Joint Open Genome and Omics Platform (JoGo)

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geneid	645864
ensemblid	ENSG00000182798.10
hgncid	17418
symbol	MAGEB17
name	MAGE family member B17
refseq_nuc	NM_001277307.2
refseq_prot	NP_001264236.1
ensembl_nuc	ENST00000400004.6
ensembl_prot	ENSP00000382884.2
mane_status	MANE Select
chr	chrX
start	16167481
end	16171464
strand	+
ver	v1.2
region	chrX:16167481-16171464
region5000	chrX:16162481-16176464
regionname0	MAGEB17_chrX_16167481_16171464
regionname5000	MAGEB17_chrX_16162481_16176464

ahapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	alen	total	AFR	AMR	EAS	EUR	SAS	JPT	regionname	genename	aa	chr	start	end
a0001	1/1	336	277	70	61	109	9	26	86	MAGEB17_chrX_16162481_16176464	MAGEB17	copy fasta	chrX	16162481	16176464
a0002	0/0	336	2	0	0	0	0	2	0	MAGEB17_chrX_16162481_16176464	MAGEB17	copy fasta	chrX	16162481	16176464
a0003	0/0	80	1	0	0	1	0	0	1	MAGEB17_chrX_16162481_16176464	MAGEB17	copy fasta	chrX	16162481	16176464
a0004	0/0	217	1	0	0	1	0	0	1	MAGEB17_chrX_16162481_16176464	MAGEB17	copy fasta	chrX	16162481	16176464
a0005	0/0	80	1	0	0	1	0	0	1	MAGEB17_chrX_16162481_16176464	MAGEB17	copy fasta	chrX	16162481	16176464

chapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	clen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	cseq	chr	start	end
c0001	1/1	1011	272	70	61	104	9	26	MAGEB17_chrX_16162481_16176464	MAGEB17	copy fasta	chrX	16162481	16176464
c0002	0/0	1011	4	0	0	4	0	0	MAGEB17_chrX_16162481_16176464	MAGEB17	copy fasta	chrX	16162481	16176464
c0003	0/0	1011	2	0	0	0	0	2	MAGEB17_chrX_16162481_16176464	MAGEB17	copy fasta	chrX	16162481	16176464
c0004	0/0	1012	1	0	0	1	0	0	MAGEB17_chrX_16162481_16176464	MAGEB17	copy fasta	chrX	16162481	16176464
c0005	0/0	1012	1	0	0	1	0	0	MAGEB17_chrX_16162481_16176464	MAGEB17	copy fasta	chrX	16162481	16176464
c0006	0/0	1011	1	0	0	1	0	0	MAGEB17_chrX_16162481_16176464	MAGEB17	copy fasta	chrX	16162481	16176464
c0007	0/0	1009	1	0	0	1	0	0	MAGEB17_chrX_16162481_16176464	MAGEB17	copy fasta	chrX	16162481	16176464

thapid	grch38 chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	tlen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	tseq	chr	start	end
t0001	1/1	424	282	70	61	112	9	28	MAGEB17_chrX_16162481_16176464	MAGEB17	copy fasta	chrX	16162481	16176464

ghapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	chr	start	end
g0001	1/0	178	41	34	83	2	17	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
g0002	0/1	53	2	16	22	5	7	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
g0003	0/0	20	14	6	0	0	0	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
g0004	0/0	6	6	0	0	0	0	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
g0005	0/0	3	0	0	0	2	1	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
g0006	0/0	2	0	0	0	0	2	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
g0007	0/0	2	2	0	0	0	0	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
g0008	0/0	2	0	2	0	0	0	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
g0009	0/0	2	2	0	0	0	0	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
g0010	0/0	1	0	0	1	0	0	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
g0011	0/0	1	0	0	1	0	0	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
g0012	0/0	1	1	0	0	0	0	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
g0013	0/0	1	0	0	1	0	0	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
g0014	0/0	1	0	0	0	0	1	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
g0015	0/0	1	0	0	1	0	0	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
g0016	0/0	1	1	0	0	0	0	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
g0017	0/0	1	0	0	1	0	0	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
g0018	0/0	1	0	1	0	0	0	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
g0019	0/0	1	0	0	1	0	0	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
g0020	0/0	1	1	0	0	0	0	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
g0021	0/0	1	0	0	1	0	0	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
g0022	0/0	1	0	1	0	0	0	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
g0023	0/0	1	0	1	0	0	0	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464

achapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	clen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	cseq	chr	start	end
a0001c0001	1/1	1011	272	70	61	104	9	26	MAGEB17_chrX_16162481_16176464	MAGEB17	copy fasta	chrX	16162481	16176464
a0001c0002	0/0	1011	4	0	0	4	0	0	MAGEB17_chrX_16162481_16176464	MAGEB17	copy fasta	chrX	16162481	16176464
a0001c0006	0/0	1011	1	0	0	1	0	0	MAGEB17_chrX_16162481_16176464	MAGEB17	copy fasta	chrX	16162481	16176464
a0002c0003	0/0	1011	2	0	0	0	0	2	MAGEB17_chrX_16162481_16176464	MAGEB17	copy fasta	chrX	16162481	16176464
a0003c0007	0/0	1009	1	0	0	1	0	0	MAGEB17_chrX_16162481_16176464	MAGEB17	copy fasta	chrX	16162481	16176464
a0004c0005	0/0	1012	1	0	0	1	0	0	MAGEB17_chrX_16162481_16176464	MAGEB17	copy fasta	chrX	16162481	16176464
a0005c0004	0/0	1012	1	0	0	1	0	0	MAGEB17_chrX_16162481_16176464	MAGEB17	copy fasta	chrX	16162481	16176464

acthapid	grch38 chm13v2	tlen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	tseq	chr	start	end
a0001c0001t0001	1/1	1434	272	70	61	104	9	26	MAGEB17_chrX_16162481_16176464	MAGEB17	copy fasta	chrX	16162481	16176464
a0001c0002t0001	0/0	1434	4	0	0	4	0	0	MAGEB17_chrX_16162481_16176464	MAGEB17	copy fasta	chrX	16162481	16176464
a0001c0006t0001	0/0	1434	1	0	0	1	0	0	MAGEB17_chrX_16162481_16176464	MAGEB17	copy fasta	chrX	16162481	16176464
a0002c0003t0001	0/0	1434	2	0	0	0	0	2	MAGEB17_chrX_16162481_16176464	MAGEB17	copy fasta	chrX	16162481	16176464
a0003c0007t0001	0/0	1432	1	0	0	1	0	0	MAGEB17_chrX_16162481_16176464	MAGEB17	copy fasta	chrX	16162481	16176464
a0004c0005t0001	0/0	1435	1	0	0	1	0	0	MAGEB17_chrX_16162481_16176464	MAGEB17	copy fasta	chrX	16162481	16176464
a0005c0004t0001	0/0	1435	1	0	0	1	0	0	MAGEB17_chrX_16162481_16176464	MAGEB17	copy fasta	chrX	16162481	16176464

actghapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	chr	start	end
a0001c0001t0001g0001	1/0	171	41	34	78	2	15	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
a0001c0001t0001g0002	0/1	52	2	16	21	5	7	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
a0001c0001t0001g0003	0/0	20	14	6	0	0	0	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
a0001c0001t0001g0004	0/0	6	6	0	0	0	0	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
a0001c0001t0001g0005	0/0	3	0	0	0	2	1	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
a0001c0001t0001g0006	0/0	2	0	0	0	0	2	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
a0001c0001t0001g0007	0/0	2	2	0	0	0	0	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
a0001c0001t0001g0008	0/0	2	0	2	0	0	0	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
a0001c0001t0001g0009	0/0	2	2	0	0	0	0	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
a0001c0001t0001g0011	0/0	1	0	0	1	0	0	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
a0001c0001t0001g0012	0/0	1	1	0	0	0	0	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
a0001c0001t0001g0013	0/0	1	0	0	1	0	0	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
a0001c0001t0001g0014	0/0	1	0	0	0	0	1	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
a0001c0001t0001g0016	0/0	1	1	0	0	0	0	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
a0001c0001t0001g0017	0/0	1	0	0	1	0	0	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
a0001c0001t0001g0018	0/0	1	0	1	0	0	0	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
a0001c0001t0001g0019	0/0	1	0	0	1	0	0	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
a0001c0001t0001g0020	0/0	1	1	0	0	0	0	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
a0001c0001t0001g0021	0/0	1	0	0	1	0	0	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
a0001c0001t0001g0022	0/0	1	0	1	0	0	0	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
a0001c0001t0001g0023	0/0	1	0	1	0	0	0	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
a0001c0002t0001g0001	0/0	4	0	0	4	0	0	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
a0001c0006t0001g0002	0/0	1	0	0	1	0	0	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
a0002c0003t0001g0001	0/0	2	0	0	0	0	2	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
a0003c0007t0001g0015	0/0	1	0	0	1	0	0	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
a0004c0005t0001g0001	0/0	1	0	0	1	0	0	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
a0005c0004t0001g0010	0/0	1	0	0	1	0	0	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464

