JoGo: Joint Open Genome and Omics Platform

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geneid	8678
ensemblid	ENSG00000126581.13
hgncid	1034
symbol	BECN1
name	beclin 1
refseq_nuc	NM_001313998.2
refseq_prot	NP_001300927.1
ensembl_nuc	ENST00000590099.6
ensembl_prot	ENSP00000465364.1
mane_status	MANE Select
chr	chr17
start	42810134
end	42824282
strand	-
ver	v1.2
region	chr17:42810134-42824282
region5000	chr17:42805134-42829282
regionname0	BECN1_chr17_42810134_42824282
regionname5000	BECN1_chr17_42805134_42829282

ahapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	alen	total	AFR	AMR	EAS	EUR	SAS	JPT	regionname	genename	aa	chr	start	end
a0001	1/1	450	273	82	56	90	12	31	58	BECN1_chr17_42805134_42829282	BECN1	copy fasta	chr17	42805134	42829282
a0002	0/0	450	1	0	0	0	0	1	0	BECN1_chr17_42805134_42829282	BECN1	copy fasta	chr17	42805134	42829282

chapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	clen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	cseq	chr	start	end
c0001	1/1	1353	269	78	56	90	12	31	BECN1_chr17_42805134_42829282	BECN1	copy fasta	chr17	42805134	42829282
c0002	0/0	1353	3	3	0	0	0	0	BECN1_chr17_42805134_42829282	BECN1	copy fasta	chr17	42805134	42829282
c0003	0/0	1353	1	0	0	0	0	1	BECN1_chr17_42805134_42829282	BECN1	copy fasta	chr17	42805134	42829282
c0004	0/0	1353	1	1	0	0	0	0	BECN1_chr17_42805134_42829282	BECN1	copy fasta	chr17	42805134	42829282

thapid	grch38 chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	tlen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	tseq	chr	start	end
t0001	1/1	757	201	77	50	40	8	24	BECN1_chr17_42805134_42829282	BECN1	copy fasta	chr17	42805134	42829282
t0002	0/0	757	52	1	6	37	4	4	BECN1_chr17_42805134_42829282	BECN1	copy fasta	chr17	42805134	42829282
t0003	0/0	757	13	2	0	7	0	4	BECN1_chr17_42805134_42829282	BECN1	copy fasta	chr17	42805134	42829282
t0004	0/0	757	4	0	0	4	0	0	BECN1_chr17_42805134_42829282	BECN1	copy fasta	chr17	42805134	42829282
t0005	0/0	757	2	0	0	2	0	0	BECN1_chr17_42805134_42829282	BECN1	copy fasta	chr17	42805134	42829282
t0006	0/0	757	2	2	0	0	0	0	BECN1_chr17_42805134_42829282	BECN1	copy fasta	chr17	42805134	42829282

ghapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	chr	start	end
g0001	0/1	47	12	13	16	1	4	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
g0002	0/0	23	1	4	13	4	1	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
g0003	0/0	14	4	1	5	0	4	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
g0004	0/0	12	0	6	1	3	2	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
g0005	0/0	11	10	0	0	0	1	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
g0006	0/0	7	0	0	5	0	2	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
g0007	0/0	6	0	6	0	0	0	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
g0008	0/0	6	0	1	5	0	0	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
g0009	0/0	6	0	3	2	0	1	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
g0010	0/0	6	6	0	0	0	0	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
g0011	0/0	6	0	5	1	0	0	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
g0012	0/0	5	4	1	0	0	0	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
g0013	0/0	5	0	3	1	0	1	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
g0014	0/0	4	4	0	0	0	0	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
g0015	0/0	4	0	0	4	0	0	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
g0016	0/0	4	1	0	3	0	0	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
g0017	0/0	4	0	0	4	0	0	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
g0018	0/0	4	3	0	0	0	1	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
g0019	0/0	3	3	0	0	0	0	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
g0020	0/0	3	3	0	0	0	0	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
g0021	0/0	3	3	0	0	0	0	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
g0022	0/0	3	0	0	0	1	2	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
g0023	0/0	3	0	0	2	0	1	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
g0024	0/0	2	0	0	1	1	0	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
g0025	0/0	2	0	0	2	0	0	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
g0026	0/0	2	2	0	0	0	0	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
g0027	0/0	2	0	0	2	0	0	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
g0028	0/0	2	0	0	2	0	0	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
g0029	0/0	2	0	0	2	0	0	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
g0030	0/0	2	0	0	2	0	0	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
g0031	0/0	2	0	0	0	0	2	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
g0032	0/0	2	0	0	2	0	0	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
g0033	0/0	2	1	0	1	0	0	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
g0034	0/0	2	0	1	0	0	1	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
g0035	0/0	2	0	2	0	0	0	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
g0036	0/0	1	1	0	0	0	0	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
g0037	0/0	1	1	0	0	0	0	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
g0038	0/0	1	1	0	0	0	0	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
g0039	0/0	1	1	0	0	0	0	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
g0040	0/0	1	1	0	0	0	0	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
g0041	0/0	1	0	0	0	0	1	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
g0042	0/0	1	1	0	0	0	0	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
g0043	0/0	1	1	0	0	0	0	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
g0044	0/0	1	1	0	0	0	0	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
g0045	0/0	1	0	0	1	0	0	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
g0046	0/0	1	0	1	0	0	0	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
g0047	0/0	1	0	1	0	0	0	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
g0048	0/0	1	0	1	0	0	0	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
g0049	0/0	1	1	0	0	0	0	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
g0050	0/0	1	1	0	0	0	0	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
g0051	0/0	1	1	0	0	0	0	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
g0052	0/0	1	1	0	0	0	0	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
g0053	0/0	1	0	0	0	0	1	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
g0054	0/0	1	1	0	0	0	0	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
g0055	0/0	1	1	0	0	0	0	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
g0056	0/0	1	0	1	0	0	0	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
g0057	0/0	1	0	1	0	0	0	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
g0058	0/0	1	0	0	0	0	1	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
g0059	0/0	1	0	0	0	0	1	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
g0060	0/0	1	0	1	0	0	0	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
g0061	0/0	1	1	0	0	0	0	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
g0062	0/0	1	0	0	1	0	0	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
g0063	0/0	1	1	0	0	0	0	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
g0064	0/0	1	0	0	0	0	1	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
g0065	0/0	1	0	1	0	0	0	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
g0066	0/0	1	0	0	1	0	0	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
g0067	0/0	1	0	0	1	0	0	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
g0068	0/0	1	0	1	0	0	0	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
g0069	0/0	1	0	0	1	0	0	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
g0070	0/0	1	0	0	1	0	0	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
g0071	0/0	1	0	0	1	0	0	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
g0072	0/0	1	0	0	1	0	0	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
g0073	0/0	1	0	0	0	1	0	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
g0074	0/0	1	0	1	0	0	0	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
g0075	1/0	1	0	0	0	0	0	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
g0076	0/0	1	0	0	1	0	0	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
g0077	0/0	1	0	0	1	0	0	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
g0078	0/0	1	0	0	1	0	0	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
g0079	0/0	1	0	0	1	0	0	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
g0080	0/0	1	0	0	1	0	0	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
g0081	0/0	1	0	0	0	0	1	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
g0082	0/0	1	1	0	0	0	0	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
g0083	0/0	1	0	0	0	1	0	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
g0084	0/0	1	0	0	0	0	1	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
g0085	0/0	1	0	1	0	0	0	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
g0086	0/0	1	1	0	0	0	0	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
g0087	0/0	1	0	0	0	0	1	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
g0088	0/0	1	0	0	1	0	0	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
g0089	0/0	1	0	0	0	0	1	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
g0090	0/0	1	1	0	0	0	0	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
g0091	0/0	1	1	0	0	0	0	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
g0092	0/0	1	1	0	0	0	0	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
g0093	0/0	1	1	0	0	0	0	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
g0094	0/0	1	1	0	0	0	0	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
g0095	0/0	1	1	0	0	0	0	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
g0096	0/0	1	1	0	0	0	0	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282

achapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	clen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	cseq	chr	start	end
a0001c0001	1/1	1353	269	78	56	90	12	31	BECN1_chr17_42805134_42829282	BECN1	copy fasta	chr17	42805134	42829282
a0001c0002	0/0	1353	3	3	0	0	0	0	BECN1_chr17_42805134_42829282	BECN1	copy fasta	chr17	42805134	42829282
a0001c0004	0/0	1353	1	1	0	0	0	0	BECN1_chr17_42805134_42829282	BECN1	copy fasta	chr17	42805134	42829282
a0002c0003	0/0	1353	1	0	0	0	0	1	BECN1_chr17_42805134_42829282	BECN1	copy fasta	chr17	42805134	42829282

acthapid	grch38 chm13v2	tlen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	tseq	chr	start	end
a0001c0001t0001	1/1	2109	197	73	50	40	8	24	BECN1_chr17_42805134_42829282	BECN1	copy fasta	chr17	42805134	42829282
a0001c0001t0002	0/0	2109	51	1	6	37	4	3	BECN1_chr17_42805134_42829282	BECN1	copy fasta	chr17	42805134	42829282
a0001c0001t0003	0/0	2109	13	2	0	7	0	4	BECN1_chr17_42805134_42829282	BECN1	copy fasta	chr17	42805134	42829282
a0001c0001t0004	0/0	2109	4	0	0	4	0	0	BECN1_chr17_42805134_42829282	BECN1	copy fasta	chr17	42805134	42829282
a0001c0001t0005	0/0	2109	2	0	0	2	0	0	BECN1_chr17_42805134_42829282	BECN1	copy fasta	chr17	42805134	42829282
a0001c0001t0006	0/0	2109	2	2	0	0	0	0	BECN1_chr17_42805134_42829282	BECN1	copy fasta	chr17	42805134	42829282
a0001c0002t0001	0/0	2109	3	3	0	0	0	0	BECN1_chr17_42805134_42829282	BECN1	copy fasta	chr17	42805134	42829282
a0001c0004t0001	0/0	2109	1	1	0	0	0	0	BECN1_chr17_42805134_42829282	BECN1	copy fasta	chr17	42805134	42829282
a0002c0003t0002	0/0	2109	1	0	0	0	0	1	BECN1_chr17_42805134_42829282	BECN1	copy fasta	chr17	42805134	42829282

actghapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	chr	start	end
a0001c0001t0001g0001	0/1	47	12	13	16	1	4	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
a0001c0001t0001g0003	0/0	14	4	1	5	0	4	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
a0001c0001t0001g0004	0/0	12	0	6	1	3	2	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
a0001c0001t0001g0005	0/0	11	10	0	0	0	1	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
a0001c0001t0001g0007	0/0	6	0	6	0	0	0	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
a0001c0001t0001g0009	0/0	6	0	3	2	0	1	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
a0001c0001t0001g0010	0/0	6	6	0	0	0	0	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
a0001c0001t0001g0011	0/0	6	0	5	1	0	0	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
a0001c0001t0001g0012	0/0	5	4	1	0	0	0	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
a0001c0001t0001g0013	0/0	5	0	3	1	0	1	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
a0001c0001t0001g0014	0/0	4	4	0	0	0	0	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
a0001c0001t0001g0016	0/0	4	1	0	3	0	0	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
a0001c0001t0001g0018	0/0	4	3	0	0	0	1	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
a0001c0001t0001g0019	0/0	3	3	0	0	0	0	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
a0001c0001t0001g0020	0/0	3	3	0	0	0	0	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
a0001c0001t0001g0022	0/0	3	0	0	0	1	2	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
a0001c0001t0001g0024	0/0	2	0	0	1	1	0	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
a0001c0001t0001g0025	0/0	2	0	0	2	0	0	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
a0001c0001t0001g0026	0/0	2	2	0	0	0	0	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
a0001c0001t0001g0027	0/0	2	0	0	2	0	0	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
a0001c0001t0001g0031	0/0	2	0	0	0	0	2	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
a0001c0001t0001g0033	0/0	2	1	0	1	0	0	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
a0001c0001t0001g0034	0/0	2	0	1	0	0	1	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
a0001c0001t0001g0035	0/0	2	0	2	0	0	0	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
a0001c0001t0001g0036	0/0	1	1	0	0	0	0	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
a0001c0001t0001g0037	0/0	1	1	0	0	0	0	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
a0001c0001t0001g0038	0/0	1	1	0	0	0	0	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
a0001c0001t0001g0039	0/0	1	1	0	0	0	0	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
a0001c0001t0001g0040	0/0	1	1	0	0	0	0	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
a0001c0001t0001g0041	0/0	1	0	0	0	0	1	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
a0001c0001t0001g0042	0/0	1	1	0	0	0	0	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
a0001c0001t0001g0043	0/0	1	1	0	0	0	0	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
a0001c0001t0001g0044	0/0	1	1	0	0	0	0	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
a0001c0001t0001g0046	0/0	1	0	1	0	0	0	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
a0001c0001t0001g0047	0/0	1	0	1	0	0	0	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
a0001c0001t0001g0048	0/0	1	0	1	0	0	0	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
a0001c0001t0001g0049	0/0	1	1	0	0	0	0	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
a0001c0001t0001g0050	0/0	1	1	0	0	0	0	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
a0001c0001t0001g0051	0/0	1	1	0	0	0	0	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
a0001c0001t0001g0052	0/0	1	1	0	0	0	0	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
a0001c0001t0001g0054	0/0	1	1	0	0	0	0	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
a0001c0001t0001g0055	0/0	1	1	0	0	0	0	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
a0001c0001t0001g0056	0/0	1	0	1	0	0	0	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
a0001c0001t0001g0057	0/0	1	0	1	0	0	0	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
a0001c0001t0001g0059	0/0	1	0	0	0	0	1	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
a0001c0001t0001g0060	0/0	1	0	1	0	0	0	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
a0001c0001t0001g0061	0/0	1	1	0	0	0	0	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
a0001c0001t0001g0063	0/0	1	1	0	0	0	0	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
a0001c0001t0001g0064	0/0	1	0	0	0	0	1	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
a0001c0001t0001g0065	0/0	1	0	1	0	0	0	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
a0001c0001t0001g0067	0/0	1	0	0	1	0	0	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
a0001c0001t0001g0068	0/0	1	0	1	0	0	0	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
a0001c0001t0001g0069	0/0	1	0	0	1	0	0	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
a0001c0001t0001g0071	0/0	1	0	0	1	0	0	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
a0001c0001t0001g0073	0/0	1	0	0	0	1	0	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
a0001c0001t0001g0074	0/0	1	0	1	0	0	0	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
a0001c0001t0001g0075	1/0	1	0	0	0	0	0	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
a0001c0001t0001g0076	0/0	1	0	0	1	0	0	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
a0001c0001t0001g0080	0/0	1	0	0	1	0	0	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
a0001c0001t0001g0083	0/0	1	0	0	0	1	0	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
a0001c0001t0001g0084	0/0	1	0	0	0	0	1	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
a0001c0001t0001g0086	0/0	1	1	0	0	0	0	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
a0001c0001t0001g0087	0/0	1	0	0	0	0	1	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
a0001c0001t0001g0092	0/0	1	1	0	0	0	0	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
a0001c0001t0001g0093	0/0	1	1	0	0	0	0	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
a0001c0001t0001g0094	0/0	1	1	0	0	0	0	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
a0001c0001t0002g0002	0/0	23	1	4	13	4	1	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
a0001c0001t0002g0008	0/0	6	0	1	5	0	0	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
a0001c0001t0002g0015	0/0	4	0	0	4	0	0	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
a0001c0001t0002g0017	0/0	4	0	0	4	0	0	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
a0001c0001t0002g0029	0/0	2	0	0	2	0	0	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
a0001c0001t0002g0045	0/0	1	0	0	1	0	0	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
a0001c0001t0002g0058	0/0	1	0	0	0	0	1	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
a0001c0001t0002g0062	0/0	1	0	0	1	0	0	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
a0001c0001t0002g0066	0/0	1	0	0	1	0	0	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
a0001c0001t0002g0070	0/0	1	0	0	1	0	0	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
a0001c0001t0002g0072	0/0	1	0	0	1	0	0	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
a0001c0001t0002g0077	0/0	1	0	0	1	0	0	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
a0001c0001t0002g0078	0/0	1	0	0	1	0	0	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
a0001c0001t0002g0079	0/0	1	0	0	1	0	0	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
a0001c0001t0002g0081	0/0	1	0	0	0	0	1	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
a0001c0001t0002g0085	0/0	1	0	1	0	0	0	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
a0001c0001t0002g0088	0/0	1	0	0	1	0	0	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
a0001c0001t0003g0006	0/0	7	0	0	5	0	2	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
a0001c0001t0003g0023	0/0	3	0	0	2	0	1	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
a0001c0001t0003g0089	0/0	1	0	0	0	0	1	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
a0001c0001t0003g0090	0/0	1	1	0	0	0	0	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
a0001c0001t0003g0091	0/0	1	1	0	0	0	0	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
a0001c0001t0004g0030	0/0	2	0	0	2	0	0	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
a0001c0001t0004g0032	0/0	2	0	0	2	0	0	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
a0001c0001t0005g0028	0/0	2	0	0	2	0	0	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
a0001c0001t0006g0095	0/0	1	1	0	0	0	0	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
a0001c0001t0006g0096	0/0	1	1	0	0	0	0	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
a0001c0002t0001g0021	0/0	3	3	0	0	0	0	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
a0001c0004t0001g0082	0/0	1	1	0	0	0	0	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
a0002c0003t0002g0053	0/0	1	0	0	0	0	1	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282

