JoGo: Joint Open Genome and Omics Platform

Search by Genic region

geneid	54470
ensemblid	ENSG00000198960.11
hgncid	26094
symbol	ARMCX6
name	armadillo repeat containing X-linked 6
refseq_nuc	NM_019007.4
refseq_prot	NP_061880.2
ensembl_nuc	ENST00000361910.9
ensembl_prot	ENSP00000354708.4
mane_status	MANE Select
chr	chrX
start	101615125
end	101618000
strand	-
ver	v1.2
region	chrX:101615125-101618000
region5000	chrX:101610125-101623000
regionname0	ARMCX6_chrX_101615125_101618000
regionname5000	ARMCX6_chrX_101610125_101623000

ahapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	alen	total	AFR	AMR	EAS	EUR	SAS	JPT	regionname	genename	aa	chr	start	end
a0001	1/1	300	81	36	10	19	5	9	15	ARMCX6_chrX_101610125_101623000	ARMCX6	copy fasta	chrX	101610125	101623000
a0002	0/0	300	12	1	3	6	0	2	4	ARMCX6_chrX_101610125_101623000	ARMCX6	copy fasta	chrX	101610125	101623000
a0003	0/0	300	1	1	0	0	0	0	0	ARMCX6_chrX_101610125_101623000	ARMCX6	copy fasta	chrX	101610125	101623000

chapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	clen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	cseq	chr	start	end
c0001	1/1	903	81	36	10	19	5	9	ARMCX6_chrX_101610125_101623000	ARMCX6	copy fasta	chrX	101610125	101623000
c0002	0/0	903	12	1	3	6	0	2	ARMCX6_chrX_101610125_101623000	ARMCX6	copy fasta	chrX	101610125	101623000
c0003	0/0	903	1	1	0	0	0	0	ARMCX6_chrX_101610125_101623000	ARMCX6	copy fasta	chrX	101610125	101623000

thapid	grch38 chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	tlen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	tseq	chr	start	end
t0001	1/1	938	81	28	13	24	4	10	ARMCX6_chrX_101610125_101623000	ARMCX6	copy fasta	chrX	101610125	101623000
t0002	0/0	938	10	10	0	0	0	0	ARMCX6_chrX_101610125_101623000	ARMCX6	copy fasta	chrX	101610125	101623000
t0003	0/0	938	1	0	0	1	0	0	ARMCX6_chrX_101610125_101623000	ARMCX6	copy fasta	chrX	101610125	101623000
t0004	0/0	938	1	0	0	0	1	0	ARMCX6_chrX_101610125_101623000	ARMCX6	copy fasta	chrX	101610125	101623000
t0005	0/0	938	1	0	0	0	0	1	ARMCX6_chrX_101610125_101623000	ARMCX6	copy fasta	chrX	101610125	101623000

ghapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	chr	start	end
g0001	1/1	59	19	9	17	4	8	ARMCX6_chrX_101610125_101623000	ARMCX6	chrX	101610125	101623000
g0002	0/0	12	1	3	6	0	2	ARMCX6_chrX_101610125_101623000	ARMCX6	chrX	101610125	101623000
g0003	0/0	10	10	0	0	0	0	ARMCX6_chrX_101610125_101623000	ARMCX6	chrX	101610125	101623000
g0004	0/0	3	3	0	0	0	0	ARMCX6_chrX_101610125_101623000	ARMCX6	chrX	101610125	101623000
g0005	0/0	3	3	0	0	0	0	ARMCX6_chrX_101610125_101623000	ARMCX6	chrX	101610125	101623000
g0006	0/0	1	0	0	1	0	0	ARMCX6_chrX_101610125_101623000	ARMCX6	chrX	101610125	101623000
g0007	0/0	1	0	0	0	1	0	ARMCX6_chrX_101610125_101623000	ARMCX6	chrX	101610125	101623000
g0008	0/0	1	1	0	0	0	0	ARMCX6_chrX_101610125_101623000	ARMCX6	chrX	101610125	101623000
g0009	0/0	1	0	0	1	0	0	ARMCX6_chrX_101610125_101623000	ARMCX6	chrX	101610125	101623000
g0010	0/0	1	0	0	0	0	1	ARMCX6_chrX_101610125_101623000	ARMCX6	chrX	101610125	101623000
g0011	0/0	1	1	0	0	0	0	ARMCX6_chrX_101610125_101623000	ARMCX6	chrX	101610125	101623000
g0012	0/0	1	0	1	0	0	0	ARMCX6_chrX_101610125_101623000	ARMCX6	chrX	101610125	101623000

achapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	clen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	cseq	chr	start	end
a0001c0001	1/1	903	81	36	10	19	5	9	ARMCX6_chrX_101610125_101623000	ARMCX6	copy fasta	chrX	101610125	101623000
a0002c0002	0/0	903	12	1	3	6	0	2	ARMCX6_chrX_101610125_101623000	ARMCX6	copy fasta	chrX	101610125	101623000
a0003c0003	0/0	903	1	1	0	0	0	0	ARMCX6_chrX_101610125_101623000	ARMCX6	copy fasta	chrX	101610125	101623000

acthapid	grch38 chm13v2	tlen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	tseq	chr	start	end
a0001c0001t0001	1/1	1840	68	26	10	18	4	8	ARMCX6_chrX_101610125_101623000	ARMCX6	copy fasta	chrX	101610125	101623000
a0001c0001t0002	0/0	1840	10	10	0	0	0	0	ARMCX6_chrX_101610125_101623000	ARMCX6	copy fasta	chrX	101610125	101623000
a0001c0001t0003	0/0	1840	1	0	0	1	0	0	ARMCX6_chrX_101610125_101623000	ARMCX6	copy fasta	chrX	101610125	101623000
a0001c0001t0004	0/0	1840	1	0	0	0	1	0	ARMCX6_chrX_101610125_101623000	ARMCX6	copy fasta	chrX	101610125	101623000
a0001c0001t0005	0/0	1840	1	0	0	0	0	1	ARMCX6_chrX_101610125_101623000	ARMCX6	copy fasta	chrX	101610125	101623000
a0002c0002t0001	0/0	1840	12	1	3	6	0	2	ARMCX6_chrX_101610125_101623000	ARMCX6	copy fasta	chrX	101610125	101623000
a0003c0003t0001	0/0	1840	1	1	0	0	0	0	ARMCX6_chrX_101610125_101623000	ARMCX6	copy fasta	chrX	101610125	101623000

actghapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	chr	start	end
a0001c0001t0001g0001	1/1	59	19	9	17	4	8	ARMCX6_chrX_101610125_101623000	ARMCX6	chrX	101610125	101623000
a0001c0001t0001g0004	0/0	3	3	0	0	0	0	ARMCX6_chrX_101610125_101623000	ARMCX6	chrX	101610125	101623000
a0001c0001t0001g0005	0/0	3	3	0	0	0	0	ARMCX6_chrX_101610125_101623000	ARMCX6	chrX	101610125	101623000
a0001c0001t0001g0008	0/0	1	1	0	0	0	0	ARMCX6_chrX_101610125_101623000	ARMCX6	chrX	101610125	101623000
a0001c0001t0001g0009	0/0	1	0	0	1	0	0	ARMCX6_chrX_101610125_101623000	ARMCX6	chrX	101610125	101623000
a0001c0001t0001g0012	0/0	1	0	1	0	0	0	ARMCX6_chrX_101610125_101623000	ARMCX6	chrX	101610125	101623000
a0001c0001t0002g0003	0/0	10	10	0	0	0	0	ARMCX6_chrX_101610125_101623000	ARMCX6	chrX	101610125	101623000
a0001c0001t0003g0006	0/0	1	0	0	1	0	0	ARMCX6_chrX_101610125_101623000	ARMCX6	chrX	101610125	101623000
a0001c0001t0004g0007	0/0	1	0	0	0	1	0	ARMCX6_chrX_101610125_101623000	ARMCX6	chrX	101610125	101623000
a0001c0001t0005g0010	0/0	1	0	0	0	0	1	ARMCX6_chrX_101610125_101623000	ARMCX6	chrX	101610125	101623000
a0002c0002t0001g0002	0/0	12	1	3	6	0	2	ARMCX6_chrX_101610125_101623000	ARMCX6	chrX	101610125	101623000
a0003c0003t0001g0011	0/0	1	1	0	0	0	0	ARMCX6_chrX_101610125_101623000	ARMCX6	chrX	101610125	101623000

