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geneid	57463
ensemblid	ENSG00000181754.7
hgncid	20824
symbol	AMIGO1
name	adhesion molecule with Ig like domain 1
refseq_nuc	NM_020703.4
refseq_prot	NP_065754.2
ensembl_nuc	ENST00000369864.5
ensembl_prot	ENSP00000358880.4
mane_status	MANE Select
chr	chr1
start	109504178
end	109509727
strand	-
ver	v1.2
region	chr1:109504178-109509727
region5000	chr1:109499178-109514727
regionname0	AMIGO1_chr1_109504178_109509727
regionname5000	AMIGO1_chr1_109499178_109514727

ahapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	alen	total	AFR	AMR	EAS	EUR	SAS	JPT	regionname	genename	aa	chr	start	end
a0001	1/1	493	396	98	59	180	14	43	138	AMIGO1_chr1_109499178_109514727	AMIGO1	copy fasta	chr1	109499178	109514727
a0002	0/0	493	3	2	0	0	0	1	0	AMIGO1_chr1_109499178_109514727	AMIGO1	copy fasta	chr1	109499178	109514727
a0003	0/0	500	1	0	1	0	0	0	0	AMIGO1_chr1_109499178_109514727	AMIGO1	copy fasta	chr1	109499178	109514727

chapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	clen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	cseq	chr	start	end
c0001	1/1	1482	395	98	59	179	14	43	AMIGO1_chr1_109499178_109514727	AMIGO1	copy fasta	chr1	109499178	109514727
c0002	0/0	1482	3	2	0	0	0	1	AMIGO1_chr1_109499178_109514727	AMIGO1	copy fasta	chr1	109499178	109514727
c0003	0/0	1482	1	0	0	1	0	0	AMIGO1_chr1_109499178_109514727	AMIGO1	copy fasta	chr1	109499178	109514727
c0004	0/0	1503	1	0	1	0	0	0	AMIGO1_chr1_109499178_109514727	AMIGO1	copy fasta	chr1	109499178	109514727

thapid	grch38 chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	tlen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	tseq	chr	start	end
t0001	1/0	3649	132	14	28	76	4	9	AMIGO1_chr1_109499178_109514727	AMIGO1	copy fasta	chr1	109499178	109514727
t0002	0/0	3649	89	10	3	65	1	10	AMIGO1_chr1_109499178_109514727	AMIGO1	copy fasta	chr1	109499178	109514727
t0003	0/0	3649	47	31	2	10	2	2	AMIGO1_chr1_109499178_109514727	AMIGO1	copy fasta	chr1	109499178	109514727
t0004	0/1	3649	39	11	7	3	2	15	AMIGO1_chr1_109499178_109514727	AMIGO1	copy fasta	chr1	109499178	109514727
t0005	0/0	3649	37	21	10	0	3	3	AMIGO1_chr1_109499178_109514727	AMIGO1	copy fasta	chr1	109499178	109514727
t0006	0/0	3649	10	0	1	8	0	1	AMIGO1_chr1_109499178_109514727	AMIGO1	copy fasta	chr1	109499178	109514727
t0007	0/0	3649	5	5	0	0	0	0	AMIGO1_chr1_109499178_109514727	AMIGO1	copy fasta	chr1	109499178	109514727
t0008	0/0	3649	4	0	2	0	2	0	AMIGO1_chr1_109499178_109514727	AMIGO1	copy fasta	chr1	109499178	109514727
t0009	0/0	3649	4	2	1	0	0	1	AMIGO1_chr1_109499178_109514727	AMIGO1	copy fasta	chr1	109499178	109514727
t0010	0/0	3649	4	0	0	4	0	0	AMIGO1_chr1_109499178_109514727	AMIGO1	copy fasta	chr1	109499178	109514727
t0011	0/0	3649	4	0	0	4	0	0	AMIGO1_chr1_109499178_109514727	AMIGO1	copy fasta	chr1	109499178	109514727
t0012	0/0	3649	3	0	0	3	0	0	AMIGO1_chr1_109499178_109514727	AMIGO1	copy fasta	chr1	109499178	109514727
t0013	0/0	3649	2	0	2	0	0	0	AMIGO1_chr1_109499178_109514727	AMIGO1	copy fasta	chr1	109499178	109514727
t0014	0/0	3649	2	0	0	2	0	0	AMIGO1_chr1_109499178_109514727	AMIGO1	copy fasta	chr1	109499178	109514727
t0015	0/0	3649	2	0	1	1	0	0	AMIGO1_chr1_109499178_109514727	AMIGO1	copy fasta	chr1	109499178	109514727