sampleid	ID haplotypeid	ahapid	chapid	thapid	ghapid	gpopname	popname	regionname	genename	chr	start	end
HG00099	hp1	a0001	c0001	t0002	g0002	EUR	GBR	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
HG00099	hp2	a0001	c0001	t0001	g0001	EUR	GBR	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
HG00140	hp1	a0001	c0001	t0002	g0002	EUR	GBR	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
HG00140	hp2	a0001	c0001	t0001	g0004	EUR	GBR	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
HG00280	hp1	a0001	c0001	t0001	g0022	EUR	FIN	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
HG00280	hp2	a0001	c0001	t0001	g0073	EUR	FIN	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
HG00323	hp1	a0001	c0001	t0001	g0083	EUR	FIN	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
HG00323	hp2	a0001	c0001	t0001	g0024	EUR	FIN	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
HG00408	hp1	a0001	c0001	t0001	g0003	EAS	CHS	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
HG00408	hp2	a0001	c0001	t0002	g0017	EAS	CHS	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
HG00423	hp1	a0001	c0001	t0001	g0076	EAS	CHS	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
HG00423	hp2	a0001	c0001	t0002	g0002	EAS	CHS	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
HG00438	hp1	a0001	c0001	t0001	g0001	EAS	CHS	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
HG00438	hp2	a0001	c0001	t0001	g0027	EAS	CHS	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
HG00544	hp1	a0001	c0001	t0001	g0001	EAS	CHS	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
HG00544	hp2	a0001	c0001	t0001	g0016	EAS	CHS	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
HG00597	hp1	a0001	c0001	t0001	g0003	EAS	CHS	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
HG00597	hp2	a0001	c0001	t0001	g0004	EAS	CHS	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
HG00609	hp1	a0001	c0001	t0001	g0001	EAS	CHS	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
HG00609	hp2	a0001	c0001	t0002	g0029	EAS	CHS	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
HG00621	hp1	a0001	c0001	t0002	g0088	EAS	CHS	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
HG00621	hp2	a0001	c0001	t0001	g0067	EAS	CHS	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
HG00639	hp1	a0001	c0001	t0001	g0004	AMR	PUR	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
HG00639	hp2	a0001	c0001	t0001	g0001	AMR	PUR	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
HG00642	hp1	a0001	c0001	t0001	g0001	AMR	PUR	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
HG00642	hp2	a0001	c0001	t0002	g0002	AMR	PUR	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
HG00673	hp1	a0001	c0001	t0002	g0002	EAS	CHS	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
HG00673	hp2	a0001	c0001	t0001	g0001	EAS	CHS	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
HG00735	hp1	a0001	c0001	t0001	g0001	AMR	PUR	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
HG00735	hp2	a0001	c0001	t0001	g0001	AMR	PUR	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
HG00741	hp1	a0001	c0001	t0001	g0004	AMR	PUR	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
HG00741	hp2	a0001	c0001	t0002	g0008	AMR	PUR	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
HG01070	hp1	a0001	c0001	t0001	g0001	AMR	PUR	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
HG01070	hp2	a0001	c0001	t0001	g0011	AMR	PUR	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
HG01074	hp1	a0001	c0001	t0001	g0001	AMR	PUR	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
HG01074	hp2	a0001	c0001	t0001	g0004	AMR	PUR	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
HG01081	hp1	a0001	c0001	t0001	g0001	AMR	PUR	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
HG01081	hp2	a0001	c0001	t0001	g0074	AMR	PUR	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
HG01099	hp1	a0001	c0001	t0001	g0009	AMR	PUR	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
HG01099	hp2	a0001	c0001	t0001	g0009	AMR	PUR	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
HG01106	hp1	a0001	c0001	t0001	g0013	AMR	PUR	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
HG01106	hp2	a0001	c0001	t0001	g0068	AMR	PUR	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
HG01109	hp1	a0001	c0001	t0001	g0007	AMR	PUR	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
HG01109	hp2	a0001	c0001	t0001	g0012	AMR	PUR	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
HG01169	hp1	a0001	c0001	t0001	g0057	AMR	PUR	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
HG01169	hp2	a0001	c0001	t0001	g0056	AMR	PUR	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
HG01175	hp1	a0001	c0001	t0001	g0011	AMR	PUR	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
HG01175	hp2	a0001	c0001	t0001	g0060	AMR	PUR	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
HG01243	hp1	a0001	c0001	t0001	g0065	AMR	PUR	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
HG01243	hp2	a0001	c0001	t0001	g0009	AMR	PUR	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
HG01255	hp1	a0001	c0001	t0001	g0011	AMR	CLM	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
HG01255	hp2	a0001	c0001	t0001	g0001	AMR	CLM	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
HG01261	hp1	a0001	c0001	t0001	g0048	AMR	CLM	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
HG01261	hp2	a0001	c0001	t0001	g0001	AMR	CLM	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
HG01346	hp1	a0001	c0001	t0002	g0002	AMR	CLM	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
HG01346	hp2	a0001	c0001	t0001	g0004	AMR	CLM	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
HG01361	hp1	a0001	c0001	t0001	g0001	AMR	CLM	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
HG01361	hp2	a0001	c0001	t0001	g0007	AMR	CLM	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
HG01433	hp1	a0001	c0001	t0001	g0004	AMR	CLM	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
HG01433	hp2	a0001	c0001	t0001	g0001	AMR	CLM	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
HG01496	hp1	a0001	c0001	t0001	g0047	AMR	CLM	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
HG01496	hp2	a0001	c0001	t0001	g0001	AMR	CLM	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
HG01516	hp1	a0001	c0001	t0001	g0004	EUR	IBS	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
HG01516	hp2	a0001	c0001	t0002	g0002	EUR	IBS	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
HG01517	hp1	a0001	c0001	t0002	g0002	EUR	IBS	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
HG01517	hp2	a0001	c0001	t0001	g0004	EUR	IBS	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
HG01891	hp1	a0001	c0001	t0001	g0001	AFR	ACB	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
HG01891	hp2	a0001	c0001	t0001	g0010	AFR	ACB	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
HG01934	hp1	a0001	c0001	t0002	g0002	AMR	PEL	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
HG01934	hp2	a0001	c0001	t0001	g0013	AMR	PEL	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
HG01943	hp1	a0001	c0001	t0001	g0007	AMR	PEL	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
HG01943	hp2	a0001	c0001	t0001	g0034	AMR	PEL	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
HG01975	hp1	a0001	c0001	t0001	g0035	AMR	PEL	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
HG01975	hp2	a0001	c0001	t0001	g0011	AMR	PEL	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
HG01978	hp1	a0001	c0001	t0001	g0013	AMR	PEL	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
HG01978	hp2	a0001	c0001	t0001	g0046	AMR	PEL	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
HG01981	hp1	a0001	c0001	t0001	g0035	AMR	PEL	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
HG01981	hp2	a0001	c0001	t0002	g0085	AMR	PEL	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
HG02004	hp1	a0001	c0001	t0001	g0007	AMR	PEL	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
HG02004	hp2	a0001	c0001	t0001	g0004	AMR	PEL	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
HG02015	hp1	a0001	c0001	t0001	g0033	EAS	KHV	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
HG02015	hp2	a0001	c0001	t0001	g0003	EAS	KHV	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
HG02040	hp1	a0001	c0001	t0002	g0002	EAS	KHV	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
HG02040	hp2	a0001	c0001	t0002	g0072	EAS	KHV	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
HG02055	hp1	a0001	c0001	t0001	g0092	AFR	ACB	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
HG02055	hp2	a0001	c0001	t0001	g0049	AFR	ACB	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
HG02080	hp1	a0001	c0001	t0001	g0016	EAS	KHV	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
HG02080	hp2	a0001	c0001	t0001	g0011	EAS	KHV	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
HG02083	hp1	a0001	c0001	t0002	g0008	EAS	KHV	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
HG02083	hp2	a0001	c0001	t0002	g0008	EAS	KHV	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
HG02132	hp1	a0001	c0001	t0001	g0071	EAS	KHV	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
HG02132	hp2	a0001	c0001	t0003	g0006	EAS	KHV	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
HG02135	hp1	a0001	c0001	t0002	g0002	EAS	KHV	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
HG02135	hp2	a0001	c0001	t0001	g0009	EAS	KHV	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
HG02145	hp1	a0001	c0001	t0003	g0090	AFR	ACB	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
HG02145	hp2	a0001	c0001	t0001	g0014	AFR	ACB	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
HG02165	hp1	a0001	c0001	t0002	g0002	EAS	CDX	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
HG02165	hp2	a0001	c0001	t0001	g0080	EAS	CDX	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
HG02257	hp1	a0001	c0001	t0001	g0005	AFR	ACB	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
HG02257	hp2	a0001	c0001	t0002	g0002	AFR	ACB	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
HG02258	hp1	a0001	c0001	t0001	g0001	AFR	ACB	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
HG02258	hp2	a0001	c0001	t0001	g0063	AFR	ACB	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
HG02273	hp1	a0001	c0001	t0001	g0007	AMR	PEL	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
HG02273	hp2	a0001	c0001	t0002	g0002	AMR	PEL	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
HG02280	hp1	a0001	c0001	t0001	g0014	AFR	ACB	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
HG02280	hp2	a0001	c0001	t0001	g0001	AFR	ACB	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
HG02293	hp1	a0001	c0001	t0001	g0007	AMR	PEL	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
HG02293	hp2	a0001	c0001	t0001	g0001	AMR	PEL	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
HG02300	hp1	a0001	c0001	t0001	g0011	AMR	PEL	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
HG02300	hp2	a0001	c0001	t0001	g0003	AMR	PEL	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
HG02451	hp1	a0001	c0001	t0001	g0051	AFR	ACB	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
HG02451	hp2	a0001	c0001	t0001	g0003	AFR	ACB	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
HG02523	hp1	a0001	c0001	t0002	g0002	EAS	KHV	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
HG02523	hp2	a0001	c0001	t0001	g0001	EAS	KHV	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
HG02572	hp1	a0001	c0001	t0001	g0012	AFR	GWD	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
HG02572	hp2	a0001	c0001	t0001	g0026	AFR	GWD	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
HG02602	hp1	a0001	c0001	t0001	g0001	SAS	PJL	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
HG02602	hp2	a0001	c0001	t0001	g0064	SAS	PJL	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
HG02622	hp1	a0001	c0001	t0001	g0005	AFR	GWD	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
HG02622	hp2	a0001	c0001	t0001	g0005	AFR	GWD	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
HG02630	hp1	a0001	c0001	t0001	g0005	AFR	GWD	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
HG02630	hp2	a0001	c0001	t0001	g0019	AFR	GWD	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
HG02717	hp1	a0001	c0001	t0001	g0026	AFR	GWD	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
HG02717	hp2	a0001	c0001	t0001	g0014	AFR	GWD	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
HG02723	hp1	a0001	c0001	t0001	g0003	AFR	GWD	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
HG02723	hp2	a0001	c0001	t0001	g0010	AFR	GWD	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
HG02735	hp1	a0001	c0001	t0001	g0001	SAS	PJL	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
HG02735	hp2	a0001	c0001	t0001	g0003	SAS	PJL	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
HG02809	hp1	a0001	c0001	t0001	g0020	AFR	GWD	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
HG02809	hp2	a0001	c0001	t0001	g0040	AFR	GWD	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
HG02818	hp1	a0001	c0001	t0001	g0052	AFR	GWD	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
HG02818	hp2	a0001	c0001	t0001	g0001	AFR	GWD	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
HG02886	hp1	a0001	c0001	t0001	g0037	AFR	GWD	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
HG02886	hp2	a0001	c0001	t0001	g0061	AFR	GWD	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
HG02895	hp1	a0001	c0001	t0001	g0010	AFR	GWD	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
HG02895	hp2	a0001	c0001	t0001	g0003	AFR	GWD	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
HG02896	hp1	a0001	c0001	t0001	g0055	AFR	GWD	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
HG02896	hp2	a0001	c0001	t0001	g0010	AFR	GWD	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
HG02965	hp1	a0001	c0001	t0001	g0005	AFR	ESN	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
HG02965	hp2	a0001	c0001	t0001	g0005	AFR	ESN	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
HG02970	hp1	a0001	c0001	t0001	g0016	AFR	ESN	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
HG02970	hp2	a0001	c0001	t0001	g0033	AFR	ESN	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
HG02976	hp1	a0001	c0002	t0001	g0021	AFR	ESN	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
HG02976	hp2	a0001	c0001	t0001	g0018	AFR	ESN	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
HG03017	hp1	a0001	c0001	t0001	g0003	SAS	PJL	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
HG03017	hp2	a0001	c0001	t0001	g0084	SAS	PJL	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
HG03041	hp1	a0001	c0001	t0001	g0012	AFR	GWD	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
HG03041	hp2	a0001	c0004	t0001	g0082	AFR	GWD	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
HG03098	hp1	a0001	c0001	t0001	g0018	AFR	MSL	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
HG03098	hp2	a0001	c0001	t0001	g0043	AFR	MSL	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
HG03130	hp1	a0001	c0001	t0001	g0001	AFR	ESN	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
HG03130	hp2	a0001	c0001	t0006	g0096	AFR	ESN	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
HG03139	hp1	a0001	c0001	t0001	g0044	AFR	ESN	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
HG03139	hp2	a0001	c0001	t0001	g0001	AFR	ESN	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
HG03195	hp1	a0001	c0001	t0001	g0010	AFR	ESN	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
HG03195	hp2	a0001	c0001	t0001	g0014	AFR	ESN	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
HG03209	hp1	a0001	c0001	t0001	g0038	AFR	MSL	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
HG03209	hp2	a0001	c0001	t0001	g0094	AFR	MSL	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
HG03225	hp1	a0001	c0001	t0001	g0005	AFR	MSL	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
HG03225	hp2	a0001	c0001	t0001	g0012	AFR	MSL	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
HG03239	hp1	a0001	c0001	t0001	g0001	SAS	PJL	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
HG03239	hp2	a0001	c0001	t0001	g0022	SAS	PJL	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
HG03486	hp1	a0001	c0001	t0001	g0054	AFR	MSL	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
HG03486	hp2	a0001	c0001	t0001	g0039	AFR	MSL	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
HG03516	hp1	a0001	c0001	t0001	g0019	AFR	ESN	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
HG03516	hp2	a0001	c0001	t0001	g0050	AFR	ESN	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
HG03540	hp1	a0001	c0002	t0001	g0021	AFR	GWD	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
HG03540	hp2	a0001	c0001	t0001	g0001	AFR	GWD	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
HG03579	hp1	a0001	c0001	t0001	g0001	AFR	MSL	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
HG03579	hp2	a0001	c0001	t0001	g0012	AFR	MSL	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
HG03654	hp1	a0001	c0001	t0001	g0003	SAS	PJL	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
HG03654	hp2	a0001	c0001	t0001	g0041	SAS	PJL	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
HG03688	hp1	a0001	c0001	t0001	g0018	SAS	STU	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
HG03688	hp2	a0001	c0001	t0002	g0081	SAS	STU	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
HG03704	hp1	a0001	c0001	t0001	g0001	SAS	PJL	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
HG03704	hp2	a0001	c0001	t0003	g0006	SAS	PJL	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
HG03710	hp1	a0001	c0001	t0001	g0004	SAS	PJL	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
HG03710	hp2	a0001	c0001	t0001	g0022	SAS	PJL	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
HG03831	hp1	a0001	c0001	t0003	g0089	SAS	BEB	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
HG03831	hp2	a0001	c0001	t0001	g0031	SAS	BEB	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
HG03834	hp1	a0001	c0001	t0001	g0034	SAS	BEB	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
HG03834	hp2	a0001	c0001	t0002	g0058	SAS	BEB	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
HG03927	hp1	a0001	c0001	t0003	g0023	SAS	BEB	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
HG03927	hp2	a0001	c0001	t0001	g0059	SAS	BEB	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
HG04115	hp1	a0001	c0001	t0001	g0009	SAS	STU	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
HG04115	hp2	a0002	c0003	t0002	g0053	SAS	STU	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
HG04199	hp1	a0001	c0001	t0001	g0004	SAS	STU	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
HG04199	hp2	a0001	c0001	t0001	g0087	SAS	STU	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
HG04204	hp1	a0001	c0001	t0001	g0013	SAS	STU	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
HG04204	hp2	a0001	c0001	t0001	g0005	SAS	STU	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
HG04228	hp1	a0001	c0001	t0001	g0031	SAS	STU	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
HG04228	hp2	a0001	c0001	t0003	g0006	SAS	STU	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
NA18522	hp1	a0001	c0001	t0006	g0095	AFR	YRI	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
NA18522	hp2	a0001	c0001	t0001	g0005	AFR	YRI	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
NA18906	hp1	a0001	c0001	t0001	g0001	AFR	YRI	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
NA18906	hp2	a0001	c0001	t0001	g0019	AFR	YRI	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
NA18939	hp1	a0001	c0001	t0002	g0002	EAS	JPT	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
NA18939	hp2	a0001	c0001	t0001	g0001	EAS	JPT	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
NA18943	hp1	a0001	c0001	t0002	g0008	EAS	JPT	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
NA18943	hp2	a0001	c0001	t0002	g0015	EAS	JPT	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
NA18948	hp1	a0001	c0001	t0003	g0006	EAS	JPT	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
NA18948	hp2	a0001	c0001	t0001	g0001	EAS	JPT	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
NA18953	hp1	a0001	c0001	t0001	g0001	EAS	JPT	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
NA18953	hp2	a0001	c0001	t0004	g0032	EAS	JPT	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
NA18956	hp1	a0001	c0001	t0002	g0066	EAS	JPT	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
NA18956	hp2	a0001	c0001	t0001	g0013	EAS	JPT	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
NA18963	hp1	a0001	c0001	t0001	g0001	EAS	JPT	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
NA18963	hp2	a0001	c0001	t0003	g0023	EAS	JPT	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
NA18966	hp1	a0001	c0001	t0001	g0025	EAS	JPT	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
NA18966	hp2	a0001	c0001	t0002	g0002	EAS	JPT	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
NA18973	hp1	a0001	c0001	t0001	g0024	EAS	JPT	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
NA18973	hp2	a0001	c0001	t0001	g0027	EAS	JPT	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
NA18974	hp1	a0001	c0001	t0002	g0078	EAS	JPT	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
NA18974	hp2	a0001	c0001	t0001	g0009	EAS	JPT	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
NA18977	hp1	a0001	c0001	t0003	g0006	EAS	JPT	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
NA18977	hp2	a0001	c0001	t0002	g0015	EAS	JPT	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
NA18989	hp1	a0001	c0001	t0003	g0006	EAS	JPT	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
NA18989	hp2	a0001	c0001	t0005	g0028	EAS	JPT	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
NA18994	hp1	a0001	c0001	t0001	g0001	EAS	JPT	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
NA18994	hp2	a0001	c0001	t0005	g0028	EAS	JPT	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
NA18999	hp1	a0001	c0001	t0002	g0079	EAS	JPT	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
NA18999	hp2	a0001	c0001	t0002	g0077	EAS	JPT	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
NA19000	hp1	a0001	c0001	t0002	g0015	EAS	JPT	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
NA19000	hp2	a0001	c0001	t0004	g0030	EAS	JPT	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
NA19002	hp1	a0001	c0001	t0002	g0008	EAS	JPT	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
NA19002	hp2	a0001	c0001	t0001	g0001	EAS	JPT	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
NA19005	hp1	a0001	c0001	t0001	g0001	EAS	JPT	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
NA19005	hp2	a0001	c0001	t0002	g0002	EAS	JPT	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
NA19009	hp1	a0001	c0001	t0004	g0032	EAS	JPT	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
NA19009	hp2	a0001	c0001	t0001	g0001	EAS	JPT	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
NA19010	hp1	a0001	c0001	t0003	g0006	EAS	JPT	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
NA19010	hp2	a0001	c0001	t0001	g0001	EAS	JPT	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
NA19030	hp1	a0001	c0001	t0001	g0010	AFR	LWK	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
NA19030	hp2	a0001	c0001	t0001	g0093	AFR	LWK	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
NA19043	hp1	a0001	c0001	t0001	g0001	AFR	LWK	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
NA19043	hp2	a0001	c0001	t0001	g0036	AFR	LWK	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
NA19054	hp1	a0001	c0001	t0002	g0045	EAS	JPT	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
NA19054	hp2	a0001	c0001	t0002	g0070	EAS	JPT	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
NA19060	hp1	a0001	c0001	t0002	g0029	EAS	JPT	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
NA19060	hp2	a0001	c0001	t0001	g0025	EAS	JPT	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
NA19062	hp1	a0001	c0001	t0002	g0002	EAS	JPT	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
NA19062	hp2	a0001	c0001	t0001	g0016	EAS	JPT	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
NA19064	hp1	a0001	c0001	t0001	g0001	EAS	JPT	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
NA19064	hp2	a0001	c0001	t0002	g0002	EAS	JPT	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
NA19067	hp1	a0001	c0001	t0002	g0002	EAS	JPT	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
NA19067	hp2	a0001	c0001	t0002	g0017	EAS	JPT	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
NA19068	hp1	a0001	c0001	t0002	g0017	EAS	JPT	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
NA19068	hp2	a0001	c0001	t0001	g0001	EAS	JPT	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
NA19077	hp1	a0001	c0001	t0002	g0015	EAS	JPT	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
NA19077	hp2	a0001	c0001	t0004	g0030	EAS	JPT	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
NA19081	hp1	a0001	c0001	t0002	g0017	EAS	JPT	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
NA19081	hp2	a0001	c0001	t0001	g0069	EAS	JPT	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
NA19084	hp1	a0001	c0001	t0002	g0002	EAS	JPT	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
NA19084	hp2	a0001	c0001	t0001	g0003	EAS	JPT	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
NA19087	hp1	a0001	c0001	t0003	g0023	EAS	JPT	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
NA19087	hp2	a0001	c0001	t0002	g0008	EAS	JPT	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
NA19091	hp1	a0001	c0001	t0001	g0003	EAS	JPT	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
NA19091	hp2	a0001	c0001	t0002	g0062	EAS	JPT	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
NA19240	hp1	a0001	c0001	t0001	g0005	AFR	YRI	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
NA19240	hp2	a0001	c0001	t0001	g0020	AFR	YRI	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
NA20905	hp1	a0001	c0001	t0001	g0003	SAS	GIH	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
NA20905	hp2	a0001	c0001	t0002	g0002	SAS	GIH	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
HG02486	hp1	a0001	c0001	t0003	g0091	AFR	ACB	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
HG02486	hp2	a0001	c0001	t0001	g0003	AFR	ACB	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
HG02559	hp1	a0001	c0001	t0001	g0005	AFR	ACB	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
HG02559	hp2	a0001	c0001	t0001	g0001	AFR	ACB	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
HG03471	hp1	a0001	c0001	t0001	g0042	AFR	MSL	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
HG03471	hp2	a0001	c0001	t0001	g0001	AFR	MSL	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
HG06807	hp1	a0001	c0002	t0001	g0021	AFR	USA	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
HG06807	hp2	a0001	c0001	t0001	g0020	AFR	USA	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
NA21309	hp1	a0001	c0001	t0001	g0086	AFR	LWK	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
NA21309	hp2	a0001	c0001	t0001	g0018	AFR	LWK	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
homoSapiens_chm13v2	hp1	a0001	c0001	t0001	g0001	REF	REF	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282
homoSapiens_grch38	hp1	a0001	c0001	t0001	g0075	REF	REF	BECN1_chr17_42805134_42829282	BECN1	chr17	42805134	42829282