sampleid	ID haplotypeid	ahapid	chapid	thapid	ghapid	gpopname	popname	regionname	genename	chr	start	end
HG00140	hp1	a0001	c0001	t0001	g0001	EUR	GBR	ARMCX6_chrX_101610125_101623000	ARMCX6	chrX	101610125	101623000
HG00280	hp1	a0001	c0001	t0001	g0001	EUR	FIN	ARMCX6_chrX_101610125_101623000	ARMCX6	chrX	101610125	101623000
HG00621	hp1	a0001	c0001	t0001	g0001	EAS	CHS	ARMCX6_chrX_101610125_101623000	ARMCX6	chrX	101610125	101623000
HG00738	hp1	a0001	c0001	t0001	g0001	AMR	PUR	ARMCX6_chrX_101610125_101623000	ARMCX6	chrX	101610125	101623000
HG01069	hp1	a0001	c0001	t0001	g0001	AMR	PUR	ARMCX6_chrX_101610125_101623000	ARMCX6	chrX	101610125	101623000
HG01081	hp1	a0001	c0001	t0001	g0001	AMR	PUR	ARMCX6_chrX_101610125_101623000	ARMCX6	chrX	101610125	101623000
HG01081	hp2	a0001	c0001	t0001	g0001	AMR	PUR	ARMCX6_chrX_101610125_101623000	ARMCX6	chrX	101610125	101623000
HG01106	hp1	a0001	c0001	t0001	g0001	AMR	PUR	ARMCX6_chrX_101610125_101623000	ARMCX6	chrX	101610125	101623000
HG01109	hp1	a0001	c0001	t0001	g0001	AMR	PUR	ARMCX6_chrX_101610125_101623000	ARMCX6	chrX	101610125	101623000
HG01167	hp1	a0002	c0002	t0001	g0002	AMR	PUR	ARMCX6_chrX_101610125_101623000	ARMCX6	chrX	101610125	101623000
HG01169	hp1	a0002	c0002	t0001	g0002	AMR	PUR	ARMCX6_chrX_101610125_101623000	ARMCX6	chrX	101610125	101623000
HG01169	hp2	a0002	c0002	t0001	g0002	AMR	PUR	ARMCX6_chrX_101610125_101623000	ARMCX6	chrX	101610125	101623000
HG01192	hp1	a0001	c0001	t0001	g0001	AMR	PUR	ARMCX6_chrX_101610125_101623000	ARMCX6	chrX	101610125	101623000
HG01243	hp1	a0001	c0001	t0001	g0001	AMR	PUR	ARMCX6_chrX_101610125_101623000	ARMCX6	chrX	101610125	101623000
HG01255	hp1	a0001	c0001	t0001	g0012	AMR	CLM	ARMCX6_chrX_101610125_101623000	ARMCX6	chrX	101610125	101623000
HG01258	hp1	a0001	c0001	t0001	g0001	AMR	CLM	ARMCX6_chrX_101610125_101623000	ARMCX6	chrX	101610125	101623000
HG01515	hp1	a0001	c0001	t0001	g0001	EUR	IBS	ARMCX6_chrX_101610125_101623000	ARMCX6	chrX	101610125	101623000
HG01884	hp1	a0001	c0001	t0001	g0005	AFR	ACB	ARMCX6_chrX_101610125_101623000	ARMCX6	chrX	101610125	101623000
HG01884	hp2	a0002	c0002	t0001	g0002	AFR	ACB	ARMCX6_chrX_101610125_101623000	ARMCX6	chrX	101610125	101623000
HG02040	hp1	a0001	c0001	t0001	g0001	EAS	KHV	ARMCX6_chrX_101610125_101623000	ARMCX6	chrX	101610125	101623000
HG02055	hp1	a0001	c0001	t0002	g0003	AFR	ACB	ARMCX6_chrX_101610125_101623000	ARMCX6	chrX	101610125	101623000
HG02056	hp1	a0001	c0001	t0001	g0001	EAS	KHV	ARMCX6_chrX_101610125_101623000	ARMCX6	chrX	101610125	101623000
HG02071	hp1	a0002	c0002	t0001	g0002	EAS	KHV	ARMCX6_chrX_101610125_101623000	ARMCX6	chrX	101610125	101623000
HG02132	hp1	a0002	c0002	t0001	g0002	EAS	KHV	ARMCX6_chrX_101610125_101623000	ARMCX6	chrX	101610125	101623000
HG02258	hp1	a0001	c0001	t0002	g0003	AFR	ACB	ARMCX6_chrX_101610125_101623000	ARMCX6	chrX	101610125	101623000
HG02280	hp1	a0001	c0001	t0001	g0001	AFR	ACB	ARMCX6_chrX_101610125_101623000	ARMCX6	chrX	101610125	101623000
HG02280	hp2	a0001	c0001	t0002	g0003	AFR	ACB	ARMCX6_chrX_101610125_101623000	ARMCX6	chrX	101610125	101623000
HG02572	hp1	a0001	c0001	t0001	g0005	AFR	GWD	ARMCX6_chrX_101610125_101623000	ARMCX6	chrX	101610125	101623000
HG02622	hp1	a0001	c0001	t0001	g0001	AFR	GWD	ARMCX6_chrX_101610125_101623000	ARMCX6	chrX	101610125	101623000
HG02622	hp2	a0001	c0001	t0001	g0004	AFR	GWD	ARMCX6_chrX_101610125_101623000	ARMCX6	chrX	101610125	101623000
HG02630	hp1	a0001	c0001	t0002	g0003	AFR	GWD	ARMCX6_chrX_101610125_101623000	ARMCX6	chrX	101610125	101623000
HG02630	hp2	a0001	c0001	t0001	g0005	AFR	GWD	ARMCX6_chrX_101610125_101623000	ARMCX6	chrX	101610125	101623000
HG02698	hp1	a0001	c0001	t0001	g0001	SAS	PJL	ARMCX6_chrX_101610125_101623000	ARMCX6	chrX	101610125	101623000
HG02717	hp1	a0001	c0001	t0001	g0001	AFR	GWD	ARMCX6_chrX_101610125_101623000	ARMCX6	chrX	101610125	101623000
HG02735	hp1	a0001	c0001	t0001	g0001	SAS	PJL	ARMCX6_chrX_101610125_101623000	ARMCX6	chrX	101610125	101623000
HG02738	hp1	a0002	c0002	t0001	g0002	SAS	PJL	ARMCX6_chrX_101610125_101623000	ARMCX6	chrX	101610125	101623000
HG02895	hp1	a0001	c0001	t0001	g0004	AFR	GWD	ARMCX6_chrX_101610125_101623000	ARMCX6	chrX	101610125	101623000
HG02897	hp1	a0001	c0001	t0001	g0001	AFR	GWD	ARMCX6_chrX_101610125_101623000	ARMCX6	chrX	101610125	101623000
HG02897	hp2	a0001	c0001	t0001	g0004	AFR	GWD	ARMCX6_chrX_101610125_101623000	ARMCX6	chrX	101610125	101623000
HG02922	hp1	a0001	c0001	t0002	g0003	AFR	ESN	ARMCX6_chrX_101610125_101623000	ARMCX6	chrX	101610125	101623000
HG02922	hp2	a0001	c0001	t0002	g0003	AFR	ESN	ARMCX6_chrX_101610125_101623000	ARMCX6	chrX	101610125	101623000
HG02976	hp1	a0001	c0001	t0002	g0003	AFR	ESN	ARMCX6_chrX_101610125_101623000	ARMCX6	chrX	101610125	101623000
HG02976	hp2	a0001	c0001	t0001	g0001	AFR	ESN	ARMCX6_chrX_101610125_101623000	ARMCX6	chrX	101610125	101623000
HG03041	hp1	a0001	c0001	t0001	g0001	AFR	GWD	ARMCX6_chrX_101610125_101623000	ARMCX6	chrX	101610125	101623000
HG03041	hp2	a0001	c0001	t0001	g0001	AFR	GWD	ARMCX6_chrX_101610125_101623000	ARMCX6	chrX	101610125	101623000
HG03098	hp1	a0001	c0001	t0002	g0003	AFR	MSL	ARMCX6_chrX_101610125_101623000	ARMCX6	chrX	101610125	101623000
HG03130	hp1	a0001	c0001	t0002	g0003	AFR	ESN	ARMCX6_chrX_101610125_101623000	ARMCX6	chrX	101610125	101623000
