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geneid	79065
ensemblid	ENSG00000198925.12
hgncid	22408
symbol	ATG9A
name	autophagy related 9A
refseq_nuc	NM_001077198.3
refseq_prot	NP_001070666.1
ensembl_nuc	ENST00000361242.9
ensembl_prot	ENSP00000355173.4
mane_status	MANE Select
chr	chr2
start	219219380
end	219229636
strand	-
ver	v1.2
region	chr2:219219380-219229636
region5000	chr2:219214380-219234636
regionname0	ATG9A_chr2_219219380_219229636
regionname5000	ATG9A_chr2_219214380_219234636

ahapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	alen	total	AFR	AMR	EAS	EUR	SAS	JPT	regionname	genename	aa	chr	start	end
a0001	1/1	839	311	77	68	120	16	28	89	ATG9A_chr2_219214380_219234636	ATG9A	copy fasta	chr2	219214380	219234636
a0002	0/0	839	26	4	8	8	0	6	6	ATG9A_chr2_219214380_219234636	ATG9A	copy fasta	chr2	219214380	219234636
a0003	0/0	839	2	0	0	2	0	0	2	ATG9A_chr2_219214380_219234636	ATG9A	copy fasta	chr2	219214380	219234636
a0004	0/0	839	2	2	0	0	0	0	0	ATG9A_chr2_219214380_219234636	ATG9A	copy fasta	chr2	219214380	219234636
a0005	0/0	839	2	2	0	0	0	0	0	ATG9A_chr2_219214380_219234636	ATG9A	copy fasta	chr2	219214380	219234636
a0006	0/0	839	2	0	2	0	0	0	0	ATG9A_chr2_219214380_219234636	ATG9A	copy fasta	chr2	219214380	219234636
a0007	0/0	839	1	0	0	1	0	0	1	ATG9A_chr2_219214380_219234636	ATG9A	copy fasta	chr2	219214380	219234636
a0008	0/0	839	1	1	0	0	0	0	0	ATG9A_chr2_219214380_219234636	ATG9A	copy fasta	chr2	219214380	219234636
a0009	0/0	839	1	0	0	1	0	0	0	ATG9A_chr2_219214380_219234636	ATG9A	copy fasta	chr2	219214380	219234636

chapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	clen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	cseq	chr	start	end
c0001	0/1	2520	234	40	66	86	16	25	ATG9A_chr2_219214380_219234636	ATG9A	copy fasta	chr2	219214380	219234636
c0002	1/0	2520	57	30	2	23	0	1	ATG9A_chr2_219214380_219234636	ATG9A	copy fasta	chr2	219214380	219234636
c0003	0/0	2520	25	4	8	8	0	5	ATG9A_chr2_219214380_219234636	ATG9A	copy fasta	chr2	219214380	219234636
c0004	0/0	2520	11	0	0	11	0	0	ATG9A_chr2_219214380_219234636	ATG9A	copy fasta	chr2	219214380	219234636
c0005	0/0	2520	5	5	0	0	0	0	ATG9A_chr2_219214380_219234636	ATG9A	copy fasta	chr2	219214380	219234636
c0006	0/0	2520	2	2	0	0	0	0	ATG9A_chr2_219214380_219234636	ATG9A	copy fasta	chr2	219214380	219234636
c0007	0/0	2520	2	2	0	0	0	0	ATG9A_chr2_219214380_219234636	ATG9A	copy fasta	chr2	219214380	219234636
c0008	0/0	2520	2	0	0	2	0	0	ATG9A_chr2_219214380_219234636	ATG9A	copy fasta	chr2	219214380	219234636
c0009	0/0	2520	2	0	2	0	0	0	ATG9A_chr2_219214380_219234636	ATG9A	copy fasta	chr2	219214380	219234636
c0010	0/0	2520	1	0	0	0	0	1	ATG9A_chr2_219214380_219234636	ATG9A	copy fasta	chr2	219214380	219234636
c0011	0/0	2520	1	0	0	1	0	0	ATG9A_chr2_219214380_219234636	ATG9A	copy fasta	chr2	219214380	219234636
c0012	0/0	2520	1	0	0	1	0	0	ATG9A_chr2_219214380_219234636	ATG9A	copy fasta	chr2	219214380	219234636
c0013	0/0	2520	1	0	0	0	0	1	ATG9A_chr2_219214380_219234636	ATG9A	copy fasta	chr2	219214380	219234636
c0014	0/0	2520	1	1	0	0	0	0	ATG9A_chr2_219214380_219234636	ATG9A	copy fasta	chr2	219214380	219234636
c0015	0/0	2520	1	1	0	0	0	0	ATG9A_chr2_219214380_219234636	ATG9A	copy fasta	chr2	219214380	219234636
c0016	0/0	2520	1	1	0	0	0	0	ATG9A_chr2_219214380_219234636	ATG9A	copy fasta	chr2	219214380	219234636
c0017	0/0	2520	1	0	0	0	0	1	ATG9A_chr2_219214380_219234636	ATG9A	copy fasta	chr2	219214380	219234636

thapid	grch38 chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	tlen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	tseq	chr	start	end
t0001	0/1	1251	192	27	37	92	12	23	ATG9A_chr2_219214380_219234636	ATG9A	copy fasta	chr2	219214380	219234636
t0002	0/0	1251	40	16	10	8	0	6	ATG9A_chr2_219214380_219234636	ATG9A	copy fasta	chr2	219214380	219234636
t0003	0/0	1251	24	0	0	23	0	1	ATG9A_chr2_219214380_219234636	ATG9A	copy fasta	chr2	219214380	219234636
t0004	0/0	1251	19	0	13	0	4	2	ATG9A_chr2_219214380_219234636	ATG9A	copy fasta	chr2	219214380	219234636
t0005	0/0	1251	17	16	1	0	0	0	ATG9A_chr2_219214380_219234636	ATG9A	copy fasta	chr2	219214380	219234636
t0006	0/0	1251	12	0	12	0	0	0	ATG9A_chr2_219214380_219234636	ATG9A	copy fasta	chr2	219214380	219234636
t0007	0/0	1251	11	11	0	0	0	0	ATG9A_chr2_219214380_219234636	ATG9A	copy fasta	chr2	219214380	219234636
t0008	1/0	1251	9	7	1	0	0	0	ATG9A_chr2_219214380_219234636	ATG9A	copy fasta	chr2	219214380	219234636
t0009	0/0	1251	6	6	0	0	0	0	ATG9A_chr2_219214380_219234636	ATG9A	copy fasta	chr2	219214380	219234636
t0010	0/0	1251	4	0	1	3	0	0	ATG9A_chr2_219214380_219234636	ATG9A	copy fasta	chr2	219214380	219234636
t0011	0/0	1251	2	0	0	2	0	0	ATG9A_chr2_219214380_219234636	ATG9A	copy fasta	chr2	219214380	219234636
t0012	0/0	1251	2	0	2	0	0	0	ATG9A_chr2_219214380_219234636	ATG9A	copy fasta	chr2	219214380	219234636
t0013	0/0	1251	2	0	0	2	0	0	ATG9A_chr2_219214380_219234636	ATG9A	copy fasta	chr2	219214380	219234636
t0014	0/0	1251	2	2	0	0	0	0	ATG9A_chr2_219214380_219234636	ATG9A	copy fasta	chr2	219214380	219234636
t0015	0/0	1251	1	0	0	1	0	0	ATG9A_chr2_219214380_219234636	ATG9A	copy fasta	chr2	219214380	219234636
t0016	0/0	1251	1	0	0	1	0	0	ATG9A_chr2_219214380_219234636	ATG9A	copy fasta	chr2	219214380	219234636
t0017	0/0	1251	1	0	0	0	0	1	ATG9A_chr2_219214380_219234636	ATG9A	copy fasta	chr2	219214380	219234636
t0018	0/0	1251	1	0	1	0	0	0	ATG9A_chr2_219214380_219234636	ATG9A	copy fasta	chr2	219214380	219234636
t0019	0/0	1251	1	0	0	0	0	1	ATG9A_chr2_219214380_219234636	ATG9A	copy fasta	chr2	219214380	219234636
t0020	0/0	1251	1	1	0	0	0	0	ATG9A_chr2_219214380_219234636	ATG9A	copy fasta	chr2	219214380	219234636

ghapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	chr	start	end
g0001	0/1	126	15	26	56	10	18	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
g0002	0/0	22	0	0	21	0	1	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
g0003	0/0	18	1	8	8	0	1	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
g0004	0/0	16	0	10	0	4	2	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
g0005	0/0	12	0	12	0	0	0	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
g0006	0/0	10	10	0	0	0	0	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
g0007	0/0	9	0	0	9	0	0	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
g0008	1/0	8	6	1	0	0	0	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
g0009	0/0	8	0	2	6	0	0	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
g0010	0/0	5	5	0	0	0	0	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
g0011	0/0	5	4	1	0	0	0	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
g0012	0/0	5	2	0	3	0	0	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
g0013	0/0	5	5	0	0	0	0	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
g0014	0/0	4	0	1	3	0	0	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
g0015	0/0	4	0	0	4	0	0	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
g0016	0/0	4	1	3	0	0	0	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
g0017	0/0	4	4	0	0	0	0	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
g0018	0/0	3	3	0	0	0	0	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
g0019	0/0	3	0	2	0	0	1	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
g0020	0/0	3	3	0	0	0	0	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
g0021	0/0	2	0	0	2	0	0	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
g0022	0/0	2	2	0	0	0	0	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
g0023	0/0	2	2	0	0	0	0	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
g0024	0/0	2	2	0	0	0	0	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
g0025	0/0	2	2	0	0	0	0	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
g0026	0/0	2	2	0	0	0	0	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
g0027	0/0	2	2	0	0	0	0	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
g0028	0/0	2	0	0	2	0	0	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
g0029	0/0	2	0	0	2	0	0	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
g0030	0/0	2	0	0	2	0	0	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
g0031	0/0	2	2	0	0	0	0	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
g0032	0/0	2	0	0	2	0	0	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
g0033	0/0	2	0	2	0	0	0	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
g0034	0/0	2	0	0	0	0	2	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
g0035	0/0	2	0	0	0	0	2	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
g0036	0/0	2	0	2	0	0	0	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
g0037	0/0	1	0	0	1	0	0	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
g0038	0/0	1	1	0	0	0	0	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
g0039	0/0	1	0	0	1	0	0	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
g0040	0/0	1	0	0	1	0	0	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
g0041	0/0	1	1	0	0	0	0	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
g0042	0/0	1	1	0	0	0	0	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
g0043	0/0	1	1	0	0	0	0	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
g0044	0/0	1	1	0	0	0	0	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
g0045	0/0	1	1	0	0	0	0	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
g0046	0/0	1	0	0	0	1	0	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
g0047	0/0	1	0	0	0	1	0	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
g0048	0/0	1	0	0	1	0	0	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
g0049	0/0	1	0	0	0	0	1	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
g0050	0/0	1	0	0	1	0	0	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
g0051	0/0	1	0	0	1	0	0	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
g0052	0/0	1	0	0	1	0	0	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
g0053	0/0	1	0	0	1	0	0	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
g0054	0/0	1	0	1	0	0	0	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
g0055	0/0	1	0	0	0	0	1	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
g0056	0/0	1	0	1	0	0	0	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
g0057	0/0	1	1	0	0	0	0	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
g0058	0/0	1	0	1	0	0	0	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
g0059	0/0	1	0	0	0	0	1	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
g0060	0/0	1	0	0	1	0	0	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
g0061	0/0	1	0	0	0	0	1	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
g0062	0/0	1	0	1	0	0	0	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
g0063	0/0	1	1	0	0	0	0	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
g0064	0/0	1	0	1	0	0	0	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
g0065	0/0	1	0	0	1	0	0	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
g0066	0/0	1	1	0	0	0	0	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
g0067	0/0	1	0	0	1	0	0	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
g0068	0/0	1	0	0	0	0	1	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
g0069	0/0	1	0	1	0	0	0	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
g0070	0/0	1	0	0	0	0	1	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
g0071	0/0	1	0	1	0	0	0	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
g0072	0/0	1	0	0	1	0	0	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
g0073	0/0	1	0	1	0	0	0	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
g0074	0/0	1	1	0	0	0	0	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
g0075	0/0	1	1	0	0	0	0	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
g0076	0/0	1	0	0	0	0	1	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
g0077	0/0	1	1	0	0	0	0	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
g0078	0/0	1	1	0	0	0	0	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636

achapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	clen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	cseq	chr	start	end
a0001c0001	0/1	2520	234	40	66	86	16	25	ATG9A_chr2_219214380_219234636	ATG9A	copy fasta	chr2	219214380	219234636
a0001c0002	1/0	2520	57	30	2	23	0	1	ATG9A_chr2_219214380_219234636	ATG9A	copy fasta	chr2	219214380	219234636
a0001c0004	0/0	2520	11	0	0	11	0	0	ATG9A_chr2_219214380_219234636	ATG9A	copy fasta	chr2	219214380	219234636
a0001c0005	0/0	2520	5	5	0	0	0	0	ATG9A_chr2_219214380_219234636	ATG9A	copy fasta	chr2	219214380	219234636
a0001c0010	0/0	2520	1	0	0	0	0	1	ATG9A_chr2_219214380_219234636	ATG9A	copy fasta	chr2	219214380	219234636
a0001c0013	0/0	2520	1	0	0	0	0	1	ATG9A_chr2_219214380_219234636	ATG9A	copy fasta	chr2	219214380	219234636
a0001c0015	0/0	2520	1	1	0	0	0	0	ATG9A_chr2_219214380_219234636	ATG9A	copy fasta	chr2	219214380	219234636
a0001c0016	0/0	2520	1	1	0	0	0	0	ATG9A_chr2_219214380_219234636	ATG9A	copy fasta	chr2	219214380	219234636
a0002c0003	0/0	2520	25	4	8	8	0	5	ATG9A_chr2_219214380_219234636	ATG9A	copy fasta	chr2	219214380	219234636
a0002c0017	0/0	2520	1	0	0	0	0	1	ATG9A_chr2_219214380_219234636	ATG9A	copy fasta	chr2	219214380	219234636
a0003c0008	0/0	2520	2	0	0	2	0	0	ATG9A_chr2_219214380_219234636	ATG9A	copy fasta	chr2	219214380	219234636
a0004c0007	0/0	2520	2	2	0	0	0	0	ATG9A_chr2_219214380_219234636	ATG9A	copy fasta	chr2	219214380	219234636
a0005c0006	0/0	2520	2	2	0	0	0	0	ATG9A_chr2_219214380_219234636	ATG9A	copy fasta	chr2	219214380	219234636
a0006c0009	0/0	2520	2	0	2	0	0	0	ATG9A_chr2_219214380_219234636	ATG9A	copy fasta	chr2	219214380	219234636
a0007c0011	0/0	2520	1	0	0	1	0	0	ATG9A_chr2_219214380_219234636	ATG9A	copy fasta	chr2	219214380	219234636
a0008c0014	0/0	2520	1	1	0	0	0	0	ATG9A_chr2_219214380_219234636	ATG9A	copy fasta	chr2	219214380	219234636
a0009c0012	0/0	2520	1	0	0	1	0	0	ATG9A_chr2_219214380_219234636	ATG9A	copy fasta	chr2	219214380	219234636

acthapid	grch38 chm13v2	tlen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	tseq	chr	start	end
a0001c0001t0001	0/1	3770	174	26	37	77	12	21	ATG9A_chr2_219214380_219234636	ATG9A	copy fasta	chr2	219214380	219234636
a0001c0001t0002	0/0	3770	12	12	0	0	0	0	ATG9A_chr2_219214380_219234636	ATG9A	copy fasta	chr2	219214380	219234636
a0001c0001t0004	0/0	3770	19	0	13	0	4	2	ATG9A_chr2_219214380_219234636	ATG9A	copy fasta	chr2	219214380	219234636
a0001c0001t0006	0/0	3770	12	0	12	0	0	0	ATG9A_chr2_219214380_219234636	ATG9A	copy fasta	chr2	219214380	219234636
a0001c0001t0010	0/0	3770	4	0	1	3	0	0	ATG9A_chr2_219214380_219234636	ATG9A	copy fasta	chr2	219214380	219234636
a0001c0001t0011	0/0	3770	2	0	0	2	0	0	ATG9A_chr2_219214380_219234636	ATG9A	copy fasta	chr2	219214380	219234636
a0001c0001t0012	0/0	3770	2	0	2	0	0	0	ATG9A_chr2_219214380_219234636	ATG9A	copy fasta	chr2	219214380	219234636
a0001c0001t0013	0/0	3770	2	0	0	2	0	0	ATG9A_chr2_219214380_219234636	ATG9A	copy fasta	chr2	219214380	219234636
a0001c0001t0014	0/0	3770	2	2	0	0	0	0	ATG9A_chr2_219214380_219234636	ATG9A	copy fasta	chr2	219214380	219234636
a0001c0001t0015	0/0	3770	1	0	0	1	0	0	ATG9A_chr2_219214380_219234636	ATG9A	copy fasta	chr2	219214380	219234636
a0001c0001t0016	0/0	3770	1	0	0	1	0	0	ATG9A_chr2_219214380_219234636	ATG9A	copy fasta	chr2	219214380	219234636
a0001c0001t0017	0/0	3770	1	0	0	0	0	1	ATG9A_chr2_219214380_219234636	ATG9A	copy fasta	chr2	219214380	219234636
a0001c0001t0018	0/0	3770	1	0	1	0	0	0	ATG9A_chr2_219214380_219234636	ATG9A	copy fasta	chr2	219214380	219234636
a0001c0001t0019	0/0	3770	1	0	0	0	0	1	ATG9A_chr2_219214380_219234636	ATG9A	copy fasta	chr2	219214380	219234636
a0001c0002t0003	0/0	3770	24	0	0	23	0	1	ATG9A_chr2_219214380_219234636	ATG9A	copy fasta	chr2	219214380	219234636
a0001c0002t0005	0/0	3770	8	7	1	0	0	0	ATG9A_chr2_219214380_219234636	ATG9A	copy fasta	chr2	219214380	219234636
a0001c0002t0007	0/0	3770	11	11	0	0	0	0	ATG9A_chr2_219214380_219234636	ATG9A	copy fasta	chr2	219214380	219234636
a0001c0002t0008	1/0	3770	9	7	1	0	0	0	ATG9A_chr2_219214380_219234636	ATG9A	copy fasta	chr2	219214380	219234636
a0001c0002t0009	0/0	3770	5	5	0	0	0	0	ATG9A_chr2_219214380_219234636	ATG9A	copy fasta	chr2	219214380	219234636
a0001c0004t0001	0/0	3770	11	0	0	11	0	0	ATG9A_chr2_219214380_219234636	ATG9A	copy fasta	chr2	219214380	219234636
a0001c0005t0005	0/0	3770	5	5	0	0	0	0	ATG9A_chr2_219214380_219234636	ATG9A	copy fasta	chr2	219214380	219234636
a0001c0010t0001	0/0	3770	1	0	0	0	0	1	ATG9A_chr2_219214380_219234636	ATG9A	copy fasta	chr2	219214380	219234636
a0001c0013t0001	0/0	3770	1	0	0	0	0	1	ATG9A_chr2_219214380_219234636	ATG9A	copy fasta	chr2	219214380	219234636
a0001c0015t0001	0/0	3770	1	1	0	0	0	0	ATG9A_chr2_219214380_219234636	ATG9A	copy fasta	chr2	219214380	219234636
a0001c0016t0020	0/0	3770	1	1	0	0	0	0	ATG9A_chr2_219214380_219234636	ATG9A	copy fasta	chr2	219214380	219234636
a0002c0003t0002	0/0	3770	25	4	8	8	0	5	ATG9A_chr2_219214380_219234636	ATG9A	copy fasta	chr2	219214380	219234636
a0002c0017t0002	0/0	3770	1	0	0	0	0	1	ATG9A_chr2_219214380_219234636	ATG9A	copy fasta	chr2	219214380	219234636
a0003c0008t0001	0/0	3770	2	0	0	2	0	0	ATG9A_chr2_219214380_219234636	ATG9A	copy fasta	chr2	219214380	219234636
a0004c0007t0005	0/0	3770	2	2	0	0	0	0	ATG9A_chr2_219214380_219234636	ATG9A	copy fasta	chr2	219214380	219234636
a0005c0006t0005	0/0	3770	2	2	0	0	0	0	ATG9A_chr2_219214380_219234636	ATG9A	copy fasta	chr2	219214380	219234636
a0006c0009t0002	0/0	3770	2	0	2	0	0	0	ATG9A_chr2_219214380_219234636	ATG9A	copy fasta	chr2	219214380	219234636
a0007c0011t0001	0/0	3770	1	0	0	1	0	0	ATG9A_chr2_219214380_219234636	ATG9A	copy fasta	chr2	219214380	219234636
a0008c0014t0009	0/0	3770	1	1	0	0	0	0	ATG9A_chr2_219214380_219234636	ATG9A	copy fasta	chr2	219214380	219234636
a0009c0012t0001	0/0	3770	1	0	0	1	0	0	ATG9A_chr2_219214380_219234636	ATG9A	copy fasta	chr2	219214380	219234636

actghapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	chr	start	end
a0001c0001t0001g0001	0/1	126	15	26	56	10	18	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
a0001c0001t0001g0009	0/0	8	0	2	6	0	0	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
a0001c0001t0001g0012	0/0	5	2	0	3	0	0	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
a0001c0001t0001g0015	0/0	4	0	0	4	0	0	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
a0001c0001t0001g0016	0/0	4	1	3	0	0	0	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
a0001c0001t0001g0019	0/0	3	0	2	0	0	1	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
a0001c0001t0001g0024	0/0	2	2	0	0	0	0	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
a0001c0001t0001g0028	0/0	2	0	0	2	0	0	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
a0001c0001t0001g0031	0/0	2	2	0	0	0	0	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
a0001c0001t0001g0032	0/0	2	0	0	2	0	0	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
a0001c0001t0001g0038	0/0	1	1	0	0	0	0	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
a0001c0001t0001g0039	0/0	1	0	0	1	0	0	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
a0001c0001t0001g0043	0/0	1	1	0	0	0	0	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
a0001c0001t0001g0046	0/0	1	0	0	0	1	0	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
a0001c0001t0001g0047	0/0	1	0	0	0	1	0	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
a0001c0001t0001g0048	0/0	1	0	0	1	0	0	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
a0001c0001t0001g0049	0/0	1	0	0	0	0	1	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
a0001c0001t0001g0050	0/0	1	0	0	1	0	0	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
a0001c0001t0001g0057	0/0	1	1	0	0	0	0	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
a0001c0001t0001g0058	0/0	1	0	1	0	0	0	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
a0001c0001t0001g0066	0/0	1	1	0	0	0	0	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
a0001c0001t0001g0067	0/0	1	0	0	1	0	0	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
a0001c0001t0001g0068	0/0	1	0	0	0	0	1	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
a0001c0001t0001g0069	0/0	1	0	1	0	0	0	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
a0001c0001t0001g0071	0/0	1	0	1	0	0	0	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
a0001c0001t0001g0073	0/0	1	0	1	0	0	0	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
a0001c0001t0002g0013	0/0	5	5	0	0	0	0	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
a0001c0001t0002g0017	0/0	4	4	0	0	0	0	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
a0001c0001t0002g0075	0/0	1	1	0	0	0	0	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
a0001c0001t0002g0077	0/0	1	1	0	0	0	0	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
a0001c0001t0002g0078	0/0	1	1	0	0	0	0	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
a0001c0001t0004g0004	0/0	16	0	10	0	4	2	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
a0001c0001t0004g0054	0/0	1	0	1	0	0	0	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
a0001c0001t0004g0062	0/0	1	0	1	0	0	0	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
a0001c0001t0004g0064	0/0	1	0	1	0	0	0	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
a0001c0001t0006g0005	0/0	12	0	12	0	0	0	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
a0001c0001t0010g0014	0/0	4	0	1	3	0	0	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
a0001c0001t0011g0029	0/0	2	0	0	2	0	0	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
a0001c0001t0012g0033	0/0	2	0	2	0	0	0	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
a0001c0001t0013g0060	0/0	1	0	0	1	0	0	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
a0001c0001t0013g0065	0/0	1	0	0	1	0	0	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
a0001c0001t0014g0027	0/0	2	2	0	0	0	0	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
a0001c0001t0015g0037	0/0	1	0	0	1	0	0	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
a0001c0001t0016g0053	0/0	1	0	0	1	0	0	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
a0001c0001t0017g0059	0/0	1	0	0	0	0	1	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
a0001c0001t0018g0056	0/0	1	0	1	0	0	0	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
a0001c0001t0019g0061	0/0	1	0	0	0	0	1	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
a0001c0002t0003g0002	0/0	22	0	0	21	0	1	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
a0001c0002t0003g0040	0/0	1	0	0	1	0	0	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
a0001c0002t0003g0072	0/0	1	0	0	1	0	0	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
a0001c0002t0005g0011	0/0	5	4	1	0	0	0	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
a0001c0002t0005g0025	0/0	2	2	0	0	0	0	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
a0001c0002t0005g0044	0/0	1	1	0	0	0	0	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
a0001c0002t0007g0006	0/0	10	10	0	0	0	0	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
a0001c0002t0007g0041	0/0	1	1	0	0	0	0	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
a0001c0002t0008g0008	1/0	8	6	1	0	0	0	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
a0001c0002t0008g0042	0/0	1	1	0	0	0	0	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
a0001c0002t0009g0018	0/0	3	3	0	0	0	0	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
a0001c0002t0009g0026	0/0	2	2	0	0	0	0	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
a0001c0004t0001g0007	0/0	9	0	0	9	0	0	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
a0001c0004t0001g0021	0/0	2	0	0	2	0	0	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
a0001c0005t0005g0010	0/0	5	5	0	0	0	0	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
a0001c0010t0001g0070	0/0	1	0	0	0	0	1	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
a0001c0013t0001g0055	0/0	1	0	0	0	0	1	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
a0001c0015t0001g0063	0/0	1	1	0	0	0	0	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
a0001c0016t0020g0074	0/0	1	1	0	0	0	0	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
a0002c0003t0002g0003	0/0	18	1	8	8	0	1	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
a0002c0003t0002g0020	0/0	3	3	0	0	0	0	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
a0002c0003t0002g0034	0/0	2	0	0	0	0	2	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
a0002c0003t0002g0035	0/0	2	0	0	0	0	2	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
a0002c0017t0002g0076	0/0	1	0	0	0	0	1	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
a0003c0008t0001g0030	0/0	2	0	0	2	0	0	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
a0004c0007t0005g0023	0/0	2	2	0	0	0	0	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
a0005c0006t0005g0022	0/0	2	2	0	0	0	0	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
a0006c0009t0002g0036	0/0	2	0	2	0	0	0	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
a0007c0011t0001g0051	0/0	1	0	0	1	0	0	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
a0008c0014t0009g0045	0/0	1	1	0	0	0	0	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
a0009c0012t0001g0052	0/0	1	0	0	1	0	0	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636

sampleid	ID haplotypeid	ahapid	chapid	thapid	ghapid	gpopname	popname	regionname	genename	chr	start	end
HG00099	hp1	a0001	c0001	t0001	g0001	EUR	GBR	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
HG00099	hp2	a0001	c0001	t0004	g0004	EUR	GBR	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
HG00140	hp1	a0001	c0001	t0001	g0001	EUR	GBR	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
HG00140	hp2	a0001	c0001	t0001	g0001	EUR	GBR	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
HG00280	hp1	a0001	c0001	t0001	g0001	EUR	FIN	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
HG00280	hp2	a0001	c0001	t0004	g0004	EUR	FIN	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
HG00323	hp1	a0001	c0001	t0004	g0004	EUR	FIN	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
HG00323	hp2	a0001	c0001	t0001	g0001	EUR	FIN	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
HG00423	hp1	a0001	c0001	t0001	g0009	EAS	CHS	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
HG00423	hp2	a0001	c0001	t0001	g0001	EAS	CHS	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
HG00438	hp1	a0001	c0001	t0001	g0001	EAS	CHS	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
HG00438	hp2	a0001	c0001	t0001	g0001	EAS	CHS	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
HG00544	hp1	a0001	c0001	t0001	g0012	EAS	CHS	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
HG00544	hp2	a0002	c0003	t0002	g0003	EAS	CHS	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
HG00558	hp1	a0001	c0001	t0001	g0001	EAS	CHS	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
HG00558	hp2	a0002	c0003	t0002	g0003	EAS	CHS	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
HG00597	hp1	a0001	c0002	t0003	g0002	EAS	CHS	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
HG00597	hp2	a0001	c0001	t0001	g0001	EAS	CHS	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
HG00609	hp1	a0001	c0001	t0001	g0001	EAS	CHS	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
HG00609	hp2	a0001	c0002	t0003	g0002	EAS	CHS	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
HG00621	hp1	a0001	c0002	t0003	g0040	EAS	CHS	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
HG00621	hp2	a0001	c0001	t0001	g0001	EAS	CHS	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
HG00639	hp1	a0001	c0001	t0004	g0004	AMR	PUR	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
HG00639	hp2	a0001	c0001	t0001	g0001	AMR	PUR	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
HG00642	hp1	a0001	c0001	t0001	g0001	AMR	PUR	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
HG00642	hp2	a0002	c0003	t0002	g0003	AMR	PUR	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
HG00673	hp1	a0001	c0001	t0001	g0001	EAS	CHS	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
HG00673	hp2	a0001	c0001	t0015	g0037	EAS	CHS	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
HG00733	hp1	a0002	c0003	t0002	g0003	AMR	PUR	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
HG00733	hp2	a0001	c0001	t0001	g0016	AMR	PUR	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
HG00735	hp1	a0001	c0001	t0001	g0009	AMR	PUR	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
HG00735	hp2	a0002	c0003	t0002	g0003	AMR	PUR	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
HG00738	hp1	a0001	c0001	t0001	g0001	AMR	PUR	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
HG00738	hp2	a0001	c0001	t0018	g0056	AMR	PUR	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
HG00741	hp1	a0001	c0001	t0001	g0019	AMR	PUR	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
HG00741	hp2	a0001	c0001	t0001	g0001	AMR	PUR	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
HG01069	hp1	a0001	c0001	t0004	g0004	AMR	PUR	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
HG01069	hp2	a0001	c0001	t0001	g0016	AMR	PUR	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
HG01070	hp1	a0001	c0001	t0001	g0001	AMR	PUR	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
HG01070	hp2	a0001	c0001	t0006	g0005	AMR	PUR	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
HG01071	hp1	a0001	c0001	t0004	g0004	AMR	PUR	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
HG01071	hp2	a0001	c0001	t0001	g0001	AMR	PUR	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
HG01074	hp1	a0002	c0003	t0002	g0003	AMR	PUR	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
HG01074	hp2	a0001	c0001	t0004	g0064	AMR	PUR	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
HG01081	hp1	a0001	c0001	t0001	g0016	AMR	PUR	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
HG01081	hp2	a0001	c0001	t0001	g0001	AMR	PUR	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
HG01099	hp1	a0001	c0001	t0001	g0001	AMR	PUR	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
HG01099	hp2	a0001	c0001	t0001	g0001	AMR	PUR	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
HG01106	hp1	a0001	c0001	t0006	g0005	AMR	PUR	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
HG01106	hp2	a0001	c0001	t0004	g0004	AMR	PUR	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
HG01109	hp1	a0001	c0001	t0001	g0001	AMR	PUR	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
HG01109	hp2	a0001	c0001	t0004	g0004	AMR	PUR	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
HG01167	hp1	a0002	c0003	t0002	g0003	AMR	PUR	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
HG01167	hp2	a0006	c0009	t0002	g0036	AMR	PUR	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
HG01168	hp1	a0001	c0001	t0001	g0071	AMR	PUR	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
HG01168	hp2	a0001	c0001	t0012	g0033	AMR	PUR	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
HG01169	hp1	a0006	c0009	t0002	g0036	AMR	PUR	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
HG01169	hp2	a0001	c0001	t0012	g0033	AMR	PUR	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
HG01175	hp1	a0001	c0002	t0005	g0011	AMR	PUR	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
HG01175	hp2	a0001	c0001	t0001	g0001	AMR	PUR	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
HG01192	hp1	a0001	c0001	t0006	g0005	AMR	PUR	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
HG01192	hp2	a0001	c0001	t0004	g0004	AMR	PUR	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
HG01243	hp1	a0001	c0001	t0004	g0054	AMR	PUR	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
HG01243	hp2	a0001	c0002	t0008	g0008	AMR	PUR	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
HG01255	hp1	a0001	c0001	t0004	g0062	AMR	CLM	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
HG01255	hp2	a0001	c0001	t0001	g0019	AMR	CLM	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
HG01256	hp1	a0001	c0001	t0001	g0001	AMR	CLM	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
HG01256	hp2	a0001	c0001	t0004	g0004	AMR	CLM	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
HG01257	hp1	a0002	c0003	t0002	g0003	AMR	CLM	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
HG01257	hp2	a0001	c0001	t0001	g0001	AMR	CLM	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
HG01258	hp1	a0001	c0001	t0004	g0004	AMR	CLM	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
HG01258	hp2	a0002	c0003	t0002	g0003	AMR	CLM	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
HG01261	hp1	a0001	c0001	t0001	g0001	AMR	CLM	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
HG01261	hp2	a0001	c0001	t0001	g0001	AMR	CLM	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
HG01346	hp1	a0001	c0001	t0004	g0004	AMR	CLM	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
HG01346	hp2	a0001	c0001	t0001	g0001	AMR	CLM	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
HG01358	hp1	a0001	c0001	t0001	g0058	AMR	CLM	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
HG01358	hp2	a0001	c0001	t0001	g0001	AMR	CLM	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
HG01433	hp1	a0001	c0001	t0001	g0069	AMR	CLM	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
HG01433	hp2	a0001	c0001	t0001	g0001	AMR	CLM	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
HG01496	hp1	a0001	c0001	t0006	g0005	AMR	CLM	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
HG01496	hp2	a0001	c0001	t0001	g0001	AMR	CLM	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
HG01515	hp1	a0001	c0001	t0001	g0001	EUR	IBS	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
HG01515	hp2	a0001	c0001	t0001	g0047	EUR	IBS	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
HG01517	hp1	a0001	c0001	t0001	g0001	EUR	IBS	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
HG01517	hp2	a0001	c0001	t0001	g0046	EUR	IBS	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
HG01884	hp1	a0001	c0002	t0008	g0008	AFR	ACB	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
HG01884	hp2	a0001	c0001	t0001	g0024	AFR	ACB	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
HG01928	hp1	a0001	c0001	t0001	g0001	AMR	PEL	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
HG01928	hp2	a0001	c0001	t0001	g0001	AMR	PEL	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
HG01943	hp1	a0001	c0001	t0001	g0001	AMR	PEL	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
HG01943	hp2	a0001	c0001	t0006	g0005	AMR	PEL	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
HG01975	hp1	a0001	c0001	t0006	g0005	AMR	PEL	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
HG01975	hp2	a0001	c0001	t0001	g0001	AMR	PEL	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
HG01978	hp1	a0001	c0001	t0006	g0005	AMR	PEL	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
HG01978	hp2	a0001	c0001	t0001	g0001	AMR	PEL	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
HG01981	hp1	a0002	c0003	t0002	g0003	AMR	PEL	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
HG01981	hp2	a0001	c0001	t0006	g0005	AMR	PEL	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
HG01993	hp1	a0001	c0001	t0001	g0073	AMR	PEL	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
HG01993	hp2	a0001	c0001	t0001	g0009	AMR	PEL	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
HG02004	hp1	a0001	c0001	t0010	g0014	AMR	PEL	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
HG02004	hp2	a0001	c0001	t0006	g0005	AMR	PEL	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
HG02015	hp1	a0001	c0002	t0003	g0002	EAS	KHV	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
HG02015	hp2	a0001	c0001	t0001	g0001	EAS	KHV	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
HG02040	hp1	a0001	c0002	t0003	g0002	EAS	KHV	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
HG02040	hp2	a0001	c0001	t0001	g0001	EAS	KHV	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
HG02055	hp1	a0001	c0001	t0001	g0001	AFR	ACB	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
HG02055	hp2	a0001	c0001	t0001	g0066	AFR	ACB	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
HG02074	hp1	a0001	c0001	t0001	g0001	EAS	KHV	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
HG02074	hp2	a0001	c0001	t0001	g0001	EAS	KHV	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
HG02083	hp1	a0001	c0001	t0001	g0001	EAS	KHV	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
HG02083	hp2	a0001	c0001	t0001	g0001	EAS	KHV	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
HG02129	hp1	a0001	c0001	t0001	g0032	EAS	KHV	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
HG02129	hp2	a0001	c0001	t0001	g0001	EAS	KHV	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
HG02135	hp1	a0001	c0001	t0016	g0053	EAS	KHV	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
HG02135	hp2	a0001	c0001	t0001	g0001	EAS	KHV	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
HG02145	hp1	a0001	c0002	t0009	g0018	AFR	ACB	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
HG02145	hp2	a0005	c0006	t0005	g0022	AFR	ACB	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
HG02148	hp1	a0001	c0001	t0006	g0005	AMR	PEL	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
HG02148	hp2	a0001	c0001	t0001	g0001	AMR	PEL	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
HG02155	hp1	a0001	c0001	t0001	g0032	EAS	CDX	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
HG02155	hp2	a0001	c0001	t0001	g0001	EAS	CDX	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
HG02257	hp1	a0001	c0001	t0014	g0027	AFR	ACB	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
HG02257	hp2	a0001	c0002	t0007	g0006	AFR	ACB	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
HG02258	hp1	a0001	c0002	t0007	g0006	AFR	ACB	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
HG02258	hp2	a0001	c0001	t0001	g0001	AFR	ACB	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
HG02273	hp1	a0001	c0001	t0004	g0004	AMR	PEL	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
HG02273	hp2	a0001	c0001	t0006	g0005	AMR	PEL	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
HG02293	hp1	a0001	c0001	t0001	g0001	AMR	PEL	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
HG02293	hp2	a0001	c0001	t0006	g0005	AMR	PEL	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
HG02451	hp1	a0001	c0001	t0001	g0024	AFR	ACB	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
HG02451	hp2	a0001	c0002	t0005	g0025	AFR	ACB	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
HG02523	hp1	a0009	c0012	t0001	g0052	EAS	KHV	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
HG02523	hp2	a0001	c0001	t0001	g0001	EAS	KHV	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
HG02572	hp1	a0001	c0001	t0001	g0001	AFR	GWD	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
HG02572	hp2	a0008	c0014	t0009	g0045	AFR	GWD	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
HG02615	hp1	a0001	c0001	t0002	g0017	AFR	GWD	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
HG02615	hp2	a0001	c0001	t0001	g0057	AFR	GWD	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
HG02622	hp1	a0001	c0001	t0002	g0017	AFR	GWD	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
HG02622	hp2	a0002	c0003	t0002	g0020	AFR	GWD	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
HG02630	hp1	a0001	c0002	t0005	g0011	AFR	GWD	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
HG02630	hp2	a0001	c0001	t0002	g0013	AFR	GWD	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
HG02647	hp1	a0001	c0002	t0008	g0008	AFR	GWD	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
HG02647	hp2	a0001	c0001	t0001	g0001	AFR	GWD	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
HG02683	hp1	a0002	c0003	t0002	g0034	SAS	PJL	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
HG02683	hp2	a0001	c0001	t0001	g0068	SAS	PJL	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
HG02698	hp1	a0001	c0001	t0001	g0049	SAS	PJL	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
HG02698	hp2	a0001	c0001	t0017	g0059	SAS	PJL	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
HG02717	hp1	a0001	c0002	t0009	g0026	AFR	GWD	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
HG02717	hp2	a0004	c0007	t0005	g0023	AFR	GWD	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
HG02723	hp1	a0001	c0001	t0001	g0001	AFR	GWD	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
HG02723	hp2	a0001	c0001	t0001	g0031	AFR	GWD	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
HG02735	hp1	a0002	c0017	t0002	g0076	SAS	PJL	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
HG02735	hp2	a0001	c0001	t0001	g0001	SAS	PJL	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
HG02738	hp1	a0001	c0001	t0001	g0001	SAS	PJL	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
HG02738	hp2	a0002	c0003	t0002	g0003	SAS	PJL	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
HG02809	hp1	a0001	c0002	t0007	g0006	AFR	GWD	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
HG02809	hp2	a0001	c0005	t0005	g0010	AFR	GWD	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
HG02886	hp1	a0001	c0001	t0001	g0001	AFR	GWD	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
HG02886	hp2	a0001	c0016	t0020	g0074	AFR	GWD	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
HG02895	hp1	a0001	c0002	t0005	g0011	AFR	GWD	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
HG02895	hp2	a0001	c0001	t0002	g0017	AFR	GWD	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
HG02897	hp1	a0001	c0001	t0001	g0001	AFR	GWD	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
HG02897	hp2	a0001	c0001	t0002	g0017	AFR	GWD	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
HG02965	hp1	a0002	c0003	t0002	g0020	AFR	ESN	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
HG02965	hp2	a0001	c0001	t0001	g0001	AFR	ESN	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
HG02970	hp1	a0005	c0006	t0005	g0022	AFR	ESN	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
HG02970	hp2	a0001	c0001	t0001	g0031	AFR	ESN	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
HG02976	hp1	a0001	c0002	t0009	g0018	AFR	ESN	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
HG02976	hp2	a0001	c0001	t0001	g0038	AFR	ESN	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
HG03098	hp1	a0001	c0001	t0001	g0001	AFR	MSL	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
HG03098	hp2	a0001	c0001	t0002	g0078	AFR	MSL	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
HG03130	hp1	a0001	c0002	t0007	g0006	AFR	ESN	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
HG03130	hp2	a0001	c0001	t0002	g0077	AFR	ESN	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
HG03139	hp1	a0001	c0005	t0005	g0010	AFR	ESN	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
HG03139	hp2	a0001	c0001	t0001	g0001	AFR	ESN	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
HG03195	hp1	a0001	c0001	t0001	g0001	AFR	ESN	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
HG03195	hp2	a0001	c0002	t0007	g0006	AFR	ESN	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
HG03209	hp1	a0001	c0001	t0002	g0013	AFR	MSL	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
HG03209	hp2	a0001	c0001	t0001	g0012	AFR	MSL	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
HG03225	hp1	a0001	c0001	t0001	g0001	AFR	MSL	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
HG03225	hp2	a0001	c0001	t0001	g0001	AFR	MSL	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
HG03453	hp1	a0001	c0001	t0002	g0013	AFR	MSL	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
HG03453	hp2	a0001	c0002	t0007	g0006	AFR	MSL	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
HG03486	hp1	a0001	c0002	t0008	g0008	AFR	MSL	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
HG03486	hp2	a0002	c0003	t0002	g0020	AFR	MSL	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
HG03490	hp1	a0001	c0001	t0001	g0001	SAS	PJL	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
HG03490	hp2	a0002	c0003	t0002	g0035	SAS	PJL	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
HG03491	hp1	a0001	c0001	t0001	g0001	SAS	PJL	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
HG03491	hp2	a0001	c0001	t0001	g0001	SAS	PJL	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
HG03492	hp1	a0002	c0003	t0002	g0035	SAS	PJL	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
HG03492	hp2	a0001	c0001	t0001	g0001	SAS	PJL	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
HG03516	hp1	a0001	c0002	t0008	g0008	AFR	ESN	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
HG03516	hp2	a0001	c0001	t0001	g0001	AFR	ESN	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
HG03540	hp1	a0001	c0002	t0007	g0006	AFR	GWD	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
HG03540	hp2	a0001	c0002	t0008	g0008	AFR	GWD	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
HG03579	hp1	a0001	c0001	t0001	g0012	AFR	MSL	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
HG03579	hp2	a0001	c0001	t0002	g0013	AFR	MSL	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
HG03654	hp1	a0001	c0001	t0001	g0001	SAS	PJL	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
HG03654	hp2	a0001	c0001	t0001	g0001	SAS	PJL	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
HG03669	hp1	a0001	c0002	t0003	g0002	SAS	PJL	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
HG03669	hp2	a0001	c0001	t0001	g0019	SAS	PJL	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
HG03688	hp1	a0001	c0001	t0001	g0001	SAS	STU	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
HG03688	hp2	a0001	c0013	t0001	g0055	SAS	STU	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
HG03831	hp1	a0001	c0001	t0001	g0001	SAS	BEB	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
HG03831	hp2	a0001	c0001	t0019	g0061	SAS	BEB	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
HG03942	hp1	a0001	c0001	t0001	g0001	SAS	BEB	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
HG03942	hp2	a0001	c0001	t0001	g0001	SAS	BEB	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
HG04184	hp1	a0001	c0001	t0004	g0004	SAS	BEB	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
HG04184	hp2	a0001	c0001	t0001	g0001	SAS	BEB	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
HG04199	hp1	a0001	c0001	t0001	g0001	SAS	STU	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
HG04199	hp2	a0001	c0001	t0001	g0001	SAS	STU	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
HG04204	hp1	a0001	c0001	t0001	g0001	SAS	STU	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
HG04204	hp2	a0002	c0003	t0002	g0034	SAS	STU	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
HG04228	hp1	a0001	c0001	t0004	g0004	SAS	STU	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
HG04228	hp2	a0001	c0001	t0001	g0001	SAS	STU	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
NA18522	hp1	a0001	c0002	t0007	g0006	AFR	YRI	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
NA18522	hp2	a0001	c0005	t0005	g0010	AFR	YRI	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
NA18612	hp1	a0001	c0001	t0001	g0067	EAS	CHB	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
NA18612	hp2	a0001	c0001	t0001	g0001	EAS	CHB	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
NA18939	hp1	a0001	c0004	t0001	g0007	EAS	JPT	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
NA18939	hp2	a0001	c0001	t0011	g0029	EAS	JPT	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
NA18940	hp1	a0001	c0001	t0001	g0001	EAS	JPT	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
NA18940	hp2	a0001	c0002	t0003	g0002	EAS	JPT	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
NA18941	hp1	a0001	c0004	t0001	g0021	EAS	JPT	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
NA18941	hp2	a0001	c0001	t0001	g0039	EAS	JPT	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
NA18943	hp1	a0001	c0001	t0001	g0001	EAS	JPT	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
NA18943	hp2	a0001	c0001	t0001	g0001	EAS	JPT	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
NA18944	hp1	a0002	c0003	t0002	g0003	EAS	JPT	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
NA18944	hp2	a0001	c0001	t0001	g0001	EAS	JPT	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
NA18946	hp1	a0001	c0004	t0001	g0007	EAS	JPT	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
NA18946	hp2	a0003	c0008	t0001	g0030	EAS	JPT	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
NA18947	hp1	a0001	c0001	t0001	g0015	EAS	JPT	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
NA18947	hp2	a0001	c0001	t0001	g0001	EAS	JPT	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
NA18950	hp1	a0007	c0011	t0001	g0051	EAS	JPT	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
NA18950	hp2	a0001	c0001	t0001	g0001	EAS	JPT	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
NA18951	hp1	a0001	c0001	t0001	g0001	EAS	JPT	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
NA18951	hp2	a0001	c0001	t0001	g0028	EAS	JPT	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
NA18959	hp1	a0001	c0001	t0001	g0028	EAS	JPT	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
NA18959	hp2	a0001	c0001	t0001	g0001	EAS	JPT	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
NA18965	hp1	a0001	c0002	t0003	g0002	EAS	JPT	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
NA18965	hp2	a0003	c0008	t0001	g0030	EAS	JPT	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
NA18966	hp1	a0001	c0002	t0003	g0002	EAS	JPT	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
NA18966	hp2	a0001	c0001	t0001	g0001	EAS	JPT	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
NA18973	hp1	a0002	c0003	t0002	g0003	EAS	JPT	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
NA18973	hp2	a0001	c0001	t0001	g0001	EAS	JPT	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
NA18974	hp1	a0001	c0002	t0003	g0002	EAS	JPT	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
NA18974	hp2	a0001	c0001	t0001	g0001	EAS	JPT	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
NA18980	hp1	a0001	c0004	t0001	g0007	EAS	JPT	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
NA18980	hp2	a0001	c0001	t0001	g0001	EAS	JPT	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
NA18981	hp1	a0001	c0001	t0001	g0001	EAS	JPT	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
NA18981	hp2	a0002	c0003	t0002	g0003	EAS	JPT	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
NA18982	hp1	a0001	c0001	t0013	g0065	EAS	JPT	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
NA18982	hp2	a0001	c0002	t0003	g0002	EAS	JPT	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
NA18983	hp1	a0001	c0001	t0013	g0060	EAS	JPT	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
NA18983	hp2	a0001	c0001	t0001	g0001	EAS	JPT	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
NA18984	hp1	a0001	c0001	t0001	g0001	EAS	JPT	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
NA18984	hp2	a0001	c0002	t0003	g0002	EAS	JPT	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
NA18985	hp1	a0001	c0001	t0001	g0001	EAS	JPT	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
NA18985	hp2	a0001	c0001	t0001	g0009	EAS	JPT	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
NA18988	hp1	a0001	c0001	t0001	g0001	EAS	JPT	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
NA18988	hp2	a0001	c0002	t0003	g0002	EAS	JPT	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
NA18989	hp1	a0001	c0001	t0001	g0001	EAS	JPT	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
NA18989	hp2	a0001	c0001	t0001	g0009	EAS	JPT	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
NA18992	hp1	a0001	c0001	t0001	g0001	EAS	JPT	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
NA18992	hp2	a0001	c0004	t0001	g0007	EAS	JPT	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
NA18993	hp1	a0001	c0002	t0003	g0002	EAS	JPT	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
NA18993	hp2	a0001	c0002	t0003	g0072	EAS	JPT	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
NA18994	hp1	a0001	c0001	t0001	g0012	EAS	JPT	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
NA18994	hp2	a0002	c0003	t0002	g0003	EAS	JPT	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
NA18995	hp1	a0001	c0001	t0001	g0001	EAS	JPT	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
NA18995	hp2	a0001	c0004	t0001	g0007	EAS	JPT	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
NA18997	hp1	a0001	c0001	t0010	g0014	EAS	JPT	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
NA18997	hp2	a0001	c0002	t0003	g0002	EAS	JPT	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
NA18998	hp1	a0001	c0002	t0003	g0002	EAS	JPT	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
NA18998	hp2	a0001	c0001	t0001	g0001	EAS	JPT	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
NA18999	hp1	a0001	c0004	t0001	g0007	EAS	JPT	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
NA18999	hp2	a0001	c0001	t0011	g0029	EAS	JPT	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
NA19000	hp1	a0001	c0001	t0001	g0001	EAS	JPT	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
NA19000	hp2	a0001	c0001	t0001	g0001	EAS	JPT	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
NA19001	hp1	a0001	c0001	t0001	g0001	EAS	JPT	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
NA19001	hp2	a0001	c0001	t0001	g0009	EAS	JPT	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
NA19004	hp1	a0001	c0002	t0003	g0002	EAS	JPT	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
NA19004	hp2	a0001	c0001	t0001	g0001	EAS	JPT	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
NA19005	hp1	a0001	c0001	t0001	g0001	EAS	JPT	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
NA19005	hp2	a0001	c0001	t0001	g0015	EAS	JPT	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
NA19007	hp1	a0001	c0001	t0010	g0014	EAS	JPT	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
NA19007	hp2	a0001	c0002	t0003	g0002	EAS	JPT	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
NA19009	hp1	a0001	c0004	t0001	g0007	EAS	JPT	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
NA19009	hp2	a0001	c0001	t0001	g0001	EAS	JPT	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
NA19010	hp1	a0001	c0001	t0001	g0012	EAS	JPT	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
NA19010	hp2	a0001	c0004	t0001	g0007	EAS	JPT	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
NA19030	hp1	a0001	c0002	t0008	g0042	AFR	LWK	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
NA19030	hp2	a0001	c0005	t0005	g0010	AFR	LWK	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
NA19043	hp1	a0001	c0002	t0007	g0041	AFR	LWK	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
NA19043	hp2	a0001	c0002	t0008	g0008	AFR	LWK	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
NA19056	hp1	a0001	c0001	t0001	g0001	EAS	JPT	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
NA19056	hp2	a0001	c0001	t0001	g0050	EAS	JPT	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
NA19058	hp1	a0001	c0001	t0010	g0014	EAS	JPT	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
NA19058	hp2	a0001	c0002	t0003	g0002	EAS	JPT	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
NA19060	hp1	a0001	c0004	t0001	g0007	EAS	JPT	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
NA19060	hp2	a0001	c0001	t0001	g0001	EAS	JPT	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
NA19062	hp1	a0001	c0001	t0001	g0001	EAS	JPT	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
NA19062	hp2	a0001	c0002	t0003	g0002	EAS	JPT	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
NA19063	hp1	a0001	c0001	t0001	g0001	EAS	JPT	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
NA19063	hp2	a0001	c0004	t0001	g0021	EAS	JPT	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
NA19064	hp1	a0001	c0001	t0001	g0001	EAS	JPT	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
NA19064	hp2	a0002	c0003	t0002	g0003	EAS	JPT	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
NA19066	hp1	a0001	c0001	t0001	g0001	EAS	JPT	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
NA19066	hp2	a0001	c0002	t0003	g0002	EAS	JPT	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
NA19067	hp1	a0001	c0001	t0001	g0015	EAS	JPT	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
NA19067	hp2	a0001	c0001	t0001	g0001	EAS	JPT	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
NA19070	hp1	a0001	c0001	t0001	g0009	EAS	JPT	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
NA19070	hp2	a0001	c0001	t0001	g0048	EAS	JPT	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
NA19075	hp1	a0001	c0001	t0001	g0015	EAS	JPT	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
NA19075	hp2	a0001	c0001	t0001	g0009	EAS	JPT	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
NA19077	hp1	a0002	c0003	t0002	g0003	EAS	JPT	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
NA19077	hp2	a0001	c0001	t0001	g0001	EAS	JPT	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
NA19084	hp1	a0001	c0002	t0003	g0002	EAS	JPT	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
NA19084	hp2	a0001	c0001	t0001	g0001	EAS	JPT	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
NA19090	hp1	a0001	c0001	t0001	g0001	EAS	JPT	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
NA19090	hp2	a0001	c0002	t0003	g0002	EAS	JPT	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
NA19240	hp1	a0001	c0001	t0014	g0027	AFR	YRI	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
NA19240	hp2	a0001	c0002	t0005	g0044	AFR	YRI	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
NA20129	hp1	a0001	c0001	t0002	g0013	AFR	ASW	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
NA20129	hp2	a0001	c0001	t0001	g0043	AFR	ASW	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
NA20752	hp1	a0001	c0001	t0001	g0001	EUR	TSI	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
NA20752	hp2	a0001	c0001	t0004	g0004	EUR	TSI	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
NA20805	hp1	a0001	c0001	t0001	g0001	EUR	TSI	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
NA20805	hp2	a0001	c0001	t0001	g0001	EUR	TSI	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
NA20905	hp1	a0001	c0010	t0001	g0070	SAS	GIH	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
NA20905	hp2	a0001	c0001	t0001	g0001	SAS	GIH	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
HG02109	hp1	a0001	c0002	t0009	g0018	AFR	ACB	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
HG02109	hp2	a0001	c0001	t0002	g0075	AFR	ACB	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
HG02486	hp1	a0001	c0002	t0007	g0006	AFR	ACB	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
HG02486	hp2	a0001	c0002	t0009	g0026	AFR	ACB	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
HG02559	hp1	a0001	c0005	t0005	g0010	AFR	ACB	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
HG02559	hp2	a0001	c0001	t0001	g0001	AFR	ACB	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
HG03471	hp1	a0001	c0002	t0005	g0011	AFR	MSL	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
HG03471	hp2	a0001	c0015	t0001	g0063	AFR	MSL	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
HG06807	hp1	a0001	c0002	t0005	g0025	AFR	USA	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
HG06807	hp2	a0001	c0002	t0007	g0006	AFR	USA	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
NA20300	hp1	a0001	c0002	t0005	g0011	AFR	USA	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
NA20300	hp2	a0001	c0001	t0001	g0016	AFR	USA	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
NA21309	hp1	a0004	c0007	t0005	g0023	AFR	LWK	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
NA21309	hp2	a0002	c0003	t0002	g0003	AFR	LWK	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
homoSapiens_chm13v2	hp1	a0001	c0001	t0001	g0001	REF	REF	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636
homoSapiens_grch38	hp1	a0001	c0002	t0008	g0008	REF	REF	ATG9A_chr2_219214380_219234636	ATG9A	chr2	219214380	219234636