t0016	0/0	3649	1	0	0	0	0	1	AMIGO1_chr1_109499178_109514727	AMIGO1	copy fasta	chr1	109499178	109514727
t0017	0/0	3649	1	0	0	1	0	0	AMIGO1_chr1_109499178_109514727	AMIGO1	copy fasta	chr1	109499178	109514727
t0018	0/0	3649	1	0	0	0	0	1	AMIGO1_chr1_109499178_109514727	AMIGO1	copy fasta	chr1	109499178	109514727
t0019	0/0	3649	1	0	1	0	0	0	AMIGO1_chr1_109499178_109514727	AMIGO1	copy fasta	chr1	109499178	109514727
t0020	0/0	3649	1	0	0	1	0	0	AMIGO1_chr1_109499178_109514727	AMIGO1	copy fasta	chr1	109499178	109514727
t0021	0/0	3649	1	1	0	0	0	0	AMIGO1_chr1_109499178_109514727	AMIGO1	copy fasta	chr1	109499178	109514727
t0022	0/0	3649	1	1	0	0	0	0	AMIGO1_chr1_109499178_109514727	AMIGO1	copy fasta	chr1	109499178	109514727
t0023	0/0	3649	1	1	0	0	0	0	AMIGO1_chr1_109499178_109514727	AMIGO1	copy fasta	chr1	109499178	109514727
t0024	0/0	3649	1	1	0	0	0	0	AMIGO1_chr1_109499178_109514727	AMIGO1	copy fasta	chr1	109499178	109514727
t0025	0/0	3649	1	1	0	0	0	0	AMIGO1_chr1_109499178_109514727	AMIGO1	copy fasta	chr1	109499178	109514727
t0026	0/0	3649	1	0	1	0	0	0	AMIGO1_chr1_109499178_109514727	AMIGO1	copy fasta	chr1	109499178	109514727
t0027	0/0	3649	1	0	1	0	0	0	AMIGO1_chr1_109499178_109514727	AMIGO1	copy fasta	chr1	109499178	109514727
t0028	0/0	3649	1	0	0	1	0	0	AMIGO1_chr1_109499178_109514727	AMIGO1	copy fasta	chr1	109499178	109514727
t0029	0/0	3649	1	0	0	1	0	0	AMIGO1_chr1_109499178_109514727	AMIGO1	copy fasta	chr1	109499178	109514727
t0030	0/0	3649	1	0	0	0	0	1	AMIGO1_chr1_109499178_109514727	AMIGO1	copy fasta	chr1	109499178	109514727
t0031	0/0	3649	1	1	0	0	0	0	AMIGO1_chr1_109499178_109514727	AMIGO1	copy fasta	chr1	109499178	109514727

ghapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	chr	start	end
g0001	1/0	127	12	27	75	4	8	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
g0002	0/0	84	10	3	60	1	10	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
g0003	0/0	47	31	2	10	2	2	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
g0004	0/1	39	11	7	3	2	15	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
g0005	0/0	37	21	10	0	3	3	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
g0006	0/0	10	0	1	8	0	1	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
g0007	0/0	5	5	0	0	0	0	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
g0008	0/0	4	0	0	4	0	0	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
g0009	0/0	4	0	2	0	2	0	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
g0010	0/0	4	2	1	0	0	1	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
g0011	0/0	4	0	0	4	0	0	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
g0012	0/0	4	0	0	4	0	0	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
g0013	0/0	3	2	0	0	0	1	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
g0014	0/0	3	0	0	3	0	0	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
g0015	0/0	2	0	2	0	0	0	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
g0016	0/0	2	0	0	2	0	0	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
g0017	0/0	2	0	1	1	0	0	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
g0018	0/0	1	0	0	0	0	1	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
g0019	0/0	1	0	0	1	0	0	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