HG03209	hp1	a0001	c0001	t0001	g0001	AFR	MSL	ARMCX6_chrX_101610125_101623000	ARMCX6	chrX	101610125	101623000
HG03486	hp1	a0001	c0001	t0002	g0003	AFR	MSL	ARMCX6_chrX_101610125_101623000	ARMCX6	chrX	101610125	101623000
HG03486	hp2	a0001	c0001	t0001	g0001	AFR	MSL	ARMCX6_chrX_101610125_101623000	ARMCX6	chrX	101610125	101623000
HG03490	hp1	a0001	c0001	t0001	g0001	SAS	PJL	ARMCX6_chrX_101610125_101623000	ARMCX6	chrX	101610125	101623000
HG03492	hp1	a0001	c0001	t0001	g0001	SAS	PJL	ARMCX6_chrX_101610125_101623000	ARMCX6	chrX	101610125	101623000
HG03516	hp1	a0001	c0001	t0001	g0008	AFR	ESN	ARMCX6_chrX_101610125_101623000	ARMCX6	chrX	101610125	101623000
HG03516	hp2	a0001	c0001	t0001	g0001	AFR	ESN	ARMCX6_chrX_101610125_101623000	ARMCX6	chrX	101610125	101623000
HG03579	hp1	a0003	c0003	t0001	g0011	AFR	MSL	ARMCX6_chrX_101610125_101623000	ARMCX6	chrX	101610125	101623000
HG03669	hp1	a0001	c0001	t0005	g0010	SAS	PJL	ARMCX6_chrX_101610125_101623000	ARMCX6	chrX	101610125	101623000
HG03669	hp2	a0001	c0001	t0001	g0001	SAS	PJL	ARMCX6_chrX_101610125_101623000	ARMCX6	chrX	101610125	101623000
HG03688	hp1	a0001	c0001	t0001	g0001	SAS	STU	ARMCX6_chrX_101610125_101623000	ARMCX6	chrX	101610125	101623000
HG03710	hp1	a0001	c0001	t0001	g0001	SAS	PJL	ARMCX6_chrX_101610125_101623000	ARMCX6	chrX	101610125	101623000
HG04115	hp1	a0002	c0002	t0001	g0002	SAS	STU	ARMCX6_chrX_101610125_101623000	ARMCX6	chrX	101610125	101623000
HG04204	hp1	a0001	c0001	t0001	g0001	SAS	STU	ARMCX6_chrX_101610125_101623000	ARMCX6	chrX	101610125	101623000
NA18612	hp1	a0001	c0001	t0001	g0001	EAS	CHB	ARMCX6_chrX_101610125_101623000	ARMCX6	chrX	101610125	101623000
NA18906	hp1	a0001	c0001	t0001	g0001	AFR	YRI	ARMCX6_chrX_101610125_101623000	ARMCX6	chrX	101610125	101623000
NA18906	hp2	a0001	c0001	t0001	g0001	AFR	YRI	ARMCX6_chrX_101610125_101623000	ARMCX6	chrX	101610125	101623000
NA18941	hp1	a0001	c0001	t0001	g0001	EAS	JPT	ARMCX6_chrX_101610125_101623000	ARMCX6	chrX	101610125	101623000
NA18941	hp2	a0001	c0001	t0001	g0001	EAS	JPT	ARMCX6_chrX_101610125_101623000	ARMCX6	chrX	101610125	101623000
NA18943	hp1	a0001	c0001	t0001	g0001	EAS	JPT	ARMCX6_chrX_101610125_101623000	ARMCX6	chrX	101610125	101623000
NA18945	hp1	a0001	c0001	t0001	g0009	EAS	JPT	ARMCX6_chrX_101610125_101623000	ARMCX6	chrX	101610125	101623000
NA18948	hp1	a0001	c0001	t0001	g0001	EAS	JPT	ARMCX6_chrX_101610125_101623000	ARMCX6	chrX	101610125	101623000
NA18971	hp1	a0002	c0002	t0001	g0002	EAS	JPT	ARMCX6_chrX_101610125_101623000	ARMCX6	chrX	101610125	101623000
NA18984	hp1	a0001	c0001	t0001	g0001	EAS	JPT	ARMCX6_chrX_101610125_101623000	ARMCX6	chrX	101610125	101623000
NA18989	hp1	a0001	c0001	t0001	g0001	EAS	JPT	ARMCX6_chrX_101610125_101623000	ARMCX6	chrX	101610125	101623000
NA19004	hp1	a0002	c0002	t0001	g0002	EAS	JPT	ARMCX6_chrX_101610125_101623000	ARMCX6	chrX	101610125	101623000
NA19006	hp1	a0001	c0001	t0001	g0001	EAS	JPT	ARMCX6_chrX_101610125_101623000	ARMCX6	chrX	101610125	101623000
NA19007	hp1	a0001	c0001	t0001	g0001	EAS	JPT	ARMCX6_chrX_101610125_101623000	ARMCX6	chrX	101610125	101623000
NA19009	hp1	a0001	c0001	t0003	g0006	EAS	JPT	ARMCX6_chrX_101610125_101623000	ARMCX6	chrX	101610125	101623000
NA19030	hp1	a0001	c0001	t0001	g0001	AFR	LWK	ARMCX6_chrX_101610125_101623000	ARMCX6	chrX	101610125	101623000
NA19030	hp2	a0001	c0001	t0001	g0001	AFR	LWK	ARMCX6_chrX_101610125_101623000	ARMCX6	chrX	101610125	101623000
NA19043	hp1	a0001	c0001	t0001	g0001	AFR	LWK	ARMCX6_chrX_101610125_101623000	ARMCX6	chrX	101610125	101623000
NA19065	hp1	a0001	c0001	t0001	g0001	EAS	JPT	ARMCX6_chrX_101610125_101623000	ARMCX6	chrX	101610125	101623000
NA19065	hp2	a0002	c0002	t0001	g0002	EAS	JPT	ARMCX6_chrX_101610125_101623000	ARMCX6	chrX	101610125	101623000
NA19066	hp1	a0002	c0002	t0001	g0002	EAS	JPT	ARMCX6_chrX_101610125_101623000	ARMCX6	chrX	101610125	101623000
NA19070	hp1	a0001	c0001	t0001	g0001	EAS	JPT	ARMCX6_chrX_101610125_101623000	ARMCX6	chrX	101610125	101623000
NA19076	hp1	a0001	c0001	t0001	g0001	EAS	JPT	ARMCX6_chrX_101610125_101623000	ARMCX6	chrX	101610125	101623000
NA19083	hp1	a0001	c0001	t0001	g0001	EAS	JPT	ARMCX6_chrX_101610125_101623000	ARMCX6	chrX	101610125	101623000
NA19086	hp1	a0001	c0001	t0001	g0001	EAS	JPT	ARMCX6_chrX_101610125_101623000	ARMCX6	chrX	101610125	101623000
NA20129	hp1	a0001	c0001	t0001	g0001	AFR	ASW	ARMCX6_chrX_101610125_101623000	ARMCX6	chrX	101610125	101623000
NA20129	hp2	a0001	c0001	t0001	g0001	AFR	ASW	ARMCX6_chrX_101610125_101623000	ARMCX6	chrX	101610125	101623000
NA20752	hp1	a0001	c0001	t0004	g0007	EUR	TSI	ARMCX6_chrX_101610125_101623000	ARMCX6	chrX	101610125	101623000
NA20805	hp1	a0001	c0001	t0001	g0001	EUR	TSI	ARMCX6_chrX_101610125_101623000	ARMCX6	chrX	101610125	101623000
HG02486	hp1	a0001	c0001	t0001	g0001	AFR	ACB	ARMCX6_chrX_101610125_101623000	ARMCX6	chrX	101610125	101623000
HG03471	hp1	a0001	c0001	t0001	g0001	AFR	MSL	ARMCX6_chrX_101610125_101623000	ARMCX6	chrX	101610125	101623000
homoSapiens_chm13v2	hp1	a0001	c0001	t0001	g0001	REF	REF	ARMCX6_chrX_101610125_101623000	ARMCX6	chrX	101610125	101623000
homoSapiens_grch38	hp1	a0001	c0001	t0001	g0001	REF	REF	ARMCX6_chrX_101610125_101623000	ARMCX6	chrX	101610125	101623000

