0 0 0 0 HOXA5_chr7_27136052_27148681 HOXA5 copy fasta chr7 27136052 27148681
a0002c0002 0/0 813 2 0 0 2 0 0 HOXA5_chr7_27136052_27148681 HOXA5 copy fasta chr7 27136052 27148681

acthapid grch38
chm13v2 		tlen total AFR AMR EAS EUR SAS regionname genename tseq chr start end
a0000c0003t0021 0/0 1609 1 0 0 1 0 0 HOXA5_chr7_27136052_27148681 HOXA5 copy fasta chr7 27136052 27148681
a0001c0001t0001 0/0 1669 122 11 15 75 5 16 HOXA5_chr7_27136052_27148681 HOXA5 copy fasta chr7 27136052 27148681
a0001c0001t0002 0/0 1668 106 5 28 56 4 13 HOXA5_chr7_27136052_27148681 HOXA5 copy fasta chr7 27136052 27148681
a0001c0001t0003 0/0 1669 49 7 16 26 0 0 HOXA5_chr7_27136052_27148681 HOXA5 copy fasta chr7 27136052 27148681
a0001c0001t0004 1/0 1670 26 16 1 2 0 6 HOXA5_chr7_27136052_27148681 HOXA5 copy fasta chr7 27136052 27148681
a0001c0001t0005 0/0 1668 23 15 2 3 2 1 HOXA5_chr7_27136052_27148681 HOXA5 copy fasta chr7 27136052 27148681
a0001c0001t0006 0/0 1670 14 3 5 4 0 2 HOXA5_chr7_27136052_27148681 HOXA5 copy fasta chr7 27136052 27148681
a0001c0001t0007 0/1 1671 11 5 1 3 0 1 HOXA5_chr7_27136052_27148681 HOXA5 copy fasta chr7 27136052 27148681
a0001c0001t0008 0/0 1671 7 5 0 1 0 1 HOXA5_chr7_27136052_27148681 HOXA5 copy fasta chr7 27136052 27148681
a0001c0001t0009 0/0 1667 7 2 0 4 1 0 HOXA5_chr7_27136052_27148681 HOXA5 copy fasta chr7 27136052 27148681
a0001c0001t0010 0/0 1668 5 0 0 5 0 0 HOXA5_chr7_27136052_27148681 HOXA5 copy fasta chr7 27136052 27148681
a0001c0001t0011 0/0 1669 4 2 2 0 0 0 HOXA5_chr7_27136052_27148681 HOXA5 copy fasta chr7 27136052 27148681
a0001c0001t0012 0/0 1667 4 4 0 0 0 0 HOXA5_chr7_27136052_27148681 HOXA5 copy fasta chr7 27136052 27148681
a0001c0001t0013 0/0 1668 4 0 2 0 0 2 HOXA5_chr7_27136052_27148681 HOXA5 copy fasta chr7 27136052 27148681
a0001c0001t0014 0/0 1669 3 3 0 0 0 0 HOXA5_chr7_27136052_27148681 HOXA5 copy fasta chr7 27136052 27148681
a0001c0001t0015 0/0 1669 3 3 0 0 0 0 HOXA5_chr7_27136052_27148681 HOXA5 copy fasta chr7 27136052 27148681
a0001c0001t0016 0/0 1670 2 1 1 0 0 0 HOXA5_chr7_27136052_27148681 HOXA5 copy fasta chr7 27136052 27148681
a0001c0001t0017 0/0 1670 1 1 0 0 0 0 HOXA5_chr7_27136052_27148681 HOXA5 copy fasta chr7 27136052 27148681
a0001c0001t0018 0/0 1669 1 0 1 0 0 0 HOXA5_chr7_27136052_27148681 HOXA5 copy fasta chr7 27136052 27148681
a0001c0001t0019 0/0 1656 1 1 0 0 0 0 HOXA5_chr7_27136052_27148681 HOXA5 copy fasta chr7 27136052 27148681
a0001c0001t0020 0/0 1670 1 1 0 0 0 0 HOXA5_chr7_27136052_27148681 HOXA5 copy fasta chr7 27136052 27148681
a0001c0004t0008 0/0 1671 1 1 0 0 0 0 HOXA5_chr7_27136052_27148681 HOXA5 copy fasta chr7 27136052 27148681
a0002c0002t0001 0/0 1669 2 0 0 2 0 0 HOXA5_chr7_27136052_27148681 HOXA5 copy fasta chr7 27136052 27148681

actghapid grch38/
chm13v2 		total AFR AMR EAS EUR SAS regionname genename chr start end
a0000c0003t0021g0031 0/0 1 0 0 1 0 0 HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
a0001c0001t0001g0001 0/0 100 11 12 60 3 14 HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
a0001c0001t0001g0008 0/0 10 0 1 8 0 1 HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
a0001c0001t0001g0018 0/0 4 0 0 4 0 0 HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
a0001c0001t0001g0023 0/0 3 0 2 0 1 0 HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
a0001c0001t0001g0026 0/0 2 0 0 1 1 0 HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
a0001c0001t0001g0036 0/0 1 0 0 1 0 0 HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
a0001c0001t0001g0037 0/0 1 0 0 1 0 0 HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
a0001c0001t0001g0040 0/0 1 0 0 0 0 1 HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
a0001c0001t0002g0002 0/0 70 5 25 26 3 11 HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
a0001c0001t0002g0004 0/0 33 0 3 28 1 1 HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
a0001c0001t0002g0035 0/0 1 0 0 1 0 0 HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
a0001c0001t0002g0039 0/0 1 0 0 0 0 1 HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
a0001c0001t0002g0046 0/0 1 0 0 1 0 0 HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
a0001c0001t0003g0003 0/0 42 3 14 25 0 0 HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
a0001c0001t0003g0013 0/0 5 4 1 0 0 0 HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
a0001c0001t0003g0033 0/0 1 0 0 1 0 0 HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
a0001c0001t0003g0048 0/0 1 0 1 0 0 0 HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
a0001c0001t0004g0006 1/0 13 7 1 2 0 2 HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
a0001c0001t0004g0009 0/0 9 9 0 0 0 0 HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
a0001c0001t0004g0024 0/0 3 0 0 0 0 3 HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
a0001c0001t0004g0051 0/0 1 0 0 0 0 1 HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
a0001c0001t0005g0005 0/0 18 12 1 2 2 1 HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
a0001c0001t0005g0021 0/0 3 3 0 0 0 0 HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
a0001c0001t0005g0029 0/0 2 0 1 1 0 0 HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
a0001c0001t0006g0007 0/0 10 3 2 3 0 2 HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
a0001c0001t0006g0041 0/0 1 0 1 0 0 0 HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
a0001c0001t0006g0045 0/0 1 0 1 0 0 0 HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
a0001c0001t0006g0047 0/0 1 0 1 0 0 0 HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
a0001c0001t0006g0049 0/0 1 0 0 1 0 0 HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
a0001c0001t0007g0017 0/0 4 1 0 2 0 1 HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
a0001c0001t0007g0019 0/0 4 4 0 0 0 0 HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
a0001c0001t0007g0030 0/1 2 0 1 0 0 0 HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
a0001c0001t0007g0044 0/0 1 0 0 1 0 0 HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
a0001c0001t0008g0012 0/0 5 4 0 0 0 1 HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
a0001c0001t0008g0027 0/0 2 1 0 1 0 0 HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
a0001c0001t0009g0011 0/0 5 2 0 3 0 0 HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
a0001c0001t0009g0028 0/0 2 0 0 1 1 0 HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
a0001c0001t0010g0010 0/0 5 0 0 5 0 0 HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
a0001c0001t0011g0014 0/0 4 2 2 0 0 0 HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
a0001c0001t0012g0015 0/0 4 4 0 0 0 0 HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
a0001c0001t0013g0016 0/0 4 0 2 0 0 2 HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
a0001c0001t0014g0022 0/0 3 3 0 0 0 0 HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
a0001c0001t0015g0020 0/0 3 3 0 0 0 0 HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
a0001c0001t0016g0032 0/0 1 0 1 0 0 0 HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
a0001c0001t0016g0034 0/0 1 1 0 0 0 0 HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
a0001c0001t0017g0038 0/0 1 1 0 0 0 0 HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
a0001c0001t0018g0042 0/0 1 0 1 0 0 0 HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
a0001c0001t0019g0043 0/0 1 1 0 0 0 0 HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
a0001c0001t0020g0050 0/0 1 1 0 0 0 0 HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
a0001c0004t0008g0052 0/0 1 1 0 0 0 0 HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
a0002c0002t0001g0025 0/0 2 0 0 2 0 0 HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681