chr:pos	ref	alt	# # of ahapid:amino-acid(protein) level	ahapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	hgvs_p	genename	geneid	featuretype	featureid	transcript_biotype	rank	cdna cdna pos length	cds cds pos length	aa aa pos length	distance	status	chr	pos
chr17:42818246	C C	T T	1	a0002 a0002	1	HG04115.hp2 HG04115.hp2	missense_variant	MODERATE	c.658G>A c.658G>A	p.Glu220Lys p.Glu220Lys	BECN1	ENSG00000126581.13	transcript	ENST00000590099.6	protein_coding	7/12	788/2109	658/1353	220/450			chr17	42818246

chr:pos	ref	alt	# # of chapid	chapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	hgvs_p	genename	geneid	featuretype	featureid	transcript_biotype	rank	cdna cdna pos length	cds cds pos length	aa aa pos length	distance	status	chr	pos
chr17:42818223	A A	T T	1	a0001c0002 a0001c0002	3	HG02976.hp1 HG03540.hp1 HG06807.hp1 HG02976.hp1 HG03540.hp1 HG06807.hp1	splice_region_variant&synonymous_variant	LOW	c.681T>A c.681T>A	p.Ala227Ala p.Ala227Ala	BECN1	ENSG00000126581.13	transcript	ENST00000590099.6	protein_coding	7/12	811/2109	681/1353	227/450			chr17	42818223
chr17:42818391	T T	C C	1	a0001c0004 a0001c0004	1	HG03041.hp2 HG03041.hp2	synonymous_variant	LOW	c.513A>G c.513A>G	p.Gln171Gln p.Gln171Gln	BECN1	ENSG00000126581.13	transcript	ENST00000590099.6	protein_coding	7/12	643/2109	513/1353	171/450			chr17	42818391