chr:pos	ref	alt	# # of ahapid:amino-acid(protein) level	ahapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	hgvs_p	genename	geneid	featuretype	featureid	transcript_biotype	rank	cdna cdna pos length	cds cds pos length	aa aa pos length	distance	status	chr	pos
chrX:101616158	T T	C C	1	a0002 a0002	12	HG01167.hp1 HG01169.hp1 HG01169.hp2 others(9): Show HG01167.hp1 HG01169.hp1 HG01169.hp2 HG01884.hp2 HG02071.hp1 HG02132.hp1 HG02738.hp1 HG04115.hp1 NA18971.hp1 NA19004.hp1 NA19065.hp2 NA19066.hp1	missense_variant	MODERATE	c.463A>G c.463A>G	p.Ser155Gly p.Ser155Gly	ARMCX6	ENSG00000198960.11	transcript	ENST00000361910.9	protein_coding	3/3	807/1840	463/903	155/300			chrX	101616158
chrX:101616166	T T	C C	1	a0003 a0003	1	HG03579.hp1 HG03579.hp1	missense_variant	MODERATE	c.455A>G c.455A>G	p.Asp152Gly p.Asp152Gly	ARMCX6	ENSG00000198960.11	transcript	ENST00000361910.9	protein_coding	3/3	799/1840	455/903	152/300			chrX	101616166