sampleid	ID haplotypeid	ahapid	chapid	thapid	ghapid	gpopname	popname	regionname	genename	chr	start	end
HG00140	hp1	a0001	c0001	t0001	g0001	EUR	GBR	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
HG00280	hp1	a0001	c0001	t0001	g0002	EUR	FIN	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
HG00323	hp1	a0001	c0001	t0001	g0001	EUR	FIN	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
HG00323	hp2	a0001	c0001	t0001	g0002	EUR	FIN	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
HG00597	hp1	a0001	c0001	t0001	g0001	EAS	CHS	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
HG00597	hp2	a0001	c0001	t0001	g0001	EAS	CHS	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
HG00609	hp1	a0001	c0001	t0001	g0001	EAS	CHS	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
HG00621	hp1	a0001	c0001	t0001	g0001	EAS	CHS	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
HG00639	hp1	a0001	c0001	t0001	g0002	AMR	PUR	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
HG00639	hp2	a0001	c0001	t0001	g0001	AMR	PUR	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
HG00642	hp1	a0001	c0001	t0001	g0001	AMR	PUR	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
HG00673	hp1	a0001	c0001	t0001	g0001	EAS	CHS	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
HG00733	hp1	a0001	c0001	t0001	g0003	AMR	PUR	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
HG00733	hp2	a0001	c0001	t0001	g0001	AMR	PUR	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
HG00735	hp1	a0001	c0001	t0001	g0002	AMR	PUR	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
HG00735	hp2	a0001	c0001	t0001	g0001	AMR	PUR	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
HG00738	hp1	a0001	c0001	t0001	g0001	AMR	PUR	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
HG00741	hp1	a0001	c0001	t0001	g0002	AMR	PUR	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
HG00741	hp2	a0001	c0001	t0001	g0001	AMR	PUR	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
HG01069	hp1	a0001	c0001	t0001	g0003	AMR	PUR	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
HG01070	hp1	a0001	c0001	t0001	g0003	AMR	PUR	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
HG01070	hp2	a0001	c0001	t0001	g0001	AMR	PUR	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
HG01071	hp1	a0001	c0001	t0001	g0001	AMR	PUR	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
HG01071	hp2	a0001	c0001	t0001	g0003	AMR	PUR	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
HG01074	hp1	a0001	c0001	t0001	g0008	AMR	PUR	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
HG01081	hp1	a0001	c0001	t0001	g0001	AMR	PUR	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
HG01081	hp2	a0001	c0001	t0001	g0001	AMR	PUR	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
HG01099	hp1	a0001	c0001	t0001	g0001	AMR	PUR	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
HG01106	hp1	a0001	c0001	t0001	g0001	AMR	PUR	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
HG01109	hp1	a0001	c0001	t0001	g0003	AMR	PUR	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
HG01167	hp1	a0001	c0001	t0001	g0001	AMR	PUR	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
HG01169	hp1	a0001	c0001	t0001	g0002	AMR	PUR	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
HG01169	hp2	a0001	c0001	t0001	g0001	AMR	PUR	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
HG01175	hp1	a0001	c0001	t0001	g0001	AMR	PUR	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
HG01175	hp2	a0001	c0001	t0001	g0008	AMR	PUR	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
HG01192	hp1	a0001	c0001	t0001	g0018	AMR	PUR	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
HG01243	hp1	a0001	c0001	t0001	g0003	AMR	PUR	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
HG01256	hp1	a0001	c0001	t0001	g0001	AMR	CLM	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
HG01257	hp1	a0001	c0001	t0001	g0001	AMR	CLM	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
HG01257	hp2	a0001	c0001	t0001	g0002	AMR	CLM	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
HG01258	hp1	a0001	c0001	t0001	g0002	AMR	CLM	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
HG01261	hp1	a0001	c0001	t0001	g0001	AMR	CLM	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
HG01358	hp1	a0001	c0001	t0001	g0002	AMR	CLM	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
HG01361	hp1	a0001	c0001	t0001	g0001	AMR	CLM	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
HG01361	hp2	a0001	c0001	t0001	g0001	AMR	CLM	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
HG01433	hp1	a0001	c0001	t0001	g0002	AMR	CLM	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
HG01496	hp1	a0001	c0001	t0001	g0002	AMR	CLM	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
HG01496	hp2	a0001	c0001	t0001	g0001	AMR	CLM	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
HG01515	hp1	a0001	c0001	t0001	g0005	EUR	IBS	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
HG01517	hp1	a0001	c0001	t0001	g0005	EUR	IBS	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
HG01517	hp2	a0001	c0001	t0001	g0002	EUR	IBS	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
HG01884	hp1	a0001	c0001	t0001	g0001	AFR	ACB	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
HG01884	hp2	a0001	c0001	t0001	g0003	AFR	ACB	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
HG01891	hp1	a0001	c0001	t0001	g0001	AFR	ACB	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
HG01891	hp2	a0001	c0001	t0001	g0001	AFR	ACB	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
HG01928	hp1	a0001	c0001	t0001	g0002	AMR	PEL	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
HG01934	hp1	a0001	c0001	t0001	g0001	AMR	PEL	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
HG01943	hp1	a0001	c0001	t0001	g0002	AMR	PEL	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
HG01952	hp1	a0001	c0001	t0001	g0002	AMR	PEL	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
HG01975	hp1	a0001	c0001	t0001	g0001	AMR	PEL	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
HG01975	hp2	a0001	c0001	t0001	g0002	AMR	PEL	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
HG01978	hp1	a0001	c0001	t0001	g0001	AMR	PEL	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
HG01978	hp2	a0001	c0001	t0001	g0001	AMR	PEL	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
HG01981	hp1	a0001	c0001	t0001	g0001	AMR	PEL	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
HG01981	hp2	a0001	c0001	t0001	g0002	AMR	PEL	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
HG01993	hp1	a0001	c0001	t0001	g0001	AMR	PEL	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
HG01993	hp2	a0001	c0001	t0001	g0001	AMR	PEL	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
HG02004	hp1	a0001	c0001	t0001	g0002	AMR	PEL	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
HG02004	hp2	a0001	c0001	t0001	g0023	AMR	PEL	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
HG02015	hp1	a0001	c0001	t0001	g0001	EAS	KHV	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
HG02027	hp1	a0001	c0001	t0001	g0019	EAS	KHV	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
HG02040	hp1	a0001	c0001	t0001	g0001	EAS	KHV	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
HG02055	hp1	a0001	c0001	t0001	g0009	AFR	ACB	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
HG02056	hp1	a0001	c0001	t0001	g0001	EAS	KHV	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
HG02071	hp1	a0001	c0001	t0001	g0001	EAS	KHV	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
HG02074	hp1	a0001	c0001	t0001	g0001	EAS	KHV	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
HG02080	hp1	a0001	c0001	t0001	g0001	EAS	KHV	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
HG02080	hp2	a0001	c0001	t0001	g0002	EAS	KHV	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
HG02083	hp1	a0001	c0001	t0001	g0002	EAS	KHV	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
HG02129	hp1	a0001	c0001	t0001	g0001	EAS	KHV	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
HG02132	hp1	a0001	c0001	t0001	g0001	EAS	KHV	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
HG02135	hp1	a0001	c0001	t0001	g0001	EAS	KHV	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
HG02145	hp1	a0001	c0001	t0001	g0001	AFR	ACB	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
HG02148	hp1	a0001	c0001	t0001	g0001	AMR	PEL	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
HG02148	hp2	a0001	c0001	t0001	g0002	AMR	PEL	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
HG02155	hp1	a0001	c0001	t0001	g0002	EAS	CDX	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
HG02155	hp2	a0001	c0001	t0001	g0001	EAS	CDX	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
HG02165	hp1	a0001	c0001	t0001	g0002	EAS	CDX	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
HG02165	hp2	a0001	c0001	t0001	g0001	EAS	CDX	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
HG02257	hp1	a0001	c0001	t0001	g0002	AFR	ACB	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
HG02257	hp2	a0001	c0001	t0001	g0001	AFR	ACB	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
HG02258	hp1	a0001	c0001	t0001	g0007	AFR	ACB	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
HG02273	hp1	a0001	c0001	t0001	g0022	AMR	PEL	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
