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ALDH2_chr12_111761933_111822532 / BRCA1_chr17_43039295_43130364 etc.

  Error connecting to IGV?   TAF11L8_chr5_17585364_17595960  TAF11L8_chr5_17585364_17595960 (clean+top1000)

Multiple Alignments (by translate haplotype frequency)Multiple Alignments (by aa haplotype frequency) Multiple Alignments (by translate haplotype similarity)Multiple Alignments (by aa haplotype similarity)

Item Value
geneid 112488737
ensemblid ENSG00000283967.1
hgncid 53851
symbol TAF11L8
name TATA-box binding protein associated factor 11 like 8
refseq_nuc NM_001401681.1
refseq_prot NP_001388610.1
ensembl_nuc ENST00000640803.1
ensembl_prot ENSP00000491174.1
mane_status MANE Select
chr chr5
start 17590364
end 17590960
strand -
ver v1.2
region chr5:17590364-17590960
region5000 chr5:17585364-17595960
regionname0 TAF11L8_chr5_17590364_17590960
regionname5000 TAF11L8_chr5_17585364_17595960

ahapid grch38/
chm13v2 		alen total AFR AMR EAS EUR SAS JPT regionname genename aa chr start end
a0001 0/0 198 94 15 15 58 0 6 40 TAF11L8_chr5_17585364_17595960 TAF11L8 copy fasta chr5 17585364 17595960
a0002 0/0 198 3 0 1 2 0 0 2 TAF11L8_chr5_17585364_17595960 TAF11L8 copy fasta chr5 17585364 17595960
a0003 0/0 198 1 0 0 1 0 0 0 TAF11L8_chr5_17585364_17595960 TAF11L8 copy fasta chr5 17585364 17595960
a0004 0/0 198 1 1 0 0 0 0 0 TAF11L8_chr5_17585364_17595960 TAF11L8 copy fasta chr5 17585364 17595960
a0005 0/0 198 1 1 0 0 0 0 0 TAF11L8_chr5_17585364_17595960 TAF11L8 copy fasta chr5 17585364 17595960
a0006 0/0 198 1 1 0 0 0 0 0 TAF11L8_chr5_17585364_17595960 TAF11L8 copy fasta chr5 17585364 17595960
a0007 0/0 198 1 0 0 1 0 0 0 TAF11L8_chr5_17585364_17595960 TAF11L8 copy fasta chr5 17585364 17595960

chapid grch38/
chm13v2 		clen total AFR AMR EAS EUR SAS regionname genename cseq chr start end
c0001 0/0 597 89 12 14 57 0 6 TAF11L8_chr5_17585364_17595960 TAF11L8 copy fasta chr5 17585364 17595960
c0002 0/0 597 3 3 0 0 0 0 TAF11L8_chr5_17585364_17595960 TAF11L8 copy fasta chr5 17585364 17595960
c0003 0/0 597 3 0 1 2 0 0 TAF11L8_chr5_17585364_17595960 TAF11L8 copy fasta chr5 17585364 17595960
c0004 0/0 597 1 0 0 1 0 0 TAF11L8_chr5_17585364_17595960 TAF11L8 copy fasta chr5 17585364 17595960
c0005 0/0 597 1 1 0 0 0 0 TAF11L8_chr5_17585364_17595960 TAF11L8 copy fasta chr5 17585364 17595960
c0006 0/0 597 1 0 0 1 0 0 TAF11L8_chr5_17585364_17595960 TAF11L8 copy fasta chr5 17585364 17595960
c0007 0/0 597 1 1 0 0 0 0 TAF11L8_chr5_17585364_17595960 TAF11L8 copy fasta chr5 17585364 17595960
c0008 0/0 597 1 1 0 0 0 0 TAF11L8_chr5_17585364_17595960 TAF11L8 copy fasta chr5 17585364 17595960
c0009 0/0 597 1 0 1 0 0 0 TAF11L8_chr5_17585364_17595960 TAF11L8 copy fasta chr5 17585364 17595960
c0010 0/0 597 1 0 0 1 0 0 TAF11L8_chr5_17585364_17595960 TAF11L8 copy fasta chr5 17585364 17595960

thapid grch38
chm13v2 		tlen total AFR AMR EAS EUR SAS regionname genename tseq chr start end

ghapid grch38/
chm13v2 		total AFR AMR EAS EUR SAS regionname genename chr start end
g0000 0/0 102 18 16 62 0 6 TAF11L8_chr5_17585364_17595960 TAF11L8 chr5 17585364 17595960