chr:pos	ref	alt	# # of chapid	chapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	hgvs_p	genename	geneid	featuretype	featureid	transcript_biotype	rank	cdna cdna pos length	cds cds pos length	aa aa pos length	distance	status	chr	pos

chr:pos	ref	alt	# # of thapid:transcript level	thapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	chr	pos
chrX:101615254	G G	A A	1	a0001c0001t0005 a0001c0001t0005	1	HG03669.hp1 HG03669.hp1	3_prime_UTR_variant	MODIFIER	c.464C>T c.464C>T	ARMCX6	ENSG00000198960.11	transcript	ENST00000361910.9	protein_coding	3/3	464	chrX	101615254
chrX:101615334	C C	G G	1	a0001c0001t0002 a0001c0001t0002	10	HG02055.hp1 HG02258.hp1 HG02280.hp2 others(7): Show HG02055.hp1 HG02258.hp1 HG02280.hp2 HG02630.hp1 HG02922.hp1 HG02922.hp2 HG02976.hp1 HG03098.hp1 HG03130.hp1 HG03486.hp1	3_prime_UTR_variant	MODIFIER	c.384G>C c.384G>C	ARMCX6	ENSG00000198960.11	transcript	ENST00000361910.9	protein_coding	3/3	384	chrX	101615334
chrX:101617897	A A	G G	1	a0001c0001t0004 a0001c0001t0004	1	NA20752.hp1 NA20752.hp1	5_prime_UTR_variant	MODIFIER	c.-241T>C c.-241T>C	ARMCX6	ENSG00000198960.11	transcript	ENST00000361910.9	protein_coding	1/3	1277	chrX	101617897
chrX:101617947	A A	G G	1	a0001c0001t0003 a0001c0001t0003	1	NA19009.hp1 NA19009.hp1	5_prime_UTR_variant	MODIFIER	c.-291T>C c.-291T>C	ARMCX6	ENSG00000198960.11	transcript	ENST00000361910.9	protein_coding	1/3	1327	chrX	101617947