chr:pos	ref	alt	# # of ahapid:amino-acid(protein) level	ahapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	hgvs_p	genename	geneid	featuretype	featureid	transcript_biotype	rank	cdna cdna pos length	cds cds pos length	aa aa pos length	chr	pos
chr2:219220823	C C	T T	1	a0005 a0005	2	HG02145.hp2 HG02970.hp1 HG02145.hp2 HG02970.hp1	missense_variant	MODERATE	c.2438G>A c.2438G>A	p.Gly813Glu p.Gly813Glu	ATG9A	ENSG00000198925.12	transcript	ENST00000361242.9	protein_coding	15/16	2621/3770	2438/2520	813/839	chr2	219220823
chr2:219221125	T T	C C	1	a0004 a0004	2	HG02717.hp2 NA21309.hp1 HG02717.hp2 NA21309.hp1	missense_variant	MODERATE	c.2323A>G c.2323A>G	p.Thr775Ala p.Thr775Ala	ATG9A	ENSG00000198925.12	transcript	ENST00000361242.9	protein_coding	14/16	2506/3770	2323/2520	775/839	chr2	219221125
chr2:219222159	G G	A A	1	a0008 a0008	1	HG02572.hp2 HG02572.hp2	missense_variant	MODERATE	c.2036C>T c.2036C>T	p.Ala679Val p.Ala679Val	ATG9A	ENSG00000198925.12	transcript	ENST00000361242.9	protein_coding	13/16	2219/3770	2036/2520	679/839	chr2	219222159
chr2:219222322	T T	A A	1	a0003 a0003	2	NA18946.hp2 NA18965.hp2 NA18946.hp2 NA18965.hp2	missense_variant	MODERATE	c.1977A>T c.1977A>T	p.Gln659His p.Gln659His	ATG9A	ENSG00000198925.12	transcript	ENST00000361242.9	protein_coding	12/16	2160/3770	1977/2520	659/839	chr2	219222322
chr2:219222719	T T	C C	2	a0002 a0006 a0002 a0006	28	HG00544.hp2 HG00558.hp2 HG00642.hp2 others(25): Show HG00544.hp2 HG00558.hp2 HG00642.hp2 HG00733.hp1 HG00735.hp2 HG01074.hp1 HG01167.hp1 HG01167.hp2 HG01169.hp1 HG01257.hp1 HG01258.hp2 HG01981.hp1 HG02622.hp2 HG02683.hp1 HG02735.hp1 HG02738.hp2 HG02965.hp1 HG03486.hp2 HG03490.hp2 HG03492.hp1 HG04204.hp2 NA18944.hp1 NA18973.hp1 NA18981.hp2 NA18994.hp2 NA19064.hp2 NA19077.hp1 NA21309.hp2	missense_variant	MODERATE	c.1774A>G c.1774A>G	p.Ser592Gly p.Ser592Gly	ATG9A	ENSG00000198925.12	transcript	ENST00000361242.9	protein_coding	11/16	1957/3770	1774/2520	592/839	chr2	219222719
chr2:219224113	C C	T T	1	a0007 a0007	1	NA18950.hp1 NA18950.hp1	missense_variant	MODERATE	c.1258G>A c.1258G>A	p.Val420Met p.Val420Met	ATG9A	ENSG00000198925.12	transcript	ENST00000361242.9	protein_coding	8/16	1441/3770	1258/2520	420/839	chr2	219224113
chr2:219224485	C C	T T	1	a0009 a0009	1	HG02523.hp1 HG02523.hp1	missense_variant	MODERATE	c.886G>A c.886G>A	p.Ala296Thr p.Ala296Thr	ATG9A	ENSG00000198925.12	transcript	ENST00000361242.9	protein_coding	8/16	1069/3770	886/2520	296/839	chr2	219224485
chr2:219225153	T T	A A	1	a0006 a0006	2	HG01167.hp2 HG01169.hp1 HG01167.hp2 HG01169.hp1	missense_variant	MODERATE	c.434A>T c.434A>T	p.His145Leu p.His145Leu	ATG9A	ENSG00000198925.12	transcript	ENST00000361242.9	protein_coding	7/16	617/3770	434/2520	145/839	chr2	219225153

chr:pos	ref	alt	# # of chapid	chapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	hgvs_p	genename	geneid	featuretype	featureid	transcript_biotype	rank	cdna cdna pos length	cds cds pos length	aa aa pos length	chr	pos
chr2:219221123	A A	G G	12	a0001c0001 a0001c0004 a0001c0010 others(9): Show a0001c0001 a0001c0004 a0001c0010 a0001c0013 a0001c0015 a0001c0016 a0002c0003 a0002c0017 a0003c0008 a0006c0009 a0007c0011 a0009c0012	281	HG00099.hp1 HG00099.hp2 HG00140.hp1 others(278): Show HG00099.hp1 HG00099.hp2 HG00140.hp1 HG00140.hp2 HG00280.hp1 HG00280.hp2 HG00323.hp1 HG00323.hp2 HG00423.hp1 HG00423.hp2 HG00438.hp1 HG00438.hp2 HG00544.hp1 HG00544.hp2 HG00558.hp1 HG00558.hp2 HG00597.hp2 HG00609.hp1 HG00621.hp2 HG00639.hp1 HG00639.hp2 HG00642.hp1 HG00642.hp2 HG00673.hp1 HG00673.hp2 HG00733.hp1 HG00733.hp2 HG00735.hp1 HG00735.hp2 HG00738.hp1 HG00738.hp2 HG00741.hp1 HG00741.hp2 HG01069.hp1 HG01069.hp2 HG01070.hp1 HG01070.hp2 HG01071.hp1 HG01071.hp2 HG01074.hp1 HG01074.hp2 HG01081.hp1 HG01081.hp2 HG01099.hp1 HG01099.hp2 HG01106.hp1 HG01106.hp2 HG01109.hp1 HG01109.hp2 HG01167.hp1 HG01167.hp2 HG01168.hp1 HG01168.hp2 HG01169.hp1 HG01169.hp2 HG01175.hp2 HG01192.hp1 HG01192.hp2 HG01243.hp1 HG01255.hp1 HG01255.hp2 HG01256.hp1 HG01256.hp2 HG01257.hp1 HG01257.hp2 HG01258.hp1 HG01258.hp2 HG01261.hp1 HG01261.hp2 HG01346.hp1 HG01346.hp2 HG01358.hp1 HG01358.hp2 HG01433.hp1 HG01433.hp2 HG01496.hp1 HG01496.hp2 HG01515.hp1 HG01515.hp2 HG01517.hp1 HG01517.hp2 HG01884.hp2 HG01928.hp1 HG01928.hp2 HG01943.hp1 HG01943.hp2 HG01975.hp1 HG01975.hp2 HG01978.hp1 HG01978.hp2 HG01981.hp1 HG01981.hp2 HG01993.hp1 HG01993.hp2 HG02004.hp1 HG02004.hp2 HG02015.hp2 HG02040.hp2 HG02055.hp1 HG02055.hp2 HG02074.hp1 HG02074.hp2 HG02083.hp1 HG02083.hp2 HG02109.hp2 HG02129.hp1 HG02129.hp2 HG02135.hp1 HG02135.hp2 HG02148.hp1 HG02148.hp2 HG02155.hp1 HG02155.hp2 HG02257.hp1 HG02258.hp2 HG02273.hp1 HG02273.hp2 HG02293.hp1 HG02293.hp2 HG02451.hp1 HG02523.hp1 HG02523.hp2 HG02559.hp2 HG02572.hp1 HG02615.hp1 HG02615.hp2 HG02622.hp1 HG02622.hp2 HG02630.hp2 HG02647.hp2 HG02683.hp1 HG02683.hp2 HG02698.hp1 HG02698.hp2 HG02723.hp1 HG02723.hp2 HG02735.hp1 HG02735.hp2 HG02738.hp1 HG02738.hp2 HG02886.hp1 HG02886.hp2 HG02895.hp2 HG02897.hp1 HG02897.hp2 HG02965.hp1 HG02965.hp2 HG02970.hp2 HG02976.hp2 HG03098.hp1 HG03098.hp2 HG03130.hp2 HG03139.hp2 HG03195.hp1 HG03209.hp1 HG03209.hp2 HG03225.hp1 HG03225.hp2 HG03453.hp1 HG03471.hp2 HG03486.hp2 HG03490.hp1 HG03490.hp2 HG03491.hp1 HG03491.hp2 HG03492.hp1 HG03492.hp2 HG03516.hp2 HG03579.hp1 HG03579.hp2 HG03654.hp1 HG03654.hp2 HG03669.hp2 HG03688.hp1 HG03688.hp2 HG03831.hp1 HG03831.hp2 HG03942.hp1 HG03942.hp2 HG04184.hp1 HG04184.hp2 HG04199.hp1 HG04199.hp2 HG04204.hp1 HG04204.hp2 HG04228.hp1 HG04228.hp2 NA18612.hp1 NA18612.hp2 NA18939.hp1 NA18939.hp2 NA18940.hp1 NA18941.hp1 NA18941.hp2 NA18943.hp1 NA18943.hp2 NA18944.hp1 NA18944.hp2 NA18946.hp1 NA18946.hp2 NA18947.hp1 NA18947.hp2 NA18950.hp1 NA18950.hp2 NA18951.hp1 NA18951.hp2 NA18959.hp1 NA18959.hp2 NA18965.hp2 NA18966.hp2 NA18973.hp1 NA18973.hp2 NA18974.hp2 NA18980.hp1 NA18980.hp2 NA18981.hp1 NA18981.hp2 NA18982.hp1 NA18983.hp1 NA18983.hp2 NA18984.hp1 NA18985.hp1 NA18985.hp2 NA18988.hp1 NA18989.hp1 NA18989.hp2 NA18992.hp1 NA18992.hp2 NA18994.hp1 NA18994.hp2 NA18995.hp1 NA18995.hp2 NA18997.hp1 NA18998.hp2 NA18999.hp1 NA18999.hp2 NA19000.hp1 NA19000.hp2 NA19001.hp1 NA19001.hp2 NA19004.hp2 NA19005.hp1 NA19005.hp2 NA19007.hp1 NA19009.hp1 NA19009.hp2 NA19010.hp1 NA19010.hp2 NA19056.hp1 NA19056.hp2 NA19058.hp1 NA19060.hp1 NA19060.hp2 NA19062.hp1 NA19063.hp1 NA19063.hp2 NA19064.hp1 NA19064.hp2 NA19066.hp1 NA19067.hp1 NA19067.hp2 NA19070.hp1 NA19070.hp2 NA19075.hp1 NA19075.hp2 NA19077.hp1 NA19077.hp2 NA19084.hp2 NA19090.hp1 NA19240.hp1 NA20129.hp1 NA20129.hp2 NA20300.hp2 NA20752.hp1 NA20752.hp2 NA20805.hp1 NA20805.hp2 NA20905.hp1 NA20905.hp2 NA21309.hp2 homoSapiens_chm13v2.hp1	synonymous_variant	LOW	c.2325T>C c.2325T>C	p.Thr775Thr p.Thr775Thr	ATG9A	ENSG00000198925.12	transcript	ENST00000361242.9	protein_coding	14/16	2508/3770	2325/2520	775/839	chr2	219221123
chr2:219222319	G G	A A	1	a0001c0015 a0001c0015	1	HG03471.hp2 HG03471.hp2	synonymous_variant	LOW	c.1980C>T c.1980C>T	p.Pro660Pro p.Pro660Pro	ATG9A	ENSG00000198925.12	transcript	ENST00000361242.9	protein_coding	12/16	2163/3770	1980/2520	660/839	chr2	219222319
chr2:219222439	A A	G G	1	a0001c0005 a0001c0005	5	HG02559.hp1 HG02809.hp2 HG03139.hp1 others(2): Show HG02559.hp1 HG02809.hp2 HG03139.hp1 NA18522.hp2 NA19030.hp2	synonymous_variant	LOW	c.1860T>C c.1860T>C	p.Leu620Leu p.Leu620Leu	ATG9A	ENSG00000198925.12	transcript	ENST00000361242.9	protein_coding	12/16	2043/3770	1860/2520	620/839	chr2	219222439
chr2:219222675	C C	T T	1	a0001c0013 a0001c0013	1	HG03688.hp2 HG03688.hp2	synonymous_variant	LOW	c.1818G>A c.1818G>A	p.Thr606Thr p.Thr606Thr	ATG9A	ENSG00000198925.12	transcript	ENST00000361242.9	protein_coding	11/16	2001/3770	1818/2520	606/839	chr2	219222675
chr2:219222771	T T	C C	1	a0001c0016 a0001c0016	1	HG02886.hp2 HG02886.hp2	synonymous_variant	LOW	c.1722A>G c.1722A>G	p.Thr574Thr p.Thr574Thr	ATG9A	ENSG00000198925.12	transcript	ENST00000361242.9	protein_coding	11/16	1905/3770	1722/2520	574/839	chr2	219222771
chr2:219224822	C C	T T	2	a0001c0004 a0007c0011 a0001c0004 a0007c0011	12	NA18939.hp1 NA18941.hp1 NA18946.hp1 others(9): Show NA18939.hp1 NA18941.hp1 NA18946.hp1 NA18950.hp1 NA18980.hp1 NA18992.hp2 NA18995.hp2 NA18999.hp1 NA19009.hp1 NA19010.hp2 NA19060.hp1 NA19063.hp2	synonymous_variant	LOW	c.549G>A c.549G>A	p.Val183Val p.Val183Val	ATG9A	ENSG00000198925.12	transcript	ENST00000361242.9	protein_coding	8/16	732/3770	549/2520	183/839	chr2	219224822
chr2:219224834	C C	T T	1	a0001c0010 a0001c0010	1	NA20905.hp1 NA20905.hp1	synonymous_variant	LOW	c.537G>A c.537G>A	p.Thr179Thr p.Thr179Thr	ATG9A	ENSG00000198925.12	transcript	ENST00000361242.9	protein_coding	8/16	720/3770	537/2520	179/839	chr2	219224834
chr2:219225425	T T	C C	1	a0002c0017 a0002c0017	1	HG02735.hp1 HG02735.hp1	synonymous_variant	LOW	c.360A>G c.360A>G	p.Gln120Gln p.Gln120Gln	ATG9A	ENSG00000198925.12	transcript	ENST00000361242.9	protein_coding	6/16	543/3770	360/2520	120/839	chr2	219225425