sampleid ID
haplotypeid
 ahapid chapid thapid ghapid gpopname popname regionname genename chr start end
HG00099 hp1 a0001 c0001 t0001 g0001 EUR GBR HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
HG00099 hp2 a0001 c0001 t0002 g0002 EUR GBR HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
HG00140 hp1 a0001 c0001 t0005 g0005 EUR GBR HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
HG00140 hp2 a0001 c0001 t0001 g0001 EUR GBR HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
HG00280 hp1 a0001 c0001 t0002 g0002 EUR FIN HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
HG00280 hp2 a0001 c0001 t0001 g0026 EUR FIN HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
HG00408 hp1 a0001 c0001 t0001 g0001 EAS CHS HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
HG00408 hp2 a0001 c0001 t0010 g0010 EAS CHS HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
HG00423 hp1 a0001 c0001 t0002 g0004 EAS CHS HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
HG00423 hp2 a0001 c0001 t0010 g0010 EAS CHS HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
HG00438 hp1 a0001 c0001 t0002 g0002 EAS CHS HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
HG00438 hp2 a0001 c0001 t0001 g0008 EAS CHS HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
HG00544 hp1 a0001 c0001 t0002 g0004 EAS CHS HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
HG00544 hp2 a0001 c0001 t0002 g0004 EAS CHS HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
HG00558 hp1 a0001 c0001 t0003 g0003 EAS CHS HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
HG00558 hp2 a0001 c0001 t0002 g0004 EAS CHS HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
HG00597 hp1 a0001 c0001 t0002 g0004 EAS CHS HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
HG00597 hp2 a0001 c0001 t0003 g0003 EAS CHS HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
HG00609 hp1 a0001 c0001 t0001 g0001 EAS CHS HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
HG00609 hp2 a0001 c0001 t0001 g0001 EAS CHS HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
HG00621 hp1 a0001 c0001 t0006 g0007 EAS CHS HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
HG00621 hp2 a0001 c0001 t0001 g0008 EAS CHS HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
HG00642 hp1 a0001 c0001 t0002 g0002 AMR PUR HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
HG00642 hp2 a0001 c0001 t0001 g0023 AMR PUR HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
HG00673 hp1 a0001 c0001 t0001 g0008 EAS CHS HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
HG00673 hp2 a0001 c0001 t0002 g0002 EAS CHS HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
HG00733 hp1 a0001 c0001 t0002 g0002 AMR PUR HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
HG00733 hp2 a0001 c0001 t0001 g0001 AMR PUR HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
HG00735 hp1 a0001 c0001 t0013 g0016 AMR PUR HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
HG00735 hp2 a0001 c0001 t0001 g0001 AMR PUR HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
HG00738 hp1 a0001 c0001 t0004 g0006 AMR PUR HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
HG00738 hp2 a0001 c0001 t0002 g0004 AMR PUR HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
HG00741 hp1 a0001 c0001 t0003 g0003 AMR PUR HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
HG00741 hp2 a0001 c0001 t0002 g0002 AMR PUR HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
HG01069 hp1 a0001 c0001 t0001 g0001 AMR PUR HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
HG01069 hp2 a0001 c0001 t0011 g0014 AMR PUR HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
HG01070 hp1 a0001 c0001 t0002 g0002 AMR PUR HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
HG01070 hp2 a0001 c0001 t0001 g0023 AMR PUR HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
HG01071 hp1 a0001 c0001 t0002 g0002 AMR PUR HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
HG01071 hp2 a0001 c0001 t0011 g0014 AMR PUR HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
HG01081 hp1 a0001 c0001 t0001 g0001 AMR PUR HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
HG01081 hp2 a0001 c0001 t0016 g0032 AMR PUR HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
HG01099 hp1 a0001 c0001 t0003 g0003 AMR PUR HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
HG01099 hp2 a0001 c0001 t0002 g0002 AMR PUR HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
HG01106 hp1 a0001 c0001 t0006 g0041 AMR PUR HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
HG01106 hp2 a0001 c0001 t0002 g0002 AMR PUR HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
HG01109 hp1 a0001 c0001 t0001 g0001 AMR PUR HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
HG01109 hp2 a0001 c0001 t0001 g0001 AMR PUR HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
HG01167 hp1 a0001 c0001 t0002 g0002 AMR PUR HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
HG01167 hp2 a0001 c0001 t0013 g0016 AMR PUR HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
HG01169 hp1 a0001 c0001 t0002 g0002 AMR PUR HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
HG01169 hp2 a0001 c0001 t0002 g0002 AMR PUR HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
HG01175 hp1 a0001 c0001 t0001 g0001 AMR PUR HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
HG01175 hp2 a0001 c0001 t0003 g0003 AMR PUR HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
HG01192 hp1 a0001 c0001 t0002 g0002 AMR PUR HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
HG01192 hp2 a0001 c0001 t0006 g0045 AMR PUR HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
HG01255 hp1 a0001 c0001 t0003 g0003 AMR CLM HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
HG01255 hp2 a0001 c0001 t0003 g0013 AMR CLM HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
HG01256 hp1 a0001 c0001 t0003 g0003 AMR CLM HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
HG01256 hp2 a0001 c0001 t0001 g0001 AMR CLM HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
HG01258 hp1 a0001 c0001 t0001 g0001 AMR CLM HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
HG01258 hp2 a0001 c0001 t0001 g0001 AMR CLM HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
HG01261 hp1 a0001 c0001 t0005 g0005 AMR CLM HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
HG01261 hp2 a0001 c0001 t0003 g0048 AMR CLM HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
HG01346 hp1 a0001 c0001 t0003 g0003 AMR CLM HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
HG01346 hp2 a0001 c0001 t0001 g0008 AMR CLM HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
HG01358 hp1 a0001 c0001 t0002 g0004 AMR CLM HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
HG01358 hp2 a0001 c0001 t0002 g0004 AMR CLM HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
HG01361 hp1 a0001 c0001 t0006 g0007 AMR CLM HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
HG01361 hp2 a0001 c0001 t0001 g0001 AMR CLM HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
HG01496 hp1 a0001 c0001 t0002 g0002 AMR CLM HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
HG01496 hp2 a0001 c0001 t0001 g0001 AMR CLM HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
HG01516 hp1 a0001 c0001 t0001 g0023 EUR IBS HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
HG01516 hp2 a0001 c0001 t0001 g0001 EUR IBS HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
HG01884 hp1 a0001 c0001 t0004 g0006 AFR ACB HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
HG01884 hp2 a0001 c0001 t0008 g0012 AFR ACB HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
HG01928 hp1 a0001 c0001 t0003 g0003 AMR PEL HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
HG01928 hp2 a0001 c0001 t0002 g0002 AMR PEL HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
HG01934 hp1 a0001 c0001 t0003 g0003 AMR PEL HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
HG01934 hp2 a0001 c0001 t0018 g0042 AMR PEL HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
HG01952 hp1 a0001 c0001 t0006 g0047 AMR PEL HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
HG01952 hp2 a0001 c0001 t0003 g0003 AMR PEL HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
HG01975 hp1 a0001 c0001 t0003 g0003 AMR PEL HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
HG01975 hp2 a0001 c0001 t0002 g0002 AMR PEL HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
HG01978 hp1 a0001 c0001 t0006 g0007 AMR PEL HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
HG01978 hp2 a0001 c0001 t0002 g0002 AMR PEL HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
HG01981 hp1 a0001 c0001 t0002 g0002 AMR PEL HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
HG01981 hp2 a0001 c0001 t0003 g0003 AMR PEL HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
HG01993 hp1 a0001 c0001 t0002 g0002 AMR PEL HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
HG01993 hp2 a0001 c0001 t0002 g0002 AMR PEL HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
HG02004 hp1 a0001 c0001 t0002 g0002 AMR PEL HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
HG02004 hp2 a0001 c0001 t0003 g0003 AMR PEL HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
HG02015 hp1 a0001 c0001 t0002 g0004 EAS KHV HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
HG02015 hp2 a0001 c0001 t0001 g0001 EAS KHV HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
HG02027 hp1 a0001 c0001 t0002 g0004 EAS KHV HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
HG02027 hp2 a0001 c0001 t0001 g0001 EAS KHV HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
HG02040 hp1 a0000 c0003 t0021 g0031 EAS KHV HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
HG02040 hp2 a0001 c0001 t0001 g0026 EAS KHV HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
HG02056 hp1 a0001 c0001 t0003 g0003 EAS KHV HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
HG02056 hp2 a0001 c0001 t0002 g0004 EAS KHV HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
HG02071 hp1 a0001 c0001 t0003 g0003 EAS KHV HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
HG02071 hp2 a0001 c0001 t0001 g0001 EAS KHV HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
HG02074 hp1 a0001 c0001 t0002 g0004 EAS KHV HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
HG02074 hp2 a0001 c0001 t0001 g0001 EAS KHV HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
HG02080 hp1 a0001 c0001 t0003 g0003 EAS KHV HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
HG02080 hp2 a0001 c0001 t0001 g0001 EAS KHV HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
HG02083 hp1 a0001 c0001 t0002 g0004 EAS KHV HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
HG02083 hp2 a0001 c0001 t0003 g0003 EAS KHV HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
HG02132 hp1 a0001 c0001 t0002 g0002 EAS KHV HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
HG02132 hp2 a0001 c0001 t0001 g0001 EAS KHV HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
HG02135 hp1 a0001 c0001 t0002 g0004 EAS KHV HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
HG02135 hp2 a0001 c0001 t0002 g0004 EAS KHV HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
HG02145 hp1 a0001 c0001 t0001 g0001 AFR ACB HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
HG02145 hp2 a0001 c0001 t0015 g0020 AFR ACB HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
HG02148 hp1 a0001 c0001 t0002 g0002 AMR PEL HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
HG02148 hp2 a0001 c0001 t0003 g0003 AMR PEL HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
HG02155 hp1 a0001 c0001 t0003 g0003 EAS CDX HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
HG02155 hp2 a0001 c0001 t0002 g0004 EAS CDX HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
HG02165 hp1 a0001 c0001 t0002 g0004 EAS CDX HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
HG02165 hp2 a0001 c0001 t0002 g0002 EAS CDX HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
HG02257 hp1 a0001 c0001 t0003 g0013 AFR ACB HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
HG02257 hp2 a0001 c0001 t0004 g0006 AFR ACB HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
HG02258 hp1 a0001 c0001 t0011 g0014 AFR ACB HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
HG02258 hp2 a0001 c0001 t0004 g0009 AFR ACB HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
HG02273 hp1 a0001 c0001 t0002 g0002 AMR PEL HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
HG02273 hp2 a0001 c0001 t0002 g0002 AMR PEL HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
HG02280 hp1 a0001 c0001 t0012 g0015 AFR ACB HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
HG02280 hp2 a0001 c0001 t0007 g0019 AFR ACB HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
HG02293 hp1 a0001 c0001 t0003 g0003 AMR PEL HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
HG02293 hp2 a0001 c0001 t0007 g0030 AMR PEL HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
HG02300 hp1 a0001 c0001 t0002 g0002 AMR PEL HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
HG02300 hp2 a0001 c0001 t0005 g0029 AMR PEL HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