chr:pos	ref	alt	# # of ghapid:genebody level	ghapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	genename	geneid	featuretype	featureid	genebody_biotype	rank	chr	pos
chrX:101616795	G G	A A	1	a0001c0001t0001g0005 a0001c0001t0001g0005	3	HG01884.hp1 HG02572.hp1 HG02630.hp2 HG01884.hp1 HG02572.hp1 HG02630.hp2	intron_variant	MODIFIER	c.-146-29C>T c.-146-29C>T	ARMCX6	ENSG00000198960.11	transcript	ENST00000361910.9	protein_coding	2/2	chrX	101616795
chrX:101616807	G G	C C	1	a0001c0001t0001g0012 a0001c0001t0001g0012	1	HG01255.hp1 HG01255.hp1	intron_variant	MODIFIER	c.-146-41C>G c.-146-41C>G	ARMCX6	ENSG00000198960.11	transcript	ENST00000361910.9	protein_coding	2/2	chrX	101616807
chrX:101616811	T T	G G	2	a0001c0001t0001g0004 a0001c0001t0001g0005 a0001c0001t0001g0004 a0001c0001t0001g0005	6	HG01884.hp1 HG02572.hp1 HG02622.hp2 others(3): Show HG01884.hp1 HG02572.hp1 HG02622.hp2 HG02630.hp2 HG02895.hp1 HG02897.hp2	intron_variant	MODIFIER	c.-146-45A>C c.-146-45A>C	ARMCX6	ENSG00000198960.11	transcript	ENST00000361910.9	protein_coding	2/2	chrX	101616811
chrX:101617483	A A	G G	1	a0001c0001t0001g0009 a0001c0001t0001g0009	1	NA18945.hp1 NA18945.hp1	intron_variant	MODIFIER	c.-147+20T>C c.-147+20T>C	ARMCX6	ENSG00000198960.11	transcript	ENST00000361910.9	protein_coding	2/2	chrX	101617483
chrX:101617679	A A	G G	1	a0001c0001t0001g0008 a0001c0001t0001g0008	1	HG03516.hp1 HG03516.hp1	intron_variant	MODIFIER	c.-228-95T>C c.-228-95T>C	ARMCX6	ENSG00000198960.11	transcript	ENST00000361910.9	protein_coding	1/2	chrX	101617679

