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geneid	257169
ensemblid	ENSG00000157653.12
hgncid	23570
symbol	C9orf43
name	chromosome 9 open reading frame 43
refseq_nuc	NM_001278629.2
refseq_prot	NP_001265558.1
ensembl_nuc	ENST00000374165.6
ensembl_prot	ENSP00000363280.1
mane_status	MANE Select
chr	chr9
start	113410747
end	113429690
strand	+
ver	v1.2
region	chr9:113410747-113429690
region5000	chr9:113405747-113434690
regionname0	C9orf43_chr9_113410747_113429690
regionname5000	C9orf43_chr9_113405747_113434690

ahapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	alen	total	AFR	AMR	EAS	EUR	SAS	JPT	regionname	genename	aa	chr	start	end
a0001	1/1	461	267	78	46	102	12	27	76	C9orf43_chr9_113405747_113434690	C9orf43	copy fasta	chr9	113405747	113434690
a0002	0/0	461	18	4	9	0	3	2	0	C9orf43_chr9_113405747_113434690	C9orf43	copy fasta	chr9	113405747	113434690
a0003	0/0	462	7	0	1	3	1	2	2	C9orf43_chr9_113405747_113434690	C9orf43	copy fasta	chr9	113405747	113434690
a0004	0/0	461	6	6	0	0	0	0	0	C9orf43_chr9_113405747_113434690	C9orf43	copy fasta	chr9	113405747	113434690
a0005	0/0	461	3	0	1	0	0	2	0	C9orf43_chr9_113405747_113434690	C9orf43	copy fasta	chr9	113405747	113434690
a0006	0/0	461	2	0	1	1	0	0	0	C9orf43_chr9_113405747_113434690	C9orf43	copy fasta	chr9	113405747	113434690
a0007	0/0	461	1	0	1	0	0	0	0	C9orf43_chr9_113405747_113434690	C9orf43	copy fasta	chr9	113405747	113434690
a0008	0/0	461	1	1	0	0	0	0	0	C9orf43_chr9_113405747_113434690	C9orf43	copy fasta	chr9	113405747	113434690
a0009	0/0	462	1	0	0	0	0	1	0	C9orf43_chr9_113405747_113434690	C9orf43	copy fasta	chr9	113405747	113434690
a0010	0/0	461	1	0	0	0	0	1	0	C9orf43_chr9_113405747_113434690	C9orf43	copy fasta	chr9	113405747	113434690
a0011	0/0	461	1	0	1	0	0	0	0	C9orf43_chr9_113405747_113434690	C9orf43	copy fasta	chr9	113405747	113434690
a0012	0/0	461	1	0	0	0	0	1	0	C9orf43_chr9_113405747_113434690	C9orf43	copy fasta	chr9	113405747	113434690
a0013	0/0	461	1	1	0	0	0	0	0	C9orf43_chr9_113405747_113434690	C9orf43	copy fasta	chr9	113405747	113434690

chapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	clen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	cseq	chr	start	end
c0001	1/1	1386	266	78	46	102	12	26	C9orf43_chr9_113405747_113434690	C9orf43	copy fasta	chr9	113405747	113434690
c0002	0/0	1386	18	4	9	0	3	2	C9orf43_chr9_113405747_113434690	C9orf43	copy fasta	chr9	113405747	113434690
c0003	0/0	1389	7	0	1	3	1	2	C9orf43_chr9_113405747_113434690	C9orf43	copy fasta	chr9	113405747	113434690
c0004	0/0	1386	6	6	0	0	0	0	C9orf43_chr9_113405747_113434690	C9orf43	copy fasta	chr9	113405747	113434690
c0005	0/0	1386	3	0	1	0	0	2	C9orf43_chr9_113405747_113434690	C9orf43	copy fasta	chr9	113405747	113434690
c0006	0/0	1386	2	0	1	1	0	0	C9orf43_chr9_113405747_113434690	C9orf43	copy fasta	chr9	113405747	113434690
c0007	0/0	1386	1	0	0	0	0	1	C9orf43_chr9_113405747_113434690	C9orf43	copy fasta	chr9	113405747	113434690
c0008	0/0	1386	1	0	1	0	0	0	C9orf43_chr9_113405747_113434690	C9orf43	copy fasta	chr9	113405747	113434690
c0009	0/0	1386	1	0	0	0	0	1	C9orf43_chr9_113405747_113434690	C9orf43	copy fasta	chr9	113405747	113434690
c0010	0/0	1386	1	0	1	0	0	0	C9orf43_chr9_113405747_113434690	C9orf43	copy fasta	chr9	113405747	113434690
c0011	0/0	1389	1	0	0	0	0	1	C9orf43_chr9_113405747_113434690	C9orf43	copy fasta	chr9	113405747	113434690
c0012	0/0	1386	1	1	0	0	0	0	C9orf43_chr9_113405747_113434690	C9orf43	copy fasta	chr9	113405747	113434690
c0013	0/0	1386	1	1	0	0	0	0	C9orf43_chr9_113405747_113434690	C9orf43	copy fasta	chr9	113405747	113434690
c0014	0/0	1386	1	0	0	0	0	1	C9orf43_chr9_113405747_113434690	C9orf43	copy fasta	chr9	113405747	113434690

thapid	grch38 chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	tlen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	tseq	chr	start	end
t0001	1/1	609	291	86	58	99	15	31	C9orf43_chr9_113405747_113434690	C9orf43	copy fasta	chr9	113405747	113434690
t0002	0/0	609	8	0	1	3	1	3	C9orf43_chr9_113405747_113434690	C9orf43	copy fasta	chr9	113405747	113434690
t0003	0/0	608	3	0	0	3	0	0	C9orf43_chr9_113405747_113434690	C9orf43	copy fasta	chr9	113405747	113434690
t0004	0/0	609	3	3	0	0	0	0	C9orf43_chr9_113405747_113434690	C9orf43	copy fasta	chr9	113405747	113434690
t0005	0/0	609	2	1	0	0	0	1	C9orf43_chr9_113405747_113434690	C9orf43	copy fasta	chr9	113405747	113434690
t0006	0/0	609	1	0	1	0	0	0	C9orf43_chr9_113405747_113434690	C9orf43	copy fasta	chr9	113405747	113434690
t0007	0/0	609	1	0	0	1	0	0	C9orf43_chr9_113405747_113434690	C9orf43	copy fasta	chr9	113405747	113434690
t0008	0/0	609	1	0	0	0	0	1	C9orf43_chr9_113405747_113434690	C9orf43	copy fasta	chr9	113405747	113434690

ghapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	chr	start	end
g0001	1/0	106	21	20	46	5	13	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
g0002	0/0	44	11	8	18	1	6	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
g0003	0/1	18	0	3	7	4	3	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
g0004	0/0	11	1	5	0	3	2	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
g0005	0/0	8	0	0	8	0	0	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
g0006	0/0	7	0	1	3	1	2	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
g0007	0/0	5	5	0	0	0	0	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
g0008	0/0	4	0	4	0	0	0	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
g0009	0/0	3	3	0	0	0	0	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
g0010	0/0	3	2	1	0	0	0	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
g0011	0/0	3	1	2	0	0	0	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
g0012	0/0	3	2	1	0	0	0	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
g0013	0/0	3	3	0	0	0	0	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
g0014	0/0	3	0	0	3	0	0	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
g0015	0/0	3	3	0	0	0	0	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
g0016	0/0	3	0	1	2	0	0	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
g0017	0/0	3	3	0	0	0	0	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
g0018	0/0	3	3	0	0	0	0	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
g0019	0/0	2	2	0	0	0	0	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
g0020	0/0	2	0	0	2	0	0	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
g0021	0/0	2	1	1	0	0	0	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
g0022	0/0	2	2	0	0	0	0	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
g0023	0/0	2	2	0	0	0	0	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
g0024	0/0	2	2	0	0	0	0	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
g0025	0/0	2	0	0	2	0	0	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
g0026	0/0	2	0	1	0	1	0	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
g0027	0/0	2	0	0	2	0	0	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
g0028	0/0	2	0	2	0	0	0	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
g0029	0/0	1	0	1	0	0	0	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
g0030	0/0	1	0	0	0	0	1	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
g0031	0/0	1	1	0	0	0	0	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
g0032	0/0	1	0	0	0	0	1	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
g0033	0/0	1	1	0	0	0	0	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
g0034	0/0	1	0	0	1	0	0	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
g0035	0/0	1	1	0	0	0	0	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
g0036	0/0	1	1	0	0	0	0	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
g0037	0/0	1	0	1	0	0	0	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
g0038	0/0	1	0	1	0	0	0	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
g0039	0/0	1	0	1	0	0	0	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
g0040	0/0	1	0	0	0	0	1	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
g0041	0/0	1	0	1	0	0	0	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
g0042	0/0	1	0	0	0	0	1	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
g0043	0/0	1	0	0	0	0	1	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
g0044	0/0	1	1	0	0	0	0	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
g0045	0/0	1	0	1	0	0	0	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
g0046	0/0	1	0	0	1	0	0	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
g0047	0/0	1	1	0	0	0	0	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
g0048	0/0	1	1	0	0	0	0	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
g0049	0/0	1	0	1	0	0	0	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
g0050	0/0	1	0	0	0	1	0	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
g0051	0/0	1	1	0	0	0	0	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
g0052	0/0	1	0	0	1	0	0	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
g0053	0/0	1	0	0	1	0	0	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
g0054	0/0	1	0	1	0	0	0	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
g0055	0/0	1	0	0	0	0	1	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
g0056	0/0	1	0	0	0	0	1	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
g0057	0/0	1	0	0	1	0	0	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
g0058	0/0	1	1	0	0	0	0	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
g0059	0/0	1	0	1	0	0	0	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
g0060	0/0	1	0	0	1	0	0	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
g0061	0/0	1	0	0	1	0	0	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
g0062	0/0	1	1	0	0	0	0	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
g0063	0/0	1	1	0	0	0	0	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
g0064	0/0	1	0	0	1	0	0	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
g0065	0/0	1	1	0	0	0	0	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
g0066	0/0	1	0	1	0	0	0	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
g0067	0/0	1	0	0	1	0	0	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
g0068	0/0	1	0	0	0	0	1	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
g0069	0/0	1	1	0	0	0	0	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
g0070	0/0	1	1	0	0	0	0	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
g0071	0/0	1	0	0	1	0	0	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
g0072	0/0	1	1	0	0	0	0	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
g0073	0/0	1	1	0	0	0	0	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
g0074	0/0	1	1	0	0	0	0	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
g0075	0/0	1	0	0	1	0	0	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
g0076	0/0	1	0	0	1	0	0	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
g0077	0/0	1	0	0	1	0	0	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
g0078	0/0	1	1	0	0	0	0	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
g0079	0/0	1	1	0	0	0	0	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
g0080	0/0	1	1	0	0	0	0	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
g0081	0/0	1	0	0	0	0	1	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
g0082	0/0	1	1	0	0	0	0	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
g0083	0/0	1	1	0	0	0	0	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
g0084	0/0	1	0	0	0	0	1	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
g0085	0/0	1	1	0	0	0	0	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690

achapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	clen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	cseq	chr	start	end
a0001c0001	1/1	1386	266	78	46	102	12	26	C9orf43_chr9_113405747_113434690	C9orf43	copy fasta	chr9	113405747	113434690
a0001c0014	0/0	1386	1	0	0	0	0	1	C9orf43_chr9_113405747_113434690	C9orf43	copy fasta	chr9	113405747	113434690
a0002c0002	0/0	1386	18	4	9	0	3	2	C9orf43_chr9_113405747_113434690	C9orf43	copy fasta	chr9	113405747	113434690
a0003c0003	0/0	1389	7	0	1	3	1	2	C9orf43_chr9_113405747_113434690	C9orf43	copy fasta	chr9	113405747	113434690
a0004c0004	0/0	1386	6	6	0	0	0	0	C9orf43_chr9_113405747_113434690	C9orf43	copy fasta	chr9	113405747	113434690
a0005c0005	0/0	1386	3	0	1	0	0	2	C9orf43_chr9_113405747_113434690	C9orf43	copy fasta	chr9	113405747	113434690
a0006c0006	0/0	1386	2	0	1	1	0	0	C9orf43_chr9_113405747_113434690	C9orf43	copy fasta	chr9	113405747	113434690
a0007c0008	0/0	1386	1	0	1	0	0	0	C9orf43_chr9_113405747_113434690	C9orf43	copy fasta	chr9	113405747	113434690
a0008c0012	0/0	1386	1	1	0	0	0	0	C9orf43_chr9_113405747_113434690	C9orf43	copy fasta	chr9	113405747	113434690
a0009c0011	0/0	1389	1	0	0	0	0	1	C9orf43_chr9_113405747_113434690	C9orf43	copy fasta	chr9	113405747	113434690
a0010c0009	0/0	1386	1	0	0	0	0	1	C9orf43_chr9_113405747_113434690	C9orf43	copy fasta	chr9	113405747	113434690
a0011c0010	0/0	1386	1	0	1	0	0	0	C9orf43_chr9_113405747_113434690	C9orf43	copy fasta	chr9	113405747	113434690
a0012c0007	0/0	1386	1	0	0	0	0	1	C9orf43_chr9_113405747_113434690	C9orf43	copy fasta	chr9	113405747	113434690
a0013c0013	0/0	1386	1	1	0	0	0	0	C9orf43_chr9_113405747_113434690	C9orf43	copy fasta	chr9	113405747	113434690

acthapid	grch38 chm13v2	tlen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	tseq	chr	start	end
a0001c0001t0001	1/1	1994	256	74	45	98	12	25	C9orf43_chr9_113405747_113434690	C9orf43	copy fasta	chr9	113405747	113434690
a0001c0001t0003	0/0	1993	3	0	0	3	0	0	C9orf43_chr9_113405747_113434690	C9orf43	copy fasta	chr9	113405747	113434690
a0001c0001t0004	0/0	1994	3	3	0	0	0	0	C9orf43_chr9_113405747_113434690	C9orf43	copy fasta	chr9	113405747	113434690
a0001c0001t0005	0/0	1994	2	1	0	0	0	1	C9orf43_chr9_113405747_113434690	C9orf43	copy fasta	chr9	113405747	113434690
a0001c0001t0006	0/0	1994	1	0	1	0	0	0	C9orf43_chr9_113405747_113434690	C9orf43	copy fasta	chr9	113405747	113434690
a0001c0001t0007	0/0	1994	1	0	0	1	0	0	C9orf43_chr9_113405747_113434690	C9orf43	copy fasta	chr9	113405747	113434690
a0001c0014t0001	0/0	1994	1	0	0	0	0	1	C9orf43_chr9_113405747_113434690	C9orf43	copy fasta	chr9	113405747	113434690
a0002c0002t0001	0/0	1994	18	4	9	0	3	2	C9orf43_chr9_113405747_113434690	C9orf43	copy fasta	chr9	113405747	113434690
a0003c0003t0002	0/0	1997	7	0	1	3	1	2	C9orf43_chr9_113405747_113434690	C9orf43	copy fasta	chr9	113405747	113434690
a0004c0004t0001	0/0	1994	6	6	0	0	0	0	C9orf43_chr9_113405747_113434690	C9orf43	copy fasta	chr9	113405747	113434690
a0005c0005t0001	0/0	1994	3	0	1	0	0	2	C9orf43_chr9_113405747_113434690	C9orf43	copy fasta	chr9	113405747	113434690
a0006c0006t0001	0/0	1994	2	0	1	1	0	0	C9orf43_chr9_113405747_113434690	C9orf43	copy fasta	chr9	113405747	113434690
a0007c0008t0001	0/0	1994	1	0	1	0	0	0	C9orf43_chr9_113405747_113434690	C9orf43	copy fasta	chr9	113405747	113434690
a0008c0012t0001	0/0	1994	1	1	0	0	0	0	C9orf43_chr9_113405747_113434690	C9orf43	copy fasta	chr9	113405747	113434690
a0009c0011t0002	0/0	1997	1	0	0	0	0	1	C9orf43_chr9_113405747_113434690	C9orf43	copy fasta	chr9	113405747	113434690
a0010c0009t0001	0/0	1994	1	0	0	0	0	1	C9orf43_chr9_113405747_113434690	C9orf43	copy fasta	chr9	113405747	113434690
a0011c0010t0001	0/0	1994	1	0	1	0	0	0	C9orf43_chr9_113405747_113434690	C9orf43	copy fasta	chr9	113405747	113434690
a0012c0007t0008	0/0	1994	1	0	0	0	0	1	C9orf43_chr9_113405747_113434690	C9orf43	copy fasta	chr9	113405747	113434690
a0013c0013t0001	0/0	1994	1	1	0	0	0	0	C9orf43_chr9_113405747_113434690	C9orf43	copy fasta	chr9	113405747	113434690

actghapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	chr	start	end
a0001c0001t0001g0001	1/0	99	21	19	43	5	10	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
a0001c0001t0001g0002	0/0	43	11	8	18	1	5	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
a0001c0001t0001g0003	0/1	17	0	3	7	4	2	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
a0001c0001t0001g0005	0/0	8	0	0	8	0	0	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
a0001c0001t0001g0007	0/0	5	5	0	0	0	0	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
a0001c0001t0001g0008	0/0	4	0	4	0	0	0	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
a0001c0001t0001g0009	0/0	3	3	0	0	0	0	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
a0001c0001t0001g0010	0/0	2	2	0	0	0	0	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
a0001c0001t0001g0014	0/0	1	0	0	1	0	0	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
a0001c0001t0001g0015	0/0	3	3	0	0	0	0	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
a0001c0001t0001g0016	0/0	3	0	1	2	0	0	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
a0001c0001t0001g0017	0/0	3	3	0	0	0	0	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
a0001c0001t0001g0018	0/0	3	3	0	0	0	0	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
a0001c0001t0001g0020	0/0	2	0	0	2	0	0	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
a0001c0001t0001g0021	0/0	2	1	1	0	0	0	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
a0001c0001t0001g0022	0/0	2	2	0	0	0	0	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
a0001c0001t0001g0025	0/0	2	0	0	2	0	0	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
a0001c0001t0001g0026	0/0	2	0	1	0	1	0	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
a0001c0001t0001g0027	0/0	2	0	0	2	0	0	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
a0001c0001t0001g0028	0/0	2	0	2	0	0	0	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
a0001c0001t0001g0029	0/0	1	0	1	0	0	0	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
a0001c0001t0001g0030	0/0	1	0	0	0	0	1	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
a0001c0001t0001g0033	0/0	1	1	0	0	0	0	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
a0001c0001t0001g0034	0/0	1	0	0	1	0	0	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
a0001c0001t0001g0035	0/0	1	1	0	0	0	0	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
a0001c0001t0001g0036	0/0	1	1	0	0	0	0	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
a0001c0001t0001g0040	0/0	1	0	0	0	0	1	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
a0001c0001t0001g0041	0/0	1	0	1	0	0	0	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
a0001c0001t0001g0042	0/0	1	0	0	0	0	1	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
a0001c0001t0001g0043	0/0	1	0	0	0	0	1	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
a0001c0001t0001g0044	0/0	1	1	0	0	0	0	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
a0001c0001t0001g0045	0/0	1	0	1	0	0	0	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
a0001c0001t0001g0046	0/0	1	0	0	1	0	0	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
a0001c0001t0001g0047	0/0	1	1	0	0	0	0	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
a0001c0001t0001g0048	0/0	1	1	0	0	0	0	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
a0001c0001t0001g0049	0/0	1	0	1	0	0	0	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
a0001c0001t0001g0050	0/0	1	0	0	0	1	0	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
a0001c0001t0001g0051	0/0	1	1	0	0	0	0	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
a0001c0001t0001g0052	0/0	1	0	0	1	0	0	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
a0001c0001t0001g0053	0/0	1	0	0	1	0	0	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
a0001c0001t0001g0055	0/0	1	0	0	0	0	1	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
a0001c0001t0001g0056	0/0	1	0	0	0	0	1	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
a0001c0001t0001g0057	0/0	1	0	0	1	0	0	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
a0001c0001t0001g0058	0/0	1	1	0	0	0	0	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
a0001c0001t0001g0059	0/0	1	0	1	0	0	0	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
a0001c0001t0001g0060	0/0	1	0	0	1	0	0	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
a0001c0001t0001g0061	0/0	1	0	0	1	0	0	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
a0001c0001t0001g0062	0/0	1	1	0	0	0	0	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
a0001c0001t0001g0063	0/0	1	1	0	0	0	0	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
a0001c0001t0001g0064	0/0	1	0	0	1	0	0	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
a0001c0001t0001g0065	0/0	1	1	0	0	0	0	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
a0001c0001t0001g0066	0/0	1	0	1	0	0	0	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
a0001c0001t0001g0067	0/0	1	0	0	1	0	0	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
a0001c0001t0001g0068	0/0	1	0	0	0	0	1	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
a0001c0001t0001g0069	0/0	1	1	0	0	0	0	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
a0001c0001t0001g0070	0/0	1	1	0	0	0	0	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
a0001c0001t0001g0071	0/0	1	0	0	1	0	0	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
a0001c0001t0001g0072	0/0	1	1	0	0	0	0	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
a0001c0001t0001g0073	0/0	1	1	0	0	0	0	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
a0001c0001t0001g0074	0/0	1	1	0	0	0	0	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
a0001c0001t0001g0075	0/0	1	0	0	1	0	0	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
a0001c0001t0001g0076	0/0	1	0	0	1	0	0	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
a0001c0001t0001g0077	0/0	1	0	0	1	0	0	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
a0001c0001t0001g0078	0/0	1	1	0	0	0	0	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
a0001c0001t0001g0079	0/0	1	1	0	0	0	0	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
a0001c0001t0001g0080	0/0	1	1	0	0	0	0	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
a0001c0001t0001g0084	0/0	1	0	0	0	0	1	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
a0001c0001t0001g0085	0/0	1	1	0	0	0	0	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
a0001c0001t0003g0001	0/0	1	0	0	1	0	0	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
a0001c0001t0003g0014	0/0	2	0	0	2	0	0	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
a0001c0001t0004g0024	0/0	2	2	0	0	0	0	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
a0001c0001t0004g0083	0/0	1	1	0	0	0	0	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
a0001c0001t0005g0031	0/0	1	1	0	0	0	0	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
a0001c0001t0005g0032	0/0	1	0	0	0	0	1	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
a0001c0001t0006g0054	0/0	1	0	1	0	0	0	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
a0001c0001t0007g0001	0/0	1	0	0	1	0	0	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
a0001c0014t0001g0001	0/0	1	0	0	0	0	1	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
a0002c0002t0001g0004	0/0	10	1	4	0	3	2	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
a0002c0002t0001g0011	0/0	3	1	2	0	0	0	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
a0002c0002t0001g0012	0/0	3	2	1	0	0	0	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
a0002c0002t0001g0037	0/0	1	0	1	0	0	0	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
a0002c0002t0001g0038	0/0	1	0	1	0	0	0	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
a0003c0003t0002g0006	0/0	6	0	1	3	1	1	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
a0003c0003t0002g0081	0/0	1	0	0	0	0	1	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
a0004c0004t0001g0013	0/0	2	2	0	0	0	0	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
a0004c0004t0001g0019	0/0	2	2	0	0	0	0	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
a0004c0004t0001g0023	0/0	2	2	0	0	0	0	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
a0005c0005t0001g0001	0/0	3	0	1	0	0	2	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
a0006c0006t0001g0001	0/0	1	0	0	1	0	0	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
a0006c0006t0001g0039	0/0	1	0	1	0	0	0	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
a0007c0008t0001g0004	0/0	1	0	1	0	0	0	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
a0008c0012t0001g0013	0/0	1	1	0	0	0	0	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
a0009c0011t0002g0006	0/0	1	0	0	0	0	1	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
a0010c0009t0001g0002	0/0	1	0	0	0	0	1	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
a0011c0010t0001g0010	0/0	1	0	1	0	0	0	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
a0012c0007t0008g0003	0/0	1	0	0	0	0	1	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
a0013c0013t0001g0082	0/0	1	1	0	0	0	0	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690