achapid grch38/
chm13v2 		clen total AFR AMR EAS EUR SAS regionname genename cseq chr start end
a0001c0001 0/0 597 89 12 14 57 0 6 TAF11L8_chr5_17585364_17595960 TAF11L8 copy fasta chr5 17585364 17595960
a0001c0002 0/0 597 3 3 0 0 0 0 TAF11L8_chr5_17585364_17595960 TAF11L8 copy fasta chr5 17585364 17595960
a0001c0006 0/0 597 1 0 0 1 0 0 TAF11L8_chr5_17585364_17595960 TAF11L8 copy fasta chr5 17585364 17595960
a0001c0009 0/0 597 1 0 1 0 0 0 TAF11L8_chr5_17585364_17595960 TAF11L8 copy fasta chr5 17585364 17595960
a0002c0003 0/0 597 3 0 1 2 0 0 TAF11L8_chr5_17585364_17595960 TAF11L8 copy fasta chr5 17585364 17595960
a0003c0010 0/0 597 1 0 0 1 0 0 TAF11L8_chr5_17585364_17595960 TAF11L8 copy fasta chr5 17585364 17595960
a0004c0007 0/0 597 1 1 0 0 0 0 TAF11L8_chr5_17585364_17595960 TAF11L8 copy fasta chr5 17585364 17595960
a0005c0008 0/0 597 1 1 0 0 0 0 TAF11L8_chr5_17585364_17595960 TAF11L8 copy fasta chr5 17585364 17595960
a0006c0005 0/0 597 1 1 0 0 0 0 TAF11L8_chr5_17585364_17595960 TAF11L8 copy fasta chr5 17585364 17595960
a0007c0004 0/0 597 1 0 0 1 0 0 TAF11L8_chr5_17585364_17595960 TAF11L8 copy fasta chr5 17585364 17595960

acthapid grch38
chm13v2 		tlen total AFR AMR EAS EUR SAS regionname genename tseq chr start end
a0001c0001t0000 0/0 597 89 12 14 57 0 6 TAF11L8_chr5_17585364_17595960 TAF11L8 copy fasta chr5 17585364 17595960
a0001c0002t0000 0/0 597 3 3 0 0 0 0 TAF11L8_chr5_17585364_17595960 TAF11L8 copy fasta chr5 17585364 17595960
a0001c0006t0000 0/0 597 1 0 0 1 0 0 TAF11L8_chr5_17585364_17595960 TAF11L8 copy fasta chr5 17585364 17595960
a0001c0009t0000 0/0 597 1 0 1 0 0 0 TAF11L8_chr5_17585364_17595960 TAF11L8 copy fasta chr5 17585364 17595960
a0002c0003t0000 0/0 597 3 0 1 2 0 0 TAF11L8_chr5_17585364_17595960 TAF11L8 copy fasta chr5 17585364 17595960
a0003c0010t0000 0/0 597 1 0 0 1 0 0 TAF11L8_chr5_17585364_17595960 TAF11L8 copy fasta chr5 17585364 17595960
a0004c0007t0000 0/0 597 1 1 0 0 0 0 TAF11L8_chr5_17585364_17595960 TAF11L8 copy fasta chr5 17585364 17595960
a0005c0008t0000 0/0 597 1 1 0 0 0 0 TAF11L8_chr5_17585364_17595960 TAF11L8 copy fasta chr5 17585364 17595960
a0006c0005t0000 0/0 597 1 1 0 0 0 0 TAF11L8_chr5_17585364_17595960 TAF11L8 copy fasta chr5 17585364 17595960
a0007c0004t0000 0/0 597 1 0 0 1 0 0 TAF11L8_chr5_17585364_17595960 TAF11L8 copy fasta chr5 17585364 17595960

actghapid grch38/
chm13v2 		total AFR AMR EAS EUR SAS regionname genename chr start end
a0001c0001t0000g0000 0/0 89 12 14 57 0 6 TAF11L8_chr5_17585364_17595960 TAF11L8 chr5 17585364 17595960
a0001c0002t0000g0000 0/0 3 3 0 0 0 0 TAF11L8_chr5_17585364_17595960 TAF11L8 chr5 17585364 17595960
a0001c0006t0000g0000 0/0 1 0 0 1 0 0 TAF11L8_chr5_17585364_17595960 TAF11L8 chr5 17585364 17595960
a0001c0009t0000g0000 0/0 1 0 1 0 0 0 TAF11L8_chr5_17585364_17595960 TAF11L8 chr5 17585364 17595960
a0002c0003t0000g0000 0/0 3 0 1 2 0 0 TAF11L8_chr5_17585364_17595960 TAF11L8 chr5 17585364 17595960
a0003c0010t0000g0000 0/0 1 0 0 1 0 0 TAF11L8_chr5_17585364_17595960 TAF11L8 chr5 17585364 17595960
a0004c0007t0000g0000 0/0 1 1 0 0 0 0 TAF11L8_chr5_17585364_17595960 TAF11L8 chr5 17585364 17595960
a0005c0008t0000g0000 0/0 1 1 0 0 0 0 TAF11L8_chr5_17585364_17595960 TAF11L8 chr5 17585364 17595960
a0006c0005t0000g0000 0/0 1 1 0 0 0 0 TAF11L8_chr5_17585364_17595960 TAF11L8 chr5 17585364 17595960
a0007c0004t0000g0000 0/0 1 0 0 1 0 0 TAF11L8_chr5_17585364_17595960 TAF11L8 chr5 17585364 17595960

