Joint Open Genome and Omics Platform (JoGo)

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geneid	548644
ensemblid	ENSG00000285437.2
hgncid	33853
symbol	POLR2J3
name	RNA polymerase II subunit J3
refseq_nuc	NM_001097615.3
refseq_prot	NP_001091084.2
ensembl_nuc	ENST00000621093.5
ensembl_prot	ENSP00000483328.1
mane_status	MANE Select
chr	chr7
start	102566966
end	102572583
strand	-
ver	v1.2
region	chr7:102566966-102572583
region5000	chr7:102561966-102577583
regionname0	POLR2J3_chr7_102566966_102572583
regionname5000	POLR2J3_chr7_102561966_102577583

ahapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	alen	total	AFR	AMR	EAS	SAS	JPT	regionname	genename	aa	chr	start	end
a0001	0/0	115	24	4	2	16	2	15	POLR2J3_chr7_102561966_102577583	POLR2J3	copy fasta	chr7	102561966	102577583
a0002	0/0	115	18	0	1	17	0	16	POLR2J3_chr7_102561966_102577583	POLR2J3	copy fasta	chr7	102561966	102577583
a0003	0/0	115	16	0	1	14	1	14	POLR2J3_chr7_102561966_102577583	POLR2J3	copy fasta	chr7	102561966	102577583
a0004	0/0	115	5	0	0	4	1	4	POLR2J3_chr7_102561966_102577583	POLR2J3	copy fasta	chr7	102561966	102577583
a0005	0/0	115	4	0	0	4	0	4	POLR2J3_chr7_102561966_102577583	POLR2J3	copy fasta	chr7	102561966	102577583
a0006	0/0	115	1	0	0	1	0	1	POLR2J3_chr7_102561966_102577583	POLR2J3	copy fasta	chr7	102561966	102577583

chapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	clen	total	AFR	AMR	EAS	SAS	regionname	genename	cseq	chr	start	end
c0001	0/0	348	16	0	1	14	1	POLR2J3_chr7_102561966_102577583	POLR2J3	copy fasta	chr7	102561966	102577583
c0002	0/0	348	14	1	1	10	2	POLR2J3_chr7_102561966_102577583	POLR2J3	copy fasta	chr7	102561966	102577583
c0003	0/0	348	13	0	1	12	0	POLR2J3_chr7_102561966_102577583	POLR2J3	copy fasta	chr7	102561966	102577583
c0004	0/0	348	5	0	0	5	0	POLR2J3_chr7_102561966_102577583	POLR2J3	copy fasta	chr7	102561966	102577583
c0005	0/0	348	5	0	0	4	1	POLR2J3_chr7_102561966_102577583	POLR2J3	copy fasta	chr7	102561966	102577583
c0006	0/0	348	4	2	0	2	0	POLR2J3_chr7_102561966_102577583	POLR2J3	copy fasta	chr7	102561966	102577583
c0007	0/0	348	4	1	0	3	0	POLR2J3_chr7_102561966_102577583	POLR2J3	copy fasta	chr7	102561966	102577583
c0008	0/0	348	4	0	0	4	0	POLR2J3_chr7_102561966_102577583	POLR2J3	copy fasta	chr7	102561966	102577583
c0009	0/0	348	1	0	0	1	0	POLR2J3_chr7_102561966_102577583	POLR2J3	copy fasta	chr7	102561966	102577583
c0010	0/0	348	1	0	0	1	0	POLR2J3_chr7_102561966_102577583	POLR2J3	copy fasta	chr7	102561966	102577583
c0011	0/0	348	1	0	1	0	0	POLR2J3_chr7_102561966_102577583	POLR2J3	copy fasta	chr7	102561966	102577583

thapid	grch38 chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	tlen	total	AFR	AMR	EAS	SAS	regionname	genename	tseq	chr	start	end
t0001	0/0	148	40	3	2	32	3	POLR2J3_chr7_102561966_102577583	POLR2J3	copy fasta	chr7	102561966	102577583
t0002	0/0	148	22	1	1	19	1	POLR2J3_chr7_102561966_102577583	POLR2J3	copy fasta	chr7	102561966	102577583
t0003	0/0	148	5	0	0	5	0	POLR2J3_chr7_102561966_102577583	POLR2J3	copy fasta	chr7	102561966	102577583
t0004	0/0	148	1	0	1	0	0	POLR2J3_chr7_102561966_102577583	POLR2J3	copy fasta	chr7	102561966	102577583

ghapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	total	AFR	AMR	EAS	SAS	regionname	genename	chr	start	end
g0001	0/0	7	0	1	5	1	POLR2J3_chr7_102561966_102577583	POLR2J3	chr7	102561966	102577583
g0002	0/0	5	0	0	5	0	POLR2J3_chr7_102561966_102577583	POLR2J3	chr7	102561966	102577583
g0003	0/0	4	0	0	4	0	POLR2J3_chr7_102561966_102577583	POLR2J3	chr7	102561966	102577583
g0004	0/0	4	0	0	4	0	POLR2J3_chr7_102561966_102577583	POLR2J3	chr7	102561966	102577583
g0005	0/0	3	0	0	3	0	POLR2J3_chr7_102561966_102577583	POLR2J3	chr7	102561966	102577583
g0006	0/0	3	0	1	2	0	POLR2J3_chr7_102561966_102577583	POLR2J3	chr7	102561966	102577583
g0007	0/0	3	0	0	2	1	POLR2J3_chr7_102561966_102577583	POLR2J3	chr7	102561966	102577583
g0008	0/0	3	0	0	3	0	POLR2J3_chr7_102561966_102577583	POLR2J3	chr7	102561966	102577583
g0009	0/0	2	0	0	1	1	POLR2J3_chr7_102561966_102577583	POLR2J3	chr7	102561966	102577583
g0010	0/0	2	0	0	2	0	POLR2J3_chr7_102561966_102577583	POLR2J3	chr7	102561966	102577583
g0011	0/0	2	0	0	2	0	POLR2J3_chr7_102561966_102577583	POLR2J3	chr7	102561966	102577583
g0012	0/0	1	0	0	1	0	POLR2J3_chr7_102561966_102577583	POLR2J3	chr7	102561966	102577583
g0013	0/0	1	0	0	1	0	POLR2J3_chr7_102561966_102577583	POLR2J3	chr7	102561966	102577583
g0014	0/0	1	0	0	1	0	POLR2J3_chr7_102561966_102577583	POLR2J3	chr7	102561966	102577583
g0015	0/0	1	0	0	1	0	POLR2J3_chr7_102561966_102577583	POLR2J3	chr7	102561966	102577583
g0016	0/0	1	0	0	1	0	POLR2J3_chr7_102561966_102577583	POLR2J3	chr7	102561966	102577583
g0017	0/0	1	0	0	1	0	POLR2J3_chr7_102561966_102577583	POLR2J3	chr7	102561966	102577583
g0018	0/0	1	1	0	0	0	POLR2J3_chr7_102561966_102577583	POLR2J3	chr7	102561966	102577583
g0019	0/0	1	0	0	1	0	POLR2J3_chr7_102561966_102577583	POLR2J3	chr7	102561966	102577583
g0020	0/0	1	0	0	1	0	POLR2J3_chr7_102561966_102577583	POLR2J3	chr7	102561966	102577583
g0021	0/0	1	0	0	1	0	POLR2J3_chr7_102561966_102577583	POLR2J3	chr7	102561966	102577583
g0022	0/0	1	0	0	0	1	POLR2J3_chr7_102561966_102577583	POLR2J3	chr7	102561966	102577583
g0023	0/0	1	1	0	0	0	POLR2J3_chr7_102561966_102577583	POLR2J3	chr7	102561966	102577583
g0024	0/0	1	0	1	0	0	POLR2J3_chr7_102561966_102577583	POLR2J3	chr7	102561966	102577583
g0025	0/0	1	1	0	0	0	POLR2J3_chr7_102561966_102577583	POLR2J3	chr7	102561966	102577583
g0026	0/0	1	0	0	1	0	POLR2J3_chr7_102561966_102577583	POLR2J3	chr7	102561966	102577583
g0027	0/0	1	0	0	1	0	POLR2J3_chr7_102561966_102577583	POLR2J3	chr7	102561966	102577583
g0028	0/0	1	0	0	1	0	POLR2J3_chr7_102561966_102577583	POLR2J3	chr7	102561966	102577583
g0029	0/0	1	0	0	1	0	POLR2J3_chr7_102561966_102577583	POLR2J3	chr7	102561966	102577583
g0030	0/0	1	0	0	1	0	POLR2J3_chr7_102561966_102577583	POLR2J3	chr7	102561966	102577583
g0031	0/0	1	0	0	1	0	POLR2J3_chr7_102561966_102577583	POLR2J3	chr7	102561966	102577583
g0032	0/0	1	0	0	1	0	POLR2J3_chr7_102561966_102577583	POLR2J3	chr7	102561966	102577583
g0033	0/0	1	1	0	0	0	POLR2J3_chr7_102561966_102577583	POLR2J3	chr7	102561966	102577583
g0034	0/0	1	0	0	1	0	POLR2J3_chr7_102561966_102577583	POLR2J3	chr7	102561966	102577583
g0035	0/0	1	0	0	1	0	POLR2J3_chr7_102561966_102577583	POLR2J3	chr7	102561966	102577583
g0036	0/0	1	0	0	1	0	POLR2J3_chr7_102561966_102577583	POLR2J3	chr7	102561966	102577583
g0037	0/0	1	0	0	1	0	POLR2J3_chr7_102561966_102577583	POLR2J3	chr7	102561966	102577583
g0038	0/0	1	0	0	1	0	POLR2J3_chr7_102561966_102577583	POLR2J3	chr7	102561966	102577583
g0039	0/0	1	0	0	1	0	POLR2J3_chr7_102561966_102577583	POLR2J3	chr7	102561966	102577583
g0040	0/0	1	0	0	1	0	POLR2J3_chr7_102561966_102577583	POLR2J3	chr7	102561966	102577583
g0041	0/0	1	0	1	0	0	POLR2J3_chr7_102561966_102577583	POLR2J3	chr7	102561966	102577583

achapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	clen	total	AFR	AMR	EAS	SAS	regionname	genename	cseq	chr	start	end
a0001c0002	0/0	348	14	1	1	10	2	POLR2J3_chr7_102561966_102577583	POLR2J3	copy fasta	chr7	102561966	102577583
a0001c0006	0/0	348	4	2	0	2	0	POLR2J3_chr7_102561966_102577583	POLR2J3	copy fasta	chr7	102561966	102577583
a0001c0007	0/0	348	4	1	0	3	0	POLR2J3_chr7_102561966_102577583	POLR2J3	copy fasta	chr7	102561966	102577583
a0001c0010	0/0	348	1	0	0	1	0	POLR2J3_chr7_102561966_102577583	POLR2J3	copy fasta	chr7	102561966	102577583
a0001c0011	0/0	348	1	0	1	0	0	POLR2J3_chr7_102561966_102577583	POLR2J3	copy fasta	chr7	102561966	102577583
a0002c0003	0/0	348	13	0	1	12	0	POLR2J3_chr7_102561966_102577583	POLR2J3	copy fasta	chr7	102561966	102577583
a0002c0004	0/0	348	5	0	0	5	0	POLR2J3_chr7_102561966_102577583	POLR2J3	copy fasta	chr7	102561966	102577583
a0003c0001	0/0	348	16	0	1	14	1	POLR2J3_chr7_102561966_102577583	POLR2J3	copy fasta	chr7	102561966	102577583
a0004c0005	0/0	348	5	0	0	4	1	POLR2J3_chr7_102561966_102577583	POLR2J3	copy fasta	chr7	102561966	102577583
a0005c0008	0/0	348	4	0	0	4	0	POLR2J3_chr7_102561966_102577583	POLR2J3	copy fasta	chr7	102561966	102577583
a0006c0009	0/0	348	1	0	0	1	0	POLR2J3_chr7_102561966_102577583	POLR2J3	copy fasta	chr7	102561966	102577583

acthapid	grch38 chm13v2	tlen	total	AFR	AMR	EAS	SAS	regionname	genename	tseq	chr	start	end
a0001c0002t0001	0/0	495	14	1	1	10	2	POLR2J3_chr7_102561966_102577583	POLR2J3	copy fasta	chr7	102561966	102577583
a0001c0006t0001	0/0	495	1	1	0	0	0	POLR2J3_chr7_102561966_102577583	POLR2J3	copy fasta	chr7	102561966	102577583
a0001c0006t0002	0/0	495	1	1	0	0	0	POLR2J3_chr7_102561966_102577583	POLR2J3	copy fasta	chr7	102561966	102577583
a0001c0006t0003	0/0	495	2	0	0	2	0	POLR2J3_chr7_102561966_102577583	POLR2J3	copy fasta	chr7	102561966	102577583
a0001c0007t0001	0/0	495	1	1	0	0	0	POLR2J3_chr7_102561966_102577583	POLR2J3	copy fasta	chr7	102561966	102577583
a0001c0007t0002	0/0	495	3	0	0	3	0	POLR2J3_chr7_102561966_102577583	POLR2J3	copy fasta	chr7	102561966	102577583
a0001c0010t0003	0/0	495	1	0	0	1	0	POLR2J3_chr7_102561966_102577583	POLR2J3	copy fasta	chr7	102561966	102577583
a0001c0011t0004	0/0	495	1	0	1	0	0	POLR2J3_chr7_102561966_102577583	POLR2J3	copy fasta	chr7	102561966	102577583
a0002c0003t0001	0/0	495	11	0	1	10	0	POLR2J3_chr7_102561966_102577583	POLR2J3	copy fasta	chr7	102561966	102577583
a0002c0003t0002	0/0	495	2	0	0	2	0	POLR2J3_chr7_102561966_102577583	POLR2J3	copy fasta	chr7	102561966	102577583
a0002c0004t0001	0/0	495	5	0	0	5	0	POLR2J3_chr7_102561966_102577583	POLR2J3	copy fasta	chr7	102561966	102577583
a0003c0001t0002	0/0	495	16	0	1	14	1	POLR2J3_chr7_102561966_102577583	POLR2J3	copy fasta	chr7	102561966	102577583
a0004c0005t0001	0/0	495	3	0	0	2	1	POLR2J3_chr7_102561966_102577583	POLR2J3	copy fasta	chr7	102561966	102577583
a0004c0005t0003	0/0	495	2	0	0	2	0	POLR2J3_chr7_102561966_102577583	POLR2J3	copy fasta	chr7	102561966	102577583
a0005c0008t0001	0/0	495	4	0	0	4	0	POLR2J3_chr7_102561966_102577583	POLR2J3	copy fasta	chr7	102561966	102577583
a0006c0009t0001	0/0	495	1	0	0	1	0	POLR2J3_chr7_102561966_102577583	POLR2J3	copy fasta	chr7	102561966	102577583

actghapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	total	AFR	AMR	EAS	SAS	regionname	genename	chr	start	end
a0001c0002t0001g0006	0/0	3	0	1	2	0	POLR2J3_chr7_102561966_102577583	POLR2J3	chr7	102561966	102577583
a0001c0002t0001g0007	0/0	3	0	0	2	1	POLR2J3_chr7_102561966_102577583	POLR2J3	chr7	102561966	102577583
a0001c0002t0001g0008	0/0	3	0	0	3	0	POLR2J3_chr7_102561966_102577583	POLR2J3	chr7	102561966	102577583
a0001c0002t0001g0019	0/0	1	0	0	1	0	POLR2J3_chr7_102561966_102577583	POLR2J3	chr7	102561966	102577583
a0001c0002t0001g0020	0/0	1	0	0	1	0	POLR2J3_chr7_102561966_102577583	POLR2J3	chr7	102561966	102577583
a0001c0002t0001g0022	0/0	1	0	0	0	1	POLR2J3_chr7_102561966_102577583	POLR2J3	chr7	102561966	102577583
a0001c0002t0001g0025	0/0	1	1	0	0	0	POLR2J3_chr7_102561966_102577583	POLR2J3	chr7	102561966	102577583
a0001c0002t0001g0028	0/0	1	0	0	1	0	POLR2J3_chr7_102561966_102577583	POLR2J3	chr7	102561966	102577583
a0001c0006t0001g0033	0/0	1	1	0	0	0	POLR2J3_chr7_102561966_102577583	POLR2J3	chr7	102561966	102577583
a0001c0006t0002g0018	0/0	1	1	0	0	0	POLR2J3_chr7_102561966_102577583	POLR2J3	chr7	102561966	102577583
a0001c0006t0003g0011	0/0	2	0	0	2	0	POLR2J3_chr7_102561966_102577583	POLR2J3	chr7	102561966	102577583
a0001c0007t0001g0023	0/0	1	1	0	0	0	POLR2J3_chr7_102561966_102577583	POLR2J3	chr7	102561966	102577583
a0001c0007t0002g0005	0/0	3	0	0	3	0	POLR2J3_chr7_102561966_102577583	POLR2J3	chr7	102561966	102577583
a0001c0010t0003g0038	0/0	1	0	0	1	0	POLR2J3_chr7_102561966_102577583	POLR2J3	chr7	102561966	102577583
a0001c0011t0004g0041	0/0	1	0	1	0	0	POLR2J3_chr7_102561966_102577583	POLR2J3	chr7	102561966	102577583
a0002c0003t0001g0003	0/0	4	0	0	4	0	POLR2J3_chr7_102561966_102577583	POLR2J3	chr7	102561966	102577583
a0002c0003t0001g0004	0/0	4	0	0	4	0	POLR2J3_chr7_102561966_102577583	POLR2J3	chr7	102561966	102577583
a0002c0003t0001g0021	0/0	1	0	0	1	0	POLR2J3_chr7_102561966_102577583	POLR2J3	chr7	102561966	102577583
a0002c0003t0001g0024	0/0	1	0	1	0	0	POLR2J3_chr7_102561966_102577583	POLR2J3	chr7	102561966	102577583
a0002c0003t0001g0026	0/0	1	0	0	1	0	POLR2J3_chr7_102561966_102577583	POLR2J3	chr7	102561966	102577583
a0002c0003t0002g0012	0/0	1	0	0	1	0	POLR2J3_chr7_102561966_102577583	POLR2J3	chr7	102561966	102577583
a0002c0003t0002g0013	0/0	1	0	0	1	0	POLR2J3_chr7_102561966_102577583	POLR2J3	chr7	102561966	102577583
a0002c0004t0001g0010	0/0	2	0	0	2	0	POLR2J3_chr7_102561966_102577583	POLR2J3	chr7	102561966	102577583
a0002c0004t0001g0029	0/0	1	0	0	1	0	POLR2J3_chr7_102561966_102577583	POLR2J3	chr7	102561966	102577583
a0002c0004t0001g0030	0/0	1	0	0	1	0	POLR2J3_chr7_102561966_102577583	POLR2J3	chr7	102561966	102577583
a0002c0004t0001g0032	0/0	1	0	0	1	0	POLR2J3_chr7_102561966_102577583	POLR2J3	chr7	102561966	102577583
a0003c0001t0002g0001	0/0	7	0	1	5	1	POLR2J3_chr7_102561966_102577583	POLR2J3	chr7	102561966	102577583
a0003c0001t0002g0002	0/0	5	0	0	5	0	POLR2J3_chr7_102561966_102577583	POLR2J3	chr7	102561966	102577583
a0003c0001t0002g0014	0/0	1	0	0	1	0	POLR2J3_chr7_102561966_102577583	POLR2J3	chr7	102561966	102577583
a0003c0001t0002g0015	0/0	1	0	0	1	0	POLR2J3_chr7_102561966_102577583	POLR2J3	chr7	102561966	102577583
a0003c0001t0002g0016	0/0	1	0	0	1	0	POLR2J3_chr7_102561966_102577583	POLR2J3	chr7	102561966	102577583
a0003c0001t0002g0017	0/0	1	0	0	1	0	POLR2J3_chr7_102561966_102577583	POLR2J3	chr7	102561966	102577583
a0004c0005t0001g0009	0/0	2	0	0	1	1	POLR2J3_chr7_102561966_102577583	POLR2J3	chr7	102561966	102577583
a0004c0005t0001g0027	0/0	1	0	0	1	0	POLR2J3_chr7_102561966_102577583	POLR2J3	chr7	102561966	102577583
a0004c0005t0003g0039	0/0	1	0	0	1	0	POLR2J3_chr7_102561966_102577583	POLR2J3	chr7	102561966	102577583
a0004c0005t0003g0040	0/0	1	0	0	1	0	POLR2J3_chr7_102561966_102577583	POLR2J3	chr7	102561966	102577583
a0005c0008t0001g0034	0/0	1	0	0	1	0	POLR2J3_chr7_102561966_102577583	POLR2J3	chr7	102561966	102577583
a0005c0008t0001g0035	0/0	1	0	0	1	0	POLR2J3_chr7_102561966_102577583	POLR2J3	chr7	102561966	102577583
a0005c0008t0001g0036	0/0	1	0	0	1	0	POLR2J3_chr7_102561966_102577583	POLR2J3	chr7	102561966	102577583
a0005c0008t0001g0037	0/0	1	0	0	1	0	POLR2J3_chr7_102561966_102577583	POLR2J3	chr7	102561966	102577583
a0006c0009t0001g0031	0/0	1	0	0	1	0	POLR2J3_chr7_102561966_102577583	POLR2J3	chr7	102561966	102577583