sampleid	ID haplotypeid	ahapid	chapid	thapid	ghapid	gpopname	popname	regionname	genename	chr	start	end
HG00099	hp1	a0001	c0001	t0001	g0003	EUR	GBR	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
HG00099	hp2	a0001	c0001	t0001	g0001	EUR	GBR	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
HG00140	hp1	a0001	c0001	t0001	g0001	EUR	GBR	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
HG00140	hp2	a0002	c0002	t0001	g0004	EUR	GBR	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
HG00280	hp1	a0001	c0001	t0001	g0001	EUR	FIN	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
HG00280	hp2	a0001	c0001	t0001	g0026	EUR	FIN	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
HG00323	hp1	a0001	c0001	t0001	g0001	EUR	FIN	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
HG00323	hp2	a0001	c0001	t0001	g0003	EUR	FIN	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
HG00423	hp1	a0001	c0001	t0001	g0003	EAS	CHS	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
HG00423	hp2	a0001	c0001	t0001	g0001	EAS	CHS	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
HG00438	hp1	a0001	c0001	t0001	g0060	EAS	CHS	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
HG00438	hp2	a0001	c0001	t0001	g0001	EAS	CHS	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
HG00544	hp1	a0001	c0001	t0001	g0002	EAS	CHS	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
HG00544	hp2	a0006	c0006	t0001	g0001	EAS	CHS	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
HG00558	hp1	a0001	c0001	t0001	g0002	EAS	CHS	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
HG00558	hp2	a0001	c0001	t0001	g0001	EAS	CHS	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
HG00597	hp1	a0001	c0001	t0001	g0034	EAS	CHS	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
HG00597	hp2	a0001	c0001	t0001	g0001	EAS	CHS	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
HG00639	hp1	a0001	c0001	t0001	g0002	AMR	PUR	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
HG00639	hp2	a0006	c0006	t0001	g0039	AMR	PUR	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
HG00733	hp1	a0001	c0001	t0001	g0059	AMR	PUR	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
HG00733	hp2	a0001	c0001	t0001	g0041	AMR	PUR	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
HG00735	hp1	a0002	c0002	t0001	g0011	AMR	PUR	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
HG00735	hp2	a0001	c0001	t0001	g0001	AMR	PUR	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
HG00738	hp1	a0002	c0002	t0001	g0038	AMR	PUR	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
HG00738	hp2	a0001	c0001	t0001	g0003	AMR	PUR	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
HG00741	hp1	a0001	c0001	t0001	g0002	AMR	PUR	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
HG00741	hp2	a0002	c0002	t0001	g0004	AMR	PUR	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
HG01070	hp1	a0001	c0001	t0001	g0001	AMR	PUR	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
HG01070	hp2	a0001	c0001	t0001	g0003	AMR	PUR	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
HG01081	hp1	a0001	c0001	t0001	g0029	AMR	PUR	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
HG01081	hp2	a0001	c0001	t0001	g0002	AMR	PUR	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
HG01099	hp1	a0007	c0008	t0001	g0004	AMR	PUR	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
HG01099	hp2	a0001	c0001	t0001	g0008	AMR	PUR	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
HG01106	hp1	a0002	c0002	t0001	g0004	AMR	PUR	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
HG01106	hp2	a0001	c0001	t0001	g0001	AMR	PUR	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
HG01109	hp1	a0001	c0001	t0001	g0002	AMR	PUR	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
HG01109	hp2	a0001	c0001	t0001	g0001	AMR	PUR	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
HG01167	hp1	a0001	c0001	t0001	g0001	AMR	PUR	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
HG01167	hp2	a0002	c0002	t0001	g0004	AMR	PUR	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
HG01168	hp1	a0002	c0002	t0001	g0004	AMR	PUR	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
HG01168	hp2	a0001	c0001	t0001	g0003	AMR	PUR	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
HG01169	hp1	a0001	c0001	t0001	g0001	AMR	PUR	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
HG01169	hp2	a0001	c0001	t0001	g0016	AMR	PUR	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
HG01175	hp1	a0001	c0001	t0001	g0002	AMR	PUR	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
HG01175	hp2	a0001	c0001	t0001	g0001	AMR	PUR	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
HG01192	hp1	a0002	c0002	t0001	g0011	AMR	PUR	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
HG01192	hp2	a0001	c0001	t0001	g0001	AMR	PUR	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
HG01243	hp1	a0011	c0010	t0001	g0010	AMR	PUR	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
HG01243	hp2	a0001	c0001	t0001	g0001	AMR	PUR	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
HG01256	hp1	a0001	c0001	t0001	g0066	AMR	CLM	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
HG01256	hp2	a0001	c0001	t0001	g0008	AMR	CLM	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
HG01258	hp1	a0001	c0001	t0001	g0026	AMR	CLM	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
HG01258	hp2	a0001	c0001	t0001	g0008	AMR	CLM	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
HG01261	hp1	a0002	c0002	t0001	g0037	AMR	CLM	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
HG01261	hp2	a0002	c0002	t0001	g0012	AMR	CLM	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
HG01358	hp1	a0001	c0001	t0001	g0049	AMR	CLM	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
HG01358	hp2	a0001	c0001	t0001	g0001	AMR	CLM	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
HG01433	hp1	a0001	c0001	t0001	g0028	AMR	CLM	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
HG01433	hp2	a0001	c0001	t0001	g0045	AMR	CLM	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
HG01496	hp1	a0005	c0005	t0001	g0001	AMR	CLM	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
HG01496	hp2	a0001	c0001	t0001	g0001	AMR	CLM	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
HG01515	hp1	a0001	c0001	t0001	g0001	EUR	IBS	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
HG01515	hp2	a0001	c0001	t0001	g0003	EUR	IBS	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
HG01516	hp1	a0002	c0002	t0001	g0004	EUR	IBS	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
HG01516	hp2	a0001	c0001	t0001	g0002	EUR	IBS	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
HG01517	hp1	a0002	c0002	t0001	g0004	EUR	IBS	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
HG01517	hp2	a0001	c0001	t0001	g0003	EUR	IBS	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
HG01884	hp1	a0001	c0001	t0001	g0001	AFR	ACB	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
HG01884	hp2	a0002	c0002	t0001	g0012	AFR	ACB	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
HG01891	hp1	a0001	c0001	t0001	g0001	AFR	ACB	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
HG01891	hp2	a0001	c0001	t0001	g0015	AFR	ACB	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
HG01934	hp1	a0001	c0001	t0001	g0001	AMR	PEL	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
HG01934	hp2	a0001	c0001	t0001	g0002	AMR	PEL	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
HG01952	hp1	a0001	c0001	t0001	g0001	AMR	PEL	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
HG01952	hp2	a0001	c0001	t0001	g0001	AMR	PEL	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
HG01978	hp1	a0001	c0001	t0001	g0001	AMR	PEL	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
HG01978	hp2	a0001	c0001	t0001	g0021	AMR	PEL	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
HG01993	hp1	a0001	c0001	t0001	g0001	AMR	PEL	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
HG01993	hp2	a0001	c0001	t0001	g0008	AMR	PEL	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
HG02015	hp1	a0001	c0001	t0001	g0001	EAS	KHV	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
HG02015	hp2	a0001	c0001	t0001	g0061	EAS	KHV	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
HG02027	hp1	a0001	c0001	t0001	g0025	EAS	KHV	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
HG02027	hp2	a0001	c0001	t0007	g0001	EAS	KHV	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
HG02040	hp1	a0001	c0001	t0001	g0003	EAS	KHV	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
HG02040	hp2	a0001	c0001	t0001	g0001	EAS	KHV	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
HG02055	hp1	a0001	c0001	t0005	g0031	AFR	ACB	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
HG02055	hp2	a0001	c0001	t0001	g0009	AFR	ACB	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
HG02056	hp1	a0001	c0001	t0001	g0003	EAS	KHV	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
HG02056	hp2	a0001	c0001	t0001	g0001	EAS	KHV	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
HG02074	hp1	a0001	c0001	t0001	g0001	EAS	KHV	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
HG02074	hp2	a0001	c0001	t0001	g0003	EAS	KHV	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
HG02132	hp1	a0003	c0003	t0002	g0006	EAS	KHV	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
HG02132	hp2	a0001	c0001	t0001	g0002	EAS	KHV	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
HG02135	hp1	a0001	c0001	t0001	g0001	EAS	KHV	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
HG02135	hp2	a0001	c0001	t0001	g0001	EAS	KHV	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
HG02145	hp1	a0002	c0002	t0001	g0012	AFR	ACB	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
HG02145	hp2	a0001	c0001	t0001	g0073	AFR	ACB	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
HG02148	hp1	a0001	c0001	t0006	g0054	AMR	PEL	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
HG02148	hp2	a0003	c0003	t0002	g0006	AMR	PEL	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
HG02257	hp1	a0001	c0001	t0001	g0001	AFR	ACB	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
HG02257	hp2	a0001	c0001	t0001	g0069	AFR	ACB	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
HG02273	hp1	a0001	c0001	t0001	g0001	AMR	PEL	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
HG02273	hp2	a0001	c0001	t0001	g0028	AMR	PEL	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
HG02280	hp1	a0001	c0001	t0001	g0001	AFR	ACB	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
HG02280	hp2	a0004	c0004	t0001	g0019	AFR	ACB	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
HG02300	hp1	a0001	c0001	t0001	g0002	AMR	PEL	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
HG02300	hp2	a0001	c0001	t0001	g0001	AMR	PEL	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
HG02451	hp1	a0001	c0001	t0001	g0072	AFR	ACB	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
HG02451	hp2	a0001	c0001	t0001	g0001	AFR	ACB	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
HG02572	hp1	a0001	c0001	t0001	g0010	AFR	GWD	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
HG02572	hp2	a0001	c0001	t0001	g0079	AFR	GWD	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
HG02615	hp1	a0001	c0001	t0001	g0044	AFR	GWD	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
HG02615	hp2	a0001	c0001	t0004	g0024	AFR	GWD	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
HG02622	hp1	a0001	c0001	t0001	g0015	AFR	GWD	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
HG02622	hp2	a0001	c0001	t0001	g0002	AFR	GWD	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
HG02698	hp1	a0001	c0001	t0005	g0032	SAS	PJL	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
HG02698	hp2	a0001	c0001	t0001	g0001	SAS	PJL	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
HG02717	hp1	a0001	c0001	t0001	g0033	AFR	GWD	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
HG02717	hp2	a0001	c0001	t0001	g0001	AFR	GWD	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
HG02723	hp1	a0001	c0001	t0001	g0002	AFR	GWD	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
HG02723	hp2	a0001	c0001	t0001	g0017	AFR	GWD	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
HG02735	hp1	a0001	c0001	t0001	g0001	SAS	PJL	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
HG02735	hp2	a0001	c0001	t0001	g0042	SAS	PJL	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
HG02738	hp1	a0001	c0001	t0001	g0001	SAS	PJL	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
HG02738	hp2	a0001	c0001	t0001	g0001	SAS	PJL	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
HG02809	hp1	a0001	c0001	t0001	g0074	AFR	GWD	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
HG02809	hp2	a0001	c0001	t0001	g0002	AFR	GWD	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
HG02818	hp1	a0001	c0001	t0001	g0078	AFR	GWD	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
HG02818	hp2	a0008	c0012	t0001	g0013	AFR	GWD	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
HG02886	hp1	a0001	c0001	t0001	g0009	AFR	GWD	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
HG02886	hp2	a0001	c0001	t0001	g0007	AFR	GWD	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
HG02895	hp1	a0001	c0001	t0001	g0022	AFR	GWD	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
HG02895	hp2	a0002	c0002	t0001	g0011	AFR	GWD	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
HG02896	hp1	a0002	c0002	t0001	g0004	AFR	GWD	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
HG02896	hp2	a0001	c0001	t0001	g0007	AFR	GWD	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
HG02897	hp1	a0001	c0001	t0001	g0022	AFR	GWD	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
HG02897	hp2	a0001	c0001	t0001	g0007	AFR	GWD	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
HG02922	hp1	a0001	c0001	t0001	g0001	AFR	ESN	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
HG02922	hp2	a0001	c0001	t0001	g0080	AFR	ESN	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
HG02965	hp1	a0001	c0001	t0001	g0001	AFR	ESN	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
HG02965	hp2	a0001	c0001	t0001	g0051	AFR	ESN	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
HG02970	hp1	a0001	c0001	t0004	g0083	AFR	ESN	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
HG02970	hp2	a0004	c0004	t0001	g0013	AFR	ESN	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
HG02976	hp1	a0001	c0001	t0001	g0001	AFR	ESN	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
HG02976	hp2	a0001	c0001	t0001	g0007	AFR	ESN	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
HG03017	hp1	a0002	c0002	t0001	g0004	SAS	PJL	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
HG03017	hp2	a0001	c0001	t0001	g0001	SAS	PJL	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
HG03041	hp1	a0001	c0001	t0001	g0035	AFR	GWD	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
HG03041	hp2	a0004	c0004	t0001	g0013	AFR	GWD	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
HG03098	hp1	a0004	c0004	t0001	g0023	AFR	MSL	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
HG03098	hp2	a0001	c0001	t0001	g0009	AFR	MSL	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
HG03130	hp1	a0001	c0001	t0001	g0036	AFR	ESN	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
HG03130	hp2	a0001	c0001	t0001	g0001	AFR	ESN	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
HG03139	hp1	a0001	c0001	t0001	g0047	AFR	ESN	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
HG03139	hp2	a0004	c0004	t0001	g0019	AFR	ESN	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
HG03195	hp1	a0001	c0001	t0001	g0002	AFR	ESN	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
HG03195	hp2	a0001	c0001	t0001	g0070	AFR	ESN	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
HG03209	hp1	a0001	c0001	t0001	g0063	AFR	MSL	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
HG03209	hp2	a0001	c0001	t0001	g0001	AFR	MSL	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
HG03225	hp1	a0001	c0001	t0001	g0001	AFR	MSL	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
HG03225	hp2	a0001	c0001	t0001	g0017	AFR	MSL	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
HG03239	hp1	a0001	c0001	t0001	g0002	SAS	PJL	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
HG03239	hp2	a0001	c0001	t0001	g0001	SAS	PJL	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
HG03453	hp1	a0001	c0001	t0001	g0002	AFR	MSL	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
HG03453	hp2	a0001	c0001	t0001	g0001	AFR	MSL	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
HG03486	hp1	a0001	c0001	t0001	g0002	AFR	MSL	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
HG03486	hp2	a0001	c0001	t0001	g0001	AFR	MSL	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
HG03490	hp1	a0005	c0005	t0001	g0001	SAS	PJL	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
HG03490	hp2	a0009	c0011	t0002	g0006	SAS	PJL	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
HG03492	hp1	a0001	c0001	t0001	g0056	SAS	PJL	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
HG03492	hp2	a0005	c0005	t0001	g0001	SAS	PJL	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
HG03516	hp1	a0001	c0001	t0001	g0001	AFR	ESN	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
HG03516	hp2	a0001	c0001	t0001	g0010	AFR	ESN	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
HG03540	hp1	a0001	c0001	t0001	g0021	AFR	GWD	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
HG03540	hp2	a0001	c0001	t0004	g0024	AFR	GWD	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
HG03579	hp1	a0001	c0001	t0001	g0058	AFR	MSL	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
HG03579	hp2	a0001	c0001	t0001	g0048	AFR	MSL	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
HG03654	hp1	a0001	c0001	t0001	g0068	SAS	PJL	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
HG03654	hp2	a0001	c0001	t0001	g0001	SAS	PJL	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
HG03669	hp1	a0001	c0001	t0001	g0040	SAS	PJL	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
HG03669	hp2	a0001	c0001	t0001	g0001	SAS	PJL	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
HG03688	hp1	a0003	c0003	t0002	g0081	SAS	STU	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
HG03688	hp2	a0003	c0003	t0002	g0006	SAS	STU	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
HG03831	hp1	a0001	c0001	t0001	g0003	SAS	BEB	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
HG03831	hp2	a0001	c0001	t0001	g0002	SAS	BEB	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
HG03834	hp1	a0001	c0001	t0001	g0002	SAS	BEB	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
HG03834	hp2	a0001	c0001	t0001	g0084	SAS	BEB	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
HG03942	hp1	a0001	c0001	t0001	g0043	SAS	BEB	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
HG03942	hp2	a0001	c0001	t0001	g0003	SAS	BEB	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
HG04115	hp1	a0001	c0001	t0001	g0001	SAS	STU	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
HG04115	hp2	a0001	c0001	t0001	g0055	SAS	STU	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
HG04199	hp1	a0010	c0009	t0001	g0002	SAS	STU	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
HG04199	hp2	a0012	c0007	t0008	g0003	SAS	STU	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
HG04204	hp1	a0001	c0014	t0001	g0001	SAS	STU	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
HG04204	hp2	a0001	c0001	t0001	g0002	SAS	STU	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
HG04228	hp1	a0002	c0002	t0001	g0004	SAS	STU	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
HG04228	hp2	a0001	c0001	t0001	g0001	SAS	STU	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
NA18522	hp1	a0004	c0004	t0001	g0023	AFR	YRI	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
NA18522	hp2	a0001	c0001	t0001	g0001	AFR	YRI	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
NA18612	hp1	a0001	c0001	t0001	g0014	EAS	CHB	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
NA18612	hp2	a0001	c0001	t0001	g0001	EAS	CHB	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
NA18747	hp1	a0001	c0001	t0001	g0003	EAS	CHB	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
NA18747	hp2	a0001	c0001	t0001	g0001	EAS	CHB	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
NA18906	hp1	a0001	c0001	t0001	g0002	AFR	YRI	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
NA18906	hp2	a0001	c0001	t0001	g0018	AFR	YRI	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
NA18941	hp1	a0001	c0001	t0001	g0002	EAS	JPT	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
NA18941	hp2	a0001	c0001	t0001	g0001	EAS	JPT	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
NA18946	hp1	a0001	c0001	t0001	g0001	EAS	JPT	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
NA18946	hp2	a0001	c0001	t0001	g0005	EAS	JPT	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
NA18949	hp1	a0001	c0001	t0001	g0020	EAS	JPT	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
NA18949	hp2	a0001	c0001	t0001	g0001	EAS	JPT	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
NA18951	hp1	a0001	c0001	t0001	g0001	EAS	JPT	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
NA18951	hp2	a0001	c0001	t0001	g0002	EAS	JPT	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
NA18954	hp1	a0001	c0001	t0001	g0001	EAS	JPT	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
NA18954	hp2	a0001	c0001	t0001	g0016	EAS	JPT	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
NA18962	hp1	a0001	c0001	t0001	g0053	EAS	JPT	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
NA18962	hp2	a0001	c0001	t0001	g0001	EAS	JPT	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
NA18965	hp1	a0001	c0001	t0001	g0005	EAS	JPT	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
NA18965	hp2	a0001	c0001	t0001	g0001	EAS	JPT	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
NA18966	hp1	a0001	c0001	t0001	g0001	EAS	JPT	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
NA18966	hp2	a0001	c0001	t0001	g0076	EAS	JPT	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
NA18971	hp1	a0001	c0001	t0001	g0052	EAS	JPT	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
NA18971	hp2	a0001	c0001	t0001	g0001	EAS	JPT	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
NA18974	hp1	a0001	c0001	t0001	g0025	EAS	JPT	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
NA18974	hp2	a0001	c0001	t0001	g0001	EAS	JPT	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
NA18975	hp1	a0001	c0001	t0001	g0002	EAS	JPT	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
NA18975	hp2	a0001	c0001	t0001	g0001	EAS	JPT	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
NA18979	hp1	a0001	c0001	t0001	g0071	EAS	JPT	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
NA18979	hp2	a0001	c0001	t0001	g0001	EAS	JPT	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
NA18980	hp1	a0001	c0001	t0001	g0005	EAS	JPT	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
NA18980	hp2	a0001	c0001	t0001	g0002	EAS	JPT	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
NA18982	hp1	a0001	c0001	t0003	g0001	EAS	JPT	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
NA18982	hp2	a0001	c0001	t0003	g0014	EAS	JPT	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
NA18983	hp1	a0003	c0003	t0002	g0006	EAS	JPT	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
NA18983	hp2	a0001	c0001	t0001	g0027	EAS	JPT	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
NA18984	hp1	a0001	c0001	t0001	g0002	EAS	JPT	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
NA18984	hp2	a0001	c0001	t0001	g0005	EAS	JPT	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
NA18985	hp1	a0001	c0001	t0001	g0001	EAS	JPT	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
NA18985	hp2	a0001	c0001	t0001	g0002	EAS	JPT	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
NA18987	hp1	a0001	c0001	t0001	g0002	EAS	JPT	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
NA18987	hp2	a0001	c0001	t0001	g0001	EAS	JPT	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
NA18994	hp1	a0001	c0001	t0001	g0001	EAS	JPT	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
NA18994	hp2	a0001	c0001	t0001	g0002	EAS	JPT	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
NA18995	hp1	a0001	c0001	t0001	g0001	EAS	JPT	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
NA18995	hp2	a0001	c0001	t0001	g0057	EAS	JPT	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
NA18998	hp1	a0001	c0001	t0001	g0001	EAS	JPT	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
NA18998	hp2	a0001	c0001	t0001	g0005	EAS	JPT	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
NA19004	hp1	a0001	c0001	t0001	g0003	EAS	JPT	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
NA19004	hp2	a0001	c0001	t0001	g0075	EAS	JPT	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
NA19006	hp1	a0001	c0001	t0001	g0077	EAS	JPT	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
NA19006	hp2	a0001	c0001	t0001	g0002	EAS	JPT	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
NA19007	hp1	a0001	c0001	t0001	g0001	EAS	JPT	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
NA19007	hp2	a0001	c0001	t0001	g0002	EAS	JPT	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
NA19010	hp1	a0001	c0001	t0001	g0046	EAS	JPT	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
NA19010	hp2	a0001	c0001	t0001	g0001	EAS	JPT	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
NA19011	hp1	a0001	c0001	t0001	g0067	EAS	JPT	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
NA19011	hp2	a0001	c0001	t0001	g0001	EAS	JPT	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
NA19012	hp1	a0001	c0001	t0001	g0001	EAS	JPT	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
NA19012	hp2	a0001	c0001	t0001	g0005	EAS	JPT	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
NA19030	hp1	a0001	c0001	t0001	g0065	AFR	LWK	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
NA19030	hp2	a0013	c0013	t0001	g0082	AFR	LWK	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
NA19058	hp1	a0001	c0001	t0001	g0016	EAS	JPT	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
NA19058	hp2	a0001	c0001	t0001	g0001	EAS	JPT	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
NA19062	hp1	a0001	c0001	t0001	g0003	EAS	JPT	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
NA19062	hp2	a0001	c0001	t0001	g0001	EAS	JPT	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
NA19064	hp1	a0001	c0001	t0001	g0005	EAS	JPT	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
NA19064	hp2	a0001	c0001	t0001	g0001	EAS	JPT	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
NA19066	hp1	a0001	c0001	t0001	g0001	EAS	JPT	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
NA19066	hp2	a0001	c0001	t0001	g0002	EAS	JPT	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
NA19067	hp1	a0001	c0001	t0001	g0002	EAS	JPT	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
NA19067	hp2	a0001	c0001	t0001	g0001	EAS	JPT	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
NA19072	hp1	a0001	c0001	t0001	g0002	EAS	JPT	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
NA19072	hp2	a0001	c0001	t0001	g0001	EAS	JPT	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
NA19074	hp1	a0001	c0001	t0001	g0001	EAS	JPT	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
NA19074	hp2	a0001	c0001	t0001	g0002	EAS	JPT	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
NA19081	hp1	a0001	c0001	t0001	g0027	EAS	JPT	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
NA19081	hp2	a0001	c0001	t0003	g0014	EAS	JPT	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
NA19085	hp1	a0001	c0001	t0001	g0064	EAS	JPT	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
NA19085	hp2	a0001	c0001	t0001	g0001	EAS	JPT	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
NA19088	hp1	a0001	c0001	t0001	g0001	EAS	JPT	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
NA19088	hp2	a0001	c0001	t0001	g0002	EAS	JPT	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
NA19091	hp1	a0001	c0001	t0001	g0020	EAS	JPT	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
NA19091	hp2	a0001	c0001	t0001	g0005	EAS	JPT	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
NA19240	hp1	a0001	c0001	t0001	g0001	AFR	YRI	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
NA19240	hp2	a0001	c0001	t0001	g0002	AFR	YRI	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
NA20129	hp1	a0001	c0001	t0001	g0085	AFR	ASW	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
NA20129	hp2	a0001	c0001	t0001	g0018	AFR	ASW	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
NA20805	hp1	a0001	c0001	t0001	g0050	EUR	TSI	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
NA20805	hp2	a0003	c0003	t0002	g0006	EUR	TSI	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
NA20905	hp1	a0001	c0001	t0001	g0030	SAS	GIH	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
NA20905	hp2	a0001	c0001	t0001	g0002	SAS	GIH	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
HG01123	hp1	a0001	c0001	t0001	g0002	AMR	CLM	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
HG01123	hp2	a0001	c0001	t0001	g0001	AMR	CLM	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
HG02109	hp1	a0001	c0001	t0001	g0017	AFR	ACB	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
HG02109	hp2	a0001	c0001	t0001	g0001	AFR	ACB	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
HG02486	hp1	a0001	c0001	t0001	g0002	AFR	ACB	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
HG02486	hp2	a0001	c0001	t0001	g0001	AFR	ACB	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
HG02559	hp1	a0001	c0001	t0001	g0002	AFR	ACB	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
HG02559	hp2	a0001	c0001	t0001	g0062	AFR	ACB	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
HG03471	hp1	a0001	c0001	t0001	g0001	AFR	MSL	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
HG03471	hp2	a0001	c0001	t0001	g0015	AFR	MSL	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
HG06807	hp1	a0001	c0001	t0001	g0002	AFR	USA	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
HG06807	hp2	a0001	c0001	t0001	g0018	AFR	USA	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
NA18955	hp1	a0003	c0003	t0002	g0006	EAS	JPT	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
NA18955	hp2	a0001	c0001	t0001	g0001	EAS	JPT	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
NA20300	hp1	a0001	c0001	t0001	g0001	AFR	USA	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
NA20300	hp2	a0001	c0001	t0001	g0007	AFR	USA	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
homoSapiens_chm13v2	hp1	a0001	c0001	t0001	g0003	REF	REF	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690
homoSapiens_grch38	hp1	a0001	c0001	t0001	g0001	REF	REF	C9orf43_chr9_113405747_113434690	C9orf43	chr9	113405747	113434690

