Joint Open Genome and Omics Platform (JoGo)

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geneid	134549
ensemblid	ENSG00000164403.15
hgncid	24084
symbol	SHROOM1
name	shroom family member 1
refseq_nuc	NM_001172700.2
refseq_prot	NP_001166171.1
ensembl_nuc	ENST00000378679.8
ensembl_prot	ENSP00000367950.3
mane_status	MANE Select
chr	chr5
start	132822141
end	132830647
strand	-
ver	v1.2
region	chr5:132822141-132830647
region5000	chr5:132817141-132835647
regionname0	SHROOM1_chr5_132822141_132830647
regionname5000	SHROOM1_chr5_132817141_132835647

ahapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	alen	total	AFR	AMR	EAS	EUR	SAS	JPT	regionname	genename	aa	chr	start	end
a0001	1/1	852	319	81	55	153	7	21	110	SHROOM1_chr5_132817141_132835647	SHROOM1	copy fasta	chr5	132817141	132835647
a0002	0/0	852	54	5	7	30	4	8	24	SHROOM1_chr5_132817141_132835647	SHROOM1	copy fasta	chr5	132817141	132835647
a0003	0/0	852	5	5	0	0	0	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	copy fasta	chr5	132817141	132835647
a0004	0/0	852	4	0	0	4	0	0	4	SHROOM1_chr5_132817141_132835647	SHROOM1	copy fasta	chr5	132817141	132835647
a0005	0/0	852	3	0	1	1	0	1	1	SHROOM1_chr5_132817141_132835647	SHROOM1	copy fasta	chr5	132817141	132835647
a0006	0/0	852	2	1	0	0	1	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	copy fasta	chr5	132817141	132835647
a0007	0/0	852	2	2	0	0	0	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	copy fasta	chr5	132817141	132835647
a0008	0/0	852	1	0	0	0	0	1	0	SHROOM1_chr5_132817141_132835647	SHROOM1	copy fasta	chr5	132817141	132835647
a0009	0/0	852	1	0	0	1	0	0	1	SHROOM1_chr5_132817141_132835647	SHROOM1	copy fasta	chr5	132817141	132835647
a0010	0/0	852	1	0	1	0	0	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	copy fasta	chr5	132817141	132835647
a0011	0/0	852	1	0	0	1	0	0	1	SHROOM1_chr5_132817141_132835647	SHROOM1	copy fasta	chr5	132817141	132835647
a0012	0/0	852	1	0	0	1	0	0	1	SHROOM1_chr5_132817141_132835647	SHROOM1	copy fasta	chr5	132817141	132835647
a0013	0/0	852	1	0	0	1	0	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	copy fasta	chr5	132817141	132835647
a0014	0/0	852	1	0	0	0	0	1	0	SHROOM1_chr5_132817141_132835647	SHROOM1	copy fasta	chr5	132817141	132835647

chapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	clen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	cseq	chr	start	end
c0001	1/1	2559	267	54	48	135	7	21	SHROOM1_chr5_132817141_132835647	SHROOM1	copy fasta	chr5	132817141	132835647
c0002	0/0	2559	53	5	7	29	4	8	SHROOM1_chr5_132817141_132835647	SHROOM1	copy fasta	chr5	132817141	132835647
c0003	0/0	2559	41	20	4	17	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	copy fasta	chr5	132817141	132835647
c0004	0/0	2559	10	7	3	0	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	copy fasta	chr5	132817141	132835647
c0005	0/0	2559	5	5	0	0	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	copy fasta	chr5	132817141	132835647
c0006	0/0	2559	4	0	0	4	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	copy fasta	chr5	132817141	132835647
c0007	0/0	2559	3	0	1	1	0	1	SHROOM1_chr5_132817141_132835647	SHROOM1	copy fasta	chr5	132817141	132835647
c0008	0/0	2559	2	1	0	0	1	0	SHROOM1_chr5_132817141_132835647	SHROOM1	copy fasta	chr5	132817141	132835647
c0009	0/0	2559	2	2	0	0	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	copy fasta	chr5	132817141	132835647
c0010	0/0	2559	1	0	0	0	0	1	SHROOM1_chr5_132817141_132835647	SHROOM1	copy fasta	chr5	132817141	132835647
c0011	0/0	2559	1	0	0	1	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	copy fasta	chr5	132817141	132835647
c0012	0/0	2559	1	0	1	0	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	copy fasta	chr5	132817141	132835647
c0013	0/0	2559	1	0	0	1	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	copy fasta	chr5	132817141	132835647
c0014	0/0	2559	1	0	0	1	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	copy fasta	chr5	132817141	132835647
c0015	0/0	2559	1	0	0	1	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	copy fasta	chr5	132817141	132835647
c0016	0/0	2559	1	0	0	0	0	1	SHROOM1_chr5_132817141_132835647	SHROOM1	copy fasta	chr5	132817141	132835647
c0017	0/0	2559	1	0	0	1	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	copy fasta	chr5	132817141	132835647
c0018	0/0	2559	1	0	0	1	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	copy fasta	chr5	132817141	132835647

thapid	grch38 chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	tlen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	tseq	chr	start	end
t0001	1/0	1210	111	32	14	60	1	3	SHROOM1_chr5_132817141_132835647	SHROOM1	copy fasta	chr5	132817141	132835647
t0002	0/1	1211	110	19	12	60	2	16	SHROOM1_chr5_132817141_132835647	SHROOM1	copy fasta	chr5	132817141	132835647
t0003	0/0	1212	36	9	5	18	1	3	SHROOM1_chr5_132817141_132835647	SHROOM1	copy fasta	chr5	132817141	132835647
t0004	0/0	1209	21	10	7	2	2	0	SHROOM1_chr5_132817141_132835647	SHROOM1	copy fasta	chr5	132817141	132835647
t0005	0/0	1213	17	6	3	6	1	1	SHROOM1_chr5_132817141_132835647	SHROOM1	copy fasta	chr5	132817141	132835647
t0006	0/0	1216	14	0	4	7	1	2	SHROOM1_chr5_132817141_132835647	SHROOM1	copy fasta	chr5	132817141	132835647
t0007	0/0	1217	13	1	1	9	0	2	SHROOM1_chr5_132817141_132835647	SHROOM1	copy fasta	chr5	132817141	132835647
t0008	0/0	1208	10	6	4	0	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	copy fasta	chr5	132817141	132835647
t0009	0/0	1210	8	0	3	5	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	copy fasta	chr5	132817141	132835647
t0010	0/0	1219	7	2	1	2	2	0	SHROOM1_chr5_132817141_132835647	SHROOM1	copy fasta	chr5	132817141	132835647
t0011	0/0	1218	6	2	1	1	1	1	SHROOM1_chr5_132817141_132835647	SHROOM1	copy fasta	chr5	132817141	132835647
t0012	0/0	1215	6	1	0	3	0	2	SHROOM1_chr5_132817141_132835647	SHROOM1	copy fasta	chr5	132817141	132835647
t0013	0/0	1214	6	3	1	2	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	copy fasta	chr5	132817141	132835647
t0014	0/0	1210	5	0	0	5	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	copy fasta	chr5	132817141	132835647
t0015	0/0	1220	4	0	0	4	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	copy fasta	chr5	132817141	132835647
t0016	0/0	1211	3	0	3	0	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	copy fasta	chr5	132817141	132835647
t0017	0/0	1221	2	0	0	2	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	copy fasta	chr5	132817141	132835647
t0018	0/0	1211	2	0	2	0	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	copy fasta	chr5	132817141	132835647
t0019	0/0	1209	2	0	2	0	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	copy fasta	chr5	132817141	132835647
t0020	0/0	1211	1	0	0	1	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	copy fasta	chr5	132817141	132835647
t0021	0/0	1210	1	0	0	1	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	copy fasta	chr5	132817141	132835647
t0022	0/0	1211	1	0	0	1	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	copy fasta	chr5	132817141	132835647
t0023	0/0	1210	1	0	0	1	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	copy fasta	chr5	132817141	132835647
t0024	0/0	1211	1	0	0	0	0	1	SHROOM1_chr5_132817141_132835647	SHROOM1	copy fasta	chr5	132817141	132835647
t0025	0/0	1210	1	1	0	0	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	copy fasta	chr5	132817141	132835647
t0026	0/0	1217	1	0	0	0	0	1	SHROOM1_chr5_132817141_132835647	SHROOM1	copy fasta	chr5	132817141	132835647
t0027	0/0	1208	1	0	1	0	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	copy fasta	chr5	132817141	132835647
t0028	0/0	1210	1	0	0	1	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	copy fasta	chr5	132817141	132835647
t0029	0/0	1211	1	1	0	0	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	copy fasta	chr5	132817141	132835647
t0030	0/0	1210	1	0	0	1	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	copy fasta	chr5	132817141	132835647
t0031	0/0	1211	1	1	0	0	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	copy fasta	chr5	132817141	132835647
t0032	0/0	1211	1	0	0	0	1	0	SHROOM1_chr5_132817141_132835647	SHROOM1	copy fasta	chr5	132817141	132835647

ghapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	chr	start	end
g0001	1/0	56	8	5	38	1	3	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
g0002	0/1	50	4	6	29	1	9	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
g0003	0/0	32	3	5	19	0	5	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
g0004	0/0	18	1	4	10	1	2	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
g0005	0/0	13	1	0	12	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
g0006	0/0	9	3	1	3	1	1	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
g0007	0/0	9	3	3	3	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
g0008	0/0	8	0	3	5	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
g0009	0/0	7	0	4	0	1	2	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
g0010	0/0	7	2	0	5	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
g0011	0/0	6	5	0	1	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
g0012	0/0	6	4	2	0	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
g0013	0/0	5	0	0	5	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
g0014	0/0	5	0	0	5	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
g0015	0/0	5	5	0	0	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
g0016	0/0	4	0	0	4	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
g0017	0/0	4	4	0	0	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
g0018	0/0	4	0	1	2	1	0	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
g0019	0/0	4	3	1	0	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
g0020	0/0	3	2	1	0	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
g0021	0/0	3	1	0	1	0	1	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
g0022	0/0	3	0	3	0	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
g0023	0/0	3	0	3	0	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
g0024	0/0	3	0	3	0	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
g0025	0/0	3	0	1	1	0	1	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
g0026	0/0	3	3	0	0	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
g0027	0/0	3	3	0	0	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
g0028	0/0	3	2	1	0	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
g0029	0/0	2	0	0	2	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
g0030	0/0	2	0	0	2	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
g0031	0/0	2	2	0	0	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
g0032	0/0	2	2	0	0	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
g0033	0/0	2	0	0	2	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
g0034	0/0	2	0	0	2	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
g0035	0/0	2	0	0	0	2	0	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
g0036	0/0	2	0	1	0	1	0	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
g0037	0/0	2	0	1	1	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
g0038	0/0	2	0	0	0	0	2	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
g0039	0/0	2	2	0	0	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
g0040	0/0	2	0	2	0	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
g0041	0/0	2	0	2	0	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
g0042	0/0	2	0	0	2	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
g0043	0/0	2	2	0	0	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
g0044	0/0	2	0	0	2	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
g0045	0/0	2	0	0	2	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
g0046	0/0	2	0	1	0	1	0	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
g0047	0/0	2	2	0	0	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
g0048	0/0	2	2	0	0	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
g0049	0/0	2	0	0	2	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
g0050	0/0	2	1	1	0	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
g0051	0/0	2	2	0	0	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
g0052	0/0	2	1	1	0	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
g0053	0/0	1	0	0	1	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
g0054	0/0	1	0	0	1	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
g0055	0/0	1	0	0	1	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
g0056	0/0	1	0	0	1	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
g0057	0/0	1	1	0	0	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
g0058	0/0	1	1	0	0	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
g0059	0/0	1	1	0	0	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
g0060	0/0	1	0	0	1	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
g0061	0/0	1	1	0	0	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
g0062	0/0	1	1	0	0	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
g0063	0/0	1	1	0	0	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
g0064	0/0	1	0	1	0	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
g0065	0/0	1	1	0	0	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
g0066	0/0	1	1	0	0	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
g0067	0/0	1	0	0	1	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
g0068	0/0	1	0	0	1	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
g0069	0/0	1	0	0	1	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
g0070	0/0	1	0	0	1	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
g0071	0/0	1	0	0	1	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
g0072	0/0	1	0	1	0	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
g0073	0/0	1	1	0	0	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
g0074	0/0	1	0	0	0	0	1	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
g0075	0/0	1	0	0	1	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
g0076	0/0	1	0	0	0	0	1	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
g0077	0/0	1	0	0	1	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
g0078	0/0	1	0	0	0	0	1	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
g0079	0/0	1	0	0	1	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
g0080	0/0	1	0	0	0	0	1	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
g0081	0/0	1	0	0	0	1	0	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
g0082	0/0	1	1	0	0	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
g0083	0/0	1	1	0	0	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
g0084	0/0	1	1	0	0	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
g0085	0/0	1	0	0	1	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
g0086	0/0	1	0	0	1	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
g0087	0/0	1	1	0	0	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
g0088	0/0	1	0	1	0	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
g0089	0/0	1	0	0	1	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
g0090	0/0	1	1	0	0	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
g0091	0/0	1	0	0	1	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
g0092	0/0	1	0	0	1	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
g0093	0/0	1	0	0	1	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
g0094	0/0	1	0	0	1	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
g0095	0/0	1	0	0	1	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
g0096	0/0	1	0	0	1	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
g0097	0/0	1	0	0	1	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
g0098	0/0	1	1	0	0	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
g0099	0/0	1	0	0	1	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
g0100	0/0	1	0	0	1	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
g0101	0/0	1	0	0	1	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
g0102	0/0	1	1	0	0	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
g0103	0/0	1	0	0	1	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
g0104	0/0	1	0	0	0	0	1	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
g0105	0/0	1	0	1	0	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
g0106	0/0	1	0	1	0	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
g0107	0/0	1	0	0	0	0	1	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
g0108	0/0	1	0	0	0	1	0	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
g0109	0/0	1	0	0	1	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
g0110	0/0	1	0	0	1	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
g0111	0/0	1	1	0	0	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
g0112	0/0	1	0	1	0	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
g0113	0/0	1	0	1	0	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
g0114	0/0	1	0	1	0	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
g0115	0/0	1	1	0	0	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
g0116	0/0	1	0	0	1	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
g0117	0/0	1	0	0	1	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
g0118	0/0	1	0	0	1	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
g0119	0/0	1	1	0	0	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
g0120	0/0	1	1	0	0	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
g0121	0/0	1	1	0	0	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647

achapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	clen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	cseq	chr	start	end
a0001c0001	1/1	2559	267	54	48	135	7	21	SHROOM1_chr5_132817141_132835647	SHROOM1	copy fasta	chr5	132817141	132835647
a0001c0003	0/0	2559	41	20	4	17	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	copy fasta	chr5	132817141	132835647
a0001c0004	0/0	2559	10	7	3	0	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	copy fasta	chr5	132817141	132835647
a0001c0017	0/0	2559	1	0	0	1	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	copy fasta	chr5	132817141	132835647
a0002c0002	0/0	2559	53	5	7	29	4	8	SHROOM1_chr5_132817141_132835647	SHROOM1	copy fasta	chr5	132817141	132835647
a0002c0018	0/0	2559	1	0	0	1	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	copy fasta	chr5	132817141	132835647
a0003c0005	0/0	2559	5	5	0	0	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	copy fasta	chr5	132817141	132835647
a0004c0006	0/0	2559	4	0	0	4	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	copy fasta	chr5	132817141	132835647
a0005c0007	0/0	2559	3	0	1	1	0	1	SHROOM1_chr5_132817141_132835647	SHROOM1	copy fasta	chr5	132817141	132835647
a0006c0008	0/0	2559	2	1	0	0	1	0	SHROOM1_chr5_132817141_132835647	SHROOM1	copy fasta	chr5	132817141	132835647
a0007c0009	0/0	2559	2	2	0	0	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	copy fasta	chr5	132817141	132835647
a0008c0010	0/0	2559	1	0	0	0	0	1	SHROOM1_chr5_132817141_132835647	SHROOM1	copy fasta	chr5	132817141	132835647
a0009c0011	0/0	2559	1	0	0	1	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	copy fasta	chr5	132817141	132835647
a0010c0012	0/0	2559	1	0	1	0	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	copy fasta	chr5	132817141	132835647
a0011c0014	0/0	2559	1	0	0	1	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	copy fasta	chr5	132817141	132835647
a0012c0015	0/0	2559	1	0	0	1	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	copy fasta	chr5	132817141	132835647
a0013c0013	0/0	2559	1	0	0	1	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	copy fasta	chr5	132817141	132835647
a0014c0016	0/0	2559	1	0	0	0	0	1	SHROOM1_chr5_132817141_132835647	SHROOM1	copy fasta	chr5	132817141	132835647