sampleid	ID haplotypeid	ahapid	chapid	thapid	ghapid	gpopname	popname	regionname	genename	chr	start	end
HG00558	hp1	a0002	c0003	t0001	g0003	EAS	CHS	POLR2J3_chr7_102561966_102577583	POLR2J3	chr7	102561966	102577583
HG00558	hp2	a0001	c0002	t0001	g0020	EAS	CHS	POLR2J3_chr7_102561966_102577583	POLR2J3	chr7	102561966	102577583
HG01255	hp1	a0001	c0011	t0004	g0041	AMR	CLM	POLR2J3_chr7_102561966_102577583	POLR2J3	chr7	102561966	102577583
HG01255	hp2	a0003	c0001	t0002	g0001	AMR	CLM	POLR2J3_chr7_102561966_102577583	POLR2J3	chr7	102561966	102577583
HG01928	hp1	a0002	c0003	t0001	g0024	AMR	PEL	POLR2J3_chr7_102561966_102577583	POLR2J3	chr7	102561966	102577583
HG01928	hp2	a0001	c0002	t0001	g0006	AMR	PEL	POLR2J3_chr7_102561966_102577583	POLR2J3	chr7	102561966	102577583
HG03041	hp1	a0001	c0007	t0001	g0023	AFR	GWD	POLR2J3_chr7_102561966_102577583	POLR2J3	chr7	102561966	102577583
HG03041	hp2	a0001	c0002	t0001	g0025	AFR	GWD	POLR2J3_chr7_102561966_102577583	POLR2J3	chr7	102561966	102577583
HG03579	hp1	a0001	c0006	t0002	g0018	AFR	MSL	POLR2J3_chr7_102561966_102577583	POLR2J3	chr7	102561966	102577583
HG03579	hp2	a0001	c0006	t0001	g0033	AFR	MSL	POLR2J3_chr7_102561966_102577583	POLR2J3	chr7	102561966	102577583
HG04115	hp1	a0004	c0005	t0001	g0009	SAS	STU	POLR2J3_chr7_102561966_102577583	POLR2J3	chr7	102561966	102577583
HG04115	hp2	a0001	c0002	t0001	g0007	SAS	STU	POLR2J3_chr7_102561966_102577583	POLR2J3	chr7	102561966	102577583
HG04199	hp1	a0001	c0002	t0001	g0022	SAS	STU	POLR2J3_chr7_102561966_102577583	POLR2J3	chr7	102561966	102577583
HG04199	hp2	a0003	c0001	t0002	g0001	SAS	STU	POLR2J3_chr7_102561966_102577583	POLR2J3	chr7	102561966	102577583
NA18939	hp1	a0003	c0001	t0002	g0014	EAS	JPT	POLR2J3_chr7_102561966_102577583	POLR2J3	chr7	102561966	102577583
NA18939	hp2	a0003	c0001	t0002	g0002	EAS	JPT	POLR2J3_chr7_102561966_102577583	POLR2J3	chr7	102561966	102577583
NA18941	hp1	a0001	c0007	t0002	g0005	EAS	JPT	POLR2J3_chr7_102561966_102577583	POLR2J3	chr7	102561966	102577583
NA18941	hp2	a0002	c0003	t0001	g0026	EAS	JPT	POLR2J3_chr7_102561966_102577583	POLR2J3	chr7	102561966	102577583
NA18946	hp1	a0002	c0003	t0001	g0003	EAS	JPT	POLR2J3_chr7_102561966_102577583	POLR2J3	chr7	102561966	102577583
NA18946	hp2	a0006	c0009	t0001	g0031	EAS	JPT	POLR2J3_chr7_102561966_102577583	POLR2J3	chr7	102561966	102577583
NA18948	hp1	a0002	c0004	t0001	g0029	EAS	JPT	POLR2J3_chr7_102561966_102577583	POLR2J3	chr7	102561966	102577583
NA18948	hp2	a0001	c0002	t0001	g0008	EAS	JPT	POLR2J3_chr7_102561966_102577583	POLR2J3	chr7	102561966	102577583
NA18952	hp1	a0002	c0003	t0001	g0003	EAS	JPT	POLR2J3_chr7_102561966_102577583	POLR2J3	chr7	102561966	102577583
NA18952	hp2	a0002	c0003	t0001	g0003	EAS	JPT	POLR2J3_chr7_102561966_102577583	POLR2J3	chr7	102561966	102577583
NA18964	hp1	a0005	c0008	t0001	g0034	EAS	JPT	POLR2J3_chr7_102561966_102577583	POLR2J3	chr7	102561966	102577583
NA18964	hp2	a0002	c0004	t0001	g0032	EAS	JPT	POLR2J3_chr7_102561966_102577583	POLR2J3	chr7	102561966	102577583
NA18965	hp1	a0002	c0003	t0001	g0004	EAS	JPT	POLR2J3_chr7_102561966_102577583	POLR2J3	chr7	102561966	102577583
NA18965	hp2	a0003	c0001	t0002	g0002	EAS	JPT	POLR2J3_chr7_102561966_102577583	POLR2J3	chr7	102561966	102577583
NA18973	hp1	a0002	c0004	t0001	g0030	EAS	JPT	POLR2J3_chr7_102561966_102577583	POLR2J3	chr7	102561966	102577583
NA18973	hp2	a0005	c0008	t0001	g0035	EAS	JPT	POLR2J3_chr7_102561966_102577583	POLR2J3	chr7	102561966	102577583
NA18976	hp1	a0001	c0002	t0001	g0006	EAS	JPT	POLR2J3_chr7_102561966_102577583	POLR2J3	chr7	102561966	102577583
NA18976	hp2	a0001	c0007	t0002	g0005	EAS	JPT	POLR2J3_chr7_102561966_102577583	POLR2J3	chr7	102561966	102577583
NA18981	hp1	a0004	c0005	t0001	g0027	EAS	JPT	POLR2J3_chr7_102561966_102577583	POLR2J3	chr7	102561966	102577583
NA18981	hp2	a0001	c0002	t0001	g0007	EAS	JPT	POLR2J3_chr7_102561966_102577583	POLR2J3	chr7	102561966	102577583
NA18983	hp1	a0003	c0001	t0002	g0015	EAS	JPT	POLR2J3_chr7_102561966_102577583	POLR2J3	chr7	102561966	102577583
NA18983	hp2	a0001	c0006	t0003	g0011	EAS	JPT	POLR2J3_chr7_102561966_102577583	POLR2J3	chr7	102561966	102577583
NA18988	hp1	a0004	c0005	t0001	g0009	EAS	JPT	POLR2J3_chr7_102561966_102577583	POLR2J3	chr7	102561966	102577583
NA18988	hp2	a0002	c0004	t0001	g0010	EAS	JPT	POLR2J3_chr7_102561966_102577583	POLR2J3	chr7	102561966	102577583
NA18989	hp1	a0002	c0004	t0001	g0010	EAS	JPT	POLR2J3_chr7_102561966_102577583	POLR2J3	chr7	102561966	102577583
NA18989	hp2	a0003	c0001	t0002	g0001	EAS	JPT	POLR2J3_chr7_102561966_102577583	POLR2J3	chr7	102561966	102577583
NA18990	hp1	a0002	c0003	t0002	g0012	EAS	JPT	POLR2J3_chr7_102561966_102577583	POLR2J3	chr7	102561966	102577583
NA18990	hp2	a0001	c0007	t0002	g0005	EAS	JPT	POLR2J3_chr7_102561966_102577583	POLR2J3	chr7	102561966	102577583
NA18991	hp1	a0003	c0001	t0002	g0002	EAS	JPT	POLR2J3_chr7_102561966_102577583	POLR2J3	chr7	102561966	102577583
NA18991	hp2	a0003	c0001	t0002	g0001	EAS	JPT	POLR2J3_chr7_102561966_102577583	POLR2J3	chr7	102561966	102577583
NA18997	hp1	a0003	c0001	t0002	g0002	EAS	JPT	POLR2J3_chr7_102561966_102577583	POLR2J3	chr7	102561966	102577583
NA18997	hp2	a0003	c0001	t0002	g0001	EAS	JPT	POLR2J3_chr7_102561966_102577583	POLR2J3	chr7	102561966	102577583
NA18998	hp1	a0003	c0001	t0002	g0002	EAS	JPT	POLR2J3_chr7_102561966_102577583	POLR2J3	chr7	102561966	102577583
NA18998	hp2	a0001	c0006	t0003	g0011	EAS	JPT	POLR2J3_chr7_102561966_102577583	POLR2J3	chr7	102561966	102577583
NA19001	hp1	a0005	c0008	t0001	g0037	EAS	JPT	POLR2J3_chr7_102561966_102577583	POLR2J3	chr7	102561966	102577583
NA19001	hp2	a0001	c0002	t0001	g0008	EAS	JPT	POLR2J3_chr7_102561966_102577583	POLR2J3	chr7	102561966	102577583
NA19003	hp1	a0003	c0001	t0002	g0001	EAS	JPT	POLR2J3_chr7_102561966_102577583	POLR2J3	chr7	102561966	102577583
NA19003	hp2	a0001	c0010	t0003	g0038	EAS	JPT	POLR2J3_chr7_102561966_102577583	POLR2J3	chr7	102561966	102577583
NA19004	hp1	a0001	c0002	t0001	g0028	EAS	JPT	POLR2J3_chr7_102561966_102577583	POLR2J3	chr7	102561966	102577583
NA19004	hp2	a0002	c0003	t0001	g0004	EAS	JPT	POLR2J3_chr7_102561966_102577583	POLR2J3	chr7	102561966	102577583
NA19055	hp1	a0002	c0003	t0001	g0021	EAS	JPT	POLR2J3_chr7_102561966_102577583	POLR2J3	chr7	102561966	102577583
NA19055	hp2	a0001	c0002	t0001	g0008	EAS	JPT	POLR2J3_chr7_102561966_102577583	POLR2J3	chr7	102561966	102577583
NA19060	hp1	a0003	c0001	t0002	g0016	EAS	JPT	POLR2J3_chr7_102561966_102577583	POLR2J3	chr7	102561966	102577583
NA19060	hp2	a0001	c0002	t0001	g0007	EAS	JPT	POLR2J3_chr7_102561966_102577583	POLR2J3	chr7	102561966	102577583
NA19070	hp1	a0003	c0001	t0002	g0017	EAS	JPT	POLR2J3_chr7_102561966_102577583	POLR2J3	chr7	102561966	102577583
NA19070	hp2	a0002	c0003	t0002	g0013	EAS	JPT	POLR2J3_chr7_102561966_102577583	POLR2J3	chr7	102561966	102577583
NA19076	hp1	a0002	c0003	t0001	g0004	EAS	JPT	POLR2J3_chr7_102561966_102577583	POLR2J3	chr7	102561966	102577583
NA19076	hp2	a0005	c0008	t0001	g0036	EAS	JPT	POLR2J3_chr7_102561966_102577583	POLR2J3	chr7	102561966	102577583
NA19080	hp1	a0004	c0005	t0003	g0039	EAS	JPT	POLR2J3_chr7_102561966_102577583	POLR2J3	chr7	102561966	102577583
NA19080	hp2	a0004	c0005	t0003	g0040	EAS	JPT	POLR2J3_chr7_102561966_102577583	POLR2J3	chr7	102561966	102577583
NA19089	hp1	a0002	c0003	t0001	g0004	EAS	JPT	POLR2J3_chr7_102561966_102577583	POLR2J3	chr7	102561966	102577583
NA19089	hp2	a0003	c0001	t0002	g0001	EAS	JPT	POLR2J3_chr7_102561966_102577583	POLR2J3	chr7	102561966	102577583
NA19091	hp1	a0001	c0002	t0001	g0019	EAS	JPT	POLR2J3_chr7_102561966_102577583	POLR2J3	chr7	102561966	102577583
NA19091	hp2	a0001	c0002	t0001	g0006	EAS	JPT	POLR2J3_chr7_102561966_102577583	POLR2J3	chr7	102561966	102577583