chr:pos	ref	alt	# # of ahapid:amino-acid(protein) level	ahapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	hgvs_p	genename	geneid	featuretype	featureid	transcript_biotype	rank	cdna cdna pos length	cds cds pos length	aa aa pos length	status	chr	pos
chr9:113419139	A A	G G	1	a0005 a0005	3	HG01496.hp1 HG03490.hp1 HG03492.hp2 HG01496.hp1 HG03490.hp1 HG03492.hp2	missense_variant	MODERATE	c.319A>G c.319A>G	p.Ile107Val p.Ile107Val	C9orf43	ENSG00000157653.12	transcript	ENST00000374165.6	protein_coding	4/14	623/1994	319/1386	107/461		chr9	113419139
chr9:113419143	A A	G G	1	a0013 a0013	1	NA19030.hp2 NA19030.hp2	missense_variant	MODERATE	c.323A>G c.323A>G	p.Asn108Ser p.Asn108Ser	C9orf43	ENSG00000157653.12	transcript	ENST00000374165.6	protein_coding	4/14	627/1994	323/1386	108/461		chr9	113419143
chr9:113422580	G G	A A	1	a0012 a0012	1	HG04199.hp2 HG04199.hp2	missense_variant	MODERATE	c.478G>A c.478G>A	p.Ala160Thr p.Ala160Thr	C9orf43	ENSG00000157653.12	transcript	ENST00000374165.6	protein_coding	6/14	782/1994	478/1386	160/461		chr9	113422580
chr9:113423375	G G	A A	1	a0007 a0007	1	HG01099.hp1 HG01099.hp1	missense_variant	MODERATE	c.533G>A c.533G>A	p.Arg178Gln p.Arg178Gln	C9orf43	ENSG00000157653.12	transcript	ENST00000374165.6	protein_coding	7/14	837/1994	533/1386	178/461		chr9	113423375
chr9:113424264	A A	G G	2	a0002 a0007 a0002 a0007	19	HG00140.hp2 HG00735.hp1 HG00738.hp1 others(16): Show HG00140.hp2 HG00735.hp1 HG00738.hp1 HG00741.hp2 HG01099.hp1 HG01106.hp1 HG01167.hp2 HG01168.hp1 HG01192.hp1 HG01261.hp1 HG01261.hp2 HG01516.hp1 HG01517.hp1 HG01884.hp2 HG02145.hp1 HG02895.hp2 HG02896.hp1 HG03017.hp1 HG04228.hp1	missense_variant	MODERATE	c.755A>G c.755A>G	p.Asp252Gly p.Asp252Gly	C9orf43	ENSG00000157653.12	transcript	ENST00000374165.6	protein_coding	8/14	1059/1994	755/1386	252/461		chr9	113424264
chr9:113424302	C C	T T	1	a0008 a0008	1	HG02818.hp2 HG02818.hp2	missense_variant	MODERATE	c.793C>T c.793C>T	p.Arg265Cys p.Arg265Cys	C9orf43	ENSG00000157653.12	transcript	ENST00000374165.6	protein_coding	8/14	1097/1994	793/1386	265/461		chr9	113424302
chr9:113425022	C C	G G	2	a0003 a0009 a0003 a0009	8	HG02132.hp1 HG02148.hp2 HG03490.hp2 others(5): Show HG02132.hp1 HG02148.hp2 HG03490.hp2 HG03688.hp1 HG03688.hp2 NA18955.hp1 NA18983.hp1 NA20805.hp2	missense_variant	MODERATE	c.811C>G c.811C>G	p.Pro271Ala p.Pro271Ala	C9orf43	ENSG00000157653.12	transcript	ENST00000374165.6	protein_coding	9/14	1115/1994	811/1386	271/461		chr9	113425022
chr9:113425365	G G	GGCA GGCA	2	a0003 a0009 a0003 a0009	8	HG02132.hp1 HG02148.hp2 HG03490.hp2 others(5): Show HG02132.hp1 HG02148.hp2 HG03490.hp2 HG03688.hp1 HG03688.hp2 NA18955.hp1 NA18983.hp1 NA20805.hp2	disruptive_inframe_insertion	MODERATE	c.906_908dupGCA c.906_908dupGCA	p.Gln303dup p.Gln303dup	C9orf43	ENSG00000157653.12	transcript	ENST00000374165.6	protein_coding	10/14	1213/1994	909/1386	303/461	INFO_REALIGN_3_PRIME	chr9	113425365
chr9:113425662	A A	G G	1	a0011 a0011	1	HG01243.hp1 HG01243.hp1	missense_variant	MODERATE	c.962A>G c.962A>G	p.Lys321Arg p.Lys321Arg	C9orf43	ENSG00000157653.12	transcript	ENST00000374165.6	protein_coding	11/14	1266/1994	962/1386	321/461		chr9	113425662
chr9:113428907	C C	T T	1	a0006 a0006	2	HG00544.hp2 HG00639.hp2 HG00544.hp2 HG00639.hp2	missense_variant	MODERATE	c.1115C>T c.1115C>T	p.Thr372Met p.Thr372Met	C9orf43	ENSG00000157653.12	transcript	ENST00000374165.6	protein_coding	13/14	1419/1994	1115/1386	372/461		chr9	113428907
chr9:113428925	A A	C C	2	a0003 a0009 a0003 a0009	8	HG02132.hp1 HG02148.hp2 HG03490.hp2 others(5): Show HG02132.hp1 HG02148.hp2 HG03490.hp2 HG03688.hp1 HG03688.hp2 NA18955.hp1 NA18983.hp1 NA20805.hp2	missense_variant	MODERATE	c.1133A>C c.1133A>C	p.Asn378Thr p.Asn378Thr	C9orf43	ENSG00000157653.12	transcript	ENST00000374165.6	protein_coding	13/14	1437/1994	1133/1386	378/461		chr9	113428925
chr9:113428933	G G	A A	1	a0010 a0010	1	HG04199.hp1 HG04199.hp1	missense_variant	MODERATE	c.1141G>A c.1141G>A	p.Asp381Asn p.Asp381Asn	C9orf43	ENSG00000157653.12	transcript	ENST00000374165.6	protein_coding	13/14	1445/1994	1141/1386	381/461		chr9	113428933
chr9:113429228	G G	A A	2	a0004 a0008 a0004 a0008	7	HG02280.hp2 HG02818.hp2 HG02970.hp2 others(4): Show HG02280.hp2 HG02818.hp2 HG02970.hp2 HG03041.hp2 HG03098.hp1 HG03139.hp2 NA18522.hp1	missense_variant	MODERATE	c.1228G>A c.1228G>A	p.Ala410Thr p.Ala410Thr	C9orf43	ENSG00000157653.12	transcript	ENST00000374165.6	protein_coding	14/14	1532/1994	1228/1386	410/461		chr9	113429228
chr9:113429349	A A	T T	1	a0009 a0009	1	HG03490.hp2 HG03490.hp2	missense_variant	MODERATE	c.1349A>T c.1349A>T	p.Asp450Val p.Asp450Val	C9orf43	ENSG00000157653.12	transcript	ENST00000374165.6	protein_coding	14/14	1653/1994	1349/1386	450/461		chr9	113429349

chr:pos	ref	alt	# # of chapid	chapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	hgvs_p	genename	geneid	featuretype	featureid	transcript_biotype	rank	cdna cdna pos length	cds cds pos length	aa aa pos length	distance	status	chr	pos
chr9:113413799	C C	T T	1	a0001c0014 a0001c0014	1	HG04204.hp1 HG04204.hp1	synonymous_variant	LOW	c.192C>T c.192C>T	p.Ser64Ser p.Ser64Ser	C9orf43	ENSG00000157653.12	transcript	ENST00000374165.6	protein_coding	3/14	496/1994	192/1386	64/461			chr9	113413799

chr:pos	ref	alt	# # of thapid:transcript level	thapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	pos
chr9:113410858	C C	G G	1	a0012c0007t0008 a0012c0007t0008	1	HG04199.hp2 HG04199.hp2	5_prime_UTR_variant	MODIFIER	c.-193C>G c.-193C>G	C9orf43	ENSG00000157653.12	transcript	ENST00000374165.6	protein_coding	1/14	2636		chr9	113410858
chr9:113410901	T T	A A	2	a0003c0003t0002 a0009c0011t0002 a0003c0003t0002 a0009c0011t0002	8	HG02132.hp1 HG02148.hp2 HG03490.hp2 others(5): Show HG02132.hp1 HG02148.hp2 HG03490.hp2 HG03688.hp1 HG03688.hp2 NA18955.hp1 NA18983.hp1 NA20805.hp2	5_prime_UTR_variant	MODIFIER	c.-150T>A c.-150T>A	C9orf43	ENSG00000157653.12	transcript	ENST00000374165.6	protein_coding	1/14	2593		chr9	113410901
chr9:113410926	G G	A A	2	a0003c0003t0002 a0009c0011t0002 a0003c0003t0002 a0009c0011t0002	8	HG02132.hp1 HG02148.hp2 HG03490.hp2 others(5): Show HG02132.hp1 HG02148.hp2 HG03490.hp2 HG03688.hp1 HG03688.hp2 NA18955.hp1 NA18983.hp1 NA20805.hp2	5_prime_UTR_variant	MODIFIER	c.-125G>A c.-125G>A	C9orf43	ENSG00000157653.12	transcript	ENST00000374165.6	protein_coding	1/14	2568		chr9	113410926
chr9:113413491	G G	C C	1	a0001c0001t0006 a0001c0001t0006	1	HG02148.hp1 HG02148.hp1	5_prime_UTR_variant	MODIFIER	c.-3G>C c.-3G>C	C9orf43	ENSG00000157653.12	transcript	ENST00000374165.6	protein_coding	2/14	3		chr9	113413491
chr9:113429387	G G	C C	1	a0001c0001t0005 a0001c0001t0005	2	HG02055.hp1 HG02698.hp1 HG02055.hp1 HG02698.hp1	3_prime_UTR_variant	MODIFIER	c.1G>C c.1G>C	C9orf43	ENSG00000157653.12	transcript	ENST00000374165.6	protein_coding	14/14	1		chr9	113429387
chr9:113429531	G G	A A	1	a0001c0001t0007 a0001c0001t0007	1	HG02027.hp2 HG02027.hp2	3_prime_UTR_variant	MODIFIER	c.145G>A c.145G>A	C9orf43	ENSG00000157653.12	transcript	ENST00000374165.6	protein_coding	14/14	145		chr9	113429531
chr9:113429547	G G	T T	1	a0001c0001t0004 a0001c0001t0004	3	HG02615.hp2 HG02970.hp1 HG03540.hp2 HG02615.hp2 HG02970.hp1 HG03540.hp2	3_prime_UTR_variant	MODIFIER	c.161G>T c.161G>T	C9orf43	ENSG00000157653.12	transcript	ENST00000374165.6	protein_coding	14/14	161		chr9	113429547
chr9:113429553	A A	G G	2	a0003c0003t0002 a0009c0011t0002 a0003c0003t0002 a0009c0011t0002	8	HG02132.hp1 HG02148.hp2 HG03490.hp2 others(5): Show HG02132.hp1 HG02148.hp2 HG03490.hp2 HG03688.hp1 HG03688.hp2 NA18955.hp1 NA18983.hp1 NA20805.hp2	3_prime_UTR_variant	MODIFIER	c.167A>G c.167A>G	C9orf43	ENSG00000157653.12	transcript	ENST00000374165.6	protein_coding	14/14	167		chr9	113429553
chr9:113429603	TC TC	T T	1	a0001c0001t0003 a0001c0001t0003	3	NA18982.hp1 NA18982.hp2 NA19081.hp2 NA18982.hp1 NA18982.hp2 NA19081.hp2	3_prime_UTR_variant	MODIFIER	c.221delC c.221delC	C9orf43	ENSG00000157653.12	transcript	ENST00000374165.6	protein_coding	14/14	221	INFO_REALIGN_3_PRIME	chr9	113429603