acthapid	grch38 chm13v2	tlen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	tseq	chr	start	end
a0001c0001t0001	1/0	3768	78	19	10	44	1	3	SHROOM1_chr5_132817141_132835647	SHROOM1	copy fasta	chr5	132817141	132835647
a0001c0001t0002	0/1	3769	96	16	11	53	1	14	SHROOM1_chr5_132817141_132835647	SHROOM1	copy fasta	chr5	132817141	132835647
a0001c0001t0003	0/0	3770	30	7	5	14	1	3	SHROOM1_chr5_132817141_132835647	SHROOM1	copy fasta	chr5	132817141	132835647
a0001c0001t0004	0/0	3767	9	0	5	2	2	0	SHROOM1_chr5_132817141_132835647	SHROOM1	copy fasta	chr5	132817141	132835647
a0001c0001t0005	0/0	3771	17	6	3	6	1	1	SHROOM1_chr5_132817141_132835647	SHROOM1	copy fasta	chr5	132817141	132835647
a0001c0001t0008	0/0	3766	3	0	3	0	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	copy fasta	chr5	132817141	132835647
a0001c0001t0009	0/0	3768	8	0	3	5	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	copy fasta	chr5	132817141	132835647
a0001c0001t0012	0/0	3773	1	1	0	0	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	copy fasta	chr5	132817141	132835647
a0001c0001t0013	0/0	3772	6	3	1	2	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	copy fasta	chr5	132817141	132835647
a0001c0001t0014	0/0	3768	5	0	0	5	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	copy fasta	chr5	132817141	132835647
a0001c0001t0016	0/0	3769	3	0	3	0	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	copy fasta	chr5	132817141	132835647
a0001c0001t0018	0/0	3769	2	0	2	0	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	copy fasta	chr5	132817141	132835647
a0001c0001t0019	0/0	3767	2	0	2	0	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	copy fasta	chr5	132817141	132835647
a0001c0001t0021	0/0	3768	1	0	0	1	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	copy fasta	chr5	132817141	132835647
a0001c0001t0022	0/0	3769	1	0	0	1	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	copy fasta	chr5	132817141	132835647
a0001c0001t0023	0/0	3768	1	0	0	1	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	copy fasta	chr5	132817141	132835647
a0001c0001t0025	0/0	3768	1	1	0	0	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	copy fasta	chr5	132817141	132835647
a0001c0001t0028	0/0	3768	1	0	0	1	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	copy fasta	chr5	132817141	132835647
a0001c0001t0031	0/0	3769	1	1	0	0	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	copy fasta	chr5	132817141	132835647
a0001c0001t0032	0/0	3769	1	0	0	0	1	0	SHROOM1_chr5_132817141_132835647	SHROOM1	copy fasta	chr5	132817141	132835647
a0001c0003t0001	0/0	3768	26	12	2	12	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	copy fasta	chr5	132817141	132835647
a0001c0003t0002	0/0	3769	7	3	0	4	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	copy fasta	chr5	132817141	132835647
a0001c0003t0003	0/0	3770	2	2	0	0	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	copy fasta	chr5	132817141	132835647
a0001c0003t0004	0/0	3767	5	3	2	0	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	copy fasta	chr5	132817141	132835647
a0001c0003t0020	0/0	3769	1	0	0	1	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	copy fasta	chr5	132817141	132835647
a0001c0004t0001	0/0	3768	1	0	1	0	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	copy fasta	chr5	132817141	132835647
a0001c0004t0004	0/0	3767	1	1	0	0	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	copy fasta	chr5	132817141	132835647
a0001c0004t0008	0/0	3766	7	6	1	0	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	copy fasta	chr5	132817141	132835647
a0001c0004t0027	0/0	3766	1	0	1	0	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	copy fasta	chr5	132817141	132835647
a0001c0017t0001	0/0	3768	1	0	0	1	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	copy fasta	chr5	132817141	132835647
a0002c0002t0006	0/0	3774	14	0	4	7	1	2	SHROOM1_chr5_132817141_132835647	SHROOM1	copy fasta	chr5	132817141	132835647
a0002c0002t0007	0/0	3775	13	1	1	9	0	2	SHROOM1_chr5_132817141_132835647	SHROOM1	copy fasta	chr5	132817141	132835647
a0002c0002t0010	0/0	3777	7	2	1	2	2	0	SHROOM1_chr5_132817141_132835647	SHROOM1	copy fasta	chr5	132817141	132835647
a0002c0002t0011	0/0	3776	6	2	1	1	1	1	SHROOM1_chr5_132817141_132835647	SHROOM1	copy fasta	chr5	132817141	132835647
a0002c0002t0012	0/0	3773	5	0	0	3	0	2	SHROOM1_chr5_132817141_132835647	SHROOM1	copy fasta	chr5	132817141	132835647
a0002c0002t0015	0/0	3778	4	0	0	4	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	copy fasta	chr5	132817141	132835647
a0002c0002t0017	0/0	3779	2	0	0	2	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	copy fasta	chr5	132817141	132835647
a0002c0002t0026	0/0	3775	1	0	0	0	0	1	SHROOM1_chr5_132817141_132835647	SHROOM1	copy fasta	chr5	132817141	132835647
a0002c0002t0030	0/0	3768	1	0	0	1	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	copy fasta	chr5	132817141	132835647
a0002c0018t0001	0/0	3768	1	0	0	1	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	copy fasta	chr5	132817141	132835647
a0003c0005t0001	0/0	3768	1	1	0	0	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	copy fasta	chr5	132817141	132835647
a0003c0005t0004	0/0	3767	4	4	0	0	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	copy fasta	chr5	132817141	132835647
a0004c0006t0002	0/0	3769	2	0	0	2	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	copy fasta	chr5	132817141	132835647
a0004c0006t0003	0/0	3770	2	0	0	2	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	copy fasta	chr5	132817141	132835647
a0005c0007t0002	0/0	3769	3	0	1	1	0	1	SHROOM1_chr5_132817141_132835647	SHROOM1	copy fasta	chr5	132817141	132835647
a0006c0008t0002	0/0	3769	1	0	0	0	1	0	SHROOM1_chr5_132817141_132835647	SHROOM1	copy fasta	chr5	132817141	132835647
a0006c0008t0029	0/0	3769	1	1	0	0	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	copy fasta	chr5	132817141	132835647
a0007c0009t0004	0/0	3767	2	2	0	0	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	copy fasta	chr5	132817141	132835647
a0008c0010t0002	0/0	3769	1	0	0	0	0	1	SHROOM1_chr5_132817141_132835647	SHROOM1	copy fasta	chr5	132817141	132835647
a0009c0011t0003	0/0	3770	1	0	0	1	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	copy fasta	chr5	132817141	132835647
a0010c0012t0001	0/0	3768	1	0	1	0	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	copy fasta	chr5	132817141	132835647
a0011c0014t0001	0/0	3768	1	0	0	1	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	copy fasta	chr5	132817141	132835647
a0012c0015t0003	0/0	3770	1	0	0	1	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	copy fasta	chr5	132817141	132835647
a0013c0013t0001	0/0	3768	1	0	0	1	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	copy fasta	chr5	132817141	132835647
a0014c0016t0024	0/0	3769	1	0	0	0	0	1	SHROOM1_chr5_132817141_132835647	SHROOM1	copy fasta	chr5	132817141	132835647

actghapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	chr	start	end
a0001c0001t0001g0001	1/0	56	8	5	38	1	3	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
a0001c0001t0001g0007	0/0	9	3	3	3	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
a0001c0001t0001g0019	0/0	4	3	1	0	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
a0001c0001t0001g0026	0/0	3	3	0	0	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
a0001c0001t0001g0084	0/0	1	1	0	0	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
a0001c0001t0001g0095	0/0	1	0	0	1	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
a0001c0001t0001g0098	0/0	1	1	0	0	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
a0001c0001t0001g0101	0/0	1	0	0	1	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
a0001c0001t0001g0112	0/0	1	0	1	0	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
a0001c0001t0001g0116	0/0	1	0	0	1	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
a0001c0001t0002g0002	0/1	50	4	6	29	1	9	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
a0001c0001t0002g0003	0/0	32	3	5	19	0	5	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
a0001c0001t0002g0031	0/0	2	2	0	0	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
a0001c0001t0002g0032	0/0	2	2	0	0	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
a0001c0001t0002g0039	0/0	2	2	0	0	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
a0001c0001t0002g0047	0/0	2	2	0	0	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
a0001c0001t0002g0060	0/0	1	0	0	1	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
a0001c0001t0002g0061	0/0	1	1	0	0	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
a0001c0001t0002g0079	0/0	1	0	0	1	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
a0001c0001t0002g0089	0/0	1	0	0	1	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
a0001c0001t0002g0100	0/0	1	0	0	1	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
a0001c0001t0002g0109	0/0	1	0	0	1	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
a0001c0001t0003g0004	0/0	18	1	4	10	1	2	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
a0001c0001t0003g0011	0/0	6	5	0	1	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
a0001c0001t0003g0059	0/0	1	1	0	0	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
a0001c0001t0003g0064	0/0	1	0	1	0	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
a0001c0001t0003g0067	0/0	1	0	0	1	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
a0001c0001t0003g0068	0/0	1	0	0	1	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
a0001c0001t0003g0080	0/0	1	0	0	0	0	1	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
a0001c0001t0003g0097	0/0	1	0	0	1	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
a0001c0001t0004g0018	0/0	4	0	1	2	1	0	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
a0001c0001t0004g0022	0/0	3	0	3	0	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
a0001c0001t0004g0046	0/0	2	0	1	0	1	0	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
a0001c0001t0005g0006	0/0	9	3	1	3	1	1	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
a0001c0001t0005g0020	0/0	3	2	1	0	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
a0001c0001t0005g0042	0/0	2	0	0	2	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
a0001c0001t0005g0063	0/0	1	1	0	0	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
a0001c0001t0005g0092	0/0	1	0	0	1	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
a0001c0001t0005g0106	0/0	1	0	1	0	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
a0001c0001t0008g0023	0/0	3	0	3	0	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
a0001c0001t0009g0008	0/0	8	0	3	5	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
a0001c0001t0012g0062	0/0	1	1	0	0	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
a0001c0001t0013g0058	0/0	1	1	0	0	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
a0001c0001t0013g0083	0/0	1	1	0	0	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
a0001c0001t0013g0096	0/0	1	0	0	1	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
a0001c0001t0013g0102	0/0	1	1	0	0	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
a0001c0001t0013g0105	0/0	1	0	1	0	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
a0001c0001t0013g0110	0/0	1	0	0	1	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
a0001c0001t0014g0014	0/0	5	0	0	5	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
a0001c0001t0016g0024	0/0	3	0	3	0	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
a0001c0001t0018g0040	0/0	2	0	2	0	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
a0001c0001t0019g0041	0/0	2	0	2	0	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
a0001c0001t0021g0053	0/0	1	0	0	1	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
a0001c0001t0022g0085	0/0	1	0	0	1	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
a0001c0001t0023g0086	0/0	1	0	0	1	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
a0001c0001t0025g0090	0/0	1	1	0	0	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
a0001c0001t0028g0091	0/0	1	0	0	1	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
a0001c0001t0031g0057	0/0	1	1	0	0	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
a0001c0001t0032g0108	0/0	1	0	0	0	1	0	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
a0001c0003t0001g0005	0/0	13	1	0	12	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
a0001c0003t0001g0012	0/0	6	4	2	0	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
a0001c0003t0001g0015	0/0	5	5	0	0	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
a0001c0003t0001g0120	0/0	1	1	0	0	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
a0001c0003t0001g0121	0/0	1	1	0	0	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
a0001c0003t0002g0010	0/0	6	2	0	4	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
a0001c0003t0002g0119	0/0	1	1	0	0	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
a0001c0003t0003g0051	0/0	2	2	0	0	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
a0001c0003t0004g0028	0/0	3	2	1	0	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
a0001c0003t0004g0052	0/0	2	1	1	0	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
a0001c0003t0020g0010	0/0	1	0	0	1	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
a0001c0004t0001g0113	0/0	1	0	1	0	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
a0001c0004t0004g0115	0/0	1	1	0	0	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
a0001c0004t0008g0027	0/0	3	3	0	0	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
a0001c0004t0008g0050	0/0	2	1	1	0	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
a0001c0004t0008g0065	0/0	1	1	0	0	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
a0001c0004t0008g0066	0/0	1	1	0	0	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
a0001c0004t0027g0114	0/0	1	0	1	0	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
a0001c0017t0001g0093	0/0	1	0	0	1	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
a0002c0002t0006g0009	0/0	7	0	4	0	1	2	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
a0002c0002t0006g0029	0/0	2	0	0	2	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
a0002c0002t0006g0034	0/0	2	0	0	2	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
a0002c0002t0006g0049	0/0	2	0	0	2	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
a0002c0002t0006g0071	0/0	1	0	0	1	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
a0002c0002t0007g0013	0/0	5	0	0	5	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
a0002c0002t0007g0021	0/0	3	1	0	1	0	1	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
a0002c0002t0007g0037	0/0	2	0	1	1	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
a0002c0002t0007g0055	0/0	1	0	0	1	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
a0002c0002t0007g0070	0/0	1	0	0	1	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
a0002c0002t0007g0078	0/0	1	0	0	0	0	1	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
a0002c0002t0010g0035	0/0	2	0	0	0	2	0	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
a0002c0002t0010g0048	0/0	2	2	0	0	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
a0002c0002t0010g0056	0/0	1	0	0	1	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
a0002c0002t0010g0072	0/0	1	0	1	0	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
a0002c0002t0010g0075	0/0	1	0	0	1	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
a0002c0002t0011g0036	0/0	2	0	1	0	1	0	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
a0002c0002t0011g0054	0/0	1	0	0	1	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
a0002c0002t0011g0073	0/0	1	1	0	0	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
a0002c0002t0011g0076	0/0	1	0	0	0	0	1	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
a0002c0002t0011g0111	0/0	1	1	0	0	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
a0002c0002t0012g0030	0/0	2	0	0	2	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
a0002c0002t0012g0038	0/0	2	0	0	0	0	2	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
a0002c0002t0012g0069	0/0	1	0	0	1	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
a0002c0002t0015g0016	0/0	4	0	0	4	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
a0002c0002t0017g0033	0/0	2	0	0	2	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
a0002c0002t0026g0074	0/0	1	0	0	0	0	1	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
a0002c0002t0030g0077	0/0	1	0	0	1	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
a0002c0018t0001g0094	0/0	1	0	0	1	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
a0003c0005t0001g0087	0/0	1	1	0	0	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
a0003c0005t0004g0017	0/0	4	4	0	0	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
a0004c0006t0002g0045	0/0	2	0	0	2	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
a0004c0006t0003g0044	0/0	2	0	0	2	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
a0005c0007t0002g0025	0/0	3	0	1	1	0	1	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
a0006c0008t0002g0081	0/0	1	0	0	0	1	0	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
a0006c0008t0029g0082	0/0	1	1	0	0	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
a0007c0009t0004g0043	0/0	2	2	0	0	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
a0008c0010t0002g0107	0/0	1	0	0	0	0	1	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
a0009c0011t0003g0099	0/0	1	0	0	1	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
a0010c0012t0001g0088	0/0	1	0	1	0	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
a0011c0014t0001g0117	0/0	1	0	0	1	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
a0012c0015t0003g0118	0/0	1	0	0	1	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
a0013c0013t0001g0103	0/0	1	0	0	1	0	0	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
a0014c0016t0024g0104	0/0	1	0	0	0	0	1	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647