g0020	0/0	1	0	0	0	0	1	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
g0021	0/0	1	0	1	0	0	0	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
g0022	0/0	1	0	0	1	0	0	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
g0023	0/0	1	1	0	0	0	0	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
g0024	0/0	1	1	0	0	0	0	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
g0025	0/0	1	1	0	0	0	0	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
g0026	0/0	1	1	0	0	0	0	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
g0027	0/0	1	1	0	0	0	0	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
g0028	0/0	1	0	0	1	0	0	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
g0029	0/0	1	0	1	0	0	0	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
g0030	0/0	1	0	1	0	0	0	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
g0031	0/0	1	0	0	1	0	0	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
g0032	0/0	1	0	0	1	0	0	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
g0033	0/0	1	0	0	0	0	1	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
g0034	0/0	1	1	0	0	0	0	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
g0035	0/0	1	0	0	1	0	0	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
g0036	0/0	1	0	1	0	0	0	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727

achapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	clen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	cseq	chr	start	end
a0001c0001	1/1	1482	395	98	59	179	14	43	AMIGO1_chr1_109499178_109514727	AMIGO1	copy fasta	chr1	109499178	109514727
a0001c0003	0/0	1482	1	0	0	1	0	0	AMIGO1_chr1_109499178_109514727	AMIGO1	copy fasta	chr1	109499178	109514727
a0002c0002	0/0	1482	3	2	0	0	0	1	AMIGO1_chr1_109499178_109514727	AMIGO1	copy fasta	chr1	109499178	109514727
a0003c0004	0/0	1503	1	0	1	0	0	0	AMIGO1_chr1_109499178_109514727	AMIGO1	copy fasta	chr1	109499178	109514727

acthapid	grch38 chm13v2	tlen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	tseq	chr	start	end
a0001c0001t0001	1/0	5130	127	12	27	75	4	8	AMIGO1_chr1_109499178_109514727	AMIGO1	copy fasta	chr1	109499178	109514727
a0001c0001t0002	0/0	5130	89	10	3	65	1	10	AMIGO1_chr1_109499178_109514727	AMIGO1	copy fasta	chr1	109499178	109514727
a0001c0001t0003	0/0	5130	47	31	2	10	2	2	AMIGO1_chr1_109499178_109514727	AMIGO1	copy fasta	chr1	109499178	109514727
a0001c0001t0004	0/1	5130	39	11	7	3	2	15	AMIGO1_chr1_109499178_109514727	AMIGO1	copy fasta	chr1	109499178	109514727
a0001c0001t0005	0/0	5130	37	21	10	0	3	3	AMIGO1_chr1_109499178_109514727	AMIGO1	copy fasta	chr1	109499178	109514727
a0001c0001t0006	0/0	5130	10	0	1	8	0	1	AMIGO1_chr1_109499178_109514727	AMIGO1	copy fasta	chr1	109499178	109514727
a0001c0001t0007	0/0	5130	5	5	0	0	0	0	AMIGO1_chr1_109499178_109514727	AMIGO1	copy fasta	chr1	109499178	109514727
a0001c0001t0008	0/0	5130	4	0	2	0	2	0	AMIGO1_chr1_109499178_109514727	AMIGO1	copy fasta	chr1	109499178	109514727
a0001c0001t0009	0/0	5130	4	2	1	0	0	1	AMIGO1_chr1_109499178_109514727	AMIGO1	copy fasta	chr1	109499178	109514727
a0001c0001t0010	0/0	5130	4	0	0	4	0	0	AMIGO1_chr1_109499178_109514727	AMIGO1	copy fasta	chr1	109499178	109514727
a0001c0001t0011	0/0	5130	4	0	0	4	0	0	AMIGO1_chr1_109499178_109514727	AMIGO1	copy fasta	chr1	109499178	109514727