HG02273	hp2	a0001	c0001	t0001	g0001	AMR	PEL	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
HG02280	hp1	a0001	c0001	t0001	g0001	AFR	ACB	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
HG02280	hp2	a0001	c0001	t0001	g0003	AFR	ACB	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
HG02293	hp1	a0001	c0001	t0001	g0001	AMR	PEL	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
HG02293	hp2	a0001	c0001	t0001	g0001	AMR	PEL	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
HG02451	hp1	a0001	c0001	t0001	g0001	AFR	ACB	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
HG02451	hp2	a0001	c0001	t0001	g0001	AFR	ACB	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
HG02572	hp1	a0001	c0001	t0001	g0001	AFR	GWD	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
HG02602	hp1	a0001	c0001	t0001	g0001	SAS	PJL	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
HG02615	hp1	a0001	c0001	t0001	g0003	AFR	GWD	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
HG02615	hp2	a0001	c0001	t0001	g0003	AFR	GWD	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
HG02622	hp1	a0001	c0001	t0001	g0001	AFR	GWD	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
HG02622	hp2	a0001	c0001	t0001	g0001	AFR	GWD	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
HG02630	hp1	a0001	c0001	t0001	g0003	AFR	GWD	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
HG02630	hp2	a0001	c0001	t0001	g0003	AFR	GWD	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
HG02647	hp1	a0001	c0001	t0001	g0001	AFR	GWD	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
HG02698	hp1	a0001	c0001	t0001	g0002	SAS	PJL	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
HG02717	hp1	a0001	c0001	t0001	g0003	AFR	GWD	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
HG02735	hp1	a0001	c0001	t0001	g0001	SAS	PJL	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
HG02738	hp1	a0001	c0001	t0001	g0001	SAS	PJL	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
HG02818	hp1	a0001	c0001	t0001	g0004	AFR	GWD	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
HG02818	hp2	a0001	c0001	t0001	g0012	AFR	GWD	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
HG02895	hp1	a0001	c0001	t0001	g0001	AFR	GWD	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
HG02897	hp1	a0001	c0001	t0001	g0020	AFR	GWD	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
HG02897	hp2	a0001	c0001	t0001	g0001	AFR	GWD	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
HG02922	hp1	a0001	c0001	t0001	g0001	AFR	ESN	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
HG02922	hp2	a0001	c0001	t0001	g0001	AFR	ESN	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
HG02965	hp1	a0001	c0001	t0001	g0001	AFR	ESN	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
HG02976	hp1	a0001	c0001	t0001	g0001	AFR	ESN	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
HG02976	hp2	a0001	c0001	t0001	g0001	AFR	ESN	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
HG03017	hp1	a0001	c0001	t0001	g0001	SAS	PJL	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
HG03041	hp1	a0001	c0001	t0001	g0004	AFR	GWD	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
HG03041	hp2	a0001	c0001	t0001	g0001	AFR	GWD	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
HG03098	hp1	a0001	c0001	t0001	g0001	AFR	MSL	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
HG03130	hp1	a0001	c0001	t0001	g0001	AFR	ESN	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
HG03139	hp1	a0001	c0001	t0001	g0001	AFR	ESN	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
HG03195	hp1	a0001	c0001	t0001	g0001	AFR	ESN	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
HG03195	hp2	a0001	c0001	t0001	g0004	AFR	ESN	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
HG03209	hp1	a0001	c0001	t0001	g0004	AFR	MSL	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
HG03225	hp1	a0001	c0001	t0001	g0001	AFR	MSL	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
HG03239	hp1	a0001	c0001	t0001	g0014	SAS	PJL	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
HG03239	hp2	a0001	c0001	t0001	g0001	SAS	PJL	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
HG03453	hp1	a0001	c0001	t0001	g0016	AFR	MSL	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
HG03453	hp2	a0001	c0001	t0001	g0001	AFR	MSL	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
HG03486	hp1	a0001	c0001	t0001	g0003	AFR	MSL	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
HG03486	hp2	a0001	c0001	t0001	g0001	AFR	MSL	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
HG03490	hp1	a0001	c0001	t0001	g0001	SAS	PJL	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
HG03492	hp1	a0001	c0001	t0001	g0001	SAS	PJL	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
HG03516	hp1	a0001	c0001	t0001	g0001	AFR	ESN	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
HG03516	hp2	a0001	c0001	t0001	g0001	AFR	ESN	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
HG03579	hp1	a0001	c0001	t0001	g0003	AFR	MSL	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
HG03654	hp1	a0001	c0001	t0001	g0001	SAS	PJL	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
HG03669	hp1	a0001	c0001	t0001	g0002	SAS	PJL	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
HG03669	hp2	a0001	c0001	t0001	g0005	SAS	PJL	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
HG03688	hp1	a0001	c0001	t0001	g0001	SAS	STU	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
HG03710	hp1	a0001	c0001	t0001	g0001	SAS	PJL	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
HG03831	hp1	a0001	c0001	t0001	g0006	SAS	BEB	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
HG03831	hp2	a0001	c0001	t0001	g0006	SAS	BEB	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
HG03834	hp1	a0001	c0001	t0001	g0002	SAS	BEB	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
HG03834	hp2	a0001	c0001	t0001	g0001	SAS	BEB	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
HG03927	hp1	a0001	c0001	t0001	g0002	SAS	BEB	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
HG03927	hp2	a0001	c0001	t0001	g0001	SAS	BEB	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
HG03942	hp1	a0002	c0003	t0001	g0001	SAS	BEB	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
HG04115	hp1	a0001	c0001	t0001	g0001	SAS	STU	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
HG04184	hp1	a0001	c0001	t0001	g0002	SAS	BEB	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
HG04184	hp2	a0001	c0001	t0001	g0001	SAS	BEB	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
HG04199	hp1	a0002	c0003	t0001	g0001	SAS	STU	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
HG04204	hp1	a0001	c0001	t0001	g0002	SAS	STU	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
HG04228	hp1	a0001	c0001	t0001	g0001	SAS	STU	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
NA18522	hp1	a0001	c0001	t0001	g0001	AFR	YRI	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
NA18612	hp1	a0001	c0001	t0001	g0001	EAS	CHB	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
NA18747	hp1	a0001	c0001	t0001	g0001	EAS	CHB	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
NA18906	hp1	a0001	c0001	t0001	g0001	AFR	YRI	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
NA18906	hp2	a0001	c0001	t0001	g0003	AFR	YRI	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
NA18940	hp1	a0001	c0001	t0001	g0002	EAS	JPT	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
NA18941	hp1	a0001	c0001	t0001	g0001	EAS	JPT	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
NA18941	hp2	a0001	c0001	t0001	g0002	EAS	JPT	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
NA18943	hp1	a0001	c0001	t0001	g0001	EAS	JPT	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
NA18944	hp1	a0001	c0001	t0001	g0002	EAS	JPT	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
NA18945	hp1	a0001	c0002	t0001	g0001	EAS	JPT	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
NA18948	hp1	a0001	c0001	t0001	g0001	EAS	JPT	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
NA18949	hp1	a0001	c0001	t0001	g0002	EAS	JPT	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
NA18949	hp2	a0001	c0001	t0001	g0001	EAS	JPT	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
NA18950	hp1	a0001	c0001	t0001	g0001	EAS	JPT	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
NA18950	hp2	a0001	c0001	t0001	g0001	EAS	JPT	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
NA18952	hp1	a0001	c0001	t0001	g0001	EAS	JPT	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
NA18954	hp1	a0001	c0001	t0001	g0002	EAS	JPT	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
NA18954	hp2	a0001	c0001	t0001	g0001	EAS	JPT	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
NA18957	hp1	a0001	c0001	t0001	g0001	EAS	JPT	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
NA18957	hp2	a0001	c0001	t0001	g0001	EAS	JPT	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
NA18959	hp1	a0001	c0001	t0001	g0001	EAS	JPT	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
NA18960	hp1	a0001	c0001	t0001	g0002	EAS	JPT	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
NA18961	hp1	a0001	c0001	t0001	g0001	EAS	JPT	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
NA18962	hp1	a0001	c0001	t0001	g0001	EAS	JPT	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
NA18964	hp1	a0001	c0002	t0001	g0001	EAS	JPT	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