chr:pos	ref	alt	# # of ahapid:amino-acid(protein) level	ahapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	hgvs_p	genename	geneid	featuretype	featureid	transcript_biotype	rank	cdna cdna pos length	cds cds pos length	aa aa pos length	chr	pos
chr7:102568040	A A	C C	1	a0002 a0002	18	HG00558.hp1 HG01928.hp1 NA18941.hp2 others(15): Show HG00558.hp1 HG01928.hp1 NA18941.hp2 NA18946.hp1 NA18948.hp1 NA18952.hp1 NA18952.hp2 NA18964.hp2 NA18965.hp1 NA18973.hp1 NA18988.hp2 NA18989.hp1 NA18990.hp1 NA19004.hp2 NA19055.hp1 NA19070.hp2 NA19076.hp1 NA19089.hp1	missense_variant	MODERATE	c.285T>G c.285T>G	p.Ser95Arg p.Ser95Arg	POLR2J3	ENSG00000285437.2	transcript	ENST00000621093.5	protein_coding	3/4	347/495	285/348	95/115	chr7	102568040
chr7:102568092	G G	A A	1	a0004 a0004	5	HG04115.hp1 NA18981.hp1 NA18988.hp1 others(2): Show HG04115.hp1 NA18981.hp1 NA18988.hp1 NA19080.hp1 NA19080.hp2	missense_variant	MODERATE	c.233C>T c.233C>T	p.Pro78Leu p.Pro78Leu	POLR2J3	ENSG00000285437.2	transcript	ENST00000621093.5	protein_coding	3/4	295/495	233/348	78/115	chr7	102568092
chr7:102569873	G G	C C	1	a0003 a0003	16	HG01255.hp2 HG04199.hp2 NA18939.hp1 others(13): Show HG01255.hp2 HG04199.hp2 NA18939.hp1 NA18939.hp2 NA18965.hp2 NA18983.hp1 NA18989.hp2 NA18991.hp1 NA18991.hp2 NA18997.hp1 NA18997.hp2 NA18998.hp1 NA19003.hp1 NA19060.hp1 NA19070.hp1 NA19089.hp2	missense_variant	MODERATE	c.102C>G c.102C>G	p.Ile34Met p.Ile34Met	POLR2J3	ENSG00000285437.2	transcript	ENST00000621093.5	protein_coding	2/4	164/495	102/348	34/115	chr7	102569873
chr7:102569891	A A	C C	1	a0006 a0006	1	NA18946.hp2 NA18946.hp2	missense_variant	MODERATE	c.84T>G c.84T>G	p.Asn28Lys p.Asn28Lys	POLR2J3	ENSG00000285437.2	transcript	ENST00000621093.5	protein_coding	2/4	146/495	84/348	28/115	chr7	102569891
chr7:102572492	G G	C C	1	a0005 a0005	4	NA18964.hp1 NA18973.hp2 NA19001.hp1 others(1): Show NA18964.hp1 NA18973.hp2 NA19001.hp1 NA19076.hp2	missense_variant	MODERATE	c.30C>G c.30C>G	p.Phe10Leu p.Phe10Leu	POLR2J3	ENSG00000285437.2	transcript	ENST00000621093.5	protein_coding	1/4	92/495	30/348	10/115	chr7	102572492

chr:pos	ref	alt	# # of chapid	chapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	hgvs_p	genename	geneid	featuretype	featureid	transcript_biotype	rank	cdna cdna pos length	cds cds pos length	aa aa pos length	chr	pos
chr7:102568013	G G	A A	1	a0001c0011 a0001c0011	1	HG01255.hp1 HG01255.hp1	synonymous_variant	LOW	c.312C>T c.312C>T	p.Phe104Phe p.Phe104Phe	POLR2J3	ENSG00000285437.2	transcript	ENST00000621093.5	protein_coding	3/4	374/495	312/348	104/115	chr7	102568013
chr7:102568040	A A	G G	4	a0001c0002 a0001c0010 a0003c0001 others(1): Show a0001c0002 a0001c0010 a0003c0001 a0005c0008	35	HG00558.hp2 HG01255.hp2 HG01928.hp2 others(32): Show HG00558.hp2 HG01255.hp2 HG01928.hp2 HG03041.hp2 HG04115.hp2 HG04199.hp1 HG04199.hp2 NA18939.hp1 NA18939.hp2 NA18948.hp2 NA18964.hp1 NA18965.hp2 NA18973.hp2 NA18976.hp1 NA18981.hp2 NA18983.hp1 NA18989.hp2 NA18991.hp1 NA18991.hp2 NA18997.hp1 NA18997.hp2 NA18998.hp1 NA19001.hp1 NA19001.hp2 NA19003.hp1 NA19003.hp2 NA19004.hp1 NA19055.hp2 NA19060.hp1 NA19060.hp2 NA19070.hp1 NA19076.hp2 NA19089.hp2 NA19091.hp1 NA19091.hp2	synonymous_variant	LOW	c.285T>C c.285T>C	p.Ser95Ser p.Ser95Ser	POLR2J3	ENSG00000285437.2	transcript	ENST00000621093.5	protein_coding	3/4	347/495	285/348	95/115	chr7	102568040
chr7:102569885	A A	G G	5	a0001c0006 a0001c0010 a0001c0011 others(2): Show a0001c0006 a0001c0010 a0001c0011 a0002c0004 a0006c0009	12	HG01255.hp1 HG03579.hp1 HG03579.hp2 others(9): Show HG01255.hp1 HG03579.hp1 HG03579.hp2 NA18946.hp2 NA18948.hp1 NA18964.hp2 NA18973.hp1 NA18983.hp2 NA18988.hp2 NA18989.hp1 NA18998.hp2 NA19003.hp2	synonymous_variant	LOW	c.90T>C c.90T>C	p.Cys30Cys p.Cys30Cys	POLR2J3	ENSG00000285437.2	transcript	ENST00000621093.5	protein_coding	2/4	152/495	90/348	30/115	chr7	102569885

chr:pos	ref	alt	# # of thapid:transcript level	thapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	chr	pos
chr7:102572553	T T	C C	1	a0001c0011t0004 a0001c0011t0004	1	HG01255.hp1 HG01255.hp1	5_prime_UTR_variant	MODIFIER	c.-32A>G c.-32A>G	POLR2J3	ENSG00000285437.2	transcript	ENST00000621093.5	protein_coding	1/4	32	chr7	102572553
chr7:102572553	T T	G G	3	a0001c0006t0003 a0001c0010t0003 a0004c0005t0003 a0001c0006t0003 a0001c0010t0003 a0004c0005t0003	5	NA18983.hp2 NA18998.hp2 NA19003.hp2 others(2): Show NA18983.hp2 NA18998.hp2 NA19003.hp2 NA19080.hp1 NA19080.hp2	5_prime_UTR_variant	MODIFIER	c.-32A>C c.-32A>C	POLR2J3	ENSG00000285437.2	transcript	ENST00000621093.5	protein_coding	1/4	32	chr7	102572553
chr7:102572565	C C	T T	4	a0001c0006t0002 a0001c0007t0002 a0002c0003t0002 others(1): Show a0001c0006t0002 a0001c0007t0002 a0002c0003t0002 a0003c0001t0002	22	HG01255.hp2 HG03579.hp1 HG04199.hp2 others(19): Show HG01255.hp2 HG03579.hp1 HG04199.hp2 NA18939.hp1 NA18939.hp2 NA18941.hp1 NA18965.hp2 NA18976.hp2 NA18983.hp1 NA18989.hp2 NA18990.hp1 NA18990.hp2 NA18991.hp1 NA18991.hp2 NA18997.hp1 NA18997.hp2 NA18998.hp1 NA19003.hp1 NA19060.hp1 NA19070.hp1 NA19070.hp2 NA19089.hp2	5_prime_UTR_variant	MODIFIER	c.-44G>A c.-44G>A	POLR2J3	ENSG00000285437.2	transcript	ENST00000621093.5	protein_coding	1/4	44	chr7	102572565