chr:pos	ref	alt	# # of ghapid:genebody level	ghapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	genename	geneid	featuretype	featureid	genebody_biotype	rank	status	chr	pos
chr9:113411097	A A	G G	1	a0001c0001t0001g0085 a0001c0001t0001g0085	1	NA20129.hp1 NA20129.hp1	intron_variant	MODIFIER	c.-50+96A>G c.-50+96A>G	C9orf43	ENSG00000157653.12	transcript	ENST00000374165.6	protein_coding	1/13		chr9	113411097
chr9:113411302	C C	CT CT	6	a0001c0001t0001g0003 a0001c0001t0001g0018 a0001c0001t0001g0084 others(3): Show a0001c0001t0001g0003 a0001c0001t0001g0018 a0001c0001t0001g0084 a0001c0001t0004g0083 a0012c0007t0008g0003 a0013c0013t0001g0082	24	HG00099.hp1 HG00323.hp2 HG00423.hp1 others(21): Show HG00099.hp1 HG00323.hp2 HG00423.hp1 HG00738.hp2 HG01070.hp2 HG01168.hp2 HG01515.hp2 HG01517.hp2 HG02040.hp1 HG02056.hp1 HG02074.hp2 HG02970.hp1 HG03831.hp1 HG03834.hp2 HG03942.hp2 HG04199.hp2 HG06807.hp2 NA18747.hp1 NA18906.hp2 NA19004.hp1 NA19030.hp2 NA19062.hp1 NA20129.hp2 homoSapiens_chm13v2.hp1	intron_variant	MODIFIER	c.-50+316dupT c.-50+316dupT	C9orf43	ENSG00000157653.12	transcript	ENST00000374165.6	protein_coding	1/13	INFO_REALIGN_3_PRIME	chr9	113411302
chr9:113411339	C C	T T	3	a0003c0003t0002g0006 a0003c0003t0002g0081 a0009c0011t0002g0006 a0003c0003t0002g0006 a0003c0003t0002g0081 a0009c0011t0002g0006	8	HG02132.hp1 HG02148.hp2 HG03490.hp2 others(5): Show HG02132.hp1 HG02148.hp2 HG03490.hp2 HG03688.hp1 HG03688.hp2 NA18955.hp1 NA18983.hp1 NA20805.hp2	intron_variant	MODIFIER	c.-50+338C>T c.-50+338C>T	C9orf43	ENSG00000157653.12	transcript	ENST00000374165.6	protein_coding	1/13		chr9	113411339
chr9:113411429	G G	C C	3	a0003c0003t0002g0006 a0003c0003t0002g0081 a0009c0011t0002g0006 a0003c0003t0002g0006 a0003c0003t0002g0081 a0009c0011t0002g0006	8	HG02132.hp1 HG02148.hp2 HG03490.hp2 others(5): Show HG02132.hp1 HG02148.hp2 HG03490.hp2 HG03688.hp1 HG03688.hp2 NA18955.hp1 NA18983.hp1 NA20805.hp2	intron_variant	MODIFIER	c.-50+428G>C c.-50+428G>C	C9orf43	ENSG00000157653.12	transcript	ENST00000374165.6	protein_coding	1/13		chr9	113411429
chr9:113411455	C C	A A	1	a0001c0001t0001g0029 a0001c0001t0001g0029	1	HG01081.hp1 HG01081.hp1	intron_variant	MODIFIER	c.-50+454C>A c.-50+454C>A	C9orf43	ENSG00000157653.12	transcript	ENST00000374165.6	protein_coding	1/13		chr9	113411455
chr9:113411495	T T	C C	1	a0001c0001t0001g0030 a0001c0001t0001g0030	1	NA20905.hp1 NA20905.hp1	intron_variant	MODIFIER	c.-50+494T>C c.-50+494T>C	C9orf43	ENSG00000157653.12	transcript	ENST00000374165.6	protein_coding	1/13		chr9	113411495
chr9:113411703	G G	A A	3	a0003c0003t0002g0006 a0003c0003t0002g0081 a0009c0011t0002g0006 a0003c0003t0002g0006 a0003c0003t0002g0081 a0009c0011t0002g0006	8	HG02132.hp1 HG02148.hp2 HG03490.hp2 others(5): Show HG02132.hp1 HG02148.hp2 HG03490.hp2 HG03688.hp1 HG03688.hp2 NA18955.hp1 NA18983.hp1 NA20805.hp2	intron_variant	MODIFIER	c.-50+702G>A c.-50+702G>A	C9orf43	ENSG00000157653.12	transcript	ENST00000374165.6	protein_coding	1/13		chr9	113411703
chr9:113411734	A A	C C	2	a0001c0001t0001g0080 a0001c0001t0001g0085 a0001c0001t0001g0080 a0001c0001t0001g0085	2	HG02922.hp2 NA20129.hp1 HG02922.hp2 NA20129.hp1	intron_variant	MODIFIER	c.-50+733A>C c.-50+733A>C	C9orf43	ENSG00000157653.12	transcript	ENST00000374165.6	protein_coding	1/13		chr9	113411734
chr9:113411858	C C	T T	1	a0001c0001t0001g0028 a0001c0001t0001g0028	2	HG01433.hp1 HG02273.hp2 HG01433.hp1 HG02273.hp2	intron_variant	MODIFIER	c.-50+857C>T c.-50+857C>T	C9orf43	ENSG00000157653.12	transcript	ENST00000374165.6	protein_coding	1/13		chr9	113411858
chr9:113411976	C C	G G	4	a0001c0001t0001g0007 a0001c0001t0001g0017 a0001c0001t0001g0078 others(1): Show a0001c0001t0001g0007 a0001c0001t0001g0017 a0001c0001t0001g0078 a0001c0001t0001g0079	10	HG02109.hp1 HG02572.hp2 HG02723.hp2 others(7): Show HG02109.hp1 HG02572.hp2 HG02723.hp2 HG02818.hp1 HG02886.hp2 HG02896.hp2 HG02897.hp2 HG02976.hp2 HG03225.hp2 NA20300.hp2	intron_variant	MODIFIER	c.-50+975C>G c.-50+975C>G	C9orf43	ENSG00000157653.12	transcript	ENST00000374165.6	protein_coding	1/13		chr9	113411976
chr9:113412130	A A	G G	3	a0003c0003t0002g0006 a0003c0003t0002g0081 a0009c0011t0002g0006 a0003c0003t0002g0006 a0003c0003t0002g0081 a0009c0011t0002g0006	8	HG02132.hp1 HG02148.hp2 HG03490.hp2 others(5): Show HG02132.hp1 HG02148.hp2 HG03490.hp2 HG03688.hp1 HG03688.hp2 NA18955.hp1 NA18983.hp1 NA20805.hp2	intron_variant	MODIFIER	c.-50+1129A>G c.-50+1129A>G	C9orf43	ENSG00000157653.12	transcript	ENST00000374165.6	protein_coding	1/13		chr9	113412130
chr9:113412171	A A	G G	1	a0001c0001t0001g0077 a0001c0001t0001g0077	1	NA19006.hp1 NA19006.hp1	intron_variant	MODIFIER	c.-50+1170A>G c.-50+1170A>G	C9orf43	ENSG00000157653.12	transcript	ENST00000374165.6	protein_coding	1/13		chr9	113412171
chr9:113412243	G G	A A	2	a0001c0001t0005g0031 a0001c0001t0005g0032 a0001c0001t0005g0031 a0001c0001t0005g0032	2	HG02055.hp1 HG02698.hp1 HG02055.hp1 HG02698.hp1	intron_variant	MODIFIER	c.-49-1202G>A c.-49-1202G>A	C9orf43	ENSG00000157653.12	transcript	ENST00000374165.6	protein_coding	1/13		chr9	113412243
chr9:113412333	G G	A A	2	a0001c0001t0001g0009 a0001c0001t0001g0033 a0001c0001t0001g0009 a0001c0001t0001g0033	4	HG02055.hp2 HG02717.hp1 HG02886.hp1 others(1): Show HG02055.hp2 HG02717.hp1 HG02886.hp1 HG03098.hp2	intron_variant	MODIFIER	c.-49-1112G>A c.-49-1112G>A	C9orf43	ENSG00000157653.12	transcript	ENST00000374165.6	protein_coding	1/13		chr9	113412333
chr9:113412578	G G	C C	1	a0004c0004t0001g0019 a0004c0004t0001g0019	2	HG02280.hp2 HG03139.hp2 HG02280.hp2 HG03139.hp2	intron_variant	MODIFIER	c.-49-867G>C c.-49-867G>C	C9orf43	ENSG00000157653.12	transcript	ENST00000374165.6	protein_coding	1/13		chr9	113412578
chr9:113412618	C C	T T	1	a0001c0001t0001g0076 a0001c0001t0001g0076	1	NA18966.hp2 NA18966.hp2	intron_variant	MODIFIER	c.-49-827C>T c.-49-827C>T	C9orf43	ENSG00000157653.12	transcript	ENST00000374165.6	protein_coding	1/13		chr9	113412618
chr9:113412699	A A	G G	1	a0001c0001t0001g0077 a0001c0001t0001g0077	1	NA19006.hp1 NA19006.hp1	intron_variant	MODIFIER	c.-49-746A>G c.-49-746A>G	C9orf43	ENSG00000157653.12	transcript	ENST00000374165.6	protein_coding	1/13		chr9	113412699
chr9:113412797	C C	A A	3	a0003c0003t0002g0006 a0003c0003t0002g0081 a0009c0011t0002g0006 a0003c0003t0002g0006 a0003c0003t0002g0081 a0009c0011t0002g0006	8	HG02132.hp1 HG02148.hp2 HG03490.hp2 others(5): Show HG02132.hp1 HG02148.hp2 HG03490.hp2 HG03688.hp1 HG03688.hp2 NA18955.hp1 NA18983.hp1 NA20805.hp2	intron_variant	MODIFIER	c.-49-648C>A c.-49-648C>A	C9orf43	ENSG00000157653.12	transcript	ENST00000374165.6	protein_coding	1/13		chr9	113412797
chr9:113412829	A A	G G	1	a0001c0001t0001g0079 a0001c0001t0001g0079	1	HG02572.hp2 HG02572.hp2	intron_variant	MODIFIER	c.-49-616A>G c.-49-616A>G	C9orf43	ENSG00000157653.12	transcript	ENST00000374165.6	protein_coding	1/13		chr9	113412829
chr9:113412967	T T	G G	1	a0004c0004t0001g0019 a0004c0004t0001g0019	2	HG02280.hp2 HG03139.hp2 HG02280.hp2 HG03139.hp2	intron_variant	MODIFIER	c.-49-478T>G c.-49-478T>G	C9orf43	ENSG00000157653.12	transcript	ENST00000374165.6	protein_coding	1/13		chr9	113412967
chr9:113413000	G G	A A	1	a0001c0001t0001g0034 a0001c0001t0001g0034	1	HG00597.hp1 HG00597.hp1	intron_variant	MODIFIER	c.-49-445G>A c.-49-445G>A	C9orf43	ENSG00000157653.12	transcript	ENST00000374165.6	protein_coding	1/13		chr9	113413000
chr9:113413042	C C	A A	1	a0001c0001t0001g0020 a0001c0001t0001g0020	2	NA18949.hp1 NA19091.hp1 NA18949.hp1 NA19091.hp1	intron_variant	MODIFIER	c.-49-403C>A c.-49-403C>A	C9orf43	ENSG00000157653.12	transcript	ENST00000374165.6	protein_coding	1/13		chr9	113413042
chr9:113413055	C C	T T	3	a0001c0001t0001g0075 a0001c0001t0005g0031 a0001c0001t0005g0032 a0001c0001t0001g0075 a0001c0001t0005g0031 a0001c0001t0005g0032	3	HG02055.hp1 HG02698.hp1 NA19004.hp2 HG02055.hp1 HG02698.hp1 NA19004.hp2	intron_variant	MODIFIER	c.-49-390C>T c.-49-390C>T	C9orf43	ENSG00000157653.12	transcript	ENST00000374165.6	protein_coding	1/13		chr9	113413055
chr9:113413283	C C	A A	3	a0003c0003t0002g0006 a0003c0003t0002g0081 a0009c0011t0002g0006 a0003c0003t0002g0006 a0003c0003t0002g0081 a0009c0011t0002g0006	8	HG02132.hp1 HG02148.hp2 HG03490.hp2 others(5): Show HG02132.hp1 HG02148.hp2 HG03490.hp2 HG03688.hp1 HG03688.hp2 NA18955.hp1 NA18983.hp1 NA20805.hp2	intron_variant	MODIFIER	c.-49-162C>A c.-49-162C>A	C9orf43	ENSG00000157653.12	transcript	ENST00000374165.6	protein_coding	1/13		chr9	113413283
chr9:113414100	G G	A A	4	a0001c0001t0001g0010 a0001c0001t0001g0018 a0001c0001t0001g0035 others(1): Show a0001c0001t0001g0010 a0001c0001t0001g0018 a0001c0001t0001g0035 a0011c0010t0001g0010	7	HG01243.hp1 HG02572.hp1 HG03041.hp1 others(4): Show HG01243.hp1 HG02572.hp1 HG03041.hp1 HG03516.hp2 HG06807.hp2 NA18906.hp2 NA20129.hp2	intron_variant	MODIFIER	c.287+206G>A c.287+206G>A	C9orf43	ENSG00000157653.12	transcript	ENST00000374165.6	protein_coding	3/13		chr9	113414100
chr9:113414104	G G	A A	1	a0001c0001t0001g0036 a0001c0001t0001g0036	1	HG03130.hp1 HG03130.hp1	intron_variant	MODIFIER	c.287+210G>A c.287+210G>A	C9orf43	ENSG00000157653.12	transcript	ENST00000374165.6	protein_coding	3/13		chr9	113414104
chr9:113414353	C C	T T	1	a0001c0001t0001g0027 a0001c0001t0001g0027	2	NA18983.hp2 NA19081.hp1 NA18983.hp2 NA19081.hp1	intron_variant	MODIFIER	c.287+459C>T c.287+459C>T	C9orf43	ENSG00000157653.12	transcript	ENST00000374165.6	protein_coding	3/13		chr9	113414353
chr9:113414377	C C	T T	1	a0001c0001t0001g0033 a0001c0001t0001g0033	1	HG02717.hp1 HG02717.hp1	intron_variant	MODIFIER	c.287+483C>T c.287+483C>T	C9orf43	ENSG00000157653.12	transcript	ENST00000374165.6	protein_coding	3/13		chr9	113414377
chr9:113414412	C C	T T	1	a0001c0001t0001g0074 a0001c0001t0001g0074	1	HG02809.hp1 HG02809.hp1	intron_variant	MODIFIER	c.287+518C>T c.287+518C>T	C9orf43	ENSG00000157653.12	transcript	ENST00000374165.6	protein_coding	3/13		chr9	113414412
chr9:113414432	G G	A A	3	a0003c0003t0002g0006 a0003c0003t0002g0081 a0009c0011t0002g0006 a0003c0003t0002g0006 a0003c0003t0002g0081 a0009c0011t0002g0006	8	HG02132.hp1 HG02148.hp2 HG03490.hp2 others(5): Show HG02132.hp1 HG02148.hp2 HG03490.hp2 HG03688.hp1 HG03688.hp2 NA18955.hp1 NA18983.hp1 NA20805.hp2	intron_variant	MODIFIER	c.287+538G>A c.287+538G>A	C9orf43	ENSG00000157653.12	transcript	ENST00000374165.6	protein_coding	3/13		chr9	113414432
chr9:113414498	C C	T T	2	a0001c0001t0001g0080 a0001c0001t0001g0085 a0001c0001t0001g0080 a0001c0001t0001g0085	2	HG02922.hp2 NA20129.hp1 HG02922.hp2 NA20129.hp1	intron_variant	MODIFIER	c.287+604C>T c.287+604C>T	C9orf43	ENSG00000157653.12	transcript	ENST00000374165.6	protein_coding	3/13		chr9	113414498
chr9:113414767	C C	CA CA	25	a0001c0001t0001g0010 a0001c0001t0001g0018 a0001c0001t0001g0021 others(22): Show a0001c0001t0001g0010 a0001c0001t0001g0018 a0001c0001t0001g0021 a0001c0001t0001g0022 a0001c0001t0001g0035 a0001c0001t0001g0036 a0001c0001t0001g0080 a0001c0001t0001g0085 a0001c0001t0005g0031 a0001c0001t0005g0032 a0002c0002t0001g0004 a0002c0002t0001g0011 a0002c0002t0001g0012 a0002c0002t0001g0037 a0002c0002t0001g0038 a0003c0003t0002g0006 a0003c0003t0002g0081 a0004c0004t0001g0013 a0004c0004t0001g0019 a0004c0004t0001g0023 a0007c0008t0001g0004 a0008c0012t0001g0013 a0009c0011t0002g0006 a0011c0010t0001g0010 a0013c0013t0001g0082	51	HG00140.hp2 HG00735.hp1 HG00738.hp1 others(48): Show HG00140.hp2 HG00735.hp1 HG00738.hp1 HG00741.hp2 HG01099.hp1 HG01106.hp1 HG01167.hp2 HG01168.hp1 HG01192.hp1 HG01243.hp1 HG01261.hp1 HG01261.hp2 HG01516.hp1 HG01517.hp1 HG01884.hp2 HG01978.hp2 HG02055.hp1 HG02132.hp1 HG02145.hp1 HG02148.hp2 HG02280.hp2 HG02572.hp1 HG02698.hp1 HG02818.hp2 HG02895.hp1 HG02895.hp2 HG02896.hp1 HG02897.hp1 HG02922.hp2 HG02970.hp2 HG03017.hp1 HG03041.hp1 HG03041.hp2 HG03098.hp1 HG03130.hp1 HG03139.hp2 HG03490.hp2 HG03516.hp2 HG03540.hp1 HG03688.hp1 HG03688.hp2 HG04228.hp1 HG06807.hp2 NA18522.hp1 NA18906.hp2 NA18955.hp1 NA18983.hp1 NA19030.hp2 NA20129.hp1 NA20129.hp2 NA20805.hp2	intron_variant	MODIFIER	c.287+873_287+874ins others(1): Show c.287+873_287+874insA	C9orf43	ENSG00000157653.12	transcript	ENST00000374165.6	protein_coding	3/13		chr9	113414767
chr9:113414976	C C	A A	1	a0006c0006t0001g0039 a0006c0006t0001g0039	1	HG00639.hp2 HG00639.hp2	intron_variant	MODIFIER	c.287+1082C>A c.287+1082C>A	C9orf43	ENSG00000157653.12	transcript	ENST00000374165.6	protein_coding	3/13		chr9	113414976
chr9:113415224	A A	G G	1	a0004c0004t0001g0023 a0004c0004t0001g0023	2	HG03098.hp1 NA18522.hp1 HG03098.hp1 NA18522.hp1	intron_variant	MODIFIER	c.287+1330A>G c.287+1330A>G	C9orf43	ENSG00000157653.12	transcript	ENST00000374165.6	protein_coding	3/13		chr9	113415224
chr9:113415251	C C	G G	1	a0001c0001t0001g0073 a0001c0001t0001g0073	1	HG02145.hp2 HG02145.hp2	intron_variant	MODIFIER	c.287+1357C>G c.287+1357C>G	C9orf43	ENSG00000157653.12	transcript	ENST00000374165.6	protein_coding	3/13		chr9	113415251
chr9:113415305	G G	A A	4	a0002c0002t0001g0004 a0002c0002t0001g0037 a0002c0002t0001g0038 others(1): Show a0002c0002t0001g0004 a0002c0002t0001g0037 a0002c0002t0001g0038 a0007c0008t0001g0004	13	HG00140.hp2 HG00738.hp1 HG00741.hp2 others(10): Show HG00140.hp2 HG00738.hp1 HG00741.hp2 HG01099.hp1 HG01106.hp1 HG01167.hp2 HG01168.hp1 HG01261.hp1 HG01516.hp1 HG01517.hp1 HG02896.hp1 HG03017.hp1 HG04228.hp1	intron_variant	MODIFIER	c.287+1411G>A c.287+1411G>A	C9orf43	ENSG00000157653.12	transcript	ENST00000374165.6	protein_coding	3/13		chr9	113415305