sampleid ID
haplotypeid
 ahapid chapid thapid ghapid gpopname popname regionname genename chr start end
HG00408 hp1 a0001 c0001 t0000 g0000 EAS CHS TAF11L8_chr5_17585364_17595960 TAF11L8 chr5 17585364 17595960
HG00408 hp2 a0001 c0001 t0000 g0000 EAS CHS TAF11L8_chr5_17585364_17595960 TAF11L8 chr5 17585364 17595960
HG00438 hp1 a0001 c0001 t0000 g0000 EAS CHS TAF11L8_chr5_17585364_17595960 TAF11L8 chr5 17585364 17595960
HG00438 hp2 a0003 c0010 t0000 g0000 EAS CHS TAF11L8_chr5_17585364_17595960 TAF11L8 chr5 17585364 17595960
HG00558 hp1 a0001 c0001 t0000 g0000 EAS CHS TAF11L8_chr5_17585364_17595960 TAF11L8 chr5 17585364 17595960
HG00558 hp2 a0001 c0001 t0000 g0000 EAS CHS TAF11L8_chr5_17585364_17595960 TAF11L8 chr5 17585364 17595960
HG00621 hp1 a0001 c0001 t0000 g0000 EAS CHS TAF11L8_chr5_17585364_17595960 TAF11L8 chr5 17585364 17595960
HG00621 hp2 a0001 c0001 t0000 g0000 EAS CHS TAF11L8_chr5_17585364_17595960 TAF11L8 chr5 17585364 17595960
HG00735 hp1 a0001 c0001 t0000 g0000 AMR PUR TAF11L8_chr5_17585364_17595960 TAF11L8 chr5 17585364 17595960
HG00735 hp2 a0001 c0001 t0000 g0000 AMR PUR TAF11L8_chr5_17585364_17595960 TAF11L8 chr5 17585364 17595960
HG00738 hp1 a0001 c0001 t0000 g0000 AMR PUR TAF11L8_chr5_17585364_17595960 TAF11L8 chr5 17585364 17595960
HG00738 hp2 a0002 c0003 t0000 g0000 AMR PUR TAF11L8_chr5_17585364_17595960 TAF11L8 chr5 17585364 17595960
HG01071 hp1 a0001 c0001 t0000 g0000 AMR PUR TAF11L8_chr5_17585364_17595960 TAF11L8 chr5 17585364 17595960
HG01071 hp2 a0001 c0001 t0000 g0000 AMR PUR TAF11L8_chr5_17585364_17595960 TAF11L8 chr5 17585364 17595960
HG01074 hp1 a0001 c0001 t0000 g0000 AMR PUR TAF11L8_chr5_17585364_17595960 TAF11L8 chr5 17585364 17595960
HG01074 hp2 a0001 c0001 t0000 g0000 AMR PUR TAF11L8_chr5_17585364_17595960 TAF11L8 chr5 17585364 17595960
HG01109 hp1 a0001 c0001 t0000 g0000 AMR PUR TAF11L8_chr5_17585364_17595960 TAF11L8 chr5 17585364 17595960
HG01109 hp2 a0001 c0001 t0000 g0000 AMR PUR TAF11L8_chr5_17585364_17595960 TAF11L8 chr5 17585364 17595960
HG01192 hp1 a0001 c0001 t0000 g0000 AMR PUR TAF11L8_chr5_17585364_17595960 TAF11L8 chr5 17585364 17595960
HG01192 hp2 a0001 c0009 t0000 g0000 AMR PUR TAF11L8_chr5_17585364_17595960 TAF11L8 chr5 17585364 17595960
HG01978 hp1 a0001 c0001 t0000 g0000 AMR PEL TAF11L8_chr5_17585364_17595960 TAF11L8 chr5 17585364 17595960
HG01978 hp2 a0001 c0001 t0000 g0000 AMR PEL TAF11L8_chr5_17585364_17595960 TAF11L8 chr5 17585364 17595960
HG01981 hp1 a0001 c0001 t0000 g0000 AMR PEL TAF11L8_chr5_17585364_17595960 TAF11L8 chr5 17585364 17595960
HG01981 hp2 a0001 c0001 t0000 g0000 AMR PEL TAF11L8_chr5_17585364_17595960 TAF11L8 chr5 17585364 17595960
HG02040 hp1 a0001 c0001 t0000 g0000 EAS KHV TAF11L8_chr5_17585364_17595960 TAF11L8 chr5 17585364 17595960
HG02040 hp2 a0001 c0001 t0000 g0000 EAS KHV TAF11L8_chr5_17585364_17595960 TAF11L8 chr5 17585364 17595960
HG02056 hp1 a0001 c0001 t0000 g0000 EAS KHV TAF11L8_chr5_17585364_17595960 TAF11L8 chr5 17585364 17595960
HG02056 hp2 a0001 c0001 t0000 g0000 EAS KHV TAF11L8_chr5_17585364_17595960 TAF11L8 chr5 17585364 17595960
HG02080 hp1 a0001 c0001 t0000 g0000 EAS KHV TAF11L8_chr5_17585364_17595960 TAF11L8 chr5 17585364 17595960
HG02080 hp2 a0001 c0001 t0000 g0000 EAS KHV TAF11L8_chr5_17585364_17595960 TAF11L8 chr5 17585364 17595960
HG02132 hp1 a0001 c0001 t0000 g0000 EAS KHV TAF11L8_chr5_17585364_17595960 TAF11L8 chr5 17585364 17595960
HG02132 hp2 a0001 c0001 t0000 g0000 EAS KHV TAF11L8_chr5_17585364_17595960 TAF11L8 chr5 17585364 17595960
HG02280 hp1 a0001 c0001 t0000 g0000 AFR ACB TAF11L8_chr5_17585364_17595960 TAF11L8 chr5 17585364 17595960