chr:pos	ref	alt	# # of ghapid:genebody level	ghapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	genename	geneid	featuretype	featureid	genebody_biotype	rank	chr	pos
chr7:102567268	C C	G G	8	a0001c0002t0001g0006 a0001c0002t0001g0008 a0001c0002t0001g0020 others(5): Show a0001c0002t0001g0006 a0001c0002t0001g0008 a0001c0002t0001g0020 a0001c0006t0002g0018 a0001c0007t0002g0005 a0003c0001t0002g0001 a0003c0001t0002g0014 a0005c0008t0001g0036	20	HG00558.hp2 HG01255.hp2 HG01928.hp2 others(17): Show HG00558.hp2 HG01255.hp2 HG01928.hp2 HG03579.hp1 HG04199.hp2 NA18939.hp1 NA18941.hp1 NA18948.hp2 NA18976.hp1 NA18976.hp2 NA18989.hp2 NA18990.hp2 NA18991.hp2 NA18997.hp2 NA19001.hp2 NA19003.hp1 NA19055.hp2 NA19076.hp2 NA19089.hp2 NA19091.hp2	intron_variant	MODIFIER	c.316-185G>C c.316-185G>C	POLR2J3	ENSG00000285437.2	transcript	ENST00000621093.5	protein_coding	3/3	chr7	102567268
chr7:102567334	A A	C C	5	a0001c0002t0001g0019 a0001c0002t0001g0022 a0005c0008t0001g0034 others(2): Show a0001c0002t0001g0019 a0001c0002t0001g0022 a0005c0008t0001g0034 a0005c0008t0001g0035 a0005c0008t0001g0037	5	HG04199.hp1 NA18964.hp1 NA18973.hp2 others(2): Show HG04199.hp1 NA18964.hp1 NA18973.hp2 NA19001.hp1 NA19091.hp1	intron_variant	MODIFIER	c.316-251T>G c.316-251T>G	POLR2J3	ENSG00000285437.2	transcript	ENST00000621093.5	protein_coding	3/3	chr7	102567334
chr7:102567339	T T	C C	3	a0001c0002t0001g0020 a0001c0007t0001g0023 a0005c0008t0001g0036 a0001c0002t0001g0020 a0001c0007t0001g0023 a0005c0008t0001g0036	3	HG00558.hp2 HG03041.hp1 NA19076.hp2 HG00558.hp2 HG03041.hp1 NA19076.hp2	intron_variant	MODIFIER	c.316-256A>G c.316-256A>G	POLR2J3	ENSG00000285437.2	transcript	ENST00000621093.5	protein_coding	3/3	chr7	102567339
chr7:102567480	C C	CA CA	5	a0002c0003t0001g0003 a0002c0004t0001g0010 a0002c0004t0001g0029 others(2): Show a0002c0003t0001g0003 a0002c0004t0001g0010 a0002c0004t0001g0029 a0002c0004t0001g0030 a0002c0004t0001g0032	9	HG00558.hp1 NA18946.hp1 NA18948.hp1 others(6): Show HG00558.hp1 NA18946.hp1 NA18948.hp1 NA18952.hp1 NA18952.hp2 NA18964.hp2 NA18973.hp1 NA18988.hp2 NA18989.hp1	intron_variant	MODIFIER	c.316-398dupT c.316-398dupT	POLR2J3	ENSG00000285437.2	transcript	ENST00000621093.5	protein_coding	3/3	chr7	102567480
chr7:102567512	A A	G G	1	a0003c0001t0002g0015 a0003c0001t0002g0015	1	NA18983.hp1 NA18983.hp1	intron_variant	MODIFIER	c.316-429T>C c.316-429T>C	POLR2J3	ENSG00000285437.2	transcript	ENST00000621093.5	protein_coding	3/3	chr7	102567512
chr7:102567629	G G	A A	1	a0004c0005t0003g0040 a0004c0005t0003g0040	1	NA19080.hp2 NA19080.hp2	intron_variant	MODIFIER	c.315+381C>T c.315+381C>T	POLR2J3	ENSG00000285437.2	transcript	ENST00000621093.5	protein_coding	3/3	chr7	102567629
chr7:102567778	G G	A A	1	a0001c0002t0001g0025 a0001c0002t0001g0025	1	HG03041.hp2 HG03041.hp2	intron_variant	MODIFIER	c.315+232C>T c.315+232C>T	POLR2J3	ENSG00000285437.2	transcript	ENST00000621093.5	protein_coding	3/3	chr7	102567778
chr7:102567952	T T	C C	4	a0001c0002t0001g0006 a0001c0002t0001g0008 a0001c0002t0001g0025 others(1): Show a0001c0002t0001g0006 a0001c0002t0001g0008 a0001c0002t0001g0025 a0006c0009t0001g0031	8	HG01928.hp2 HG03041.hp2 NA18946.hp2 others(5): Show HG01928.hp2 HG03041.hp2 NA18946.hp2 NA18948.hp2 NA18976.hp1 NA19001.hp2 NA19055.hp2 NA19091.hp2	intron_variant	MODIFIER	c.315+58A>G c.315+58A>G	POLR2J3	ENSG00000285437.2	transcript	ENST00000621093.5	protein_coding	3/3	chr7	102567952
chr7:102567961	G G	A A	3	a0004c0005t0001g0009 a0004c0005t0003g0039 a0004c0005t0003g0040 a0004c0005t0001g0009 a0004c0005t0003g0039 a0004c0005t0003g0040	4	HG04115.hp1 NA18988.hp1 NA19080.hp1 others(1): Show HG04115.hp1 NA18988.hp1 NA19080.hp1 NA19080.hp2	intron_variant	MODIFIER	c.315+49C>T c.315+49C>T	POLR2J3	ENSG00000285437.2	transcript	ENST00000621093.5	protein_coding	3/3	chr7	102567961
chr7:102568001	C C	T T	4	a0003c0001t0002g0002 a0003c0001t0002g0015 a0003c0001t0002g0016 others(1): Show a0003c0001t0002g0002 a0003c0001t0002g0015 a0003c0001t0002g0016 a0003c0001t0002g0017	8	NA18939.hp2 NA18965.hp2 NA18983.hp1 others(5): Show NA18939.hp2 NA18965.hp2 NA18983.hp1 NA18991.hp1 NA18997.hp1 NA18998.hp1 NA19060.hp1 NA19070.hp1	intron_variant	MODIFIER	c.315+9G>A c.315+9G>A	POLR2J3	ENSG00000285437.2	transcript	ENST00000621093.5	protein_coding	3/3	chr7	102568001
chr7:102568224	T T	C C	6	a0003c0001t0002g0001 a0003c0001t0002g0002 a0003c0001t0002g0014 others(3): Show a0003c0001t0002g0001 a0003c0001t0002g0002 a0003c0001t0002g0014 a0003c0001t0002g0015 a0003c0001t0002g0016 a0003c0001t0002g0017	16	HG01255.hp2 HG04199.hp2 NA18939.hp1 others(13): Show HG01255.hp2 HG04199.hp2 NA18939.hp1 NA18939.hp2 NA18965.hp2 NA18983.hp1 NA18989.hp2 NA18991.hp1 NA18991.hp2 NA18997.hp1 NA18997.hp2 NA18998.hp1 NA19003.hp1 NA19060.hp1 NA19070.hp1 NA19089.hp2	intron_variant	MODIFIER	c.141-40A>G c.141-40A>G	POLR2J3	ENSG00000285437.2	transcript	ENST00000621093.5	protein_coding	2/3	chr7	102568224
chr7:102568300	C C	CA CA	4	a0004c0005t0001g0009 a0004c0005t0001g0027 a0004c0005t0003g0039 others(1): Show a0004c0005t0001g0009 a0004c0005t0001g0027 a0004c0005t0003g0039 a0004c0005t0003g0040	5	HG04115.hp1 NA18981.hp1 NA18988.hp1 others(2): Show HG04115.hp1 NA18981.hp1 NA18988.hp1 NA19080.hp1 NA19080.hp2	intron_variant	MODIFIER	c.141-117dupT c.141-117dupT	POLR2J3	ENSG00000285437.2	transcript	ENST00000621093.5	protein_coding	2/3	chr7	102568300
chr7:102568376	C C	T T	4	a0004c0005t0001g0009 a0004c0005t0001g0027 a0004c0005t0003g0039 others(1): Show a0004c0005t0001g0009 a0004c0005t0001g0027 a0004c0005t0003g0039 a0004c0005t0003g0040	5	HG04115.hp1 NA18981.hp1 NA18988.hp1 others(2): Show HG04115.hp1 NA18981.hp1 NA18988.hp1 NA19080.hp1 NA19080.hp2	intron_variant	MODIFIER	c.141-192G>A c.141-192G>A	POLR2J3	ENSG00000285437.2	transcript	ENST00000621093.5	protein_coding	2/3	chr7	102568376
chr7:102568415	G G	C C	4	a0001c0002t0001g0007 a0001c0002t0001g0028 a0001c0006t0001g0033 others(1): Show a0001c0002t0001g0007 a0001c0002t0001g0028 a0001c0006t0001g0033 a0006c0009t0001g0031	6	HG03579.hp2 HG04115.hp2 NA18946.hp2 others(3): Show HG03579.hp2 HG04115.hp2 NA18946.hp2 NA18981.hp2 NA19004.hp1 NA19060.hp2	intron_variant	MODIFIER	c.141-231C>G c.141-231C>G	POLR2J3	ENSG00000285437.2	transcript	ENST00000621093.5	protein_coding	2/3	chr7	102568415
chr7:102568483	T T	C C	3	a0001c0002t0001g0006 a0001c0002t0001g0008 a0001c0002t0001g0025 a0001c0002t0001g0006 a0001c0002t0001g0008 a0001c0002t0001g0025	7	HG01928.hp2 HG03041.hp2 NA18948.hp2 others(4): Show HG01928.hp2 HG03041.hp2 NA18948.hp2 NA18976.hp1 NA19001.hp2 NA19055.hp2 NA19091.hp2	intron_variant	MODIFIER	c.141-299A>G c.141-299A>G	POLR2J3	ENSG00000285437.2	transcript	ENST00000621093.5	protein_coding	2/3	chr7	102568483