chr9:113415327	A A	G G	1	a0004c0004t0001g0019 a0004c0004t0001g0019	2	HG02280.hp2 HG03139.hp2 HG02280.hp2 HG03139.hp2	intron_variant	MODIFIER	c.287+1433A>G c.287+1433A>G	C9orf43	ENSG00000157653.12	transcript	ENST00000374165.6	protein_coding	3/13		chr9	113415327
chr9:113415426	T T	C C	1	a0001c0001t0001g0040 a0001c0001t0001g0040	1	HG03669.hp1 HG03669.hp1	intron_variant	MODIFIER	c.287+1532T>C c.287+1532T>C	C9orf43	ENSG00000157653.12	transcript	ENST00000374165.6	protein_coding	3/13		chr9	113415426
chr9:113415651	C C	G G	8	a0001c0001t0001g0010 a0001c0001t0001g0018 a0001c0001t0001g0035 others(5): Show a0001c0001t0001g0010 a0001c0001t0001g0018 a0001c0001t0001g0035 a0001c0001t0001g0036 a0004c0004t0001g0013 a0004c0004t0001g0023 a0008c0012t0001g0013 a0011c0010t0001g0010	13	HG01243.hp1 HG02572.hp1 HG02818.hp2 others(10): Show HG01243.hp1 HG02572.hp1 HG02818.hp2 HG02970.hp2 HG03041.hp1 HG03041.hp2 HG03098.hp1 HG03130.hp1 HG03516.hp2 HG06807.hp2 NA18522.hp1 NA18906.hp2 NA20129.hp2	intron_variant	MODIFIER	c.287+1757C>G c.287+1757C>G	C9orf43	ENSG00000157653.12	transcript	ENST00000374165.6	protein_coding	3/13		chr9	113415651
chr9:113416157	G G	A A	1	a0001c0001t0001g0077 a0001c0001t0001g0077	1	NA19006.hp1 NA19006.hp1	intron_variant	MODIFIER	c.287+2263G>A c.287+2263G>A	C9orf43	ENSG00000157653.12	transcript	ENST00000374165.6	protein_coding	3/13		chr9	113416157
chr9:113416188	T T	C C	2	a0001c0001t0001g0008 a0001c0001t0001g0041 a0001c0001t0001g0008 a0001c0001t0001g0041	5	HG00733.hp2 HG01099.hp2 HG01256.hp2 others(2): Show HG00733.hp2 HG01099.hp2 HG01256.hp2 HG01258.hp2 HG01993.hp2	intron_variant	MODIFIER	c.287+2294T>C c.287+2294T>C	C9orf43	ENSG00000157653.12	transcript	ENST00000374165.6	protein_coding	3/13		chr9	113416188
chr9:113416822	C C	T T	3	a0004c0004t0001g0013 a0004c0004t0001g0023 a0008c0012t0001g0013 a0004c0004t0001g0013 a0004c0004t0001g0023 a0008c0012t0001g0013	5	HG02818.hp2 HG02970.hp2 HG03041.hp2 others(2): Show HG02818.hp2 HG02970.hp2 HG03041.hp2 HG03098.hp1 NA18522.hp1	intron_variant	MODIFIER	c.288-2286C>T c.288-2286C>T	C9orf43	ENSG00000157653.12	transcript	ENST00000374165.6	protein_coding	3/13		chr9	113416822
chr9:113417085	G G	A A	3	a0003c0003t0002g0006 a0003c0003t0002g0081 a0009c0011t0002g0006 a0003c0003t0002g0006 a0003c0003t0002g0081 a0009c0011t0002g0006	8	HG02132.hp1 HG02148.hp2 HG03490.hp2 others(5): Show HG02132.hp1 HG02148.hp2 HG03490.hp2 HG03688.hp1 HG03688.hp2 NA18955.hp1 NA18983.hp1 NA20805.hp2	intron_variant	MODIFIER	c.288-2023G>A c.288-2023G>A	C9orf43	ENSG00000157653.12	transcript	ENST00000374165.6	protein_coding	3/13		chr9	113417085
chr9:113417085	G G	C C	1	a0001c0001t0001g0042 a0001c0001t0001g0042	1	HG02735.hp2 HG02735.hp2	intron_variant	MODIFIER	c.288-2023G>C c.288-2023G>C	C9orf43	ENSG00000157653.12	transcript	ENST00000374165.6	protein_coding	3/13		chr9	113417085
chr9:113417376	A A	G G	1	a0001c0001t0001g0072 a0001c0001t0001g0072	1	HG02451.hp1 HG02451.hp1	intron_variant	MODIFIER	c.288-1732A>G c.288-1732A>G	C9orf43	ENSG00000157653.12	transcript	ENST00000374165.6	protein_coding	3/13		chr9	113417376
chr9:113417416	A A	G G	1	a0001c0001t0001g0071 a0001c0001t0001g0071	1	NA18979.hp1 NA18979.hp1	intron_variant	MODIFIER	c.288-1692A>G c.288-1692A>G	C9orf43	ENSG00000157653.12	transcript	ENST00000374165.6	protein_coding	3/13		chr9	113417416
chr9:113417678	G G	T T	1	a0001c0001t0001g0070 a0001c0001t0001g0070	1	HG03195.hp2 HG03195.hp2	intron_variant	MODIFIER	c.288-1430G>T c.288-1430G>T	C9orf43	ENSG00000157653.12	transcript	ENST00000374165.6	protein_coding	3/13		chr9	113417678
chr9:113417737	G G	A A	1	a0001c0001t0001g0043 a0001c0001t0001g0043	1	HG03942.hp1 HG03942.hp1	intron_variant	MODIFIER	c.288-1371G>A c.288-1371G>A	C9orf43	ENSG00000157653.12	transcript	ENST00000374165.6	protein_coding	3/13		chr9	113417737
chr9:113417739	A A	G G	1	a0001c0001t0001g0069 a0001c0001t0001g0069	1	HG02257.hp2 HG02257.hp2	intron_variant	MODIFIER	c.288-1369A>G c.288-1369A>G	C9orf43	ENSG00000157653.12	transcript	ENST00000374165.6	protein_coding	3/13		chr9	113417739
chr9:113418282	G G	T T	1	a0004c0004t0001g0019 a0004c0004t0001g0019	2	HG02280.hp2 HG03139.hp2 HG02280.hp2 HG03139.hp2	intron_variant	MODIFIER	c.288-826G>T c.288-826G>T	C9orf43	ENSG00000157653.12	transcript	ENST00000374165.6	protein_coding	3/13		chr9	113418282
chr9:113418293	A A	G G	3	a0003c0003t0002g0006 a0003c0003t0002g0081 a0009c0011t0002g0006 a0003c0003t0002g0006 a0003c0003t0002g0081 a0009c0011t0002g0006	8	HG02132.hp1 HG02148.hp2 HG03490.hp2 others(5): Show HG02132.hp1 HG02148.hp2 HG03490.hp2 HG03688.hp1 HG03688.hp2 NA18955.hp1 NA18983.hp1 NA20805.hp2	intron_variant	MODIFIER	c.288-815A>G c.288-815A>G	C9orf43	ENSG00000157653.12	transcript	ENST00000374165.6	protein_coding	3/13		chr9	113418293
chr9:113418807	CTTAATA CTTAATA	C C	3	a0001c0001t0001g0010 a0001c0001t0001g0035 a0011c0010t0001g0010 a0001c0001t0001g0010 a0001c0001t0001g0035 a0011c0010t0001g0010	4	HG01243.hp1 HG02572.hp1 HG03041.hp1 others(1): Show HG01243.hp1 HG02572.hp1 HG03041.hp1 HG03516.hp2	intron_variant	MODIFIER	c.288-296_288-291del others(6): Show c.288-296_288-291delTATTAA	C9orf43	ENSG00000157653.12	transcript	ENST00000374165.6	protein_coding	3/13	INFO_REALIGN_3_PRIME	chr9	113418807
chr9:113419232	G G	A A	1	a0001c0001t0001g0044 a0001c0001t0001g0044	1	HG02615.hp1 HG02615.hp1	intron_variant	MODIFIER	c.345+67G>A c.345+67G>A	C9orf43	ENSG00000157653.12	transcript	ENST00000374165.6	protein_coding	4/13		chr9	113419232
chr9:113419388	A A	G G	1	a0001c0001t0001g0022 a0001c0001t0001g0022	2	HG02895.hp1 HG02897.hp1 HG02895.hp1 HG02897.hp1	intron_variant	MODIFIER	c.345+223A>G c.345+223A>G	C9orf43	ENSG00000157653.12	transcript	ENST00000374165.6	protein_coding	4/13		chr9	113419388
chr9:113419398	C C	T T	1	a0001c0001t0001g0068 a0001c0001t0001g0068	1	HG03654.hp1 HG03654.hp1	intron_variant	MODIFIER	c.345+233C>T c.345+233C>T	C9orf43	ENSG00000157653.12	transcript	ENST00000374165.6	protein_coding	4/13		chr9	113419398
chr9:113419455	A A	G G	1	a0001c0001t0001g0067 a0001c0001t0001g0067	1	NA19011.hp1 NA19011.hp1	intron_variant	MODIFIER	c.345+290A>G c.345+290A>G	C9orf43	ENSG00000157653.12	transcript	ENST00000374165.6	protein_coding	4/13		chr9	113419455
chr9:113419463	G G	A A	3	a0003c0003t0002g0006 a0003c0003t0002g0081 a0009c0011t0002g0006 a0003c0003t0002g0006 a0003c0003t0002g0081 a0009c0011t0002g0006	8	HG02132.hp1 HG02148.hp2 HG03490.hp2 others(5): Show HG02132.hp1 HG02148.hp2 HG03490.hp2 HG03688.hp1 HG03688.hp2 NA18955.hp1 NA18983.hp1 NA20805.hp2	intron_variant	MODIFIER	c.345+298G>A c.345+298G>A	C9orf43	ENSG00000157653.12	transcript	ENST00000374165.6	protein_coding	4/13		chr9	113419463
chr9:113419619	G G	GAGTTATA GAGTTATA	3	a0003c0003t0002g0006 a0003c0003t0002g0081 a0009c0011t0002g0006 a0003c0003t0002g0006 a0003c0003t0002g0081 a0009c0011t0002g0006	8	HG02132.hp1 HG02148.hp2 HG03490.hp2 others(5): Show HG02132.hp1 HG02148.hp2 HG03490.hp2 HG03688.hp1 HG03688.hp2 NA18955.hp1 NA18983.hp1 NA20805.hp2	intron_variant	MODIFIER	c.345+454_345+455ins others(7): Show c.345+454_345+455insAGTTATA	C9orf43	ENSG00000157653.12	transcript	ENST00000374165.6	protein_coding	4/13		chr9	113419619
chr9:113419620	C C	T T	3	a0003c0003t0002g0006 a0003c0003t0002g0081 a0009c0011t0002g0006 a0003c0003t0002g0006 a0003c0003t0002g0081 a0009c0011t0002g0006	8	HG02132.hp1 HG02148.hp2 HG03490.hp2 others(5): Show HG02132.hp1 HG02148.hp2 HG03490.hp2 HG03688.hp1 HG03688.hp2 NA18955.hp1 NA18983.hp1 NA20805.hp2	intron_variant	MODIFIER	c.345+455C>T c.345+455C>T	C9orf43	ENSG00000157653.12	transcript	ENST00000374165.6	protein_coding	4/13		chr9	113419620
chr9:113419704	T T	G G	1	a0001c0001t0001g0040 a0001c0001t0001g0040	1	HG03669.hp1 HG03669.hp1	intron_variant	MODIFIER	c.345+539T>G c.345+539T>G	C9orf43	ENSG00000157653.12	transcript	ENST00000374165.6	protein_coding	4/13		chr9	113419704
chr9:113419724	A A	G G	3	a0001c0001t0001g0065 a0001c0001t0001g0066 a0006c0006t0001g0039 a0001c0001t0001g0065 a0001c0001t0001g0066 a0006c0006t0001g0039	3	HG00639.hp2 HG01256.hp1 NA19030.hp1 HG00639.hp2 HG01256.hp1 NA19030.hp1	intron_variant	MODIFIER	c.345+559A>G c.345+559A>G	C9orf43	ENSG00000157653.12	transcript	ENST00000374165.6	protein_coding	4/13		chr9	113419724
chr9:113419765	G G	A A	2	a0001c0001t0001g0040 a0001c0001t0001g0045 a0001c0001t0001g0040 a0001c0001t0001g0045	2	HG01433.hp2 HG03669.hp1 HG01433.hp2 HG03669.hp1	intron_variant	MODIFIER	c.345+600G>A c.345+600G>A	C9orf43	ENSG00000157653.12	transcript	ENST00000374165.6	protein_coding	4/13		chr9	113419765
chr9:113419806	T T	A A	3	a0003c0003t0002g0006 a0003c0003t0002g0081 a0009c0011t0002g0006 a0003c0003t0002g0006 a0003c0003t0002g0081 a0009c0011t0002g0006	8	HG02132.hp1 HG02148.hp2 HG03490.hp2 others(5): Show HG02132.hp1 HG02148.hp2 HG03490.hp2 HG03688.hp1 HG03688.hp2 NA18955.hp1 NA18983.hp1 NA20805.hp2	intron_variant	MODIFIER	c.345+641T>A c.345+641T>A	C9orf43	ENSG00000157653.12	transcript	ENST00000374165.6	protein_coding	4/13		chr9	113419806
chr9:113419831	A A	T T	1	a0001c0001t0001g0036 a0001c0001t0001g0036	1	HG03130.hp1 HG03130.hp1	intron_variant	MODIFIER	c.345+666A>T c.345+666A>T	C9orf43	ENSG00000157653.12	transcript	ENST00000374165.6	protein_coding	4/13		chr9	113419831
chr9:113419883	A A	T T	1	a0004c0004t0001g0019 a0004c0004t0001g0019	2	HG02280.hp2 HG03139.hp2 HG02280.hp2 HG03139.hp2	intron_variant	MODIFIER	c.345+718A>T c.345+718A>T	C9orf43	ENSG00000157653.12	transcript	ENST00000374165.6	protein_coding	4/13		chr9	113419883
chr9:113419891	T T	C C	1	a0001c0001t0001g0046 a0001c0001t0001g0046	1	NA19010.hp1 NA19010.hp1	intron_variant	MODIFIER	c.345+726T>C c.345+726T>C	C9orf43	ENSG00000157653.12	transcript	ENST00000374165.6	protein_coding	4/13		chr9	113419891
chr9:113420004	A A	C C	1	a0001c0001t0001g0066 a0001c0001t0001g0066	1	HG01256.hp1 HG01256.hp1	intron_variant	MODIFIER	c.345+839A>C c.345+839A>C	C9orf43	ENSG00000157653.12	transcript	ENST00000374165.6	protein_coding	4/13		chr9	113420004
chr9:113420215	C C	T T	1	a0001c0001t0001g0064 a0001c0001t0001g0064	1	NA19085.hp1 NA19085.hp1	intron_variant	MODIFIER	c.346-888C>T c.346-888C>T	C9orf43	ENSG00000157653.12	transcript	ENST00000374165.6	protein_coding	4/13		chr9	113420215
chr9:113420253	T T	C C	2	a0001c0001t0001g0014 a0001c0001t0003g0014 a0001c0001t0001g0014 a0001c0001t0003g0014	3	NA18612.hp1 NA18982.hp2 NA19081.hp2 NA18612.hp1 NA18982.hp2 NA19081.hp2	intron_variant	MODIFIER	c.346-850T>C c.346-850T>C	C9orf43	ENSG00000157653.12	transcript	ENST00000374165.6	protein_coding	4/13		chr9	113420253
chr9:113420484	A A	G G	1	a0001c0001t0001g0063 a0001c0001t0001g0063	1	HG03209.hp1 HG03209.hp1	intron_variant	MODIFIER	c.346-619A>G c.346-619A>G	C9orf43	ENSG00000157653.12	transcript	ENST00000374165.6	protein_coding	4/13		chr9	113420484
chr9:113420499	A A	G G	3	a0001c0001t0001g0005 a0001c0001t0001g0067 a0001c0001t0001g0071 a0001c0001t0001g0005 a0001c0001t0001g0067 a0001c0001t0001g0071	10	NA18946.hp2 NA18965.hp1 NA18979.hp1 others(7): Show NA18946.hp2 NA18965.hp1 NA18979.hp1 NA18980.hp1 NA18984.hp2 NA18998.hp2 NA19011.hp1 NA19012.hp2 NA19064.hp1 NA19091.hp2	intron_variant	MODIFIER	c.346-604A>G c.346-604A>G	C9orf43	ENSG00000157653.12	transcript	ENST00000374165.6	protein_coding	4/13		chr9	113420499
chr9:113420529	T T	A A	1	a0001c0001t0001g0036 a0001c0001t0001g0036	1	HG03130.hp1 HG03130.hp1	intron_variant	MODIFIER	c.346-574T>A c.346-574T>A	C9orf43	ENSG00000157653.12	transcript	ENST00000374165.6	protein_coding	4/13		chr9	113420529
chr9:113420603	A A	AG AG	3	a0003c0003t0002g0006 a0003c0003t0002g0081 a0009c0011t0002g0006 a0003c0003t0002g0006 a0003c0003t0002g0081 a0009c0011t0002g0006	8	HG02132.hp1 HG02148.hp2 HG03490.hp2 others(5): Show HG02132.hp1 HG02148.hp2 HG03490.hp2 HG03688.hp1 HG03688.hp2 NA18955.hp1 NA18983.hp1 NA20805.hp2	intron_variant	MODIFIER	c.346-500_346-499ins others(1): Show c.346-500_346-499insG	C9orf43	ENSG00000157653.12	transcript	ENST00000374165.6	protein_coding	4/13		chr9	113420603
chr9:113420619	A A	C C	3	a0003c0003t0002g0006 a0003c0003t0002g0081 a0009c0011t0002g0006 a0003c0003t0002g0006 a0003c0003t0002g0081 a0009c0011t0002g0006	8	HG02132.hp1 HG02148.hp2 HG03490.hp2 others(5): Show HG02132.hp1 HG02148.hp2 HG03490.hp2 HG03688.hp1 HG03688.hp2 NA18955.hp1 NA18983.hp1 NA20805.hp2	intron_variant	MODIFIER	c.346-484A>C c.346-484A>C	C9orf43	ENSG00000157653.12	transcript	ENST00000374165.6	protein_coding	4/13		chr9	113420619
chr9:113420774	G G	A A	1	a0001c0001t0001g0047 a0001c0001t0001g0047	1	HG03139.hp1 HG03139.hp1	intron_variant	MODIFIER	c.346-329G>A c.346-329G>A	C9orf43	ENSG00000157653.12	transcript	ENST00000374165.6	protein_coding	4/13		chr9	113420774
chr9:113420966	A A	G G	1	a0001c0001t0001g0040 a0001c0001t0001g0040	1	HG03669.hp1 HG03669.hp1	intron_variant	MODIFIER	c.346-137A>G c.346-137A>G	C9orf43	ENSG00000157653.12	transcript	ENST00000374165.6	protein_coding	4/13		chr9	113420966