sampleid	ID haplotypeid	ahapid	chapid	thapid	ghapid	gpopname	popname	regionname	genename	chr	start	end
HG00099	hp1	a0001	c0001	t0002	g0002	EUR	GBR	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
HG00099	hp2	a0002	c0002	t0006	g0009	EUR	GBR	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
HG00140	hp1	a0006	c0008	t0002	g0081	EUR	GBR	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
HG00140	hp2	a0001	c0001	t0001	g0001	EUR	GBR	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
HG00323	hp1	a0002	c0002	t0010	g0035	EUR	FIN	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
HG00323	hp2	a0001	c0001	t0004	g0046	EUR	FIN	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
HG00408	hp1	a0001	c0001	t0014	g0014	EAS	CHS	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
HG00408	hp2	a0001	c0001	t0023	g0086	EAS	CHS	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
HG00423	hp1	a0001	c0001	t0001	g0001	EAS	CHS	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
HG00423	hp2	a0001	c0003	t0001	g0005	EAS	CHS	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
HG00438	hp1	a0001	c0001	t0002	g0002	EAS	CHS	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
HG00438	hp2	a0001	c0001	t0002	g0109	EAS	CHS	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
HG00544	hp1	a0002	c0002	t0007	g0013	EAS	CHS	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
HG00544	hp2	a0001	c0001	t0001	g0001	EAS	CHS	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
HG00558	hp1	a0001	c0001	t0001	g0001	EAS	CHS	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
HG00558	hp2	a0001	c0001	t0003	g0004	EAS	CHS	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
HG00597	hp1	a0001	c0001	t0028	g0091	EAS	CHS	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
HG00597	hp2	a0001	c0001	t0002	g0003	EAS	CHS	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
HG00609	hp1	a0013	c0013	t0001	g0103	EAS	CHS	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
HG00609	hp2	a0001	c0001	t0001	g0001	EAS	CHS	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
HG00621	hp1	a0001	c0001	t0001	g0001	EAS	CHS	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
HG00621	hp2	a0002	c0002	t0011	g0054	EAS	CHS	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
HG00639	hp1	a0001	c0001	t0003	g0064	AMR	PUR	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
HG00639	hp2	a0001	c0001	t0005	g0006	AMR	PUR	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
HG00642	hp1	a0001	c0003	t0001	g0012	AMR	PUR	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
HG00642	hp2	a0001	c0001	t0001	g0112	AMR	PUR	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
HG00673	hp1	a0001	c0001	t0001	g0001	EAS	CHS	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
HG00673	hp2	a0001	c0003	t0002	g0010	EAS	CHS	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
HG00735	hp1	a0001	c0001	t0001	g0007	AMR	PUR	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
HG00735	hp2	a0001	c0001	t0001	g0001	AMR	PUR	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
HG00738	hp1	a0001	c0001	t0003	g0004	AMR	PUR	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
HG00738	hp2	a0001	c0001	t0018	g0040	AMR	PUR	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
HG01069	hp1	a0001	c0001	t0003	g0004	AMR	PUR	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
HG01069	hp2	a0001	c0003	t0004	g0052	AMR	PUR	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
HG01070	hp1	a0001	c0001	t0001	g0007	AMR	PUR	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
HG01070	hp2	a0001	c0001	t0001	g0001	AMR	PUR	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
HG01071	hp1	a0001	c0001	t0001	g0001	AMR	PUR	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
HG01071	hp2	a0001	c0003	t0001	g0012	AMR	PUR	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
HG01099	hp1	a0001	c0001	t0013	g0105	AMR	PUR	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
HG01099	hp2	a0001	c0001	t0019	g0041	AMR	PUR	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
HG01106	hp1	a0001	c0001	t0002	g0002	AMR	PUR	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
HG01106	hp2	a0001	c0001	t0002	g0003	AMR	PUR	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
HG01167	hp1	a0001	c0004	t0001	g0113	AMR	PUR	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
HG01167	hp2	a0001	c0001	t0004	g0018	AMR	PUR	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
HG01168	hp1	a0001	c0001	t0002	g0003	AMR	PUR	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
HG01168	hp2	a0001	c0001	t0005	g0106	AMR	PUR	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
HG01169	hp1	a0001	c0004	t0008	g0050	AMR	PUR	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
HG01169	hp2	a0001	c0001	t0001	g0001	AMR	PUR	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
HG01175	hp1	a0001	c0001	t0002	g0003	AMR	PUR	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
HG01175	hp2	a0001	c0001	t0002	g0003	AMR	PUR	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
HG01192	hp1	a0001	c0001	t0018	g0040	AMR	PUR	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
HG01192	hp2	a0001	c0001	t0009	g0008	AMR	PUR	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
HG01243	hp1	a0001	c0004	t0027	g0114	AMR	PUR	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
HG01243	hp2	a0001	c0001	t0005	g0020	AMR	PUR	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
HG01255	hp1	a0002	c0002	t0007	g0037	AMR	CLM	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
HG01255	hp2	a0005	c0007	t0002	g0025	AMR	CLM	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
HG01256	hp1	a0001	c0001	t0002	g0002	AMR	CLM	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
HG01256	hp2	a0002	c0002	t0010	g0072	AMR	CLM	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
HG01257	hp1	a0001	c0001	t0002	g0002	AMR	CLM	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
HG01257	hp2	a0002	c0002	t0006	g0009	AMR	CLM	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
HG01261	hp1	a0001	c0001	t0004	g0022	AMR	CLM	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
HG01261	hp2	a0001	c0001	t0002	g0002	AMR	CLM	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
HG01346	hp1	a0001	c0001	t0003	g0004	AMR	CLM	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
HG01346	hp2	a0010	c0012	t0001	g0088	AMR	CLM	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
HG01358	hp1	a0002	c0002	t0006	g0009	AMR	CLM	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
HG01358	hp2	a0001	c0003	t0004	g0028	AMR	CLM	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
HG01361	hp1	a0002	c0002	t0006	g0009	AMR	CLM	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
HG01361	hp2	a0001	c0001	t0002	g0002	AMR	CLM	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
HG01433	hp1	a0001	c0001	t0002	g0002	AMR	CLM	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
HG01433	hp2	a0001	c0001	t0008	g0023	AMR	CLM	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
HG01496	hp1	a0002	c0002	t0006	g0009	AMR	CLM	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
HG01496	hp2	a0001	c0001	t0001	g0019	AMR	CLM	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
HG01516	hp1	a0001	c0001	t0003	g0004	EUR	IBS	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
HG01516	hp2	a0002	c0002	t0010	g0035	EUR	IBS	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
HG01517	hp1	a0002	c0002	t0011	g0036	EUR	IBS	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
HG01517	hp2	a0001	c0001	t0005	g0006	EUR	IBS	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
HG01884	hp1	a0001	c0001	t0002	g0061	AFR	ACB	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
HG01884	hp2	a0001	c0001	t0002	g0002	AFR	ACB	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
HG01891	hp1	a0001	c0001	t0002	g0002	AFR	ACB	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
HG01891	hp2	a0001	c0001	t0002	g0047	AFR	ACB	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
HG01934	hp1	a0001	c0001	t0019	g0041	AMR	PEL	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
HG01934	hp2	a0001	c0001	t0016	g0024	AMR	PEL	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
HG01943	hp1	a0001	c0001	t0002	g0003	AMR	PEL	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
HG01943	hp2	a0001	c0001	t0016	g0024	AMR	PEL	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
HG01952	hp1	a0001	c0001	t0004	g0022	AMR	PEL	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
HG01952	hp2	a0001	c0001	t0004	g0046	AMR	PEL	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
HG01978	hp1	a0001	c0001	t0009	g0008	AMR	PEL	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
HG01978	hp2	a0001	c0001	t0003	g0004	AMR	PEL	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
HG01981	hp1	a0001	c0001	t0001	g0001	AMR	PEL	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
HG01981	hp2	a0001	c0001	t0016	g0024	AMR	PEL	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
HG01993	hp1	a0001	c0001	t0008	g0023	AMR	PEL	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
HG01993	hp2	a0002	c0002	t0011	g0036	AMR	PEL	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
HG02004	hp1	a0001	c0001	t0009	g0008	AMR	PEL	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
HG02004	hp2	a0001	c0001	t0008	g0023	AMR	PEL	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
HG02015	hp1	a0001	c0001	t0002	g0002	EAS	KHV	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
HG02015	hp2	a0001	c0003	t0001	g0005	EAS	KHV	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
HG02027	hp1	a0001	c0001	t0003	g0004	EAS	KHV	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
HG02027	hp2	a0001	c0001	t0003	g0068	EAS	KHV	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
HG02040	hp1	a0001	c0001	t0001	g0001	EAS	KHV	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
HG02040	hp2	a0001	c0001	t0001	g0007	EAS	KHV	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
HG02055	hp1	a0001	c0001	t0002	g0032	AFR	ACB	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
HG02055	hp2	a0001	c0003	t0001	g0015	AFR	ACB	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
HG02056	hp1	a0001	c0001	t0001	g0001	EAS	KHV	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
HG02056	hp2	a0001	c0001	t0001	g0001	EAS	KHV	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
HG02071	hp1	a0001	c0001	t0002	g0003	EAS	KHV	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
HG02071	hp2	a0001	c0001	t0002	g0089	EAS	KHV	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
HG02074	hp1	a0001	c0001	t0002	g0003	EAS	KHV	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
HG02074	hp2	a0001	c0001	t0002	g0003	EAS	KHV	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
HG02080	hp1	a0001	c0001	t0002	g0003	EAS	KHV	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
HG02080	hp2	a0001	c0017	t0001	g0093	EAS	KHV	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
HG02083	hp1	a0001	c0001	t0002	g0002	EAS	KHV	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
HG02083	hp2	a0002	c0002	t0010	g0056	EAS	KHV	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
HG02129	hp1	a0002	c0002	t0007	g0013	EAS	KHV	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
HG02129	hp2	a0002	c0002	t0007	g0013	EAS	KHV	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
HG02132	hp1	a0001	c0003	t0001	g0005	EAS	KHV	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
HG02132	hp2	a0001	c0001	t0001	g0001	EAS	KHV	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
HG02135	hp1	a0001	c0003	t0001	g0005	EAS	KHV	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
HG02135	hp2	a0001	c0001	t0002	g0100	EAS	KHV	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
HG02145	hp1	a0001	c0001	t0005	g0006	AFR	ACB	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
HG02145	hp2	a0003	c0005	t0001	g0087	AFR	ACB	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
HG02148	hp1	a0001	c0001	t0004	g0022	AMR	PEL	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
HG02148	hp2	a0001	c0001	t0001	g0007	AMR	PEL	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
HG02155	hp1	a0001	c0003	t0001	g0005	EAS	CDX	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
HG02155	hp2	a0001	c0001	t0001	g0001	EAS	CDX	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
HG02165	hp1	a0001	c0001	t0001	g0001	EAS	CDX	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
HG02165	hp2	a0001	c0001	t0001	g0101	EAS	CDX	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
HG02258	hp1	a0001	c0001	t0001	g0001	AFR	ACB	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
HG02258	hp2	a0001	c0003	t0002	g0010	AFR	ACB	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
HG02280	hp1	a0001	c0001	t0005	g0020	AFR	ACB	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
HG02280	hp2	a0001	c0001	t0002	g0003	AFR	ACB	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
HG02451	hp1	a0001	c0001	t0002	g0002	AFR	ACB	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
HG02451	hp2	a0002	c0002	t0011	g0111	AFR	ACB	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
HG02523	hp1	a0001	c0001	t0001	g0001	EAS	KHV	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
HG02523	hp2	a0002	c0002	t0007	g0037	EAS	KHV	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
HG02572	hp1	a0001	c0003	t0003	g0051	AFR	GWD	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
HG02572	hp2	a0001	c0001	t0002	g0003	AFR	GWD	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
HG02615	hp1	a0001	c0004	t0008	g0027	AFR	GWD	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
HG02615	hp2	a0001	c0004	t0008	g0066	AFR	GWD	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
HG02622	hp1	a0001	c0001	t0005	g0006	AFR	GWD	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
HG02622	hp2	a0001	c0001	t0001	g0001	AFR	GWD	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
HG02630	hp1	a0001	c0001	t0003	g0011	AFR	GWD	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
HG02630	hp2	a0002	c0002	t0010	g0048	AFR	GWD	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
HG02647	hp1	a0001	c0001	t0005	g0020	AFR	GWD	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
HG02647	hp2	a0001	c0001	t0002	g0047	AFR	GWD	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
HG02683	hp1	a0001	c0001	t0002	g0002	SAS	PJL	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
HG02683	hp2	a0001	c0001	t0001	g0001	SAS	PJL	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
HG02717	hp1	a0001	c0001	t0001	g0007	AFR	GWD	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
HG02717	hp2	a0001	c0003	t0001	g0012	AFR	GWD	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
HG02723	hp1	a0001	c0001	t0001	g0026	AFR	GWD	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
HG02723	hp2	a0001	c0004	t0008	g0027	AFR	GWD	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
HG02735	hp1	a0002	c0002	t0006	g0009	SAS	PJL	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
HG02735	hp2	a0014	c0016	t0024	g0104	SAS	PJL	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
HG02738	hp1	a0001	c0001	t0002	g0002	SAS	PJL	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
HG02738	hp2	a0001	c0001	t0002	g0003	SAS	PJL	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
HG02809	hp1	a0003	c0005	t0004	g0017	AFR	GWD	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
HG02809	hp2	a0001	c0001	t0001	g0026	AFR	GWD	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
HG02818	hp1	a0001	c0003	t0001	g0015	AFR	GWD	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
HG02818	hp2	a0001	c0004	t0004	g0115	AFR	GWD	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
HG02886	hp1	a0001	c0004	t0008	g0027	AFR	GWD	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
HG02886	hp2	a0003	c0005	t0004	g0017	AFR	GWD	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
HG02895	hp1	a0001	c0001	t0001	g0001	AFR	GWD	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
HG02895	hp2	a0001	c0003	t0001	g0012	AFR	GWD	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
HG02896	hp1	a0001	c0001	t0001	g0007	AFR	GWD	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
HG02896	hp2	a0007	c0009	t0004	g0043	AFR	GWD	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
HG02897	hp1	a0001	c0003	t0004	g0052	AFR	GWD	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
HG02897	hp2	a0007	c0009	t0004	g0043	AFR	GWD	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
HG02922	hp1	a0001	c0001	t0002	g0031	AFR	ESN	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
HG02922	hp2	a0001	c0001	t0002	g0032	AFR	ESN	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
HG02965	hp1	a0001	c0001	t0001	g0001	AFR	ESN	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
HG02965	hp2	a0001	c0001	t0031	g0057	AFR	ESN	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
HG02970	hp1	a0002	c0002	t0010	g0048	AFR	ESN	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
HG02970	hp2	a0001	c0003	t0002	g0119	AFR	ESN	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
HG02976	hp1	a0001	c0001	t0003	g0011	AFR	ESN	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
HG02976	hp2	a0001	c0003	t0001	g0015	AFR	ESN	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
HG03017	hp1	a0008	c0010	t0002	g0107	SAS	PJL	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
HG03017	hp2	a0001	c0001	t0001	g0001	SAS	PJL	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
HG03041	hp1	a0001	c0001	t0001	g0019	AFR	GWD	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
HG03041	hp2	a0001	c0003	t0001	g0012	AFR	GWD	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
HG03098	hp1	a0001	c0001	t0013	g0058	AFR	MSL	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
HG03098	hp2	a0001	c0003	t0001	g0015	AFR	MSL	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
HG03139	hp1	a0001	c0001	t0003	g0011	AFR	ESN	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
HG03139	hp2	a0003	c0005	t0004	g0017	AFR	ESN	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
HG03195	hp1	a0001	c0001	t0001	g0019	AFR	ESN	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
HG03195	hp2	a0001	c0003	t0004	g0028	AFR	ESN	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
HG03209	hp1	a0001	c0001	t0002	g0031	AFR	MSL	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
HG03209	hp2	a0001	c0001	t0002	g0039	AFR	MSL	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
HG03225	hp1	a0003	c0005	t0004	g0017	AFR	MSL	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
HG03225	hp2	a0001	c0001	t0002	g0039	AFR	MSL	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
HG03239	hp1	a0002	c0002	t0012	g0038	SAS	PJL	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
HG03239	hp2	a0001	c0001	t0005	g0006	SAS	PJL	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
HG03453	hp1	a0001	c0001	t0003	g0011	AFR	MSL	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
HG03453	hp2	a0001	c0001	t0002	g0002	AFR	MSL	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
HG03486	hp1	a0001	c0001	t0001	g0026	AFR	MSL	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
HG03486	hp2	a0001	c0001	t0012	g0062	AFR	MSL	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
HG03491	hp1	a0001	c0001	t0003	g0004	SAS	PJL	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
HG03491	hp2	a0002	c0002	t0007	g0078	SAS	PJL	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
HG03516	hp1	a0001	c0003	t0004	g0028	AFR	ESN	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
HG03516	hp2	a0001	c0001	t0001	g0007	AFR	ESN	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
HG03540	hp1	a0001	c0001	t0003	g0004	AFR	GWD	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
HG03540	hp2	a0001	c0001	t0013	g0083	AFR	GWD	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
HG03579	hp1	a0001	c0001	t0001	g0019	AFR	MSL	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
HG03579	hp2	a0001	c0003	t0001	g0120	AFR	MSL	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
HG03654	hp1	a0002	c0002	t0007	g0021	SAS	PJL	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
HG03654	hp2	a0001	c0001	t0002	g0002	SAS	PJL	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
HG03669	hp1	a0002	c0002	t0006	g0009	SAS	PJL	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
HG03669	hp2	a0001	c0001	t0002	g0002	SAS	PJL	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
HG03688	hp1	a0001	c0001	t0002	g0003	SAS	STU	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
HG03688	hp2	a0001	c0001	t0003	g0080	SAS	STU	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
HG03704	hp1	a0001	c0001	t0001	g0001	SAS	PJL	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
HG03704	hp2	a0001	c0001	t0002	g0002	SAS	PJL	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
HG03710	hp1	a0005	c0007	t0002	g0025	SAS	PJL	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
HG03710	hp2	a0002	c0002	t0012	g0038	SAS	PJL	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
HG03834	hp1	a0001	c0001	t0003	g0004	SAS	BEB	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
HG03834	hp2	a0002	c0002	t0026	g0074	SAS	BEB	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
HG04115	hp1	a0001	c0001	t0002	g0003	SAS	STU	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
HG04115	hp2	a0001	c0001	t0002	g0002	SAS	STU	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
HG04184	hp1	a0002	c0002	t0011	g0076	SAS	BEB	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
HG04184	hp2	a0001	c0001	t0002	g0002	SAS	BEB	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
HG04204	hp1	a0001	c0001	t0002	g0002	SAS	STU	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
HG04204	hp2	a0001	c0001	t0002	g0003	SAS	STU	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
HG04228	hp1	a0001	c0001	t0002	g0003	SAS	STU	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
HG04228	hp2	a0001	c0001	t0002	g0002	SAS	STU	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
NA18522	hp1	a0001	c0001	t0005	g0006	AFR	YRI	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
NA18522	hp2	a0001	c0001	t0001	g0001	AFR	YRI	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
NA18612	hp1	a0001	c0001	t0002	g0003	EAS	CHB	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
NA18612	hp2	a0001	c0001	t0002	g0003	EAS	CHB	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
NA18747	hp1	a0001	c0001	t0004	g0018	EAS	CHB	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
NA18747	hp2	a0001	c0001	t0004	g0018	EAS	CHB	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
NA18906	hp1	a0001	c0003	t0002	g0010	AFR	YRI	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
NA18906	hp2	a0001	c0001	t0001	g0001	AFR	YRI	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
NA18939	hp1	a0002	c0002	t0012	g0030	EAS	JPT	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
NA18939	hp2	a0001	c0001	t0001	g0001	EAS	JPT	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
NA18941	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
NA18941	hp2	a0001	c0001	t0002	g0002	EAS	JPT	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
NA18942	hp1	a0002	c0002	t0006	g0034	EAS	JPT	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
NA18942	hp2	a0001	c0003	t0001	g0005	EAS	JPT	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
NA18943	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
NA18943	hp2	a0001	c0001	t0001	g0001	EAS	JPT	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
NA18946	hp1	a0001	c0001	t0002	g0003	EAS	JPT	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
NA18946	hp2	a0001	c0001	t0002	g0002	EAS	JPT	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
NA18951	hp1	a0001	c0001	t0002	g0002	EAS	JPT	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
NA18951	hp2	a0001	c0001	t0002	g0003	EAS	JPT	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
NA18952	hp1	a0001	c0001	t0002	g0002	EAS	JPT	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
NA18952	hp2	a0001	c0001	t0002	g0079	EAS	JPT	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
NA18953	hp1	a0002	c0002	t0007	g0013	EAS	JPT	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
NA18953	hp2	a0001	c0001	t0013	g0096	EAS	JPT	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
NA18956	hp1	a0002	c0002	t0017	g0033	EAS	JPT	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
NA18956	hp2	a0001	c0003	t0020	g0010	EAS	JPT	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
NA18957	hp1	a0001	c0001	t0001	g0007	EAS	JPT	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
NA18957	hp2	a0001	c0001	t0001	g0001	EAS	JPT	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
NA18959	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
NA18959	hp2	a0004	c0006	t0003	g0044	EAS	JPT	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
NA18960	hp1	a0001	c0001	t0014	g0014	EAS	JPT	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
NA18960	hp2	a0002	c0002	t0010	g0075	EAS	JPT	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
NA18962	hp1	a0001	c0001	t0002	g0002	EAS	JPT	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
NA18962	hp2	a0001	c0001	t0002	g0003	EAS	JPT	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
NA18963	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
NA18963	hp2	a0004	c0006	t0002	g0045	EAS	JPT	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
NA18964	hp1	a0001	c0001	t0002	g0002	EAS	JPT	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
NA18964	hp2	a0001	c0001	t0022	g0085	EAS	JPT	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
NA18966	hp1	a0001	c0001	t0003	g0097	EAS	JPT	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
NA18966	hp2	a0001	c0001	t0003	g0004	EAS	JPT	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
NA18968	hp1	a0002	c0002	t0012	g0030	EAS	JPT	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
NA18968	hp2	a0001	c0001	t0005	g0006	EAS	JPT	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
NA18969	hp1	a0001	c0001	t0005	g0042	EAS	JPT	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
NA18969	hp2	a0001	c0001	t0003	g0004	EAS	JPT	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
NA18970	hp1	a0001	c0001	t0002	g0003	EAS	JPT	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
NA18970	hp2	a0001	c0001	t0002	g0002	EAS	JPT	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
NA18971	hp1	a0001	c0001	t0002	g0002	EAS	JPT	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
NA18971	hp2	a0001	c0001	t0001	g0001	EAS	JPT	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
NA18973	hp1	a0001	c0001	t0003	g0004	EAS	JPT	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
NA18973	hp2	a0001	c0001	t0009	g0008	EAS	JPT	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
NA18975	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
NA18975	hp2	a0001	c0001	t0003	g0004	EAS	JPT	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
NA18977	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
NA18977	hp2	a0002	c0002	t0015	g0016	EAS	JPT	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
NA18978	hp1	a0001	c0003	t0002	g0010	EAS	JPT	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
NA18978	hp2	a0001	c0001	t0001	g0001	EAS	JPT	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
NA18979	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
NA18979	hp2	a0001	c0001	t0002	g0002	EAS	JPT	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
NA18980	hp1	a0001	c0001	t0002	g0002	EAS	JPT	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
NA18980	hp2	a0002	c0002	t0015	g0016	EAS	JPT	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
NA18981	hp1	a0004	c0006	t0003	g0044	EAS	JPT	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
NA18981	hp2	a0005	c0007	t0002	g0025	EAS	JPT	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
NA18982	hp1	a0002	c0002	t0012	g0069	EAS	JPT	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
NA18982	hp2	a0001	c0003	t0001	g0005	EAS	JPT	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
NA18983	hp1	a0002	c0002	t0006	g0034	EAS	JPT	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
NA18983	hp2	a0001	c0001	t0001	g0001	EAS	JPT	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
NA18985	hp1	a0001	c0001	t0001	g0095	EAS	JPT	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
NA18985	hp2	a0001	c0001	t0001	g0001	EAS	JPT	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
NA18990	hp1	a0001	c0001	t0002	g0002	EAS	JPT	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
NA18990	hp2	a0001	c0001	t0002	g0003	EAS	JPT	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
NA18991	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
NA18991	hp2	a0012	c0015	t0003	g0118	EAS	JPT	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
NA18992	hp1	a0001	c0003	t0002	g0010	EAS	JPT	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
NA18992	hp2	a0001	c0001	t0009	g0008	EAS	JPT	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
NA18993	hp1	a0001	c0001	t0002	g0002	EAS	JPT	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
NA18993	hp2	a0001	c0001	t0002	g0003	EAS	JPT	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
NA18994	hp1	a0002	c0002	t0017	g0033	EAS	JPT	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
NA18994	hp2	a0001	c0001	t0003	g0011	EAS	JPT	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
NA18995	hp1	a0001	c0001	t0002	g0003	EAS	JPT	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
NA18995	hp2	a0002	c0002	t0006	g0049	EAS	JPT	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
NA18997	hp1	a0002	c0002	t0007	g0013	EAS	JPT	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
NA18997	hp2	a0001	c0001	t0005	g0006	EAS	JPT	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
NA18998	hp1	a0001	c0001	t0003	g0004	EAS	JPT	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
NA18998	hp2	a0002	c0002	t0006	g0049	EAS	JPT	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
NA19000	hp1	a0001	c0001	t0002	g0060	EAS	JPT	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
NA19000	hp2	a0001	c0001	t0002	g0002	EAS	JPT	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
NA19004	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
NA19004	hp2	a0001	c0001	t0001	g0116	EAS	JPT	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
NA19005	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
NA19005	hp2	a0001	c0001	t0021	g0053	EAS	JPT	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
NA19007	hp1	a0001	c0001	t0002	g0002	EAS	JPT	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
NA19007	hp2	a0001	c0001	t0002	g0003	EAS	JPT	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
NA19009	hp1	a0001	c0001	t0014	g0014	EAS	JPT	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
NA19009	hp2	a0001	c0001	t0001	g0001	EAS	JPT	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
NA19010	hp1	a0002	c0002	t0007	g0055	EAS	JPT	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
NA19010	hp2	a0001	c0001	t0001	g0001	EAS	JPT	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
NA19011	hp1	a0001	c0001	t0002	g0002	EAS	JPT	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
NA19011	hp2	a0001	c0001	t0002	g0002	EAS	JPT	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
NA19012	hp1	a0002	c0002	t0006	g0071	EAS	JPT	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
NA19012	hp2	a0001	c0001	t0001	g0001	EAS	JPT	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
NA19030	hp1	a0001	c0001	t0025	g0090	AFR	LWK	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
NA19030	hp2	a0001	c0003	t0003	g0051	AFR	LWK	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
NA19043	hp1	a0001	c0001	t0001	g0098	AFR	LWK	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
NA19043	hp2	a0001	c0001	t0001	g0084	AFR	LWK	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
NA19055	hp1	a0001	c0001	t0002	g0003	EAS	JPT	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
NA19055	hp2	a0001	c0001	t0002	g0003	EAS	JPT	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
NA19056	hp1	a0001	c0001	t0002	g0003	EAS	JPT	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
NA19056	hp2	a0001	c0001	t0002	g0002	EAS	JPT	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
NA19057	hp1	a0001	c0001	t0002	g0002	EAS	JPT	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
NA19057	hp2	a0002	c0002	t0030	g0077	EAS	JPT	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
NA19058	hp1	a0001	c0001	t0005	g0042	EAS	JPT	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
NA19058	hp2	a0001	c0001	t0005	g0006	EAS	JPT	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
NA19063	hp1	a0002	c0002	t0006	g0029	EAS	JPT	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
NA19063	hp2	a0001	c0001	t0001	g0001	EAS	JPT	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
NA19064	hp1	a0001	c0003	t0002	g0010	EAS	JPT	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
NA19064	hp2	a0001	c0001	t0002	g0002	EAS	JPT	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
NA19065	hp1	a0001	c0003	t0001	g0005	EAS	JPT	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
NA19065	hp2	a0001	c0001	t0002	g0002	EAS	JPT	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
NA19066	hp1	a0001	c0001	t0002	g0002	EAS	JPT	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
NA19066	hp2	a0009	c0011	t0003	g0099	EAS	JPT	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
NA19067	hp1	a0001	c0001	t0003	g0004	EAS	JPT	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
NA19067	hp2	a0001	c0003	t0001	g0005	EAS	JPT	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
NA19068	hp1	a0001	c0003	t0001	g0005	EAS	JPT	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
NA19068	hp2	a0001	c0001	t0001	g0001	EAS	JPT	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
NA19070	hp1	a0001	c0001	t0005	g0092	EAS	JPT	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
NA19070	hp2	a0001	c0001	t0001	g0001	EAS	JPT	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
NA19072	hp1	a0001	c0001	t0009	g0008	EAS	JPT	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
NA19072	hp2	a0001	c0003	t0001	g0005	EAS	JPT	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
NA19074	hp1	a0001	c0001	t0009	g0008	EAS	JPT	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
NA19074	hp2	a0001	c0001	t0013	g0110	EAS	JPT	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
NA19076	hp1	a0002	c0002	t0015	g0016	EAS	JPT	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
NA19076	hp2	a0001	c0001	t0001	g0001	EAS	JPT	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
NA19077	hp1	a0001	c0001	t0002	g0002	EAS	JPT	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
NA19077	hp2	a0001	c0003	t0001	g0005	EAS	JPT	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
NA19079	hp1	a0001	c0001	t0003	g0067	EAS	JPT	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
NA19079	hp2	a0002	c0002	t0007	g0070	EAS	JPT	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
NA19080	hp1	a0002	c0018	t0001	g0094	EAS	JPT	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
NA19080	hp2	a0001	c0001	t0003	g0004	EAS	JPT	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
NA19081	hp1	a0001	c0001	t0001	g0007	EAS	JPT	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
NA19081	hp2	a0001	c0001	t0009	g0008	EAS	JPT	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
NA19082	hp1	a0002	c0002	t0015	g0016	EAS	JPT	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
NA19082	hp2	a0011	c0014	t0001	g0117	EAS	JPT	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
NA19084	hp1	a0002	c0002	t0006	g0029	EAS	JPT	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
NA19084	hp2	a0004	c0006	t0002	g0045	EAS	JPT	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
NA19085	hp1	a0002	c0002	t0007	g0021	EAS	JPT	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
NA19085	hp2	a0001	c0001	t0002	g0002	EAS	JPT	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
NA19088	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
NA19088	hp2	a0001	c0001	t0002	g0002	EAS	JPT	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
NA19090	hp1	a0001	c0001	t0003	g0004	EAS	JPT	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
NA19090	hp2	a0001	c0001	t0014	g0014	EAS	JPT	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
NA19091	hp1	a0001	c0001	t0014	g0014	EAS	JPT	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
NA19091	hp2	a0001	c0001	t0002	g0002	EAS	JPT	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
NA19240	hp1	a0001	c0001	t0003	g0059	AFR	YRI	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
NA19240	hp2	a0002	c0002	t0007	g0021	AFR	YRI	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
NA20129	hp1	a0001	c0003	t0001	g0015	AFR	ASW	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
NA20129	hp2	a0001	c0003	t0001	g0012	AFR	ASW	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
NA20752	hp1	a0001	c0001	t0032	g0108	EUR	TSI	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
NA20752	hp2	a0001	c0001	t0004	g0018	EUR	TSI	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
HG02486	hp1	a0001	c0001	t0001	g0001	AFR	ACB	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
HG02486	hp2	a0002	c0002	t0011	g0073	AFR	ACB	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
HG02559	hp1	a0001	c0003	t0001	g0121	AFR	ACB	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
HG02559	hp2	a0001	c0001	t0003	g0011	AFR	ACB	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
HG03471	hp1	a0001	c0001	t0001	g0001	AFR	MSL	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
HG03471	hp2	a0001	c0001	t0005	g0063	AFR	MSL	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
HG06807	hp1	a0001	c0001	t0013	g0102	AFR	USA	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
HG06807	hp2	a0006	c0008	t0029	g0082	AFR	USA	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
NA18955	hp1	a0001	c0001	t0002	g0003	EAS	JPT	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
NA18955	hp2	a0001	c0001	t0002	g0002	EAS	JPT	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
NA20300	hp1	a0001	c0004	t0008	g0065	AFR	USA	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
NA20300	hp2	a0001	c0001	t0002	g0003	AFR	USA	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
NA21309	hp1	a0001	c0003	t0001	g0005	AFR	LWK	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
NA21309	hp2	a0001	c0004	t0008	g0050	AFR	LWK	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
homoSapiens_chm13v2	hp1	a0001	c0001	t0002	g0002	REF	REF	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647
homoSapiens_grch38	hp1	a0001	c0001	t0001	g0001	REF	REF	SHROOM1_chr5_132817141_132835647	SHROOM1	chr5	132817141	132835647