chr7:102568668	A A	G G	41	a0001c0002t0001g0006 a0001c0002t0001g0007 a0001c0002t0001g0008 others(38): Show a0001c0002t0001g0006 a0001c0002t0001g0007 a0001c0002t0001g0008 a0001c0002t0001g0019 a0001c0002t0001g0020 a0001c0002t0001g0022 a0001c0002t0001g0025 a0001c0002t0001g0028 a0001c0006t0001g0033 a0001c0006t0002g0018 a0001c0006t0003g0011 a0001c0007t0001g0023 a0001c0007t0002g0005 a0001c0010t0003g0038 a0001c0011t0004g0041 a0002c0003t0001g0003 a0002c0003t0001g0004 a0002c0003t0001g0021 a0002c0003t0001g0024 a0002c0003t0001g0026 a0002c0003t0002g0012 a0002c0003t0002g0013 a0002c0004t0001g0010 a0002c0004t0001g0029 a0002c0004t0001g0030 a0002c0004t0001g0032 a0003c0001t0002g0001 a0003c0001t0002g0002 a0003c0001t0002g0014 a0003c0001t0002g0015 a0003c0001t0002g0016 a0003c0001t0002g0017 a0004c0005t0001g0009 a0004c0005t0001g0027 a0004c0005t0003g0039 a0004c0005t0003g0040 a0005c0008t0001g0034 a0005c0008t0001g0035 a0005c0008t0001g0036 a0005c0008t0001g0037 a0006c0009t0001g0031	68	HG00558.hp1 HG00558.hp2 HG01255.hp1 others(65): Show HG00558.hp1 HG00558.hp2 HG01255.hp1 HG01255.hp2 HG01928.hp1 HG01928.hp2 HG03041.hp1 HG03041.hp2 HG03579.hp1 HG03579.hp2 HG04115.hp1 HG04115.hp2 HG04199.hp1 HG04199.hp2 NA18939.hp1 NA18939.hp2 NA18941.hp1 NA18941.hp2 NA18946.hp1 NA18946.hp2 NA18948.hp1 NA18948.hp2 NA18952.hp1 NA18952.hp2 NA18964.hp1 NA18964.hp2 NA18965.hp1 NA18965.hp2 NA18973.hp1 NA18973.hp2 NA18976.hp1 NA18976.hp2 NA18981.hp1 NA18981.hp2 NA18983.hp1 NA18983.hp2 NA18988.hp1 NA18988.hp2 NA18989.hp1 NA18989.hp2 NA18990.hp1 NA18990.hp2 NA18991.hp1 NA18991.hp2 NA18997.hp1 NA18997.hp2 NA18998.hp1 NA18998.hp2 NA19001.hp1 NA19001.hp2 NA19003.hp1 NA19003.hp2 NA19004.hp1 NA19004.hp2 NA19055.hp1 NA19055.hp2 NA19060.hp1 NA19060.hp2 NA19070.hp1 NA19070.hp2 NA19076.hp1 NA19076.hp2 NA19080.hp1 NA19080.hp2 NA19089.hp1 NA19089.hp2 NA19091.hp1 NA19091.hp2	intron_variant	MODIFIER	c.141-484T>C c.141-484T>C	POLR2J3	ENSG00000285437.2	transcript	ENST00000621093.5	protein_coding	2/3	chr7	102568668
chr7:102568672	C C	T T	2	a0001c0006t0003g0011 a0001c0010t0003g0038 a0001c0006t0003g0011 a0001c0010t0003g0038	3	NA18983.hp2 NA18998.hp2 NA19003.hp2 NA18983.hp2 NA18998.hp2 NA19003.hp2	intron_variant	MODIFIER	c.141-488G>A c.141-488G>A	POLR2J3	ENSG00000285437.2	transcript	ENST00000621093.5	protein_coding	2/3	chr7	102568672
chr7:102568683	C C	G G	1	a0002c0003t0002g0012 a0002c0003t0002g0012	1	NA18990.hp1 NA18990.hp1	intron_variant	MODIFIER	c.141-499G>C c.141-499G>C	POLR2J3	ENSG00000285437.2	transcript	ENST00000621093.5	protein_coding	2/3	chr7	102568683
chr7:102568690	T T	C C	30	a0001c0002t0001g0006 a0001c0002t0001g0007 a0001c0002t0001g0008 others(27): Show a0001c0002t0001g0006 a0001c0002t0001g0007 a0001c0002t0001g0008 a0001c0002t0001g0019 a0001c0002t0001g0020 a0001c0002t0001g0022 a0001c0002t0001g0025 a0001c0002t0001g0028 a0001c0006t0001g0033 a0001c0006t0002g0018 a0001c0006t0003g0011 a0001c0007t0002g0005 a0001c0010t0003g0038 a0001c0011t0004g0041 a0002c0003t0001g0026 a0003c0001t0002g0001 a0003c0001t0002g0002 a0003c0001t0002g0014 a0003c0001t0002g0015 a0003c0001t0002g0016 a0003c0001t0002g0017 a0004c0005t0001g0009 a0004c0005t0001g0027 a0004c0005t0003g0039 a0004c0005t0003g0040 a0005c0008t0001g0034 a0005c0008t0001g0035 a0005c0008t0001g0036 a0005c0008t0001g0037 a0006c0009t0001g0031	50	HG00558.hp2 HG01255.hp1 HG01255.hp2 others(47): Show HG00558.hp2 HG01255.hp1 HG01255.hp2 HG01928.hp2 HG03041.hp2 HG03579.hp1 HG03579.hp2 HG04115.hp1 HG04115.hp2 HG04199.hp1 HG04199.hp2 NA18939.hp1 NA18939.hp2 NA18941.hp1 NA18941.hp2 NA18946.hp2 NA18948.hp2 NA18964.hp1 NA18965.hp2 NA18973.hp2 NA18976.hp1 NA18976.hp2 NA18981.hp1 NA18981.hp2 NA18983.hp1 NA18983.hp2 NA18988.hp1 NA18989.hp2 NA18990.hp2 NA18991.hp1 NA18991.hp2 NA18997.hp1 NA18997.hp2 NA18998.hp1 NA18998.hp2 NA19001.hp1 NA19001.hp2 NA19003.hp1 NA19003.hp2 NA19004.hp1 NA19055.hp2 NA19060.hp1 NA19060.hp2 NA19070.hp1 NA19076.hp2 NA19080.hp1 NA19080.hp2 NA19089.hp2 NA19091.hp1 NA19091.hp2	intron_variant	MODIFIER	c.141-506A>G c.141-506A>G	POLR2J3	ENSG00000285437.2	transcript	ENST00000621093.5	protein_coding	2/3	chr7	102568690
chr7:102568710	T T	C C	40	a0001c0002t0001g0006 a0001c0002t0001g0007 a0001c0002t0001g0008 others(37): Show a0001c0002t0001g0006 a0001c0002t0001g0007 a0001c0002t0001g0008 a0001c0002t0001g0019 a0001c0002t0001g0020 a0001c0002t0001g0022 a0001c0002t0001g0025 a0001c0002t0001g0028 a0001c0006t0001g0033 a0001c0006t0002g0018 a0001c0006t0003g0011 a0001c0007t0002g0005 a0001c0010t0003g0038 a0001c0011t0004g0041 a0002c0003t0001g0003 a0002c0003t0001g0004 a0002c0003t0001g0021 a0002c0003t0001g0024 a0002c0003t0001g0026 a0002c0003t0002g0012 a0002c0003t0002g0013 a0002c0004t0001g0010 a0002c0004t0001g0029 a0002c0004t0001g0030 a0002c0004t0001g0032 a0003c0001t0002g0001 a0003c0001t0002g0002 a0003c0001t0002g0014 a0003c0001t0002g0015 a0003c0001t0002g0016 a0003c0001t0002g0017 a0004c0005t0001g0009 a0004c0005t0001g0027 a0004c0005t0003g0039 a0004c0005t0003g0040 a0005c0008t0001g0034 a0005c0008t0001g0035 a0005c0008t0001g0036 a0005c0008t0001g0037 a0006c0009t0001g0031	67	HG00558.hp1 HG00558.hp2 HG01255.hp1 others(64): Show HG00558.hp1 HG00558.hp2 HG01255.hp1 HG01255.hp2 HG01928.hp1 HG01928.hp2 HG03041.hp2 HG03579.hp1 HG03579.hp2 HG04115.hp1 HG04115.hp2 HG04199.hp1 HG04199.hp2 NA18939.hp1 NA18939.hp2 NA18941.hp1 NA18941.hp2 NA18946.hp1 NA18946.hp2 NA18948.hp1 NA18948.hp2 NA18952.hp1 NA18952.hp2 NA18964.hp1 NA18964.hp2 NA18965.hp1 NA18965.hp2 NA18973.hp1 NA18973.hp2 NA18976.hp1 NA18976.hp2 NA18981.hp1 NA18981.hp2 NA18983.hp1 NA18983.hp2 NA18988.hp1 NA18988.hp2 NA18989.hp1 NA18989.hp2 NA18990.hp1 NA18990.hp2 NA18991.hp1 NA18991.hp2 NA18997.hp1 NA18997.hp2 NA18998.hp1 NA18998.hp2 NA19001.hp1 NA19001.hp2 NA19003.hp1 NA19003.hp2 NA19004.hp1 NA19004.hp2 NA19055.hp1 NA19055.hp2 NA19060.hp1 NA19060.hp2 NA19070.hp1 NA19070.hp2 NA19076.hp1 NA19076.hp2 NA19080.hp1 NA19080.hp2 NA19089.hp1 NA19089.hp2 NA19091.hp1 NA19091.hp2	intron_variant	MODIFIER	c.141-526A>G c.141-526A>G	POLR2J3	ENSG00000285437.2	transcript	ENST00000621093.5	protein_coding	2/3	chr7	102568710
chr7:102568829	G G	A A	6	a0001c0002t0001g0007 a0001c0006t0001g0033 a0001c0006t0003g0011 others(3): Show a0001c0002t0001g0007 a0001c0006t0001g0033 a0001c0006t0003g0011 a0001c0007t0002g0005 a0001c0010t0003g0038 a0006c0009t0001g0031	11	HG03579.hp2 HG04115.hp2 NA18941.hp1 others(8): Show HG03579.hp2 HG04115.hp2 NA18941.hp1 NA18946.hp2 NA18976.hp2 NA18981.hp2 NA18983.hp2 NA18990.hp2 NA18998.hp2 NA19003.hp2 NA19060.hp2	intron_variant	MODIFIER	c.141-645C>T c.141-645C>T	POLR2J3	ENSG00000285437.2	transcript	ENST00000621093.5	protein_coding	2/3	chr7	102568829
chr7:102569083	C C	T T	1	a0001c0007t0002g0005 a0001c0007t0002g0005	3	NA18941.hp1 NA18976.hp2 NA18990.hp2 NA18941.hp1 NA18976.hp2 NA18990.hp2	intron_variant	MODIFIER	c.140+752G>A c.140+752G>A	POLR2J3	ENSG00000285437.2	transcript	ENST00000621093.5	protein_coding	2/3	chr7	102569083
chr7:102569340	A A	G G	36	a0001c0002t0001g0006 a0001c0002t0001g0007 a0001c0002t0001g0008 others(33): Show a0001c0002t0001g0006 a0001c0002t0001g0007 a0001c0002t0001g0008 a0001c0002t0001g0019 a0001c0002t0001g0020 a0001c0002t0001g0022 a0001c0002t0001g0025 a0001c0002t0001g0028 a0001c0006t0002g0018 a0001c0007t0001g0023 a0001c0007t0002g0005 a0002c0003t0001g0003 a0002c0003t0001g0004 a0002c0003t0001g0021 a0002c0003t0001g0024 a0002c0003t0001g0026 a0002c0003t0002g0012 a0002c0003t0002g0013 a0002c0004t0001g0010 a0002c0004t0001g0029 a0002c0004t0001g0030 a0002c0004t0001g0032 a0003c0001t0002g0001 a0003c0001t0002g0002 a0003c0001t0002g0014 a0003c0001t0002g0015 a0003c0001t0002g0016 a0003c0001t0002g0017 a0004c0005t0001g0009 a0004c0005t0001g0027 a0004c0005t0003g0039 a0004c0005t0003g0040 a0005c0008t0001g0034 a0005c0008t0001g0035 a0005c0008t0001g0036 a0005c0008t0001g0037	62	HG00558.hp1 HG00558.hp2 HG01255.hp2 others(59): Show HG00558.hp1 HG00558.hp2 HG01255.hp2 HG01928.hp1 HG01928.hp2 HG03041.hp1 HG03041.hp2 HG03579.hp1 HG04115.hp1 HG04115.hp2 HG04199.hp1 HG04199.hp2 NA18939.hp1 NA18939.hp2 NA18941.hp1 NA18941.hp2 NA18946.hp1 NA18948.hp1 NA18948.hp2 NA18952.hp1 NA18952.hp2 NA18964.hp1 NA18964.hp2 NA18965.hp1 NA18965.hp2 NA18973.hp1 NA18973.hp2 NA18976.hp1 NA18976.hp2 NA18981.hp1 NA18981.hp2 NA18983.hp1 NA18988.hp1 NA18988.hp2 NA18989.hp1 NA18989.hp2 NA18990.hp1 NA18990.hp2 NA18991.hp1 NA18991.hp2 NA18997.hp1 NA18997.hp2 NA18998.hp1 NA19001.hp1 NA19001.hp2 NA19003.hp1 NA19004.hp1 NA19004.hp2 NA19055.hp1 NA19055.hp2 NA19060.hp1 NA19060.hp2 NA19070.hp1 NA19070.hp2 NA19076.hp1 NA19076.hp2 NA19080.hp1 NA19080.hp2 NA19089.hp1 NA19089.hp2 NA19091.hp1 NA19091.hp2	intron_variant	MODIFIER	c.140+495T>C c.140+495T>C	POLR2J3	ENSG00000285437.2	transcript	ENST00000621093.5	protein_coding	2/3	chr7	102569340