HG02280 hp2 a0001 c0002 t0000 g0000 AFR ACB TAF11L8_chr5_17585364_17595960 TAF11L8 chr5 17585364 17595960
HG02523 hp1 a0007 c0004 t0000 g0000 EAS KHV TAF11L8_chr5_17585364_17595960 TAF11L8 chr5 17585364 17595960
HG02523 hp2 a0001 c0001 t0000 g0000 EAS KHV TAF11L8_chr5_17585364_17595960 TAF11L8 chr5 17585364 17595960
HG02622 hp1 a0004 c0007 t0000 g0000 AFR GWD TAF11L8_chr5_17585364_17595960 TAF11L8 chr5 17585364 17595960
HG02622 hp2 a0001 c0001 t0000 g0000 AFR GWD TAF11L8_chr5_17585364_17595960 TAF11L8 chr5 17585364 17595960
HG02630 hp1 a0001 c0001 t0000 g0000 AFR GWD TAF11L8_chr5_17585364_17595960 TAF11L8 chr5 17585364 17595960
HG02630 hp2 a0001 c0001 t0000 g0000 AFR GWD TAF11L8_chr5_17585364_17595960 TAF11L8 chr5 17585364 17595960
HG02647 hp1 a0001 c0001 t0000 g0000 AFR GWD TAF11L8_chr5_17585364_17595960 TAF11L8 chr5 17585364 17595960
HG02647 hp2 a0001 c0002 t0000 g0000 AFR GWD TAF11L8_chr5_17585364_17595960 TAF11L8 chr5 17585364 17595960
HG02897 hp1 a0001 c0001 t0000 g0000 AFR GWD TAF11L8_chr5_17585364_17595960 TAF11L8 chr5 17585364 17595960
HG02897 hp2 a0001 c0001 t0000 g0000 AFR GWD TAF11L8_chr5_17585364_17595960 TAF11L8 chr5 17585364 17595960
HG02965 hp1 a0001 c0002 t0000 g0000 AFR ESN TAF11L8_chr5_17585364_17595960 TAF11L8 chr5 17585364 17595960
HG02965 hp2 a0001 c0001 t0000 g0000 AFR ESN TAF11L8_chr5_17585364_17595960 TAF11L8 chr5 17585364 17595960
HG03017 hp1 a0001 c0001 t0000 g0000 SAS PJL TAF11L8_chr5_17585364_17595960 TAF11L8 chr5 17585364 17595960
HG03017 hp2 a0001 c0001 t0000 g0000 SAS PJL TAF11L8_chr5_17585364_17595960 TAF11L8 chr5 17585364 17595960
HG03492 hp1 a0001 c0001 t0000 g0000 SAS PJL TAF11L8_chr5_17585364_17595960 TAF11L8 chr5 17585364 17595960
HG03492 hp2 a0001 c0001 t0000 g0000 SAS PJL TAF11L8_chr5_17585364_17595960 TAF11L8 chr5 17585364 17595960
HG03579 hp1 a0005 c0008 t0000 g0000 AFR MSL TAF11L8_chr5_17585364_17595960 TAF11L8 chr5 17585364 17595960
HG03579 hp2 a0001 c0001 t0000 g0000 AFR MSL TAF11L8_chr5_17585364_17595960 TAF11L8 chr5 17585364 17595960
HG04228 hp1 a0001 c0001 t0000 g0000 SAS STU TAF11L8_chr5_17585364_17595960 TAF11L8 chr5 17585364 17595960
HG04228 hp2 a0001 c0001 t0000 g0000 SAS STU TAF11L8_chr5_17585364_17595960 TAF11L8 chr5 17585364 17595960
NA18747 hp1 a0001 c0001 t0000 g0000 EAS CHB TAF11L8_chr5_17585364_17595960 TAF11L8 chr5 17585364 17595960
NA18747 hp2 a0001 c0001 t0000 g0000 EAS CHB TAF11L8_chr5_17585364_17595960 TAF11L8 chr5 17585364 17595960
NA18942 hp1 a0001 c0001 t0000 g0000 EAS JPT TAF11L8_chr5_17585364_17595960 TAF11L8 chr5 17585364 17595960
NA18942 hp2 a0001 c0001 t0000 g0000 EAS JPT TAF11L8_chr5_17585364_17595960 TAF11L8 chr5 17585364 17595960
NA18948 hp1 a0001 c0001 t0000 g0000 EAS JPT TAF11L8_chr5_17585364_17595960 TAF11L8 chr5 17585364 17595960
NA18948 hp2 a0001 c0001 t0000 g0000 EAS JPT TAF11L8_chr5_17585364_17595960 TAF11L8 chr5 17585364 17595960
NA18954 hp1 a0001 c0001 t0000 g0000 EAS JPT TAF11L8_chr5_17585364_17595960 TAF11L8 chr5 17585364 17595960
NA18954 hp2 a0001 c0001 t0000 g0000 EAS JPT TAF11L8_chr5_17585364_17595960 TAF11L8 chr5 17585364 17595960
NA18959 hp1 a0001 c0001 t0000 g0000 EAS JPT TAF11L8_chr5_17585364_17595960 TAF11L8 chr5 17585364 17595960
NA18959 hp2 a0001 c0001 t0000 g0000 EAS JPT TAF11L8_chr5_17585364_17595960 TAF11L8 chr5 17585364 17595960
NA18974 hp1 a0001 c0001 t0000 g0000 EAS JPT TAF11L8_chr5_17585364_17595960 TAF11L8 chr5 17585364 17595960
NA18974 hp2 a0002 c0003 t0000 g0000 EAS JPT TAF11L8_chr5_17585364_17595960 TAF11L8 chr5 17585364 17595960
NA18977 hp1 a0001 c0001 t0000 g0000 EAS JPT TAF11L8_chr5_17585364_17595960 TAF11L8 chr5 17585364 17595960
NA18977 hp2 a0001 c0001 t0000 g0000 EAS JPT TAF11L8_chr5_17585364_17595960 TAF11L8 chr5 17585364 17595960