HG02523 hp1 a0001 c0001 t0003 g0003 EAS KHV HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
HG02523 hp2 a0001 c0001 t0001 g0001 EAS KHV HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
HG02572 hp1 a0001 c0001 t0008 g0012 AFR GWD HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
HG02572 hp2 a0001 c0001 t0007 g0019 AFR GWD HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
HG02602 hp1 a0001 c0001 t0002 g0002 SAS PJL HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
HG02602 hp2 a0001 c0001 t0001 g0001 SAS PJL HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
HG02615 hp1 a0001 c0001 t0005 g0005 AFR GWD HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
HG02615 hp2 a0001 c0001 t0019 g0043 AFR GWD HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
HG02630 hp1 a0001 c0001 t0012 g0015 AFR GWD HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
HG02630 hp2 a0001 c0001 t0004 g0006 AFR GWD HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
HG02717 hp1 a0001 c0001 t0002 g0002 AFR GWD HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
HG02717 hp2 a0001 c0001 t0001 g0001 AFR GWD HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
HG02723 hp1 a0001 c0001 t0006 g0007 AFR GWD HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
HG02723 hp2 a0001 c0001 t0015 g0020 AFR GWD HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
HG02735 hp1 a0001 c0001 t0005 g0005 SAS PJL HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
HG02735 hp2 a0001 c0001 t0001 g0001 SAS PJL HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
HG02738 hp1 a0001 c0001 t0001 g0001 SAS PJL HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
HG02738 hp2 a0001 c0001 t0001 g0001 SAS PJL HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
HG02809 hp1 a0001 c0001 t0002 g0002 AFR GWD HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
HG02809 hp2 a0001 c0001 t0005 g0005 AFR GWD HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
HG02818 hp1 a0001 c0001 t0006 g0007 AFR GWD HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
HG02818 hp2 a0001 c0001 t0004 g0009 AFR GWD HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
HG02886 hp1 a0001 c0001 t0004 g0009 AFR GWD HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
HG02886 hp2 a0001 c0001 t0009 g0011 AFR GWD HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
HG02895 hp1 a0001 c0001 t0003 g0003 AFR GWD HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
HG02895 hp2 a0001 c0001 t0004 g0009 AFR GWD HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
HG02896 hp1 a0001 c0001 t0017 g0038 AFR GWD HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
HG02896 hp2 a0001 c0001 t0005 g0005 AFR GWD HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
HG02897 hp1 a0001 c0001 t0004 g0009 AFR GWD HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
HG02897 hp2 a0001 c0001 t0005 g0005 AFR GWD HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
HG02922 hp1 a0001 c0001 t0014 g0022 AFR ESN HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
HG02922 hp2 a0001 c0001 t0005 g0021 AFR ESN HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
HG02965 hp1 a0001 c0001 t0011 g0014 AFR ESN HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
HG02965 hp2 a0001 c0001 t0005 g0005 AFR ESN HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
HG02970 hp1 a0001 c0001 t0008 g0012 AFR ESN HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
HG02970 hp2 a0001 c0001 t0004 g0009 AFR ESN HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
HG02976 hp1 a0001 c0001 t0001 g0001 AFR ESN HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
HG02976 hp2 a0001 c0001 t0014 g0022 AFR ESN HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
HG03017 hp1 a0001 c0001 t0004 g0024 SAS PJL HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
HG03017 hp2 a0001 c0001 t0002 g0002 SAS PJL HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
HG03041 hp1 a0001 c0001 t0001 g0001 AFR GWD HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
HG03041 hp2 a0001 c0001 t0003 g0013 AFR GWD HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
HG03098 hp1 a0001 c0001 t0001 g0001 AFR MSL HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
HG03098 hp2 a0001 c0001 t0005 g0021 AFR MSL HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
HG03130 hp1 a0001 c0001 t0014 g0022 AFR ESN HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
HG03130 hp2 a0001 c0001 t0003 g0013 AFR ESN HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
HG03139 hp1 a0001 c0001 t0003 g0013 AFR ESN HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
HG03139 hp2 a0001 c0001 t0004 g0006 AFR ESN HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
HG03195 hp1 a0001 c0001 t0001 g0001 AFR ESN HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
HG03195 hp2 a0001 c0001 t0020 g0050 AFR ESN HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
HG03209 hp1 a0001 c0001 t0008 g0012 AFR MSL HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
HG03209 hp2 a0001 c0004 t0008 g0052 AFR MSL HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
HG03225 hp1 a0001 c0001 t0006 g0007 AFR MSL HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
HG03225 hp2 a0001 c0001 t0012 g0015 AFR MSL HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
HG03239 hp1 a0001 c0001 t0002 g0002 SAS PJL HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
HG03239 hp2 a0001 c0001 t0002 g0002 SAS PJL HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
HG03453 hp1 a0001 c0001 t0001 g0001 AFR MSL HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
HG03453 hp2 a0001 c0001 t0004 g0009 AFR MSL HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
HG03486 hp1 a0001 c0001 t0009 g0011 AFR MSL HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
HG03486 hp2 a0001 c0001 t0005 g0005 AFR MSL HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
HG03490 hp1 a0001 c0001 t0001 g0008 SAS PJL HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
HG03490 hp2 a0001 c0001 t0002 g0002 SAS PJL HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
HG03491 hp1 a0001 c0001 t0013 g0016 SAS PJL HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
HG03491 hp2 a0001 c0001 t0004 g0051 SAS PJL HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
HG03492 hp1 a0001 c0001 t0002 g0002 SAS PJL HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
HG03492 hp2 a0001 c0001 t0013 g0016 SAS PJL HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
HG03516 hp1 a0001 c0001 t0005 g0005 AFR ESN HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
HG03516 hp2 a0001 c0001 t0005 g0005 AFR ESN HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
HG03540 hp1 a0001 c0001 t0004 g0006 AFR GWD HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
HG03540 hp2 a0001 c0001 t0005 g0005 AFR GWD HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
HG03654 hp1 a0001 c0001 t0001 g0001 SAS PJL HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
HG03654 hp2 a0001 c0001 t0002 g0002 SAS PJL HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
HG03669 hp1 a0001 c0001 t0002 g0004 SAS PJL HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
HG03669 hp2 a0001 c0001 t0001 g0001 SAS PJL HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
HG03688 hp1 a0001 c0001 t0001 g0001 SAS STU HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
HG03688 hp2 a0001 c0001 t0004 g0006 SAS STU HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
HG03704 hp1 a0001 c0001 t0001 g0001 SAS PJL HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
HG03704 hp2 a0001 c0001 t0008 g0012 SAS PJL HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
HG03710 hp1 a0001 c0001 t0002 g0002 SAS PJL HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
HG03710 hp2 a0001 c0001 t0002 g0002 SAS PJL HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
HG03927 hp1 a0001 c0001 t0004 g0024 SAS BEB HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
HG03927 hp2 a0001 c0001 t0001 g0001 SAS BEB HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
HG03942 hp1 a0001 c0001 t0007 g0017 SAS BEB HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
HG03942 hp2 a0001 c0001 t0001 g0001 SAS BEB HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
HG04115 hp1 a0001 c0001 t0001 g0001 SAS STU HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
HG04115 hp2 a0001 c0001 t0001 g0040 SAS STU HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
HG04184 hp1 a0001 c0001 t0004 g0024 SAS BEB HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
HG04184 hp2 a0001 c0001 t0001 g0001 SAS BEB HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
HG04199 hp1 a0001 c0001 t0001 g0001 SAS STU HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
HG04199 hp2 a0001 c0001 t0004 g0006 SAS STU HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
HG04204 hp1 a0001 c0001 t0002 g0002 SAS STU HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
HG04204 hp2 a0001 c0001 t0006 g0007 SAS STU HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
HG04228 hp1 a0001 c0001 t0002 g0002 SAS STU HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
HG04228 hp2 a0001 c0001 t0006 g0007 SAS STU HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
NA18522 hp1 a0001 c0001 t0005 g0021 AFR YRI HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
NA18522 hp2 a0001 c0001 t0004 g0006 AFR YRI HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
NA18747 hp1 a0001 c0001 t0002 g0046 EAS CHB HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
NA18747 hp2 a0001 c0001 t0001 g0001 EAS CHB HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
NA18906 hp1 a0001 c0001 t0007 g0017 AFR YRI HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
NA18906 hp2 a0001 c0001 t0007 g0019 AFR YRI HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
NA18939 hp1 a0001 c0001 t0001 g0001 EAS JPT HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
NA18939 hp2 a0001 c0001 t0001 g0001 EAS JPT HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
NA18940 hp1 a0001 c0001 t0001 g0001 EAS JPT HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
NA18940 hp2 a0001 c0001 t0002 g0004 EAS JPT HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
NA18942 hp1 a0001 c0001 t0001 g0001 EAS JPT HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
NA18942 hp2 a0001 c0001 t0005 g0005 EAS JPT HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
NA18943 hp1 a0001 c0001 t0010 g0010 EAS JPT HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
NA18943 hp2 a0001 c0001 t0002 g0002 EAS JPT HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
NA18944 hp1 a0001 c0001 t0001 g0001 EAS JPT HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
NA18944 hp2 a0001 c0001 t0001 g0001 EAS JPT HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
NA18945 hp1 a0001 c0001 t0002 g0004 EAS JPT HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
NA18945 hp2 a0001 c0001 t0002 g0004 EAS JPT HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
NA18948 hp1 a0001 c0001 t0002 g0002 EAS JPT HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
NA18948 hp2 a0001 c0001 t0002 g0002 EAS JPT HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
NA18950 hp1 a0001 c0001 t0001 g0001 EAS JPT HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
NA18950 hp2 a0001 c0001 t0003 g0003 EAS JPT HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
NA18951 hp1 a0001 c0001 t0001 g0001 EAS JPT HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
NA18951 hp2 a0001 c0001 t0003 g0003 EAS JPT HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
NA18952 hp1 a0001 c0001 t0001 g0001 EAS JPT HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
NA18952 hp2 a0001 c0001 t0001 g0001 EAS JPT HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
NA18953 hp1 a0001 c0001 t0001 g0036 EAS JPT HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
NA18953 hp2 a0001 c0001 t0002 g0002 EAS JPT HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
NA18954 hp1 a0001 c0001 t0001 g0001 EAS JPT HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
NA18954 hp2 a0001 c0001 t0001 g0008 EAS JPT HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
NA18957 hp1 a0001 c0001 t0001 g0001 EAS JPT HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
NA18957 hp2 a0001 c0001 t0003 g0003 EAS JPT HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
NA18960 hp1 a0001 c0001 t0002 g0004 EAS JPT HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
NA18960 hp2 a0001 c0001 t0003 g0003 EAS JPT HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
NA18962 hp1 a0001 c0001 t0001 g0001 EAS JPT HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
NA18962 hp2 a0001 c0001 t0009 g0011 EAS JPT HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
NA18963 hp1 a0001 c0001 t0001 g0008 EAS JPT HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
NA18963 hp2 a0001 c0001 t0001 g0008 EAS JPT HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
NA18964 hp1 a0001 c0001 t0002 g0004 EAS JPT HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