NA18964	hp2	a0001	c0001	t0001	g0001	EAS	JPT	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
NA18966	hp1	a0001	c0001	t0001	g0001	EAS	JPT	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
NA18967	hp1	a0001	c0001	t0001	g0001	EAS	JPT	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
NA18968	hp1	a0001	c0001	t0001	g0001	EAS	JPT	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
NA18968	hp2	a0001	c0001	t0001	g0001	EAS	JPT	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
NA18970	hp1	a0001	c0001	t0001	g0001	EAS	JPT	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
NA18971	hp1	a0001	c0001	t0001	g0001	EAS	JPT	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
NA18974	hp1	a0001	c0001	t0001	g0001	EAS	JPT	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
NA18977	hp1	a0001	c0001	t0001	g0002	EAS	JPT	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
NA18980	hp1	a0001	c0001	t0001	g0002	EAS	JPT	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
NA18980	hp2	a0001	c0001	t0001	g0001	EAS	JPT	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
NA18982	hp1	a0001	c0001	t0001	g0002	EAS	JPT	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
NA18983	hp1	a0001	c0001	t0001	g0001	EAS	JPT	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
NA18984	hp1	a0001	c0001	t0001	g0001	EAS	JPT	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
NA18985	hp1	a0001	c0001	t0001	g0001	EAS	JPT	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
NA18986	hp1	a0001	c0001	t0001	g0001	EAS	JPT	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
NA18987	hp1	a0001	c0001	t0001	g0001	EAS	JPT	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
NA18987	hp2	a0001	c0001	t0001	g0002	EAS	JPT	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
NA18988	hp1	a0001	c0001	t0001	g0001	EAS	JPT	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
NA18989	hp1	a0001	c0001	t0001	g0001	EAS	JPT	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
NA18990	hp1	a0001	c0001	t0001	g0001	EAS	JPT	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
NA18992	hp1	a0001	c0001	t0001	g0002	EAS	JPT	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
NA18992	hp2	a0001	c0001	t0001	g0001	EAS	JPT	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
NA18994	hp1	a0001	c0001	t0001	g0001	EAS	JPT	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
NA18995	hp1	a0001	c0001	t0001	g0001	EAS	JPT	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
NA18997	hp1	a0001	c0001	t0001	g0002	EAS	JPT	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
NA18997	hp2	a0001	c0001	t0001	g0001	EAS	JPT	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
NA18998	hp1	a0001	c0001	t0001	g0001	EAS	JPT	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
NA18998	hp2	a0001	c0001	t0001	g0002	EAS	JPT	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
NA19000	hp1	a0001	c0001	t0001	g0002	EAS	JPT	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
NA19003	hp1	a0001	c0001	t0001	g0001	EAS	JPT	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
NA19003	hp2	a0004	c0005	t0001	g0001	EAS	JPT	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
NA19004	hp1	a0001	c0001	t0001	g0001	EAS	JPT	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
NA19005	hp1	a0001	c0001	t0001	g0001	EAS	JPT	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
NA19006	hp1	a0001	c0001	t0001	g0001	EAS	JPT	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
NA19007	hp1	a0001	c0001	t0001	g0001	EAS	JPT	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
NA19009	hp1	a0001	c0001	t0001	g0017	EAS	JPT	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
NA19011	hp1	a0001	c0001	t0001	g0001	EAS	JPT	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
NA19011	hp2	a0001	c0001	t0001	g0001	EAS	JPT	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
NA19012	hp1	a0001	c0001	t0001	g0011	EAS	JPT	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
NA19030	hp1	a0001	c0001	t0001	g0001	AFR	LWK	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
NA19030	hp2	a0001	c0001	t0001	g0004	AFR	LWK	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
NA19043	hp1	a0001	c0001	t0001	g0004	AFR	LWK	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
NA19055	hp1	a0001	c0001	t0001	g0001	EAS	JPT	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
NA19056	hp1	a0001	c0001	t0001	g0001	EAS	JPT	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
NA19058	hp1	a0001	c0001	t0001	g0001	EAS	JPT	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
NA19060	hp1	a0001	c0002	t0001	g0001	EAS	JPT	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
NA19062	hp1	a0001	c0001	t0001	g0002	EAS	JPT	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
NA19063	hp1	a0001	c0002	t0001	g0001	EAS	JPT	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
NA19064	hp1	a0001	c0001	t0001	g0001	EAS	JPT	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
NA19064	hp2	a0001	c0001	t0001	g0001	EAS	JPT	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
NA19066	hp1	a0001	c0001	t0001	g0001	EAS	JPT	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
NA19067	hp1	a0001	c0001	t0001	g0001	EAS	JPT	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
NA19068	hp1	a0001	c0001	t0001	g0001	EAS	JPT	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
NA19070	hp1	a0001	c0001	t0001	g0001	EAS	JPT	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
NA19072	hp1	a0001	c0001	t0001	g0013	EAS	JPT	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
NA19075	hp1	a0001	c0001	t0001	g0001	EAS	JPT	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
NA19076	hp1	a0003	c0007	t0001	g0015	EAS	JPT	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
NA19078	hp1	a0001	c0006	t0001	g0002	EAS	JPT	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
NA19078	hp2	a0005	c0004	t0001	g0010	EAS	JPT	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
NA19079	hp1	a0001	c0001	t0001	g0001	EAS	JPT	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
NA19082	hp1	a0001	c0001	t0001	g0001	EAS	JPT	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
NA19083	hp1	a0001	c0001	t0001	g0001	EAS	JPT	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
NA19084	hp1	a0001	c0001	t0001	g0001	EAS	JPT	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
NA19084	hp2	a0001	c0001	t0001	g0002	EAS	JPT	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
NA19085	hp1	a0001	c0001	t0001	g0001	EAS	JPT	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
NA19086	hp1	a0001	c0001	t0001	g0001	EAS	JPT	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
NA19088	hp1	a0001	c0001	t0001	g0001	EAS	JPT	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
NA19089	hp1	a0001	c0001	t0001	g0021	EAS	JPT	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
NA19091	hp1	a0001	c0001	t0001	g0001	EAS	JPT	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
NA19240	hp1	a0001	c0001	t0001	g0001	AFR	YRI	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
NA19240	hp2	a0001	c0001	t0001	g0001	AFR	YRI	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
NA20129	hp1	a0001	c0001	t0001	g0001	AFR	ASW	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
NA20129	hp2	a0001	c0001	t0001	g0001	AFR	ASW	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
NA20752	hp1	a0001	c0001	t0001	g0002	EUR	TSI	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
NA20805	hp1	a0001	c0001	t0001	g0002	EUR	TSI	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
NA20905	hp1	a0001	c0001	t0001	g0002	SAS	GIH	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
HG01123	hp1	a0001	c0001	t0001	g0001	AMR	CLM	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
HG01123	hp2	a0001	c0001	t0001	g0001	AMR	CLM	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
HG02109	hp1	a0001	c0001	t0001	g0001	AFR	ACB	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
HG02109	hp2	a0001	c0001	t0001	g0009	AFR	ACB	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
HG02486	hp1	a0001	c0001	t0001	g0002	AFR	ACB	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
HG02559	hp1	a0001	c0001	t0001	g0003	AFR	ACB	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
HG02559	hp2	a0001	c0001	t0001	g0003	AFR	ACB	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
HG03471	hp1	a0001	c0001	t0001	g0001	AFR	MSL	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
HG06807	hp1	a0001	c0001	t0001	g0003	AFR	USA	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
HG06807	hp2	a0001	c0001	t0001	g0001	AFR	USA	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
NA18955	hp1	a0001	c0001	t0001	g0002	EAS	JPT	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
NA20300	hp1	a0001	c0001	t0001	g0003	AFR	USA	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
NA20300	hp2	a0001	c0001	t0001	g0001	AFR	USA	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
NA21309	hp1	a0001	c0001	t0001	g0007	AFR	LWK	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
NA21309	hp2	a0001	c0001	t0001	g0001	AFR	LWK	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
homoSapiens_chm13v2	hp1	a0001	c0001	t0001	g0002	REF	REF	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464
homoSapiens_grch38	hp1	a0001	c0001	t0001	g0001	REF	REF	MAGEB17_chrX_16162481_16176464	MAGEB17	chrX	16162481	16176464