chr9:113421021	G G	A A	31	a0001c0001t0001g0002 a0001c0001t0001g0003 a0001c0001t0001g0007 others(28): Show a0001c0001t0001g0002 a0001c0001t0001g0003 a0001c0001t0001g0007 a0001c0001t0001g0009 a0001c0001t0001g0015 a0001c0001t0001g0016 a0001c0001t0001g0017 a0001c0001t0001g0020 a0001c0001t0001g0022 a0001c0001t0001g0025 a0001c0001t0001g0033 a0001c0001t0001g0044 a0001c0001t0001g0048 a0001c0001t0001g0049 a0001c0001t0001g0050 a0001c0001t0001g0051 a0001c0001t0001g0052 a0001c0001t0001g0053 a0001c0001t0001g0074 a0001c0001t0001g0079 a0001c0001t0001g0084 a0001c0001t0004g0024 a0001c0001t0004g0083 a0001c0001t0005g0031 a0001c0001t0005g0032 a0003c0003t0002g0006 a0003c0003t0002g0081 a0009c0011t0002g0006 a0010c0009t0001g0002 a0012c0007t0008g0003 a0013c0013t0001g0082	110	HG00099.hp1 HG00323.hp2 HG00423.hp1 others(107): Show HG00099.hp1 HG00323.hp2 HG00423.hp1 HG00544.hp1 HG00558.hp1 HG00639.hp1 HG00738.hp2 HG00741.hp1 HG01070.hp2 HG01081.hp2 HG01109.hp1 HG01123.hp1 HG01168.hp2 HG01169.hp2 HG01175.hp1 HG01358.hp1 HG01515.hp2 HG01516.hp2 HG01517.hp2 HG01891.hp2 HG01934.hp2 HG02027.hp1 HG02040.hp1 HG02055.hp1 HG02055.hp2 HG02056.hp1 HG02074.hp2 HG02109.hp1 HG02132.hp1 HG02132.hp2 HG02148.hp2 HG02300.hp1 HG02486.hp1 HG02559.hp1 HG02572.hp2 HG02615.hp1 HG02615.hp2 HG02622.hp1 HG02622.hp2 HG02698.hp1 HG02717.hp1 HG02723.hp1 HG02723.hp2 HG02809.hp1 HG02809.hp2 HG02886.hp1 HG02886.hp2 HG02895.hp1 HG02896.hp2 HG02897.hp1 HG02897.hp2 HG02965.hp2 HG02970.hp1 HG02976.hp2 HG03098.hp2 HG03195.hp1 HG03225.hp2 HG03239.hp1 HG03453.hp1 HG03471.hp2 HG03486.hp1 HG03490.hp2 HG03540.hp2 HG03579.hp2 HG03688.hp1 HG03688.hp2 HG03831.hp1 HG03831.hp2 HG03834.hp1 HG03834.hp2 HG03942.hp2 HG04199.hp1 HG04199.hp2 HG04204.hp2 HG06807.hp1 NA18747.hp1 NA18906.hp1 NA18941.hp1 NA18949.hp1 NA18951.hp2 NA18954.hp2 NA18955.hp1 NA18962.hp1 NA18971.hp1 NA18974.hp1 NA18975.hp1 NA18980.hp2 NA18983.hp1 NA18984.hp1 NA18985.hp2 NA18987.hp1 NA18994.hp2 NA19004.hp1 NA19006.hp2 NA19007.hp2 NA19030.hp2 NA19058.hp1 NA19062.hp1 NA19066.hp2 NA19067.hp1 NA19072.hp1 NA19074.hp2 NA19088.hp2 NA19091.hp1 NA19240.hp2 NA20300.hp2 NA20805.hp1 NA20805.hp2 NA20905.hp2 homoSapiens_chm13v2.hp1	intron_variant	MODIFIER	c.346-82G>A c.346-82G>A	C9orf43	ENSG00000157653.12	transcript	ENST00000374165.6	protein_coding	4/13		chr9	113421021
chr9:113421229	G G	C C	3	a0003c0003t0002g0006 a0003c0003t0002g0081 a0009c0011t0002g0006 a0003c0003t0002g0006 a0003c0003t0002g0081 a0009c0011t0002g0006	8	HG02132.hp1 HG02148.hp2 HG03490.hp2 others(5): Show HG02132.hp1 HG02148.hp2 HG03490.hp2 HG03688.hp1 HG03688.hp2 NA18955.hp1 NA18983.hp1 NA20805.hp2	intron_variant	MODIFIER	c.446+26G>C c.446+26G>C	C9orf43	ENSG00000157653.12	transcript	ENST00000374165.6	protein_coding	5/13		chr9	113421229
chr9:113421262	G G	T T	1	a0001c0001t0005g0032 a0001c0001t0005g0032	1	HG02698.hp1 HG02698.hp1	intron_variant	MODIFIER	c.446+59G>T c.446+59G>T	C9orf43	ENSG00000157653.12	transcript	ENST00000374165.6	protein_coding	5/13		chr9	113421262
chr9:113421286	A A	C C	1	a0001c0001t0001g0062 a0001c0001t0001g0062	1	HG02559.hp2 HG02559.hp2	intron_variant	MODIFIER	c.446+83A>C c.446+83A>C	C9orf43	ENSG00000157653.12	transcript	ENST00000374165.6	protein_coding	5/13		chr9	113421286
chr9:113421467	T T	C C	1	a0013c0013t0001g0082 a0013c0013t0001g0082	1	NA19030.hp2 NA19030.hp2	intron_variant	MODIFIER	c.446+264T>C c.446+264T>C	C9orf43	ENSG00000157653.12	transcript	ENST00000374165.6	protein_coding	5/13		chr9	113421467
chr9:113421486	A A	G G	1	a0001c0001t0001g0021 a0001c0001t0001g0021	2	HG01978.hp2 HG03540.hp1 HG01978.hp2 HG03540.hp1	intron_variant	MODIFIER	c.446+283A>G c.446+283A>G	C9orf43	ENSG00000157653.12	transcript	ENST00000374165.6	protein_coding	5/13		chr9	113421486
chr9:113421622	A A	G G	3	a0003c0003t0002g0006 a0003c0003t0002g0081 a0009c0011t0002g0006 a0003c0003t0002g0006 a0003c0003t0002g0081 a0009c0011t0002g0006	8	HG02132.hp1 HG02148.hp2 HG03490.hp2 others(5): Show HG02132.hp1 HG02148.hp2 HG03490.hp2 HG03688.hp1 HG03688.hp2 NA18955.hp1 NA18983.hp1 NA20805.hp2	intron_variant	MODIFIER	c.446+419A>G c.446+419A>G	C9orf43	ENSG00000157653.12	transcript	ENST00000374165.6	protein_coding	5/13		chr9	113421622
chr9:113421773	T T	C C	1	a0001c0001t0006g0054 a0001c0001t0006g0054	1	HG02148.hp1 HG02148.hp1	intron_variant	MODIFIER	c.446+570T>C c.446+570T>C	C9orf43	ENSG00000157653.12	transcript	ENST00000374165.6	protein_coding	5/13		chr9	113421773
chr9:113421782	T T	A A	2	a0001c0001t0001g0055 a0001c0001t0001g0056 a0001c0001t0001g0055 a0001c0001t0001g0056	2	HG03492.hp1 HG04115.hp2 HG03492.hp1 HG04115.hp2	intron_variant	MODIFIER	c.446+579T>A c.446+579T>A	C9orf43	ENSG00000157653.12	transcript	ENST00000374165.6	protein_coding	5/13		chr9	113421782
chr9:113421908	A A	C C	1	a0001c0001t0001g0056 a0001c0001t0001g0056	1	HG03492.hp1 HG03492.hp1	intron_variant	MODIFIER	c.447-641A>C c.447-641A>C	C9orf43	ENSG00000157653.12	transcript	ENST00000374165.6	protein_coding	5/13		chr9	113421908
chr9:113421988	G G	A A	1	a0001c0001t0001g0057 a0001c0001t0001g0057	1	NA18995.hp2 NA18995.hp2	intron_variant	MODIFIER	c.447-561G>A c.447-561G>A	C9orf43	ENSG00000157653.12	transcript	ENST00000374165.6	protein_coding	5/13		chr9	113421988
chr9:113422027	C C	T T	7	a0001c0001t0001g0080 a0002c0002t0001g0004 a0002c0002t0001g0011 others(4): Show a0001c0001t0001g0080 a0002c0002t0001g0004 a0002c0002t0001g0011 a0002c0002t0001g0012 a0002c0002t0001g0037 a0002c0002t0001g0038 a0007c0008t0001g0004	20	HG00140.hp2 HG00735.hp1 HG00738.hp1 others(17): Show HG00140.hp2 HG00735.hp1 HG00738.hp1 HG00741.hp2 HG01099.hp1 HG01106.hp1 HG01167.hp2 HG01168.hp1 HG01192.hp1 HG01261.hp1 HG01261.hp2 HG01516.hp1 HG01517.hp1 HG01884.hp2 HG02145.hp1 HG02895.hp2 HG02896.hp1 HG02922.hp2 HG03017.hp1 HG04228.hp1	intron_variant	MODIFIER	c.447-522C>T c.447-522C>T	C9orf43	ENSG00000157653.12	transcript	ENST00000374165.6	protein_coding	5/13		chr9	113422027
chr9:113422082	G G	A A	1	a0001c0001t0004g0024 a0001c0001t0004g0024	2	HG02615.hp2 HG03540.hp2 HG02615.hp2 HG03540.hp2	intron_variant	MODIFIER	c.447-467G>A c.447-467G>A	C9orf43	ENSG00000157653.12	transcript	ENST00000374165.6	protein_coding	5/13		chr9	113422082
chr9:113422163	A A	C C	1	a0001c0001t0001g0084 a0001c0001t0001g0084	1	HG03834.hp2 HG03834.hp2	intron_variant	MODIFIER	c.447-386A>C c.447-386A>C	C9orf43	ENSG00000157653.12	transcript	ENST00000374165.6	protein_coding	5/13		chr9	113422163
chr9:113422515	ATGTTTTG others(3): Show ATGTTTTGTTT	A A	1	a0001c0001t0001g0080 a0001c0001t0001g0080	1	HG02922.hp2 HG02922.hp2	splice_region_variant&intron_variant	LOW	c.447-17_447-8delGTT others(7): Show c.447-17_447-8delGTTTTGTTTT	C9orf43	ENSG00000157653.12	transcript	ENST00000374165.6	protein_coding	5/13	INFO_REALIGN_3_PRIME	chr9	113422515
chr9:113422606	C C	A A	1	a0001c0001t0001g0036 a0001c0001t0001g0036	1	HG03130.hp1 HG03130.hp1	intron_variant	MODIFIER	c.483+21C>A c.483+21C>A	C9orf43	ENSG00000157653.12	transcript	ENST00000374165.6	protein_coding	6/13		chr9	113422606
chr9:113422714	CT CT	C C	3	a0001c0001t0001g0010 a0001c0001t0001g0018 a0011c0010t0001g0010 a0001c0001t0001g0010 a0001c0001t0001g0018 a0011c0010t0001g0010	6	HG01243.hp1 HG02572.hp1 HG03516.hp2 others(3): Show HG01243.hp1 HG02572.hp1 HG03516.hp2 HG06807.hp2 NA18906.hp2 NA20129.hp2	intron_variant	MODIFIER	c.483+131delT c.483+131delT	C9orf43	ENSG00000157653.12	transcript	ENST00000374165.6	protein_coding	6/13	INFO_REALIGN_3_PRIME	chr9	113422714
chr9:113422837	G G	T T	2	a0003c0003t0002g0006 a0009c0011t0002g0006 a0003c0003t0002g0006 a0009c0011t0002g0006	7	HG02132.hp1 HG02148.hp2 HG03490.hp2 others(4): Show HG02132.hp1 HG02148.hp2 HG03490.hp2 HG03688.hp2 NA18955.hp1 NA18983.hp1 NA20805.hp2	intron_variant	MODIFIER	c.483+252G>T c.483+252G>T	C9orf43	ENSG00000157653.12	transcript	ENST00000374165.6	protein_coding	6/13		chr9	113422837
chr9:113423098	G G	A A	1	a0001c0001t0001g0017 a0001c0001t0001g0017	3	HG02109.hp1 HG02723.hp2 HG03225.hp2 HG02109.hp1 HG02723.hp2 HG03225.hp2	intron_variant	MODIFIER	c.484-228G>A c.484-228G>A	C9orf43	ENSG00000157653.12	transcript	ENST00000374165.6	protein_coding	6/13		chr9	113423098
chr9:113423141	A A	G G	2	a0001c0001t0001g0066 a0006c0006t0001g0039 a0001c0001t0001g0066 a0006c0006t0001g0039	2	HG00639.hp2 HG01256.hp1 HG00639.hp2 HG01256.hp1	intron_variant	MODIFIER	c.484-185A>G c.484-185A>G	C9orf43	ENSG00000157653.12	transcript	ENST00000374165.6	protein_coding	6/13		chr9	113423141
chr9:113423202	G G	A A	3	a0001c0001t0001g0065 a0001c0001t0001g0066 a0006c0006t0001g0039 a0001c0001t0001g0065 a0001c0001t0001g0066 a0006c0006t0001g0039	3	HG00639.hp2 HG01256.hp1 NA19030.hp1 HG00639.hp2 HG01256.hp1 NA19030.hp1	intron_variant	MODIFIER	c.484-124G>A c.484-124G>A	C9orf43	ENSG00000157653.12	transcript	ENST00000374165.6	protein_coding	6/13		chr9	113423202
chr9:113423289	A A	G G	3	a0003c0003t0002g0006 a0003c0003t0002g0081 a0009c0011t0002g0006 a0003c0003t0002g0006 a0003c0003t0002g0081 a0009c0011t0002g0006	8	HG02132.hp1 HG02148.hp2 HG03490.hp2 others(5): Show HG02132.hp1 HG02148.hp2 HG03490.hp2 HG03688.hp1 HG03688.hp2 NA18955.hp1 NA18983.hp1 NA20805.hp2	intron_variant	MODIFIER	c.484-37A>G c.484-37A>G	C9orf43	ENSG00000157653.12	transcript	ENST00000374165.6	protein_coding	6/13		chr9	113423289
chr9:113423310	A A	G G	1	a0001c0001t0001g0061 a0001c0001t0001g0061	1	HG02015.hp2 HG02015.hp2	intron_variant	MODIFIER	c.484-16A>G c.484-16A>G	C9orf43	ENSG00000157653.12	transcript	ENST00000374165.6	protein_coding	6/13		chr9	113423310
chr9:113423742	C C	G G	1	a0001c0001t0001g0025 a0001c0001t0001g0025	2	HG02027.hp1 NA18974.hp1 HG02027.hp1 NA18974.hp1	intron_variant	MODIFIER	c.656+244C>G c.656+244C>G	C9orf43	ENSG00000157653.12	transcript	ENST00000374165.6	protein_coding	7/13		chr9	113423742
chr9:113423908	C C	G G	1	a0001c0001t0001g0053 a0001c0001t0001g0053	1	NA18962.hp1 NA18962.hp1	intron_variant	MODIFIER	c.657-258C>G c.657-258C>G	C9orf43	ENSG00000157653.12	transcript	ENST00000374165.6	protein_coding	7/13		chr9	113423908
chr9:113424035	A A	G G	3	a0003c0003t0002g0006 a0003c0003t0002g0081 a0009c0011t0002g0006 a0003c0003t0002g0006 a0003c0003t0002g0081 a0009c0011t0002g0006	8	HG02132.hp1 HG02148.hp2 HG03490.hp2 others(5): Show HG02132.hp1 HG02148.hp2 HG03490.hp2 HG03688.hp1 HG03688.hp2 NA18955.hp1 NA18983.hp1 NA20805.hp2	intron_variant	MODIFIER	c.657-131A>G c.657-131A>G	C9orf43	ENSG00000157653.12	transcript	ENST00000374165.6	protein_coding	7/13		chr9	113424035
chr9:113424087	C C	G G	1	a0001c0001t0001g0041 a0001c0001t0001g0041	1	HG00733.hp2 HG00733.hp2	intron_variant	MODIFIER	c.657-79C>G c.657-79C>G	C9orf43	ENSG00000157653.12	transcript	ENST00000374165.6	protein_coding	7/13		chr9	113424087
chr9:113424111	A A	T T	1	a0001c0001t0001g0052 a0001c0001t0001g0052	1	NA18971.hp1 NA18971.hp1	intron_variant	MODIFIER	c.657-55A>T c.657-55A>T	C9orf43	ENSG00000157653.12	transcript	ENST00000374165.6	protein_coding	7/13		chr9	113424111
chr9:113424520	C C	CT CT	3	a0003c0003t0002g0006 a0003c0003t0002g0081 a0009c0011t0002g0006 a0003c0003t0002g0006 a0003c0003t0002g0081 a0009c0011t0002g0006	8	HG02132.hp1 HG02148.hp2 HG03490.hp2 others(5): Show HG02132.hp1 HG02148.hp2 HG03490.hp2 HG03688.hp1 HG03688.hp2 NA18955.hp1 NA18983.hp1 NA20805.hp2	intron_variant	MODIFIER	c.807+220dupT c.807+220dupT	C9orf43	ENSG00000157653.12	transcript	ENST00000374165.6	protein_coding	8/13	INFO_REALIGN_3_PRIME	chr9	113424520
chr9:113424817	T T	C C	1	a0001c0001t0001g0015 a0001c0001t0001g0015	3	HG01891.hp2 HG02622.hp1 HG03471.hp2 HG01891.hp2 HG02622.hp1 HG03471.hp2	intron_variant	MODIFIER	c.808-202T>C c.808-202T>C	C9orf43	ENSG00000157653.12	transcript	ENST00000374165.6	protein_coding	8/13		chr9	113424817
chr9:113424937	G G	A A	1	a0001c0001t0001g0036 a0001c0001t0001g0036	1	HG03130.hp1 HG03130.hp1	intron_variant	MODIFIER	c.808-82G>A c.808-82G>A	C9orf43	ENSG00000157653.12	transcript	ENST00000374165.6	protein_coding	8/13		chr9	113424937
chr9:113425139	C C	T T	1	a0001c0001t0001g0051 a0001c0001t0001g0051	1	HG02965.hp2 HG02965.hp2	intron_variant	MODIFIER	c.865+63C>T c.865+63C>T	C9orf43	ENSG00000157653.12	transcript	ENST00000374165.6	protein_coding	9/13		chr9	113425139
chr9:113425530	A A	T T	3	a0003c0003t0002g0006 a0003c0003t0002g0081 a0009c0011t0002g0006 a0003c0003t0002g0006 a0003c0003t0002g0081 a0009c0011t0002g0006	8	HG02132.hp1 HG02148.hp2 HG03490.hp2 others(5): Show HG02132.hp1 HG02148.hp2 HG03490.hp2 HG03688.hp1 HG03688.hp2 NA18955.hp1 NA18983.hp1 NA20805.hp2	intron_variant	MODIFIER	c.942+110A>T c.942+110A>T	C9orf43	ENSG00000157653.12	transcript	ENST00000374165.6	protein_coding	10/13		chr9	113425530
chr9:113425822	T T	A A	1	a0001c0001t0001g0077 a0001c0001t0001g0077	1	NA19006.hp1 NA19006.hp1	intron_variant	MODIFIER	c.1030+92T>A c.1030+92T>A	C9orf43	ENSG00000157653.12	transcript	ENST00000374165.6	protein_coding	11/13		chr9	113425822
chr9:113425960	G G	T T	3	a0003c0003t0002g0006 a0003c0003t0002g0081 a0009c0011t0002g0006 a0003c0003t0002g0006 a0003c0003t0002g0081 a0009c0011t0002g0006	8	HG02132.hp1 HG02148.hp2 HG03490.hp2 others(5): Show HG02132.hp1 HG02148.hp2 HG03490.hp2 HG03688.hp1 HG03688.hp2 NA18955.hp1 NA18983.hp1 NA20805.hp2	intron_variant	MODIFIER	c.1030+230G>T c.1030+230G>T	C9orf43	ENSG00000157653.12	transcript	ENST00000374165.6	protein_coding	11/13		chr9	113425960
chr9:113425992	T T	C C	3	a0003c0003t0002g0006 a0003c0003t0002g0081 a0009c0011t0002g0006 a0003c0003t0002g0006 a0003c0003t0002g0081 a0009c0011t0002g0006	8	HG02132.hp1 HG02148.hp2 HG03490.hp2 others(5): Show HG02132.hp1 HG02148.hp2 HG03490.hp2 HG03688.hp1 HG03688.hp2 NA18955.hp1 NA18983.hp1 NA20805.hp2	intron_variant	MODIFIER	c.1030+262T>C c.1030+262T>C	C9orf43	ENSG00000157653.12	transcript	ENST00000374165.6	protein_coding	11/13		chr9	113425992