NA18964 hp2 a0001 c0001 t0001 g0001 EAS JPT HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
NA18965 hp1 a0001 c0001 t0002 g0035 EAS JPT HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
NA18965 hp2 a0001 c0001 t0001 g0001 EAS JPT HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
NA18966 hp1 a0001 c0001 t0003 g0003 EAS JPT HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
NA18966 hp2 a0001 c0001 t0001 g0001 EAS JPT HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
NA18967 hp1 a0001 c0001 t0002 g0002 EAS JPT HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
NA18967 hp2 a0001 c0001 t0002 g0002 EAS JPT HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
NA18968 hp1 a0001 c0001 t0002 g0004 EAS JPT HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
NA18968 hp2 a0001 c0001 t0002 g0002 EAS JPT HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
NA18969 hp1 a0001 c0001 t0002 g0002 EAS JPT HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
NA18969 hp2 a0001 c0001 t0001 g0001 EAS JPT HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
NA18970 hp1 a0001 c0001 t0001 g0001 EAS JPT HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
NA18970 hp2 a0001 c0001 t0005 g0005 EAS JPT HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
NA18971 hp1 a0001 c0001 t0001 g0001 EAS JPT HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
NA18971 hp2 a0001 c0001 t0003 g0003 EAS JPT HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
NA18973 hp1 a0001 c0001 t0004 g0006 EAS JPT HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
NA18973 hp2 a0001 c0001 t0001 g0001 EAS JPT HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
NA18975 hp1 a0001 c0001 t0001 g0001 EAS JPT HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
NA18975 hp2 a0001 c0001 t0002 g0002 EAS JPT HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
NA18977 hp1 a0001 c0001 t0003 g0003 EAS JPT HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
NA18977 hp2 a0001 c0001 t0001 g0001 EAS JPT HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
NA18979 hp1 a0001 c0001 t0007 g0017 EAS JPT HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
NA18979 hp2 a0002 c0002 t0001 g0025 EAS JPT HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
NA18980 hp1 a0001 c0001 t0003 g0003 EAS JPT HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
NA18980 hp2 a0001 c0001 t0001 g0001 EAS JPT HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
NA18982 hp1 a0001 c0001 t0002 g0004 EAS JPT HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
NA18982 hp2 a0001 c0001 t0001 g0001 EAS JPT HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
NA18984 hp1 a0002 c0002 t0001 g0025 EAS JPT HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
NA18984 hp2 a0001 c0001 t0001 g0008 EAS JPT HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
NA18987 hp1 a0001 c0001 t0002 g0002 EAS JPT HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
NA18987 hp2 a0001 c0001 t0002 g0004 EAS JPT HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
NA18988 hp1 a0001 c0001 t0001 g0001 EAS JPT HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
NA18988 hp2 a0001 c0001 t0001 g0001 EAS JPT HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
NA18990 hp1 a0001 c0001 t0001 g0001 EAS JPT HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
NA18990 hp2 a0001 c0001 t0002 g0002 EAS JPT HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
NA18992 hp1 a0001 c0001 t0009 g0011 EAS JPT HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
NA18992 hp2 a0001 c0001 t0003 g0003 EAS JPT HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
NA18993 hp1 a0001 c0001 t0001 g0001 EAS JPT HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
NA18993 hp2 a0001 c0001 t0002 g0004 EAS JPT HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
NA18995 hp1 a0001 c0001 t0001 g0001 EAS JPT HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
NA18995 hp2 a0001 c0001 t0001 g0001 EAS JPT HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
NA18997 hp1 a0001 c0001 t0006 g0049 EAS JPT HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
NA18997 hp2 a0001 c0001 t0008 g0027 EAS JPT HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
NA18998 hp1 a0001 c0001 t0002 g0002 EAS JPT HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
NA18998 hp2 a0001 c0001 t0002 g0002 EAS JPT HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
NA18999 hp1 a0001 c0001 t0003 g0003 EAS JPT HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
NA18999 hp2 a0001 c0001 t0001 g0001 EAS JPT HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
NA19000 hp1 a0001 c0001 t0005 g0029 EAS JPT HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
NA19000 hp2 a0001 c0001 t0001 g0001 EAS JPT HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
NA19003 hp1 a0001 c0001 t0001 g0008 EAS JPT HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
NA19003 hp2 a0001 c0001 t0001 g0001 EAS JPT HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
NA19005 hp1 a0001 c0001 t0001 g0018 EAS JPT HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
NA19005 hp2 a0001 c0001 t0001 g0001 EAS JPT HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
NA19007 hp1 a0001 c0001 t0003 g0003 EAS JPT HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
NA19007 hp2 a0001 c0001 t0001 g0001 EAS JPT HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
NA19009 hp1 a0001 c0001 t0003 g0003 EAS JPT HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
NA19009 hp2 a0001 c0001 t0002 g0004 EAS JPT HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
NA19010 hp1 a0001 c0001 t0003 g0003 EAS JPT HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
NA19010 hp2 a0001 c0001 t0006 g0007 EAS JPT HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
NA19011 hp1 a0001 c0001 t0002 g0002 EAS JPT HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
NA19011 hp2 a0001 c0001 t0001 g0001 EAS JPT HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
NA19012 hp1 a0001 c0001 t0001 g0001 EAS JPT HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
NA19012 hp2 a0001 c0001 t0007 g0044 EAS JPT HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
NA19030 hp1 a0001 c0001 t0001 g0001 AFR LWK HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
NA19030 hp2 a0001 c0001 t0005 g0005 AFR LWK HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
NA19043 hp1 a0001 c0001 t0002 g0002 AFR LWK HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
NA19043 hp2 a0001 c0001 t0005 g0005 AFR LWK HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
NA19054 hp1 a0001 c0001 t0001 g0037 EAS JPT HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
NA19054 hp2 a0001 c0001 t0004 g0006 EAS JPT HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
NA19055 hp1 a0001 c0001 t0001 g0001 EAS JPT HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
NA19055 hp2 a0001 c0001 t0002 g0002 EAS JPT HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
NA19057 hp1 a0001 c0001 t0002 g0002 EAS JPT HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
NA19057 hp2 a0001 c0001 t0002 g0004 EAS JPT HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
NA19058 hp1 a0001 c0001 t0003 g0033 EAS JPT HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
NA19058 hp2 a0001 c0001 t0002 g0004 EAS JPT HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
NA19060 hp1 a0001 c0001 t0003 g0003 EAS JPT HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
NA19060 hp2 a0001 c0001 t0002 g0002 EAS JPT HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
NA19062 hp1 a0001 c0001 t0006 g0007 EAS JPT HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
NA19062 hp2 a0001 c0001 t0001 g0001 EAS JPT HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
NA19064 hp1 a0001 c0001 t0002 g0002 EAS JPT HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
NA19064 hp2 a0001 c0001 t0010 g0010 EAS JPT HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
NA19065 hp1 a0001 c0001 t0001 g0001 EAS JPT HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
NA19065 hp2 a0001 c0001 t0002 g0004 EAS JPT HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
NA19066 hp1 a0001 c0001 t0003 g0003 EAS JPT HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
NA19066 hp2 a0001 c0001 t0002 g0002 EAS JPT HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
NA19067 hp1 a0001 c0001 t0003 g0003 EAS JPT HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
NA19067 hp2 a0001 c0001 t0002 g0004 EAS JPT HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
NA19068 hp1 a0001 c0001 t0001 g0001 EAS JPT HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
NA19068 hp2 a0001 c0001 t0009 g0011 EAS JPT HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
NA19070 hp1 a0001 c0001 t0001 g0001 EAS JPT HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
NA19070 hp2 a0001 c0001 t0001 g0001 EAS JPT HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
NA19072 hp1 a0001 c0001 t0001 g0001 EAS JPT HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
NA19072 hp2 a0001 c0001 t0002 g0002 EAS JPT HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
NA19079 hp1 a0001 c0001 t0009 g0028 EAS JPT HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
NA19079 hp2 a0001 c0001 t0001 g0018 EAS JPT HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
NA19080 hp1 a0001 c0001 t0001 g0001 EAS JPT HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
NA19080 hp2 a0001 c0001 t0001 g0001 EAS JPT HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
NA19084 hp1 a0001 c0001 t0002 g0002 EAS JPT HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
NA19084 hp2 a0001 c0001 t0002 g0002 EAS JPT HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
NA19088 hp1 a0001 c0001 t0001 g0018 EAS JPT HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
NA19088 hp2 a0001 c0001 t0001 g0001 EAS JPT HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
NA19089 hp1 a0001 c0001 t0001 g0018 EAS JPT HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
NA19089 hp2 a0001 c0001 t0007 g0017 EAS JPT HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
NA19090 hp1 a0001 c0001 t0001 g0001 EAS JPT HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
NA19090 hp2 a0001 c0001 t0003 g0003 EAS JPT HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
NA19091 hp1 a0001 c0001 t0010 g0010 EAS JPT HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
NA19091 hp2 a0001 c0001 t0001 g0001 EAS JPT HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
NA19240 hp1 a0001 c0001 t0012 g0015 AFR YRI HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
NA19240 hp2 a0001 c0001 t0004 g0009 AFR YRI HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
NA20129 hp1 a0001 c0001 t0015 g0020 AFR ASW HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
NA20129 hp2 a0001 c0001 t0008 g0027 AFR ASW HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
NA20752 hp1 a0001 c0001 t0005 g0005 EUR TSI HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
NA20752 hp2 a0001 c0001 t0002 g0004 EUR TSI HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
NA20805 hp1 a0001 c0001 t0009 g0028 EUR TSI HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
NA20805 hp2 a0001 c0001 t0002 g0002 EUR TSI HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
NA20905 hp1 a0001 c0001 t0001 g0001 SAS GIH HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
NA20905 hp2 a0001 c0001 t0002 g0039 SAS GIH HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
HG01123 hp1 a0001 c0001 t0002 g0002 AMR CLM HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
HG01123 hp2 a0001 c0001 t0002 g0002 AMR CLM HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
HG02109 hp1 a0001 c0001 t0004 g0006 AFR ACB HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
HG02109 hp2 a0001 c0001 t0001 g0001 AFR ACB HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
HG02486 hp1 a0001 c0001 t0005 g0005 AFR ACB HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
HG02486 hp2 a0001 c0001 t0007 g0019 AFR ACB HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
HG02559 hp1 a0001 c0001 t0004 g0009 AFR ACB HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
HG02559 hp2 a0001 c0001 t0016 g0034 AFR ACB HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
HG06807 hp1 a0001 c0001 t0001 g0001 AFR USA HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
HG06807 hp2 a0001 c0001 t0001 g0001 AFR USA HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
NA20300 hp1 a0001 c0001 t0002 g0002 AFR USA HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
NA20300 hp2 a0001 c0001 t0003 g0003 AFR USA HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
NA21309 hp1 a0001 c0001 t0003 g0003 AFR LWK HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
NA21309 hp2 a0001 c0001 t0002 g0002 AFR LWK HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
homoSapiens_chm13v2 hp1 a0001 c0001 t0007 g0030 REF REF HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681
homoSapiens_grch38 hp1 a0001 c0001 t0004 g0006 REF REF HOXA5_chr7_27136052_27148681 HOXA5 chr7 27136052 27148681