chr:pos	ref	alt	# # of thapid:transcript level	thapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	chr	pos
chr2:219219467	C C	T T	1	a0001c0001t0018 a0001c0001t0018	1	HG00738.hp2 HG00738.hp2	3_prime_UTR_variant	MODIFIER	c.980G>A c.980G>A	ATG9A	ENSG00000198925.12	transcript	ENST00000361242.9	protein_coding	16/16	980	chr2	219219467
chr2:219219470	C C	T T	1	a0001c0001t0010 a0001c0001t0010	4	HG02004.hp1 NA18997.hp1 NA19007.hp1 others(1): Show HG02004.hp1 NA18997.hp1 NA19007.hp1 NA19058.hp1	3_prime_UTR_variant	MODIFIER	c.977G>A c.977G>A	ATG9A	ENSG00000198925.12	transcript	ENST00000361242.9	protein_coding	16/16	977	chr2	219219470
chr2:219219628	C C	T T	33	a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 others(30): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 a0001c0001t0006 a0001c0001t0010 a0001c0001t0011 a0001c0001t0012 a0001c0001t0013 a0001c0001t0014 a0001c0001t0015 a0001c0001t0016 a0001c0001t0017 a0001c0001t0018 a0001c0001t0019 a0001c0002t0003 a0001c0002t0005 a0001c0002t0007 a0001c0002t0009 a0001c0004t0001 a0001c0005t0005 a0001c0010t0001 a0001c0013t0001 a0001c0015t0001 a0001c0016t0020 a0002c0003t0002 a0002c0017t0002 a0003c0008t0001 a0004c0007t0005 a0005c0006t0005 a0006c0009t0002 a0007c0011t0001 a0008c0014t0009 a0009c0012t0001	339	HG00099.hp1 HG00099.hp2 HG00140.hp1 others(336): Show HG00099.hp1 HG00099.hp2 HG00140.hp1 HG00140.hp2 HG00280.hp1 HG00280.hp2 HG00323.hp1 HG00323.hp2 HG00423.hp1 HG00423.hp2 HG00438.hp1 HG00438.hp2 HG00544.hp1 HG00544.hp2 HG00558.hp1 HG00558.hp2 HG00597.hp1 HG00597.hp2 HG00609.hp1 HG00609.hp2 HG00621.hp1 HG00621.hp2 HG00639.hp1 HG00639.hp2 HG00642.hp1 HG00642.hp2 HG00673.hp1 HG00673.hp2 HG00733.hp1 HG00733.hp2 HG00735.hp1 HG00735.hp2 HG00738.hp1 HG00738.hp2 HG00741.hp1 HG00741.hp2 HG01069.hp1 HG01069.hp2 HG01070.hp1 HG01070.hp2 HG01071.hp1 HG01071.hp2 HG01074.hp1 HG01074.hp2 HG01081.hp1 HG01081.hp2 HG01099.hp1 HG01099.hp2 HG01106.hp1 HG01106.hp2 HG01109.hp1 HG01109.hp2 HG01167.hp1 HG01167.hp2 HG01168.hp1 HG01168.hp2 HG01169.hp1 HG01169.hp2 HG01175.hp1 HG01175.hp2 HG01192.hp1 HG01192.hp2 HG01243.hp1 HG01255.hp1 HG01255.hp2 HG01256.hp1 HG01256.hp2 HG01257.hp1 HG01257.hp2 HG01258.hp1 HG01258.hp2 HG01261.hp1 HG01261.hp2 HG01346.hp1 HG01346.hp2 HG01358.hp1 HG01358.hp2 HG01433.hp1 HG01433.hp2 HG01496.hp1 HG01496.hp2 HG01515.hp1 HG01515.hp2 HG01517.hp1 HG01517.hp2 HG01884.hp2 HG01928.hp1 HG01928.hp2 HG01943.hp1 HG01943.hp2 HG01975.hp1 HG01975.hp2 HG01978.hp1 HG01978.hp2 HG01981.hp1 HG01981.hp2 HG01993.hp1 HG01993.hp2 HG02004.hp1 HG02004.hp2 HG02015.hp1 HG02015.hp2 HG02040.hp1 HG02040.hp2 HG02055.hp1 HG02055.hp2 HG02074.hp1 HG02074.hp2 HG02083.hp1 HG02083.hp2 HG02109.hp1 HG02109.hp2 HG02129.hp1 HG02129.hp2 HG02135.hp1 HG02135.hp2 HG02145.hp1 HG02145.hp2 HG02148.hp1 HG02148.hp2 HG02155.hp1 HG02155.hp2 HG02257.hp1 HG02257.hp2 HG02258.hp1 HG02258.hp2 HG02273.hp1 HG02273.hp2 HG02293.hp1 HG02293.hp2 HG02451.hp1 HG02451.hp2 HG02486.hp1 HG02486.hp2 HG02523.hp1 HG02523.hp2 HG02559.hp1 HG02559.hp2 HG02572.hp1 HG02572.hp2 HG02615.hp1 HG02615.hp2 HG02622.hp1 HG02622.hp2 HG02630.hp1 HG02630.hp2 HG02647.hp2 HG02683.hp1 HG02683.hp2 HG02698.hp1 HG02698.hp2 HG02717.hp1 HG02717.hp2 HG02723.hp1 HG02723.hp2 HG02735.hp1 HG02735.hp2 HG02738.hp1 HG02738.hp2 HG02809.hp1 HG02809.hp2 HG02886.hp1 HG02886.hp2 HG02895.hp1 HG02895.hp2 HG02897.hp1 HG02897.hp2 HG02965.hp1 HG02965.hp2 HG02970.hp1 HG02970.hp2 HG02976.hp1 HG02976.hp2 HG03098.hp1 HG03098.hp2 HG03130.hp1 HG03130.hp2 HG03139.hp1 HG03139.hp2 HG03195.hp1 HG03195.hp2 HG03209.hp1 HG03209.hp2 HG03225.hp1 HG03225.hp2 HG03453.hp1 HG03453.hp2 HG03471.hp1 HG03471.hp2 HG03486.hp2 HG03490.hp1 HG03490.hp2 HG03491.hp1 HG03491.hp2 HG03492.hp1 HG03492.hp2 HG03516.hp2 HG03540.hp1 HG03579.hp1 HG03579.hp2 HG03654.hp1 HG03654.hp2 HG03669.hp1 HG03669.hp2 HG03688.hp1 HG03688.hp2 HG03831.hp1 HG03831.hp2 HG03942.hp1 HG03942.hp2 HG04184.hp1 HG04184.hp2 HG04199.hp1 HG04199.hp2 HG04204.hp1 HG04204.hp2 HG04228.hp1 HG04228.hp2 HG06807.hp1 HG06807.hp2 NA18522.hp1 NA18522.hp2 NA18612.hp1 NA18612.hp2 NA18939.hp1 NA18939.hp2 NA18940.hp1 NA18940.hp2 NA18941.hp1 NA18941.hp2 NA18943.hp1 NA18943.hp2 NA18944.hp1 NA18944.hp2 NA18946.hp1 NA18946.hp2 NA18947.hp1 NA18947.hp2 NA18950.hp1 NA18950.hp2 NA18951.hp1 NA18951.hp2 NA18959.hp1 NA18959.hp2 NA18965.hp1 NA18965.hp2 NA18966.hp1 NA18966.hp2 NA18973.hp1 NA18973.hp2 NA18974.hp1 NA18974.hp2 NA18980.hp1 NA18980.hp2 NA18981.hp1 NA18981.hp2 NA18982.hp1 NA18982.hp2 NA18983.hp1 NA18983.hp2 NA18984.hp1 NA18984.hp2 NA18985.hp1 NA18985.hp2 NA18988.hp1 NA18988.hp2 NA18989.hp1 NA18989.hp2 NA18992.hp1 NA18992.hp2 NA18993.hp1 NA18993.hp2 NA18994.hp1 NA18994.hp2 NA18995.hp1 NA18995.hp2 NA18997.hp1 NA18997.hp2 NA18998.hp1 NA18998.hp2 NA18999.hp1 NA18999.hp2 NA19000.hp1 NA19000.hp2 NA19001.hp1 NA19001.hp2 NA19004.hp1 NA19004.hp2 NA19005.hp1 NA19005.hp2 NA19007.hp1 NA19007.hp2 NA19009.hp1 NA19009.hp2 NA19010.hp1 NA19010.hp2 NA19030.hp2 NA19043.hp1 NA19056.hp1 NA19056.hp2 NA19058.hp1 NA19058.hp2 NA19060.hp1 NA19060.hp2 NA19062.hp1 NA19062.hp2 NA19063.hp1 NA19063.hp2 NA19064.hp1 NA19064.hp2 NA19066.hp1 NA19066.hp2 NA19067.hp1 NA19067.hp2 NA19070.hp1 NA19070.hp2 NA19075.hp1 NA19075.hp2 NA19077.hp1 NA19077.hp2 NA19084.hp1 NA19084.hp2 NA19090.hp1 NA19090.hp2 NA19240.hp1 NA19240.hp2 NA20129.hp1 NA20129.hp2 NA20300.hp1 NA20300.hp2 NA20752.hp1 NA20752.hp2 NA20805.hp1 NA20805.hp2 NA20905.hp1 NA20905.hp2 NA21309.hp1 NA21309.hp2 homoSapiens_chm13v2.hp1	3_prime_UTR_variant	MODIFIER	c.819G>A c.819G>A	ATG9A	ENSG00000198925.12	transcript	ENST00000361242.9	protein_coding	16/16	819	chr2	219219628
chr2:219219670	C C	T T	1	a0001c0001t0013 a0001c0001t0013	2	NA18982.hp1 NA18983.hp1 NA18982.hp1 NA18983.hp1	3_prime_UTR_variant	MODIFIER	c.777G>A c.777G>A	ATG9A	ENSG00000198925.12	transcript	ENST00000361242.9	protein_coding	16/16	777	chr2	219219670
chr2:219219747	G G	A A	2	a0001c0001t0019 a0001c0002t0003 a0001c0001t0019 a0001c0002t0003	25	HG00597.hp1 HG00609.hp2 HG00621.hp1 others(22): Show HG00597.hp1 HG00609.hp2 HG00621.hp1 HG02015.hp1 HG02040.hp1 HG03669.hp1 HG03831.hp2 NA18940.hp2 NA18965.hp1 NA18966.hp1 NA18974.hp1 NA18982.hp2 NA18984.hp2 NA18988.hp2 NA18993.hp1 NA18993.hp2 NA18997.hp2 NA18998.hp1 NA19004.hp1 NA19007.hp2 NA19058.hp2 NA19062.hp2 NA19066.hp2 NA19084.hp1 NA19090.hp2	3_prime_UTR_variant	MODIFIER	c.700C>T c.700C>T	ATG9A	ENSG00000198925.12	transcript	ENST00000361242.9	protein_coding	16/16	700	chr2	219219747
chr2:219219749	C C	T T	1	a0001c0001t0017 a0001c0001t0017	1	HG02698.hp2 HG02698.hp2	3_prime_UTR_variant	MODIFIER	c.698G>A c.698G>A	ATG9A	ENSG00000198925.12	transcript	ENST00000361242.9	protein_coding	16/16	698	chr2	219219749
chr2:219219917	C C	G G	1	a0001c0001t0012 a0001c0001t0012	2	HG01168.hp2 HG01169.hp2 HG01168.hp2 HG01169.hp2	3_prime_UTR_variant	MODIFIER	c.530G>C c.530G>C	ATG9A	ENSG00000198925.12	transcript	ENST00000361242.9	protein_coding	16/16	530	chr2	219219917
chr2:219220128	G G	C C	2	a0001c0002t0009 a0008c0014t0009 a0001c0002t0009 a0008c0014t0009	6	HG02109.hp1 HG02145.hp1 HG02486.hp2 others(3): Show HG02109.hp1 HG02145.hp1 HG02486.hp2 HG02572.hp2 HG02717.hp1 HG02976.hp1	3_prime_UTR_variant	MODIFIER	c.319C>G c.319C>G	ATG9A	ENSG00000198925.12	transcript	ENST00000361242.9	protein_coding	16/16	319	chr2	219220128
chr2:219220142	G G	A A	2	a0001c0002t0003 a0001c0002t0007 a0001c0002t0003 a0001c0002t0007	35	HG00597.hp1 HG00609.hp2 HG00621.hp1 others(32): Show HG00597.hp1 HG00609.hp2 HG00621.hp1 HG02015.hp1 HG02040.hp1 HG02257.hp2 HG02258.hp1 HG02486.hp1 HG02809.hp1 HG03130.hp1 HG03195.hp2 HG03453.hp2 HG03540.hp1 HG03669.hp1 HG06807.hp2 NA18522.hp1 NA18940.hp2 NA18965.hp1 NA18966.hp1 NA18974.hp1 NA18982.hp2 NA18984.hp2 NA18988.hp2 NA18993.hp1 NA18993.hp2 NA18997.hp2 NA18998.hp1 NA19004.hp1 NA19007.hp2 NA19043.hp1 NA19058.hp2 NA19062.hp2 NA19066.hp2 NA19084.hp1 NA19090.hp2	3_prime_UTR_variant	MODIFIER	c.305C>T c.305C>T	ATG9A	ENSG00000198925.12	transcript	ENST00000361242.9	protein_coding	16/16	305	chr2	219220142
chr2:219220154	G G	A A	1	a0001c0016t0020 a0001c0016t0020	1	HG02886.hp2 HG02886.hp2	3_prime_UTR_variant	MODIFIER	c.293C>T c.293C>T	ATG9A	ENSG00000198925.12	transcript	ENST00000361242.9	protein_coding	16/16	293	chr2	219220154
chr2:219220180	G G	A A	25	a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 others(22): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 a0001c0001t0006 a0001c0001t0010 a0001c0001t0011 a0001c0001t0012 a0001c0001t0013 a0001c0001t0014 a0001c0001t0015 a0001c0001t0016 a0001c0001t0017 a0001c0001t0018 a0001c0001t0019 a0001c0004t0001 a0001c0010t0001 a0001c0013t0001 a0001c0015t0001 a0001c0016t0020 a0002c0003t0002 a0002c0017t0002 a0003c0008t0001 a0006c0009t0002 a0007c0011t0001 a0009c0012t0001	281	HG00099.hp1 HG00099.hp2 HG00140.hp1 others(278): Show HG00099.hp1 HG00099.hp2 HG00140.hp1 HG00140.hp2 HG00280.hp1 HG00280.hp2 HG00323.hp1 HG00323.hp2 HG00423.hp1 HG00423.hp2 HG00438.hp1 HG00438.hp2 HG00544.hp1 HG00544.hp2 HG00558.hp1 HG00558.hp2 HG00597.hp2 HG00609.hp1 HG00621.hp2 HG00639.hp1 HG00639.hp2 HG00642.hp1 HG00642.hp2 HG00673.hp1 HG00673.hp2 HG00733.hp1 HG00733.hp2 HG00735.hp1 HG00735.hp2 HG00738.hp1 HG00738.hp2 HG00741.hp1 HG00741.hp2 HG01069.hp1 HG01069.hp2 HG01070.hp1 HG01070.hp2 HG01071.hp1 HG01071.hp2 HG01074.hp1 HG01074.hp2 HG01081.hp1 HG01081.hp2 HG01099.hp1 HG01099.hp2 HG01106.hp1 HG01106.hp2 HG01109.hp1 HG01109.hp2 HG01167.hp1 HG01167.hp2 HG01168.hp1 HG01168.hp2 HG01169.hp1 HG01169.hp2 HG01175.hp2 HG01192.hp1 HG01192.hp2 HG01243.hp1 HG01255.hp1 HG01255.hp2 HG01256.hp1 HG01256.hp2 HG01257.hp1 HG01257.hp2 HG01258.hp1 HG01258.hp2 HG01261.hp1 HG01261.hp2 HG01346.hp1 HG01346.hp2 HG01358.hp1 HG01358.hp2 HG01433.hp1 HG01433.hp2 HG01496.hp1 HG01496.hp2 HG01515.hp1 HG01515.hp2 HG01517.hp1 HG01517.hp2 HG01884.hp2 HG01928.hp1 HG01928.hp2 HG01943.hp1 HG01943.hp2 HG01975.hp1 HG01975.hp2 HG01978.hp1 HG01978.hp2 HG01981.hp1 HG01981.hp2 HG01993.hp1 HG01993.hp2 HG02004.hp1 HG02004.hp2 HG02015.hp2 HG02040.hp2 HG02055.hp1 HG02055.hp2 HG02074.hp1 HG02074.hp2 HG02083.hp1 HG02083.hp2 HG02109.hp2 HG02129.hp1 HG02129.hp2 HG02135.hp1 HG02135.hp2 HG02148.hp1 HG02148.hp2 HG02155.hp1 HG02155.hp2 HG02257.hp1 HG02258.hp2 HG02273.hp1 HG02273.hp2 HG02293.hp1 HG02293.hp2 HG02451.hp1 HG02523.hp1 HG02523.hp2 HG02559.hp2 HG02572.hp1 HG02615.hp1 HG02615.hp2 HG02622.hp1 HG02622.hp2 HG02630.hp2 HG02647.hp2 HG02683.hp1 HG02683.hp2 HG02698.hp1 HG02698.hp2 HG02723.hp1 HG02723.hp2 HG02735.hp1 HG02735.hp2 HG02738.hp1 HG02738.hp2 HG02886.hp1 HG02886.hp2 HG02895.hp2 HG02897.hp1 HG02897.hp2 HG02965.hp1 HG02965.hp2 HG02970.hp2 HG02976.hp2 HG03098.hp1 HG03098.hp2 HG03130.hp2 HG03139.hp2 HG03195.hp1 HG03209.hp1 HG03209.hp2 HG03225.hp1 HG03225.hp2 HG03453.hp1 HG03471.hp2 HG03486.hp2 HG03490.hp1 HG03490.hp2 HG03491.hp1 HG03491.hp2 HG03492.hp1 HG03492.hp2 HG03516.hp2 HG03579.hp1 HG03579.hp2 HG03654.hp1 HG03654.hp2 HG03669.hp2 HG03688.hp1 HG03688.hp2 HG03831.hp1 HG03831.hp2 HG03942.hp1 HG03942.hp2 HG04184.hp1 HG04184.hp2 HG04199.hp1 HG04199.hp2 HG04204.hp1 HG04204.hp2 HG04228.hp1 HG04228.hp2 NA18612.hp1 NA18612.hp2 NA18939.hp1 NA18939.hp2 NA18940.hp1 NA18941.hp1 NA18941.hp2 NA18943.hp1 NA18943.hp2 NA18944.hp1 NA18944.hp2 NA18946.hp1 NA18946.hp2 NA18947.hp1 NA18947.hp2 NA18950.hp1 NA18950.hp2 NA18951.hp1 NA18951.hp2 NA18959.hp1 NA18959.hp2 NA18965.hp2 NA18966.hp2 NA18973.hp1 NA18973.hp2 NA18974.hp2 NA18980.hp1 NA18980.hp2 NA18981.hp1 NA18981.hp2 NA18982.hp1 NA18983.hp1 NA18983.hp2 NA18984.hp1 NA18985.hp1 NA18985.hp2 NA18988.hp1 NA18989.hp1 NA18989.hp2 NA18992.hp1 NA18992.hp2 NA18994.hp1 NA18994.hp2 NA18995.hp1 NA18995.hp2 NA18997.hp1 NA18998.hp2 NA18999.hp1 NA18999.hp2 NA19000.hp1 NA19000.hp2 NA19001.hp1 NA19001.hp2 NA19004.hp2 NA19005.hp1 NA19005.hp2 NA19007.hp1 NA19009.hp1 NA19009.hp2 NA19010.hp1 NA19010.hp2 NA19056.hp1 NA19056.hp2 NA19058.hp1 NA19060.hp1 NA19060.hp2 NA19062.hp1 NA19063.hp1 NA19063.hp2 NA19064.hp1 NA19064.hp2 NA19066.hp1 NA19067.hp1 NA19067.hp2 NA19070.hp1 NA19070.hp2 NA19075.hp1 NA19075.hp2 NA19077.hp1 NA19077.hp2 NA19084.hp2 NA19090.hp1 NA19240.hp1 NA20129.hp1 NA20129.hp2 NA20300.hp2 NA20752.hp1 NA20752.hp2 NA20805.hp1 NA20805.hp2 NA20905.hp1 NA20905.hp2 NA21309.hp2 homoSapiens_chm13v2.hp1	3_prime_UTR_variant	MODIFIER	c.267C>T c.267C>T	ATG9A	ENSG00000198925.12	transcript	ENST00000361242.9	protein_coding	16/16	267	chr2	219220180
chr2:219220216	C C	T T	1	a0001c0001t0004 a0001c0001t0004	19	HG00099.hp2 HG00280.hp2 HG00323.hp1 others(16): Show HG00099.hp2 HG00280.hp2 HG00323.hp1 HG00639.hp1 HG01069.hp1 HG01071.hp1 HG01074.hp2 HG01106.hp2 HG01109.hp2 HG01192.hp2 HG01243.hp1 HG01255.hp1 HG01256.hp2 HG01258.hp1 HG01346.hp1 HG02273.hp1 HG04184.hp1 HG04228.hp1 NA20752.hp2	3_prime_UTR_variant	MODIFIER	c.231G>A c.231G>A	ATG9A	ENSG00000198925.12	transcript	ENST00000361242.9	protein_coding	16/16	231	chr2	219220216
chr2:219220228	G G	A A	1	a0001c0001t0006 a0001c0001t0006	12	HG01070.hp2 HG01106.hp1 HG01192.hp1 others(9): Show HG01070.hp2 HG01106.hp1 HG01192.hp1 HG01496.hp1 HG01943.hp2 HG01975.hp1 HG01978.hp1 HG01981.hp2 HG02004.hp2 HG02148.hp1 HG02273.hp2 HG02293.hp2	3_prime_UTR_variant	MODIFIER	c.219C>T c.219C>T	ATG9A	ENSG00000198925.12	transcript	ENST00000361242.9	protein_coding	16/16	219	chr2	219220228
chr2:219220336	A A	G G	1	a0001c0001t0016 a0001c0001t0016	1	HG02135.hp1 HG02135.hp1	3_prime_UTR_variant	MODIFIER	c.111T>C c.111T>C	ATG9A	ENSG00000198925.12	transcript	ENST00000361242.9	protein_coding	16/16	111	chr2	219220336
chr2:219220387	C C	T T	1	a0001c0001t0011 a0001c0001t0011	2	NA18939.hp2 NA18999.hp2 NA18939.hp2 NA18999.hp2	3_prime_UTR_variant	MODIFIER	c.60G>A c.60G>A	ATG9A	ENSG00000198925.12	transcript	ENST00000361242.9	protein_coding	16/16	60	chr2	219220387
chr2:219228459	T T	A A	1	a0001c0001t0014 a0001c0001t0014	2	HG02257.hp1 NA19240.hp1 HG02257.hp1 NA19240.hp1	5_prime_UTR_variant	MODIFIER	c.-55A>T c.-55A>T	ATG9A	ENSG00000198925.12	transcript	ENST00000361242.9	protein_coding	2/16	435	chr2	219228459
chr2:219229576	C C	G G	1	a0001c0001t0015 a0001c0001t0015	1	HG00673.hp2 HG00673.hp2	5_prime_UTR_variant	MODIFIER	c.-123G>C c.-123G>C	ATG9A	ENSG00000198925.12	transcript	ENST00000361242.9	protein_coding	1/16	1552	chr2	219229576
chr2:219229585	G G	A A	5	a0001c0001t0002 a0001c0016t0020 a0002c0003t0002 others(2): Show a0001c0001t0002 a0001c0016t0020 a0002c0003t0002 a0002c0017t0002 a0006c0009t0002	41	HG00544.hp2 HG00558.hp2 HG00642.hp2 others(38): Show HG00544.hp2 HG00558.hp2 HG00642.hp2 HG00733.hp1 HG00735.hp2 HG01074.hp1 HG01167.hp1 HG01167.hp2 HG01169.hp1 HG01257.hp1 HG01258.hp2 HG01981.hp1 HG02109.hp2 HG02615.hp1 HG02622.hp1 HG02622.hp2 HG02630.hp2 HG02683.hp1 HG02735.hp1 HG02738.hp2 HG02886.hp2 HG02895.hp2 HG02897.hp2 HG02965.hp1 HG03098.hp2 HG03130.hp2 HG03209.hp1 HG03453.hp1 HG03486.hp2 HG03490.hp2 HG03492.hp1 HG03579.hp2 HG04204.hp2 NA18944.hp1 NA18973.hp1 NA18981.hp2 NA18994.hp2 NA19064.hp2 NA19077.hp1 NA20129.hp1 NA21309.hp2	5_prime_UTR_variant	MODIFIER	c.-132C>T c.-132C>T	ATG9A	ENSG00000198925.12	transcript	ENST00000361242.9	protein_coding	1/16	1561	chr2	219229585