chr:pos	ref	alt	# # of ahapid:amino-acid(protein) level	ahapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	hgvs_p	genename	geneid	featuretype	featureid	transcript_biotype	rank	cdna cdna pos length	cds cds pos length	aa aa pos length	status	chr	pos
chrX:16170385	GC GC	G G	1	a0003 a0003	1	NA19076.hp1 NA19076.hp1	frameshift_variant	HIGH	c.5delC c.5delC	p.Pro2fs p.Pro2fs	MAGEB17	ENSG00000182798.10	transcript	ENST00000400004.6	protein_coding	2/2	357/1434	5/1011	2/336	INFO_REALIGN_3_PRIME	chrX	16170385
chrX:16170441	G G	A A	1	a0002 a0002	2	HG03942.hp1 HG04199.hp1 HG03942.hp1 HG04199.hp1	missense_variant	MODERATE	c.59G>A c.59G>A	p.Gly20Asp p.Gly20Asp	MAGEB17	ENSG00000182798.10	transcript	ENST00000400004.6	protein_coding	2/2	411/1434	59/1011	20/336		chrX	16170441
chrX:16170457	C C	CA CA	1	a0003 a0003	1	NA19076.hp1 NA19076.hp1	frameshift_variant	HIGH	c.75_76insA c.75_76insA	p.Gly26fs p.Gly26fs	MAGEB17	ENSG00000182798.10	transcript	ENST00000400004.6	protein_coding	2/2	428/1434	76/1011	26/336		chrX	16170457
chrX:16170488	G G	GA GA	1	a0003 a0003	1	NA19076.hp1 NA19076.hp1	frameshift_variant	HIGH	c.110dupA c.110dupA	p.Leu38fs p.Leu38fs	MAGEB17	ENSG00000182798.10	transcript	ENST00000400004.6	protein_coding	2/2	463/1434	111/1011	37/336	INFO_REALIGN_3_PRIME	chrX	16170488
chrX:16170556	T T	TC TC	1	a0005 a0005	1	NA19078.hp2 NA19078.hp2	frameshift_variant	HIGH	c.176dupC c.176dupC	p.Gln60fs p.Gln60fs	MAGEB17	ENSG00000182798.10	transcript	ENST00000400004.6	protein_coding	2/2	529/1434	177/1011	59/336	INFO_REALIGN_3_PRIME	chrX	16170556
chrX:16170655	T T	TC TC	1	a0003 a0003	1	NA19076.hp1 NA19076.hp1	frameshift_variant	HIGH	c.276dupC c.276dupC	p.Asn93fs p.Asn93fs	MAGEB17	ENSG00000182798.10	transcript	ENST00000400004.6	protein_coding	2/2	629/1434	277/1011	93/336	INFO_REALIGN_3_PRIME	chrX	16170655
chrX:16170694	AG AG	A A	1	a0003 a0003	1	NA19076.hp1 NA19076.hp1	frameshift_variant	HIGH	c.314delG c.314delG	p.Gly105fs p.Gly105fs	MAGEB17	ENSG00000182798.10	transcript	ENST00000400004.6	protein_coding	2/2	666/1434	314/1011	105/336	INFO_REALIGN_3_PRIME	chrX	16170694
chrX:16170704	CT CT	C C	1	a0003 a0003	1	NA19076.hp1 NA19076.hp1	frameshift_variant	HIGH	c.324delT c.324delT	p.Leu109fs p.Leu109fs	MAGEB17	ENSG00000182798.10	transcript	ENST00000400004.6	protein_coding	2/2	676/1434	324/1011	108/336	INFO_REALIGN_3_PRIME	chrX	16170704
chrX:16170891	AC AC	A A	1	a0003 a0003	1	NA19076.hp1 NA19076.hp1	frameshift_variant	HIGH	c.513delC c.513delC	p.Ser172fs p.Ser172fs	MAGEB17	ENSG00000182798.10	transcript	ENST00000400004.6	protein_coding	2/2	865/1434	513/1011	171/336	INFO_REALIGN_3_PRIME	chrX	16170891
chrX:16170973	C C	CT CT	1	a0004 a0004	1	NA19003.hp2 NA19003.hp2	frameshift_variant	HIGH	c.591_592insT c.591_592insT	p.Leu198fs p.Leu198fs	MAGEB17	ENSG00000182798.10	transcript	ENST00000400004.6	protein_coding	2/2	944/1434	592/1011	198/336		chrX	16170973
chrX:16171105	GC GC	G G	1	a0003 a0003	1	NA19076.hp1 NA19076.hp1	frameshift_variant	HIGH	c.727delC c.727delC	p.Gln243fs p.Gln243fs	MAGEB17	ENSG00000182798.10	transcript	ENST00000400004.6	protein_coding	2/2	1079/1434	727/1011	243/336	INFO_REALIGN_3_PRIME	chrX	16171105
chrX:16171149	TG TG	T T	1	a0003 a0003	1	NA19076.hp1 NA19076.hp1	frameshift_variant	HIGH	c.769delG c.769delG	p.Glu257fs p.Glu257fs	MAGEB17	ENSG00000182798.10	transcript	ENST00000400004.6	protein_coding	2/2	1121/1434	769/1011	257/336	INFO_REALIGN_3_PRIME	chrX	16171149
chrX:16171274	G G	GC GC	1	a0003 a0003	1	NA19076.hp1 NA19076.hp1	frameshift_variant	HIGH	c.894dupC c.894dupC	p.Ser299fs p.Ser299fs	MAGEB17	ENSG00000182798.10	transcript	ENST00000400004.6	protein_coding	2/2	1247/1434	895/1011	299/336	INFO_REALIGN_3_PRIME	chrX	16171274