chr:pos	ref	alt	# # of ahapid:amino-acid(protein) level	ahapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	hgvs_p	genename	geneid	featuretype	featureid	transcript_biotype	rank	cdna cdna pos length	cds cds pos length	aa aa pos length	chr	pos
chr5:132822872	G G	A A	1	a0012 a0012	1	NA18991.hp2 NA18991.hp2	missense_variant	MODERATE	c.2483C>T c.2483C>T	p.Ala828Val p.Ala828Val	SHROOM1	ENSG00000164403.15	transcript	ENST00000378679.8	protein_coding	10/10	3037/3768	2483/2559	828/852	chr5	132822872
chr5:132823264	C C	G G	2	a0004 a0009 a0004 a0009	5	NA18959.hp2 NA18963.hp2 NA18981.hp1 others(2): Show NA18959.hp2 NA18963.hp2 NA18981.hp1 NA19066.hp2 NA19084.hp2	missense_variant	MODERATE	c.2212G>C c.2212G>C	p.Asp738His p.Asp738His	SHROOM1	ENSG00000164403.15	transcript	ENST00000378679.8	protein_coding	9/10	2766/3768	2212/2559	738/852	chr5	132823264
chr5:132823476	G G	T T	1	a0011 a0011	1	NA19082.hp2 NA19082.hp2	missense_variant	MODERATE	c.2000C>A c.2000C>A	p.Thr667Lys p.Thr667Lys	SHROOM1	ENSG00000164403.15	transcript	ENST00000378679.8	protein_coding	9/10	2554/3768	2000/2559	667/852	chr5	132823476
chr5:132823655	G G	A A	1	a0013 a0013	1	HG00609.hp1 HG00609.hp1	missense_variant	MODERATE	c.1921C>T c.1921C>T	p.Pro641Ser p.Pro641Ser	SHROOM1	ENSG00000164403.15	transcript	ENST00000378679.8	protein_coding	8/10	2475/3768	1921/2559	641/852	chr5	132823655
chr5:132824298	G G	T T	1	a0010 a0010	1	HG01346.hp2 HG01346.hp2	missense_variant	MODERATE	c.1363C>A c.1363C>A	p.Gln455Lys p.Gln455Lys	SHROOM1	ENSG00000164403.15	transcript	ENST00000378679.8	protein_coding	7/10	1917/3768	1363/2559	455/852	chr5	132824298
chr5:132824387	C C	T T	1	a0009 a0009	1	NA19066.hp2 NA19066.hp2	missense_variant	MODERATE	c.1274G>A c.1274G>A	p.Gly425Asp p.Gly425Asp	SHROOM1	ENSG00000164403.15	transcript	ENST00000378679.8	protein_coding	7/10	1828/3768	1274/2559	425/852	chr5	132824387
chr5:132824636	G G	A A	1	a0014 a0014	1	HG02735.hp2 HG02735.hp2	missense_variant	MODERATE	c.1220C>T c.1220C>T	p.Ala407Val p.Ala407Val	SHROOM1	ENSG00000164403.15	transcript	ENST00000378679.8	protein_coding	6/10	1774/3768	1220/2559	407/852	chr5	132824636
chr5:132824796	C C	T T	1	a0008 a0008	1	HG03017.hp1 HG03017.hp1	missense_variant	MODERATE	c.1060G>A c.1060G>A	p.Val354Met p.Val354Met	SHROOM1	ENSG00000164403.15	transcript	ENST00000378679.8	protein_coding	6/10	1614/3768	1060/2559	354/852	chr5	132824796
chr5:132825426	C C	T T	1	a0007 a0007	2	HG02896.hp2 HG02897.hp2 HG02896.hp2 HG02897.hp2	missense_variant	MODERATE	c.715G>A c.715G>A	p.Ala239Thr p.Ala239Thr	SHROOM1	ENSG00000164403.15	transcript	ENST00000378679.8	protein_coding	4/10	1269/3768	715/2559	239/852	chr5	132825426
chr5:132825563	C C	T T	1	a0006 a0006	2	HG00140.hp1 HG06807.hp2 HG00140.hp1 HG06807.hp2	missense_variant	MODERATE	c.578G>A c.578G>A	p.Gly193Asp p.Gly193Asp	SHROOM1	ENSG00000164403.15	transcript	ENST00000378679.8	protein_coding	4/10	1132/3768	578/2559	193/852	chr5	132825563
chr5:132825602	G G	A A	1	a0002 a0002	54	HG00099.hp2 HG00323.hp1 HG00544.hp1 others(51): Show HG00099.hp2 HG00323.hp1 HG00544.hp1 HG00621.hp2 HG01255.hp1 HG01256.hp2 HG01257.hp2 HG01358.hp1 HG01361.hp1 HG01496.hp1 HG01516.hp2 HG01517.hp1 HG01993.hp2 HG02083.hp2 HG02129.hp1 HG02129.hp2 HG02451.hp2 HG02486.hp2 HG02523.hp2 HG02630.hp2 HG02735.hp1 HG02970.hp1 HG03239.hp1 HG03491.hp2 HG03654.hp1 HG03669.hp1 HG03710.hp2 HG03834.hp2 HG04184.hp1 NA18939.hp1 NA18942.hp1 NA18953.hp1 NA18956.hp1 NA18960.hp2 NA18968.hp1 NA18977.hp2 NA18980.hp2 NA18982.hp1 NA18983.hp1 NA18994.hp1 NA18995.hp2 NA18997.hp1 NA18998.hp2 NA19010.hp1 NA19012.hp1 NA19057.hp2 NA19063.hp1 NA19076.hp1 NA19079.hp2 NA19080.hp1 NA19082.hp1 NA19084.hp1 NA19085.hp1 NA19240.hp2	missense_variant	MODERATE	c.539C>T c.539C>T	p.Pro180Leu p.Pro180Leu	SHROOM1	ENSG00000164403.15	transcript	ENST00000378679.8	protein_coding	4/10	1093/3768	539/2559	180/852	chr5	132825602
chr5:132825830	G G	A A	1	a0005 a0005	3	HG01255.hp2 HG03710.hp1 NA18981.hp2 HG01255.hp2 HG03710.hp1 NA18981.hp2	missense_variant	MODERATE	c.311C>T c.311C>T	p.Pro104Leu p.Pro104Leu	SHROOM1	ENSG00000164403.15	transcript	ENST00000378679.8	protein_coding	4/10	865/3768	311/2559	104/852	chr5	132825830
chr5:132825930	C C	G G	1	a0003 a0003	5	HG02145.hp2 HG02809.hp1 HG02886.hp2 others(2): Show HG02145.hp2 HG02809.hp1 HG02886.hp2 HG03139.hp2 HG03225.hp1	missense_variant	MODERATE	c.211G>C c.211G>C	p.Gly71Arg p.Gly71Arg	SHROOM1	ENSG00000164403.15	transcript	ENST00000378679.8	protein_coding	4/10	765/3768	211/2559	71/852	chr5	132825930
chr5:132830594	C C	G G	1	a0001 a0001	1	NA19005.hp2 NA19005.hp2	splice_region_variant	LOW	c.-501G>C c.-501G>C		SHROOM1	ENSG00000164403.15	transcript	ENST00000378679.8	protein_coding	1/10				chr5	132830594
chr5:132830595	T T	A A	1	a0001 a0001	1	NA19005.hp2 NA19005.hp2	splice_region_variant	LOW	c.-502A>T c.-502A>T		SHROOM1	ENSG00000164403.15	transcript	ENST00000378679.8	protein_coding	1/10				chr5	132830595

chr:pos	ref	alt	# # of chapid	chapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	hgvs_p	genename	geneid	featuretype	featureid	transcript_biotype	rank	cdna cdna pos length	cds cds pos length	aa aa pos length	chr	pos
chr5:132823442	C C	T T	1	a0002c0002 a0002c0002	53	HG00099.hp2 HG00323.hp1 HG00544.hp1 others(50): Show HG00099.hp2 HG00323.hp1 HG00544.hp1 HG00621.hp2 HG01255.hp1 HG01256.hp2 HG01257.hp2 HG01358.hp1 HG01361.hp1 HG01496.hp1 HG01516.hp2 HG01517.hp1 HG01993.hp2 HG02083.hp2 HG02129.hp1 HG02129.hp2 HG02451.hp2 HG02486.hp2 HG02523.hp2 HG02630.hp2 HG02735.hp1 HG02970.hp1 HG03239.hp1 HG03491.hp2 HG03654.hp1 HG03669.hp1 HG03710.hp2 HG03834.hp2 HG04184.hp1 NA18939.hp1 NA18942.hp1 NA18953.hp1 NA18956.hp1 NA18960.hp2 NA18968.hp1 NA18977.hp2 NA18980.hp2 NA18982.hp1 NA18983.hp1 NA18994.hp1 NA18995.hp2 NA18997.hp1 NA18998.hp2 NA19010.hp1 NA19012.hp1 NA19057.hp2 NA19063.hp1 NA19076.hp1 NA19079.hp2 NA19082.hp1 NA19084.hp1 NA19085.hp1 NA19240.hp2	synonymous_variant	LOW	c.2034G>A c.2034G>A	p.Ala678Ala p.Ala678Ala	SHROOM1	ENSG00000164403.15	transcript	ENST00000378679.8	protein_coding	9/10	2588/3768	2034/2559	678/852	chr5	132823442
chr5:132823659	C C	A A	1	a0001c0004 a0001c0004	10	HG01167.hp1 HG01169.hp1 HG01243.hp1 others(7): Show HG01167.hp1 HG01169.hp1 HG01243.hp1 HG02615.hp1 HG02615.hp2 HG02723.hp2 HG02818.hp2 HG02886.hp1 NA20300.hp1 NA21309.hp2	synonymous_variant	LOW	c.1917G>T c.1917G>T	p.Gly639Gly p.Gly639Gly	SHROOM1	ENSG00000164403.15	transcript	ENST00000378679.8	protein_coding	8/10	2471/3768	1917/2559	639/852	chr5	132823659
chr5:132823701	G G	A A	3	a0001c0003 a0011c0014 a0012c0015 a0001c0003 a0011c0014 a0012c0015	43	HG00423.hp2 HG00642.hp1 HG00673.hp2 others(40): Show HG00423.hp2 HG00642.hp1 HG00673.hp2 HG01069.hp2 HG01071.hp2 HG01358.hp2 HG02015.hp2 HG02055.hp2 HG02132.hp1 HG02135.hp1 HG02155.hp1 HG02258.hp2 HG02559.hp1 HG02572.hp1 HG02717.hp2 HG02818.hp1 HG02895.hp2 HG02897.hp1 HG02970.hp2 HG02976.hp2 HG03041.hp2 HG03098.hp2 HG03195.hp2 HG03516.hp1 HG03579.hp2 NA18906.hp1 NA18942.hp2 NA18956.hp2 NA18978.hp1 NA18982.hp2 NA18991.hp2 NA18992.hp1 NA19030.hp2 NA19064.hp1 NA19065.hp1 NA19067.hp2 NA19068.hp1 NA19072.hp2 NA19077.hp2 NA19082.hp2 NA20129.hp1 NA20129.hp2 NA21309.hp1	synonymous_variant	LOW	c.1875C>T c.1875C>T	p.Asn625Asn p.Asn625Asn	SHROOM1	ENSG00000164403.15	transcript	ENST00000378679.8	protein_coding	8/10	2429/3768	1875/2559	625/852	chr5	132823701
chr5:132824365	C C	T T	1	a0002c0002 a0002c0002	53	HG00099.hp2 HG00323.hp1 HG00544.hp1 others(50): Show HG00099.hp2 HG00323.hp1 HG00544.hp1 HG00621.hp2 HG01255.hp1 HG01256.hp2 HG01257.hp2 HG01358.hp1 HG01361.hp1 HG01496.hp1 HG01516.hp2 HG01517.hp1 HG01993.hp2 HG02083.hp2 HG02129.hp1 HG02129.hp2 HG02451.hp2 HG02486.hp2 HG02523.hp2 HG02630.hp2 HG02735.hp1 HG02970.hp1 HG03239.hp1 HG03491.hp2 HG03654.hp1 HG03669.hp1 HG03710.hp2 HG03834.hp2 HG04184.hp1 NA18939.hp1 NA18942.hp1 NA18953.hp1 NA18956.hp1 NA18960.hp2 NA18968.hp1 NA18977.hp2 NA18980.hp2 NA18982.hp1 NA18983.hp1 NA18994.hp1 NA18995.hp2 NA18997.hp1 NA18998.hp2 NA19010.hp1 NA19012.hp1 NA19057.hp2 NA19063.hp1 NA19076.hp1 NA19079.hp2 NA19082.hp1 NA19084.hp1 NA19085.hp1 NA19240.hp2	synonymous_variant	LOW	c.1296G>A c.1296G>A	p.Gln432Gln p.Gln432Gln	SHROOM1	ENSG00000164403.15	transcript	ENST00000378679.8	protein_coding	7/10	1850/3768	1296/2559	432/852	chr5	132824365
chr5:132825178	G G	C C	1	a0001c0017 a0001c0017	1	HG02080.hp2 HG02080.hp2	synonymous_variant	LOW	c.963C>G c.963C>G	p.Thr321Thr p.Thr321Thr	SHROOM1	ENSG00000164403.15	transcript	ENST00000378679.8	protein_coding	4/10	1517/3768	963/2559	321/852	chr5	132825178