chr7:102569435	C C	T T	3	a0001c0006t0002g0018 a0001c0007t0001g0023 a0001c0007t0002g0005 a0001c0006t0002g0018 a0001c0007t0001g0023 a0001c0007t0002g0005	5	HG03041.hp1 HG03579.hp1 NA18941.hp1 others(2): Show HG03041.hp1 HG03579.hp1 NA18941.hp1 NA18976.hp2 NA18990.hp2	intron_variant	MODIFIER	c.140+400G>A c.140+400G>A	POLR2J3	ENSG00000285437.2	transcript	ENST00000621093.5	protein_coding	2/3	chr7	102569435
chr7:102569525	C C	A A	1	a0003c0001t0002g0017 a0003c0001t0002g0017	1	NA19070.hp1 NA19070.hp1	intron_variant	MODIFIER	c.140+310G>T c.140+310G>T	POLR2J3	ENSG00000285437.2	transcript	ENST00000621093.5	protein_coding	2/3	chr7	102569525
chr7:102569575	AAAAC AAAAC	A A	4	a0001c0002t0001g0006 a0001c0002t0001g0008 a0001c0002t0001g0025 others(1): Show a0001c0002t0001g0006 a0001c0002t0001g0008 a0001c0002t0001g0025 a0001c0007t0002g0005	10	HG01928.hp2 HG03041.hp2 NA18941.hp1 others(7): Show HG01928.hp2 HG03041.hp2 NA18941.hp1 NA18948.hp2 NA18976.hp1 NA18976.hp2 NA18990.hp2 NA19001.hp2 NA19055.hp2 NA19091.hp2	intron_variant	MODIFIER	c.140+256_140+259del others(4): Show c.140+256_140+259delGTTT	POLR2J3	ENSG00000285437.2	transcript	ENST00000621093.5	protein_coding	2/3	chr7	102569575
chr7:102569591	C C	A A	4	a0001c0006t0001g0033 a0001c0006t0003g0011 a0001c0010t0003g0038 others(1): Show a0001c0006t0001g0033 a0001c0006t0003g0011 a0001c0010t0003g0038 a0001c0011t0004g0041	5	HG01255.hp1 HG03579.hp2 NA18983.hp2 others(2): Show HG01255.hp1 HG03579.hp2 NA18983.hp2 NA18998.hp2 NA19003.hp2	intron_variant	MODIFIER	c.140+244G>T c.140+244G>T	POLR2J3	ENSG00000285437.2	transcript	ENST00000621093.5	protein_coding	2/3	chr7	102569591
chr7:102569671	C C	T T	1	a0001c0006t0002g0018 a0001c0006t0002g0018	1	HG03579.hp1 HG03579.hp1	intron_variant	MODIFIER	c.140+164G>A c.140+164G>A	POLR2J3	ENSG00000285437.2	transcript	ENST00000621093.5	protein_coding	2/3	chr7	102569671
chr7:102569945	C C	G G	1	a0002c0004t0001g0010 a0002c0004t0001g0010	2	NA18988.hp2 NA18989.hp1 NA18988.hp2 NA18989.hp1	intron_variant	MODIFIER	c.51-21G>C c.51-21G>C	POLR2J3	ENSG00000285437.2	transcript	ENST00000621093.5	protein_coding	1/3	chr7	102569945
chr7:102570131	A A	G G	2	a0003c0001t0002g0002 a0003c0001t0002g0015 a0003c0001t0002g0002 a0003c0001t0002g0015	6	NA18939.hp2 NA18965.hp2 NA18983.hp1 others(3): Show NA18939.hp2 NA18965.hp2 NA18983.hp1 NA18991.hp1 NA18997.hp1 NA18998.hp1	intron_variant	MODIFIER	c.51-207T>C c.51-207T>C	POLR2J3	ENSG00000285437.2	transcript	ENST00000621093.5	protein_coding	1/3	chr7	102570131
chr7:102570134	G G	GA GA	5	a0001c0002t0001g0019 a0001c0002t0001g0020 a0005c0008t0001g0035 others(2): Show a0001c0002t0001g0019 a0001c0002t0001g0020 a0005c0008t0001g0035 a0005c0008t0001g0036 a0005c0008t0001g0037	5	HG00558.hp2 NA18973.hp2 NA19001.hp1 others(2): Show HG00558.hp2 NA18973.hp2 NA19001.hp1 NA19076.hp2 NA19091.hp1	intron_variant	MODIFIER	c.51-211dupT c.51-211dupT	POLR2J3	ENSG00000285437.2	transcript	ENST00000621093.5	protein_coding	1/3	chr7	102570134
chr7:102570134	GA GA	G G	8	a0001c0002t0001g0022 a0001c0006t0002g0018 a0002c0003t0001g0021 others(5): Show a0001c0002t0001g0022 a0001c0006t0002g0018 a0002c0003t0001g0021 a0003c0001t0002g0002 a0003c0001t0002g0014 a0003c0001t0002g0015 a0003c0001t0002g0016 a0003c0001t0002g0017	12	HG03579.hp1 HG04199.hp1 NA18939.hp1 others(9): Show HG03579.hp1 HG04199.hp1 NA18939.hp1 NA18939.hp2 NA18965.hp2 NA18983.hp1 NA18991.hp1 NA18997.hp1 NA18998.hp1 NA19055.hp1 NA19060.hp1 NA19070.hp1	intron_variant	MODIFIER	c.51-211delT c.51-211delT	POLR2J3	ENSG00000285437.2	transcript	ENST00000621093.5	protein_coding	1/3	chr7	102570134
chr7:102570202	AG AG	A A	1	a0003c0001t0002g0001 a0003c0001t0002g0001	7	HG01255.hp2 HG04199.hp2 NA18989.hp2 others(4): Show HG01255.hp2 HG04199.hp2 NA18989.hp2 NA18991.hp2 NA18997.hp2 NA19003.hp1 NA19089.hp2	intron_variant	MODIFIER	c.51-279delC c.51-279delC	POLR2J3	ENSG00000285437.2	transcript	ENST00000621093.5	protein_coding	1/3	chr7	102570202
chr7:102570537	G G	C C	1	a0005c0008t0001g0037 a0005c0008t0001g0037	1	NA19001.hp1 NA19001.hp1	intron_variant	MODIFIER	c.51-613C>G c.51-613C>G	POLR2J3	ENSG00000285437.2	transcript	ENST00000621093.5	protein_coding	1/3	chr7	102570537
chr7:102570563	C C	T T	3	a0002c0004t0001g0010 a0002c0004t0001g0030 a0002c0004t0001g0032 a0002c0004t0001g0010 a0002c0004t0001g0030 a0002c0004t0001g0032	4	NA18964.hp2 NA18973.hp1 NA18988.hp2 others(1): Show NA18964.hp2 NA18973.hp1 NA18988.hp2 NA18989.hp1	intron_variant	MODIFIER	c.51-639G>A c.51-639G>A	POLR2J3	ENSG00000285437.2	transcript	ENST00000621093.5	protein_coding	1/3	chr7	102570563
chr7:102570564	T T	A A	3	a0002c0004t0001g0010 a0002c0004t0001g0030 a0002c0004t0001g0032 a0002c0004t0001g0010 a0002c0004t0001g0030 a0002c0004t0001g0032	4	NA18964.hp2 NA18973.hp1 NA18988.hp2 others(1): Show NA18964.hp2 NA18973.hp1 NA18988.hp2 NA18989.hp1	intron_variant	MODIFIER	c.51-640A>T c.51-640A>T	POLR2J3	ENSG00000285437.2	transcript	ENST00000621093.5	protein_coding	1/3	chr7	102570564
chr7:102570566	C C	T T	2	a0002c0003t0002g0012 a0002c0003t0002g0013 a0002c0003t0002g0012 a0002c0003t0002g0013	2	NA18990.hp1 NA19070.hp2 NA18990.hp1 NA19070.hp2	intron_variant	MODIFIER	c.51-642G>A c.51-642G>A	POLR2J3	ENSG00000285437.2	transcript	ENST00000621093.5	protein_coding	1/3	chr7	102570566
chr7:102570572	C C	T T	8	a0001c0002t0001g0025 a0001c0006t0001g0033 a0001c0006t0003g0011 others(5): Show a0001c0002t0001g0025 a0001c0006t0001g0033 a0001c0006t0003g0011 a0001c0010t0003g0038 a0001c0011t0004g0041 a0002c0004t0001g0010 a0002c0004t0001g0029 a0002c0004t0001g0030	10	HG01255.hp1 HG03041.hp2 HG03579.hp2 others(7): Show HG01255.hp1 HG03041.hp2 HG03579.hp2 NA18948.hp1 NA18973.hp1 NA18983.hp2 NA18988.hp2 NA18989.hp1 NA18998.hp2 NA19003.hp2	intron_variant	MODIFIER	c.51-648G>A c.51-648G>A	POLR2J3	ENSG00000285437.2	transcript	ENST00000621093.5	protein_coding	1/3	chr7	102570572
chr7:102570662	T T	C C	6	a0001c0002t0001g0025 a0002c0004t0001g0010 a0002c0004t0001g0029 others(3): Show a0001c0002t0001g0025 a0002c0004t0001g0010 a0002c0004t0001g0029 a0002c0004t0001g0030 a0002c0004t0001g0032 a0006c0009t0001g0031	7	HG03041.hp2 NA18946.hp2 NA18948.hp1 others(4): Show HG03041.hp2 NA18946.hp2 NA18948.hp1 NA18964.hp2 NA18973.hp1 NA18988.hp2 NA18989.hp1	intron_variant	MODIFIER	c.51-738A>G c.51-738A>G	POLR2J3	ENSG00000285437.2	transcript	ENST00000621093.5	protein_coding	1/3	chr7	102570662
chr7:102570684	G G	A A	2	a0002c0003t0001g0004 a0002c0003t0001g0026 a0002c0003t0001g0004 a0002c0003t0001g0026	5	NA18941.hp2 NA18965.hp1 NA19004.hp2 others(2): Show NA18941.hp2 NA18965.hp1 NA19004.hp2 NA19076.hp1 NA19089.hp1	intron_variant	MODIFIER	c.51-760C>T c.51-760C>T	POLR2J3	ENSG00000285437.2	transcript	ENST00000621093.5	protein_coding	1/3	chr7	102570684