chr:pos	ref	alt	# # of thapid:transcript level	thapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	chr	pos
chr17:42810317	T T	C C	1	a0001c0001t0004 a0001c0001t0004	4	NA18953.hp2 NA19000.hp2 NA19009.hp1 others(1): Show NA18953.hp2 NA19000.hp2 NA19009.hp1 NA19077.hp2	3_prime_UTR_variant	MODIFIER	c.443A>G c.443A>G	BECN1	ENSG00000126581.13	transcript	ENST00000590099.6	protein_coding	12/12	443	chr17	42810317
chr17:42810414	A A	G G	1	a0001c0001t0005 a0001c0001t0005	2	NA18989.hp2 NA18994.hp2 NA18989.hp2 NA18994.hp2	3_prime_UTR_variant	MODIFIER	c.346T>C c.346T>C	BECN1	ENSG00000126581.13	transcript	ENST00000590099.6	protein_coding	12/12	346	chr17	42810414
chr17:42810491	A A	T T	3	a0001c0001t0002 a0001c0001t0005 a0002c0003t0002 a0001c0001t0002 a0001c0001t0005 a0002c0003t0002	54	HG00099.hp1 HG00140.hp1 HG00408.hp2 others(51): Show HG00099.hp1 HG00140.hp1 HG00408.hp2 HG00423.hp2 HG00609.hp2 HG00621.hp1 HG00642.hp2 HG00673.hp1 HG00741.hp2 HG01346.hp1 HG01516.hp2 HG01517.hp1 HG01934.hp1 HG01981.hp2 HG02040.hp1 HG02040.hp2 HG02083.hp1 HG02083.hp2 HG02135.hp1 HG02165.hp1 HG02257.hp2 HG02273.hp2 HG02523.hp1 HG03688.hp2 HG03834.hp2 HG04115.hp2 NA18939.hp1 NA18943.hp1 NA18943.hp2 NA18956.hp1 NA18966.hp2 NA18974.hp1 NA18977.hp2 NA18989.hp2 NA18994.hp2 NA18999.hp1 NA18999.hp2 NA19000.hp1 NA19002.hp1 NA19005.hp2 NA19054.hp1 NA19054.hp2 NA19060.hp1 NA19062.hp1 NA19064.hp2 NA19067.hp1 NA19067.hp2 NA19068.hp1 NA19077.hp1 NA19081.hp1 NA19084.hp1 NA19087.hp2 NA19091.hp2 NA20905.hp2	3_prime_UTR_variant	MODIFIER	c.269T>A c.269T>A	BECN1	ENSG00000126581.13	transcript	ENST00000590099.6	protein_coding	12/12	269	chr17	42810491
chr17:42810682	C C	T T	1	a0001c0001t0003 a0001c0001t0003	13	HG02132.hp2 HG02145.hp1 HG02486.hp1 others(10): Show HG02132.hp2 HG02145.hp1 HG02486.hp1 HG03704.hp2 HG03831.hp1 HG03927.hp1 HG04228.hp2 NA18948.hp1 NA18963.hp2 NA18977.hp1 NA18989.hp1 NA19010.hp1 NA19087.hp1	3_prime_UTR_variant	MODIFIER	c.78G>A c.78G>A	BECN1	ENSG00000126581.13	transcript	ENST00000590099.6	protein_coding	12/12	78	chr17	42810682
chr17:42824227	G G	A A	1	a0001c0001t0006 a0001c0001t0006	2	HG03130.hp2 NA18522.hp1 HG03130.hp2 NA18522.hp1	5_prime_UTR_variant	MODIFIER	c.-75C>T c.-75C>T	BECN1	ENSG00000126581.13	transcript	ENST00000590099.6	protein_coding	1/12	350	chr17	42824227