chr:pos	ref	alt	# # of thapid:transcript level	thapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	chr	pos
chr5:132822351	C C	CT CT	14	a0001c0001t0002 a0001c0001t0016 a0001c0001t0018 others(11): Show a0001c0001t0002 a0001c0001t0016 a0001c0001t0018 a0001c0001t0022 a0001c0001t0031 a0001c0001t0032 a0001c0003t0002 a0001c0003t0020 a0004c0006t0002 a0005c0007t0002 a0006c0008t0002 a0006c0008t0029 a0008c0010t0002 a0014c0016t0024	121	HG00099.hp1 HG00140.hp1 HG00438.hp1 others(118): Show HG00099.hp1 HG00140.hp1 HG00438.hp1 HG00438.hp2 HG00597.hp2 HG00673.hp2 HG00738.hp2 HG01106.hp1 HG01106.hp2 HG01168.hp1 HG01175.hp1 HG01175.hp2 HG01192.hp1 HG01255.hp2 HG01256.hp1 HG01257.hp1 HG01261.hp2 HG01361.hp2 HG01433.hp1 HG01884.hp1 HG01884.hp2 HG01891.hp1 HG01891.hp2 HG01934.hp2 HG01943.hp1 HG01943.hp2 HG01981.hp2 HG02015.hp1 HG02055.hp1 HG02071.hp1 HG02071.hp2 HG02074.hp1 HG02074.hp2 HG02080.hp1 HG02083.hp1 HG02135.hp2 HG02258.hp2 HG02280.hp2 HG02451.hp1 HG02572.hp2 HG02647.hp2 HG02683.hp1 HG02735.hp2 HG02738.hp1 HG02738.hp2 HG02922.hp1 HG02922.hp2 HG02965.hp2 HG02970.hp2 HG03017.hp1 HG03209.hp1 HG03209.hp2 HG03225.hp2 HG03453.hp2 HG03654.hp2 HG03669.hp2 HG03688.hp1 HG03704.hp2 HG03710.hp1 HG04115.hp1 HG04115.hp2 HG04184.hp2 HG04204.hp1 HG04204.hp2 HG04228.hp1 HG04228.hp2 HG06807.hp2 NA18612.hp1 NA18612.hp2 NA18906.hp1 NA18941.hp2 NA18946.hp1 NA18946.hp2 NA18951.hp1 NA18951.hp2 NA18952.hp1 NA18952.hp2 NA18955.hp1 NA18955.hp2 NA18956.hp2 NA18962.hp1 NA18962.hp2 NA18963.hp2 NA18964.hp1 NA18964.hp2 NA18970.hp1 NA18970.hp2 NA18971.hp1 NA18978.hp1 NA18979.hp2 NA18980.hp1 NA18981.hp2 NA18990.hp1 NA18990.hp2 NA18992.hp1 NA18993.hp1 NA18993.hp2 NA18995.hp1 NA19000.hp1 NA19000.hp2 NA19007.hp1 NA19007.hp2 NA19011.hp1 NA19011.hp2 NA19055.hp1 NA19055.hp2 NA19056.hp1 NA19056.hp2 NA19057.hp1 NA19064.hp1 NA19064.hp2 NA19065.hp2 NA19066.hp1 NA19077.hp1 NA19084.hp2 NA19085.hp2 NA19088.hp2 NA19091.hp2 NA20300.hp2 NA20752.hp1 homoSapiens_chm13v2.hp1	3_prime_UTR_variant	MODIFIER	c.444dupA c.444dupA	SHROOM1	ENSG00000164403.15	transcript	ENST00000378679.8	protein_coding	10/10	444	chr5	132822351
chr5:132822351	C C	CTT CTT	5	a0001c0001t0003 a0001c0003t0003 a0004c0006t0003 others(2): Show a0001c0001t0003 a0001c0003t0003 a0004c0006t0003 a0009c0011t0003 a0012c0015t0003	36	HG00558.hp2 HG00639.hp1 HG00738.hp1 others(33): Show HG00558.hp2 HG00639.hp1 HG00738.hp1 HG01069.hp1 HG01346.hp1 HG01516.hp1 HG01978.hp2 HG02027.hp1 HG02027.hp2 HG02559.hp2 HG02572.hp1 HG02630.hp1 HG02976.hp1 HG03139.hp1 HG03453.hp1 HG03491.hp1 HG03540.hp1 HG03688.hp2 HG03834.hp1 NA18959.hp2 NA18966.hp1 NA18966.hp2 NA18969.hp2 NA18973.hp1 NA18975.hp2 NA18981.hp1 NA18991.hp2 NA18994.hp2 NA18998.hp1 NA19030.hp2 NA19066.hp2 NA19067.hp1 NA19079.hp1 NA19080.hp2 NA19090.hp1 NA19240.hp1	3_prime_UTR_variant	MODIFIER	c.443_444dupAA c.443_444dupAA	SHROOM1	ENSG00000164403.15	transcript	ENST00000378679.8	protein_coding	10/10	444	chr5	132822351
chr5:132822351	C C	CTTT CTTT	1	a0001c0001t0005 a0001c0001t0005	17	HG00639.hp2 HG01168.hp2 HG01243.hp2 others(14): Show HG00639.hp2 HG01168.hp2 HG01243.hp2 HG01517.hp2 HG02145.hp1 HG02280.hp1 HG02622.hp1 HG02647.hp1 HG03239.hp2 HG03471.hp2 NA18522.hp1 NA18968.hp2 NA18969.hp1 NA18997.hp2 NA19058.hp1 NA19058.hp2 NA19070.hp1	3_prime_UTR_variant	MODIFIER	c.442_444dupAAA c.442_444dupAAA	SHROOM1	ENSG00000164403.15	transcript	ENST00000378679.8	protein_coding	10/10	444	chr5	132822351
chr5:132822351	C C	CTTTT CTTTT	1	a0001c0001t0013 a0001c0001t0013	6	HG01099.hp1 HG03098.hp1 HG03540.hp2 others(3): Show HG01099.hp1 HG03098.hp1 HG03540.hp2 HG06807.hp1 NA18953.hp2 NA19074.hp2	3_prime_UTR_variant	MODIFIER	c.441_444dupAAAA c.441_444dupAAAA	SHROOM1	ENSG00000164403.15	transcript	ENST00000378679.8	protein_coding	10/10	444	chr5	132822351
chr5:132822351	C C	CTTTTT CTTTTT	2	a0001c0001t0012 a0002c0002t0012 a0001c0001t0012 a0002c0002t0012	6	HG03239.hp1 HG03486.hp2 HG03710.hp2 others(3): Show HG03239.hp1 HG03486.hp2 HG03710.hp2 NA18939.hp1 NA18968.hp1 NA18982.hp1	3_prime_UTR_variant	MODIFIER	c.440_444dupAAAAA c.440_444dupAAAAA	SHROOM1	ENSG00000164403.15	transcript	ENST00000378679.8	protein_coding	10/10	444	chr5	132822351
chr5:132822351	C C	CTTTTTT CTTTTTT	1	a0002c0002t0006 a0002c0002t0006	14	HG00099.hp2 HG01257.hp2 HG01358.hp1 others(11): Show HG00099.hp2 HG01257.hp2 HG01358.hp1 HG01361.hp1 HG01496.hp1 HG02735.hp1 HG03669.hp1 NA18942.hp1 NA18983.hp1 NA18995.hp2 NA18998.hp2 NA19012.hp1 NA19063.hp1 NA19084.hp1	3_prime_UTR_variant	MODIFIER	c.439_444dupAAAAAA c.439_444dupAAAAAA	SHROOM1	ENSG00000164403.15	transcript	ENST00000378679.8	protein_coding	10/10	444	chr5	132822351
chr5:132822351	C C	CTTTTTTT CTTTTTTT	2	a0002c0002t0007 a0002c0002t0026 a0002c0002t0007 a0002c0002t0026	14	HG00544.hp1 HG01255.hp1 HG02129.hp1 others(11): Show HG00544.hp1 HG01255.hp1 HG02129.hp1 HG02129.hp2 HG02523.hp2 HG03491.hp2 HG03654.hp1 HG03834.hp2 NA18953.hp1 NA18997.hp1 NA19010.hp1 NA19079.hp2 NA19085.hp1 NA19240.hp2	3_prime_UTR_variant	MODIFIER	c.438_444dupAAAAAA others(1): Show c.438_444dupAAAAAAA	SHROOM1	ENSG00000164403.15	transcript	ENST00000378679.8	protein_coding	10/10	444	chr5	132822351
chr5:132822351	C C	CTTTTTTT others(1): Show CTTTTTTTT	1	a0002c0002t0011 a0002c0002t0011	6	HG00621.hp2 HG01517.hp1 HG01993.hp2 others(3): Show HG00621.hp2 HG01517.hp1 HG01993.hp2 HG02451.hp2 HG02486.hp2 HG04184.hp1	3_prime_UTR_variant	MODIFIER	c.437_444dupAAAAAA others(2): Show c.437_444dupAAAAAAAA	SHROOM1	ENSG00000164403.15	transcript	ENST00000378679.8	protein_coding	10/10	444	chr5	132822351
chr5:132822351	C C	CTTTTTTT others(2): Show CTTTTTTTTT	1	a0002c0002t0010 a0002c0002t0010	7	HG00323.hp1 HG01256.hp2 HG01516.hp2 others(4): Show HG00323.hp1 HG01256.hp2 HG01516.hp2 HG02083.hp2 HG02630.hp2 HG02970.hp1 NA18960.hp2	3_prime_UTR_variant	MODIFIER	c.436_444dupAAAAAA others(3): Show c.436_444dupAAAAAAAAA	SHROOM1	ENSG00000164403.15	transcript	ENST00000378679.8	protein_coding	10/10	444	chr5	132822351
chr5:132822351	C C	CTTTTTTT others(3): Show CTTTTTTTTTT	1	a0002c0002t0015 a0002c0002t0015	4	NA18977.hp2 NA18980.hp2 NA19076.hp1 others(1): Show NA18977.hp2 NA18980.hp2 NA19076.hp1 NA19082.hp1	3_prime_UTR_variant	MODIFIER	c.435_444dupAAAAAA others(4): Show c.435_444dupAAAAAAAAAA	SHROOM1	ENSG00000164403.15	transcript	ENST00000378679.8	protein_coding	10/10	444	chr5	132822351
chr5:132822351	C C	CTTTTTTT others(4): Show CTTTTTTTTTTT	1	a0002c0002t0017 a0002c0002t0017	2	NA18956.hp1 NA18994.hp1 NA18956.hp1 NA18994.hp1	3_prime_UTR_variant	MODIFIER	c.434_444dupAAAAAA others(5): Show c.434_444dupAAAAAAAAAAA	SHROOM1	ENSG00000164403.15	transcript	ENST00000378679.8	protein_coding	10/10	444	chr5	132822351
chr5:132822351	CT CT	C C	6	a0001c0001t0004 a0001c0001t0019 a0001c0003t0004 others(3): Show a0001c0001t0004 a0001c0001t0019 a0001c0003t0004 a0001c0004t0004 a0003c0005t0004 a0007c0009t0004	23	HG00323.hp2 HG01069.hp2 HG01099.hp2 others(20): Show HG00323.hp2 HG01069.hp2 HG01099.hp2 HG01167.hp2 HG01261.hp1 HG01358.hp2 HG01934.hp1 HG01952.hp1 HG01952.hp2 HG02148.hp1 HG02809.hp1 HG02818.hp2 HG02886.hp2 HG02896.hp2 HG02897.hp1 HG02897.hp2 HG03139.hp2 HG03195.hp2 HG03225.hp1 HG03516.hp1 NA18747.hp1 NA18747.hp2 NA20752.hp2	3_prime_UTR_variant	MODIFIER	c.444delA c.444delA	SHROOM1	ENSG00000164403.15	transcript	ENST00000378679.8	protein_coding	10/10	444	chr5	132822351
chr5:132822351	CTT CTT	C C	3	a0001c0001t0008 a0001c0004t0008 a0001c0004t0027 a0001c0001t0008 a0001c0004t0008 a0001c0004t0027	11	HG01169.hp1 HG01243.hp1 HG01433.hp2 others(8): Show HG01169.hp1 HG01243.hp1 HG01433.hp2 HG01993.hp1 HG02004.hp2 HG02615.hp1 HG02615.hp2 HG02723.hp2 HG02886.hp1 NA20300.hp1 NA21309.hp2	3_prime_UTR_variant	MODIFIER	c.443_444delAA c.443_444delAA	SHROOM1	ENSG00000164403.15	transcript	ENST00000378679.8	protein_coding	10/10	443	chr5	132822351
chr5:132822386	C C	T T	1	a0001c0001t0028 a0001c0001t0028	1	HG00597.hp1 HG00597.hp1	3_prime_UTR_variant	MODIFIER	c.410G>A c.410G>A	SHROOM1	ENSG00000164403.15	transcript	ENST00000378679.8	protein_coding	10/10	410	chr5	132822386
chr5:132822403	G G	A A	1	a0006c0008t0029 a0006c0008t0029	1	HG06807.hp2 HG06807.hp2	3_prime_UTR_variant	MODIFIER	c.393C>T c.393C>T	SHROOM1	ENSG00000164403.15	transcript	ENST00000378679.8	protein_coding	10/10	393	chr5	132822403
chr5:132822516	A A	T T	2	a0001c0001t0009 a0001c0001t0016 a0001c0001t0009 a0001c0001t0016	11	HG01192.hp2 HG01934.hp2 HG01943.hp2 others(8): Show HG01192.hp2 HG01934.hp2 HG01943.hp2 HG01978.hp1 HG01981.hp2 HG02004.hp1 NA18973.hp2 NA18992.hp2 NA19072.hp1 NA19074.hp1 NA19081.hp2	3_prime_UTR_variant	MODIFIER	c.280T>A c.280T>A	SHROOM1	ENSG00000164403.15	transcript	ENST00000378679.8	protein_coding	10/10	280	chr5	132822516
chr5:132822564	C C	T T	1	a0001c0001t0023 a0001c0001t0023	1	HG00408.hp2 HG00408.hp2	3_prime_UTR_variant	MODIFIER	c.232G>A c.232G>A	SHROOM1	ENSG00000164403.15	transcript	ENST00000378679.8	protein_coding	10/10	232	chr5	132822564
chr5:132822580	G G	C C	1	a0001c0001t0018 a0001c0001t0018	2	HG00738.hp2 HG01192.hp1 HG00738.hp2 HG01192.hp1	3_prime_UTR_variant	MODIFIER	c.216C>G c.216C>G	SHROOM1	ENSG00000164403.15	transcript	ENST00000378679.8	protein_coding	10/10	216	chr5	132822580
chr5:132822595	C C	T T	1	a0001c0004t0027 a0001c0004t0027	1	HG01243.hp1 HG01243.hp1	3_prime_UTR_variant	MODIFIER	c.201G>A c.201G>A	SHROOM1	ENSG00000164403.15	transcript	ENST00000378679.8	protein_coding	10/10	201	chr5	132822595
chr5:132822657	C C	T T	1	a0002c0002t0026 a0002c0002t0026	1	HG03834.hp2 HG03834.hp2	3_prime_UTR_variant	MODIFIER	c.139G>A c.139G>A	SHROOM1	ENSG00000164403.15	transcript	ENST00000378679.8	protein_coding	10/10	139	chr5	132822657
chr5:132822682	G G	T T	1	a0001c0001t0025 a0001c0001t0025	1	NA19030.hp1 NA19030.hp1	3_prime_UTR_variant	MODIFIER	c.114C>A c.114C>A	SHROOM1	ENSG00000164403.15	transcript	ENST00000378679.8	protein_coding	10/10	114	chr5	132822682
chr5:132822689	C C	G G	1	a0014c0016t0024 a0014c0016t0024	1	HG02735.hp2 HG02735.hp2	3_prime_UTR_variant	MODIFIER	c.107G>C c.107G>C	SHROOM1	ENSG00000164403.15	transcript	ENST00000378679.8	protein_coding	10/10	107	chr5	132822689
chr5:132822752	G G	C C	1	a0002c0002t0030 a0002c0002t0030	1	NA19057.hp2 NA19057.hp2	3_prime_UTR_variant	MODIFIER	c.44C>G c.44C>G	SHROOM1	ENSG00000164403.15	transcript	ENST00000378679.8	protein_coding	10/10	44	chr5	132822752
chr5:132826440	C C	T T	1	a0001c0001t0023 a0001c0001t0023	1	HG00408.hp2 HG00408.hp2	5_prime_UTR_variant	MODIFIER	c.-206G>A c.-206G>A	SHROOM1	ENSG00000164403.15	transcript	ENST00000378679.8	protein_coding	3/10	300	chr5	132826440
chr5:132826468	A A	G G	2	a0001c0001t0014 a0001c0001t0022 a0001c0001t0014 a0001c0001t0022	6	HG00408.hp1 NA18960.hp1 NA18964.hp2 others(3): Show HG00408.hp1 NA18960.hp1 NA18964.hp2 NA19009.hp1 NA19090.hp2 NA19091.hp1	5_prime_UTR_variant	MODIFIER	c.-234T>C c.-234T>C	SHROOM1	ENSG00000164403.15	transcript	ENST00000378679.8	protein_coding	3/10	328	chr5	132826468
chr5:132827531	G G	A A	1	a0001c0001t0031 a0001c0001t0031	1	HG02965.hp2 HG02965.hp2	5_prime_UTR_variant	MODIFIER	c.-424C>T c.-424C>T	SHROOM1	ENSG00000164403.15	transcript	ENST00000378679.8	protein_coding	2/10	1391	chr5	132827531
chr5:132827573	G G	A A	1	a0001c0001t0019 a0001c0001t0019	2	HG01099.hp2 HG01934.hp1 HG01099.hp2 HG01934.hp1	5_prime_UTR_variant	MODIFIER	c.-466C>T c.-466C>T	SHROOM1	ENSG00000164403.15	transcript	ENST00000378679.8	protein_coding	2/10	1433	chr5	132827573
chr5:132827594	G G	A A	1	a0001c0001t0032 a0001c0001t0032	1	NA20752.hp1 NA20752.hp1	5_prime_UTR_premature_start_codon_gain_variant	LOW	c.-487C>T c.-487C>T	SHROOM1	ENSG00000164403.15	transcript	ENST00000378679.8	protein_coding	2/10		chr5	132827594
chr5:132830599	G G	A A	1	a0001c0001t0021 a0001c0001t0021	1	NA19005.hp2 NA19005.hp2	5_prime_UTR_variant	MODIFIER	c.-506C>T c.-506C>T	SHROOM1	ENSG00000164403.15	transcript	ENST00000378679.8	protein_coding	1/10	4459	chr5	132830599
chr5:132830600	C C	G G	1	a0001c0001t0021 a0001c0001t0021	1	NA19005.hp2 NA19005.hp2	5_prime_UTR_variant	MODIFIER	c.-507G>C c.-507G>C	SHROOM1	ENSG00000164403.15	transcript	ENST00000378679.8	protein_coding	1/10	4460	chr5	132830600
chr5:132830601	T T	A A	1	a0001c0001t0021 a0001c0001t0021	1	NA19005.hp2 NA19005.hp2	5_prime_UTR_variant	MODIFIER	c.-508A>T c.-508A>T	SHROOM1	ENSG00000164403.15	transcript	ENST00000378679.8	protein_coding	1/10	4461	chr5	132830601
chr5:132830602	C C	T T	1	a0001c0001t0021 a0001c0001t0021	1	NA19005.hp2 NA19005.hp2	5_prime_UTR_variant	MODIFIER	c.-509G>A c.-509G>A	SHROOM1	ENSG00000164403.15	transcript	ENST00000378679.8	protein_coding	1/10	4462	chr5	132830602
chr5:132830647	C C	G G	1	a0001c0003t0020 a0001c0003t0020	1	NA18956.hp2 NA18956.hp2	5_prime_UTR_variant	MODIFIER	c.-554G>C c.-554G>C	SHROOM1	ENSG00000164403.15	transcript	ENST00000378679.8	protein_coding	1/10	4507	chr5	132830647