chr:pos	ref	alt	# # of ghapid:genebody level	ghapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	genename	geneid	featuretype	featureid	genebody_biotype	rank	chr	pos
chr2:219220726	C C	T T	1	a0001c0001t0001g0058 a0001c0001t0001g0058	1	HG01358.hp1 HG01358.hp1	intron_variant	MODIFIER	c.2514+21G>A c.2514+21G>A	ATG9A	ENSG00000198925.12	transcript	ENST00000361242.9	protein_coding	15/15	chr2	219220726
chr2:219220915	G G	A A	1	a0001c0002t0003g0040 a0001c0002t0003g0040	1	HG00621.hp1 HG00621.hp1	intron_variant	MODIFIER	c.2369-23C>T c.2369-23C>T	ATG9A	ENSG00000198925.12	transcript	ENST00000361242.9	protein_coding	14/15	chr2	219220915
chr2:219221321	C C	T T	2	a0002c0003t0002g0034 a0002c0003t0002g0035 a0002c0003t0002g0034 a0002c0003t0002g0035	4	HG02683.hp1 HG03490.hp2 HG03492.hp1 others(1): Show HG02683.hp1 HG03490.hp2 HG03492.hp1 HG04204.hp2	intron_variant	MODIFIER	c.2146-19G>A c.2146-19G>A	ATG9A	ENSG00000198925.12	transcript	ENST00000361242.9	protein_coding	13/15	chr2	219221321
chr2:219221456	C C	T T	2	a0001c0001t0002g0017 a0001c0001t0002g0075 a0001c0001t0002g0017 a0001c0001t0002g0075	5	HG02109.hp2 HG02615.hp1 HG02622.hp1 others(2): Show HG02109.hp2 HG02615.hp1 HG02622.hp1 HG02895.hp2 HG02897.hp2	intron_variant	MODIFIER	c.2146-154G>A c.2146-154G>A	ATG9A	ENSG00000198925.12	transcript	ENST00000361242.9	protein_coding	13/15	chr2	219221456
chr2:219221558	C C	T T	47	a0001c0001t0001g0001 a0001c0001t0001g0009 a0001c0001t0001g0012 others(44): Show a0001c0001t0001g0001 a0001c0001t0001g0009 a0001c0001t0001g0012 a0001c0001t0001g0015 a0001c0001t0001g0016 a0001c0001t0001g0019 a0001c0001t0001g0028 a0001c0001t0001g0031 a0001c0001t0001g0032 a0001c0001t0001g0038 a0001c0001t0001g0039 a0001c0001t0001g0046 a0001c0001t0001g0047 a0001c0001t0001g0048 a0001c0001t0001g0049 a0001c0001t0001g0050 a0001c0001t0001g0057 a0001c0001t0001g0058 a0001c0001t0001g0066 a0001c0001t0001g0067 a0001c0001t0001g0068 a0001c0001t0001g0069 a0001c0001t0001g0071 a0001c0001t0001g0073 a0001c0001t0004g0004 a0001c0001t0004g0054 a0001c0001t0004g0062 a0001c0001t0004g0064 a0001c0001t0006g0005 a0001c0001t0010g0014 a0001c0001t0011g0029 a0001c0001t0012g0033 a0001c0001t0013g0060 a0001c0001t0013g0065 a0001c0001t0015g0037 a0001c0001t0016g0053 a0001c0001t0017g0059 a0001c0001t0018g0056 a0001c0001t0019g0061 a0001c0004t0001g0007 a0001c0004t0001g0021 a0001c0010t0001g0070 a0001c0013t0001g0055 a0001c0015t0001g0063 a0003c0008t0001g0030 a0007c0011t0001g0051 a0009c0012t0001g0052	235	HG00099.hp1 HG00099.hp2 HG00140.hp1 others(232): Show HG00099.hp1 HG00099.hp2 HG00140.hp1 HG00140.hp2 HG00280.hp1 HG00280.hp2 HG00323.hp1 HG00323.hp2 HG00423.hp1 HG00423.hp2 HG00438.hp1 HG00438.hp2 HG00544.hp1 HG00558.hp1 HG00597.hp2 HG00609.hp1 HG00621.hp2 HG00639.hp1 HG00639.hp2 HG00642.hp1 HG00673.hp1 HG00673.hp2 HG00733.hp2 HG00735.hp1 HG00738.hp1 HG00738.hp2 HG00741.hp1 HG00741.hp2 HG01069.hp1 HG01069.hp2 HG01070.hp1 HG01070.hp2 HG01071.hp1 HG01071.hp2 HG01074.hp2 HG01081.hp1 HG01081.hp2 HG01099.hp1 HG01099.hp2 HG01106.hp1 HG01106.hp2 HG01109.hp1 HG01109.hp2 HG01168.hp1 HG01168.hp2 HG01169.hp2 HG01175.hp2 HG01192.hp1 HG01192.hp2 HG01243.hp1 HG01255.hp1 HG01255.hp2 HG01256.hp1 HG01256.hp2 HG01257.hp2 HG01258.hp1 HG01261.hp1 HG01261.hp2 HG01346.hp1 HG01346.hp2 HG01358.hp1 HG01358.hp2 HG01433.hp1 HG01433.hp2 HG01496.hp1 HG01496.hp2 HG01515.hp1 HG01515.hp2 HG01517.hp1 HG01517.hp2 HG01928.hp1 HG01928.hp2 HG01943.hp1 HG01943.hp2 HG01975.hp1 HG01975.hp2 HG01978.hp1 HG01978.hp2 HG01981.hp2 HG01993.hp1 HG01993.hp2 HG02004.hp1 HG02004.hp2 HG02015.hp2 HG02040.hp2 HG02055.hp1 HG02055.hp2 HG02074.hp1 HG02074.hp2 HG02083.hp1 HG02083.hp2 HG02129.hp1 HG02129.hp2 HG02135.hp1 HG02135.hp2 HG02148.hp1 HG02148.hp2 HG02155.hp1 HG02155.hp2 HG02258.hp2 HG02273.hp1 HG02273.hp2 HG02293.hp1 HG02293.hp2 HG02523.hp1 HG02523.hp2 HG02559.hp2 HG02572.hp1 HG02615.hp2 HG02647.hp2 HG02683.hp2 HG02698.hp1 HG02698.hp2 HG02723.hp1 HG02723.hp2 HG02735.hp2 HG02738.hp1 HG02886.hp1 HG02897.hp1 HG02965.hp2 HG02970.hp2 HG02976.hp2 HG03098.hp1 HG03139.hp2 HG03195.hp1 HG03209.hp2 HG03225.hp1 HG03225.hp2 HG03471.hp2 HG03490.hp1 HG03491.hp1 HG03491.hp2 HG03492.hp2 HG03516.hp2 HG03579.hp1 HG03654.hp1 HG03654.hp2 HG03669.hp2 HG03688.hp1 HG03688.hp2 HG03831.hp1 HG03831.hp2 HG03942.hp1 HG03942.hp2 HG04184.hp1 HG04184.hp2 HG04199.hp1 HG04199.hp2 HG04204.hp1 HG04228.hp1 HG04228.hp2 NA18612.hp1 NA18612.hp2 NA18939.hp1 NA18939.hp2 NA18940.hp1 NA18941.hp1 NA18941.hp2 NA18943.hp1 NA18943.hp2 NA18944.hp2 NA18946.hp1 NA18946.hp2 NA18947.hp1 NA18947.hp2 NA18950.hp1 NA18950.hp2 NA18951.hp1 NA18951.hp2 NA18959.hp1 NA18959.hp2 NA18965.hp2 NA18966.hp2 NA18973.hp2 NA18974.hp2 NA18980.hp1 NA18980.hp2 NA18981.hp1 NA18982.hp1 NA18983.hp1 NA18983.hp2 NA18984.hp1 NA18985.hp1 NA18985.hp2 NA18988.hp1 NA18989.hp1 NA18989.hp2 NA18992.hp1 NA18992.hp2 NA18994.hp1 NA18995.hp1 NA18995.hp2 NA18997.hp1 NA18998.hp2 NA18999.hp1 NA18999.hp2 NA19000.hp1 NA19000.hp2 NA19001.hp1 NA19001.hp2 NA19004.hp2 NA19005.hp1 NA19005.hp2 NA19007.hp1 NA19009.hp1 NA19009.hp2 NA19010.hp1 NA19010.hp2 NA19056.hp1 NA19056.hp2 NA19058.hp1 NA19060.hp1 NA19060.hp2 NA19062.hp1 NA19063.hp1 NA19063.hp2 NA19064.hp1 NA19066.hp1 NA19067.hp1 NA19067.hp2 NA19070.hp1 NA19070.hp2 NA19075.hp1 NA19075.hp2 NA19077.hp2 NA19084.hp2 NA19090.hp1 NA20300.hp2 NA20752.hp1 NA20752.hp2 NA20805.hp1 NA20805.hp2 NA20905.hp1 NA20905.hp2 homoSapiens_chm13v2.hp1	intron_variant	MODIFIER	c.2146-256G>A c.2146-256G>A	ATG9A	ENSG00000198925.12	transcript	ENST00000361242.9	protein_coding	13/15	chr2	219221558
chr2:219221695	A A	G G	1	a0001c0001t0001g0057 a0001c0001t0001g0057	1	HG02615.hp2 HG02615.hp2	intron_variant	MODIFIER	c.2145+355T>C c.2145+355T>C	ATG9A	ENSG00000198925.12	transcript	ENST00000361242.9	protein_coding	13/15	chr2	219221695
chr2:219221819	A A	G G	15	a0001c0001t0001g0069 a0001c0001t0001g0073 a0001c0001t0002g0013 others(12): Show a0001c0001t0001g0069 a0001c0001t0001g0073 a0001c0001t0002g0013 a0001c0001t0002g0017 a0001c0001t0002g0075 a0001c0001t0002g0077 a0001c0001t0002g0078 a0001c0001t0018g0056 a0001c0016t0020g0074 a0002c0003t0002g0003 a0002c0003t0002g0020 a0002c0003t0002g0034 a0002c0003t0002g0035 a0002c0017t0002g0076 a0006c0009t0002g0036	44	HG00544.hp2 HG00558.hp2 HG00642.hp2 others(41): Show HG00544.hp2 HG00558.hp2 HG00642.hp2 HG00733.hp1 HG00735.hp2 HG00738.hp2 HG01074.hp1 HG01167.hp1 HG01167.hp2 HG01169.hp1 HG01257.hp1 HG01258.hp2 HG01433.hp1 HG01981.hp1 HG01993.hp1 HG02109.hp2 HG02615.hp1 HG02622.hp1 HG02622.hp2 HG02630.hp2 HG02683.hp1 HG02735.hp1 HG02738.hp2 HG02886.hp2 HG02895.hp2 HG02897.hp2 HG02965.hp1 HG03098.hp2 HG03130.hp2 HG03209.hp1 HG03453.hp1 HG03486.hp2 HG03490.hp2 HG03492.hp1 HG03579.hp2 HG04204.hp2 NA18944.hp1 NA18973.hp1 NA18981.hp2 NA18994.hp2 NA19064.hp2 NA19077.hp1 NA20129.hp1 NA21309.hp2	intron_variant	MODIFIER	c.2145+231T>C c.2145+231T>C	ATG9A	ENSG00000198925.12	transcript	ENST00000361242.9	protein_coding	13/15	chr2	219221819
chr2:219221841	G G	A A	2	a0001c0001t0001g0024 a0001c0001t0001g0043 a0001c0001t0001g0024 a0001c0001t0001g0043	3	HG01884.hp2 HG02451.hp1 NA20129.hp2 HG01884.hp2 HG02451.hp1 NA20129.hp2	intron_variant	MODIFIER	c.2145+209C>T c.2145+209C>T	ATG9A	ENSG00000198925.12	transcript	ENST00000361242.9	protein_coding	13/15	chr2	219221841
chr2:219221915	G G	A A	1	a0001c0001t0004g0062 a0001c0001t0004g0062	1	HG01255.hp1 HG01255.hp1	intron_variant	MODIFIER	c.2145+135C>T c.2145+135C>T	ATG9A	ENSG00000198925.12	transcript	ENST00000361242.9	protein_coding	13/15	chr2	219221915
chr2:219222261	G G	A A	1	a0001c0001t0001g0024 a0001c0001t0001g0024	2	HG01884.hp2 HG02451.hp1 HG01884.hp2 HG02451.hp1	intron_variant	MODIFIER	c.2027+11C>T c.2027+11C>T	ATG9A	ENSG00000198925.12	transcript	ENST00000361242.9	protein_coding	12/15	chr2	219222261
chr2:219222632	A A	C C	12	a0001c0001t0002g0013 a0001c0001t0002g0017 a0001c0001t0002g0075 others(9): Show a0001c0001t0002g0013 a0001c0001t0002g0017 a0001c0001t0002g0075 a0001c0001t0002g0077 a0001c0001t0002g0078 a0001c0016t0020g0074 a0002c0003t0002g0003 a0002c0003t0002g0020 a0002c0003t0002g0034 a0002c0003t0002g0035 a0002c0017t0002g0076 a0006c0009t0002g0036	41	HG00544.hp2 HG00558.hp2 HG00642.hp2 others(38): Show HG00544.hp2 HG00558.hp2 HG00642.hp2 HG00733.hp1 HG00735.hp2 HG01074.hp1 HG01167.hp1 HG01167.hp2 HG01169.hp1 HG01257.hp1 HG01258.hp2 HG01981.hp1 HG02109.hp2 HG02615.hp1 HG02622.hp1 HG02622.hp2 HG02630.hp2 HG02683.hp1 HG02735.hp1 HG02738.hp2 HG02886.hp2 HG02895.hp2 HG02897.hp2 HG02965.hp1 HG03098.hp2 HG03130.hp2 HG03209.hp1 HG03453.hp1 HG03486.hp2 HG03490.hp2 HG03492.hp1 HG03579.hp2 HG04204.hp2 NA18944.hp1 NA18973.hp1 NA18981.hp2 NA18994.hp2 NA19064.hp2 NA19077.hp1 NA20129.hp1 NA21309.hp2	intron_variant	MODIFIER	c.1848+13T>G c.1848+13T>G	ATG9A	ENSG00000198925.12	transcript	ENST00000361242.9	protein_coding	11/15	chr2	219222632
chr2:219223074	A A	C C	12	a0001c0001t0002g0013 a0001c0001t0002g0017 a0001c0001t0002g0075 others(9): Show a0001c0001t0002g0013 a0001c0001t0002g0017 a0001c0001t0002g0075 a0001c0001t0002g0077 a0001c0001t0002g0078 a0001c0016t0020g0074 a0002c0003t0002g0003 a0002c0003t0002g0020 a0002c0003t0002g0034 a0002c0003t0002g0035 a0002c0017t0002g0076 a0006c0009t0002g0036	41	HG00544.hp2 HG00558.hp2 HG00642.hp2 others(38): Show HG00544.hp2 HG00558.hp2 HG00642.hp2 HG00733.hp1 HG00735.hp2 HG01074.hp1 HG01167.hp1 HG01167.hp2 HG01169.hp1 HG01257.hp1 HG01258.hp2 HG01981.hp1 HG02109.hp2 HG02615.hp1 HG02622.hp1 HG02622.hp2 HG02630.hp2 HG02683.hp1 HG02735.hp1 HG02738.hp2 HG02886.hp2 HG02895.hp2 HG02897.hp2 HG02965.hp1 HG03098.hp2 HG03130.hp2 HG03209.hp1 HG03453.hp1 HG03486.hp2 HG03490.hp2 HG03492.hp1 HG03579.hp2 HG04204.hp2 NA18944.hp1 NA18973.hp1 NA18981.hp2 NA18994.hp2 NA19064.hp2 NA19077.hp1 NA20129.hp1 NA21309.hp2	intron_variant	MODIFIER	c.1600-181T>G c.1600-181T>G	ATG9A	ENSG00000198925.12	transcript	ENST00000361242.9	protein_coding	10/15	chr2	219223074
chr2:219223087	C C	CT CT	11	a0001c0001t0001g0012 a0001c0001t0001g0066 a0001c0001t0002g0013 others(8): Show a0001c0001t0001g0012 a0001c0001t0001g0066 a0001c0001t0002g0013 a0001c0001t0002g0017 a0001c0001t0002g0075 a0001c0001t0002g0077 a0001c0001t0004g0054 a0001c0001t0016g0053 a0001c0002t0008g0042 a0002c0003t0002g0034 a0008c0014t0009g0045	23	HG00544.hp1 HG01243.hp1 HG02055.hp2 others(20): Show HG00544.hp1 HG01243.hp1 HG02055.hp2 HG02109.hp2 HG02135.hp1 HG02572.hp2 HG02615.hp1 HG02622.hp1 HG02630.hp2 HG02683.hp1 HG02895.hp2 HG02897.hp2 HG03130.hp2 HG03209.hp1 HG03209.hp2 HG03453.hp1 HG03579.hp1 HG03579.hp2 HG04204.hp2 NA18994.hp1 NA19010.hp1 NA19030.hp1 NA20129.hp1	intron_variant	MODIFIER	c.1600-195dupA c.1600-195dupA	ATG9A	ENSG00000198925.12	transcript	ENST00000361242.9	protein_coding	10/15	chr2	219223087
chr2:219223087	CT CT	C C	10	a0001c0001t0001g0047 a0001c0001t0001g0050 a0001c0001t0004g0064 others(7): Show a0001c0001t0001g0047 a0001c0001t0001g0050 a0001c0001t0004g0064 a0001c0001t0013g0065 a0001c0002t0003g0002 a0001c0002t0003g0040 a0001c0002t0003g0072 a0001c0002t0007g0006 a0001c0002t0007g0041 a0001c0005t0005g0010	44	HG00597.hp1 HG00609.hp2 HG00621.hp1 others(41): Show HG00597.hp1 HG00609.hp2 HG00621.hp1 HG01074.hp2 HG01515.hp2 HG02015.hp1 HG02040.hp1 HG02257.hp2 HG02258.hp1 HG02486.hp1 HG02559.hp1 HG02809.hp1 HG02809.hp2 HG03130.hp1 HG03139.hp1 HG03195.hp2 HG03453.hp2 HG03540.hp1 HG03669.hp1 HG06807.hp2 NA18522.hp1 NA18522.hp2 NA18940.hp2 NA18965.hp1 NA18966.hp1 NA18974.hp1 NA18982.hp1 NA18982.hp2 NA18984.hp2 NA18988.hp2 NA18993.hp1 NA18993.hp2 NA18997.hp2 NA18998.hp1 NA19004.hp1 NA19007.hp2 NA19030.hp2 NA19043.hp1 NA19056.hp2 NA19058.hp2 NA19062.hp2 NA19066.hp2 NA19084.hp1 NA19090.hp2	intron_variant	MODIFIER	c.1600-195delA c.1600-195delA	ATG9A	ENSG00000198925.12	transcript	ENST00000361242.9	protein_coding	10/15	chr2	219223087
chr2:219223119	G G	C C	1	a0001c0001t0001g0066 a0001c0001t0001g0066	1	HG02055.hp2 HG02055.hp2	intron_variant	MODIFIER	c.1600-226C>G c.1600-226C>G	ATG9A	ENSG00000198925.12	transcript	ENST00000361242.9	protein_coding	10/15	chr2	219223119
chr2:219223133	G G	A A	1	a0002c0003t0002g0020 a0002c0003t0002g0020	3	HG02622.hp2 HG02965.hp1 HG03486.hp2 HG02622.hp2 HG02965.hp1 HG03486.hp2	intron_variant	MODIFIER	c.1600-240C>T c.1600-240C>T	ATG9A	ENSG00000198925.12	transcript	ENST00000361242.9	protein_coding	10/15	chr2	219223133
chr2:219223149	G G	A A	1	a0001c0001t0001g0015 a0001c0001t0001g0015	4	NA18947.hp1 NA19005.hp2 NA19067.hp1 others(1): Show NA18947.hp1 NA19005.hp2 NA19067.hp1 NA19075.hp1	intron_variant	MODIFIER	c.1600-256C>T c.1600-256C>T	ATG9A	ENSG00000198925.12	transcript	ENST00000361242.9	protein_coding	10/15	chr2	219223149
chr2:219223343	C C	A A	1	a0001c0001t0001g0067 a0001c0001t0001g0067	1	NA18612.hp1 NA18612.hp1	intron_variant	MODIFIER	c.1599+242G>T c.1599+242G>T	ATG9A	ENSG00000198925.12	transcript	ENST00000361242.9	protein_coding	10/15	chr2	219223343