NA18978 hp1 a0001 c0001 t0000 g0000 EAS JPT TAF11L8_chr5_17585364_17595960 TAF11L8 chr5 17585364 17595960
NA18978 hp2 a0001 c0001 t0000 g0000 EAS JPT TAF11L8_chr5_17585364_17595960 TAF11L8 chr5 17585364 17595960
NA18982 hp1 a0001 c0001 t0000 g0000 EAS JPT TAF11L8_chr5_17585364_17595960 TAF11L8 chr5 17585364 17595960
NA18982 hp2 a0001 c0001 t0000 g0000 EAS JPT TAF11L8_chr5_17585364_17595960 TAF11L8 chr5 17585364 17595960
NA18989 hp1 a0001 c0001 t0000 g0000 EAS JPT TAF11L8_chr5_17585364_17595960 TAF11L8 chr5 17585364 17595960
NA18989 hp2 a0001 c0001 t0000 g0000 EAS JPT TAF11L8_chr5_17585364_17595960 TAF11L8 chr5 17585364 17595960
NA18998 hp1 a0001 c0001 t0000 g0000 EAS JPT TAF11L8_chr5_17585364_17595960 TAF11L8 chr5 17585364 17595960
NA18998 hp2 a0001 c0001 t0000 g0000 EAS JPT TAF11L8_chr5_17585364_17595960 TAF11L8 chr5 17585364 17595960
NA19001 hp1 a0002 c0003 t0000 g0000 EAS JPT TAF11L8_chr5_17585364_17595960 TAF11L8 chr5 17585364 17595960
NA19001 hp2 a0001 c0006 t0000 g0000 EAS JPT TAF11L8_chr5_17585364_17595960 TAF11L8 chr5 17585364 17595960
NA19004 hp1 a0001 c0001 t0000 g0000 EAS JPT TAF11L8_chr5_17585364_17595960 TAF11L8 chr5 17585364 17595960
NA19004 hp2 a0001 c0001 t0000 g0000 EAS JPT TAF11L8_chr5_17585364_17595960 TAF11L8 chr5 17585364 17595960
NA19043 hp1 a0006 c0005 t0000 g0000 AFR LWK TAF11L8_chr5_17585364_17595960 TAF11L8 chr5 17585364 17595960
NA19043 hp2 a0001 c0001 t0000 g0000 AFR LWK TAF11L8_chr5_17585364_17595960 TAF11L8 chr5 17585364 17595960
NA19057 hp1 a0001 c0001 t0000 g0000 EAS JPT TAF11L8_chr5_17585364_17595960 TAF11L8 chr5 17585364 17595960
NA19057 hp2 a0001 c0001 t0000 g0000 EAS JPT TAF11L8_chr5_17585364_17595960 TAF11L8 chr5 17585364 17595960
NA19063 hp1 a0001 c0001 t0000 g0000 EAS JPT TAF11L8_chr5_17585364_17595960 TAF11L8 chr5 17585364 17595960
NA19063 hp2 a0001 c0001 t0000 g0000 EAS JPT TAF11L8_chr5_17585364_17595960 TAF11L8 chr5 17585364 17595960
NA19064 hp1 a0001 c0001 t0000 g0000 EAS JPT TAF11L8_chr5_17585364_17595960 TAF11L8 chr5 17585364 17595960
NA19064 hp2 a0001 c0001 t0000 g0000 EAS JPT TAF11L8_chr5_17585364_17595960 TAF11L8 chr5 17585364 17595960
NA19066 hp1 a0001 c0001 t0000 g0000 EAS JPT TAF11L8_chr5_17585364_17595960 TAF11L8 chr5 17585364 17595960
NA19066 hp2 a0001 c0001 t0000 g0000 EAS JPT TAF11L8_chr5_17585364_17595960 TAF11L8 chr5 17585364 17595960
NA19074 hp1 a0001 c0001 t0000 g0000 EAS JPT TAF11L8_chr5_17585364_17595960 TAF11L8 chr5 17585364 17595960
NA19074 hp2 a0001 c0001 t0000 g0000 EAS JPT TAF11L8_chr5_17585364_17595960 TAF11L8 chr5 17585364 17595960
NA19081 hp1 a0001 c0001 t0000 g0000 EAS JPT TAF11L8_chr5_17585364_17595960 TAF11L8 chr5 17585364 17595960
NA19081 hp2 a0001 c0001 t0000 g0000 EAS JPT TAF11L8_chr5_17585364_17595960 TAF11L8 chr5 17585364 17595960
NA19083 hp1 a0001 c0001 t0000 g0000 EAS JPT TAF11L8_chr5_17585364_17595960 TAF11L8 chr5 17585364 17595960
NA19083 hp2 a0001 c0001 t0000 g0000 EAS JPT TAF11L8_chr5_17585364_17595960 TAF11L8 chr5 17585364 17595960
NA19086 hp1 a0001 c0001 t0000 g0000 EAS JPT TAF11L8_chr5_17585364_17595960 TAF11L8 chr5 17585364 17595960
NA19086 hp2 a0001 c0001 t0000 g0000 EAS JPT TAF11L8_chr5_17585364_17595960 TAF11L8 chr5 17585364 17595960
NA19087 hp1 a0001 c0001 t0000 g0000 EAS JPT TAF11L8_chr5_17585364_17595960 TAF11L8 chr5 17585364 17595960
NA19087 hp2 a0001 c0001 t0000 g0000 EAS JPT TAF11L8_chr5_17585364_17595960 TAF11L8 chr5 17585364 17595960
NA20129 hp1 a0001 c0001 t0000 g0000 AFR ASW TAF11L8_chr5_17585364_17595960 TAF11L8 chr5 17585364 17595960
NA20129 hp2 a0001 c0001 t0000 g0000 AFR ASW TAF11L8_chr5_17585364_17595960 TAF11L8 chr5 17585364 17595960