chr:pos	ref	alt	# # of ghapid:genebody level	ghapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	genename	geneid	featuretype	featureid	genebody_biotype	rank	chr	pos
chr17:42811163	C C	T T	1	a0001c0001t0001g0063 a0001c0001t0001g0063	1	HG02258.hp2 HG02258.hp2	intron_variant	MODIFIER	c.1185-235G>A c.1185-235G>A	BECN1	ENSG00000126581.13	transcript	ENST00000590099.6	protein_coding	11/11	chr17	42811163
chr17:42811284	A A	C C	1	a0001c0001t0001g0071 a0001c0001t0001g0071	1	HG02132.hp1 HG02132.hp1	intron_variant	MODIFIER	c.1185-356T>G c.1185-356T>G	BECN1	ENSG00000126581.13	transcript	ENST00000590099.6	protein_coding	11/11	chr17	42811284
chr17:42811407	G G	A A	1	a0001c0001t0001g0027 a0001c0001t0001g0027	2	HG00438.hp2 NA18973.hp2 HG00438.hp2 NA18973.hp2	intron_variant	MODIFIER	c.1184+248C>T c.1184+248C>T	BECN1	ENSG00000126581.13	transcript	ENST00000590099.6	protein_coding	11/11	chr17	42811407
chr17:42811638	C C	T T	1	a0001c0001t0001g0093 a0001c0001t0001g0093	1	NA19030.hp2 NA19030.hp2	intron_variant	MODIFIER	c.1184+17G>A c.1184+17G>A	BECN1	ENSG00000126581.13	transcript	ENST00000590099.6	protein_coding	11/11	chr17	42811638
chr17:42811886	G G	A A	6	a0001c0001t0001g0004 a0001c0001t0001g0035 a0001c0001t0001g0064 others(3): Show a0001c0001t0001g0004 a0001c0001t0001g0035 a0001c0001t0001g0064 a0001c0001t0001g0068 a0001c0001t0001g0074 a0001c0001t0001g0083	18	HG00140.hp2 HG00323.hp1 HG00597.hp2 others(15): Show HG00140.hp2 HG00323.hp1 HG00597.hp2 HG00639.hp1 HG00741.hp1 HG01074.hp2 HG01081.hp2 HG01106.hp2 HG01346.hp2 HG01433.hp1 HG01516.hp1 HG01517.hp2 HG01975.hp1 HG01981.hp1 HG02004.hp2 HG02602.hp2 HG03710.hp1 HG04199.hp1	intron_variant	MODIFIER	c.1042-89C>T c.1042-89C>T	BECN1	ENSG00000126581.13	transcript	ENST00000590099.6	protein_coding	10/11	chr17	42811886
chr17:42811938	A A	G G	1	a0001c0001t0002g0088 a0001c0001t0002g0088	1	HG00621.hp1 HG00621.hp1	intron_variant	MODIFIER	c.1042-141T>C c.1042-141T>C	BECN1	ENSG00000126581.13	transcript	ENST00000590099.6	protein_coding	10/11	chr17	42811938
chr17:42811957	A A	G G	2	a0001c0001t0002g0070 a0001c0001t0005g0028 a0001c0001t0002g0070 a0001c0001t0005g0028	3	NA18989.hp2 NA18994.hp2 NA19054.hp2 NA18989.hp2 NA18994.hp2 NA19054.hp2	intron_variant	MODIFIER	c.1042-160T>C c.1042-160T>C	BECN1	ENSG00000126581.13	transcript	ENST00000590099.6	protein_coding	10/11	chr17	42811957
chr17:42812128	T T	C C	1	a0001c0001t0001g0042 a0001c0001t0001g0042	1	HG03471.hp1 HG03471.hp1	intron_variant	MODIFIER	c.1042-331A>G c.1042-331A>G	BECN1	ENSG00000126581.13	transcript	ENST00000590099.6	protein_coding	10/11	chr17	42812128
chr17:42812384	C C	CA CA	5	a0001c0001t0001g0022 a0001c0001t0001g0031 a0001c0001t0001g0069 others(2): Show a0001c0001t0001g0022 a0001c0001t0001g0031 a0001c0001t0001g0069 a0001c0001t0002g0062 a0001c0001t0002g0077	8	HG00280.hp1 HG03239.hp2 HG03710.hp2 others(5): Show HG00280.hp1 HG03239.hp2 HG03710.hp2 HG03831.hp2 HG04228.hp1 NA18999.hp2 NA19081.hp2 NA19091.hp2	intron_variant	MODIFIER	c.1042-588dupT c.1042-588dupT	BECN1	ENSG00000126581.13	transcript	ENST00000590099.6	protein_coding	10/11	chr17	42812384
chr17:42812399	C C	A A	1	a0001c0001t0001g0052 a0001c0001t0001g0052	1	HG02818.hp1 HG02818.hp1	intron_variant	MODIFIER	c.1042-602G>T c.1042-602G>T	BECN1	ENSG00000126581.13	transcript	ENST00000590099.6	protein_coding	10/11	chr17	42812399
chr17:42812424	T T	A A	1	a0001c0001t0002g0072 a0001c0001t0002g0072	1	HG02040.hp2 HG02040.hp2	intron_variant	MODIFIER	c.1042-627A>T c.1042-627A>T	BECN1	ENSG00000126581.13	transcript	ENST00000590099.6	protein_coding	10/11	chr17	42812424
chr17:42812628	G G	A A	1	a0001c0001t0001g0073 a0001c0001t0001g0073	1	HG00280.hp2 HG00280.hp2	intron_variant	MODIFIER	c.1042-831C>T c.1042-831C>T	BECN1	ENSG00000126581.13	transcript	ENST00000590099.6	protein_coding	10/11	chr17	42812628
chr17:42812826	C C	CT CT	16	a0001c0001t0001g0009 a0001c0001t0001g0016 a0001c0001t0001g0027 others(13): Show a0001c0001t0001g0009 a0001c0001t0001g0016 a0001c0001t0001g0027 a0001c0001t0001g0031 a0001c0001t0001g0044 a0001c0001t0001g0048 a0001c0001t0001g0057 a0001c0001t0001g0059 a0001c0001t0001g0065 a0001c0001t0001g0067 a0001c0001t0002g0029 a0001c0001t0002g0066 a0001c0001t0002g0078 a0001c0001t0002g0088 a0001c0001t0004g0030 a0001c0001t0005g0028	29	HG00438.hp2 HG00544.hp2 HG00609.hp2 others(26): Show HG00438.hp2 HG00544.hp2 HG00609.hp2 HG00621.hp1 HG00621.hp2 HG01099.hp1 HG01099.hp2 HG01169.hp1 HG01243.hp1 HG01243.hp2 HG01261.hp1 HG02080.hp1 HG02135.hp2 HG02970.hp1 HG03139.hp1 HG03831.hp2 HG03927.hp2 HG04115.hp1 HG04228.hp1 NA18956.hp1 NA18973.hp2 NA18974.hp1 NA18974.hp2 NA18989.hp2 NA18994.hp2 NA19000.hp2 NA19060.hp1 NA19062.hp2 NA19077.hp2	intron_variant	MODIFIER	c.1042-1030dupA c.1042-1030dupA	BECN1	ENSG00000126581.13	transcript	ENST00000590099.6	protein_coding	10/11	chr17	42812826
chr17:42812826	CT CT	C C	15	a0001c0001t0001g0010 a0001c0001t0001g0012 a0001c0001t0001g0033 others(12): Show a0001c0001t0001g0010 a0001c0001t0001g0012 a0001c0001t0001g0033 a0001c0001t0001g0036 a0001c0001t0001g0038 a0001c0001t0001g0040 a0001c0001t0001g0061 a0001c0001t0001g0063 a0001c0001t0001g0074 a0001c0001t0001g0076 a0001c0001t0001g0086 a0001c0001t0001g0092 a0001c0001t0001g0094 a0001c0001t0003g0006 a0001c0001t0003g0091	31	HG00423.hp1 HG01081.hp2 HG01109.hp2 others(28): Show HG00423.hp1 HG01081.hp2 HG01109.hp2 HG01891.hp2 HG02015.hp1 HG02055.hp1 HG02132.hp2 HG02258.hp2 HG02486.hp1 HG02572.hp1 HG02723.hp2 HG02809.hp2 HG02886.hp2 HG02895.hp1 HG02896.hp2 HG02970.hp2 HG03041.hp1 HG03195.hp1 HG03209.hp1 HG03209.hp2 HG03225.hp2 HG03579.hp2 HG03704.hp2 HG04228.hp2 NA18948.hp1 NA18977.hp1 NA18989.hp1 NA19010.hp1 NA19030.hp1 NA19043.hp2 NA21309.hp1	intron_variant	MODIFIER	c.1042-1030delA c.1042-1030delA	BECN1	ENSG00000126581.13	transcript	ENST00000590099.6	protein_coding	10/11	chr17	42812826
chr17:42812898	A A	G G	95	a0001c0001t0001g0001 a0001c0001t0001g0003 a0001c0001t0001g0004 others(92): Show a0001c0001t0001g0001 a0001c0001t0001g0003 a0001c0001t0001g0004 a0001c0001t0001g0005 a0001c0001t0001g0007 a0001c0001t0001g0009 a0001c0001t0001g0010 a0001c0001t0001g0011 a0001c0001t0001g0012 a0001c0001t0001g0013 a0001c0001t0001g0014 a0001c0001t0001g0016 a0001c0001t0001g0018 a0001c0001t0001g0019 a0001c0001t0001g0020 a0001c0001t0001g0022 a0001c0001t0001g0024 a0001c0001t0001g0025 a0001c0001t0001g0026 a0001c0001t0001g0027 a0001c0001t0001g0031 a0001c0001t0001g0033 a0001c0001t0001g0034 a0001c0001t0001g0035 a0001c0001t0001g0036 a0001c0001t0001g0037 a0001c0001t0001g0038 a0001c0001t0001g0039 a0001c0001t0001g0040 a0001c0001t0001g0041 a0001c0001t0001g0042 a0001c0001t0001g0043 a0001c0001t0001g0044 a0001c0001t0001g0046 a0001c0001t0001g0047 a0001c0001t0001g0048 a0001c0001t0001g0049 a0001c0001t0001g0050 a0001c0001t0001g0051 a0001c0001t0001g0052 a0001c0001t0001g0054 a0001c0001t0001g0055 a0001c0001t0001g0056 a0001c0001t0001g0057 a0001c0001t0001g0059 a0001c0001t0001g0060 a0001c0001t0001g0061 a0001c0001t0001g0063 a0001c0001t0001g0064 a0001c0001t0001g0065 a0001c0001t0001g0067 a0001c0001t0001g0068 a0001c0001t0001g0069 a0001c0001t0001g0071 a0001c0001t0001g0073 a0001c0001t0001g0074 a0001c0001t0001g0076 a0001c0001t0001g0080 a0001c0001t0001g0083 a0001c0001t0001g0084 a0001c0001t0001g0086 a0001c0001t0001g0087 a0001c0001t0001g0092 a0001c0001t0001g0093 a0001c0001t0001g0094 a0001c0001t0002g0002 a0001c0001t0002g0008 a0001c0001t0002g0015 a0001c0001t0002g0017 a0001c0001t0002g0029 a0001c0001t0002g0045 a0001c0001t0002g0058 a0001c0001t0002g0062 a0001c0001t0002g0066 a0001c0001t0002g0070 a0001c0001t0002g0072 a0001c0001t0002g0077 a0001c0001t0002g0078 a0001c0001t0002g0079 a0001c0001t0002g0081 a0001c0001t0002g0085 a0001c0001t0002g0088 a0001c0001t0003g0006 a0001c0001t0003g0023 a0001c0001t0003g0089 a0001c0001t0003g0090 a0001c0001t0003g0091 a0001c0001t0004g0030 a0001c0001t0004g0032 a0001c0001t0005g0028 a0001c0001t0006g0095 a0001c0001t0006g0096 a0001c0002t0001g0021 a0001c0004t0001g0082 a0002c0003t0002g0053	273	HG00099.hp1 HG00099.hp2 HG00140.hp1 others(270): Show HG00099.hp1 HG00099.hp2 HG00140.hp1 HG00140.hp2 HG00280.hp1 HG00280.hp2 HG00323.hp1 HG00323.hp2 HG00408.hp1 HG00408.hp2 HG00423.hp1 HG00423.hp2 HG00438.hp1 HG00438.hp2 HG00544.hp1 HG00544.hp2 HG00597.hp1 HG00597.hp2 HG00609.hp1 HG00609.hp2 HG00621.hp1 HG00621.hp2 HG00639.hp1 HG00639.hp2 HG00642.hp1 HG00642.hp2 HG00673.hp1 HG00673.hp2 HG00735.hp1 HG00735.hp2 HG00741.hp1 HG00741.hp2 HG01070.hp1 HG01070.hp2 HG01074.hp1 HG01074.hp2 HG01081.hp1 HG01081.hp2 HG01099.hp1 HG01099.hp2 HG01106.hp1 HG01106.hp2 HG01109.hp1 HG01109.hp2 HG01169.hp1 HG01169.hp2 HG01175.hp1 HG01175.hp2 HG01243.hp1 HG01243.hp2 HG01255.hp1 HG01255.hp2 HG01261.hp1 HG01261.hp2 HG01346.hp1 HG01346.hp2 HG01361.hp1 HG01361.hp2 HG01433.hp1 HG01433.hp2 HG01496.hp1 HG01496.hp2 HG01516.hp1 HG01516.hp2 HG01517.hp1 HG01517.hp2 HG01891.hp1 HG01891.hp2 HG01934.hp1 HG01934.hp2 HG01943.hp1 HG01943.hp2 HG01975.hp1 HG01975.hp2 HG01978.hp1 HG01978.hp2 HG01981.hp1 HG01981.hp2 HG02004.hp1 HG02004.hp2 HG02015.hp1 HG02015.hp2 HG02040.hp1 HG02040.hp2 HG02055.hp1 HG02055.hp2 HG02080.hp1 HG02080.hp2 HG02083.hp1 HG02083.hp2 HG02132.hp1 HG02132.hp2 HG02135.hp1 HG02135.hp2 HG02145.hp1 HG02145.hp2 HG02165.hp1 HG02165.hp2 HG02257.hp1 HG02257.hp2 HG02258.hp1 HG02258.hp2 HG02273.hp1 HG02273.hp2 HG02280.hp1 HG02280.hp2 HG02293.hp1 HG02293.hp2 HG02300.hp1 HG02300.hp2 HG02451.hp1 HG02451.hp2 HG02486.hp1 HG02486.hp2 HG02523.hp1 HG02523.hp2 HG02559.hp1 HG02559.hp2 HG02572.hp1 HG02572.hp2 HG02602.hp1 HG02602.hp2 HG02622.hp1 HG02622.hp2 HG02630.hp1 HG02630.hp2 HG02717.hp1 HG02717.hp2 HG02723.hp1 HG02723.hp2 HG02735.hp1 HG02735.hp2 HG02809.hp1 HG02809.hp2 HG02818.hp1 HG02818.hp2 HG02886.hp1 HG02886.hp2 HG02895.hp1 HG02895.hp2 HG02896.hp1 HG02896.hp2 HG02965.hp1 HG02965.hp2 HG02970.hp1 HG02970.hp2 HG02976.hp1 HG02976.hp2 HG03017.hp1 HG03017.hp2 HG03041.hp1 HG03041.hp2 HG03098.hp1 HG03098.hp2 HG03130.hp1 HG03130.hp2 HG03139.hp1 HG03139.hp2 HG03195.hp1 HG03195.hp2 HG03209.hp1 HG03209.hp2 HG03225.hp1 HG03225.hp2 HG03239.hp1 HG03239.hp2 HG03471.hp1 HG03471.hp2 HG03486.hp1 HG03486.hp2 HG03516.hp1 HG03516.hp2 HG03540.hp1 HG03540.hp2 HG03579.hp1 HG03579.hp2 HG03654.hp1 HG03654.hp2 HG03688.hp1 HG03688.hp2 HG03704.hp1 HG03704.hp2 HG03710.hp1 HG03710.hp2 HG03831.hp1 HG03831.hp2 HG03834.hp1 HG03834.hp2 HG03927.hp1 HG03927.hp2 HG04115.hp1 HG04115.hp2 HG04199.hp1 HG04199.hp2 HG04204.hp1 HG04204.hp2 HG04228.hp1 HG04228.hp2 HG06807.hp1 HG06807.hp2 NA18522.hp1 NA18522.hp2 NA18906.hp1 NA18906.hp2 NA18939.hp1 NA18939.hp2 NA18943.hp1 NA18943.hp2 NA18948.hp1 NA18948.hp2 NA18953.hp1 NA18953.hp2 NA18956.hp1 NA18956.hp2 NA18963.hp1 NA18963.hp2 NA18966.hp1 NA18966.hp2 NA18973.hp1 NA18973.hp2 NA18974.hp1 NA18974.hp2 NA18977.hp1 NA18977.hp2 NA18989.hp1 NA18989.hp2 NA18994.hp1 NA18994.hp2 NA18999.hp1 NA18999.hp2 NA19000.hp1 NA19000.hp2 NA19002.hp1 NA19002.hp2 NA19005.hp1 NA19005.hp2 NA19009.hp1 NA19009.hp2 NA19010.hp1 NA19010.hp2 NA19030.hp1 NA19030.hp2 NA19043.hp1 NA19043.hp2 NA19054.hp1 NA19054.hp2 NA19060.hp1 NA19060.hp2 NA19062.hp1 NA19062.hp2 NA19064.hp1 NA19064.hp2 NA19067.hp1 NA19067.hp2 NA19068.hp1 NA19068.hp2 NA19077.hp1 NA19077.hp2 NA19081.hp1 NA19081.hp2 NA19084.hp1 NA19084.hp2 NA19087.hp1 NA19087.hp2 NA19091.hp1 NA19091.hp2 NA19240.hp1 NA19240.hp2 NA20905.hp1 NA20905.hp2 NA21309.hp1 NA21309.hp2 homoSapiens_chm13v2.hp1	intron_variant	MODIFIER	c.1041+1050T>C c.1041+1050T>C	BECN1	ENSG00000126581.13	transcript	ENST00000590099.6	protein_coding	10/11	chr17	42812898