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🧬 JoGo Online Haplotype Explorer ARMCX6_chrX_101610125_101623000

JoGo Local Haplotype Explorer (on iGV) ARMCX6_chrX_101610125_101623000

Translation Multiple Alignment View

ACTG-Haplotype Mutation Positions 3D Viewer

🧬 Gene Summary

AAmino acid(protein) Level Haplotype Info (Total: 3)

CCoding Level Haplotype Info (Total: 3)

TTranscript Level Haplotype Info (Total: 5)

GGenebody Level Haplotype Info (Total: 12)

A C AC Level (Amino Acid + Coding) Haplotype Info (Total: 3)

A C T ACT Level (Amino Acid + Coding + Transcript) Haplotype Info (Total: 7)

A C T G ACTG Level (Amino Acid + Coding + Transcript + Genebody) Haplotype Info (Total: 12)

Haplotype Details by Sample (Haploid Level) (Total: 94)

AAmino acid(protein) Level Haplotype Related Variants (Effect to Protein Coding Variants) (Total: 2)

CCoding Level Variants (Synonymous Mutations) (Total: 0)

TTranscript Level Haplotype Variants (5'UTR+3'UTR) (Total: 4)

GGenebody Level Haplotype Variants (Intron) (Total: 5)

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Annotation (Repeats)

Annotation (SNP Array)