chr:pos ref alt #
# of ahapid:amino-acid(protein) level
 ahapids #
# of haplotypeids
 haplotypeids annotation impact hgvs_c hgvs_p genename geneid featuretype featureid transcript_biotype rank cdna
cdna pos length
 cds
cds pos length
 aa
aa pos length
 distance status chr pos
chr5:17590548
G
G
 A
A
 1 a0005
a0005
 1 HG03579.hp1
HG03579.hp1
 missense_variant MODERATE c.413C>T
c.413C>T
 p.Ala138Val
p.Ala138Val
 TAF11L8 ENSG00000283967.1 transcript ENST00000640803.1 protein_coding 1/1 413/597 413/597 138/198 chr5 17590548
chr5:17590685
C
C
 G
G
 1 a0004
a0004
 1 HG02622.hp1
HG02622.hp1
 missense_variant MODERATE c.276G>C
c.276G>C
 p.Gln92His
p.Gln92His
 TAF11L8 ENSG00000283967.1 transcript ENST00000640803.1 protein_coding 1/1 276/597 276/597 92/198 chr5 17590685
chr5:17590732
T
T
 C
C
 1 a0003
a0003
 1 HG00438.hp2
HG00438.hp2
 missense_variant MODERATE c.229A>G
c.229A>G
 p.Lys77Glu
p.Lys77Glu
 TAF11L8 ENSG00000283967.1 transcript ENST00000640803.1 protein_coding 1/1 229/597 229/597 77/198 chr5 17590732
chr5:17590861
C
C
 T
T
 1 a0006
a0006
 1 NA19043.hp1
NA19043.hp1
 missense_variant MODERATE c.100G>A
c.100G>A
 p.Gly34Arg
p.Gly34Arg
 TAF11L8 ENSG00000283967.1 transcript ENST00000640803.1 protein_coding 1/1 100/597 100/597 34/198 chr5 17590861
chr5:17590864
C
C
 T
T
 1 a0007
a0007
 1 HG02523.hp1
HG02523.hp1
 missense_variant MODERATE c.97G>A
c.97G>A
 p.Asp33Asn
p.Asp33Asn
 TAF11L8 ENSG00000283967.1 transcript ENST00000640803.1 protein_coding 1/1 97/597 97/597 33/198 chr5 17590864
chr5:17590912
G
G
 A
A
 1 a0002
a0002
 3 HG00738.hp2
NA18974.hp2
NA19001.hp1
HG00738.hp2
NA18974.hp2
NA19001.hp1
 missense_variant MODERATE c.49C>T
c.49C>T
 p.Pro17Ser
p.Pro17Ser
 TAF11L8 ENSG00000283967.1 transcript ENST00000640803.1 protein_coding 1/1 49/597 49/597 17/198 chr5 17590912