chr17:42812942	C C	T T	9	a0001c0001t0001g0003 a0001c0001t0001g0016 a0001c0001t0001g0026 others(6): Show a0001c0001t0001g0003 a0001c0001t0001g0016 a0001c0001t0001g0026 a0001c0001t0001g0027 a0001c0001t0001g0056 a0001c0001t0001g0059 a0001c0001t0001g0065 a0001c0001t0001g0069 a0001c0001t0001g0080	27	HG00408.hp1 HG00438.hp2 HG00544.hp2 others(24): Show HG00408.hp1 HG00438.hp2 HG00544.hp2 HG00597.hp1 HG01169.hp2 HG01243.hp1 HG02015.hp2 HG02080.hp1 HG02165.hp2 HG02300.hp2 HG02451.hp2 HG02486.hp2 HG02572.hp2 HG02717.hp1 HG02723.hp1 HG02735.hp2 HG02895.hp2 HG02970.hp1 HG03017.hp1 HG03654.hp1 HG03927.hp2 NA18973.hp2 NA19062.hp2 NA19081.hp2 NA19084.hp2 NA19091.hp1 NA20905.hp1	intron_variant	MODIFIER	c.1041+1006G>A c.1041+1006G>A	BECN1	ENSG00000126581.13	transcript	ENST00000590099.6	protein_coding	10/11	chr17	42812942
chr17:42813001	A A	AT AT	15	a0001c0001t0001g0013 a0001c0001t0001g0027 a0001c0001t0001g0042 others(12): Show a0001c0001t0001g0013 a0001c0001t0001g0027 a0001c0001t0001g0042 a0001c0001t0001g0046 a0001c0001t0001g0049 a0001c0001t0001g0065 a0001c0001t0001g0067 a0001c0001t0001g0068 a0001c0001t0002g0008 a0001c0001t0002g0045 a0001c0001t0002g0066 a0001c0001t0002g0078 a0001c0001t0002g0079 a0001c0001t0002g0085 a0001c0001t0003g0023	27	HG00438.hp2 HG00621.hp2 HG00741.hp2 others(24): Show HG00438.hp2 HG00621.hp2 HG00741.hp2 HG01106.hp1 HG01106.hp2 HG01243.hp1 HG01934.hp2 HG01978.hp1 HG01978.hp2 HG01981.hp2 HG02055.hp2 HG02083.hp1 HG02083.hp2 HG03471.hp1 HG03927.hp1 HG04204.hp1 NA18943.hp1 NA18956.hp1 NA18956.hp2 NA18963.hp2 NA18973.hp2 NA18974.hp1 NA18999.hp1 NA19002.hp1 NA19054.hp1 NA19087.hp1 NA19087.hp2	intron_variant	MODIFIER	c.1041+946dupA c.1041+946dupA	BECN1	ENSG00000126581.13	transcript	ENST00000590099.6	protein_coding	10/11	chr17	42813001
chr17:42813001	AT AT	A A	4	a0001c0001t0001g0012 a0001c0001t0001g0036 a0001c0001t0001g0039 others(1): Show a0001c0001t0001g0012 a0001c0001t0001g0036 a0001c0001t0001g0039 a0001c0001t0001g0040	8	HG01109.hp2 HG02572.hp1 HG02809.hp2 others(5): Show HG01109.hp2 HG02572.hp1 HG02809.hp2 HG03041.hp1 HG03225.hp2 HG03486.hp2 HG03579.hp2 NA19043.hp2	intron_variant	MODIFIER	c.1041+946delA c.1041+946delA	BECN1	ENSG00000126581.13	transcript	ENST00000590099.6	protein_coding	10/11	chr17	42813001
chr17:42813034	C C	T T	1	a0001c0001t0001g0064 a0001c0001t0001g0064	1	HG02602.hp2 HG02602.hp2	intron_variant	MODIFIER	c.1041+914G>A c.1041+914G>A	BECN1	ENSG00000126581.13	transcript	ENST00000590099.6	protein_coding	10/11	chr17	42813034
chr17:42813045	T T	C C	1	a0001c0001t0001g0076 a0001c0001t0001g0076	1	HG00423.hp1 HG00423.hp1	intron_variant	MODIFIER	c.1041+903A>G c.1041+903A>G	BECN1	ENSG00000126581.13	transcript	ENST00000590099.6	protein_coding	10/11	chr17	42813045
chr17:42813084	T T	G G	2	a0001c0001t0001g0010 a0001c0001t0001g0086 a0001c0001t0001g0010 a0001c0001t0001g0086	7	HG01891.hp2 HG02723.hp2 HG02895.hp1 others(4): Show HG01891.hp2 HG02723.hp2 HG02895.hp1 HG02896.hp2 HG03195.hp1 NA19030.hp1 NA21309.hp1	intron_variant	MODIFIER	c.1041+864A>C c.1041+864A>C	BECN1	ENSG00000126581.13	transcript	ENST00000590099.6	protein_coding	10/11	chr17	42813084
chr17:42813106	A A	G G	1	a0001c0001t0001g0026 a0001c0001t0001g0026	2	HG02572.hp2 HG02717.hp1 HG02572.hp2 HG02717.hp1	intron_variant	MODIFIER	c.1041+842T>C c.1041+842T>C	BECN1	ENSG00000126581.13	transcript	ENST00000590099.6	protein_coding	10/11	chr17	42813106
chr17:42813126	G G	A A	5	a0001c0001t0003g0006 a0001c0001t0003g0023 a0001c0001t0003g0089 others(2): Show a0001c0001t0003g0006 a0001c0001t0003g0023 a0001c0001t0003g0089 a0001c0001t0003g0090 a0001c0001t0003g0091	13	HG02132.hp2 HG02145.hp1 HG02486.hp1 others(10): Show HG02132.hp2 HG02145.hp1 HG02486.hp1 HG03704.hp2 HG03831.hp1 HG03927.hp1 HG04228.hp2 NA18948.hp1 NA18963.hp2 NA18977.hp1 NA18989.hp1 NA19010.hp1 NA19087.hp1	intron_variant	MODIFIER	c.1041+822C>T c.1041+822C>T	BECN1	ENSG00000126581.13	transcript	ENST00000590099.6	protein_coding	10/11	chr17	42813126
chr17:42813137	C C	G G	1	a0001c0001t0001g0087 a0001c0001t0001g0087	1	HG04199.hp2 HG04199.hp2	intron_variant	MODIFIER	c.1041+811G>C c.1041+811G>C	BECN1	ENSG00000126581.13	transcript	ENST00000590099.6	protein_coding	10/11	chr17	42813137
chr17:42813148	G G	C C	3	a0001c0001t0003g0006 a0001c0001t0003g0023 a0001c0001t0003g0089 a0001c0001t0003g0006 a0001c0001t0003g0023 a0001c0001t0003g0089	11	HG02132.hp2 HG03704.hp2 HG03831.hp1 others(8): Show HG02132.hp2 HG03704.hp2 HG03831.hp1 HG03927.hp1 HG04228.hp2 NA18948.hp1 NA18963.hp2 NA18977.hp1 NA18989.hp1 NA19010.hp1 NA19087.hp1	intron_variant	MODIFIER	c.1041+800C>G c.1041+800C>G	BECN1	ENSG00000126581.13	transcript	ENST00000590099.6	protein_coding	10/11	chr17	42813148
chr17:42813262	C C	T T	1	a0001c0001t0001g0063 a0001c0001t0001g0063	1	HG02258.hp2 HG02258.hp2	intron_variant	MODIFIER	c.1041+686G>A c.1041+686G>A	BECN1	ENSG00000126581.13	transcript	ENST00000590099.6	protein_coding	10/11	chr17	42813262
chr17:42813333	G G	C C	1	a0001c0001t0001g0076 a0001c0001t0001g0076	1	HG00423.hp1 HG00423.hp1	intron_variant	MODIFIER	c.1041+615C>G c.1041+615C>G	BECN1	ENSG00000126581.13	transcript	ENST00000590099.6	protein_coding	10/11	chr17	42813333
chr17:42813418	C C	T T	2	a0001c0001t0002g0015 a0001c0001t0002g0062 a0001c0001t0002g0015 a0001c0001t0002g0062	5	NA18943.hp2 NA18977.hp2 NA19000.hp1 others(2): Show NA18943.hp2 NA18977.hp2 NA19000.hp1 NA19077.hp1 NA19091.hp2	intron_variant	MODIFIER	c.1041+530G>A c.1041+530G>A	BECN1	ENSG00000126581.13	transcript	ENST00000590099.6	protein_coding	10/11	chr17	42813418
chr17:42813579	C C	T T	3	a0001c0001t0001g0019 a0001c0001t0001g0043 a0001c0001t0001g0044 a0001c0001t0001g0019 a0001c0001t0001g0043 a0001c0001t0001g0044	5	HG02630.hp2 HG03098.hp2 HG03139.hp1 others(2): Show HG02630.hp2 HG03098.hp2 HG03139.hp1 HG03516.hp1 NA18906.hp2	intron_variant	MODIFIER	c.1041+369G>A c.1041+369G>A	BECN1	ENSG00000126581.13	transcript	ENST00000590099.6	protein_coding	10/11	chr17	42813579
chr17:42813809	C C	T T	1	a0001c0002t0001g0021 a0001c0002t0001g0021	3	HG02976.hp1 HG03540.hp1 HG06807.hp1 HG02976.hp1 HG03540.hp1 HG06807.hp1	intron_variant	MODIFIER	c.1041+139G>A c.1041+139G>A	BECN1	ENSG00000126581.13	transcript	ENST00000590099.6	protein_coding	10/11	chr17	42813809
chr17:42813905	T T	C C	1	a0001c0001t0001g0094 a0001c0001t0001g0094	1	HG03209.hp2 HG03209.hp2	intron_variant	MODIFIER	c.1041+43A>G c.1041+43A>G	BECN1	ENSG00000126581.13	transcript	ENST00000590099.6	protein_coding	10/11	chr17	42813905
chr17:42814062	T T	C C	2	a0001c0001t0001g0014 a0001c0001t0001g0051 a0001c0001t0001g0014 a0001c0001t0001g0051	5	HG02145.hp2 HG02280.hp1 HG02451.hp1 others(2): Show HG02145.hp2 HG02280.hp1 HG02451.hp1 HG02717.hp2 HG03195.hp2	intron_variant	MODIFIER	c.981-54A>G c.981-54A>G	BECN1	ENSG00000126581.13	transcript	ENST00000590099.6	protein_coding	9/11	chr17	42814062
chr17:42814148	T T	C C	1	a0001c0001t0002g0058 a0001c0001t0002g0058	1	HG03834.hp2 HG03834.hp2	intron_variant	MODIFIER	c.981-140A>G c.981-140A>G	BECN1	ENSG00000126581.13	transcript	ENST00000590099.6	protein_coding	9/11	chr17	42814148
chr17:42814197	A A	C C	1	a0001c0001t0001g0061 a0001c0001t0001g0061	1	HG02886.hp2 HG02886.hp2	intron_variant	MODIFIER	c.981-189T>G c.981-189T>G	BECN1	ENSG00000126581.13	transcript	ENST00000590099.6	protein_coding	9/11	chr17	42814197
chr17:42814358	G G	C C	2	a0001c0001t0002g0017 a0001c0001t0002g0077 a0001c0001t0002g0017 a0001c0001t0002g0077	5	HG00408.hp2 NA18999.hp2 NA19067.hp2 others(2): Show HG00408.hp2 NA18999.hp2 NA19067.hp2 NA19068.hp1 NA19081.hp1	intron_variant	MODIFIER	c.980+166C>G c.980+166C>G	BECN1	ENSG00000126581.13	transcript	ENST00000590099.6	protein_coding	9/11	chr17	42814358
chr17:42814436	C C	T T	1	a0001c0001t0001g0025 a0001c0001t0001g0025	2	NA18966.hp1 NA19060.hp2 NA18966.hp1 NA19060.hp2	intron_variant	MODIFIER	c.980+88G>A c.980+88G>A	BECN1	ENSG00000126581.13	transcript	ENST00000590099.6	protein_coding	9/11	chr17	42814436
chr17:42814445	T T	C C	3	a0001c0001t0001g0019 a0001c0001t0001g0043 a0001c0001t0001g0044 a0001c0001t0001g0019 a0001c0001t0001g0043 a0001c0001t0001g0044	5	HG02630.hp2 HG03098.hp2 HG03139.hp1 others(2): Show HG02630.hp2 HG03098.hp2 HG03139.hp1 HG03516.hp1 NA18906.hp2	intron_variant	MODIFIER	c.980+79A>G c.980+79A>G	BECN1	ENSG00000126581.13	transcript	ENST00000590099.6	protein_coding	9/11	chr17	42814445
chr17:42814515	A A	G G	1	a0001c0001t0001g0020 a0001c0001t0001g0020	3	HG02809.hp1 HG06807.hp2 NA19240.hp2 HG02809.hp1 HG06807.hp2 NA19240.hp2	intron_variant	MODIFIER	c.980+9T>C c.980+9T>C	BECN1	ENSG00000126581.13	transcript	ENST00000590099.6	protein_coding	9/11	chr17	42814515
chr17:42814929	G G	A A	3	a0001c0001t0001g0019 a0001c0001t0001g0043 a0001c0001t0001g0044 a0001c0001t0001g0019 a0001c0001t0001g0043 a0001c0001t0001g0044	5	HG02630.hp2 HG03098.hp2 HG03139.hp1 others(2): Show HG02630.hp2 HG03098.hp2 HG03139.hp1 HG03516.hp1 NA18906.hp2	intron_variant	MODIFIER	c.831-256C>T c.831-256C>T	BECN1	ENSG00000126581.13	transcript	ENST00000590099.6	protein_coding	8/11	chr17	42814929
chr17:42814987	T T	C C	1	a0001c0001t0001g0043 a0001c0001t0001g0043	1	HG03098.hp2 HG03098.hp2	intron_variant	MODIFIER	c.831-314A>G c.831-314A>G	BECN1	ENSG00000126581.13	transcript	ENST00000590099.6	protein_coding	8/11	chr17	42814987
chr17:42815781	G G	A A	2	a0001c0001t0001g0010 a0001c0001t0001g0086 a0001c0001t0001g0010 a0001c0001t0001g0086	7	HG01891.hp2 HG02723.hp2 HG02895.hp1 others(4): Show HG01891.hp2 HG02723.hp2 HG02895.hp1 HG02896.hp2 HG03195.hp1 NA19030.hp1 NA21309.hp1	intron_variant	MODIFIER	c.830+127C>T c.830+127C>T	BECN1	ENSG00000126581.13	transcript	ENST00000590099.6	protein_coding	8/11	chr17	42815781
chr17:42815813	A A	G G	1	a0001c0001t0001g0060 a0001c0001t0001g0060	1	HG01175.hp2 HG01175.hp2	intron_variant	MODIFIER	c.830+95T>C c.830+95T>C	BECN1	ENSG00000126581.13	transcript	ENST00000590099.6	protein_coding	8/11	chr17	42815813
chr17:42816099	C C	T T	1	a0001c0001t0001g0043 a0001c0001t0001g0043	1	HG03098.hp2 HG03098.hp2	intron_variant	MODIFIER	c.684-45G>A c.684-45G>A	BECN1	ENSG00000126581.13	transcript	ENST00000590099.6	protein_coding	7/11	chr17	42816099
chr17:42816128	C C	T T	1	a0001c0001t0001g0059 a0001c0001t0001g0059	1	HG03927.hp2 HG03927.hp2	intron_variant	MODIFIER	c.684-74G>A c.684-74G>A	BECN1	ENSG00000126581.13	transcript	ENST00000590099.6	protein_coding	7/11	chr17	42816128
chr17:42816182	T T	C C	1	a0001c0002t0001g0021 a0001c0002t0001g0021	3	HG02976.hp1 HG03540.hp1 HG06807.hp1 HG02976.hp1 HG03540.hp1 HG06807.hp1	intron_variant	MODIFIER	c.684-128A>G c.684-128A>G	BECN1	ENSG00000126581.13	transcript	ENST00000590099.6	protein_coding	7/11	chr17	42816182
chr17:42816408	T T	C C	1	a0001c0001t0006g0096 a0001c0001t0006g0096	1	HG03130.hp2 HG03130.hp2	intron_variant	MODIFIER	c.684-354A>G c.684-354A>G	BECN1	ENSG00000126581.13	transcript	ENST00000590099.6	protein_coding	7/11	chr17	42816408
chr17:42816457	G G	A A	3	a0001c0001t0001g0007 a0001c0001t0001g0046 a0001c0001t0001g0047 a0001c0001t0001g0007 a0001c0001t0001g0046 a0001c0001t0001g0047	8	HG01109.hp1 HG01361.hp2 HG01496.hp1 others(5): Show HG01109.hp1 HG01361.hp2 HG01496.hp1 HG01943.hp1 HG01978.hp2 HG02004.hp1 HG02273.hp1 HG02293.hp1	intron_variant	MODIFIER	c.684-403C>T c.684-403C>T	BECN1	ENSG00000126581.13	transcript	ENST00000590099.6	protein_coding	7/11	chr17	42816457
chr17:42816638	A A	T T	1	a0001c0001t0002g0058 a0001c0001t0002g0058	1	HG03834.hp2 HG03834.hp2	intron_variant	MODIFIER	c.684-584T>A c.684-584T>A	BECN1	ENSG00000126581.13	transcript	ENST00000590099.6	protein_coding	7/11	chr17	42816638