chr:pos	ref	alt	# # of chapid	chapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	hgvs_p	genename	geneid	featuretype	featureid	transcript_biotype	rank	cdna cdna pos length	cds cds pos length	aa aa pos length	distance	status	chr	pos
chrX:16170409	C C	T T	1	a0001c0006 a0001c0006	1	NA19078.hp1 NA19078.hp1	synonymous_variant	LOW	c.27C>T c.27C>T	p.Arg9Arg p.Arg9Arg	MAGEB17	ENSG00000182798.10	transcript	ENST00000400004.6	protein_coding	2/2	379/1434	27/1011	9/336			chrX	16170409
chrX:16170973	C C	T T	1	a0001c0002 a0001c0002	4	NA18945.hp1 NA18964.hp1 NA19060.hp1 others(1): Show NA18945.hp1 NA18964.hp1 NA19060.hp1 NA19063.hp1	synonymous_variant	LOW	c.591C>T c.591C>T	p.Pro197Pro p.Pro197Pro	MAGEB17	ENSG00000182798.10	transcript	ENST00000400004.6	protein_coding	2/2	943/1434	591/1011	197/336			chrX	16170973

chr:pos	ref	alt	# # of thapid:transcript level	thapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	hgvs_p	genename	geneid	featuretype	featureid	transcript_biotype	rank	cdna cdna pos length	cds cds pos length	aa aa pos length	distance	status	chr	pos