chr:pos ref alt #
# of ahapid:amino-acid(protein) level
 ahapids #
# of haplotypeids
 haplotypeids annotation impact hgvs_c hgvs_p genename geneid featuretype featureid transcript_biotype rank cdna
cdna pos length
 cds
cds pos length
 aa
aa pos length
 distance status chr pos
chr7:27141807 CTGCTCAG
others(52): Show 
CTGCTCAGTACTTTAAACGCTCAGATACTCAGGGACGGAAGGCCCCTCCT
GCCGCGGCCA
 C
C
 1 a0000
a0000
 1 HG02040.hp1
HG02040.hp1
 frameshift_variant&stop_lost HIGH c.782_*27delTGGCCGCG
others(51): Show 
c.782_*27delTGGCCGCGGCAGGAGGGGCCTTCCGTCCCTGAGTATCT
GAGCGTTTAAAGTACTGAGCA
 p.Met261fs
p.Met261fs
 HOXA5 ENSG00000106004.5 transcript ENST00000222726.4 protein_coding 2/2 914/1670 782/813 261/270 chr7 27141807
chr7:27143271 C
C
 T
T
 1 a0002
a0002
 2 NA18979.hp2
NA18984.hp1
NA18979.hp2
NA18984.hp1
 missense_variant MODERATE c.337G>A
c.337G>A
 p.Asp113Asn
p.Asp113Asn
 HOXA5 ENSG00000106004.5 transcript ENST00000222726.4 protein_coding 1/2 411/1670 337/813 113/270 chr7 27143271