chr2:219223526	A A	G G	46	a0001c0001t0001g0001 a0001c0001t0001g0009 a0001c0001t0001g0012 others(43): Show a0001c0001t0001g0001 a0001c0001t0001g0009 a0001c0001t0001g0012 a0001c0001t0001g0015 a0001c0001t0001g0016 a0001c0001t0001g0019 a0001c0001t0001g0028 a0001c0001t0001g0031 a0001c0001t0001g0032 a0001c0001t0001g0039 a0001c0001t0001g0046 a0001c0001t0001g0047 a0001c0001t0001g0048 a0001c0001t0001g0049 a0001c0001t0001g0050 a0001c0001t0001g0057 a0001c0001t0001g0058 a0001c0001t0001g0066 a0001c0001t0001g0067 a0001c0001t0001g0068 a0001c0001t0001g0069 a0001c0001t0001g0071 a0001c0001t0001g0073 a0001c0001t0004g0004 a0001c0001t0004g0054 a0001c0001t0004g0062 a0001c0001t0004g0064 a0001c0001t0006g0005 a0001c0001t0010g0014 a0001c0001t0011g0029 a0001c0001t0012g0033 a0001c0001t0013g0060 a0001c0001t0013g0065 a0001c0001t0015g0037 a0001c0001t0016g0053 a0001c0001t0017g0059 a0001c0001t0018g0056 a0001c0001t0019g0061 a0001c0004t0001g0007 a0001c0004t0001g0021 a0001c0010t0001g0070 a0001c0013t0001g0055 a0001c0015t0001g0063 a0003c0008t0001g0030 a0007c0011t0001g0051 a0009c0012t0001g0052	234	HG00099.hp1 HG00099.hp2 HG00140.hp1 others(231): Show HG00099.hp1 HG00099.hp2 HG00140.hp1 HG00140.hp2 HG00280.hp1 HG00280.hp2 HG00323.hp1 HG00323.hp2 HG00423.hp1 HG00423.hp2 HG00438.hp1 HG00438.hp2 HG00544.hp1 HG00558.hp1 HG00597.hp2 HG00609.hp1 HG00621.hp2 HG00639.hp1 HG00639.hp2 HG00642.hp1 HG00673.hp1 HG00673.hp2 HG00733.hp2 HG00735.hp1 HG00738.hp1 HG00738.hp2 HG00741.hp1 HG00741.hp2 HG01069.hp1 HG01069.hp2 HG01070.hp1 HG01070.hp2 HG01071.hp1 HG01071.hp2 HG01074.hp2 HG01081.hp1 HG01081.hp2 HG01099.hp1 HG01099.hp2 HG01106.hp1 HG01106.hp2 HG01109.hp1 HG01109.hp2 HG01168.hp1 HG01168.hp2 HG01169.hp2 HG01175.hp2 HG01192.hp1 HG01192.hp2 HG01243.hp1 HG01255.hp1 HG01255.hp2 HG01256.hp1 HG01256.hp2 HG01257.hp2 HG01258.hp1 HG01261.hp1 HG01261.hp2 HG01346.hp1 HG01346.hp2 HG01358.hp1 HG01358.hp2 HG01433.hp1 HG01433.hp2 HG01496.hp1 HG01496.hp2 HG01515.hp1 HG01515.hp2 HG01517.hp1 HG01517.hp2 HG01928.hp1 HG01928.hp2 HG01943.hp1 HG01943.hp2 HG01975.hp1 HG01975.hp2 HG01978.hp1 HG01978.hp2 HG01981.hp2 HG01993.hp1 HG01993.hp2 HG02004.hp1 HG02004.hp2 HG02015.hp2 HG02040.hp2 HG02055.hp1 HG02055.hp2 HG02074.hp1 HG02074.hp2 HG02083.hp1 HG02083.hp2 HG02129.hp1 HG02129.hp2 HG02135.hp1 HG02135.hp2 HG02148.hp1 HG02148.hp2 HG02155.hp1 HG02155.hp2 HG02258.hp2 HG02273.hp1 HG02273.hp2 HG02293.hp1 HG02293.hp2 HG02523.hp1 HG02523.hp2 HG02559.hp2 HG02572.hp1 HG02615.hp2 HG02647.hp2 HG02683.hp2 HG02698.hp1 HG02698.hp2 HG02723.hp1 HG02723.hp2 HG02735.hp2 HG02738.hp1 HG02886.hp1 HG02897.hp1 HG02965.hp2 HG02970.hp2 HG03098.hp1 HG03139.hp2 HG03195.hp1 HG03209.hp2 HG03225.hp1 HG03225.hp2 HG03471.hp2 HG03490.hp1 HG03491.hp1 HG03491.hp2 HG03492.hp2 HG03516.hp2 HG03579.hp1 HG03654.hp1 HG03654.hp2 HG03669.hp2 HG03688.hp1 HG03688.hp2 HG03831.hp1 HG03831.hp2 HG03942.hp1 HG03942.hp2 HG04184.hp1 HG04184.hp2 HG04199.hp1 HG04199.hp2 HG04204.hp1 HG04228.hp1 HG04228.hp2 NA18612.hp1 NA18612.hp2 NA18939.hp1 NA18939.hp2 NA18940.hp1 NA18941.hp1 NA18941.hp2 NA18943.hp1 NA18943.hp2 NA18944.hp2 NA18946.hp1 NA18946.hp2 NA18947.hp1 NA18947.hp2 NA18950.hp1 NA18950.hp2 NA18951.hp1 NA18951.hp2 NA18959.hp1 NA18959.hp2 NA18965.hp2 NA18966.hp2 NA18973.hp2 NA18974.hp2 NA18980.hp1 NA18980.hp2 NA18981.hp1 NA18982.hp1 NA18983.hp1 NA18983.hp2 NA18984.hp1 NA18985.hp1 NA18985.hp2 NA18988.hp1 NA18989.hp1 NA18989.hp2 NA18992.hp1 NA18992.hp2 NA18994.hp1 NA18995.hp1 NA18995.hp2 NA18997.hp1 NA18998.hp2 NA18999.hp1 NA18999.hp2 NA19000.hp1 NA19000.hp2 NA19001.hp1 NA19001.hp2 NA19004.hp2 NA19005.hp1 NA19005.hp2 NA19007.hp1 NA19009.hp1 NA19009.hp2 NA19010.hp1 NA19010.hp2 NA19056.hp1 NA19056.hp2 NA19058.hp1 NA19060.hp1 NA19060.hp2 NA19062.hp1 NA19063.hp1 NA19063.hp2 NA19064.hp1 NA19066.hp1 NA19067.hp1 NA19067.hp2 NA19070.hp1 NA19070.hp2 NA19075.hp1 NA19075.hp2 NA19077.hp2 NA19084.hp2 NA19090.hp1 NA20300.hp2 NA20752.hp1 NA20752.hp2 NA20805.hp1 NA20805.hp2 NA20905.hp1 NA20905.hp2 homoSapiens_chm13v2.hp1	intron_variant	MODIFIER	c.1599+59T>C c.1599+59T>C	ATG9A	ENSG00000198925.12	transcript	ENST00000361242.9	protein_coding	10/15	chr2	219223526
chr2:219223786	C C	A A	3	a0001c0001t0001g0009 a0001c0001t0001g0015 a0003c0008t0001g0030 a0001c0001t0001g0009 a0001c0001t0001g0015 a0003c0008t0001g0030	14	HG00423.hp1 HG00735.hp1 HG01993.hp2 others(11): Show HG00423.hp1 HG00735.hp1 HG01993.hp2 NA18946.hp2 NA18947.hp1 NA18965.hp2 NA18985.hp2 NA18989.hp2 NA19001.hp2 NA19005.hp2 NA19067.hp1 NA19070.hp1 NA19075.hp1 NA19075.hp2	intron_variant	MODIFIER	c.1420-22G>T c.1420-22G>T	ATG9A	ENSG00000198925.12	transcript	ENST00000361242.9	protein_coding	9/15	chr2	219223786
chr2:219223799	G G	A A	1	a0001c0001t0001g0068 a0001c0001t0001g0068	1	HG02683.hp2 HG02683.hp2	intron_variant	MODIFIER	c.1420-35C>T c.1420-35C>T	ATG9A	ENSG00000198925.12	transcript	ENST00000361242.9	protein_coding	9/15	chr2	219223799
chr2:219224027	T T	C C	1	a0001c0001t0001g0031 a0001c0001t0001g0031	2	HG02723.hp2 HG02970.hp2 HG02723.hp2 HG02970.hp2	splice_region_variant&intron_variant	LOW	c.1266-5A>G c.1266-5A>G	ATG9A	ENSG00000198925.12	transcript	ENST00000361242.9	protein_coding	8/15	chr2	219224027
chr2:219224075	C C	T T	1	a0001c0001t0001g0028 a0001c0001t0001g0028	2	NA18951.hp2 NA18959.hp1 NA18951.hp2 NA18959.hp1	intron_variant	MODIFIER	c.1265+31G>A c.1265+31G>A	ATG9A	ENSG00000198925.12	transcript	ENST00000361242.9	protein_coding	8/15	chr2	219224075
chr2:219224868	T T	TC TC	1	a0001c0001t0001g0016 a0001c0001t0001g0016	4	HG00733.hp2 HG01069.hp2 HG01081.hp1 others(1): Show HG00733.hp2 HG01069.hp2 HG01081.hp1 NA20300.hp2	intron_variant	MODIFIER	c.517-15_517-14insG c.517-15_517-14insG	ATG9A	ENSG00000198925.12	transcript	ENST00000361242.9	protein_coding	7/15	chr2	219224868
chr2:219224868	T T	TG TG	45	a0001c0001t0001g0001 a0001c0001t0001g0009 a0001c0001t0001g0012 others(42): Show a0001c0001t0001g0001 a0001c0001t0001g0009 a0001c0001t0001g0012 a0001c0001t0001g0015 a0001c0001t0001g0019 a0001c0001t0001g0028 a0001c0001t0001g0031 a0001c0001t0001g0032 a0001c0001t0001g0039 a0001c0001t0001g0046 a0001c0001t0001g0047 a0001c0001t0001g0048 a0001c0001t0001g0049 a0001c0001t0001g0050 a0001c0001t0001g0057 a0001c0001t0001g0058 a0001c0001t0001g0066 a0001c0001t0001g0067 a0001c0001t0001g0068 a0001c0001t0001g0069 a0001c0001t0001g0071 a0001c0001t0001g0073 a0001c0001t0004g0004 a0001c0001t0004g0054 a0001c0001t0004g0062 a0001c0001t0004g0064 a0001c0001t0006g0005 a0001c0001t0010g0014 a0001c0001t0011g0029 a0001c0001t0012g0033 a0001c0001t0013g0060 a0001c0001t0013g0065 a0001c0001t0015g0037 a0001c0001t0016g0053 a0001c0001t0017g0059 a0001c0001t0018g0056 a0001c0001t0019g0061 a0001c0004t0001g0007 a0001c0004t0001g0021 a0001c0010t0001g0070 a0001c0013t0001g0055 a0001c0015t0001g0063 a0003c0008t0001g0030 a0007c0011t0001g0051 a0009c0012t0001g0052	230	HG00099.hp1 HG00099.hp2 HG00140.hp1 others(227): Show HG00099.hp1 HG00099.hp2 HG00140.hp1 HG00140.hp2 HG00280.hp1 HG00280.hp2 HG00323.hp1 HG00323.hp2 HG00423.hp1 HG00423.hp2 HG00438.hp1 HG00438.hp2 HG00544.hp1 HG00558.hp1 HG00597.hp2 HG00609.hp1 HG00621.hp2 HG00639.hp1 HG00639.hp2 HG00642.hp1 HG00673.hp1 HG00673.hp2 HG00735.hp1 HG00738.hp1 HG00738.hp2 HG00741.hp1 HG00741.hp2 HG01069.hp1 HG01070.hp1 HG01070.hp2 HG01071.hp1 HG01071.hp2 HG01074.hp2 HG01081.hp2 HG01099.hp1 HG01099.hp2 HG01106.hp1 HG01106.hp2 HG01109.hp1 HG01109.hp2 HG01168.hp1 HG01168.hp2 HG01169.hp2 HG01175.hp2 HG01192.hp1 HG01192.hp2 HG01243.hp1 HG01255.hp1 HG01255.hp2 HG01256.hp1 HG01256.hp2 HG01257.hp2 HG01258.hp1 HG01261.hp1 HG01261.hp2 HG01346.hp1 HG01346.hp2 HG01358.hp1 HG01358.hp2 HG01433.hp1 HG01433.hp2 HG01496.hp1 HG01496.hp2 HG01515.hp1 HG01515.hp2 HG01517.hp1 HG01517.hp2 HG01928.hp1 HG01928.hp2 HG01943.hp1 HG01943.hp2 HG01975.hp1 HG01975.hp2 HG01978.hp1 HG01978.hp2 HG01981.hp2 HG01993.hp1 HG01993.hp2 HG02004.hp1 HG02004.hp2 HG02015.hp2 HG02040.hp2 HG02055.hp1 HG02055.hp2 HG02074.hp1 HG02074.hp2 HG02083.hp1 HG02083.hp2 HG02129.hp1 HG02129.hp2 HG02135.hp1 HG02135.hp2 HG02148.hp1 HG02148.hp2 HG02155.hp1 HG02155.hp2 HG02258.hp2 HG02273.hp1 HG02273.hp2 HG02293.hp1 HG02293.hp2 HG02523.hp1 HG02523.hp2 HG02559.hp2 HG02572.hp1 HG02615.hp2 HG02647.hp2 HG02683.hp2 HG02698.hp1 HG02698.hp2 HG02723.hp1 HG02723.hp2 HG02735.hp2 HG02738.hp1 HG02886.hp1 HG02897.hp1 HG02965.hp2 HG02970.hp2 HG03098.hp1 HG03139.hp2 HG03195.hp1 HG03209.hp2 HG03225.hp1 HG03225.hp2 HG03471.hp2 HG03490.hp1 HG03491.hp1 HG03491.hp2 HG03492.hp2 HG03516.hp2 HG03579.hp1 HG03654.hp1 HG03654.hp2 HG03669.hp2 HG03688.hp1 HG03688.hp2 HG03831.hp1 HG03831.hp2 HG03942.hp1 HG03942.hp2 HG04184.hp1 HG04184.hp2 HG04199.hp1 HG04199.hp2 HG04204.hp1 HG04228.hp1 HG04228.hp2 NA18612.hp1 NA18612.hp2 NA18939.hp1 NA18939.hp2 NA18940.hp1 NA18941.hp1 NA18941.hp2 NA18943.hp1 NA18943.hp2 NA18944.hp2 NA18946.hp1 NA18946.hp2 NA18947.hp1 NA18947.hp2 NA18950.hp1 NA18950.hp2 NA18951.hp1 NA18951.hp2 NA18959.hp1 NA18959.hp2 NA18965.hp2 NA18966.hp2 NA18973.hp2 NA18974.hp2 NA18980.hp1 NA18980.hp2 NA18981.hp1 NA18982.hp1 NA18983.hp1 NA18983.hp2 NA18984.hp1 NA18985.hp1 NA18985.hp2 NA18988.hp1 NA18989.hp1 NA18989.hp2 NA18992.hp1 NA18992.hp2 NA18994.hp1 NA18995.hp1 NA18995.hp2 NA18997.hp1 NA18998.hp2 NA18999.hp1 NA18999.hp2 NA19000.hp1 NA19000.hp2 NA19001.hp1 NA19001.hp2 NA19004.hp2 NA19005.hp1 NA19005.hp2 NA19007.hp1 NA19009.hp1 NA19009.hp2 NA19010.hp1 NA19010.hp2 NA19056.hp1 NA19056.hp2 NA19058.hp1 NA19060.hp1 NA19060.hp2 NA19062.hp1 NA19063.hp1 NA19063.hp2 NA19064.hp1 NA19066.hp1 NA19067.hp1 NA19067.hp2 NA19070.hp1 NA19070.hp2 NA19075.hp1 NA19075.hp2 NA19077.hp2 NA19084.hp2 NA19090.hp1 NA20752.hp1 NA20752.hp2 NA20805.hp1 NA20805.hp2 NA20905.hp1 NA20905.hp2 homoSapiens_chm13v2.hp1	intron_variant	MODIFIER	c.517-15dupC c.517-15dupC	ATG9A	ENSG00000198925.12	transcript	ENST00000361242.9	protein_coding	7/15	chr2	219224868
chr2:219224963	G G	C C	59	a0001c0001t0001g0001 a0001c0001t0001g0009 a0001c0001t0001g0012 others(56): Show a0001c0001t0001g0001 a0001c0001t0001g0009 a0001c0001t0001g0012 a0001c0001t0001g0015 a0001c0001t0001g0016 a0001c0001t0001g0019 a0001c0001t0001g0028 a0001c0001t0001g0031 a0001c0001t0001g0032 a0001c0001t0001g0038 a0001c0001t0001g0039 a0001c0001t0001g0046 a0001c0001t0001g0047 a0001c0001t0001g0048 a0001c0001t0001g0049 a0001c0001t0001g0050 a0001c0001t0001g0057 a0001c0001t0001g0058 a0001c0001t0001g0066 a0001c0001t0001g0067 a0001c0001t0001g0068 a0001c0001t0001g0069 a0001c0001t0001g0071 a0001c0001t0001g0073 a0001c0001t0002g0013 a0001c0001t0002g0017 a0001c0001t0002g0075 a0001c0001t0002g0077 a0001c0001t0002g0078 a0001c0001t0004g0004 a0001c0001t0004g0054 a0001c0001t0004g0062 a0001c0001t0004g0064 a0001c0001t0006g0005 a0001c0001t0010g0014 a0001c0001t0011g0029 a0001c0001t0012g0033 a0001c0001t0013g0060 a0001c0001t0013g0065 a0001c0001t0015g0037 a0001c0001t0016g0053 a0001c0001t0017g0059 a0001c0001t0018g0056 a0001c0001t0019g0061 a0001c0004t0001g0007 a0001c0004t0001g0021 a0001c0010t0001g0070 a0001c0013t0001g0055 a0001c0015t0001g0063 a0001c0016t0020g0074 a0002c0003t0002g0003 a0002c0003t0002g0020 a0002c0003t0002g0034 a0002c0003t0002g0035 a0002c0017t0002g0076 a0003c0008t0001g0030 a0006c0009t0002g0036 a0007c0011t0001g0051 a0009c0012t0001g0052	276	HG00099.hp1 HG00099.hp2 HG00140.hp1 others(273): Show HG00099.hp1 HG00099.hp2 HG00140.hp1 HG00140.hp2 HG00280.hp1 HG00280.hp2 HG00323.hp1 HG00323.hp2 HG00423.hp1 HG00423.hp2 HG00438.hp1 HG00438.hp2 HG00544.hp1 HG00544.hp2 HG00558.hp1 HG00558.hp2 HG00597.hp2 HG00609.hp1 HG00621.hp2 HG00639.hp1 HG00639.hp2 HG00642.hp1 HG00642.hp2 HG00673.hp1 HG00673.hp2 HG00733.hp1 HG00733.hp2 HG00735.hp1 HG00735.hp2 HG00738.hp1 HG00738.hp2 HG00741.hp1 HG00741.hp2 HG01069.hp1 HG01069.hp2 HG01070.hp1 HG01070.hp2 HG01071.hp1 HG01071.hp2 HG01074.hp1 HG01074.hp2 HG01081.hp1 HG01081.hp2 HG01099.hp1 HG01099.hp2 HG01106.hp1 HG01106.hp2 HG01109.hp1 HG01109.hp2 HG01167.hp1 HG01167.hp2 HG01168.hp1 HG01168.hp2 HG01169.hp1 HG01169.hp2 HG01175.hp2 HG01192.hp1 HG01192.hp2 HG01243.hp1 HG01255.hp1 HG01255.hp2 HG01256.hp1 HG01256.hp2 HG01257.hp1 HG01257.hp2 HG01258.hp1 HG01258.hp2 HG01261.hp1 HG01261.hp2 HG01346.hp1 HG01346.hp2 HG01358.hp1 HG01358.hp2 HG01433.hp1 HG01433.hp2 HG01496.hp1 HG01496.hp2 HG01515.hp1 HG01515.hp2 HG01517.hp1 HG01517.hp2 HG01928.hp1 HG01928.hp2 HG01943.hp1 HG01943.hp2 HG01975.hp1 HG01975.hp2 HG01978.hp1 HG01978.hp2 HG01981.hp1 HG01981.hp2 HG01993.hp1 HG01993.hp2 HG02004.hp1 HG02004.hp2 HG02015.hp2 HG02040.hp2 HG02055.hp1 HG02055.hp2 HG02074.hp1 HG02074.hp2 HG02083.hp1 HG02083.hp2 HG02109.hp2 HG02129.hp1 HG02129.hp2 HG02135.hp1 HG02135.hp2 HG02148.hp1 HG02148.hp2 HG02155.hp1 HG02155.hp2 HG02258.hp2 HG02273.hp1 HG02273.hp2 HG02293.hp1 HG02293.hp2 HG02523.hp1 HG02523.hp2 HG02559.hp2 HG02572.hp1 HG02615.hp1 HG02615.hp2 HG02622.hp1 HG02622.hp2 HG02630.hp2 HG02647.hp2 HG02683.hp1 HG02683.hp2 HG02698.hp1 HG02698.hp2 HG02723.hp1 HG02723.hp2 HG02735.hp1 HG02735.hp2 HG02738.hp1 HG02738.hp2 HG02886.hp1 HG02886.hp2 HG02895.hp2 HG02897.hp1 HG02897.hp2 HG02965.hp1 HG02965.hp2 HG02970.hp2 HG02976.hp2 HG03098.hp1 HG03098.hp2 HG03130.hp2 HG03139.hp2 HG03195.hp1 HG03209.hp1 HG03209.hp2 HG03225.hp1 HG03225.hp2 HG03453.hp1 HG03471.hp2 HG03486.hp2 HG03490.hp1 HG03490.hp2 HG03491.hp1 HG03491.hp2 HG03492.hp1 HG03492.hp2 HG03516.hp2 HG03579.hp1 HG03579.hp2 HG03654.hp1 HG03654.hp2 HG03669.hp2 HG03688.hp1 HG03688.hp2 HG03831.hp1 HG03831.hp2 HG03942.hp1 HG03942.hp2 HG04184.hp1 HG04184.hp2 HG04199.hp1 HG04199.hp2 HG04204.hp1 HG04204.hp2 HG04228.hp1 HG04228.hp2 NA18612.hp1 NA18612.hp2 NA18939.hp1 NA18939.hp2 NA18940.hp1 NA18941.hp1 NA18941.hp2 NA18943.hp1 NA18943.hp2 NA18944.hp1 NA18944.hp2 NA18946.hp1 NA18946.hp2 NA18947.hp1 NA18947.hp2 NA18950.hp1 NA18950.hp2 NA18951.hp1 NA18951.hp2 NA18959.hp1 NA18959.hp2 NA18965.hp2 NA18966.hp2 NA18973.hp1 NA18973.hp2 NA18974.hp2 NA18980.hp1 NA18980.hp2 NA18981.hp1 NA18981.hp2 NA18982.hp1 NA18983.hp1 NA18983.hp2 NA18984.hp1 NA18985.hp1 NA18985.hp2 NA18988.hp1 NA18989.hp1 NA18989.hp2 NA18992.hp1 NA18992.hp2 NA18994.hp1 NA18994.hp2 NA18995.hp1 NA18995.hp2 NA18997.hp1 NA18998.hp2 NA18999.hp1 NA18999.hp2 NA19000.hp1 NA19000.hp2 NA19001.hp1 NA19001.hp2 NA19004.hp2 NA19005.hp1 NA19005.hp2 NA19007.hp1 NA19009.hp1 NA19009.hp2 NA19010.hp1 NA19010.hp2 NA19056.hp1 NA19056.hp2 NA19058.hp1 NA19060.hp1 NA19060.hp2 NA19062.hp1 NA19063.hp1 NA19063.hp2 NA19064.hp1 NA19064.hp2 NA19066.hp1 NA19067.hp1 NA19067.hp2 NA19070.hp1 NA19070.hp2 NA19075.hp1 NA19075.hp2 NA19077.hp1 NA19077.hp2 NA19084.hp2 NA19090.hp1 NA20129.hp1 NA20300.hp2 NA20752.hp1 NA20752.hp2 NA20805.hp1 NA20805.hp2 NA20905.hp1 NA20905.hp2 NA21309.hp2 homoSapiens_chm13v2.hp1	intron_variant	MODIFIER	c.516+108C>G c.516+108C>G	ATG9A	ENSG00000198925.12	transcript	ENST00000361242.9	protein_coding	7/15	chr2	219224963