chr:pos	ref	alt	# # of ghapid:genebody level	ghapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	genename	geneid	featuretype	featureid	genebody_biotype	rank	status	chr	pos
chrX:16167790	A A	AC AC	1	a0005c0004t0001g0010 a0005c0004t0001g0010	1	NA19078.hp2 NA19078.hp2	intron_variant	MODIFIER	c.-50+10dupC c.-50+10dupC	MAGEB17	ENSG00000182798.10	transcript	ENST00000400004.6	protein_coding	1/1	INFO_REALIGN_3_PRIME	chrX	16167790
chrX:16167815	A A	AC AC	1	a0005c0004t0001g0010 a0005c0004t0001g0010	1	NA19078.hp2 NA19078.hp2	intron_variant	MODIFIER	c.-50+34dupC c.-50+34dupC	MAGEB17	ENSG00000182798.10	transcript	ENST00000400004.6	protein_coding	1/1	INFO_REALIGN_3_PRIME	chrX	16167815
chrX:16168061	C C	T T	1	a0001c0001t0001g0023 a0001c0001t0001g0023	1	HG02004.hp2 HG02004.hp2	intron_variant	MODIFIER	c.-50+278C>T c.-50+278C>T	MAGEB17	ENSG00000182798.10	transcript	ENST00000400004.6	protein_coding	1/1		chrX	16168061
chrX:16168086	T T	C C	1	a0001c0001t0001g0006 a0001c0001t0001g0006	2	HG03831.hp1 HG03831.hp2 HG03831.hp1 HG03831.hp2	intron_variant	MODIFIER	c.-50+303T>C c.-50+303T>C	MAGEB17	ENSG00000182798.10	transcript	ENST00000400004.6	protein_coding	1/1		chrX	16168086
chrX:16168316	C C	T T	1	a0001c0001t0001g0022 a0001c0001t0001g0022	1	HG02273.hp1 HG02273.hp1	intron_variant	MODIFIER	c.-50+533C>T c.-50+533C>T	MAGEB17	ENSG00000182798.10	transcript	ENST00000400004.6	protein_coding	1/1		chrX	16168316
chrX:16168331	C C	T T	1	a0001c0001t0001g0009 a0001c0001t0001g0009	2	HG02055.hp1 HG02109.hp2 HG02055.hp1 HG02109.hp2	intron_variant	MODIFIER	c.-50+548C>T c.-50+548C>T	MAGEB17	ENSG00000182798.10	transcript	ENST00000400004.6	protein_coding	1/1		chrX	16168331
chrX:16168347	G G	GA GA	11	a0001c0001t0001g0002 a0001c0001t0001g0003 a0001c0001t0001g0004 others(8): Show a0001c0001t0001g0002 a0001c0001t0001g0003 a0001c0001t0001g0004 a0001c0001t0001g0006 a0001c0001t0001g0009 a0001c0001t0001g0012 a0001c0001t0001g0013 a0001c0001t0001g0014 a0001c0001t0001g0016 a0001c0006t0001g0002 a0003c0007t0001g0015	88	HG00280.hp1 HG00323.hp2 HG00639.hp1 others(85): Show HG00280.hp1 HG00323.hp2 HG00639.hp1 HG00733.hp1 HG00735.hp1 HG00741.hp1 HG01069.hp1 HG01070.hp1 HG01071.hp2 HG01109.hp1 HG01169.hp1 HG01243.hp1 HG01257.hp2 HG01258.hp1 HG01358.hp1 HG01433.hp1 HG01496.hp1 HG01517.hp2 HG01884.hp2 HG01928.hp1 HG01943.hp1 HG01952.hp1 HG01975.hp2 HG01981.hp2 HG02004.hp1 HG02055.hp1 HG02080.hp2 HG02083.hp1 HG02109.hp2 HG02148.hp2 HG02155.hp1 HG02165.hp1 HG02257.hp1 HG02280.hp2 HG02486.hp1 HG02559.hp1 HG02559.hp2 HG02615.hp1 HG02615.hp2 HG02630.hp1 HG02630.hp2 HG02698.hp1 HG02717.hp1 HG02818.hp1 HG02818.hp2 HG03041.hp1 HG03195.hp2 HG03209.hp1 HG03239.hp1 HG03453.hp1 HG03486.hp1 HG03579.hp1 HG03669.hp1 HG03831.hp1 HG03831.hp2 HG03834.hp1 HG03927.hp1 HG04184.hp1 HG04204.hp1 HG06807.hp1 NA18906.hp2 NA18940.hp1 NA18941.hp2 NA18944.hp1 NA18949.hp1 NA18954.hp1 NA18955.hp1 NA18960.hp1 NA18977.hp1 NA18980.hp1 NA18982.hp1 NA18987.hp2 NA18992.hp1 NA18997.hp1 NA18998.hp2 NA19000.hp1 NA19030.hp2 NA19043.hp1 NA19062.hp1 NA19072.hp1 NA19076.hp1 NA19078.hp1 NA19084.hp2 NA20300.hp1 NA20752.hp1 NA20805.hp1 NA20905.hp1 homoSapiens_chm13v2.hp1	intron_variant	MODIFIER	c.-50+578dupA c.-50+578dupA	MAGEB17	ENSG00000182798.10	transcript	ENST00000400004.6	protein_coding	1/1	INFO_REALIGN_3_PRIME	chrX	16168347
chrX:16168347	G G	GAA GAA	1	a0001c0001t0001g0011 a0001c0001t0001g0011	1	NA19012.hp1 NA19012.hp1	intron_variant	MODIFIER	c.-50+577_-50+578dup others(2): Show c.-50+577_-50+578dupAA	MAGEB17	ENSG00000182798.10	transcript	ENST00000400004.6	protein_coding	1/1	INFO_REALIGN_3_PRIME	chrX	16168347
chrX:16168353	A A	G G	1	a0001c0001t0001g0021 a0001c0001t0001g0021	1	NA19089.hp1 NA19089.hp1	intron_variant	MODIFIER	c.-50+570A>G c.-50+570A>G	MAGEB17	ENSG00000182798.10	transcript	ENST00000400004.6	protein_coding	1/1		chrX	16168353
chrX:16168491	A A	G G	2	a0001c0001t0001g0003 a0001c0001t0001g0016 a0001c0001t0001g0003 a0001c0001t0001g0016	21	HG00733.hp1 HG01069.hp1 HG01070.hp1 others(18): Show HG00733.hp1 HG01069.hp1 HG01070.hp1 HG01071.hp2 HG01109.hp1 HG01243.hp1 HG01884.hp2 HG02280.hp2 HG02559.hp1 HG02559.hp2 HG02615.hp1 HG02615.hp2 HG02630.hp1 HG02630.hp2 HG02717.hp1 HG03453.hp1 HG03486.hp1 HG03579.hp1 HG06807.hp1 NA18906.hp2 NA20300.hp1	intron_variant	MODIFIER	c.-50+708A>G c.-50+708A>G	MAGEB17	ENSG00000182798.10	transcript	ENST00000400004.6	protein_coding	1/1		chrX	16168491
chrX:16168505	G G	A A	2	a0001c0001t0001g0003 a0001c0001t0001g0016 a0001c0001t0001g0003 a0001c0001t0001g0016	21	HG00733.hp1 HG01069.hp1 HG01070.hp1 others(18): Show HG00733.hp1 HG01069.hp1 HG01070.hp1 HG01071.hp2 HG01109.hp1 HG01243.hp1 HG01884.hp2 HG02280.hp2 HG02559.hp1 HG02559.hp2 HG02615.hp1 HG02615.hp2 HG02630.hp1 HG02630.hp2 HG02717.hp1 HG03453.hp1 HG03486.hp1 HG03579.hp1 HG06807.hp1 NA18906.hp2 NA20300.hp1	intron_variant	MODIFIER	c.-50+722G>A c.-50+722G>A	MAGEB17	ENSG00000182798.10	transcript	ENST00000400004.6	protein_coding	1/1		chrX	16168505
chrX:16168572	C C	T T	2	a0001c0001t0001g0003 a0001c0001t0001g0016 a0001c0001t0001g0003 a0001c0001t0001g0016	21	HG00733.hp1 HG01069.hp1 HG01070.hp1 others(18): Show HG00733.hp1 HG01069.hp1 HG01070.hp1 HG01071.hp2 HG01109.hp1 HG01243.hp1 HG01884.hp2 HG02280.hp2 HG02559.hp1 HG02559.hp2 HG02615.hp1 HG02615.hp2 HG02630.hp1 HG02630.hp2 HG02717.hp1 HG03453.hp1 HG03486.hp1 HG03579.hp1 HG06807.hp1 NA18906.hp2 NA20300.hp1	intron_variant	MODIFIER	c.-50+789C>T c.-50+789C>T	MAGEB17	ENSG00000182798.10	transcript	ENST00000400004.6	protein_coding	1/1		chrX	16168572
chrX:16168689	T T	TC TC	1	a0005c0004t0001g0010 a0005c0004t0001g0010	1	NA19078.hp2 NA19078.hp2	intron_variant	MODIFIER	c.-50+908dupC c.-50+908dupC	MAGEB17	ENSG00000182798.10	transcript	ENST00000400004.6	protein_coding	1/1	INFO_REALIGN_3_PRIME	chrX	16168689
chrX:16168704	C C	G G	5	a0001c0001t0001g0002 a0001c0001t0001g0011 a0001c0001t0001g0014 others(2): Show a0001c0001t0001g0002 a0001c0001t0001g0011 a0001c0001t0001g0014 a0001c0006t0001g0002 a0003c0007t0001g0015	56	HG00280.hp1 HG00323.hp2 HG00639.hp1 others(53): Show HG00280.hp1 HG00323.hp2 HG00639.hp1 HG00735.hp1 HG00741.hp1 HG01169.hp1 HG01257.hp2 HG01258.hp1 HG01358.hp1 HG01433.hp1 HG01496.hp1 HG01517.hp2 HG01928.hp1 HG01943.hp1 HG01952.hp1 HG01975.hp2 HG01981.hp2 HG02004.hp1 HG02080.hp2 HG02083.hp1 HG02148.hp2 HG02155.hp1 HG02165.hp1 HG02257.hp1 HG02486.hp1 HG02698.hp1 HG03239.hp1 HG03669.hp1 HG03834.hp1 HG03927.hp1 HG04184.hp1 HG04204.hp1 NA18940.hp1 NA18941.hp2 NA18944.hp1 NA18949.hp1 NA18954.hp1 NA18955.hp1 NA18960.hp1 NA18977.hp1 NA18980.hp1 NA18982.hp1 NA18987.hp2 NA18992.hp1 NA18997.hp1 NA18998.hp2 NA19000.hp1 NA19012.hp1 NA19062.hp1 NA19076.hp1 NA19078.hp1 NA19084.hp2 NA20752.hp1 NA20805.hp1 NA20905.hp1 homoSapiens_chm13v2.hp1	intron_variant	MODIFIER	c.-50+921C>G c.-50+921C>G	MAGEB17	ENSG00000182798.10	transcript	ENST00000400004.6	protein_coding	1/1		chrX	16168704
chrX:16168874	G G	A A	1	a0001c0001t0001g0014 a0001c0001t0001g0014	1	HG03239.hp1 HG03239.hp1	intron_variant	MODIFIER	c.-50+1091G>A c.-50+1091G>A	MAGEB17	ENSG00000182798.10	transcript	ENST00000400004.6	protein_coding	1/1		chrX	16168874