chr17:42816649	C C	CA CA	12	a0001c0001t0001g0034 a0001c0001t0001g0051 a0001c0001t0001g0084 others(9): Show a0001c0001t0001g0034 a0001c0001t0001g0051 a0001c0001t0001g0084 a0001c0001t0001g0093 a0001c0001t0002g0045 a0001c0001t0002g0078 a0001c0001t0002g0079 a0001c0001t0003g0006 a0001c0001t0003g0023 a0001c0001t0003g0089 a0001c0001t0003g0090 a0001c0001t0003g0091	21	HG01943.hp2 HG02132.hp2 HG02145.hp1 others(18): Show HG01943.hp2 HG02132.hp2 HG02145.hp1 HG02451.hp1 HG02486.hp1 HG03017.hp2 HG03704.hp2 HG03831.hp1 HG03834.hp1 HG03927.hp1 HG04228.hp2 NA18948.hp1 NA18963.hp2 NA18974.hp1 NA18977.hp1 NA18989.hp1 NA18999.hp1 NA19010.hp1 NA19030.hp2 NA19054.hp1 NA19087.hp1	intron_variant	MODIFIER	c.684-596dupT c.684-596dupT	BECN1	ENSG00000126581.13	transcript	ENST00000590099.6	protein_coding	7/11	chr17	42816649
chr17:42816649	CA CA	C C	11	a0001c0001t0001g0012 a0001c0001t0001g0024 a0001c0001t0001g0036 others(8): Show a0001c0001t0001g0012 a0001c0001t0001g0024 a0001c0001t0001g0036 a0001c0001t0001g0037 a0001c0001t0001g0038 a0001c0001t0001g0039 a0001c0001t0001g0040 a0001c0001t0001g0043 a0001c0001t0001g0056 a0001c0001t0001g0057 a0001c0001t0001g0094	16	HG00323.hp2 HG01109.hp2 HG01169.hp1 others(13): Show HG00323.hp2 HG01109.hp2 HG01169.hp1 HG01169.hp2 HG02572.hp1 HG02809.hp2 HG02886.hp1 HG03041.hp1 HG03098.hp2 HG03209.hp1 HG03209.hp2 HG03225.hp2 HG03486.hp2 HG03579.hp2 NA18973.hp1 NA19043.hp2	intron_variant	MODIFIER	c.684-596delT c.684-596delT	BECN1	ENSG00000126581.13	transcript	ENST00000590099.6	protein_coding	7/11	chr17	42816649
chr17:42816808	T T	TAAAAAAA others(311): Show TAAAAAAATAAAATTAGCAGGCCGGGCGCGGTGGCTCACGCCTGTAATCC CAGCACTCTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAG ACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAA ATTAGCCGGGCGTGGTAGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGC TGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCG AGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTC AAAAAAAAAAAAATAAAAA	1	a0001c0001t0001g0087 a0001c0001t0001g0087	1	HG04199.hp2 HG04199.hp2	intron_variant	MODIFIER	c.684-755_684-754ins others(318): Show c.684-755_684-754insTTTTTATTTTTTTTTTTTTGAGACGGAGTC TCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCGATCTCGGCTCACTGC AAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGT AGCTGGGACTACAGGCGCCCGCTACCACGCCCGGCTAATTTTTTGTATTT TTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCT GACCTCGTGATCCGCCCGCCTCGGCCTCCCAGAGTGCTGGGATTACAGGC GTGAGCCACCGCGCCCGGCCTGCTAATTTTATTTTTTT	BECN1	ENSG00000126581.13	transcript	ENST00000590099.6	protein_coding	7/11	chr17	42816808
chr17:42817002	T T	G G	3	a0001c0001t0001g0019 a0001c0001t0001g0043 a0001c0001t0001g0044 a0001c0001t0001g0019 a0001c0001t0001g0043 a0001c0001t0001g0044	5	HG02630.hp2 HG03098.hp2 HG03139.hp1 others(2): Show HG02630.hp2 HG03098.hp2 HG03139.hp1 HG03516.hp1 NA18906.hp2	intron_variant	MODIFIER	c.684-948A>C c.684-948A>C	BECN1	ENSG00000126581.13	transcript	ENST00000590099.6	protein_coding	7/11	chr17	42817002
chr17:42817205	G G	A A	1	a0001c0001t0001g0047 a0001c0001t0001g0047	1	HG01496.hp1 HG01496.hp1	intron_variant	MODIFIER	c.683+1016C>T c.683+1016C>T	BECN1	ENSG00000126581.13	transcript	ENST00000590099.6	protein_coding	7/11	chr17	42817205
chr17:42817295	T T	TA TA	11	a0001c0001t0001g0018 a0001c0001t0001g0080 a0001c0001t0001g0094 others(8): Show a0001c0001t0001g0018 a0001c0001t0001g0080 a0001c0001t0001g0094 a0001c0001t0002g0081 a0001c0001t0002g0088 a0001c0001t0003g0006 a0001c0001t0003g0023 a0001c0001t0003g0089 a0001c0001t0003g0090 a0001c0001t0003g0091 a0001c0001t0006g0096	22	HG00621.hp1 HG02132.hp2 HG02145.hp1 others(19): Show HG00621.hp1 HG02132.hp2 HG02145.hp1 HG02165.hp2 HG02486.hp1 HG02976.hp2 HG03098.hp1 HG03130.hp2 HG03209.hp2 HG03688.hp1 HG03688.hp2 HG03704.hp2 HG03831.hp1 HG03927.hp1 HG04228.hp2 NA18948.hp1 NA18963.hp2 NA18977.hp1 NA18989.hp1 NA19010.hp1 NA19087.hp1 NA21309.hp2	intron_variant	MODIFIER	c.683+925dupT c.683+925dupT	BECN1	ENSG00000126581.13	transcript	ENST00000590099.6	protein_coding	7/11	chr17	42817295
chr17:42817518	G G	A A	1	a0001c0001t0001g0042 a0001c0001t0001g0042	1	HG03471.hp1 HG03471.hp1	intron_variant	MODIFIER	c.683+703C>T c.683+703C>T	BECN1	ENSG00000126581.13	transcript	ENST00000590099.6	protein_coding	7/11	chr17	42817518
chr17:42817808	C C	T T	1	a0001c0001t0001g0055 a0001c0001t0001g0055	1	HG02896.hp1 HG02896.hp1	intron_variant	MODIFIER	c.683+413G>A c.683+413G>A	BECN1	ENSG00000126581.13	transcript	ENST00000590099.6	protein_coding	7/11	chr17	42817808
chr17:42818041	A A	G G	9	a0001c0001t0001g0012 a0001c0001t0001g0036 a0001c0001t0001g0037 others(6): Show a0001c0001t0001g0012 a0001c0001t0001g0036 a0001c0001t0001g0037 a0001c0001t0001g0038 a0001c0001t0001g0039 a0001c0001t0001g0040 a0001c0001t0001g0092 a0001c0001t0001g0093 a0001c0001t0001g0094	13	HG01109.hp2 HG02055.hp1 HG02572.hp1 others(10): Show HG01109.hp2 HG02055.hp1 HG02572.hp1 HG02809.hp2 HG02886.hp1 HG03041.hp1 HG03209.hp1 HG03209.hp2 HG03225.hp2 HG03486.hp2 HG03579.hp2 NA19030.hp2 NA19043.hp2	intron_variant	MODIFIER	c.683+180T>C c.683+180T>C	BECN1	ENSG00000126581.13	transcript	ENST00000590099.6	protein_coding	7/11	chr17	42818041
chr17:42818110	C C	T T	1	a0001c0001t0001g0054 a0001c0001t0001g0054	1	HG03486.hp1 HG03486.hp1	intron_variant	MODIFIER	c.683+111G>A c.683+111G>A	BECN1	ENSG00000126581.13	transcript	ENST00000590099.6	protein_coding	7/11	chr17	42818110
chr17:42818133	T T	C C	1	a0001c0001t0001g0092 a0001c0001t0001g0092	1	HG02055.hp1 HG02055.hp1	intron_variant	MODIFIER	c.683+88A>G c.683+88A>G	BECN1	ENSG00000126581.13	transcript	ENST00000590099.6	protein_coding	7/11	chr17	42818133
chr17:42818186	C C	T T	1	a0001c0002t0001g0021 a0001c0002t0001g0021	3	HG02976.hp1 HG03540.hp1 HG06807.hp1 HG02976.hp1 HG03540.hp1 HG06807.hp1	intron_variant	MODIFIER	c.683+35G>A c.683+35G>A	BECN1	ENSG00000126581.13	transcript	ENST00000590099.6	protein_coding	7/11	chr17	42818186
chr17:42818206	A A	G G	7	a0001c0001t0001g0012 a0001c0001t0001g0036 a0001c0001t0001g0037 others(4): Show a0001c0001t0001g0012 a0001c0001t0001g0036 a0001c0001t0001g0037 a0001c0001t0001g0038 a0001c0001t0001g0039 a0001c0001t0001g0040 a0001c0001t0001g0094	11	HG01109.hp2 HG02572.hp1 HG02809.hp2 others(8): Show HG01109.hp2 HG02572.hp1 HG02809.hp2 HG02886.hp1 HG03041.hp1 HG03209.hp1 HG03209.hp2 HG03225.hp2 HG03486.hp2 HG03579.hp2 NA19043.hp2	intron_variant	MODIFIER	c.683+15T>C c.683+15T>C	BECN1	ENSG00000126581.13	transcript	ENST00000590099.6	protein_coding	7/11	chr17	42818206
chr17:42818209	G G	A A	1	a0001c0001t0001g0052 a0001c0001t0001g0052	1	HG02818.hp1 HG02818.hp1	intron_variant	MODIFIER	c.683+12C>T c.683+12C>T	BECN1	ENSG00000126581.13	transcript	ENST00000590099.6	protein_coding	7/11	chr17	42818209
chr17:42818448	G G	A A	7	a0001c0001t0001g0012 a0001c0001t0001g0036 a0001c0001t0001g0037 others(4): Show a0001c0001t0001g0012 a0001c0001t0001g0036 a0001c0001t0001g0037 a0001c0001t0001g0038 a0001c0001t0001g0039 a0001c0001t0001g0040 a0001c0001t0001g0094	11	HG01109.hp2 HG02572.hp1 HG02809.hp2 others(8): Show HG01109.hp2 HG02572.hp1 HG02809.hp2 HG02886.hp1 HG03041.hp1 HG03209.hp1 HG03209.hp2 HG03225.hp2 HG03486.hp2 HG03579.hp2 NA19043.hp2	intron_variant	MODIFIER	c.489-33C>T c.489-33C>T	BECN1	ENSG00000126581.13	transcript	ENST00000590099.6	protein_coding	6/11	chr17	42818448
chr17:42818480	T T	C C	2	a0001c0001t0003g0090 a0001c0001t0003g0091 a0001c0001t0003g0090 a0001c0001t0003g0091	2	HG02145.hp1 HG02486.hp1 HG02145.hp1 HG02486.hp1	intron_variant	MODIFIER	c.488+64A>G c.488+64A>G	BECN1	ENSG00000126581.13	transcript	ENST00000590099.6	protein_coding	6/11	chr17	42818480
chr17:42818525	T T	C C	1	a0001c0001t0001g0094 a0001c0001t0001g0094	1	HG03209.hp2 HG03209.hp2	intron_variant	MODIFIER	c.488+19A>G c.488+19A>G	BECN1	ENSG00000126581.13	transcript	ENST00000590099.6	protein_coding	6/11	chr17	42818525
chr17:42818731	A A	G G	5	a0001c0001t0001g0014 a0001c0001t0001g0049 a0001c0001t0001g0050 others(2): Show a0001c0001t0001g0014 a0001c0001t0001g0049 a0001c0001t0001g0050 a0001c0001t0001g0051 a0001c0001t0001g0052	8	HG02055.hp2 HG02145.hp2 HG02280.hp1 others(5): Show HG02055.hp2 HG02145.hp2 HG02280.hp1 HG02451.hp1 HG02717.hp2 HG02818.hp1 HG03195.hp2 HG03516.hp2	intron_variant	MODIFIER	c.352-51T>C c.352-51T>C	BECN1	ENSG00000126581.13	transcript	ENST00000590099.6	protein_coding	5/11	chr17	42818731
chr17:42818943	T T	C C	1	a0001c0002t0001g0021 a0001c0002t0001g0021	3	HG02976.hp1 HG03540.hp1 HG06807.hp1 HG02976.hp1 HG03540.hp1 HG06807.hp1	intron_variant	MODIFIER	c.261-66A>G c.261-66A>G	BECN1	ENSG00000126581.13	transcript	ENST00000590099.6	protein_coding	4/11	chr17	42818943
chr17:42819126	C C	G G	5	a0001c0001t0001g0019 a0001c0001t0001g0042 a0001c0001t0001g0043 others(2): Show a0001c0001t0001g0019 a0001c0001t0001g0042 a0001c0001t0001g0043 a0001c0001t0001g0044 a0001c0001t0001g0087	7	HG02630.hp2 HG03098.hp2 HG03139.hp1 others(4): Show HG02630.hp2 HG03098.hp2 HG03139.hp1 HG03471.hp1 HG03516.hp1 HG04199.hp2 NA18906.hp2	intron_variant	MODIFIER	c.261-249G>C c.261-249G>C	BECN1	ENSG00000126581.13	transcript	ENST00000590099.6	protein_coding	4/11	chr17	42819126
chr17:42819212	C C	T T	1	a0001c0001t0001g0048 a0001c0001t0001g0048	1	HG01261.hp1 HG01261.hp1	intron_variant	MODIFIER	c.261-335G>A c.261-335G>A	BECN1	ENSG00000126581.13	transcript	ENST00000590099.6	protein_coding	4/11	chr17	42819212
chr17:42819395	G G	A A	1	a0001c0001t0001g0083 a0001c0001t0001g0083	1	HG00323.hp1 HG00323.hp1	intron_variant	MODIFIER	c.260+153C>T c.260+153C>T	BECN1	ENSG00000126581.13	transcript	ENST00000590099.6	protein_coding	4/11	chr17	42819395
chr17:42819470	T T	C C	1	a0001c0001t0001g0093 a0001c0001t0001g0093	1	NA19030.hp2 NA19030.hp2	intron_variant	MODIFIER	c.260+78A>G c.260+78A>G	BECN1	ENSG00000126581.13	transcript	ENST00000590099.6	protein_coding	4/11	chr17	42819470
chr17:42819480	G G	A A	1	a0001c0001t0001g0084 a0001c0001t0001g0084	1	HG03017.hp2 HG03017.hp2	intron_variant	MODIFIER	c.260+68C>T c.260+68C>T	BECN1	ENSG00000126581.13	transcript	ENST00000590099.6	protein_coding	4/11	chr17	42819480
chr17:42819654	G G	A A	1	a0001c0001t0002g0085 a0001c0001t0002g0085	1	HG01981.hp2 HG01981.hp2	intron_variant	MODIFIER	c.199-45C>T c.199-45C>T	BECN1	ENSG00000126581.13	transcript	ENST00000590099.6	protein_coding	3/11	chr17	42819654
chr17:42819752	C C	T T	4	a0001c0001t0001g0005 a0001c0001t0001g0007 a0001c0001t0001g0046 others(1): Show a0001c0001t0001g0005 a0001c0001t0001g0007 a0001c0001t0001g0046 a0001c0001t0001g0047	19	HG01109.hp1 HG01361.hp2 HG01496.hp1 others(16): Show HG01109.hp1 HG01361.hp2 HG01496.hp1 HG01943.hp1 HG01978.hp2 HG02004.hp1 HG02257.hp1 HG02273.hp1 HG02293.hp1 HG02559.hp1 HG02622.hp1 HG02622.hp2 HG02630.hp1 HG02965.hp1 HG02965.hp2 HG03225.hp1 HG04204.hp2 NA18522.hp2 NA19240.hp1	intron_variant	MODIFIER	c.199-143G>A c.199-143G>A	BECN1	ENSG00000126581.13	transcript	ENST00000590099.6	protein_coding	3/11	chr17	42819752
chr17:42819800	C C	T T	3	a0001c0001t0001g0019 a0001c0001t0001g0043 a0001c0001t0001g0044 a0001c0001t0001g0019 a0001c0001t0001g0043 a0001c0001t0001g0044	5	HG02630.hp2 HG03098.hp2 HG03139.hp1 others(2): Show HG02630.hp2 HG03098.hp2 HG03139.hp1 HG03516.hp1 NA18906.hp2	intron_variant	MODIFIER	c.199-191G>A c.199-191G>A	BECN1	ENSG00000126581.13	transcript	ENST00000590099.6	protein_coding	3/11	chr17	42819800
chr17:42819841	G G	A A	3	a0001c0001t0001g0019 a0001c0001t0001g0043 a0001c0001t0001g0044 a0001c0001t0001g0019 a0001c0001t0001g0043 a0001c0001t0001g0044	5	HG02630.hp2 HG03098.hp2 HG03139.hp1 others(2): Show HG02630.hp2 HG03098.hp2 HG03139.hp1 HG03516.hp1 NA18906.hp2	intron_variant	MODIFIER	c.199-232C>T c.199-232C>T	BECN1	ENSG00000126581.13	transcript	ENST00000590099.6	protein_coding	3/11	chr17	42819841
chr17:42819848	C C	T T	1	a0001c0001t0001g0036 a0001c0001t0001g0036	1	NA19043.hp2 NA19043.hp2	intron_variant	MODIFIER	c.199-239G>A c.199-239G>A	BECN1	ENSG00000126581.13	transcript	ENST00000590099.6	protein_coding	3/11	chr17	42819848