chr:pos ref alt #
# of chapid
 chapids #
# of haplotypeids
 haplotypeids annotation impact hgvs_c hgvs_p genename geneid featuretype featureid transcript_biotype rank cdna
cdna pos length
 cds
cds pos length
 aa
aa pos length
 distance status chr pos
chr7:27143380 G
G
 A
A
 1 a0001c0004
a0001c0004
 1 HG03209.hp2
HG03209.hp2
 synonymous_variant LOW c.228C>T
c.228C>T
 p.Ser76Ser
p.Ser76Ser
 HOXA5 ENSG00000106004.5 transcript ENST00000222726.4 protein_coding 1/2 302/1670 228/813 76/270 chr7 27143380

chr:pos ref alt #
# of thapid:transcript level
 thapids #
# of haplotypeids
 haplotypeids annotation impact hgvs_c hgvs_p genename geneid featuretype featureid transcript_biotype rank cdna
cdna pos length
 cds
cds pos length
 aa
aa pos length
 distance status chr pos
chr7:27141113 C
C
 CA
CA
 1 a0001c0001t0007
a0001c0001t0007
 11 HG02280.hp2
HG02293.hp2
HG02486.hp2
others(8): Show 
HG02280.hp2
HG02293.hp2
HG02486.hp2
HG02572.hp2
HG03942.hp1
NA18906.hp1
NA18906.hp2
NA18979.hp1
NA19012.hp2
NA19089.hp2
homoSapiens_chm13v2.hp1
 3_prime_UTR_variant MODIFIER c.*721dupT
c.*721dupT
HOXA5 ENSG00000106004.5 transcript ENST00000222726.4 protein_coding 2/2 721 chr7 27141113
chr7:27141113 CA
CA
 C
C
 5 a0001c0001t0003
a0001c0001t0006
a0001c0001t0011
others(2): Show 
a0001c0001t0003
a0001c0001t0006
a0001c0001t0011
a0001c0001t0016
a0001c0001t0018
 70 HG00558.hp1
HG00597.hp2
HG00621.hp1
others(67): Show 
HG00558.hp1
HG00597.hp2
HG00621.hp1
HG00741.hp1
HG01069.hp2
HG01071.hp2
HG01081.hp2
HG01099.hp1
HG01106.hp1
HG01175.hp2
HG01192.hp2
HG01255.hp1
HG01255.hp2
HG01256.hp1
HG01261.hp2
HG01346.hp1
HG01361.hp1
HG01928.hp1
HG01934.hp1
HG01934.hp2
HG01952.hp1
HG01952.hp2
HG01975.hp1
HG01978.hp1
HG01981.hp2
HG02004.hp2
HG02056.hp1
HG02071.hp1
HG02080.hp1
HG02083.hp2
HG02148.hp2
HG02155.hp1
HG02257.hp1
HG02258.hp1
HG02293.hp1
HG02523.hp1
HG02559.hp2
HG02723.hp1
HG02818.hp1
HG02895.hp1
HG02965.hp1
HG03041.hp2
HG03130.hp2
HG03139.hp1
HG03225.hp1
HG04204.hp2
HG04228.hp2
NA18950.hp2
NA18951.hp2
NA18957.hp2
NA18960.hp2
NA18966.hp1
NA18971.hp2
NA18977.hp1
NA18980.hp1
NA18992.hp2
NA18997.hp1
NA18999.hp1
NA19007.hp1
NA19009.hp1
NA19010.hp1
NA19010.hp2
NA19058.hp1
NA19060.hp1
NA19062.hp1
NA19066.hp1
NA19067.hp1
NA19090.hp2
NA20300.hp2
NA21309.hp1
 3_prime_UTR_variant MODIFIER c.*721delT
c.*721delT
HOXA5 ENSG00000106004.5 transcript ENST00000222726.4 protein_coding 2/2 721 chr7 27141113
chr7:27141113 CAA
CAA
 C
C
 6 a0001c0001t0001
a0001c0001t0005
a0001c0001t0013
others(3): Show 
a0001c0001t0001
a0001c0001t0005
a0001c0001t0013
a0001c0001t0014
a0001c0001t0015
a0002c0002t0001
 157 HG00099.hp1
HG00140.hp1
HG00140.hp2
others(154): Show 
HG00099.hp1
HG00140.hp1
HG00140.hp2
HG00280.hp2
HG00408.hp1
HG00438.hp2
HG00609.hp1
HG00609.hp2
HG00621.hp2
HG00642.hp2
HG00673.hp1
HG00733.hp2
HG00735.hp1
HG00735.hp2
HG01069.hp1
HG01070.hp2
HG01081.hp1
HG01109.hp1
HG01109.hp2
HG01167.hp2
HG01175.hp1
HG01256.hp2
HG01258.hp1
HG01258.hp2
HG01261.hp1
HG01346.hp2
HG01361.hp2
HG01496.hp2
HG01516.hp1
HG01516.hp2
HG02015.hp2
HG02027.hp2
HG02040.hp2
HG02071.hp2
HG02074.hp2
HG02080.hp2
HG02109.hp2
HG02132.hp2
HG02145.hp1
HG02145.hp2
HG02300.hp2
HG02486.hp1
HG02523.hp2
HG02602.hp2
HG02615.hp1
HG02717.hp2
HG02723.hp2
HG02735.hp1
HG02735.hp2
HG02738.hp1
HG02738.hp2
HG02809.hp2
HG02896.hp2
HG02897.hp2
HG02922.hp1
HG02922.hp2
HG02965.hp2
HG02976.hp1
HG02976.hp2
HG03041.hp1
HG03098.hp1
HG03098.hp2
HG03130.hp1
HG03195.hp1
HG03453.hp1
HG03486.hp2
HG03490.hp1
HG03491.hp1
HG03492.hp2
HG03516.hp1
HG03516.hp2
HG03540.hp2
HG03654.hp1
HG03669.hp2
HG03688.hp1
HG03704.hp1
HG03927.hp2
HG03942.hp2
HG04115.hp1
HG04115.hp2
HG04184.hp2
HG04199.hp1
HG06807.hp1
HG06807.hp2
NA18522.hp1
NA18747.hp2
NA18939.hp1
NA18939.hp2
NA18940.hp1
NA18942.hp1
NA18942.hp2
NA18944.hp1
NA18944.hp2
NA18950.hp1
NA18951.hp1
NA18952.hp1
NA18952.hp2
NA18953.hp1
NA18954.hp1
NA18954.hp2
NA18957.hp1
NA18962.hp1
NA18963.hp1
NA18963.hp2
NA18964.hp2
NA18965.hp2
NA18966.hp2
NA18969.hp2
NA18970.hp1
NA18970.hp2
NA18971.hp1
NA18973.hp2
NA18975.hp1
NA18977.hp2
NA18979.hp2
NA18980.hp2
NA18982.hp2
NA18984.hp1
NA18984.hp2
NA18988.hp1
NA18988.hp2
NA18990.hp1
NA18993.hp1
NA18995.hp1
NA18995.hp2
NA18999.hp2
NA19000.hp1
NA19000.hp2
NA19003.hp1
NA19003.hp2
NA19005.hp1
NA19005.hp2
NA19007.hp2
NA19011.hp2
NA19012.hp1
NA19030.hp1
NA19030.hp2
NA19043.hp2
NA19054.hp1
NA19055.hp1
NA19062.hp2
NA19065.hp1
NA19068.hp1
NA19070.hp1
NA19070.hp2
NA19072.hp1
NA19079.hp2
NA19080.hp1
NA19080.hp2
NA19088.hp1
NA19088.hp2
NA19089.hp1
NA19090.hp1
NA19091.hp2
NA20129.hp1
NA20752.hp1
NA20905.hp1
 3_prime_UTR_variant MODIFIER c.*720_*721delTT
c.*720_*721delTT
HOXA5 ENSG00000106004.5 transcript ENST00000222726.4 protein_coding 2/2 720 chr7 27141113
chr7:27141113 CAAA
CAAA
 C
C
 4 a0000c0003t0021
a0001c0001t0002
a0001c0001t0010
others(1): Show 
a0000c0003t0021
a0001c0001t0002
a0001c0001t0010
a0001c0001t0012
 116 HG00099.hp2
HG00280.hp1
HG00408.hp2
others(113): Show 
HG00099.hp2
HG00280.hp1
HG00408.hp2
HG00423.hp1
HG00423.hp2
HG00438.hp1
HG00544.hp1
HG00544.hp2
HG00558.hp2
HG00597.hp1
HG00642.hp1
HG00673.hp2
HG00733.hp1
HG00738.hp2
HG00741.hp2
HG01070.hp1
HG01071.hp1
HG01099.hp2
HG01106.hp2
HG01123.hp1
HG01123.hp2
HG01167.hp1
HG01169.hp1
HG01169.hp2
HG01192.hp1
HG01358.hp1
HG01358.hp2
HG01496.hp1
HG01928.hp2
HG01975.hp2
HG01978.hp2
HG01981.hp1
HG01993.hp1
HG01993.hp2
HG02004.hp1
HG02015.hp1
HG02027.hp1
HG02040.hp1
HG02056.hp2
HG02074.hp1
HG02083.hp1
HG02132.hp1
HG02135.hp1
HG02135.hp2
HG02148.hp1
HG02155.hp2
HG02165.hp1
HG02165.hp2
HG02273.hp1
HG02273.hp2
HG02280.hp1
HG02300.hp1
HG02602.hp1
HG02630.hp1
HG02717.hp1
HG02809.hp1
HG03017.hp2
HG03225.hp2
HG03239.hp1
HG03239.hp2
HG03490.hp2
HG03492.hp1
HG03654.hp2
HG03669.hp1
HG03710.hp1
HG03710.hp2
HG04204.hp1
HG04228.hp1
NA18747.hp1
NA18940.hp2
NA18943.hp1
NA18943.hp2
NA18945.hp1
NA18945.hp2
NA18948.hp1
NA18948.hp2
NA18953.hp2
NA18960.hp1
NA18964.hp1
NA18965.hp1
NA18967.hp1
NA18967.hp2
NA18968.hp1
NA18968.hp2
NA18969.hp1
NA18975.hp2
NA18982.hp1
NA18987.hp1
NA18987.hp2
NA18990.hp2
NA18993.hp2
NA18998.hp1
NA18998.hp2
NA19009.hp2
NA19011.hp1
NA19043.hp1
NA19055.hp2
NA19057.hp1
NA19057.hp2
NA19058.hp2
NA19060.hp2
NA19064.hp1
NA19064.hp2
NA19065.hp2
NA19066.hp2
NA19067.hp2
NA19072.hp2
NA19084.hp1
NA19084.hp2
NA19091.hp1
NA19240.hp1
NA20300.hp1
NA20752.hp2
NA20805.hp2
NA20905.hp2
NA21309.hp2
 3_prime_UTR_variant MODIFIER c.*719_*721delTTT
c.*719_*721delTTT
HOXA5 ENSG00000106004.5 transcript ENST00000222726.4 protein_coding 2/2 719 chr7 27141113
chr7:27141113 CAAAA
CAAAA
 C
C
 1 a0001c0001t0009
a0001c0001t0009
 7 HG02886.hp2
HG03486.hp1
NA18962.hp2
others(4): Show 
HG02886.hp2
HG03486.hp1
NA18962.hp2
NA18992.hp1
NA19068.hp2
NA19079.hp1
NA20805.hp1
 3_prime_UTR_variant MODIFIER c.*718_*721delTTTT
c.*718_*721delTTTT
HOXA5 ENSG00000106004.5 transcript ENST00000222726.4 protein_coding 2/2 718 chr7 27141113
chr7:27141113 CAAAAAAA
others(7): Show 
CAAAAAAAAAAAAAA
 C
C
 1 a0001c0001t0019
a0001c0001t0019
 1 HG02615.hp2
HG02615.hp2
 3_prime_UTR_variant MODIFIER c.*708_*721delTTTTTT
others(8): Show 
c.*708_*721delTTTTTTTTTTTTTT
HOXA5 ENSG00000106004.5 transcript ENST00000222726.4 protein_coding 2/2 708 chr7 27141113
chr7:27141131 A
A
 T
T
 1 a0001c0001t0010
a0001c0001t0010
 5 HG00408.hp2
HG00423.hp2
NA18943.hp1
others(2): Show 
HG00408.hp2
HG00423.hp2
NA18943.hp1
NA19064.hp2
NA19091.hp1
 3_prime_UTR_variant MODIFIER c.*704T>A
c.*704T>A
HOXA5 ENSG00000106004.5 transcript ENST00000222726.4 protein_coding 2/2 704 chr7 27141131
chr7:27141375 A
A
 G
G
 2 a0001c0001t0015
a0001c0001t0016
a0001c0001t0015
a0001c0001t0016
 5 HG01081.hp2
HG02145.hp2
HG02559.hp2
others(2): Show 
HG01081.hp2
HG02145.hp2
HG02559.hp2
HG02723.hp2
NA20129.hp1
 3_prime_UTR_variant MODIFIER c.*460T>C
c.*460T>C
HOXA5 ENSG00000106004.5 transcript ENST00000222726.4 protein_coding 2/2 460 chr7 27141375
chr7:27141376 C
C
 A
A
 2 a0001c0001t0015
a0001c0001t0016
a0001c0001t0015
a0001c0001t0016
 5 HG01081.hp2
HG02145.hp2
HG02559.hp2
others(2): Show 
HG01081.hp2
HG02145.hp2
HG02559.hp2
HG02723.hp2
NA20129.hp1
 3_prime_UTR_variant MODIFIER c.*459G>T
c.*459G>T
HOXA5 ENSG00000106004.5 transcript ENST00000222726.4 protein_coding 2/2 459 chr7 27141376
chr7:27141473 A
A
 C
C
 2 a0001c0001t0013
a0001c0001t0018
a0001c0001t0013
a0001c0001t0018
 5 HG00735.hp1
HG01167.hp2
HG01934.hp2
others(2): Show 
HG00735.hp1
HG01167.hp2
HG01934.hp2
HG03491.hp1
HG03492.hp2
 3_prime_UTR_variant MODIFIER c.*362T>G
c.*362T>G
HOXA5 ENSG00000106004.5 transcript ENST00000222726.4 protein_coding 2/2 362 chr7 27141473
chr7:27141526 G
G
 GT
GT
 12 a0000c0003t0021
a0001c0001t0001
a0001c0001t0002
others(9): Show 
a0000c0003t0021
a0001c0001t0001
a0001c0001t0002
a0001c0001t0006
a0001c0001t0008
a0001c0001t0009
a0001c0001t0010
a0001c0001t0014
a0001c0001t0015
a0001c0001t0016
a0001c0004t0008
a0002c0002t0001
 273 HG00099.hp1
HG00099.hp2
HG00140.hp2
others(270): Show 
HG00099.hp1
HG00099.hp2
HG00140.hp2
HG00280.hp1
HG00280.hp2
HG00408.hp1
HG00408.hp2
HG00423.hp1
HG00423.hp2
HG00438.hp1
HG00438.hp2
HG00544.hp1
HG00544.hp2
HG00558.hp2
HG00597.hp1
HG00609.hp1
HG00609.hp2
HG00621.hp1
HG00621.hp2
HG00642.hp1
HG00642.hp2
HG00673.hp1
HG00673.hp2
HG00733.hp1
HG00733.hp2
HG00735.hp2
HG00738.hp2
HG00741.hp2
HG01069.hp1
HG01070.hp1
HG01070.hp2
HG01071.hp1
HG01081.hp1
HG01081.hp2
HG01099.hp2
HG01106.hp1
HG01106.hp2
HG01109.hp1
HG01109.hp2
HG01123.hp1
HG01123.hp2
HG01167.hp1
HG01169.hp1
HG01169.hp2
HG01175.hp1
HG01192.hp1
HG01192.hp2
HG01256.hp2
HG01258.hp1
HG01258.hp2
HG01346.hp2
HG01358.hp1
HG01358.hp2
HG01361.hp1
HG01361.hp2
HG01496.hp1
HG01496.hp2
HG01516.hp1
HG01516.hp2
HG01884.hp2
HG01928.hp2
HG01952.hp1
HG01975.hp2
HG01978.hp1
HG01978.hp2
HG01981.hp1
HG01993.hp1
HG01993.hp2
HG02004.hp1
HG02015.hp1
HG02015.hp2
HG02027.hp1
HG02027.hp2
HG02040.hp1
HG02040.hp2
HG02056.hp2
HG02071.hp2
HG02074.hp1
HG02074.hp2
HG02080.hp2
HG02083.hp1
HG02109.hp2
HG02132.hp1
HG02132.hp2
HG02135.hp1
HG02135.hp2
HG02145.hp1
HG02145.hp2
HG02148.hp1
HG02155.hp2
HG02165.hp1
HG02165.hp2
HG02273.hp1
HG02273.hp2
HG02300.hp1
HG02523.hp2
HG02559.hp2
HG02572.hp1
HG02602.hp1
HG02602.hp2
HG02717.hp1
HG02717.hp2
HG02723.hp1
HG02723.hp2
HG02735.hp2
HG02738.hp1
HG02738.hp2
HG02809.hp1
HG02818.hp1
HG02886.hp2
HG02922.hp1
HG02970.hp1
HG02976.hp1
HG02976.hp2
HG03017.hp2
HG03041.hp1
HG03098.hp1
HG03130.hp1
HG03195.hp1
HG03209.hp1
HG03209.hp2
HG03225.hp1
HG03239.hp1
HG03239.hp2
HG03453.hp1
HG03486.hp1
HG03490.hp1
HG03490.hp2
HG03492.hp1
HG03654.hp1
HG03654.hp2
HG03669.hp1
HG03669.hp2
HG03688.hp1
HG03704.hp1
HG03704.hp2
HG03710.hp1
HG03710.hp2
HG03927.hp2
HG03942.hp2
HG04115.hp1
HG04115.hp2
HG04184.hp2
HG04199.hp1
HG04204.hp1
HG04204.hp2
HG04228.hp1
HG04228.hp2
HG06807.hp1
HG06807.hp2
NA18747.hp1
NA18747.hp2
NA18939.hp1
NA18939.hp2
NA18940.hp1
NA18940.hp2
NA18942.hp1
NA18943.hp1
NA18943.hp2
NA18944.hp1
NA18944.hp2
NA18945.hp1
NA18945.hp2
NA18948.hp1
NA18948.hp2
NA18950.hp1
NA18951.hp1
NA18952.hp1
NA18952.hp2
NA18953.hp1
NA18953.hp2
NA18954.hp1
NA18954.hp2
NA18957.hp1
NA18960.hp1
NA18962.hp1
NA18962.hp2
NA18963.hp1
NA18963.hp2
NA18964.hp1
NA18964.hp2
NA18965.hp1
NA18965.hp2
NA18966.hp2
NA18967.hp1
NA18967.hp2
NA18968.hp1
NA18968.hp2
NA18969.hp1
NA18969.hp2
NA18970.hp1
NA18971.hp1
NA18973.hp2
NA18975.hp1
NA18975.hp2
NA18977.hp2
NA18979.hp2
NA18980.hp2
NA18982.hp1
NA18982.hp2
NA18984.hp1
NA18984.hp2
NA18987.hp1
NA18987.hp2
NA18988.hp1
NA18988.hp2
NA18990.hp1
NA18990.hp2
NA18992.hp1
NA18993.hp1
NA18993.hp2
NA18995.hp1
NA18995.hp2
NA18997.hp1
NA18997.hp2
NA18998.hp1
NA18998.hp2
NA18999.hp2
NA19000.hp2
NA19003.hp1
NA19003.hp2
NA19005.hp1
NA19005.hp2
NA19007.hp2
NA19009.hp2
NA19010.hp2
NA19011.hp1
NA19011.hp2
NA19012.hp1
NA19030.hp1
NA19043.hp1
NA19054.hp1
NA19055.hp1
NA19055.hp2
NA19057.hp1
NA19057.hp2
NA19058.hp2
NA19060.hp2
NA19062.hp1
NA19062.hp2
NA19064.hp1
NA19064.hp2
NA19065.hp1
NA19065.hp2
NA19066.hp2
NA19067.hp2
NA19068.hp1
NA19068.hp2
NA19070.hp1
NA19070.hp2
NA19072.hp1
NA19072.hp2
NA19079.hp1
NA19079.hp2
NA19080.hp1
NA19080.hp2
NA19084.hp1
NA19084.hp2
NA19088.hp1
NA19088.hp2
NA19089.hp1
NA19090.hp1
NA19091.hp1
NA19091.hp2
NA20129.hp1
NA20129.hp2
NA20300.hp1
NA20752.hp2
NA20805.hp1
NA20805.hp2
NA20905.hp1
NA20905.hp2
NA21309.hp2
 3_prime_UTR_variant MODIFIER c.*308dupA
c.*308dupA
HOXA5 ENSG00000106004.5 transcript ENST00000222726.4 protein_coding 2/2 308 chr7 27141526
chr7:27141754 A
A
 G
G
 2 a0001c0001t0012
a0001c0001t0014
a0001c0001t0012
a0001c0001t0014
 7 HG02280.hp1
HG02630.hp1
HG02922.hp1
others(4): Show 
HG02280.hp1
HG02630.hp1
HG02922.hp1
HG02976.hp2
HG03130.hp1
HG03225.hp2
NA19240.hp1
 3_prime_UTR_variant MODIFIER c.*81T>C
c.*81T>C
HOXA5 ENSG00000106004.5 transcript ENST00000222726.4 protein_coding 2/2 81 chr7 27141754
chr7:27141797 T
T
 A
A
 1 a0001c0001t0020
a0001c0001t0020
 1 HG03195.hp2
HG03195.hp2
 3_prime_UTR_variant MODIFIER c.*38A>T
c.*38A>T
HOXA5 ENSG00000106004.5 transcript ENST00000222726.4 protein_coding 2/2 38 chr7 27141797
chr7:27141833 A
A
 T
T
 2 a0001c0001t0011
a0001c0001t0017
a0001c0001t0011
a0001c0001t0017
 5 HG01069.hp2
HG01071.hp2
HG02258.hp1
others(2): Show 
HG01069.hp2
HG01071.hp2
HG02258.hp1
HG02896.hp1
HG02965.hp1
 3_prime_UTR_variant MODIFIER c.*2T>A
c.*2T>A
HOXA5 ENSG00000106004.5 transcript ENST00000222726.4 protein_coding 2/2 2 chr7 27141833