chr:pos ref alt #
# of chapid
 chapids #
# of haplotypeids
 haplotypeids annotation impact hgvs_c hgvs_p genename geneid featuretype featureid transcript_biotype rank cdna
cdna pos length
 cds
cds pos length
 aa
aa pos length
 distance status chr pos
chr5:17590490
T
T
 G
G
 9 a0001c0001
a0001c0006
a0001c0009
others(6): Show 
a0001c0001
a0001c0006
a0001c0009
a0002c0003
a0003c0010
a0004c0007
a0005c0008
a0006c0005
a0007c0004
 99 HG00408.hp1
HG00408.hp2
HG00438.hp1
others(96): Show 
HG00408.hp1
HG00408.hp2
HG00438.hp1
HG00438.hp2
HG00558.hp1
HG00558.hp2
HG00621.hp1
HG00621.hp2
HG00735.hp1
HG00735.hp2
HG00738.hp1
HG00738.hp2
HG01071.hp1
HG01071.hp2
HG01074.hp1
HG01074.hp2
HG01109.hp1
HG01109.hp2
HG01192.hp1
HG01192.hp2
HG01978.hp1
HG01978.hp2
HG01981.hp1
HG01981.hp2
HG02040.hp1
HG02040.hp2
HG02056.hp1
HG02056.hp2
HG02080.hp1
HG02080.hp2
HG02132.hp1
HG02132.hp2
HG02280.hp1
HG02523.hp1
HG02523.hp2
HG02622.hp1
HG02622.hp2
HG02630.hp1
HG02630.hp2
HG02647.hp1
HG02897.hp1
HG02897.hp2
HG02965.hp2
HG03017.hp1
HG03017.hp2
HG03492.hp1
HG03492.hp2
HG03579.hp1
HG03579.hp2
HG04228.hp1
HG04228.hp2
NA18747.hp1
NA18747.hp2
NA18942.hp1
NA18942.hp2
NA18948.hp1
NA18948.hp2
NA18954.hp1
NA18954.hp2
NA18959.hp1
NA18959.hp2
NA18974.hp1
NA18974.hp2
NA18977.hp1
NA18977.hp2
NA18978.hp1
NA18978.hp2
NA18982.hp1
NA18982.hp2
NA18989.hp1
NA18989.hp2
NA18998.hp1
NA18998.hp2
NA19001.hp1
NA19001.hp2
NA19004.hp1
NA19004.hp2
NA19043.hp1
NA19043.hp2
NA19057.hp1
NA19057.hp2
NA19063.hp1
NA19063.hp2
NA19064.hp1
NA19064.hp2
NA19066.hp1
NA19066.hp2
NA19074.hp1
NA19074.hp2
NA19081.hp1
NA19081.hp2
NA19083.hp1
NA19083.hp2
NA19086.hp1
NA19086.hp2
NA19087.hp1
NA19087.hp2
NA20129.hp1
NA20129.hp2
 synonymous_variant LOW c.471A>C
c.471A>C
 p.Ala157Ala
p.Ala157Ala
 TAF11L8 ENSG00000283967.1 transcript ENST00000640803.1 protein_coding 1/1 471/597 471/597 157/198 chr5 17590490
chr5:17590556
C
C
 A
A
 1 a0001c0009
a0001c0009
 1 HG01192.hp2
HG01192.hp2
 synonymous_variant LOW c.405G>T
c.405G>T
 p.Ser135Ser
p.Ser135Ser
 TAF11L8 ENSG00000283967.1 transcript ENST00000640803.1 protein_coding 1/1 405/597 405/597 135/198 chr5 17590556
chr5:17590691
T
T
 C
C
 10 a0001c0001
a0001c0002
a0001c0006
others(7): Show 
a0001c0001
a0001c0002
a0001c0006
a0001c0009
a0002c0003
a0003c0010
a0004c0007
a0005c0008
a0006c0005
a0007c0004
 102 HG00408.hp1
HG00408.hp2
HG00438.hp1
others(99): Show 
HG00408.hp1
HG00408.hp2
HG00438.hp1
HG00438.hp2
HG00558.hp1
HG00558.hp2
HG00621.hp1
HG00621.hp2
HG00735.hp1
HG00735.hp2
HG00738.hp1
HG00738.hp2
HG01071.hp1
HG01071.hp2
HG01074.hp1
HG01074.hp2
HG01109.hp1
HG01109.hp2
HG01192.hp1
HG01192.hp2
HG01978.hp1
HG01978.hp2
HG01981.hp1
HG01981.hp2
HG02040.hp1
HG02040.hp2
HG02056.hp1
HG02056.hp2
HG02080.hp1
HG02080.hp2
HG02132.hp1
HG02132.hp2
HG02280.hp1
HG02280.hp2
HG02523.hp1
HG02523.hp2
HG02622.hp1
HG02622.hp2
HG02630.hp1
HG02630.hp2
HG02647.hp1
HG02647.hp2
HG02897.hp1
HG02897.hp2
HG02965.hp1
HG02965.hp2
HG03017.hp1
HG03017.hp2
HG03492.hp1
HG03492.hp2
HG03579.hp1
HG03579.hp2
HG04228.hp1
HG04228.hp2
NA18747.hp1
NA18747.hp2
NA18942.hp1
NA18942.hp2
NA18948.hp1
NA18948.hp2
NA18954.hp1
NA18954.hp2
NA18959.hp1
NA18959.hp2
NA18974.hp1
NA18974.hp2
NA18977.hp1
NA18977.hp2
NA18978.hp1
NA18978.hp2
NA18982.hp1
NA18982.hp2
NA18989.hp1
NA18989.hp2
NA18998.hp1
NA18998.hp2
NA19001.hp1
NA19001.hp2
NA19004.hp1
NA19004.hp2
NA19043.hp1
NA19043.hp2
NA19057.hp1
NA19057.hp2
NA19063.hp1
NA19063.hp2
NA19064.hp1
NA19064.hp2
NA19066.hp1
NA19066.hp2
NA19074.hp1
NA19074.hp2
NA19081.hp1
NA19081.hp2
NA19083.hp1
NA19083.hp2
NA19086.hp1
NA19086.hp2
NA19087.hp1
NA19087.hp2
NA20129.hp1
NA20129.hp2
 synonymous_variant LOW c.270A>G
c.270A>G
 p.Glu90Glu
p.Glu90Glu
 TAF11L8 ENSG00000283967.1 transcript ENST00000640803.1 protein_coding 1/1 270/597 270/597 90/198 chr5 17590691
chr5:17590766
A
A
 G
G
 1 a0001c0006
a0001c0006
 1 NA19001.hp2
NA19001.hp2
 synonymous_variant LOW c.195T>C
c.195T>C
 p.Ala65Ala
p.Ala65Ala
 TAF11L8 ENSG00000283967.1 transcript ENST00000640803.1 protein_coding 1/1 195/597 195/597 65/198 chr5 17590766
chr5:17590937
G
G
 A
A
 9 a0001c0001
a0001c0006
a0001c0009
others(6): Show 
a0001c0001
a0001c0006
a0001c0009
a0002c0003
a0003c0010
a0004c0007
a0005c0008
a0006c0005
a0007c0004
 99 HG00408.hp1
HG00408.hp2
HG00438.hp1
others(96): Show 
HG00408.hp1
HG00408.hp2
HG00438.hp1
HG00438.hp2
HG00558.hp1
HG00558.hp2
HG00621.hp1
HG00621.hp2
HG00735.hp1
HG00735.hp2
HG00738.hp1
HG00738.hp2
HG01071.hp1
HG01071.hp2
HG01074.hp1
HG01074.hp2
HG01109.hp1
HG01109.hp2
HG01192.hp1
HG01192.hp2
HG01978.hp1
HG01978.hp2
HG01981.hp1
HG01981.hp2
HG02040.hp1
HG02040.hp2
HG02056.hp1
HG02056.hp2
HG02080.hp1
HG02080.hp2
HG02132.hp1
HG02132.hp2
HG02280.hp1
HG02523.hp1
HG02523.hp2
HG02622.hp1
HG02622.hp2
HG02630.hp1
HG02630.hp2
HG02647.hp1
HG02897.hp1
HG02897.hp2
HG02965.hp2
HG03017.hp1
HG03017.hp2
HG03492.hp1
HG03492.hp2
HG03579.hp1
HG03579.hp2
HG04228.hp1
HG04228.hp2
NA18747.hp1
NA18747.hp2
NA18942.hp1
NA18942.hp2
NA18948.hp1
NA18948.hp2
NA18954.hp1
NA18954.hp2
NA18959.hp1
NA18959.hp2
NA18974.hp1
NA18974.hp2
NA18977.hp1
NA18977.hp2
NA18978.hp1
NA18978.hp2
NA18982.hp1
NA18982.hp2
NA18989.hp1
NA18989.hp2
NA18998.hp1
NA18998.hp2
NA19001.hp1
NA19001.hp2
NA19004.hp1
NA19004.hp2
NA19043.hp1
NA19043.hp2
NA19057.hp1
NA19057.hp2
NA19063.hp1
NA19063.hp2
NA19064.hp1
NA19064.hp2
NA19066.hp1
NA19066.hp2
NA19074.hp1
NA19074.hp2
NA19081.hp1
NA19081.hp2
NA19083.hp1
NA19083.hp2
NA19086.hp1
NA19086.hp2
NA19087.hp1
NA19087.hp2
NA20129.hp1
NA20129.hp2
 synonymous_variant LOW c.24C>T
c.24C>T
 p.Gly8Gly
p.Gly8Gly
 TAF11L8 ENSG00000283967.1 transcript ENST00000640803.1 protein_coding 1/1 24/597 24/597 8/198 chr5 17590937