chr9:113426125	C C	G G	1	a0001c0001t0001g0060 a0001c0001t0001g0060	1	HG00438.hp1 HG00438.hp1	intron_variant	MODIFIER	c.1030+395C>G c.1030+395C>G	C9orf43	ENSG00000157653.12	transcript	ENST00000374165.6	protein_coding	11/13		chr9	113426125
chr9:113426194	T T	C C	3	a0003c0003t0002g0006 a0003c0003t0002g0081 a0009c0011t0002g0006 a0003c0003t0002g0006 a0003c0003t0002g0081 a0009c0011t0002g0006	8	HG02132.hp1 HG02148.hp2 HG03490.hp2 others(5): Show HG02132.hp1 HG02148.hp2 HG03490.hp2 HG03688.hp1 HG03688.hp2 NA18955.hp1 NA18983.hp1 NA20805.hp2	intron_variant	MODIFIER	c.1030+464T>C c.1030+464T>C	C9orf43	ENSG00000157653.12	transcript	ENST00000374165.6	protein_coding	11/13		chr9	113426194
chr9:113426298	A A	G G	17	a0001c0001t0001g0010 a0001c0001t0001g0018 a0001c0001t0001g0021 others(14): Show a0001c0001t0001g0010 a0001c0001t0001g0018 a0001c0001t0001g0021 a0001c0001t0001g0036 a0001c0001t0001g0080 a0001c0001t0001g0085 a0002c0002t0001g0004 a0002c0002t0001g0011 a0002c0002t0001g0012 a0002c0002t0001g0037 a0002c0002t0001g0038 a0004c0004t0001g0013 a0004c0004t0001g0019 a0004c0004t0001g0023 a0007c0008t0001g0004 a0008c0012t0001g0013 a0011c0010t0001g0010	37	HG00140.hp2 HG00735.hp1 HG00738.hp1 others(34): Show HG00140.hp2 HG00735.hp1 HG00738.hp1 HG00741.hp2 HG01099.hp1 HG01106.hp1 HG01167.hp2 HG01168.hp1 HG01192.hp1 HG01243.hp1 HG01261.hp1 HG01261.hp2 HG01516.hp1 HG01517.hp1 HG01884.hp2 HG01978.hp2 HG02145.hp1 HG02280.hp2 HG02572.hp1 HG02818.hp2 HG02895.hp2 HG02896.hp1 HG02922.hp2 HG02970.hp2 HG03017.hp1 HG03041.hp2 HG03098.hp1 HG03130.hp1 HG03139.hp2 HG03516.hp2 HG03540.hp1 HG04228.hp1 HG06807.hp2 NA18522.hp1 NA18906.hp2 NA20129.hp1 NA20129.hp2	intron_variant	MODIFIER	c.1030+568A>G c.1030+568A>G	C9orf43	ENSG00000157653.12	transcript	ENST00000374165.6	protein_coding	11/13		chr9	113426298
chr9:113426445	G G	T T	22	a0001c0001t0001g0010 a0001c0001t0001g0018 a0001c0001t0001g0021 others(19): Show a0001c0001t0001g0010 a0001c0001t0001g0018 a0001c0001t0001g0021 a0001c0001t0001g0036 a0001c0001t0001g0080 a0001c0001t0001g0085 a0001c0001t0005g0031 a0001c0001t0005g0032 a0002c0002t0001g0004 a0002c0002t0001g0011 a0002c0002t0001g0012 a0002c0002t0001g0037 a0002c0002t0001g0038 a0003c0003t0002g0006 a0003c0003t0002g0081 a0004c0004t0001g0013 a0004c0004t0001g0019 a0004c0004t0001g0023 a0007c0008t0001g0004 a0008c0012t0001g0013 a0009c0011t0002g0006 a0011c0010t0001g0010	47	HG00140.hp2 HG00735.hp1 HG00738.hp1 others(44): Show HG00140.hp2 HG00735.hp1 HG00738.hp1 HG00741.hp2 HG01099.hp1 HG01106.hp1 HG01167.hp2 HG01168.hp1 HG01192.hp1 HG01243.hp1 HG01261.hp1 HG01261.hp2 HG01516.hp1 HG01517.hp1 HG01884.hp2 HG01978.hp2 HG02055.hp1 HG02132.hp1 HG02145.hp1 HG02148.hp2 HG02280.hp2 HG02572.hp1 HG02698.hp1 HG02818.hp2 HG02895.hp2 HG02896.hp1 HG02922.hp2 HG02970.hp2 HG03017.hp1 HG03041.hp2 HG03098.hp1 HG03130.hp1 HG03139.hp2 HG03490.hp2 HG03516.hp2 HG03540.hp1 HG03688.hp1 HG03688.hp2 HG04228.hp1 HG06807.hp2 NA18522.hp1 NA18906.hp2 NA18955.hp1 NA18983.hp1 NA20129.hp1 NA20129.hp2 NA20805.hp2	intron_variant	MODIFIER	c.1030+715G>T c.1030+715G>T	C9orf43	ENSG00000157653.12	transcript	ENST00000374165.6	protein_coding	11/13		chr9	113426445
chr9:113426749	G G	A A	3	a0003c0003t0002g0006 a0003c0003t0002g0081 a0009c0011t0002g0006 a0003c0003t0002g0006 a0003c0003t0002g0081 a0009c0011t0002g0006	8	HG02132.hp1 HG02148.hp2 HG03490.hp2 others(5): Show HG02132.hp1 HG02148.hp2 HG03490.hp2 HG03688.hp1 HG03688.hp2 NA18955.hp1 NA18983.hp1 NA20805.hp2	intron_variant	MODIFIER	c.1030+1019G>A c.1030+1019G>A	C9orf43	ENSG00000157653.12	transcript	ENST00000374165.6	protein_coding	11/13		chr9	113426749
chr9:113426759	C C	T T	1	a0001c0001t0001g0050 a0001c0001t0001g0050	1	NA20805.hp1 NA20805.hp1	intron_variant	MODIFIER	c.1030+1029C>T c.1030+1029C>T	C9orf43	ENSG00000157653.12	transcript	ENST00000374165.6	protein_coding	11/13		chr9	113426759
chr9:113427129	G G	A A	3	a0003c0003t0002g0006 a0003c0003t0002g0081 a0009c0011t0002g0006 a0003c0003t0002g0006 a0003c0003t0002g0081 a0009c0011t0002g0006	8	HG02132.hp1 HG02148.hp2 HG03490.hp2 others(5): Show HG02132.hp1 HG02148.hp2 HG03490.hp2 HG03688.hp1 HG03688.hp2 NA18955.hp1 NA18983.hp1 NA20805.hp2	intron_variant	MODIFIER	c.1031-1018G>A c.1031-1018G>A	C9orf43	ENSG00000157653.12	transcript	ENST00000374165.6	protein_coding	11/13		chr9	113427129
chr9:113427149	T T	C C	1	a0001c0001t0001g0058 a0001c0001t0001g0058	1	HG03579.hp1 HG03579.hp1	intron_variant	MODIFIER	c.1031-998T>C c.1031-998T>C	C9orf43	ENSG00000157653.12	transcript	ENST00000374165.6	protein_coding	11/13		chr9	113427149
chr9:113427172	T T	C C	2	a0001c0001t0001g0080 a0001c0001t0001g0085 a0001c0001t0001g0080 a0001c0001t0001g0085	2	HG02922.hp2 NA20129.hp1 HG02922.hp2 NA20129.hp1	intron_variant	MODIFIER	c.1031-975T>C c.1031-975T>C	C9orf43	ENSG00000157653.12	transcript	ENST00000374165.6	protein_coding	11/13		chr9	113427172
chr9:113427477	A A	C C	1	a0001c0001t0001g0026 a0001c0001t0001g0026	2	HG00280.hp2 HG01258.hp1 HG00280.hp2 HG01258.hp1	intron_variant	MODIFIER	c.1031-670A>C c.1031-670A>C	C9orf43	ENSG00000157653.12	transcript	ENST00000374165.6	protein_coding	11/13		chr9	113427477
chr9:113427513	C C	T T	5	a0001c0001t0001g0036 a0004c0004t0001g0013 a0004c0004t0001g0019 others(2): Show a0001c0001t0001g0036 a0004c0004t0001g0013 a0004c0004t0001g0019 a0004c0004t0001g0023 a0008c0012t0001g0013	8	HG02280.hp2 HG02818.hp2 HG02970.hp2 others(5): Show HG02280.hp2 HG02818.hp2 HG02970.hp2 HG03041.hp2 HG03098.hp1 HG03130.hp1 HG03139.hp2 NA18522.hp1	intron_variant	MODIFIER	c.1031-634C>T c.1031-634C>T	C9orf43	ENSG00000157653.12	transcript	ENST00000374165.6	protein_coding	11/13		chr9	113427513
chr9:113427551	G G	A A	1	a0002c0002t0001g0037 a0002c0002t0001g0037	1	HG01261.hp1 HG01261.hp1	intron_variant	MODIFIER	c.1031-596G>A c.1031-596G>A	C9orf43	ENSG00000157653.12	transcript	ENST00000374165.6	protein_coding	11/13		chr9	113427551
chr9:113427668	C C	G G	9	a0001c0001t0001g0021 a0001c0001t0001g0080 a0001c0001t0001g0085 others(6): Show a0001c0001t0001g0021 a0001c0001t0001g0080 a0001c0001t0001g0085 a0002c0002t0001g0004 a0002c0002t0001g0011 a0002c0002t0001g0012 a0002c0002t0001g0037 a0002c0002t0001g0038 a0007c0008t0001g0004	23	HG00140.hp2 HG00735.hp1 HG00738.hp1 others(20): Show HG00140.hp2 HG00735.hp1 HG00738.hp1 HG00741.hp2 HG01099.hp1 HG01106.hp1 HG01167.hp2 HG01168.hp1 HG01192.hp1 HG01261.hp1 HG01261.hp2 HG01516.hp1 HG01517.hp1 HG01884.hp2 HG01978.hp2 HG02145.hp1 HG02895.hp2 HG02896.hp1 HG02922.hp2 HG03017.hp1 HG03540.hp1 HG04228.hp1 NA20129.hp1	intron_variant	MODIFIER	c.1031-479C>G c.1031-479C>G	C9orf43	ENSG00000157653.12	transcript	ENST00000374165.6	protein_coding	11/13		chr9	113427668
chr9:113427766	C C	G G	1	a0001c0001t0001g0049 a0001c0001t0001g0049	1	HG01358.hp1 HG01358.hp1	intron_variant	MODIFIER	c.1031-381C>G c.1031-381C>G	C9orf43	ENSG00000157653.12	transcript	ENST00000374165.6	protein_coding	11/13		chr9	113427766
chr9:113427828	C C	T T	1	a0001c0001t0001g0049 a0001c0001t0001g0049	1	HG01358.hp1 HG01358.hp1	intron_variant	MODIFIER	c.1031-319C>T c.1031-319C>T	C9orf43	ENSG00000157653.12	transcript	ENST00000374165.6	protein_coding	11/13		chr9	113427828
chr9:113427906	T T	A A	1	a0001c0001t0001g0059 a0001c0001t0001g0059	1	HG00733.hp1 HG00733.hp1	intron_variant	MODIFIER	c.1031-241T>A c.1031-241T>A	C9orf43	ENSG00000157653.12	transcript	ENST00000374165.6	protein_coding	11/13		chr9	113427906
chr9:113427919	A A	G G	3	a0001c0001t0001g0005 a0001c0001t0001g0067 a0001c0001t0001g0071 a0001c0001t0001g0005 a0001c0001t0001g0067 a0001c0001t0001g0071	10	NA18946.hp2 NA18965.hp1 NA18979.hp1 others(7): Show NA18946.hp2 NA18965.hp1 NA18979.hp1 NA18980.hp1 NA18984.hp2 NA18998.hp2 NA19011.hp1 NA19012.hp2 NA19064.hp1 NA19091.hp2	intron_variant	MODIFIER	c.1031-228A>G c.1031-228A>G	C9orf43	ENSG00000157653.12	transcript	ENST00000374165.6	protein_coding	11/13		chr9	113427919
chr9:113428251	G G	T T	2	a0001c0001t0005g0031 a0001c0001t0005g0032 a0001c0001t0005g0031 a0001c0001t0005g0032	2	HG02055.hp1 HG02698.hp1 HG02055.hp1 HG02698.hp1	intron_variant	MODIFIER	c.1107+28G>T c.1107+28G>T	C9orf43	ENSG00000157653.12	transcript	ENST00000374165.6	protein_coding	12/13		chr9	113428251
chr9:113428342	C C	T T	1	a0001c0001t0004g0024 a0001c0001t0004g0024	2	HG02615.hp2 HG03540.hp2 HG02615.hp2 HG03540.hp2	intron_variant	MODIFIER	c.1107+119C>T c.1107+119C>T	C9orf43	ENSG00000157653.12	transcript	ENST00000374165.6	protein_coding	12/13		chr9	113428342
chr9:113428424	C C	T T	1	a0002c0002t0001g0038 a0002c0002t0001g0038	1	HG00738.hp1 HG00738.hp1	intron_variant	MODIFIER	c.1107+201C>T c.1107+201C>T	C9orf43	ENSG00000157653.12	transcript	ENST00000374165.6	protein_coding	12/13		chr9	113428424
chr9:113428467	CTCATGAA others(7): Show CTCATGAAAGCAGTT	C C	3	a0001c0001t0001g0010 a0001c0001t0001g0018 a0011c0010t0001g0010 a0001c0001t0001g0010 a0001c0001t0001g0018 a0011c0010t0001g0010	6	HG01243.hp1 HG02572.hp1 HG03516.hp2 others(3): Show HG01243.hp1 HG02572.hp1 HG03516.hp2 HG06807.hp2 NA18906.hp2 NA20129.hp2	intron_variant	MODIFIER	c.1107+261_1107+274d others(16): Show c.1107+261_1107+274delATGAAAGCAGTTTC	C9orf43	ENSG00000157653.12	transcript	ENST00000374165.6	protein_coding	12/13	INFO_REALIGN_3_PRIME	chr9	113428467
chr9:113428561	C C	T T	8	a0001c0001t0001g0021 a0001c0001t0001g0080 a0001c0001t0001g0085 others(5): Show a0001c0001t0001g0021 a0001c0001t0001g0080 a0001c0001t0001g0085 a0002c0002t0001g0004 a0002c0002t0001g0012 a0002c0002t0001g0037 a0002c0002t0001g0038 a0007c0008t0001g0004	20	HG00140.hp2 HG00738.hp1 HG00741.hp2 others(17): Show HG00140.hp2 HG00738.hp1 HG00741.hp2 HG01099.hp1 HG01106.hp1 HG01167.hp2 HG01168.hp1 HG01261.hp1 HG01261.hp2 HG01516.hp1 HG01517.hp1 HG01884.hp2 HG01978.hp2 HG02145.hp1 HG02896.hp1 HG02922.hp2 HG03017.hp1 HG03540.hp1 HG04228.hp1 NA20129.hp1	intron_variant	MODIFIER	c.1107+338C>T c.1107+338C>T	C9orf43	ENSG00000157653.12	transcript	ENST00000374165.6	protein_coding	12/13		chr9	113428561
chr9:113428667	T T	C C	1	a0002c0002t0001g0037 a0002c0002t0001g0037	1	HG01261.hp1 HG01261.hp1	intron_variant	MODIFIER	c.1108-233T>C c.1108-233T>C	C9orf43	ENSG00000157653.12	transcript	ENST00000374165.6	protein_coding	12/13		chr9	113428667
chr9:113428757	G G	A A	3	a0003c0003t0002g0006 a0003c0003t0002g0081 a0009c0011t0002g0006 a0003c0003t0002g0006 a0003c0003t0002g0081 a0009c0011t0002g0006	8	HG02132.hp1 HG02148.hp2 HG03490.hp2 others(5): Show HG02132.hp1 HG02148.hp2 HG03490.hp2 HG03688.hp1 HG03688.hp2 NA18955.hp1 NA18983.hp1 NA20805.hp2	intron_variant	MODIFIER	c.1108-143G>A c.1108-143G>A	C9orf43	ENSG00000157653.12	transcript	ENST00000374165.6	protein_coding	12/13		chr9	113428757
chr9:113428889	A A	G G	7	a0001c0001t0001g0048 a0001c0001t0001g0080 a0001c0001t0001g0085 others(4): Show a0001c0001t0001g0048 a0001c0001t0001g0080 a0001c0001t0001g0085 a0002c0002t0001g0004 a0002c0002t0001g0037 a0002c0002t0001g0038 a0007c0008t0001g0004	16	HG00140.hp2 HG00738.hp1 HG00741.hp2 others(13): Show HG00140.hp2 HG00738.hp1 HG00741.hp2 HG01099.hp1 HG01106.hp1 HG01167.hp2 HG01168.hp1 HG01261.hp1 HG01516.hp1 HG01517.hp1 HG02896.hp1 HG02922.hp2 HG03017.hp1 HG03579.hp2 HG04228.hp1 NA20129.hp1	intron_variant	MODIFIER	c.1108-11A>G c.1108-11A>G	C9orf43	ENSG00000157653.12	transcript	ENST00000374165.6	protein_coding	12/13		chr9	113428889
chr9:113428964	G G	A A	4	a0001c0001t0001g0003 a0001c0001t0001g0016 a0001c0001t0001g0084 others(1): Show a0001c0001t0001g0003 a0001c0001t0001g0016 a0001c0001t0001g0084 a0012c0007t0008g0003	22	HG00099.hp1 HG00323.hp2 HG00423.hp1 others(19): Show HG00099.hp1 HG00323.hp2 HG00423.hp1 HG00738.hp2 HG01070.hp2 HG01168.hp2 HG01169.hp2 HG01515.hp2 HG01517.hp2 HG02040.hp1 HG02056.hp1 HG02074.hp2 HG03831.hp1 HG03834.hp2 HG03942.hp2 HG04199.hp2 NA18747.hp1 NA18954.hp2 NA19004.hp1 NA19058.hp1 NA19062.hp1 homoSapiens_chm13v2.hp1	splice_donor_variant&intron_variant	HIGH	c.1171+1G>A c.1171+1G>A	C9orf43	ENSG00000157653.12	transcript	ENST00000374165.6	protein_coding	13/13		chr9	113428964

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🧬 JoGo Online Haplotype Explorer C9orf43_chr9_113405747_113434690

JoGo Local Haplotype Explorer (on iGV) C9orf43_chr9_113405747_113434690

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🧬 Gene Summary

AAmino acid(protein) Level Haplotype Info (Total: 13)

CCoding Level Haplotype Info (Total: 14)

TTranscript Level Haplotype Info (Total: 8)

GGenebody Level Haplotype Info (Total: 85)

A C AC Level (Amino Acid + Coding) Haplotype Info (Total: 14)

A C T ACT Level (Amino Acid + Coding + Transcript) Haplotype Info (Total: 19)

A C T G ACTG Level (Amino Acid + Coding + Transcript + Genebody) Haplotype Info (Total: 97)

Haplotype Details by Sample (Haploid Level) (Total: 310)

AAmino acid(protein) Level Haplotype Related Variants (Effect to Protein Coding Variants) (Total: 14)

CCoding Level Variants (Synonymous Mutations) (Total: 1)

TTranscript Level Haplotype Variants (5'UTR+3'UTR) (Total: 9)

GGenebody Level Haplotype Variants (Intron) (Total: 138)

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Annotation (Repeats)

Annotation (SNP Array)