chr:pos	ref	alt	# # of ghapid:genebody level	ghapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	genename	geneid	featuretype	featureid	genebody_biotype	rank	chr	pos
chr5:132823772	CA CA	C C	3	a0001c0001t0001g0101 a0001c0001t0002g0089 a0001c0001t0002g0100 a0001c0001t0001g0101 a0001c0001t0002g0089 a0001c0001t0002g0100	3	HG02071.hp2 HG02135.hp2 HG02165.hp2 HG02071.hp2 HG02135.hp2 HG02165.hp2	intron_variant	MODIFIER	c.1812-9delT c.1812-9delT	SHROOM1	ENSG00000164403.15	transcript	ENST00000378679.8	protein_coding	7/9	chr5	132823772
chr5:132823828	T T	A A	57	a0001c0001t0002g0031 a0001c0001t0002g0032 a0001c0001t0003g0059 others(54): Show a0001c0001t0002g0031 a0001c0001t0002g0032 a0001c0001t0003g0059 a0001c0001t0003g0064 a0001c0001t0005g0020 a0001c0001t0005g0063 a0001c0001t0012g0062 a0001c0001t0013g0058 a0001c0001t0031g0057 a0001c0003t0001g0005 a0001c0003t0001g0012 a0001c0003t0001g0015 a0001c0003t0001g0120 a0001c0003t0001g0121 a0001c0003t0002g0010 a0001c0003t0002g0119 a0001c0003t0003g0051 a0001c0003t0004g0028 a0001c0003t0004g0052 a0001c0003t0020g0010 a0001c0004t0001g0113 a0001c0004t0004g0115 a0001c0004t0008g0027 a0001c0004t0008g0050 a0001c0004t0008g0065 a0001c0004t0008g0066 a0001c0004t0027g0114 a0002c0002t0006g0009 a0002c0002t0006g0029 a0002c0002t0006g0034 a0002c0002t0006g0049 a0002c0002t0006g0071 a0002c0002t0007g0013 a0002c0002t0007g0021 a0002c0002t0007g0037 a0002c0002t0007g0055 a0002c0002t0007g0070 a0002c0002t0007g0078 a0002c0002t0010g0035 a0002c0002t0010g0048 a0002c0002t0010g0056 a0002c0002t0010g0072 a0002c0002t0010g0075 a0002c0002t0011g0036 a0002c0002t0011g0054 a0002c0002t0011g0073 a0002c0002t0011g0076 a0002c0002t0011g0111 a0002c0002t0012g0030 a0002c0002t0012g0038 a0002c0002t0012g0069 a0002c0002t0015g0016 a0002c0002t0017g0033 a0002c0002t0026g0074 a0002c0002t0030g0077 a0011c0014t0001g0117 a0012c0015t0003g0118	119	HG00099.hp2 HG00323.hp1 HG00423.hp2 others(116): Show HG00099.hp2 HG00323.hp1 HG00423.hp2 HG00544.hp1 HG00621.hp2 HG00639.hp1 HG00642.hp1 HG00673.hp2 HG01069.hp2 HG01071.hp2 HG01167.hp1 HG01169.hp1 HG01243.hp1 HG01243.hp2 HG01255.hp1 HG01256.hp2 HG01257.hp2 HG01358.hp1 HG01358.hp2 HG01361.hp1 HG01496.hp1 HG01516.hp2 HG01517.hp1 HG01993.hp2 HG02015.hp2 HG02055.hp1 HG02055.hp2 HG02083.hp2 HG02129.hp1 HG02129.hp2 HG02132.hp1 HG02135.hp1 HG02155.hp1 HG02258.hp2 HG02280.hp1 HG02451.hp2 HG02486.hp2 HG02523.hp2 HG02559.hp1 HG02572.hp1 HG02615.hp1 HG02615.hp2 HG02630.hp2 HG02647.hp1 HG02717.hp2 HG02723.hp2 HG02735.hp1 HG02818.hp1 HG02818.hp2 HG02886.hp1 HG02895.hp2 HG02897.hp1 HG02922.hp1 HG02922.hp2 HG02965.hp2 HG02970.hp1 HG02970.hp2 HG02976.hp2 HG03041.hp2 HG03098.hp1 HG03098.hp2 HG03195.hp2 HG03209.hp1 HG03239.hp1 HG03471.hp2 HG03486.hp2 HG03491.hp2 HG03516.hp1 HG03579.hp2 HG03654.hp1 HG03669.hp1 HG03710.hp2 HG03834.hp2 HG04184.hp1 NA18906.hp1 NA18939.hp1 NA18942.hp1 NA18942.hp2 NA18953.hp1 NA18956.hp1 NA18956.hp2 NA18960.hp2 NA18968.hp1 NA18977.hp2 NA18978.hp1 NA18980.hp2 NA18982.hp1 NA18982.hp2 NA18983.hp1 NA18991.hp2 NA18992.hp1 NA18994.hp1 NA18995.hp2 NA18997.hp1 NA18998.hp2 NA19010.hp1 NA19012.hp1 NA19030.hp2 NA19057.hp2 NA19063.hp1 NA19064.hp1 NA19065.hp1 NA19067.hp2 NA19068.hp1 NA19072.hp2 NA19076.hp1 NA19077.hp2 NA19079.hp2 NA19082.hp1 NA19082.hp2 NA19084.hp1 NA19085.hp1 NA19240.hp1 NA19240.hp2 NA20129.hp1 NA20129.hp2 NA20300.hp1 NA21309.hp1 NA21309.hp2	intron_variant	MODIFIER	c.1811+22A>T c.1811+22A>T	SHROOM1	ENSG00000164403.15	transcript	ENST00000378679.8	protein_coding	7/9	chr5	132823828
chr5:132824441	A A	G G	1	a0001c0001t0001g0098 a0001c0001t0001g0098	1	NA19043.hp1 NA19043.hp1	intron_variant	MODIFIER	c.1242-22T>C c.1242-22T>C	SHROOM1	ENSG00000164403.15	transcript	ENST00000378679.8	protein_coding	6/9	chr5	132824441
chr5:132824592	G G	A A	1	a0001c0004t0008g0066 a0001c0004t0008g0066	1	HG02615.hp2 HG02615.hp2	intron_variant	MODIFIER	c.1241+23C>T c.1241+23C>T	SHROOM1	ENSG00000164403.15	transcript	ENST00000378679.8	protein_coding	6/9	chr5	132824592
chr5:132824960	C C	G G	2	a0001c0004t0001g0113 a0001c0004t0008g0050 a0001c0004t0001g0113 a0001c0004t0008g0050	3	HG01167.hp1 HG01169.hp1 NA21309.hp2 HG01167.hp1 HG01169.hp1 NA21309.hp2	intron_variant	MODIFIER	c.1034+58G>C c.1034+58G>C	SHROOM1	ENSG00000164403.15	transcript	ENST00000378679.8	protein_coding	5/9	chr5	132824960
chr5:132826197	A A	T T	12	a0002c0002t0006g0034 a0002c0002t0006g0049 a0002c0002t0006g0071 others(9): Show a0002c0002t0006g0034 a0002c0002t0006g0049 a0002c0002t0006g0071 a0002c0002t0007g0013 a0002c0002t0007g0070 a0002c0002t0010g0075 a0002c0002t0011g0076 a0002c0002t0012g0069 a0002c0002t0015g0016 a0002c0002t0017g0033 a0002c0002t0026g0074 a0002c0002t0030g0077	22	HG00544.hp1 HG02129.hp1 HG02129.hp2 others(19): Show HG00544.hp1 HG02129.hp1 HG02129.hp2 HG03834.hp2 HG04184.hp1 NA18942.hp1 NA18953.hp1 NA18956.hp1 NA18960.hp2 NA18977.hp2 NA18980.hp2 NA18982.hp1 NA18983.hp1 NA18994.hp1 NA18995.hp2 NA18997.hp1 NA18998.hp2 NA19012.hp1 NA19057.hp2 NA19076.hp1 NA19079.hp2 NA19082.hp1	intron_variant	MODIFIER	c.-42-15T>A c.-42-15T>A	SHROOM1	ENSG00000164403.15	transcript	ENST00000378679.8	protein_coding	3/9	chr5	132826197
chr5:132826899	T T	C C	2	a0001c0001t0005g0106 a0001c0001t0013g0105 a0001c0001t0005g0106 a0001c0001t0013g0105	2	HG01099.hp1 HG01168.hp2 HG01099.hp1 HG01168.hp2	intron_variant	MODIFIER	c.-353-312A>G c.-353-312A>G	SHROOM1	ENSG00000164403.15	transcript	ENST00000378679.8	protein_coding	2/9	chr5	132826899
chr5:132826981	A A	G G	4	a0001c0001t0001g0084 a0001c0001t0002g0039 a0001c0001t0002g0061 others(1): Show a0001c0001t0001g0084 a0001c0001t0002g0039 a0001c0001t0002g0061 a0001c0001t0013g0083	5	HG01884.hp1 HG03209.hp2 HG03225.hp2 others(2): Show HG01884.hp1 HG03209.hp2 HG03225.hp2 HG03540.hp2 NA19043.hp2	intron_variant	MODIFIER	c.-353-394T>C c.-353-394T>C	SHROOM1	ENSG00000164403.15	transcript	ENST00000378679.8	protein_coding	2/9	chr5	132826981
chr5:132827084	C C	T T	9	a0001c0001t0002g0031 a0001c0001t0002g0032 a0001c0001t0003g0059 others(6): Show a0001c0001t0002g0031 a0001c0001t0002g0032 a0001c0001t0003g0059 a0001c0001t0003g0064 a0001c0001t0005g0020 a0001c0001t0005g0063 a0001c0001t0012g0062 a0001c0001t0013g0058 a0001c0001t0031g0057	13	HG00639.hp1 HG01243.hp2 HG02055.hp1 others(10): Show HG00639.hp1 HG01243.hp2 HG02055.hp1 HG02280.hp1 HG02647.hp1 HG02922.hp1 HG02922.hp2 HG02965.hp2 HG03098.hp1 HG03209.hp1 HG03471.hp2 HG03486.hp2 NA19240.hp1	intron_variant	MODIFIER	c.-354+377G>A c.-354+377G>A	SHROOM1	ENSG00000164403.15	transcript	ENST00000378679.8	protein_coding	2/9	chr5	132827084
chr5:132827140	A A	C C	1	a0001c0001t0002g0109 a0001c0001t0002g0109	1	HG00438.hp2 HG00438.hp2	intron_variant	MODIFIER	c.-354+321T>G c.-354+321T>G	SHROOM1	ENSG00000164403.15	transcript	ENST00000378679.8	protein_coding	2/9	chr5	132827140
chr5:132827210	T T	G G	1	a0001c0001t0003g0068 a0001c0001t0003g0068	1	HG02027.hp2 HG02027.hp2	intron_variant	MODIFIER	c.-354+251A>C c.-354+251A>C	SHROOM1	ENSG00000164403.15	transcript	ENST00000378679.8	protein_coding	2/9	chr5	132827210
chr5:132827228	T T	C C	1	a0001c0001t0001g0095 a0001c0001t0001g0095	1	NA18985.hp1 NA18985.hp1	intron_variant	MODIFIER	c.-354+233A>G c.-354+233A>G	SHROOM1	ENSG00000164403.15	transcript	ENST00000378679.8	protein_coding	2/9	chr5	132827228
chr5:132827279	G G	A A	1	a0008c0010t0002g0107 a0008c0010t0002g0107	1	HG03017.hp1 HG03017.hp1	intron_variant	MODIFIER	c.-354+182C>T c.-354+182C>T	SHROOM1	ENSG00000164403.15	transcript	ENST00000378679.8	protein_coding	2/9	chr5	132827279
chr5:132827355	G G	A A	1	a0002c0002t0007g0078 a0002c0002t0007g0078	1	HG03491.hp2 HG03491.hp2	intron_variant	MODIFIER	c.-354+106C>T c.-354+106C>T	SHROOM1	ENSG00000164403.15	transcript	ENST00000378679.8	protein_coding	2/9	chr5	132827355
chr5:132827433	C C	G G	3	a0001c0001t0003g0097 a0001c0001t0005g0042 a0001c0001t0013g0096 a0001c0001t0003g0097 a0001c0001t0005g0042 a0001c0001t0013g0096	4	NA18953.hp2 NA18966.hp1 NA18969.hp1 others(1): Show NA18953.hp2 NA18966.hp1 NA18969.hp1 NA19058.hp1	intron_variant	MODIFIER	c.-354+28G>C c.-354+28G>C	SHROOM1	ENSG00000164403.15	transcript	ENST00000378679.8	protein_coding	2/9	chr5	132827433
chr5:132827613	T T	TCAAAA TCAAAA	37	a0001c0001t0001g0007 a0001c0001t0001g0098 a0001c0001t0001g0101 others(34): Show a0001c0001t0001g0007 a0001c0001t0001g0098 a0001c0001t0001g0101 a0001c0001t0002g0002 a0001c0001t0002g0100 a0001c0001t0003g0004 a0001c0001t0003g0067 a0001c0001t0003g0068 a0001c0001t0003g0080 a0001c0001t0003g0097 a0001c0001t0004g0046 a0001c0001t0005g0006 a0001c0001t0005g0042 a0001c0001t0005g0106 a0001c0001t0013g0096 a0001c0001t0013g0102 a0001c0001t0013g0105 a0001c0001t0032g0108 a0001c0003t0001g0015 a0001c0003t0004g0028 a0002c0002t0006g0029 a0002c0002t0006g0071 a0002c0002t0007g0021 a0002c0002t0007g0055 a0002c0002t0007g0070 a0002c0002t0010g0072 a0002c0002t0011g0054 a0002c0002t0011g0073 a0002c0002t0012g0030 a0004c0006t0002g0045 a0004c0006t0003g0044 a0005c0007t0002g0025 a0007c0009t0004g0043 a0008c0010t0002g0107 a0009c0011t0003g0099 a0013c0013t0001g0103 a0014c0016t0024g0104	136	HG00099.hp1 HG00323.hp2 HG00438.hp1 others(133): Show HG00099.hp1 HG00323.hp2 HG00438.hp1 HG00558.hp2 HG00609.hp1 HG00621.hp2 HG00639.hp2 HG00735.hp1 HG00738.hp1 HG01069.hp1 HG01070.hp1 HG01099.hp1 HG01106.hp1 HG01168.hp2 HG01255.hp2 HG01256.hp1 HG01256.hp2 HG01257.hp1 HG01261.hp2 HG01346.hp1 HG01358.hp2 HG01361.hp2 HG01433.hp1 HG01516.hp1 HG01517.hp2 HG01884.hp2 HG01891.hp1 HG01952.hp2 HG01978.hp2 HG02015.hp1 HG02027.hp1 HG02027.hp2 HG02040.hp2 HG02055.hp2 HG02083.hp1 HG02135.hp2 HG02145.hp1 HG02148.hp2 HG02165.hp2 HG02451.hp1 HG02486.hp2 HG02622.hp1 HG02683.hp1 HG02717.hp1 HG02735.hp2 HG02738.hp1 HG02818.hp1 HG02896.hp1 HG02896.hp2 HG02897.hp2 HG02976.hp2 HG03017.hp1 HG03098.hp2 HG03195.hp2 HG03239.hp2 HG03453.hp2 HG03491.hp1 HG03516.hp1 HG03516.hp2 HG03540.hp1 HG03654.hp1 HG03654.hp2 HG03669.hp2 HG03688.hp2 HG03704.hp2 HG03710.hp1 HG03834.hp1 HG04115.hp2 HG04184.hp2 HG04204.hp1 HG04228.hp2 HG06807.hp1 NA18522.hp1 NA18939.hp1 NA18941.hp2 NA18946.hp2 NA18951.hp1 NA18952.hp1 NA18953.hp2 NA18955.hp2 NA18957.hp1 NA18959.hp2 NA18962.hp1 NA18963.hp2 NA18964.hp1 NA18966.hp1 NA18966.hp2 NA18968.hp1 NA18968.hp2 NA18969.hp1 NA18969.hp2 NA18970.hp2 NA18971.hp1 NA18973.hp1 NA18975.hp2 NA18979.hp2 NA18980.hp1 NA18981.hp1 NA18981.hp2 NA18990.hp1 NA18993.hp1 NA18997.hp2 NA18998.hp1 NA19000.hp2 NA19007.hp1 NA19010.hp1 NA19011.hp1 NA19011.hp2 NA19012.hp1 NA19043.hp1 NA19056.hp2 NA19057.hp1 NA19058.hp1 NA19058.hp2 NA19063.hp1 NA19064.hp2 NA19065.hp2 NA19066.hp1 NA19066.hp2 NA19067.hp1 NA19077.hp1 NA19079.hp1 NA19079.hp2 NA19080.hp2 NA19081.hp1 NA19084.hp1 NA19084.hp2 NA19085.hp1 NA19085.hp2 NA19088.hp2 NA19090.hp1 NA19091.hp2 NA19240.hp2 NA20129.hp1 NA20752.hp1 homoSapiens_chm13v2.hp1	splice_region_variant&intron_variant	LOW	c.-500-11_-500-7dupT others(4): Show c.-500-11_-500-7dupTTTTG	SHROOM1	ENSG00000164403.15	transcript	ENST00000378679.8	protein_coding	1/9	chr5	132827613
chr5:132827613	T T	TCAAAACA others(3): Show TCAAAACAAAA	20	a0001c0001t0002g0109 a0001c0001t0013g0110 a0002c0002t0006g0009 others(17): Show a0001c0001t0002g0109 a0001c0001t0013g0110 a0002c0002t0006g0009 a0002c0002t0006g0034 a0002c0002t0006g0049 a0002c0002t0007g0013 a0002c0002t0007g0037 a0002c0002t0007g0078 a0002c0002t0010g0035 a0002c0002t0010g0048 a0002c0002t0010g0056 a0002c0002t0010g0075 a0002c0002t0011g0036 a0002c0002t0011g0076 a0002c0002t0011g0111 a0002c0002t0012g0038 a0002c0002t0015g0016 a0002c0002t0017g0033 a0002c0002t0026g0074 a0002c0002t0030g0077	41	HG00099.hp2 HG00323.hp1 HG00438.hp2 others(38): Show HG00099.hp2 HG00323.hp1 HG00438.hp2 HG00544.hp1 HG01255.hp1 HG01257.hp2 HG01358.hp1 HG01361.hp1 HG01496.hp1 HG01516.hp2 HG01517.hp1 HG01993.hp2 HG02083.hp2 HG02129.hp1 HG02129.hp2 HG02451.hp2 HG02523.hp2 HG02630.hp2 HG02735.hp1 HG02970.hp1 HG03239.hp1 HG03491.hp2 HG03669.hp1 HG03710.hp2 HG03834.hp2 HG04184.hp1 NA18942.hp1 NA18953.hp1 NA18956.hp1 NA18960.hp2 NA18977.hp2 NA18980.hp2 NA18983.hp1 NA18994.hp1 NA18995.hp2 NA18997.hp1 NA18998.hp2 NA19057.hp2 NA19074.hp2 NA19076.hp1 NA19082.hp1	splice_region_variant&intron_variant	LOW	c.-500-16_-500-7dupT others(9): Show c.-500-16_-500-7dupTTTTGTTTTG	SHROOM1	ENSG00000164403.15	transcript	ENST00000378679.8	protein_coding	1/9	chr5	132827613