a0001c0001t0012	0/0	5130	3	0	0	3	0	0	AMIGO1_chr1_109499178_109514727	AMIGO1	copy fasta	chr1	109499178	109514727
a0001c0001t0013	0/0	5130	2	0	2	0	0	0	AMIGO1_chr1_109499178_109514727	AMIGO1	copy fasta	chr1	109499178	109514727
a0001c0001t0014	0/0	5130	2	0	0	2	0	0	AMIGO1_chr1_109499178_109514727	AMIGO1	copy fasta	chr1	109499178	109514727
a0001c0001t0015	0/0	5130	2	0	1	1	0	0	AMIGO1_chr1_109499178_109514727	AMIGO1	copy fasta	chr1	109499178	109514727
a0001c0001t0016	0/0	5130	1	0	0	0	0	1	AMIGO1_chr1_109499178_109514727	AMIGO1	copy fasta	chr1	109499178	109514727
a0001c0001t0017	0/0	5130	1	0	0	1	0	0	AMIGO1_chr1_109499178_109514727	AMIGO1	copy fasta	chr1	109499178	109514727
a0001c0001t0018	0/0	5130	1	0	0	0	0	1	AMIGO1_chr1_109499178_109514727	AMIGO1	copy fasta	chr1	109499178	109514727
a0001c0001t0019	0/0	5130	1	0	1	0	0	0	AMIGO1_chr1_109499178_109514727	AMIGO1	copy fasta	chr1	109499178	109514727
a0001c0001t0020	0/0	5130	1	0	0	1	0	0	AMIGO1_chr1_109499178_109514727	AMIGO1	copy fasta	chr1	109499178	109514727
a0001c0001t0021	0/0	5130	1	1	0	0	0	0	AMIGO1_chr1_109499178_109514727	AMIGO1	copy fasta	chr1	109499178	109514727
a0001c0001t0022	0/0	5130	1	1	0	0	0	0	AMIGO1_chr1_109499178_109514727	AMIGO1	copy fasta	chr1	109499178	109514727
a0001c0001t0023	0/0	5130	1	1	0	0	0	0	AMIGO1_chr1_109499178_109514727	AMIGO1	copy fasta	chr1	109499178	109514727
a0001c0001t0024	0/0	5130	1	1	0	0	0	0	AMIGO1_chr1_109499178_109514727	AMIGO1	copy fasta	chr1	109499178	109514727
a0001c0001t0025	0/0	5130	1	1	0	0	0	0	AMIGO1_chr1_109499178_109514727	AMIGO1	copy fasta	chr1	109499178	109514727
a0001c0001t0026	0/0	5130	1	0	1	0	0	0	AMIGO1_chr1_109499178_109514727	AMIGO1	copy fasta	chr1	109499178	109514727
a0001c0001t0027	0/0	5130	1	0	1	0	0	0	AMIGO1_chr1_109499178_109514727	AMIGO1	copy fasta	chr1	109499178	109514727
a0001c0001t0028	0/0	5130	1	0	0	1	0	0	AMIGO1_chr1_109499178_109514727	AMIGO1	copy fasta	chr1	109499178	109514727
a0001c0001t0029	0/0	5130	1	0	0	1	0	0	AMIGO1_chr1_109499178_109514727	AMIGO1	copy fasta	chr1	109499178	109514727
a0001c0001t0030	0/0	5130	1	0	0	0	0	1	AMIGO1_chr1_109499178_109514727	AMIGO1	copy fasta	chr1	109499178	109514727
a0001c0001t0031	0/0	5130	1	1	0	0	0	0	AMIGO1_chr1_109499178_109514727	AMIGO1	copy fasta	chr1	109499178	109514727
a0001c0003t0001	0/0	5130	1	0	0	1	0	0	AMIGO1_chr1_109499178_109514727	AMIGO1	copy fasta	chr1	109499178	109514727
a0002c0002t0001	0/0	5130	3	2	0	0	0	1	AMIGO1_chr1_109499178_109514727	AMIGO1	copy fasta	chr1	109499178	109514727
a0003c0004t0001	0/0	5151	1	0	1	0	0	0	AMIGO1_chr1_109499178_109514727	AMIGO1	copy fasta	chr1	109499178	109514727

actghapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	chr	start	end
a0001c0001t0001g0001	1/0	127	12	27	75	4	8	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
a0001c0001t0002g0002	0/0	84	10	3	60	1	10	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
a0001c0001t0002g0008	0/0	4	0	0	4	0	0	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
a0001c0001t0002g0028	0/0	1	0	0	1	0	0	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
a0001c0001t0003g0003	0/0	47	31	2	10	2	2	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
a0001c0001t0004g0004	0/1	39	11	7	3	2	15	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