chr:pos ref alt #
# of thapid:transcript level
 thapids #
# of haplotypeids
 haplotypeids annotation impact hgvs_c hgvs_p genename geneid featuretype featureid transcript_biotype rank cdna
cdna pos length
 cds
cds pos length
 aa
aa pos length
 distance status chr pos

chr:pos ref alt #
# of ghapid:genebody level
 ghapids #
# of haplotypeids
 haplotypeids annotation impact hgvs_c hgvs_p genename geneid featuretype featureid genebody_biotype rank cdna
cdna pos length
 cds
cds pos length
 aa
aa pos length
 distance status chr pos

  • GeneCards
  • OpenTarget
  • The Human Protein Atlas
  • Gnomad v4.1.0
  • PhewebJP (Japan)
  • UKB-TOPMed (UMich) (UK and US)
  • FinnGen r11 (Finland)
  • KoGES (Korean)
  • Mouse Phenotype
  • Zebra Phenotype
  • TogoVar

  • DNA
  • Satellite
  • All Snps 1.4.2
  • RC
  • snRNA
  • SINE
  • GC %
  • Simple_repeat
  • RNA
  • Retroposon
  • Unknown
  • Low_complexity
  • LINE
  • scRNA
  • CpG Islands
  • Phastcons (20 way)
  • srpRNA
  • Common Snps 1.4.2
  • rRNA
  • LTR
  • tRNA

  • Axiom Genome-Wide Array (Japonica Array V1)
  • Axiom Genome-Wide Array (Japonica Array V2)
  • Axiom Genome-Wide ASI Array V1 (ASI V1)
​

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