chrX:16168910	T T	TA TA	10	a0001c0001t0001g0002 a0001c0001t0001g0004 a0001c0001t0001g0006 others(7): Show a0001c0001t0001g0002 a0001c0001t0001g0004 a0001c0001t0001g0006 a0001c0001t0001g0009 a0001c0001t0001g0011 a0001c0001t0001g0012 a0001c0001t0001g0014 a0001c0001t0001g0017 a0001c0006t0001g0002 a0003c0007t0001g0015	68	HG00280.hp1 HG00323.hp2 HG00639.hp1 others(65): Show HG00280.hp1 HG00323.hp2 HG00639.hp1 HG00735.hp1 HG00741.hp1 HG01169.hp1 HG01257.hp2 HG01258.hp1 HG01358.hp1 HG01433.hp1 HG01496.hp1 HG01517.hp2 HG01928.hp1 HG01943.hp1 HG01952.hp1 HG01975.hp2 HG01981.hp2 HG02004.hp1 HG02055.hp1 HG02080.hp2 HG02083.hp1 HG02109.hp2 HG02148.hp2 HG02155.hp1 HG02165.hp1 HG02257.hp1 HG02486.hp1 HG02698.hp1 HG02818.hp1 HG02818.hp2 HG03041.hp1 HG03195.hp2 HG03209.hp1 HG03239.hp1 HG03669.hp1 HG03831.hp1 HG03831.hp2 HG03834.hp1 HG03927.hp1 HG04184.hp1 HG04204.hp1 NA18940.hp1 NA18941.hp2 NA18944.hp1 NA18949.hp1 NA18954.hp1 NA18955.hp1 NA18960.hp1 NA18977.hp1 NA18980.hp1 NA18982.hp1 NA18987.hp2 NA18992.hp1 NA18997.hp1 NA18998.hp2 NA19000.hp1 NA19009.hp1 NA19012.hp1 NA19030.hp2 NA19043.hp1 NA19062.hp1 NA19076.hp1 NA19078.hp1 NA19084.hp2 NA20752.hp1 NA20805.hp1 NA20905.hp1 homoSapiens_chm13v2.hp1	intron_variant	MODIFIER	c.-50+1135dupA c.-50+1135dupA	MAGEB17	ENSG00000182798.10	transcript	ENST00000400004.6	protein_coding	1/1	INFO_REALIGN_3_PRIME	chrX	16168910
chrX:16168910	T T	TAA TAA	2	a0001c0001t0001g0003 a0001c0001t0001g0016 a0001c0001t0001g0003 a0001c0001t0001g0016	21	HG00733.hp1 HG01069.hp1 HG01070.hp1 others(18): Show HG00733.hp1 HG01069.hp1 HG01070.hp1 HG01071.hp2 HG01109.hp1 HG01243.hp1 HG01884.hp2 HG02280.hp2 HG02559.hp1 HG02559.hp2 HG02615.hp1 HG02615.hp2 HG02630.hp1 HG02630.hp2 HG02717.hp1 HG03453.hp1 HG03486.hp1 HG03579.hp1 HG06807.hp1 NA18906.hp2 NA20300.hp1	intron_variant	MODIFIER	c.-50+1134_-50+1135d others(4): Show c.-50+1134_-50+1135dupAA	MAGEB17	ENSG00000182798.10	transcript	ENST00000400004.6	protein_coding	1/1	INFO_REALIGN_3_PRIME	chrX	16168910
chrX:16168992	G G	A A	1	a0001c0001t0001g0007 a0001c0001t0001g0007	2	HG02258.hp1 NA21309.hp1 HG02258.hp1 NA21309.hp1	intron_variant	MODIFIER	c.-50+1209G>A c.-50+1209G>A	MAGEB17	ENSG00000182798.10	transcript	ENST00000400004.6	protein_coding	1/1		chrX	16168992
chrX:16168997	G G	A A	1	a0001c0001t0001g0018 a0001c0001t0001g0018	1	HG01192.hp1 HG01192.hp1	intron_variant	MODIFIER	c.-50+1214G>A c.-50+1214G>A	MAGEB17	ENSG00000182798.10	transcript	ENST00000400004.6	protein_coding	1/1		chrX	16168997
chrX:16169150	A A	AG AG	1	a0005c0004t0001g0010 a0005c0004t0001g0010	1	NA19078.hp2 NA19078.hp2	intron_variant	MODIFIER	c.-49-1180dupG c.-49-1180dupG	MAGEB17	ENSG00000182798.10	transcript	ENST00000400004.6	protein_coding	1/1	INFO_REALIGN_3_PRIME	chrX	16169150
chrX:16169227	C C	T T	1	a0001c0001t0001g0020 a0001c0001t0001g0020	1	HG02897.hp1 HG02897.hp1	intron_variant	MODIFIER	c.-49-1107C>T c.-49-1107C>T	MAGEB17	ENSG00000182798.10	transcript	ENST00000400004.6	protein_coding	1/1		chrX	16169227
chrX:16169281	T T	C C	1	a0001c0001t0001g0016 a0001c0001t0001g0016	1	HG03453.hp1 HG03453.hp1	intron_variant	MODIFIER	c.-49-1053T>C c.-49-1053T>C	MAGEB17	ENSG00000182798.10	transcript	ENST00000400004.6	protein_coding	1/1		chrX	16169281
chrX:16169375	G G	A A	2	a0001c0001t0001g0003 a0001c0001t0001g0016 a0001c0001t0001g0003 a0001c0001t0001g0016	21	HG00733.hp1 HG01069.hp1 HG01070.hp1 others(18): Show HG00733.hp1 HG01069.hp1 HG01070.hp1 HG01071.hp2 HG01109.hp1 HG01243.hp1 HG01884.hp2 HG02280.hp2 HG02559.hp1 HG02559.hp2 HG02615.hp1 HG02615.hp2 HG02630.hp1 HG02630.hp2 HG02717.hp1 HG03453.hp1 HG03486.hp1 HG03579.hp1 HG06807.hp1 NA18906.hp2 NA20300.hp1	intron_variant	MODIFIER	c.-49-959G>A c.-49-959G>A	MAGEB17	ENSG00000182798.10	transcript	ENST00000400004.6	protein_coding	1/1		chrX	16169375
chrX:16169474	G G	A A	1	a0001c0001t0001g0006 a0001c0001t0001g0006	2	HG03831.hp1 HG03831.hp2 HG03831.hp1 HG03831.hp2	intron_variant	MODIFIER	c.-49-860G>A c.-49-860G>A	MAGEB17	ENSG00000182798.10	transcript	ENST00000400004.6	protein_coding	1/1		chrX	16169474
chrX:16169487	A A	G G	1	a0001c0001t0001g0012 a0001c0001t0001g0012	1	HG02818.hp2 HG02818.hp2	intron_variant	MODIFIER	c.-49-847A>G c.-49-847A>G	MAGEB17	ENSG00000182798.10	transcript	ENST00000400004.6	protein_coding	1/1		chrX	16169487
chrX:16169562	A A	G G	5	a0001c0001t0001g0002 a0001c0001t0001g0011 a0001c0001t0001g0014 others(2): Show a0001c0001t0001g0002 a0001c0001t0001g0011 a0001c0001t0001g0014 a0001c0006t0001g0002 a0003c0007t0001g0015	56	HG00280.hp1 HG00323.hp2 HG00639.hp1 others(53): Show HG00280.hp1 HG00323.hp2 HG00639.hp1 HG00735.hp1 HG00741.hp1 HG01169.hp1 HG01257.hp2 HG01258.hp1 HG01358.hp1 HG01433.hp1 HG01496.hp1 HG01517.hp2 HG01928.hp1 HG01943.hp1 HG01952.hp1 HG01975.hp2 HG01981.hp2 HG02004.hp1 HG02080.hp2 HG02083.hp1 HG02148.hp2 HG02155.hp1 HG02165.hp1 HG02257.hp1 HG02486.hp1 HG02698.hp1 HG03239.hp1 HG03669.hp1 HG03834.hp1 HG03927.hp1 HG04184.hp1 HG04204.hp1 NA18940.hp1 NA18941.hp2 NA18944.hp1 NA18949.hp1 NA18954.hp1 NA18955.hp1 NA18960.hp1 NA18977.hp1 NA18980.hp1 NA18982.hp1 NA18987.hp2 NA18992.hp1 NA18997.hp1 NA18998.hp2 NA19000.hp1 NA19012.hp1 NA19062.hp1 NA19076.hp1 NA19078.hp1 NA19084.hp2 NA20752.hp1 NA20805.hp1 NA20905.hp1 homoSapiens_chm13v2.hp1	intron_variant	MODIFIER	c.-49-772A>G c.-49-772A>G	MAGEB17	ENSG00000182798.10	transcript	ENST00000400004.6	protein_coding	1/1		chrX	16169562
chrX:16169713	A A	G G	1	a0001c0001t0001g0019 a0001c0001t0001g0019	1	HG02027.hp1 HG02027.hp1	intron_variant	MODIFIER	c.-49-621A>G c.-49-621A>G	MAGEB17	ENSG00000182798.10	transcript	ENST00000400004.6	protein_coding	1/1		chrX	16169713
chrX:16169727	T T	TG TG	1	a0005c0004t0001g0010 a0005c0004t0001g0010	1	NA19078.hp2 NA19078.hp2	intron_variant	MODIFIER	c.-49-605dupG c.-49-605dupG	MAGEB17	ENSG00000182798.10	transcript	ENST00000400004.6	protein_coding	1/1	INFO_REALIGN_3_PRIME	chrX	16169727
chrX:16169732	AG AG	A A	1	a0003c0007t0001g0015 a0003c0007t0001g0015	1	NA19076.hp1 NA19076.hp1	intron_variant	MODIFIER	c.-49-599delG c.-49-599delG	MAGEB17	ENSG00000182798.10	transcript	ENST00000400004.6	protein_coding	1/1	INFO_REALIGN_3_PRIME	chrX	16169732
chrX:16169821	C C	G G	1	a0001c0001t0001g0005 a0001c0001t0001g0005	3	HG01515.hp1 HG01517.hp1 HG03669.hp2 HG01515.hp1 HG01517.hp1 HG03669.hp2	intron_variant	MODIFIER	c.-49-513C>G c.-49-513C>G	MAGEB17	ENSG00000182798.10	transcript	ENST00000400004.6	protein_coding	1/1		chrX	16169821
chrX:16169923	T T	TG TG	1	a0003c0007t0001g0015 a0003c0007t0001g0015	1	NA19076.hp1 NA19076.hp1	intron_variant	MODIFIER	c.-49-406dupG c.-49-406dupG	MAGEB17	ENSG00000182798.10	transcript	ENST00000400004.6	protein_coding	1/1	INFO_REALIGN_3_PRIME	chrX	16169923
chrX:16170196	C C	T T	1	a0001c0001t0001g0008 a0001c0001t0001g0008	2	HG01074.hp1 HG01175.hp2 HG01074.hp1 HG01175.hp2	intron_variant	MODIFIER	c.-49-138C>T c.-49-138C>T	MAGEB17	ENSG00000182798.10	transcript	ENST00000400004.6	protein_coding	1/1		chrX	16170196

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🧬 JoGo Online Haplotype Explorer MAGEB17_chrX_16162481_16176464

JoGo Local Haplotype Explorer (on iGV) MAGEB17_chrX_16162481_16176464

Translation Multiple Alignment View

🧬 Gene Summary

AAmino acid(protein) Level Haplotype Info (Total: 5)

CCoding Level Haplotype Info (Total: 7)

TTranscript Level Haplotype Info (Total: 1)

GGenebody Level Haplotype Info (Total: 23)

A C AC Level (Amino Acid + Coding) Haplotype Info (Total: 7)

A C T ACT Level (Amino Acid + Coding + Transcript) Haplotype Info (Total: 7)

A C T G ACTG Level (Amino Acid + Coding + Transcript + Genebody) Haplotype Info (Total: 27)

Haplotype Details by Sample (Haploid Level) (Total: 282)

AAmino acid(protein) Level Haplotype Related Variants (Effect to Protein Coding Variants) (Total: 13)

CCoding Level Variants (Synonymous Mutations) (Total: 2)

TTranscript Level Haplotype Variants (5'UTR+3'UTR) (Total: 0)

GGenebody Level Haplotype Variants (Intron) (Total: 32)

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Annotation (Repeats)

Annotation (SNP Array)