chr5:132827613	TCAAAA TCAAAA	T T	25	a0001c0001t0002g0031 a0001c0001t0002g0032 a0001c0001t0003g0059 others(22): Show a0001c0001t0002g0031 a0001c0001t0002g0032 a0001c0001t0003g0059 a0001c0001t0003g0064 a0001c0001t0004g0022 a0001c0001t0005g0020 a0001c0001t0005g0063 a0001c0001t0008g0023 a0001c0001t0012g0062 a0001c0001t0013g0058 a0001c0001t0031g0057 a0001c0003t0001g0005 a0001c0003t0002g0010 a0001c0003t0020g0010 a0001c0004t0001g0113 a0001c0004t0004g0115 a0001c0004t0008g0027 a0001c0004t0008g0050 a0001c0004t0008g0065 a0001c0004t0008g0066 a0001c0004t0027g0114 a0006c0008t0002g0081 a0006c0008t0029g0082 a0011c0014t0001g0117 a0012c0015t0003g0118	53	HG00140.hp1 HG00423.hp2 HG00639.hp1 others(50): Show HG00140.hp1 HG00423.hp2 HG00639.hp1 HG00673.hp2 HG01167.hp1 HG01169.hp1 HG01243.hp1 HG01243.hp2 HG01261.hp1 HG01433.hp2 HG01952.hp1 HG01993.hp1 HG02004.hp2 HG02015.hp2 HG02055.hp1 HG02132.hp1 HG02135.hp1 HG02148.hp1 HG02155.hp1 HG02258.hp2 HG02280.hp1 HG02615.hp1 HG02615.hp2 HG02647.hp1 HG02723.hp2 HG02818.hp2 HG02886.hp1 HG02922.hp1 HG02922.hp2 HG02965.hp2 HG03098.hp1 HG03209.hp1 HG03471.hp2 HG03486.hp2 HG06807.hp2 NA18906.hp1 NA18942.hp2 NA18956.hp2 NA18978.hp1 NA18982.hp2 NA18991.hp2 NA18992.hp1 NA19064.hp1 NA19065.hp1 NA19067.hp2 NA19068.hp1 NA19072.hp2 NA19077.hp2 NA19082.hp2 NA19240.hp1 NA20300.hp1 NA21309.hp1 NA21309.hp2	splice_region_variant&intron_variant	LOW	c.-500-11_-500-7delT others(4): Show c.-500-11_-500-7delTTTTG	SHROOM1	ENSG00000164403.15	transcript	ENST00000378679.8	protein_coding	1/9	chr5	132827613
chr5:132827855	G G	A A	3	a0001c0001t0001g0019 a0001c0001t0001g0026 a0001c0001t0002g0047 a0001c0001t0001g0019 a0001c0001t0001g0026 a0001c0001t0002g0047	9	HG01496.hp2 HG01891.hp2 HG02647.hp2 others(6): Show HG01496.hp2 HG01891.hp2 HG02647.hp2 HG02723.hp1 HG02809.hp2 HG03041.hp1 HG03195.hp1 HG03486.hp1 HG03579.hp1	intron_variant	MODIFIER	c.-500-248C>T c.-500-248C>T	SHROOM1	ENSG00000164403.15	transcript	ENST00000378679.8	protein_coding	1/9	chr5	132827855
chr5:132828277	A A	G G	1	a0001c0001t0001g0026 a0001c0001t0001g0026	3	HG02723.hp1 HG02809.hp2 HG03486.hp1 HG02723.hp1 HG02809.hp2 HG03486.hp1	intron_variant	MODIFIER	c.-500-670T>C c.-500-670T>C	SHROOM1	ENSG00000164403.15	transcript	ENST00000378679.8	protein_coding	1/9	chr5	132828277
chr5:132828480	C C	T T	2	a0001c0001t0002g0079 a0001c0001t0003g0080 a0001c0001t0002g0079 a0001c0001t0003g0080	2	HG03688.hp2 NA18952.hp2 HG03688.hp2 NA18952.hp2	intron_variant	MODIFIER	c.-500-873G>A c.-500-873G>A	SHROOM1	ENSG00000164403.15	transcript	ENST00000378679.8	protein_coding	1/9	chr5	132828480
chr5:132828621	C C	T T	28	a0002c0002t0006g0009 a0002c0002t0006g0029 a0002c0002t0006g0034 others(25): Show a0002c0002t0006g0009 a0002c0002t0006g0029 a0002c0002t0006g0034 a0002c0002t0006g0049 a0002c0002t0006g0071 a0002c0002t0007g0013 a0002c0002t0007g0021 a0002c0002t0007g0037 a0002c0002t0007g0055 a0002c0002t0007g0070 a0002c0002t0007g0078 a0002c0002t0010g0035 a0002c0002t0010g0048 a0002c0002t0010g0056 a0002c0002t0010g0072 a0002c0002t0010g0075 a0002c0002t0011g0036 a0002c0002t0011g0054 a0002c0002t0011g0073 a0002c0002t0011g0076 a0002c0002t0011g0111 a0002c0002t0012g0030 a0002c0002t0012g0038 a0002c0002t0012g0069 a0002c0002t0015g0016 a0002c0002t0017g0033 a0002c0002t0026g0074 a0002c0002t0030g0077	53	HG00099.hp2 HG00323.hp1 HG00544.hp1 others(50): Show HG00099.hp2 HG00323.hp1 HG00544.hp1 HG00621.hp2 HG01255.hp1 HG01256.hp2 HG01257.hp2 HG01358.hp1 HG01361.hp1 HG01496.hp1 HG01516.hp2 HG01517.hp1 HG01993.hp2 HG02083.hp2 HG02129.hp1 HG02129.hp2 HG02451.hp2 HG02486.hp2 HG02523.hp2 HG02630.hp2 HG02735.hp1 HG02970.hp1 HG03239.hp1 HG03491.hp2 HG03654.hp1 HG03669.hp1 HG03710.hp2 HG03834.hp2 HG04184.hp1 NA18939.hp1 NA18942.hp1 NA18953.hp1 NA18956.hp1 NA18960.hp2 NA18968.hp1 NA18977.hp2 NA18980.hp2 NA18982.hp1 NA18983.hp1 NA18994.hp1 NA18995.hp2 NA18997.hp1 NA18998.hp2 NA19010.hp1 NA19012.hp1 NA19057.hp2 NA19063.hp1 NA19076.hp1 NA19079.hp2 NA19082.hp1 NA19084.hp1 NA19085.hp1 NA19240.hp2	intron_variant	MODIFIER	c.-500-1014G>A c.-500-1014G>A	SHROOM1	ENSG00000164403.15	transcript	ENST00000378679.8	protein_coding	1/9	chr5	132828621
chr5:132828752	ATG ATG	A A	5	a0001c0001t0002g0031 a0001c0001t0003g0064 a0001c0001t0005g0063 others(2): Show a0001c0001t0002g0031 a0001c0001t0003g0064 a0001c0001t0005g0063 a0001c0001t0012g0062 a0001c0001t0031g0057	6	HG00639.hp1 HG02922.hp1 HG02965.hp2 others(3): Show HG00639.hp1 HG02922.hp1 HG02965.hp2 HG03209.hp1 HG03471.hp2 HG03486.hp2	intron_variant	MODIFIER	c.-500-1147_-500-114 others(6): Show c.-500-1147_-500-1146delCA	SHROOM1	ENSG00000164403.15	transcript	ENST00000378679.8	protein_coding	1/9	chr5	132828752
chr5:132829153	G G	A A	7	a0001c0004t0001g0113 a0001c0004t0004g0115 a0001c0004t0008g0027 others(4): Show a0001c0004t0001g0113 a0001c0004t0004g0115 a0001c0004t0008g0027 a0001c0004t0008g0050 a0001c0004t0008g0065 a0001c0004t0008g0066 a0001c0004t0027g0114	10	HG01167.hp1 HG01169.hp1 HG01243.hp1 others(7): Show HG01167.hp1 HG01169.hp1 HG01243.hp1 HG02615.hp1 HG02615.hp2 HG02723.hp2 HG02818.hp2 HG02886.hp1 NA20300.hp1 NA21309.hp2	intron_variant	MODIFIER	c.-501+1441C>T c.-501+1441C>T	SHROOM1	ENSG00000164403.15	transcript	ENST00000378679.8	protein_coding	1/9	chr5	132829153
chr5:132829247	C C	T T	1	a0001c0001t0003g0068 a0001c0001t0003g0068	1	HG02027.hp2 HG02027.hp2	intron_variant	MODIFIER	c.-501+1347G>A c.-501+1347G>A	SHROOM1	ENSG00000164403.15	transcript	ENST00000378679.8	protein_coding	1/9	chr5	132829247
chr5:132829310	G G	A A	2	a0002c0002t0010g0048 a0002c0002t0011g0111 a0002c0002t0010g0048 a0002c0002t0011g0111	3	HG02451.hp2 HG02630.hp2 HG02970.hp1 HG02451.hp2 HG02630.hp2 HG02970.hp1	intron_variant	MODIFIER	c.-501+1284C>T c.-501+1284C>T	SHROOM1	ENSG00000164403.15	transcript	ENST00000378679.8	protein_coding	1/9	chr5	132829310
chr5:132829316	G G	GGGCTGAG others(30): Show GGGCTGAGGAATTGTCAAGGGGGCCAGTGCTCCTTCTT	1	a0001c0003t0001g0121 a0001c0003t0001g0121	1	HG02559.hp1 HG02559.hp1	intron_variant	MODIFIER	c.-501+1277_-501+127 others(41): Show c.-501+1277_-501+1278insAAGAAGGAGCACTGGCCCCCTTGACA ATTCCTCAGCC	SHROOM1	ENSG00000164403.15	transcript	ENST00000378679.8	protein_coding	1/9	chr5	132829316
chr5:132829421	G G	A A	1	a0001c0003t0001g0121 a0001c0003t0001g0121	1	HG02559.hp1 HG02559.hp1	intron_variant	MODIFIER	c.-501+1173C>T c.-501+1173C>T	SHROOM1	ENSG00000164403.15	transcript	ENST00000378679.8	protein_coding	1/9	chr5	132829421
chr5:132829422	A A	G G	1	a0001c0003t0001g0121 a0001c0003t0001g0121	1	HG02559.hp1 HG02559.hp1	intron_variant	MODIFIER	c.-501+1172T>C c.-501+1172T>C	SHROOM1	ENSG00000164403.15	transcript	ENST00000378679.8	protein_coding	1/9	chr5	132829422
chr5:132829540	C C	A A	1	a0002c0002t0006g0049 a0002c0002t0006g0049	2	NA18995.hp2 NA18998.hp2 NA18995.hp2 NA18998.hp2	intron_variant	MODIFIER	c.-501+1054G>T c.-501+1054G>T	SHROOM1	ENSG00000164403.15	transcript	ENST00000378679.8	protein_coding	1/9	chr5	132829540
chr5:132829547	G G	A A	1	a0001c0001t0001g0026 a0001c0001t0001g0026	3	HG02723.hp1 HG02809.hp2 HG03486.hp1 HG02723.hp1 HG02809.hp2 HG03486.hp1	intron_variant	MODIFIER	c.-501+1047C>T c.-501+1047C>T	SHROOM1	ENSG00000164403.15	transcript	ENST00000378679.8	protein_coding	1/9	chr5	132829547
chr5:132829586	A A	G G	1	a0001c0001t0003g0067 a0001c0001t0003g0067	1	NA19079.hp1 NA19079.hp1	intron_variant	MODIFIER	c.-501+1008T>C c.-501+1008T>C	SHROOM1	ENSG00000164403.15	transcript	ENST00000378679.8	protein_coding	1/9	chr5	132829586
chr5:132829666	C C	G G	1	a0001c0003t0001g0121 a0001c0003t0001g0121	1	HG02559.hp1 HG02559.hp1	intron_variant	MODIFIER	c.-501+928G>C c.-501+928G>C	SHROOM1	ENSG00000164403.15	transcript	ENST00000378679.8	protein_coding	1/9	chr5	132829666
chr5:132829667	G G	C C	1	a0001c0003t0001g0121 a0001c0003t0001g0121	1	HG02559.hp1 HG02559.hp1	intron_variant	MODIFIER	c.-501+927C>G c.-501+927C>G	SHROOM1	ENSG00000164403.15	transcript	ENST00000378679.8	protein_coding	1/9	chr5	132829667
chr5:132829683	C C	T T	16	a0001c0001t0002g0031 a0001c0001t0002g0032 a0001c0001t0003g0059 others(13): Show a0001c0001t0002g0031 a0001c0001t0002g0032 a0001c0001t0003g0059 a0001c0001t0003g0064 a0001c0001t0005g0020 a0001c0001t0005g0063 a0001c0001t0012g0062 a0001c0001t0013g0058 a0001c0001t0031g0057 a0001c0004t0001g0113 a0001c0004t0004g0115 a0001c0004t0008g0027 a0001c0004t0008g0050 a0001c0004t0008g0065 a0001c0004t0008g0066 a0001c0004t0027g0114	23	HG00639.hp1 HG01167.hp1 HG01169.hp1 others(20): Show HG00639.hp1 HG01167.hp1 HG01169.hp1 HG01243.hp1 HG01243.hp2 HG02055.hp1 HG02280.hp1 HG02615.hp1 HG02615.hp2 HG02647.hp1 HG02723.hp2 HG02818.hp2 HG02886.hp1 HG02922.hp1 HG02922.hp2 HG02965.hp2 HG03098.hp1 HG03209.hp1 HG03471.hp2 HG03486.hp2 NA19240.hp1 NA20300.hp1 NA21309.hp2	intron_variant	MODIFIER	c.-501+911G>A c.-501+911G>A	SHROOM1	ENSG00000164403.15	transcript	ENST00000378679.8	protein_coding	1/9	chr5	132829683
chr5:132829686	G G	A A	1	a0001c0001t0001g0112 a0001c0001t0001g0112	1	HG00642.hp2 HG00642.hp2	intron_variant	MODIFIER	c.-501+908C>T c.-501+908C>T	SHROOM1	ENSG00000164403.15	transcript	ENST00000378679.8	protein_coding	1/9	chr5	132829686
chr5:132829687	G G	C C	1	a0001c0003t0001g0120 a0001c0003t0001g0120	1	HG03579.hp2 HG03579.hp2	intron_variant	MODIFIER	c.-501+907C>G c.-501+907C>G	SHROOM1	ENSG00000164403.15	transcript	ENST00000378679.8	protein_coding	1/9	chr5	132829687
chr5:132829804	G G	T T	1	a0001c0001t0002g0061 a0001c0001t0002g0061	1	HG01884.hp1 HG01884.hp1	intron_variant	MODIFIER	c.-501+790C>A c.-501+790C>A	SHROOM1	ENSG00000164403.15	transcript	ENST00000378679.8	protein_coding	1/9	chr5	132829804
chr5:132829876	C C	T T	4	a0001c0001t0002g0032 a0001c0001t0003g0059 a0001c0001t0005g0020 others(1): Show a0001c0001t0002g0032 a0001c0001t0003g0059 a0001c0001t0005g0020 a0001c0001t0013g0058	7	HG01243.hp2 HG02055.hp1 HG02280.hp1 others(4): Show HG01243.hp2 HG02055.hp1 HG02280.hp1 HG02647.hp1 HG02922.hp2 HG03098.hp1 NA19240.hp1	intron_variant	MODIFIER	c.-501+718G>A c.-501+718G>A	SHROOM1	ENSG00000164403.15	transcript	ENST00000378679.8	protein_coding	1/9	chr5	132829876
chr5:132829879	T T	A A	5	a0001c0004t0001g0113 a0001c0004t0004g0115 a0001c0004t0008g0027 others(2): Show a0001c0004t0001g0113 a0001c0004t0004g0115 a0001c0004t0008g0027 a0001c0004t0008g0050 a0001c0004t0027g0114	8	HG01167.hp1 HG01169.hp1 HG01243.hp1 others(5): Show HG01167.hp1 HG01169.hp1 HG01243.hp1 HG02615.hp1 HG02723.hp2 HG02818.hp2 HG02886.hp1 NA21309.hp2	intron_variant	MODIFIER	c.-501+715A>T c.-501+715A>T	SHROOM1	ENSG00000164403.15	transcript	ENST00000378679.8	protein_coding	1/9	chr5	132829879
chr5:132829925	G G	C C	1	a0001c0001t0001g0116 a0001c0001t0001g0116	1	NA19004.hp2 NA19004.hp2	intron_variant	MODIFIER	c.-501+669C>G c.-501+669C>G	SHROOM1	ENSG00000164403.15	transcript	ENST00000378679.8	protein_coding	1/9	chr5	132829925
chr5:132829957	C C	T T	1	a0001c0001t0002g0060 a0001c0001t0002g0060	1	NA19000.hp1 NA19000.hp1	intron_variant	MODIFIER	c.-501+637G>A c.-501+637G>A	SHROOM1	ENSG00000164403.15	transcript	ENST00000378679.8	protein_coding	1/9	chr5	132829957
chr5:132830070	G G	C C	12	a0001c0003t0001g0005 a0001c0003t0001g0012 a0001c0003t0001g0015 others(9): Show a0001c0003t0001g0005 a0001c0003t0001g0012 a0001c0003t0001g0015 a0001c0003t0001g0120 a0001c0003t0002g0010 a0001c0003t0002g0119 a0001c0003t0003g0051 a0001c0003t0004g0028 a0001c0003t0004g0052 a0001c0003t0020g0010 a0011c0014t0001g0117 a0012c0015t0003g0118	42	HG00423.hp2 HG00642.hp1 HG00673.hp2 others(39): Show HG00423.hp2 HG00642.hp1 HG00673.hp2 HG01069.hp2 HG01071.hp2 HG01358.hp2 HG02015.hp2 HG02055.hp2 HG02132.hp1 HG02135.hp1 HG02155.hp1 HG02258.hp2 HG02572.hp1 HG02717.hp2 HG02818.hp1 HG02895.hp2 HG02897.hp1 HG02970.hp2 HG02976.hp2 HG03041.hp2 HG03098.hp2 HG03195.hp2 HG03516.hp1 HG03579.hp2 NA18906.hp1 NA18942.hp2 NA18956.hp2 NA18978.hp1 NA18982.hp2 NA18991.hp2 NA18992.hp1 NA19030.hp2 NA19064.hp1 NA19065.hp1 NA19067.hp2 NA19068.hp1 NA19072.hp2 NA19077.hp2 NA19082.hp2 NA20129.hp1 NA20129.hp2 NA21309.hp1	intron_variant	MODIFIER	c.-501+524C>G c.-501+524C>G	SHROOM1	ENSG00000164403.15	transcript	ENST00000378679.8	protein_coding	1/9	chr5	132830070
chr5:132830075	G G	C C	1	a0001c0003t0001g0121 a0001c0003t0001g0121	1	HG02559.hp1 HG02559.hp1	intron_variant	MODIFIER	c.-501+519C>G c.-501+519C>G	SHROOM1	ENSG00000164403.15	transcript	ENST00000378679.8	protein_coding	1/9	chr5	132830075
chr5:132830076	C C	G G	1	a0001c0003t0001g0121 a0001c0003t0001g0121	1	HG02559.hp1 HG02559.hp1	intron_variant	MODIFIER	c.-501+518G>C c.-501+518G>C	SHROOM1	ENSG00000164403.15	transcript	ENST00000378679.8	protein_coding	1/9	chr5	132830076