chr7:102570752	C C	T T	1	a0001c0011t0004g0041 a0001c0011t0004g0041	1	HG01255.hp1 HG01255.hp1	intron_variant	MODIFIER	c.51-828G>A c.51-828G>A	POLR2J3	ENSG00000285437.2	transcript	ENST00000621093.5	protein_coding	1/3	chr7	102570752
chr7:102571002	G G	A A	5	a0001c0006t0002g0018 a0003c0001t0002g0002 a0003c0001t0002g0015 others(2): Show a0001c0006t0002g0018 a0003c0001t0002g0002 a0003c0001t0002g0015 a0003c0001t0002g0016 a0003c0001t0002g0017	9	HG03579.hp1 NA18939.hp2 NA18965.hp2 others(6): Show HG03579.hp1 NA18939.hp2 NA18965.hp2 NA18983.hp1 NA18991.hp1 NA18997.hp1 NA18998.hp1 NA19060.hp1 NA19070.hp1	intron_variant	MODIFIER	c.51-1078C>T c.51-1078C>T	POLR2J3	ENSG00000285437.2	transcript	ENST00000621093.5	protein_coding	1/3	chr7	102571002
chr7:102571073	A A	G G	1	a0002c0003t0001g0021 a0002c0003t0001g0021	1	NA19055.hp1 NA19055.hp1	intron_variant	MODIFIER	c.51-1149T>C c.51-1149T>C	POLR2J3	ENSG00000285437.2	transcript	ENST00000621093.5	protein_coding	1/3	chr7	102571073
chr7:102571493	G G	C C	11	a0001c0002t0001g0007 a0001c0002t0001g0019 a0001c0002t0001g0020 others(8): Show a0001c0002t0001g0007 a0001c0002t0001g0019 a0001c0002t0001g0020 a0001c0002t0001g0028 a0001c0006t0001g0033 a0004c0005t0001g0009 a0004c0005t0001g0027 a0005c0008t0001g0034 a0005c0008t0001g0035 a0005c0008t0001g0036 a0005c0008t0001g0037	14	HG00558.hp2 HG03579.hp2 HG04115.hp1 others(11): Show HG00558.hp2 HG03579.hp2 HG04115.hp1 HG04115.hp2 NA18964.hp1 NA18973.hp2 NA18981.hp1 NA18981.hp2 NA18988.hp1 NA19001.hp1 NA19004.hp1 NA19060.hp2 NA19076.hp2 NA19091.hp1	intron_variant	MODIFIER	c.50+979C>G c.50+979C>G	POLR2J3	ENSG00000285437.2	transcript	ENST00000621093.5	protein_coding	1/3	chr7	102571493
chr7:102571633	G G	C C	1	a0001c0006t0002g0018 a0001c0006t0002g0018	1	HG03579.hp1 HG03579.hp1	intron_variant	MODIFIER	c.50+839C>G c.50+839C>G	POLR2J3	ENSG00000285437.2	transcript	ENST00000621093.5	protein_coding	1/3	chr7	102571633
chr7:102572145	T T	C C	1	a0001c0006t0001g0033 a0001c0006t0001g0033	1	HG03579.hp2 HG03579.hp2	intron_variant	MODIFIER	c.50+327A>G c.50+327A>G	POLR2J3	ENSG00000285437.2	transcript	ENST00000621093.5	protein_coding	1/3	chr7	102572145
chr7:102572292	G G	A A	4	a0001c0006t0003g0011 a0001c0010t0003g0038 a0004c0005t0003g0039 others(1): Show a0001c0006t0003g0011 a0001c0010t0003g0038 a0004c0005t0003g0039 a0004c0005t0003g0040	5	NA18983.hp2 NA18998.hp2 NA19003.hp2 others(2): Show NA18983.hp2 NA18998.hp2 NA19003.hp2 NA19080.hp1 NA19080.hp2	intron_variant	MODIFIER	c.50+180C>T c.50+180C>T	POLR2J3	ENSG00000285437.2	transcript	ENST00000621093.5	protein_coding	1/3	chr7	102572292
chr7:102572296	A A	C C	13	a0001c0002t0001g0008 a0001c0002t0001g0019 a0001c0006t0001g0033 others(10): Show a0001c0002t0001g0008 a0001c0002t0001g0019 a0001c0006t0001g0033 a0001c0011t0004g0041 a0002c0004t0001g0010 a0002c0004t0001g0029 a0002c0004t0001g0030 a0002c0004t0001g0032 a0005c0008t0001g0034 a0005c0008t0001g0035 a0005c0008t0001g0036 a0005c0008t0001g0037 a0006c0009t0001g0031	16	HG01255.hp1 HG03579.hp2 NA18946.hp2 others(13): Show HG01255.hp1 HG03579.hp2 NA18946.hp2 NA18948.hp1 NA18948.hp2 NA18964.hp1 NA18964.hp2 NA18973.hp1 NA18973.hp2 NA18988.hp2 NA18989.hp1 NA19001.hp1 NA19001.hp2 NA19055.hp2 NA19076.hp2 NA19091.hp1	intron_variant	MODIFIER	c.50+176T>G c.50+176T>G	POLR2J3	ENSG00000285437.2	transcript	ENST00000621093.5	protein_coding	1/3	chr7	102572296
chr7:102572300	A A	G G	14	a0001c0002t0001g0008 a0001c0002t0001g0019 a0001c0002t0001g0020 others(11): Show a0001c0002t0001g0008 a0001c0002t0001g0019 a0001c0002t0001g0020 a0001c0006t0001g0033 a0001c0011t0004g0041 a0002c0004t0001g0010 a0002c0004t0001g0029 a0002c0004t0001g0030 a0002c0004t0001g0032 a0005c0008t0001g0034 a0005c0008t0001g0035 a0005c0008t0001g0036 a0005c0008t0001g0037 a0006c0009t0001g0031	17	HG00558.hp2 HG01255.hp1 HG03579.hp2 others(14): Show HG00558.hp2 HG01255.hp1 HG03579.hp2 NA18946.hp2 NA18948.hp1 NA18948.hp2 NA18964.hp1 NA18964.hp2 NA18973.hp1 NA18973.hp2 NA18988.hp2 NA18989.hp1 NA19001.hp1 NA19001.hp2 NA19055.hp2 NA19076.hp2 NA19091.hp1	intron_variant	MODIFIER	c.50+172T>C c.50+172T>C	POLR2J3	ENSG00000285437.2	transcript	ENST00000621093.5	protein_coding	1/3	chr7	102572300
chr7:102572311	G G	T T	4	a0002c0003t0002g0012 a0002c0003t0002g0013 a0003c0001t0002g0001 others(1): Show a0002c0003t0002g0012 a0002c0003t0002g0013 a0003c0001t0002g0001 a0003c0001t0002g0014	10	HG01255.hp2 HG04199.hp2 NA18939.hp1 others(7): Show HG01255.hp2 HG04199.hp2 NA18939.hp1 NA18989.hp2 NA18990.hp1 NA18991.hp2 NA18997.hp2 NA19003.hp1 NA19070.hp2 NA19089.hp2	intron_variant	MODIFIER	c.50+161C>A c.50+161C>A	POLR2J3	ENSG00000285437.2	transcript	ENST00000621093.5	protein_coding	1/3	chr7	102572311
chr7:102572315	G G	A A	6	a0001c0006t0002g0018 a0001c0007t0002g0005 a0003c0001t0002g0002 others(3): Show a0001c0006t0002g0018 a0001c0007t0002g0005 a0003c0001t0002g0002 a0003c0001t0002g0015 a0003c0001t0002g0016 a0003c0001t0002g0017	12	HG03579.hp1 NA18939.hp2 NA18941.hp1 others(9): Show HG03579.hp1 NA18939.hp2 NA18941.hp1 NA18965.hp2 NA18976.hp2 NA18983.hp1 NA18990.hp2 NA18991.hp1 NA18997.hp1 NA18998.hp1 NA19060.hp1 NA19070.hp1	intron_variant	MODIFIER	c.50+157C>T c.50+157C>T	POLR2J3	ENSG00000285437.2	transcript	ENST00000621093.5	protein_coding	1/3	chr7	102572315
chr7:102572433	G G	C C	2	a0001c0002t0001g0008 a0002c0004t0001g0029 a0001c0002t0001g0008 a0002c0004t0001g0029	4	NA18948.hp1 NA18948.hp2 NA19001.hp2 others(1): Show NA18948.hp1 NA18948.hp2 NA19001.hp2 NA19055.hp2	intron_variant	MODIFIER	c.50+39C>G c.50+39C>G	POLR2J3	ENSG00000285437.2	transcript	ENST00000621093.5	protein_coding	1/3	chr7	102572433
chr7:102572445	C C	A A	6	a0001c0006t0001g0033 a0001c0011t0004g0041 a0002c0004t0001g0010 others(3): Show a0001c0006t0001g0033 a0001c0011t0004g0041 a0002c0004t0001g0010 a0002c0004t0001g0030 a0002c0004t0001g0032 a0006c0009t0001g0031	7	HG01255.hp1 HG03579.hp2 NA18946.hp2 others(4): Show HG01255.hp1 HG03579.hp2 NA18946.hp2 NA18964.hp2 NA18973.hp1 NA18988.hp2 NA18989.hp1	intron_variant	MODIFIER	c.50+27G>T c.50+27G>T	POLR2J3	ENSG00000285437.2	transcript	ENST00000621093.5	protein_coding	1/3	chr7	102572445

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🧬 JoGo Online Haplotype Explorer POLR2J3_chr7_102561966_102577583

JoGo Local Haplotype Explorer (on iGV) POLR2J3_chr7_102561966_102577583

Translation Multiple Alignment View

🧬 Gene Summary

AAmino acid(protein) Level Haplotype Info (Total: 6)

CCoding Level Haplotype Info (Total: 11)

TTranscript Level Haplotype Info (Total: 4)

GGenebody Level Haplotype Info (Total: 41)

A C AC Level (Amino Acid + Coding) Haplotype Info (Total: 11)

A C T ACT Level (Amino Acid + Coding + Transcript) Haplotype Info (Total: 16)

A C T G ACTG Level (Amino Acid + Coding + Transcript + Genebody) Haplotype Info (Total: 41)

Haplotype Details by Sample (Haploid Level) (Total: 68)

AAmino acid(protein) Level Haplotype Related Variants (Effect to Protein Coding Variants) (Total: 5)

CCoding Level Variants (Synonymous Mutations) (Total: 3)

TTranscript Level Haplotype Variants (5'UTR+3'UTR) (Total: 3)

GGenebody Level Haplotype Variants (Intron) (Total: 53)

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Annotation (Repeats)

Annotation (SNP Array)