chr:pos ref alt #
# of ghapid:genebody level
 ghapids #
# of haplotypeids
 haplotypeids annotation impact hgvs_c hgvs_p genename geneid featuretype featureid genebody_biotype rank cdna
cdna pos length
 cds
cds pos length
 aa
aa pos length
 distance status chr pos
chr7:27142405 C
C
 A
A
 1 a0001c0001t0004g0051
a0001c0001t0004g0051
 1 HG03491.hp2
HG03491.hp2
 intron_variant MODIFIER c.563-320G>T
c.563-320G>T
HOXA5 ENSG00000106004.5 transcript ENST00000222726.4 protein_coding 1/1 chr7 27142405
chr7:27142503 T
T
 C
C
 2 a0001c0001t0007g0044
a0001c0001t0016g0034
a0001c0001t0007g0044
a0001c0001t0016g0034
 2 HG02559.hp2
NA19012.hp2
HG02559.hp2
NA19012.hp2
 intron_variant MODIFIER c.563-418A>G
c.563-418A>G
HOXA5 ENSG00000106004.5 transcript ENST00000222726.4 protein_coding 1/1 chr7 27142503
chr7:27142523 G
G
 A
A
 8 a0001c0001t0001g0008
a0001c0001t0001g0026
a0001c0001t0002g0004
others(5): Show 
a0001c0001t0001g0008
a0001c0001t0001g0026
a0001c0001t0002g0004
a0001c0001t0002g0035
a0001c0001t0003g0048
a0001c0001t0005g0029
a0001c0001t0006g0047
a0001c0001t0009g0028
 52 HG00280.hp2
HG00423.hp1
HG00438.hp2
others(49): Show 
HG00280.hp2
HG00423.hp1
HG00438.hp2
HG00544.hp1
HG00544.hp2
HG00558.hp2
HG00597.hp1
HG00621.hp2
HG00673.hp1
HG00738.hp2
HG01261.hp2
HG01346.hp2
HG01358.hp1
HG01358.hp2
HG01952.hp1
HG02015.hp1
HG02027.hp1
HG02040.hp2
HG02056.hp2
HG02074.hp1
HG02083.hp1
HG02135.hp1
HG02135.hp2
HG02155.hp2
HG02165.hp1
HG02300.hp2
HG03490.hp1
HG03669.hp1
NA18940.hp2
NA18945.hp1
NA18945.hp2
NA18954.hp2
NA18960.hp1
NA18963.hp1
NA18963.hp2
NA18964.hp1
NA18965.hp1
NA18968.hp1
NA18982.hp1
NA18984.hp2
NA18987.hp2
NA18993.hp2
NA19000.hp1
NA19003.hp1
NA19009.hp2
NA19057.hp2
NA19058.hp2
NA19065.hp2
NA19067.hp2
NA19079.hp1
NA20752.hp2
NA20805.hp1
 intron_variant MODIFIER c.563-438C>T
c.563-438C>T
HOXA5 ENSG00000106004.5 transcript ENST00000222726.4 protein_coding 1/1 chr7 27142523
chr7:27142584 C
C
 A
A
 1 a0001c0001t0001g0036
a0001c0001t0001g0036
 1 NA18953.hp1
NA18953.hp1
 intron_variant MODIFIER c.562+462G>T
c.562+462G>T
HOXA5 ENSG00000106004.5 transcript ENST00000222726.4 protein_coding 1/1 chr7 27142584
chr7:27142609 T
T
 G
G
 1 a0001c0001t0001g0037
a0001c0001t0001g0037
 1 NA19054.hp1
NA19054.hp1
 intron_variant MODIFIER c.562+437A>C
c.562+437A>C
HOXA5 ENSG00000106004.5 transcript ENST00000222726.4 protein_coding 1/1 chr7 27142609
chr7:27142611 C
C
 A
A
 2 a0001c0001t0001g0018
a0001c0001t0006g0049
a0001c0001t0001g0018
a0001c0001t0006g0049
 5 NA18997.hp1
NA19005.hp1
NA19079.hp2
others(2): Show 
NA18997.hp1
NA19005.hp1
NA19079.hp2
NA19088.hp1
NA19089.hp1
 intron_variant MODIFIER c.562+435G>T
c.562+435G>T
HOXA5 ENSG00000106004.5 transcript ENST00000222726.4 protein_coding 1/1 chr7 27142611
chr7:27142626 C
C
 T
T
 20 a0000c0003t0021g0031
a0001c0001t0001g0001
a0001c0001t0001g0023
others(17): Show 
a0000c0003t0021g0031
a0001c0001t0001g0001
a0001c0001t0001g0023
a0001c0001t0001g0026
a0001c0001t0001g0036
a0001c0001t0001g0037
a0001c0001t0002g0002
a0001c0001t0002g0035
a0001c0001t0003g0033
a0001c0001t0005g0021
a0001c0001t0006g0007
a0001c0001t0006g0045
a0001c0001t0008g0012
a0001c0001t0009g0011
a0001c0001t0010g0010
a0001c0001t0015g0020
a0001c0001t0016g0032
a0001c0001t0016g0034
a0001c0004t0008g0052
a0002c0002t0001g0025
 217 HG00099.hp1
HG00099.hp2
HG00140.hp2
others(214): Show 
HG00099.hp1
HG00099.hp2
HG00140.hp2
HG00280.hp1
HG00280.hp2
HG00408.hp1
HG00408.hp2
HG00423.hp2
HG00438.hp1
HG00609.hp1
HG00609.hp2
HG00621.hp1
HG00642.hp1
HG00642.hp2
HG00673.hp2
HG00733.hp1
HG00733.hp2
HG00735.hp2
HG00741.hp2
HG01069.hp1
HG01070.hp1
HG01070.hp2
HG01071.hp1
HG01081.hp1
HG01081.hp2
HG01099.hp2
HG01106.hp2
HG01109.hp1
HG01109.hp2
HG01123.hp1
HG01123.hp2
HG01167.hp1
HG01169.hp1
HG01169.hp2
HG01175.hp1
HG01192.hp1
HG01192.hp2
HG01256.hp2
HG01258.hp1
HG01258.hp2
HG01361.hp1
HG01361.hp2
HG01496.hp1
HG01496.hp2
HG01516.hp1
HG01516.hp2
HG01884.hp2
HG01928.hp2
HG01975.hp2
HG01978.hp1
HG01978.hp2
HG01981.hp1
HG01993.hp1
HG01993.hp2
HG02004.hp1
HG02015.hp2
HG02027.hp2
HG02040.hp1
HG02040.hp2
HG02071.hp2
HG02074.hp2
HG02080.hp2
HG02109.hp2
HG02132.hp1
HG02132.hp2
HG02145.hp1
HG02145.hp2
HG02148.hp1
HG02165.hp2
HG02273.hp1
HG02273.hp2
HG02300.hp1
HG02523.hp2
HG02559.hp2
HG02572.hp1
HG02602.hp1
HG02602.hp2
HG02717.hp1
HG02717.hp2
HG02723.hp1
HG02723.hp2
HG02735.hp2
HG02738.hp1
HG02738.hp2
HG02809.hp1
HG02818.hp1
HG02886.hp2
HG02922.hp2
HG02970.hp1
HG02976.hp1
HG03017.hp2
HG03041.hp1
HG03098.hp1
HG03098.hp2
HG03195.hp1
HG03209.hp1
HG03209.hp2
HG03225.hp1
HG03239.hp1
HG03239.hp2
HG03453.hp1
HG03486.hp1
HG03490.hp2
HG03492.hp1
HG03654.hp1
HG03654.hp2
HG03669.hp2
HG03688.hp1
HG03704.hp1
HG03704.hp2
HG03710.hp1
HG03710.hp2
HG03927.hp2
HG03942.hp2
HG04115.hp1
HG04184.hp2
HG04199.hp1
HG04204.hp1
HG04204.hp2
HG04228.hp1
HG04228.hp2
HG06807.hp1
HG06807.hp2
NA18522.hp1
NA18747.hp2
NA18939.hp1
NA18939.hp2
NA18940.hp1
NA18942.hp1
NA18943.hp1
NA18943.hp2
NA18944.hp1
NA18944.hp2
NA18948.hp1
NA18948.hp2
NA18950.hp1
NA18951.hp1
NA18952.hp1
NA18952.hp2
NA18953.hp1
NA18953.hp2
NA18954.hp1
NA18957.hp1
NA18962.hp1
NA18962.hp2
NA18964.hp2
NA18965.hp1
NA18965.hp2
NA18966.hp2
NA18967.hp1
NA18967.hp2
NA18968.hp2
NA18969.hp1
NA18969.hp2
NA18970.hp1
NA18971.hp1
NA18973.hp2
NA18975.hp1
NA18975.hp2
NA18977.hp2
NA18979.hp2
NA18980.hp2
NA18982.hp2
NA18984.hp1
NA18987.hp1
NA18988.hp1
NA18988.hp2
NA18990.hp1
NA18990.hp2
NA18992.hp1
NA18993.hp1
NA18995.hp1
NA18995.hp2
NA18998.hp1
NA18998.hp2
NA18999.hp2
NA19000.hp2
NA19003.hp2
NA19005.hp2
NA19007.hp2
NA19010.hp2
NA19011.hp1
NA19011.hp2
NA19012.hp1
NA19030.hp1
NA19043.hp1
NA19054.hp1
NA19055.hp1
NA19055.hp2
NA19057.hp1
NA19058.hp1
NA19060.hp2
NA19062.hp1
NA19062.hp2
NA19064.hp1
NA19064.hp2
NA19065.hp1
NA19066.hp2
NA19068.hp1
NA19068.hp2
NA19070.hp1
NA19070.hp2
NA19072.hp1
NA19072.hp2
NA19080.hp1
NA19080.hp2
NA19084.hp1
NA19084.hp2
NA19088.hp2
NA19090.hp1
NA19091.hp1
NA19091.hp2
NA20129.hp1
NA20300.hp1
NA20805.hp2
NA20905.hp1
NA21309.hp2
 intron_variant MODIFIER c.562+420G>A
c.562+420G>A
HOXA5 ENSG00000106004.5 transcript ENST00000222726.4 protein_coding 1/1 chr7 27142626
chr7:27142710 T
T
 G
G
 11 a0001c0001t0001g0008
a0001c0001t0001g0018
a0001c0001t0001g0023
others(8): Show 
a0001c0001t0001g0008
a0001c0001t0001g0018
a0001c0001t0001g0023
a0001c0001t0002g0004
a0001c0001t0002g0046
a0001c0001t0003g0048
a0001c0001t0005g0029
a0001c0001t0006g0045
a0001c0001t0006g0047
a0001c0001t0006g0049
a0001c0001t0009g0028
 59 HG00423.hp1
HG00438.hp2
HG00544.hp1
others(56): Show 
HG00423.hp1
HG00438.hp2
HG00544.hp1
HG00544.hp2
HG00558.hp2
HG00597.hp1
HG00621.hp2
HG00642.hp2
HG00673.hp1
HG00738.hp2
HG01070.hp2
HG01192.hp2
HG01261.hp2
HG01346.hp2
HG01358.hp1
HG01358.hp2
HG01516.hp1
HG01952.hp1
HG02015.hp1
HG02027.hp1
HG02056.hp2
HG02074.hp1
HG02083.hp1
HG02135.hp1
HG02135.hp2
HG02155.hp2
HG02165.hp1
HG02300.hp2
HG03490.hp1
HG03669.hp1
NA18747.hp1
NA18940.hp2
NA18945.hp1
NA18945.hp2
NA18954.hp2
NA18960.hp1
NA18963.hp1
NA18963.hp2
NA18964.hp1
NA18968.hp1
NA18982.hp1
NA18984.hp2
NA18987.hp2
NA18993.hp2
NA18997.hp1
NA19000.hp1
NA19003.hp1
NA19005.hp1
NA19009.hp2
NA19057.hp2
NA19058.hp2
NA19065.hp2
NA19067.hp2
NA19079.hp1
NA19079.hp2
NA19088.hp1
NA19089.hp1
NA20752.hp2
NA20805.hp1
 intron_variant MODIFIER c.562+336A>C
c.562+336A>C
HOXA5 ENSG00000106004.5 transcript ENST00000222726.4 protein_coding 1/1 chr7 27142710
chr7:27142811 T
T
 C
C
 3 a0001c0001t0004g0024
a0001c0001t0004g0051
a0001c0001t0007g0030
a0001c0001t0004g0024
a0001c0001t0004g0051
a0001c0001t0007g0030
 6 HG02293.hp2
HG03017.hp1
HG03491.hp2
others(3): Show 
HG02293.hp2
HG03017.hp1
HG03491.hp2
HG03927.hp1
HG04184.hp1
homoSapiens_chm13v2.hp1
 intron_variant MODIFIER c.562+235A>G
c.562+235A>G
HOXA5 ENSG00000106004.5 transcript ENST00000222726.4 protein_coding 1/1 chr7 27142811
chr7:27143014 G
G
 A
A
 7 a0001c0001t0003g0013
a0001c0001t0004g0009
a0001c0001t0004g0024
others(4): Show 
a0001c0001t0003g0013
a0001c0001t0004g0009
a0001c0001t0004g0024
a0001c0001t0004g0051
a0001c0001t0007g0019
a0001c0001t0007g0030
a0001c0001t0020g0050
 25 HG01255.hp2
HG02257.hp1
HG02258.hp2
others(22): Show 
HG01255.hp2
HG02257.hp1
HG02258.hp2
HG02280.hp2
HG02293.hp2
HG02486.hp2
HG02559.hp1
HG02572.hp2
HG02818.hp2
HG02886.hp1
HG02895.hp2
HG02897.hp1
HG02970.hp2
HG03017.hp1
HG03041.hp2
HG03130.hp2
HG03139.hp1
HG03195.hp2
HG03453.hp2
HG03491.hp2
HG03927.hp1
HG04184.hp1
NA18906.hp2
NA19240.hp2
homoSapiens_chm13v2.hp1
 intron_variant MODIFIER c.562+32C>T
c.562+32C>T
HOXA5 ENSG00000106004.5 transcript ENST00000222726.4 protein_coding 1/1 chr7 27143014