chr5:132830229	C C	T T	4	a0001c0001t0002g0032 a0001c0001t0003g0059 a0001c0001t0005g0020 others(1): Show a0001c0001t0002g0032 a0001c0001t0003g0059 a0001c0001t0005g0020 a0001c0001t0013g0058	7	HG01243.hp2 HG02055.hp1 HG02280.hp1 others(4): Show HG01243.hp2 HG02055.hp1 HG02280.hp1 HG02647.hp1 HG02922.hp2 HG03098.hp1 NA19240.hp1	intron_variant	MODIFIER	c.-501+365G>A c.-501+365G>A	SHROOM1	ENSG00000164403.15	transcript	ENST00000378679.8	protein_coding	1/9	chr5	132830229
chr5:132830317	G G	C C	1	a0001c0003t0001g0121 a0001c0003t0001g0121	1	HG02559.hp1 HG02559.hp1	intron_variant	MODIFIER	c.-501+277C>G c.-501+277C>G	SHROOM1	ENSG00000164403.15	transcript	ENST00000378679.8	protein_coding	1/9	chr5	132830317
chr5:132830318	C C	G G	1	a0001c0003t0001g0121 a0001c0003t0001g0121	1	HG02559.hp1 HG02559.hp1	intron_variant	MODIFIER	c.-501+276G>C c.-501+276G>C	SHROOM1	ENSG00000164403.15	transcript	ENST00000378679.8	protein_coding	1/9	chr5	132830318
chr5:132830357	G G	T T	2	a0001c0001t0002g0031 a0001c0001t0031g0057 a0001c0001t0002g0031 a0001c0001t0031g0057	3	HG02922.hp1 HG02965.hp2 HG03209.hp1 HG02922.hp1 HG02965.hp2 HG03209.hp1	intron_variant	MODIFIER	c.-501+237C>A c.-501+237C>A	SHROOM1	ENSG00000164403.15	transcript	ENST00000378679.8	protein_coding	1/9	chr5	132830357
chr5:132830382	G G	C C	1	a0001c0003t0001g0121 a0001c0003t0001g0121	1	HG02559.hp1 HG02559.hp1	intron_variant	MODIFIER	c.-501+212C>G c.-501+212C>G	SHROOM1	ENSG00000164403.15	transcript	ENST00000378679.8	protein_coding	1/9	chr5	132830382
chr5:132830383	C C	G G	1	a0001c0003t0001g0121 a0001c0003t0001g0121	1	HG02559.hp1 HG02559.hp1	intron_variant	MODIFIER	c.-501+211G>C c.-501+211G>C	SHROOM1	ENSG00000164403.15	transcript	ENST00000378679.8	protein_coding	1/9	chr5	132830383
chr5:132830449	C C	T T	5	a0002c0002t0006g0029 a0002c0002t0007g0055 a0002c0002t0010g0056 others(2): Show a0002c0002t0006g0029 a0002c0002t0007g0055 a0002c0002t0010g0056 a0002c0002t0011g0054 a0002c0002t0012g0030	7	HG00621.hp2 HG02083.hp2 NA18939.hp1 others(4): Show HG00621.hp2 HG02083.hp2 NA18939.hp1 NA18968.hp1 NA19010.hp1 NA19063.hp1 NA19084.hp1	intron_variant	MODIFIER	c.-501+145G>A c.-501+145G>A	SHROOM1	ENSG00000164403.15	transcript	ENST00000378679.8	protein_coding	1/9	chr5	132830449
chr5:132830479	C C	G G	1	a0001c0003t0001g0121 a0001c0003t0001g0121	1	HG02559.hp1 HG02559.hp1	intron_variant	MODIFIER	c.-501+115G>C c.-501+115G>C	SHROOM1	ENSG00000164403.15	transcript	ENST00000378679.8	protein_coding	1/9	chr5	132830479
chr5:132830480	G G	C C	1	a0001c0003t0001g0121 a0001c0003t0001g0121	1	HG02559.hp1 HG02559.hp1	intron_variant	MODIFIER	c.-501+114C>G c.-501+114C>G	SHROOM1	ENSG00000164403.15	transcript	ENST00000378679.8	protein_coding	1/9	chr5	132830480
chr5:132830518	G G	T T	1	a0001c0001t0021g0053 a0001c0001t0021g0053	1	NA19005.hp2 NA19005.hp2	intron_variant	MODIFIER	c.-501+76C>A c.-501+76C>A	SHROOM1	ENSG00000164403.15	transcript	ENST00000378679.8	protein_coding	1/9	chr5	132830518
chr5:132830520	C C	T T	1	a0001c0001t0021g0053 a0001c0001t0021g0053	1	NA19005.hp2 NA19005.hp2	intron_variant	MODIFIER	c.-501+74G>A c.-501+74G>A	SHROOM1	ENSG00000164403.15	transcript	ENST00000378679.8	protein_coding	1/9	chr5	132830520
chr5:132830522	G G	T T	1	a0001c0001t0021g0053 a0001c0001t0021g0053	1	NA19005.hp2 NA19005.hp2	intron_variant	MODIFIER	c.-501+72C>A c.-501+72C>A	SHROOM1	ENSG00000164403.15	transcript	ENST00000378679.8	protein_coding	1/9	chr5	132830522
chr5:132830525	G G	A A	1	a0001c0001t0021g0053 a0001c0001t0021g0053	1	NA19005.hp2 NA19005.hp2	intron_variant	MODIFIER	c.-501+69C>T c.-501+69C>T	SHROOM1	ENSG00000164403.15	transcript	ENST00000378679.8	protein_coding	1/9	chr5	132830525
chr5:132830527	C C	A A	1	a0001c0001t0021g0053 a0001c0001t0021g0053	1	NA19005.hp2 NA19005.hp2	intron_variant	MODIFIER	c.-501+67G>T c.-501+67G>T	SHROOM1	ENSG00000164403.15	transcript	ENST00000378679.8	protein_coding	1/9	chr5	132830527
chr5:132830528	C C	A A	1	a0001c0001t0021g0053 a0001c0001t0021g0053	1	NA19005.hp2 NA19005.hp2	intron_variant	MODIFIER	c.-501+66G>T c.-501+66G>T	SHROOM1	ENSG00000164403.15	transcript	ENST00000378679.8	protein_coding	1/9	chr5	132830528
chr5:132830529	C C	G G	1	a0001c0003t0001g0121 a0001c0003t0001g0121	1	HG02559.hp1 HG02559.hp1	intron_variant	MODIFIER	c.-501+65G>C c.-501+65G>C	SHROOM1	ENSG00000164403.15	transcript	ENST00000378679.8	protein_coding	1/9	chr5	132830529
chr5:132830530	G G	A A	1	a0001c0001t0021g0053 a0001c0001t0021g0053	1	NA19005.hp2 NA19005.hp2	intron_variant	MODIFIER	c.-501+64C>T c.-501+64C>T	SHROOM1	ENSG00000164403.15	transcript	ENST00000378679.8	protein_coding	1/9	chr5	132830530
chr5:132830530	G G	C C	1	a0001c0003t0001g0121 a0001c0003t0001g0121	1	HG02559.hp1 HG02559.hp1	intron_variant	MODIFIER	c.-501+64C>G c.-501+64C>G	SHROOM1	ENSG00000164403.15	transcript	ENST00000378679.8	protein_coding	1/9	chr5	132830530
chr5:132830531	C C	A A	1	a0001c0001t0021g0053 a0001c0001t0021g0053	1	NA19005.hp2 NA19005.hp2	intron_variant	MODIFIER	c.-501+63G>T c.-501+63G>T	SHROOM1	ENSG00000164403.15	transcript	ENST00000378679.8	protein_coding	1/9	chr5	132830531
chr5:132830538	C C	A A	1	a0001c0001t0021g0053 a0001c0001t0021g0053	1	NA19005.hp2 NA19005.hp2	intron_variant	MODIFIER	c.-501+56G>T c.-501+56G>T	SHROOM1	ENSG00000164403.15	transcript	ENST00000378679.8	protein_coding	1/9	chr5	132830538
chr5:132830539	C C	A A	1	a0001c0001t0021g0053 a0001c0001t0021g0053	1	NA19005.hp2 NA19005.hp2	intron_variant	MODIFIER	c.-501+55G>T c.-501+55G>T	SHROOM1	ENSG00000164403.15	transcript	ENST00000378679.8	protein_coding	1/9	chr5	132830539
chr5:132830543	G G	A A	1	a0001c0001t0021g0053 a0001c0001t0021g0053	1	NA19005.hp2 NA19005.hp2	intron_variant	MODIFIER	c.-501+51C>T c.-501+51C>T	SHROOM1	ENSG00000164403.15	transcript	ENST00000378679.8	protein_coding	1/9	chr5	132830543
chr5:132830547	A A	G G	1	a0001c0001t0021g0053 a0001c0001t0021g0053	1	NA19005.hp2 NA19005.hp2	intron_variant	MODIFIER	c.-501+47T>C c.-501+47T>C	SHROOM1	ENSG00000164403.15	transcript	ENST00000378679.8	protein_coding	1/9	chr5	132830547
chr5:132830549	C C	A A	1	a0001c0001t0021g0053 a0001c0001t0021g0053	1	NA19005.hp2 NA19005.hp2	intron_variant	MODIFIER	c.-501+45G>T c.-501+45G>T	SHROOM1	ENSG00000164403.15	transcript	ENST00000378679.8	protein_coding	1/9	chr5	132830549
chr5:132830555	C C	A A	1	a0001c0001t0021g0053 a0001c0001t0021g0053	1	NA19005.hp2 NA19005.hp2	intron_variant	MODIFIER	c.-501+39G>T c.-501+39G>T	SHROOM1	ENSG00000164403.15	transcript	ENST00000378679.8	protein_coding	1/9	chr5	132830555
chr5:132830557	G G	A A	1	a0001c0001t0021g0053 a0001c0001t0021g0053	1	NA19005.hp2 NA19005.hp2	intron_variant	MODIFIER	c.-501+37C>T c.-501+37C>T	SHROOM1	ENSG00000164403.15	transcript	ENST00000378679.8	protein_coding	1/9	chr5	132830557
chr5:132830558	C C	G G	1	a0001c0001t0021g0053 a0001c0001t0021g0053	1	NA19005.hp2 NA19005.hp2	intron_variant	MODIFIER	c.-501+36G>C c.-501+36G>C	SHROOM1	ENSG00000164403.15	transcript	ENST00000378679.8	protein_coding	1/9	chr5	132830558
chr5:132830559	C C	A A	1	a0001c0001t0021g0053 a0001c0001t0021g0053	1	NA19005.hp2 NA19005.hp2	intron_variant	MODIFIER	c.-501+35G>T c.-501+35G>T	SHROOM1	ENSG00000164403.15	transcript	ENST00000378679.8	protein_coding	1/9	chr5	132830559
chr5:132830561	C C	A A	1	a0001c0001t0021g0053 a0001c0001t0021g0053	1	NA19005.hp2 NA19005.hp2	intron_variant	MODIFIER	c.-501+33G>T c.-501+33G>T	SHROOM1	ENSG00000164403.15	transcript	ENST00000378679.8	protein_coding	1/9	chr5	132830561
chr5:132830562	C C	G G	1	a0001c0001t0021g0053 a0001c0001t0021g0053	1	NA19005.hp2 NA19005.hp2	intron_variant	MODIFIER	c.-501+32G>C c.-501+32G>C	SHROOM1	ENSG00000164403.15	transcript	ENST00000378679.8	protein_coding	1/9	chr5	132830562
chr5:132830563	C C	A A	1	a0001c0001t0021g0053 a0001c0001t0021g0053	1	NA19005.hp2 NA19005.hp2	intron_variant	MODIFIER	c.-501+31G>T c.-501+31G>T	SHROOM1	ENSG00000164403.15	transcript	ENST00000378679.8	protein_coding	1/9	chr5	132830563
chr5:132830566	T T	A A	1	a0001c0001t0021g0053 a0001c0001t0021g0053	1	NA19005.hp2 NA19005.hp2	intron_variant	MODIFIER	c.-501+28A>T c.-501+28A>T	SHROOM1	ENSG00000164403.15	transcript	ENST00000378679.8	protein_coding	1/9	chr5	132830566
chr5:132830569	C C	T T	1	a0001c0001t0021g0053 a0001c0001t0021g0053	1	NA19005.hp2 NA19005.hp2	intron_variant	MODIFIER	c.-501+25G>A c.-501+25G>A	SHROOM1	ENSG00000164403.15	transcript	ENST00000378679.8	protein_coding	1/9	chr5	132830569
chr5:132830571	G G	T T	1	a0001c0001t0021g0053 a0001c0001t0021g0053	1	NA19005.hp2 NA19005.hp2	intron_variant	MODIFIER	c.-501+23C>A c.-501+23C>A	SHROOM1	ENSG00000164403.15	transcript	ENST00000378679.8	protein_coding	1/9	chr5	132830571
chr5:132830575	C C	A A	1	a0001c0001t0021g0053 a0001c0001t0021g0053	1	NA19005.hp2 NA19005.hp2	intron_variant	MODIFIER	c.-501+19G>T c.-501+19G>T	SHROOM1	ENSG00000164403.15	transcript	ENST00000378679.8	protein_coding	1/9	chr5	132830575
chr5:132830576	C C	A A	1	a0001c0001t0021g0053 a0001c0001t0021g0053	1	NA19005.hp2 NA19005.hp2	intron_variant	MODIFIER	c.-501+18G>T c.-501+18G>T	SHROOM1	ENSG00000164403.15	transcript	ENST00000378679.8	protein_coding	1/9	chr5	132830576
chr5:132830578	C C	A A	1	a0001c0001t0021g0053 a0001c0001t0021g0053	1	NA19005.hp2 NA19005.hp2	intron_variant	MODIFIER	c.-501+16G>T c.-501+16G>T	SHROOM1	ENSG00000164403.15	transcript	ENST00000378679.8	protein_coding	1/9	chr5	132830578
chr5:132830579	G G	A A	1	a0001c0001t0021g0053 a0001c0001t0021g0053	1	NA19005.hp2 NA19005.hp2	intron_variant	MODIFIER	c.-501+15C>T c.-501+15C>T	SHROOM1	ENSG00000164403.15	transcript	ENST00000378679.8	protein_coding	1/9	chr5	132830579
chr5:132830581	C C	A A	1	a0001c0001t0021g0053 a0001c0001t0021g0053	1	NA19005.hp2 NA19005.hp2	intron_variant	MODIFIER	c.-501+13G>T c.-501+13G>T	SHROOM1	ENSG00000164403.15	transcript	ENST00000378679.8	protein_coding	1/9	chr5	132830581
chr5:132830582	C C	A A	1	a0001c0001t0021g0053 a0001c0001t0021g0053	1	NA19005.hp2 NA19005.hp2	intron_variant	MODIFIER	c.-501+12G>T c.-501+12G>T	SHROOM1	ENSG00000164403.15	transcript	ENST00000378679.8	protein_coding	1/9	chr5	132830582
chr5:132830584	C C	A A	1	a0001c0001t0021g0053 a0001c0001t0021g0053	1	NA19005.hp2 NA19005.hp2	intron_variant	MODIFIER	c.-501+10G>T c.-501+10G>T	SHROOM1	ENSG00000164403.15	transcript	ENST00000378679.8	protein_coding	1/9	chr5	132830584
chr5:132830585	G G	A A	1	a0001c0001t0021g0053 a0001c0001t0021g0053	1	NA19005.hp2 NA19005.hp2	intron_variant	MODIFIER	c.-501+9C>T c.-501+9C>T	SHROOM1	ENSG00000164403.15	transcript	ENST00000378679.8	protein_coding	1/9	chr5	132830585
chr5:132830587	C C	G G	1	a0001c0001t0021g0053 a0001c0001t0021g0053	1	NA19005.hp2 NA19005.hp2	splice_region_variant&intron_variant	LOW	c.-501+7G>C c.-501+7G>C	SHROOM1	ENSG00000164403.15	transcript	ENST00000378679.8	protein_coding	1/9	chr5	132830587
chr5:132830589	C C	A A	1	a0001c0001t0021g0053 a0001c0001t0021g0053	1	NA19005.hp2 NA19005.hp2	splice_region_variant&intron_variant	LOW	c.-501+5G>T c.-501+5G>T	SHROOM1	ENSG00000164403.15	transcript	ENST00000378679.8	protein_coding	1/9	chr5	132830589
chr5:132830591	T T	A A	1	a0001c0001t0021g0053 a0001c0001t0021g0053	1	NA19005.hp2 NA19005.hp2	splice_region_variant&intron_variant	LOW	c.-501+3A>T c.-501+3A>T	SHROOM1	ENSG00000164403.15	transcript	ENST00000378679.8	protein_coding	1/9	chr5	132830591
chr5:132830593	C C	A A	1	a0001c0001t0021g0053 a0001c0001t0021g0053	1	NA19005.hp2 NA19005.hp2	splice_donor_variant&intron_variant	HIGH	c.-501+1G>T c.-501+1G>T	SHROOM1	ENSG00000164403.15	transcript	ENST00000378679.8	protein_coding	1/9	chr5	132830593

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🧬 JoGo Online Haplotype Explorer SHROOM1_chr5_132817141_132835647

JoGo Local Haplotype Explorer (on iGV) SHROOM1_chr5_132817141_132835647

Translation Multiple Alignment View

🧬 Gene Summary

AAmino acid(protein) Level Haplotype Info (Total: 14)

CCoding Level Haplotype Info (Total: 18)

TTranscript Level Haplotype Info (Total: 32)

GGenebody Level Haplotype Info (Total: 121)

A C AC Level (Amino Acid + Coding) Haplotype Info (Total: 18)

A C T ACT Level (Amino Acid + Coding + Transcript) Haplotype Info (Total: 55)

A C T G ACTG Level (Amino Acid + Coding + Transcript + Genebody) Haplotype Info (Total: 122)

Haplotype Details by Sample (Haploid Level) (Total: 396)

AAmino acid(protein) Level Haplotype Related Variants (Effect to Protein Coding Variants) (Total: 15)

CCoding Level Variants (Synonymous Mutations) (Total: 5)

TTranscript Level Haplotype Variants (5'UTR+3'UTR) (Total: 33)

GGenebody Level Haplotype Variants (Intron) (Total: 91)

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Annotation (Repeats)

Annotation (SNP Array)