chr2:219225039	T T	C C	1	a0001c0002t0005g0025 a0001c0002t0005g0025	2	HG02451.hp2 HG06807.hp1 HG02451.hp2 HG06807.hp1	intron_variant	MODIFIER	c.516+32A>G c.516+32A>G	ATG9A	ENSG00000198925.12	transcript	ENST00000361242.9	protein_coding	7/15	chr2	219225039
chr2:219225252	G G	A A	1	a0001c0001t0001g0069 a0001c0001t0001g0069	1	HG01433.hp1 HG01433.hp1	intron_variant	MODIFIER	c.375-40C>T c.375-40C>T	ATG9A	ENSG00000198925.12	transcript	ENST00000361242.9	protein_coding	6/15	chr2	219225252
chr2:219225828	C C	T T	1	a0001c0001t0001g0050 a0001c0001t0001g0050	1	NA19056.hp2 NA19056.hp2	intron_variant	MODIFIER	c.213-256G>A c.213-256G>A	ATG9A	ENSG00000198925.12	transcript	ENST00000361242.9	protein_coding	5/15	chr2	219225828
chr2:219225861	GTC GTC	G G	6	a0001c0002t0003g0002 a0001c0002t0003g0040 a0001c0002t0003g0072 others(3): Show a0001c0002t0003g0002 a0001c0002t0003g0040 a0001c0002t0003g0072 a0001c0002t0007g0006 a0001c0002t0007g0041 a0001c0005t0005g0010	40	HG00597.hp1 HG00609.hp2 HG00621.hp1 others(37): Show HG00597.hp1 HG00609.hp2 HG00621.hp1 HG02015.hp1 HG02040.hp1 HG02257.hp2 HG02258.hp1 HG02486.hp1 HG02559.hp1 HG02809.hp1 HG02809.hp2 HG03130.hp1 HG03139.hp1 HG03195.hp2 HG03453.hp2 HG03540.hp1 HG03669.hp1 HG06807.hp2 NA18522.hp1 NA18522.hp2 NA18940.hp2 NA18965.hp1 NA18966.hp1 NA18974.hp1 NA18982.hp2 NA18984.hp2 NA18988.hp2 NA18993.hp1 NA18993.hp2 NA18997.hp2 NA18998.hp1 NA19004.hp1 NA19007.hp2 NA19030.hp2 NA19043.hp1 NA19058.hp2 NA19062.hp2 NA19066.hp2 NA19084.hp1 NA19090.hp2	intron_variant	MODIFIER	c.213-291_213-290del others(2): Show c.213-291_213-290delGA	ATG9A	ENSG00000198925.12	transcript	ENST00000361242.9	protein_coding	5/15	chr2	219225861
chr2:219225903	G G	A A	1	a0001c0001t0001g0032 a0001c0001t0001g0032	2	HG02129.hp1 HG02155.hp1 HG02129.hp1 HG02155.hp1	intron_variant	MODIFIER	c.213-331C>T c.213-331C>T	ATG9A	ENSG00000198925.12	transcript	ENST00000361242.9	protein_coding	5/15	chr2	219225903
chr2:219225926	C C	A A	3	a0001c0002t0003g0002 a0001c0002t0003g0040 a0001c0002t0003g0072 a0001c0002t0003g0002 a0001c0002t0003g0040 a0001c0002t0003g0072	24	HG00597.hp1 HG00609.hp2 HG00621.hp1 others(21): Show HG00597.hp1 HG00609.hp2 HG00621.hp1 HG02015.hp1 HG02040.hp1 HG03669.hp1 NA18940.hp2 NA18965.hp1 NA18966.hp1 NA18974.hp1 NA18982.hp2 NA18984.hp2 NA18988.hp2 NA18993.hp1 NA18993.hp2 NA18997.hp2 NA18998.hp1 NA19004.hp1 NA19007.hp2 NA19058.hp2 NA19062.hp2 NA19066.hp2 NA19084.hp1 NA19090.hp2	intron_variant	MODIFIER	c.213-354G>T c.213-354G>T	ATG9A	ENSG00000198925.12	transcript	ENST00000361242.9	protein_coding	5/15	chr2	219225926
chr2:219225947	G G	A A	1	a0001c0002t0009g0018 a0001c0002t0009g0018	3	HG02109.hp1 HG02145.hp1 HG02976.hp1 HG02109.hp1 HG02145.hp1 HG02976.hp1	intron_variant	MODIFIER	c.213-375C>T c.213-375C>T	ATG9A	ENSG00000198925.12	transcript	ENST00000361242.9	protein_coding	5/15	chr2	219225947
chr2:219226082	T T	C C	12	a0001c0001t0002g0013 a0001c0001t0002g0017 a0001c0001t0002g0075 others(9): Show a0001c0001t0002g0013 a0001c0001t0002g0017 a0001c0001t0002g0075 a0001c0001t0002g0077 a0001c0001t0002g0078 a0001c0016t0020g0074 a0002c0003t0002g0003 a0002c0003t0002g0020 a0002c0003t0002g0034 a0002c0003t0002g0035 a0002c0017t0002g0076 a0006c0009t0002g0036	41	HG00544.hp2 HG00558.hp2 HG00642.hp2 others(38): Show HG00544.hp2 HG00558.hp2 HG00642.hp2 HG00733.hp1 HG00735.hp2 HG01074.hp1 HG01167.hp1 HG01167.hp2 HG01169.hp1 HG01257.hp1 HG01258.hp2 HG01981.hp1 HG02109.hp2 HG02615.hp1 HG02622.hp1 HG02622.hp2 HG02630.hp2 HG02683.hp1 HG02735.hp1 HG02738.hp2 HG02886.hp2 HG02895.hp2 HG02897.hp2 HG02965.hp1 HG03098.hp2 HG03130.hp2 HG03209.hp1 HG03453.hp1 HG03486.hp2 HG03490.hp2 HG03492.hp1 HG03579.hp2 HG04204.hp2 NA18944.hp1 NA18973.hp1 NA18981.hp2 NA18994.hp2 NA19064.hp2 NA19077.hp1 NA20129.hp1 NA21309.hp2	intron_variant	MODIFIER	c.213-510A>G c.213-510A>G	ATG9A	ENSG00000198925.12	transcript	ENST00000361242.9	protein_coding	5/15	chr2	219226082
chr2:219226180	G G	A A	1	a0001c0002t0005g0044 a0001c0002t0005g0044	1	NA19240.hp2 NA19240.hp2	intron_variant	MODIFIER	c.213-608C>T c.213-608C>T	ATG9A	ENSG00000198925.12	transcript	ENST00000361242.9	protein_coding	5/15	chr2	219226180
chr2:219226255	C C	T T	1	a0001c0001t0002g0077 a0001c0001t0002g0077	1	HG03130.hp2 HG03130.hp2	intron_variant	MODIFIER	c.212+614G>A c.212+614G>A	ATG9A	ENSG00000198925.12	transcript	ENST00000361242.9	protein_coding	5/15	chr2	219226255
chr2:219226411	G G	A A	3	a0001c0001t0002g0013 a0001c0001t0002g0077 a0001c0001t0002g0078 a0001c0001t0002g0013 a0001c0001t0002g0077 a0001c0001t0002g0078	7	HG02630.hp2 HG03098.hp2 HG03130.hp2 others(4): Show HG02630.hp2 HG03098.hp2 HG03130.hp2 HG03209.hp1 HG03453.hp1 HG03579.hp2 NA20129.hp1	intron_variant	MODIFIER	c.212+458C>T c.212+458C>T	ATG9A	ENSG00000198925.12	transcript	ENST00000361242.9	protein_coding	5/15	chr2	219226411
chr2:219226413	G G	A A	1	a0001c0001t0014g0027 a0001c0001t0014g0027	2	HG02257.hp1 NA19240.hp1 HG02257.hp1 NA19240.hp1	intron_variant	MODIFIER	c.212+456C>T c.212+456C>T	ATG9A	ENSG00000198925.12	transcript	ENST00000361242.9	protein_coding	5/15	chr2	219226413
chr2:219226451	G G	A A	1	a0001c0001t0012g0033 a0001c0001t0012g0033	2	HG01168.hp2 HG01169.hp2 HG01168.hp2 HG01169.hp2	intron_variant	MODIFIER	c.212+418C>T c.212+418C>T	ATG9A	ENSG00000198925.12	transcript	ENST00000361242.9	protein_coding	5/15	chr2	219226451
chr2:219226456	G G	A A	1	a0001c0010t0001g0070 a0001c0010t0001g0070	1	NA20905.hp1 NA20905.hp1	intron_variant	MODIFIER	c.212+413C>T c.212+413C>T	ATG9A	ENSG00000198925.12	transcript	ENST00000361242.9	protein_coding	5/15	chr2	219226456
chr2:219226482	C C	T T	1	a0001c0001t0001g0049 a0001c0001t0001g0049	1	HG02698.hp1 HG02698.hp1	intron_variant	MODIFIER	c.212+387G>A c.212+387G>A	ATG9A	ENSG00000198925.12	transcript	ENST00000361242.9	protein_coding	5/15	chr2	219226482
chr2:219226530	CA CA	C C	46	a0001c0001t0001g0001 a0001c0001t0001g0009 a0001c0001t0001g0012 others(43): Show a0001c0001t0001g0001 a0001c0001t0001g0009 a0001c0001t0001g0012 a0001c0001t0001g0015 a0001c0001t0001g0016 a0001c0001t0001g0019 a0001c0001t0001g0028 a0001c0001t0001g0031 a0001c0001t0001g0032 a0001c0001t0001g0039 a0001c0001t0001g0046 a0001c0001t0001g0047 a0001c0001t0001g0048 a0001c0001t0001g0049 a0001c0001t0001g0050 a0001c0001t0001g0057 a0001c0001t0001g0058 a0001c0001t0001g0066 a0001c0001t0001g0067 a0001c0001t0001g0068 a0001c0001t0001g0069 a0001c0001t0001g0071 a0001c0001t0001g0073 a0001c0001t0004g0004 a0001c0001t0004g0054 a0001c0001t0004g0062 a0001c0001t0004g0064 a0001c0001t0006g0005 a0001c0001t0010g0014 a0001c0001t0011g0029 a0001c0001t0012g0033 a0001c0001t0013g0060 a0001c0001t0013g0065 a0001c0001t0015g0037 a0001c0001t0016g0053 a0001c0001t0017g0059 a0001c0001t0018g0056 a0001c0001t0019g0061 a0001c0004t0001g0007 a0001c0004t0001g0021 a0001c0010t0001g0070 a0001c0013t0001g0055 a0001c0015t0001g0063 a0003c0008t0001g0030 a0007c0011t0001g0051 a0009c0012t0001g0052	234	HG00099.hp1 HG00099.hp2 HG00140.hp1 others(231): Show HG00099.hp1 HG00099.hp2 HG00140.hp1 HG00140.hp2 HG00280.hp1 HG00280.hp2 HG00323.hp1 HG00323.hp2 HG00423.hp1 HG00423.hp2 HG00438.hp1 HG00438.hp2 HG00544.hp1 HG00558.hp1 HG00597.hp2 HG00609.hp1 HG00621.hp2 HG00639.hp1 HG00639.hp2 HG00642.hp1 HG00673.hp1 HG00673.hp2 HG00733.hp2 HG00735.hp1 HG00738.hp1 HG00738.hp2 HG00741.hp1 HG00741.hp2 HG01069.hp1 HG01069.hp2 HG01070.hp1 HG01070.hp2 HG01071.hp1 HG01071.hp2 HG01074.hp2 HG01081.hp1 HG01081.hp2 HG01099.hp1 HG01099.hp2 HG01106.hp1 HG01106.hp2 HG01109.hp1 HG01109.hp2 HG01168.hp1 HG01168.hp2 HG01169.hp2 HG01175.hp2 HG01192.hp1 HG01192.hp2 HG01243.hp1 HG01255.hp1 HG01255.hp2 HG01256.hp1 HG01256.hp2 HG01257.hp2 HG01258.hp1 HG01261.hp1 HG01261.hp2 HG01346.hp1 HG01346.hp2 HG01358.hp1 HG01358.hp2 HG01433.hp1 HG01433.hp2 HG01496.hp1 HG01496.hp2 HG01515.hp1 HG01515.hp2 HG01517.hp1 HG01517.hp2 HG01928.hp1 HG01928.hp2 HG01943.hp1 HG01943.hp2 HG01975.hp1 HG01975.hp2 HG01978.hp1 HG01978.hp2 HG01981.hp2 HG01993.hp1 HG01993.hp2 HG02004.hp1 HG02004.hp2 HG02015.hp2 HG02040.hp2 HG02055.hp1 HG02055.hp2 HG02074.hp1 HG02074.hp2 HG02083.hp1 HG02083.hp2 HG02129.hp1 HG02129.hp2 HG02135.hp1 HG02135.hp2 HG02148.hp1 HG02148.hp2 HG02155.hp1 HG02155.hp2 HG02258.hp2 HG02273.hp1 HG02273.hp2 HG02293.hp1 HG02293.hp2 HG02523.hp1 HG02523.hp2 HG02559.hp2 HG02572.hp1 HG02615.hp2 HG02647.hp2 HG02683.hp2 HG02698.hp1 HG02698.hp2 HG02723.hp1 HG02723.hp2 HG02735.hp2 HG02738.hp1 HG02886.hp1 HG02897.hp1 HG02965.hp2 HG02970.hp2 HG03098.hp1 HG03139.hp2 HG03195.hp1 HG03209.hp2 HG03225.hp1 HG03225.hp2 HG03471.hp2 HG03490.hp1 HG03491.hp1 HG03491.hp2 HG03492.hp2 HG03516.hp2 HG03579.hp1 HG03654.hp1 HG03654.hp2 HG03669.hp2 HG03688.hp1 HG03688.hp2 HG03831.hp1 HG03831.hp2 HG03942.hp1 HG03942.hp2 HG04184.hp1 HG04184.hp2 HG04199.hp1 HG04199.hp2 HG04204.hp1 HG04228.hp1 HG04228.hp2 NA18612.hp1 NA18612.hp2 NA18939.hp1 NA18939.hp2 NA18940.hp1 NA18941.hp1 NA18941.hp2 NA18943.hp1 NA18943.hp2 NA18944.hp2 NA18946.hp1 NA18946.hp2 NA18947.hp1 NA18947.hp2 NA18950.hp1 NA18950.hp2 NA18951.hp1 NA18951.hp2 NA18959.hp1 NA18959.hp2 NA18965.hp2 NA18966.hp2 NA18973.hp2 NA18974.hp2 NA18980.hp1 NA18980.hp2 NA18981.hp1 NA18982.hp1 NA18983.hp1 NA18983.hp2 NA18984.hp1 NA18985.hp1 NA18985.hp2 NA18988.hp1 NA18989.hp1 NA18989.hp2 NA18992.hp1 NA18992.hp2 NA18994.hp1 NA18995.hp1 NA18995.hp2 NA18997.hp1 NA18998.hp2 NA18999.hp1 NA18999.hp2 NA19000.hp1 NA19000.hp2 NA19001.hp1 NA19001.hp2 NA19004.hp2 NA19005.hp1 NA19005.hp2 NA19007.hp1 NA19009.hp1 NA19009.hp2 NA19010.hp1 NA19010.hp2 NA19056.hp1 NA19056.hp2 NA19058.hp1 NA19060.hp1 NA19060.hp2 NA19062.hp1 NA19063.hp1 NA19063.hp2 NA19064.hp1 NA19066.hp1 NA19067.hp1 NA19067.hp2 NA19070.hp1 NA19070.hp2 NA19075.hp1 NA19075.hp2 NA19077.hp2 NA19084.hp2 NA19090.hp1 NA20300.hp2 NA20752.hp1 NA20752.hp2 NA20805.hp1 NA20805.hp2 NA20905.hp1 NA20905.hp2 homoSapiens_chm13v2.hp1	intron_variant	MODIFIER	c.212+338delT c.212+338delT	ATG9A	ENSG00000198925.12	transcript	ENST00000361242.9	protein_coding	5/15	chr2	219226530
chr2:219226546	G G	A A	1	a0001c0001t0001g0071 a0001c0001t0001g0071	1	HG01168.hp1 HG01168.hp1	intron_variant	MODIFIER	c.212+323C>T c.212+323C>T	ATG9A	ENSG00000198925.12	transcript	ENST00000361242.9	protein_coding	5/15	chr2	219226546
chr2:219226754	G G	A A	2	a0001c0001t0002g0017 a0001c0001t0002g0075 a0001c0001t0002g0017 a0001c0001t0002g0075	5	HG02109.hp2 HG02615.hp1 HG02622.hp1 others(2): Show HG02109.hp2 HG02615.hp1 HG02622.hp1 HG02895.hp2 HG02897.hp2	intron_variant	MODIFIER	c.212+115C>T c.212+115C>T	ATG9A	ENSG00000198925.12	transcript	ENST00000361242.9	protein_coding	5/15	chr2	219226754
chr2:219226978	A A	C C	1	a0001c0001t0001g0048 a0001c0001t0001g0048	1	NA19070.hp2 NA19070.hp2	intron_variant	MODIFIER	c.148-45T>G c.148-45T>G	ATG9A	ENSG00000198925.12	transcript	ENST00000361242.9	protein_coding	4/15	chr2	219226978
chr2:219227043	A A	C C	12	a0001c0001t0002g0013 a0001c0001t0002g0017 a0001c0001t0002g0075 others(9): Show a0001c0001t0002g0013 a0001c0001t0002g0017 a0001c0001t0002g0075 a0001c0001t0002g0077 a0001c0001t0002g0078 a0001c0016t0020g0074 a0002c0003t0002g0003 a0002c0003t0002g0020 a0002c0003t0002g0034 a0002c0003t0002g0035 a0002c0017t0002g0076 a0006c0009t0002g0036	41	HG00544.hp2 HG00558.hp2 HG00642.hp2 others(38): Show HG00544.hp2 HG00558.hp2 HG00642.hp2 HG00733.hp1 HG00735.hp2 HG01074.hp1 HG01167.hp1 HG01167.hp2 HG01169.hp1 HG01257.hp1 HG01258.hp2 HG01981.hp1 HG02109.hp2 HG02615.hp1 HG02622.hp1 HG02622.hp2 HG02630.hp2 HG02683.hp1 HG02735.hp1 HG02738.hp2 HG02886.hp2 HG02895.hp2 HG02897.hp2 HG02965.hp1 HG03098.hp2 HG03130.hp2 HG03209.hp1 HG03453.hp1 HG03486.hp2 HG03490.hp2 HG03492.hp1 HG03579.hp2 HG04204.hp2 NA18944.hp1 NA18973.hp1 NA18981.hp2 NA18994.hp2 NA19064.hp2 NA19077.hp1 NA20129.hp1 NA21309.hp2	intron_variant	MODIFIER	c.148-110T>G c.148-110T>G	ATG9A	ENSG00000198925.12	transcript	ENST00000361242.9	protein_coding	4/15	chr2	219227043
chr2:219227085	A A	G G	1	a0001c0001t0014g0027 a0001c0001t0014g0027	2	HG02257.hp1 NA19240.hp1 HG02257.hp1 NA19240.hp1	intron_variant	MODIFIER	c.148-152T>C c.148-152T>C	ATG9A	ENSG00000198925.12	transcript	ENST00000361242.9	protein_coding	4/15	chr2	219227085
chr2:219227235	C C	T T	2	a0001c0001t0001g0046 a0001c0001t0001g0047 a0001c0001t0001g0046 a0001c0001t0001g0047	2	HG01515.hp2 HG01517.hp2 HG01515.hp2 HG01517.hp2	intron_variant	MODIFIER	c.148-302G>A c.148-302G>A	ATG9A	ENSG00000198925.12	transcript	ENST00000361242.9	protein_coding	4/15	chr2	219227235
chr2:219227246	G G	T T	1	a0001c0001t0001g0038 a0001c0001t0001g0038	1	HG02976.hp2 HG02976.hp2	intron_variant	MODIFIER	c.148-313C>A c.148-313C>A	ATG9A	ENSG00000198925.12	transcript	ENST00000361242.9	protein_coding	4/15	chr2	219227246
chr2:219227408	G G	A A	1	a0001c0002t0007g0041 a0001c0002t0007g0041	1	NA19043.hp1 NA19043.hp1	intron_variant	MODIFIER	c.147+362C>T c.147+362C>T	ATG9A	ENSG00000198925.12	transcript	ENST00000361242.9	protein_coding	4/15	chr2	219227408
chr2:219227418	G G	A A	1	a0001c0001t0001g0019 a0001c0001t0001g0019	3	HG00741.hp1 HG01255.hp2 HG03669.hp2 HG00741.hp1 HG01255.hp2 HG03669.hp2	intron_variant	MODIFIER	c.147+352C>T c.147+352C>T	ATG9A	ENSG00000198925.12	transcript	ENST00000361242.9	protein_coding	4/15	chr2	219227418