chr17:42819976	C C	G G	5	a0001c0001t0003g0006 a0001c0001t0003g0023 a0001c0001t0003g0089 others(2): Show a0001c0001t0003g0006 a0001c0001t0003g0023 a0001c0001t0003g0089 a0001c0001t0003g0090 a0001c0001t0003g0091	13	HG02132.hp2 HG02145.hp1 HG02486.hp1 others(10): Show HG02132.hp2 HG02145.hp1 HG02486.hp1 HG03704.hp2 HG03831.hp1 HG03927.hp1 HG04228.hp2 NA18948.hp1 NA18963.hp2 NA18977.hp1 NA18989.hp1 NA19010.hp1 NA19087.hp1	intron_variant	MODIFIER	c.199-367G>C c.199-367G>C	BECN1	ENSG00000126581.13	transcript	ENST00000590099.6	protein_coding	3/11	chr17	42819976
chr17:42820166	T T	C C	1	a0001c0001t0001g0044 a0001c0001t0001g0044	1	HG03139.hp1 HG03139.hp1	intron_variant	MODIFIER	c.199-557A>G c.199-557A>G	BECN1	ENSG00000126581.13	transcript	ENST00000590099.6	protein_coding	3/11	chr17	42820166
chr17:42820354	G G	A A	1	a0001c0001t0001g0086 a0001c0001t0001g0086	1	NA21309.hp1 NA21309.hp1	intron_variant	MODIFIER	c.198+420C>T c.198+420C>T	BECN1	ENSG00000126581.13	transcript	ENST00000590099.6	protein_coding	3/11	chr17	42820354
chr17:42820407	T T	C C	23	a0001c0001t0001g0010 a0001c0001t0001g0012 a0001c0001t0001g0019 others(20): Show a0001c0001t0001g0010 a0001c0001t0001g0012 a0001c0001t0001g0019 a0001c0001t0001g0020 a0001c0001t0001g0036 a0001c0001t0001g0037 a0001c0001t0001g0038 a0001c0001t0001g0039 a0001c0001t0001g0040 a0001c0001t0001g0042 a0001c0001t0001g0043 a0001c0001t0001g0044 a0001c0001t0001g0086 a0001c0001t0001g0087 a0001c0001t0001g0092 a0001c0001t0001g0093 a0001c0001t0001g0094 a0001c0001t0003g0006 a0001c0001t0003g0023 a0001c0001t0003g0089 a0001c0001t0003g0090 a0001c0001t0003g0091 a0001c0002t0001g0021	46	HG01109.hp2 HG01891.hp2 HG02055.hp1 others(43): Show HG01109.hp2 HG01891.hp2 HG02055.hp1 HG02132.hp2 HG02145.hp1 HG02486.hp1 HG02572.hp1 HG02630.hp2 HG02723.hp2 HG02809.hp1 HG02809.hp2 HG02886.hp1 HG02895.hp1 HG02896.hp2 HG02976.hp1 HG03041.hp1 HG03098.hp2 HG03139.hp1 HG03195.hp1 HG03209.hp1 HG03209.hp2 HG03225.hp2 HG03471.hp1 HG03486.hp2 HG03516.hp1 HG03540.hp1 HG03579.hp2 HG03704.hp2 HG03831.hp1 HG03927.hp1 HG04199.hp2 HG04228.hp2 HG06807.hp1 HG06807.hp2 NA18906.hp2 NA18948.hp1 NA18963.hp2 NA18977.hp1 NA18989.hp1 NA19010.hp1 NA19030.hp1 NA19030.hp2 NA19043.hp2 NA19087.hp1 NA19240.hp2 NA21309.hp1	intron_variant	MODIFIER	c.198+367A>G c.198+367A>G	BECN1	ENSG00000126581.13	transcript	ENST00000590099.6	protein_coding	3/11	chr17	42820407
chr17:42820651	C C	T T	23	a0001c0001t0001g0010 a0001c0001t0001g0012 a0001c0001t0001g0019 others(20): Show a0001c0001t0001g0010 a0001c0001t0001g0012 a0001c0001t0001g0019 a0001c0001t0001g0020 a0001c0001t0001g0036 a0001c0001t0001g0037 a0001c0001t0001g0038 a0001c0001t0001g0039 a0001c0001t0001g0040 a0001c0001t0001g0042 a0001c0001t0001g0043 a0001c0001t0001g0044 a0001c0001t0001g0086 a0001c0001t0001g0087 a0001c0001t0001g0092 a0001c0001t0001g0093 a0001c0001t0001g0094 a0001c0001t0003g0006 a0001c0001t0003g0023 a0001c0001t0003g0089 a0001c0001t0003g0090 a0001c0001t0003g0091 a0001c0002t0001g0021	46	HG01109.hp2 HG01891.hp2 HG02055.hp1 others(43): Show HG01109.hp2 HG01891.hp2 HG02055.hp1 HG02132.hp2 HG02145.hp1 HG02486.hp1 HG02572.hp1 HG02630.hp2 HG02723.hp2 HG02809.hp1 HG02809.hp2 HG02886.hp1 HG02895.hp1 HG02896.hp2 HG02976.hp1 HG03041.hp1 HG03098.hp2 HG03139.hp1 HG03195.hp1 HG03209.hp1 HG03209.hp2 HG03225.hp2 HG03471.hp1 HG03486.hp2 HG03516.hp1 HG03540.hp1 HG03579.hp2 HG03704.hp2 HG03831.hp1 HG03927.hp1 HG04199.hp2 HG04228.hp2 HG06807.hp1 HG06807.hp2 NA18906.hp2 NA18948.hp1 NA18963.hp2 NA18977.hp1 NA18989.hp1 NA19010.hp1 NA19030.hp1 NA19030.hp2 NA19043.hp2 NA19087.hp1 NA19240.hp2 NA21309.hp1	intron_variant	MODIFIER	c.198+123G>A c.198+123G>A	BECN1	ENSG00000126581.13	transcript	ENST00000590099.6	protein_coding	3/11	chr17	42820651
chr17:42820994	C C	T T	1	a0001c0002t0001g0021 a0001c0002t0001g0021	3	HG02976.hp1 HG03540.hp1 HG06807.hp1 HG02976.hp1 HG03540.hp1 HG06807.hp1	intron_variant	MODIFIER	c.131-153G>A c.131-153G>A	BECN1	ENSG00000126581.13	transcript	ENST00000590099.6	protein_coding	2/11	chr17	42820994
chr17:42821052	CATT CATT	C C	1	a0001c0001t0001g0020 a0001c0001t0001g0020	3	HG02809.hp1 HG06807.hp2 NA19240.hp2 HG02809.hp1 HG06807.hp2 NA19240.hp2	intron_variant	MODIFIER	c.131-214_131-212del others(3): Show c.131-214_131-212delAAT	BECN1	ENSG00000126581.13	transcript	ENST00000590099.6	protein_coding	2/11	chr17	42821052
chr17:42821288	C C	T T	1	a0001c0001t0001g0020 a0001c0001t0001g0020	3	HG02809.hp1 HG06807.hp2 NA19240.hp2 HG02809.hp1 HG06807.hp2 NA19240.hp2	intron_variant	MODIFIER	c.131-447G>A c.131-447G>A	BECN1	ENSG00000126581.13	transcript	ENST00000590099.6	protein_coding	2/11	chr17	42821288
chr17:42821455	A A	G G	1	a0001c0001t0001g0042 a0001c0001t0001g0042	1	HG03471.hp1 HG03471.hp1	intron_variant	MODIFIER	c.131-614T>C c.131-614T>C	BECN1	ENSG00000126581.13	transcript	ENST00000590099.6	protein_coding	2/11	chr17	42821455
chr17:42821715	T T	C C	2	a0001c0001t0001g0010 a0001c0001t0001g0086 a0001c0001t0001g0010 a0001c0001t0001g0086	7	HG01891.hp2 HG02723.hp2 HG02895.hp1 others(4): Show HG01891.hp2 HG02723.hp2 HG02895.hp1 HG02896.hp2 HG03195.hp1 NA19030.hp1 NA21309.hp1	intron_variant	MODIFIER	c.131-874A>G c.131-874A>G	BECN1	ENSG00000126581.13	transcript	ENST00000590099.6	protein_coding	2/11	chr17	42821715
chr17:42821736	A A	C C	1	a0001c0001t0002g0045 a0001c0001t0002g0045	1	NA19054.hp1 NA19054.hp1	intron_variant	MODIFIER	c.131-895T>G c.131-895T>G	BECN1	ENSG00000126581.13	transcript	ENST00000590099.6	protein_coding	2/11	chr17	42821736
chr17:42821977	C C	T T	1	a0001c0001t0001g0020 a0001c0001t0001g0020	3	HG02809.hp1 HG06807.hp2 NA19240.hp2 HG02809.hp1 HG06807.hp2 NA19240.hp2	intron_variant	MODIFIER	c.131-1136G>A c.131-1136G>A	BECN1	ENSG00000126581.13	transcript	ENST00000590099.6	protein_coding	2/11	chr17	42821977
chr17:42822116	T T	C C	1	a0001c0001t0001g0035 a0001c0001t0001g0035	2	HG01975.hp1 HG01981.hp1 HG01975.hp1 HG01981.hp1	intron_variant	MODIFIER	c.131-1275A>G c.131-1275A>G	BECN1	ENSG00000126581.13	transcript	ENST00000590099.6	protein_coding	2/11	chr17	42822116
chr17:42822217	A A	C C	5	a0001c0001t0003g0006 a0001c0001t0003g0023 a0001c0001t0003g0089 others(2): Show a0001c0001t0003g0006 a0001c0001t0003g0023 a0001c0001t0003g0089 a0001c0001t0003g0090 a0001c0001t0003g0091	13	HG02132.hp2 HG02145.hp1 HG02486.hp1 others(10): Show HG02132.hp2 HG02145.hp1 HG02486.hp1 HG03704.hp2 HG03831.hp1 HG03927.hp1 HG04228.hp2 NA18948.hp1 NA18963.hp2 NA18977.hp1 NA18989.hp1 NA19010.hp1 NA19087.hp1	intron_variant	MODIFIER	c.131-1376T>G c.131-1376T>G	BECN1	ENSG00000126581.13	transcript	ENST00000590099.6	protein_coding	2/11	chr17	42822217
chr17:42822243	A A	G G	3	a0001c0001t0001g0019 a0001c0001t0001g0043 a0001c0001t0001g0044 a0001c0001t0001g0019 a0001c0001t0001g0043 a0001c0001t0001g0044	5	HG02630.hp2 HG03098.hp2 HG03139.hp1 others(2): Show HG02630.hp2 HG03098.hp2 HG03139.hp1 HG03516.hp1 NA18906.hp2	intron_variant	MODIFIER	c.131-1402T>C c.131-1402T>C	BECN1	ENSG00000126581.13	transcript	ENST00000590099.6	protein_coding	2/11	chr17	42822243
chr17:42822552	G G	A A	1	a0001c0001t0001g0087 a0001c0001t0001g0087	1	HG04199.hp2 HG04199.hp2	intron_variant	MODIFIER	c.130+1196C>T c.130+1196C>T	BECN1	ENSG00000126581.13	transcript	ENST00000590099.6	protein_coding	2/11	chr17	42822552
chr17:42822560	G G	A A	1	a0001c0001t0002g0088 a0001c0001t0002g0088	1	HG00621.hp1 HG00621.hp1	intron_variant	MODIFIER	c.130+1188C>T c.130+1188C>T	BECN1	ENSG00000126581.13	transcript	ENST00000590099.6	protein_coding	2/11	chr17	42822560
chr17:42822847	AT AT	A A	5	a0001c0001t0003g0006 a0001c0001t0003g0023 a0001c0001t0003g0089 others(2): Show a0001c0001t0003g0006 a0001c0001t0003g0023 a0001c0001t0003g0089 a0001c0001t0003g0090 a0001c0001t0003g0091	13	HG02132.hp2 HG02145.hp1 HG02486.hp1 others(10): Show HG02132.hp2 HG02145.hp1 HG02486.hp1 HG03704.hp2 HG03831.hp1 HG03927.hp1 HG04228.hp2 NA18948.hp1 NA18963.hp2 NA18977.hp1 NA18989.hp1 NA19010.hp1 NA19087.hp1	intron_variant	MODIFIER	c.130+900delA c.130+900delA	BECN1	ENSG00000126581.13	transcript	ENST00000590099.6	protein_coding	2/11	chr17	42822847
chr17:42822918	C C	T T	1	a0001c0001t0001g0042 a0001c0001t0001g0042	1	HG03471.hp1 HG03471.hp1	intron_variant	MODIFIER	c.130+830G>A c.130+830G>A	BECN1	ENSG00000126581.13	transcript	ENST00000590099.6	protein_coding	2/11	chr17	42822918
chr17:42823023	G G	A A	2	a0001c0001t0001g0092 a0001c0001t0001g0093 a0001c0001t0001g0092 a0001c0001t0001g0093	2	HG02055.hp1 NA19030.hp2 HG02055.hp1 NA19030.hp2	intron_variant	MODIFIER	c.130+725C>T c.130+725C>T	BECN1	ENSG00000126581.13	transcript	ENST00000590099.6	protein_coding	2/11	chr17	42823023
chr17:42823046	C C	A A	1	a0001c0001t0001g0094 a0001c0001t0001g0094	1	HG03209.hp2 HG03209.hp2	intron_variant	MODIFIER	c.130+702G>T c.130+702G>T	BECN1	ENSG00000126581.13	transcript	ENST00000590099.6	protein_coding	2/11	chr17	42823046
chr17:42823246	T T	G G	1	a0001c0001t0001g0011 a0001c0001t0001g0011	6	HG01070.hp2 HG01175.hp1 HG01255.hp1 others(3): Show HG01070.hp2 HG01175.hp1 HG01255.hp1 HG01975.hp2 HG02080.hp2 HG02300.hp1	intron_variant	MODIFIER	c.130+502A>C c.130+502A>C	BECN1	ENSG00000126581.13	transcript	ENST00000590099.6	protein_coding	2/11	chr17	42823246
chr17:42823543	C C	T T	1	a0001c0001t0001g0042 a0001c0001t0001g0042	1	HG03471.hp1 HG03471.hp1	intron_variant	MODIFIER	c.130+205G>A c.130+205G>A	BECN1	ENSG00000126581.13	transcript	ENST00000590099.6	protein_coding	2/11	chr17	42823543
chr17:42823697	C C	G G	5	a0001c0001t0001g0012 a0001c0001t0001g0036 a0001c0001t0001g0037 others(2): Show a0001c0001t0001g0012 a0001c0001t0001g0036 a0001c0001t0001g0037 a0001c0001t0001g0038 a0001c0001t0001g0039	9	HG01109.hp2 HG02572.hp1 HG02886.hp1 others(6): Show HG01109.hp2 HG02572.hp1 HG02886.hp1 HG03041.hp1 HG03209.hp1 HG03225.hp2 HG03486.hp2 HG03579.hp2 NA19043.hp2	intron_variant	MODIFIER	c.130+51G>C c.130+51G>C	BECN1	ENSG00000126581.13	transcript	ENST00000590099.6	protein_coding	2/11	chr17	42823697
chr17:42823952	C C	T T	1	a0001c0001t0001g0041 a0001c0001t0001g0041	1	HG03654.hp2 HG03654.hp2	intron_variant	MODIFIER	c.-2-73G>A c.-2-73G>A	BECN1	ENSG00000126581.13	transcript	ENST00000590099.6	protein_coding	1/11	chr17	42823952
chr17:42823982	C C	G G	6	a0001c0001t0001g0012 a0001c0001t0001g0036 a0001c0001t0001g0037 others(3): Show a0001c0001t0001g0012 a0001c0001t0001g0036 a0001c0001t0001g0037 a0001c0001t0001g0038 a0001c0001t0001g0039 a0001c0001t0001g0040	10	HG01109.hp2 HG02572.hp1 HG02809.hp2 others(7): Show HG01109.hp2 HG02572.hp1 HG02809.hp2 HG02886.hp1 HG03041.hp1 HG03209.hp1 HG03225.hp2 HG03486.hp2 HG03579.hp2 NA19043.hp2	intron_variant	MODIFIER	c.-2-103G>C c.-2-103G>C	BECN1	ENSG00000126581.13	transcript	ENST00000590099.6	protein_coding	1/11	chr17	42823982

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🧬 Gene Summary

AAmino acid(protein) Level Haplotype Info (Total: 2)

CCoding Level Haplotype Info (Total: 4)

TTranscript Level Haplotype Info (Total: 6)

GGenebody Level Haplotype Info (Total: 96)

A C AC Level (Amino Acid + Coding) Haplotype Info (Total: 4)

A C T ACT Level (Amino Acid + Coding + Transcript) Haplotype Info (Total: 9)

A C T G ACTG Level (Amino Acid + Coding + Transcript + Genebody) Haplotype Info (Total: 96)

Haplotype Details by Sample (Haploid Level) (Total: 274)

AAmino acid(protein) Level Haplotype Related Variants (Effect to Protein Coding Variants) (Total: 1)

CCoding Level Variants (Synonymous Mutations) (Total: 2)

TTranscript Level Haplotype Variants (5'UTR+3'UTR) (Total: 5)

GGenebody Level Haplotype Variants (Intron) (Total: 103)

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Annotation (Repeats)

Annotation (SNP Array)