  • GeneCards
  • OpenTarget
  • The Human Protein Atlas
  • Gnomad v4.1.0
  • PhewebJP (Japan)
  • UKB-TOPMed (UMich) (UK and US)
  • FinnGen r11 (Finland)
  • KoGES (Korean)
  • Mouse Phenotype
  • Zebra Phenotype
  • TogoVar

  • DNA
  • Satellite
  • All Snps 1.4.2
  • RC
  • snRNA
  • SINE
  • GC %
  • Simple_repeat
  • RNA
  • Retroposon
  • Unknown
  • Low_complexity
  • LINE
  • scRNA
  • CpG Islands
  • Phastcons (20 way)
  • srpRNA
  • Common Snps 1.4.2
  • rRNA
  • LTR
  • tRNA

  • Axiom Genome-Wide Array (Japonica Array V1)
  • Axiom Genome-Wide Array (Japonica Array V2)
  • Axiom Genome-Wide ASI Array V1 (ASI V1)
​

IGV Connection Help

IGV must be running on your computer before clicking the button.

If your browser shows the "cannot open the page" error, launch IGV and allow access via port 60151:

  1. Open IGV on your computer
  2. In IGV's menu bar: View → Preferences…
  3. Click on the "Advanced" tab
  4. Check "Enable port"
  5. Set the port number to 60151
  6. Click OK to save

For more details, please refer to Information → FAQ.