chr2:219227461	G G	A A	3	a0001c0002t0009g0018 a0001c0002t0009g0026 a0008c0014t0009g0045 a0001c0002t0009g0018 a0001c0002t0009g0026 a0008c0014t0009g0045	6	HG02109.hp1 HG02145.hp1 HG02486.hp2 others(3): Show HG02109.hp1 HG02145.hp1 HG02486.hp2 HG02572.hp2 HG02717.hp1 HG02976.hp1	intron_variant	MODIFIER	c.147+309C>T c.147+309C>T	ATG9A	ENSG00000198925.12	transcript	ENST00000361242.9	protein_coding	4/15	chr2	219227461
chr2:219227515	CA CA	C C	46	a0001c0001t0001g0001 a0001c0001t0001g0009 a0001c0001t0001g0012 others(43): Show a0001c0001t0001g0001 a0001c0001t0001g0009 a0001c0001t0001g0012 a0001c0001t0001g0015 a0001c0001t0001g0016 a0001c0001t0001g0019 a0001c0001t0001g0028 a0001c0001t0001g0031 a0001c0001t0001g0032 a0001c0001t0001g0039 a0001c0001t0001g0046 a0001c0001t0001g0047 a0001c0001t0001g0048 a0001c0001t0001g0049 a0001c0001t0001g0050 a0001c0001t0001g0057 a0001c0001t0001g0058 a0001c0001t0001g0066 a0001c0001t0001g0067 a0001c0001t0001g0068 a0001c0001t0001g0069 a0001c0001t0001g0071 a0001c0001t0001g0073 a0001c0001t0004g0004 a0001c0001t0004g0054 a0001c0001t0004g0062 a0001c0001t0004g0064 a0001c0001t0006g0005 a0001c0001t0010g0014 a0001c0001t0011g0029 a0001c0001t0012g0033 a0001c0001t0013g0060 a0001c0001t0013g0065 a0001c0001t0015g0037 a0001c0001t0016g0053 a0001c0001t0017g0059 a0001c0001t0018g0056 a0001c0001t0019g0061 a0001c0004t0001g0007 a0001c0004t0001g0021 a0001c0010t0001g0070 a0001c0013t0001g0055 a0001c0015t0001g0063 a0003c0008t0001g0030 a0007c0011t0001g0051 a0009c0012t0001g0052	234	HG00099.hp1 HG00099.hp2 HG00140.hp1 others(231): Show HG00099.hp1 HG00099.hp2 HG00140.hp1 HG00140.hp2 HG00280.hp1 HG00280.hp2 HG00323.hp1 HG00323.hp2 HG00423.hp1 HG00423.hp2 HG00438.hp1 HG00438.hp2 HG00544.hp1 HG00558.hp1 HG00597.hp2 HG00609.hp1 HG00621.hp2 HG00639.hp1 HG00639.hp2 HG00642.hp1 HG00673.hp1 HG00673.hp2 HG00733.hp2 HG00735.hp1 HG00738.hp1 HG00738.hp2 HG00741.hp1 HG00741.hp2 HG01069.hp1 HG01069.hp2 HG01070.hp1 HG01070.hp2 HG01071.hp1 HG01071.hp2 HG01074.hp2 HG01081.hp1 HG01081.hp2 HG01099.hp1 HG01099.hp2 HG01106.hp1 HG01106.hp2 HG01109.hp1 HG01109.hp2 HG01168.hp1 HG01168.hp2 HG01169.hp2 HG01175.hp2 HG01192.hp1 HG01192.hp2 HG01243.hp1 HG01255.hp1 HG01255.hp2 HG01256.hp1 HG01256.hp2 HG01257.hp2 HG01258.hp1 HG01261.hp1 HG01261.hp2 HG01346.hp1 HG01346.hp2 HG01358.hp1 HG01358.hp2 HG01433.hp1 HG01433.hp2 HG01496.hp1 HG01496.hp2 HG01515.hp1 HG01515.hp2 HG01517.hp1 HG01517.hp2 HG01928.hp1 HG01928.hp2 HG01943.hp1 HG01943.hp2 HG01975.hp1 HG01975.hp2 HG01978.hp1 HG01978.hp2 HG01981.hp2 HG01993.hp1 HG01993.hp2 HG02004.hp1 HG02004.hp2 HG02015.hp2 HG02040.hp2 HG02055.hp1 HG02055.hp2 HG02074.hp1 HG02074.hp2 HG02083.hp1 HG02083.hp2 HG02129.hp1 HG02129.hp2 HG02135.hp1 HG02135.hp2 HG02148.hp1 HG02148.hp2 HG02155.hp1 HG02155.hp2 HG02258.hp2 HG02273.hp1 HG02273.hp2 HG02293.hp1 HG02293.hp2 HG02523.hp1 HG02523.hp2 HG02559.hp2 HG02572.hp1 HG02615.hp2 HG02647.hp2 HG02683.hp2 HG02698.hp1 HG02698.hp2 HG02723.hp1 HG02723.hp2 HG02735.hp2 HG02738.hp1 HG02886.hp1 HG02897.hp1 HG02965.hp2 HG02970.hp2 HG03098.hp1 HG03139.hp2 HG03195.hp1 HG03209.hp2 HG03225.hp1 HG03225.hp2 HG03471.hp2 HG03490.hp1 HG03491.hp1 HG03491.hp2 HG03492.hp2 HG03516.hp2 HG03579.hp1 HG03654.hp1 HG03654.hp2 HG03669.hp2 HG03688.hp1 HG03688.hp2 HG03831.hp1 HG03831.hp2 HG03942.hp1 HG03942.hp2 HG04184.hp1 HG04184.hp2 HG04199.hp1 HG04199.hp2 HG04204.hp1 HG04228.hp1 HG04228.hp2 NA18612.hp1 NA18612.hp2 NA18939.hp1 NA18939.hp2 NA18940.hp1 NA18941.hp1 NA18941.hp2 NA18943.hp1 NA18943.hp2 NA18944.hp2 NA18946.hp1 NA18946.hp2 NA18947.hp1 NA18947.hp2 NA18950.hp1 NA18950.hp2 NA18951.hp1 NA18951.hp2 NA18959.hp1 NA18959.hp2 NA18965.hp2 NA18966.hp2 NA18973.hp2 NA18974.hp2 NA18980.hp1 NA18980.hp2 NA18981.hp1 NA18982.hp1 NA18983.hp1 NA18983.hp2 NA18984.hp1 NA18985.hp1 NA18985.hp2 NA18988.hp1 NA18989.hp1 NA18989.hp2 NA18992.hp1 NA18992.hp2 NA18994.hp1 NA18995.hp1 NA18995.hp2 NA18997.hp1 NA18998.hp2 NA18999.hp1 NA18999.hp2 NA19000.hp1 NA19000.hp2 NA19001.hp1 NA19001.hp2 NA19004.hp2 NA19005.hp1 NA19005.hp2 NA19007.hp1 NA19009.hp1 NA19009.hp2 NA19010.hp1 NA19010.hp2 NA19056.hp1 NA19056.hp2 NA19058.hp1 NA19060.hp1 NA19060.hp2 NA19062.hp1 NA19063.hp1 NA19063.hp2 NA19064.hp1 NA19066.hp1 NA19067.hp1 NA19067.hp2 NA19070.hp1 NA19070.hp2 NA19075.hp1 NA19075.hp2 NA19077.hp2 NA19084.hp2 NA19090.hp1 NA20300.hp2 NA20752.hp1 NA20752.hp2 NA20805.hp1 NA20805.hp2 NA20905.hp1 NA20905.hp2 homoSapiens_chm13v2.hp1	intron_variant	MODIFIER	c.147+254delT c.147+254delT	ATG9A	ENSG00000198925.12	transcript	ENST00000361242.9	protein_coding	4/15	chr2	219227515
chr2:219227531	C C	G G	1	a0001c0001t0002g0075 a0001c0001t0002g0075	1	HG02109.hp2 HG02109.hp2	intron_variant	MODIFIER	c.147+239G>C c.147+239G>C	ATG9A	ENSG00000198925.12	transcript	ENST00000361242.9	protein_coding	4/15	chr2	219227531
chr2:219227645	C C	T T	1	a0001c0001t0014g0027 a0001c0001t0014g0027	2	HG02257.hp1 NA19240.hp1 HG02257.hp1 NA19240.hp1	intron_variant	MODIFIER	c.147+125G>A c.147+125G>A	ATG9A	ENSG00000198925.12	transcript	ENST00000361242.9	protein_coding	4/15	chr2	219227645
chr2:219228115	T T	C C	1	a0001c0016t0020g0074 a0001c0016t0020g0074	1	HG02886.hp2 HG02886.hp2	intron_variant	MODIFIER	c.-29-62A>G c.-29-62A>G	ATG9A	ENSG00000198925.12	transcript	ENST00000361242.9	protein_coding	2/15	chr2	219228115
chr2:219228552	G G	A A	1	a0001c0001t0014g0027 a0001c0001t0014g0027	2	HG02257.hp1 NA19240.hp1 HG02257.hp1 NA19240.hp1	intron_variant	MODIFIER	c.-81-67C>T c.-81-67C>T	ATG9A	ENSG00000198925.12	transcript	ENST00000361242.9	protein_coding	1/15	chr2	219228552
chr2:219228636	C C	T T	5	a0001c0002t0003g0002 a0001c0002t0003g0040 a0001c0002t0007g0006 others(2): Show a0001c0002t0003g0002 a0001c0002t0003g0040 a0001c0002t0007g0006 a0001c0002t0007g0041 a0001c0005t0005g0010	39	HG00597.hp1 HG00609.hp2 HG00621.hp1 others(36): Show HG00597.hp1 HG00609.hp2 HG00621.hp1 HG02015.hp1 HG02040.hp1 HG02257.hp2 HG02258.hp1 HG02486.hp1 HG02559.hp1 HG02809.hp1 HG02809.hp2 HG03130.hp1 HG03139.hp1 HG03195.hp2 HG03453.hp2 HG03540.hp1 HG03669.hp1 HG06807.hp2 NA18522.hp1 NA18522.hp2 NA18940.hp2 NA18965.hp1 NA18966.hp1 NA18974.hp1 NA18982.hp2 NA18984.hp2 NA18988.hp2 NA18993.hp1 NA18997.hp2 NA18998.hp1 NA19004.hp1 NA19007.hp2 NA19030.hp2 NA19043.hp1 NA19058.hp2 NA19062.hp2 NA19066.hp2 NA19084.hp1 NA19090.hp2	intron_variant	MODIFIER	c.-81-151G>A c.-81-151G>A	ATG9A	ENSG00000198925.12	transcript	ENST00000361242.9	protein_coding	1/15	chr2	219228636
chr2:219228685	G G	A A	1	a0001c0016t0020g0074 a0001c0016t0020g0074	1	HG02886.hp2 HG02886.hp2	intron_variant	MODIFIER	c.-81-200C>T c.-81-200C>T	ATG9A	ENSG00000198925.12	transcript	ENST00000361242.9	protein_coding	1/15	chr2	219228685
chr2:219228701	T T	G G	47	a0001c0001t0001g0001 a0001c0001t0001g0009 a0001c0001t0001g0012 others(44): Show a0001c0001t0001g0001 a0001c0001t0001g0009 a0001c0001t0001g0012 a0001c0001t0001g0015 a0001c0001t0001g0016 a0001c0001t0001g0019 a0001c0001t0001g0028 a0001c0001t0001g0031 a0001c0001t0001g0032 a0001c0001t0001g0039 a0001c0001t0001g0046 a0001c0001t0001g0047 a0001c0001t0001g0048 a0001c0001t0001g0049 a0001c0001t0001g0050 a0001c0001t0001g0057 a0001c0001t0001g0058 a0001c0001t0001g0066 a0001c0001t0001g0067 a0001c0001t0001g0068 a0001c0001t0001g0069 a0001c0001t0001g0071 a0001c0001t0001g0073 a0001c0001t0004g0004 a0001c0001t0004g0054 a0001c0001t0004g0062 a0001c0001t0004g0064 a0001c0001t0006g0005 a0001c0001t0010g0014 a0001c0001t0011g0029 a0001c0001t0012g0033 a0001c0001t0013g0060 a0001c0001t0013g0065 a0001c0001t0015g0037 a0001c0001t0016g0053 a0001c0001t0017g0059 a0001c0001t0018g0056 a0001c0001t0019g0061 a0001c0002t0003g0072 a0001c0004t0001g0007 a0001c0004t0001g0021 a0001c0010t0001g0070 a0001c0013t0001g0055 a0001c0015t0001g0063 a0003c0008t0001g0030 a0007c0011t0001g0051 a0009c0012t0001g0052	235	HG00099.hp1 HG00099.hp2 HG00140.hp1 others(232): Show HG00099.hp1 HG00099.hp2 HG00140.hp1 HG00140.hp2 HG00280.hp1 HG00280.hp2 HG00323.hp1 HG00323.hp2 HG00423.hp1 HG00423.hp2 HG00438.hp1 HG00438.hp2 HG00544.hp1 HG00558.hp1 HG00597.hp2 HG00609.hp1 HG00621.hp2 HG00639.hp1 HG00639.hp2 HG00642.hp1 HG00673.hp1 HG00673.hp2 HG00733.hp2 HG00735.hp1 HG00738.hp1 HG00738.hp2 HG00741.hp1 HG00741.hp2 HG01069.hp1 HG01069.hp2 HG01070.hp1 HG01070.hp2 HG01071.hp1 HG01071.hp2 HG01074.hp2 HG01081.hp1 HG01081.hp2 HG01099.hp1 HG01099.hp2 HG01106.hp1 HG01106.hp2 HG01109.hp1 HG01109.hp2 HG01168.hp1 HG01168.hp2 HG01169.hp2 HG01175.hp2 HG01192.hp1 HG01192.hp2 HG01243.hp1 HG01255.hp1 HG01255.hp2 HG01256.hp1 HG01256.hp2 HG01257.hp2 HG01258.hp1 HG01261.hp1 HG01261.hp2 HG01346.hp1 HG01346.hp2 HG01358.hp1 HG01358.hp2 HG01433.hp1 HG01433.hp2 HG01496.hp1 HG01496.hp2 HG01515.hp1 HG01515.hp2 HG01517.hp1 HG01517.hp2 HG01928.hp1 HG01928.hp2 HG01943.hp1 HG01943.hp2 HG01975.hp1 HG01975.hp2 HG01978.hp1 HG01978.hp2 HG01981.hp2 HG01993.hp1 HG01993.hp2 HG02004.hp1 HG02004.hp2 HG02015.hp2 HG02040.hp2 HG02055.hp1 HG02055.hp2 HG02074.hp1 HG02074.hp2 HG02083.hp1 HG02083.hp2 HG02129.hp1 HG02129.hp2 HG02135.hp1 HG02135.hp2 HG02148.hp1 HG02148.hp2 HG02155.hp1 HG02155.hp2 HG02258.hp2 HG02273.hp1 HG02273.hp2 HG02293.hp1 HG02293.hp2 HG02523.hp1 HG02523.hp2 HG02559.hp2 HG02572.hp1 HG02615.hp2 HG02647.hp2 HG02683.hp2 HG02698.hp1 HG02698.hp2 HG02723.hp1 HG02723.hp2 HG02735.hp2 HG02738.hp1 HG02886.hp1 HG02897.hp1 HG02965.hp2 HG02970.hp2 HG03098.hp1 HG03139.hp2 HG03195.hp1 HG03209.hp2 HG03225.hp1 HG03225.hp2 HG03471.hp2 HG03490.hp1 HG03491.hp1 HG03491.hp2 HG03492.hp2 HG03516.hp2 HG03579.hp1 HG03654.hp1 HG03654.hp2 HG03669.hp2 HG03688.hp1 HG03688.hp2 HG03831.hp1 HG03831.hp2 HG03942.hp1 HG03942.hp2 HG04184.hp1 HG04184.hp2 HG04199.hp1 HG04199.hp2 HG04204.hp1 HG04228.hp1 HG04228.hp2 NA18612.hp1 NA18612.hp2 NA18939.hp1 NA18939.hp2 NA18940.hp1 NA18941.hp1 NA18941.hp2 NA18943.hp1 NA18943.hp2 NA18944.hp2 NA18946.hp1 NA18946.hp2 NA18947.hp1 NA18947.hp2 NA18950.hp1 NA18950.hp2 NA18951.hp1 NA18951.hp2 NA18959.hp1 NA18959.hp2 NA18965.hp2 NA18966.hp2 NA18973.hp2 NA18974.hp2 NA18980.hp1 NA18980.hp2 NA18981.hp1 NA18982.hp1 NA18983.hp1 NA18983.hp2 NA18984.hp1 NA18985.hp1 NA18985.hp2 NA18988.hp1 NA18989.hp1 NA18989.hp2 NA18992.hp1 NA18992.hp2 NA18993.hp2 NA18994.hp1 NA18995.hp1 NA18995.hp2 NA18997.hp1 NA18998.hp2 NA18999.hp1 NA18999.hp2 NA19000.hp1 NA19000.hp2 NA19001.hp1 NA19001.hp2 NA19004.hp2 NA19005.hp1 NA19005.hp2 NA19007.hp1 NA19009.hp1 NA19009.hp2 NA19010.hp1 NA19010.hp2 NA19056.hp1 NA19056.hp2 NA19058.hp1 NA19060.hp1 NA19060.hp2 NA19062.hp1 NA19063.hp1 NA19063.hp2 NA19064.hp1 NA19066.hp1 NA19067.hp1 NA19067.hp2 NA19070.hp1 NA19070.hp2 NA19075.hp1 NA19075.hp2 NA19077.hp2 NA19084.hp2 NA19090.hp1 NA20300.hp2 NA20752.hp1 NA20752.hp2 NA20805.hp1 NA20805.hp2 NA20905.hp1 NA20905.hp2 homoSapiens_chm13v2.hp1	intron_variant	MODIFIER	c.-81-216A>C c.-81-216A>C	ATG9A	ENSG00000198925.12	transcript	ENST00000361242.9	protein_coding	1/15	chr2	219228701
chr2:219228712	A A	G G	1	a0001c0016t0020g0074 a0001c0016t0020g0074	1	HG02886.hp2 HG02886.hp2	intron_variant	MODIFIER	c.-81-227T>C c.-81-227T>C	ATG9A	ENSG00000198925.12	transcript	ENST00000361242.9	protein_coding	1/15	chr2	219228712
chr2:219228850	G G	A A	1	a0001c0001t0001g0073 a0001c0001t0001g0073	1	HG01993.hp1 HG01993.hp1	intron_variant	MODIFIER	c.-81-365C>T c.-81-365C>T	ATG9A	ENSG00000198925.12	transcript	ENST00000361242.9	protein_coding	1/15	chr2	219228850
chr2:219228859	C C	T T	2	a0001c0001t0001g0039 a0001c0004t0001g0021 a0001c0001t0001g0039 a0001c0004t0001g0021	3	NA18941.hp1 NA18941.hp2 NA19063.hp2 NA18941.hp1 NA18941.hp2 NA19063.hp2	intron_variant	MODIFIER	c.-81-374G>A c.-81-374G>A	ATG9A	ENSG00000198925.12	transcript	ENST00000361242.9	protein_coding	1/15	chr2	219228859
chr2:219228940	C C	T T	1	a0001c0001t0001g0038 a0001c0001t0001g0038	1	HG02976.hp2 HG02976.hp2	intron_variant	MODIFIER	c.-81-455G>A c.-81-455G>A	ATG9A	ENSG00000198925.12	transcript	ENST00000361242.9	protein_coding	1/15	chr2	219228940
chr2:219229250	C C	A A	9	a0001c0001t0002g0013 a0001c0001t0002g0077 a0001c0001t0002g0078 others(6): Show a0001c0001t0002g0013 a0001c0001t0002g0077 a0001c0001t0002g0078 a0002c0003t0002g0003 a0002c0003t0002g0020 a0002c0003t0002g0034 a0002c0003t0002g0035 a0002c0017t0002g0076 a0006c0009t0002g0036	35	HG00544.hp2 HG00558.hp2 HG00642.hp2 others(32): Show HG00544.hp2 HG00558.hp2 HG00642.hp2 HG00733.hp1 HG00735.hp2 HG01074.hp1 HG01167.hp1 HG01167.hp2 HG01169.hp1 HG01257.hp1 HG01258.hp2 HG01981.hp1 HG02622.hp2 HG02630.hp2 HG02683.hp1 HG02735.hp1 HG02738.hp2 HG02965.hp1 HG03098.hp2 HG03130.hp2 HG03209.hp1 HG03453.hp1 HG03486.hp2 HG03490.hp2 HG03492.hp1 HG03579.hp2 HG04204.hp2 NA18944.hp1 NA18973.hp1 NA18981.hp2 NA18994.hp2 NA19064.hp2 NA19077.hp1 NA20129.hp1 NA21309.hp2	intron_variant	MODIFIER	c.-82+285G>T c.-82+285G>T	ATG9A	ENSG00000198925.12	transcript	ENST00000361242.9	protein_coding	1/15	chr2	219229250

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🧬 Gene Summary

AAmino acid(protein) Level Haplotype Info (Total: 9)

CCoding Level Haplotype Info (Total: 17)

TTranscript Level Haplotype Info (Total: 20)

GGenebody Level Haplotype Info (Total: 78)

A C AC Level (Amino Acid + Coding) Haplotype Info (Total: 17)

A C T ACT Level (Amino Acid + Coding + Transcript) Haplotype Info (Total: 34)

A C T G ACTG Level (Amino Acid + Coding + Transcript + Genebody) Haplotype Info (Total: 78)

Haplotype Details by Sample (Haploid Level) (Total: 348)

AAmino acid(protein) Level Haplotype Related Variants (Effect to Protein Coding Variants) (Total: 8)

CCoding Level Variants (Synonymous Mutations) (Total: 8)

TTranscript Level Haplotype Variants (5'UTR+3'UTR) (Total: 18)

GGenebody Level Haplotype Variants (Intron) (Total: 65)

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Annotation (Repeats)

Annotation (SNP Array)