a0001c0001t0005g0005	0/0	37	21	10	0	3	3	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
a0001c0001t0006g0006	0/0	10	0	1	8	0	1	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
a0001c0001t0007g0007	0/0	5	5	0	0	0	0	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
a0001c0001t0008g0009	0/0	4	0	2	0	2	0	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
a0001c0001t0009g0010	0/0	4	2	1	0	0	1	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
a0001c0001t0010g0011	0/0	4	0	0	4	0	0	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
a0001c0001t0011g0012	0/0	4	0	0	4	0	0	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
a0001c0001t0012g0014	0/0	3	0	0	3	0	0	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
a0001c0001t0013g0015	0/0	2	0	2	0	0	0	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
a0001c0001t0014g0016	0/0	2	0	0	2	0	0	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
a0001c0001t0015g0017	0/0	2	0	1	1	0	0	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
a0001c0001t0016g0018	0/0	1	0	0	0	0	1	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
a0001c0001t0017g0019	0/0	1	0	0	1	0	0	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
a0001c0001t0018g0020	0/0	1	0	0	0	0	1	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
a0001c0001t0019g0021	0/0	1	0	1	0	0	0	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
a0001c0001t0020g0022	0/0	1	0	0	1	0	0	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
a0001c0001t0021g0023	0/0	1	1	0	0	0	0	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
a0001c0001t0022g0024	0/0	1	1	0	0	0	0	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
a0001c0001t0023g0025	0/0	1	1	0	0	0	0	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
a0001c0001t0024g0026	0/0	1	1	0	0	0	0	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
a0001c0001t0025g0027	0/0	1	1	0	0	0	0	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
a0001c0001t0026g0029	0/0	1	0	1	0	0	0	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
a0001c0001t0027g0030	0/0	1	0	1	0	0	0	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
a0001c0001t0028g0031	0/0	1	0	0	1	0	0	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
a0001c0001t0029g0032	0/0	1	0	0	1	0	0	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
a0001c0001t0030g0033	0/0	1	0	0	0	0	1	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
a0001c0001t0031g0034	0/0	1	1	0	0	0	0	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
a0001c0003t0001g0035	0/0	1	0	0	1	0	0	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
a0002c0002t0001g0013	0/0	3	2	0	0	0	1	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
a0003c0004t0001g0036	0/0	1	0	1	0	0	0	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727

sampleid	ID haplotypeid	ahapid	chapid	thapid	ghapid	gpopname	popname	regionname	genename	chr	start	end
HG00140	hp1	a0001	c0001	t0005	g0005	EUR	GBR	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
HG00140	hp2	a0001	c0001	t0001	g0001	EUR	GBR	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
HG00323	hp1	a0001	c0001	t0004	g0004	EUR	FIN	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
HG00323	hp2	a0001	c0001	t0005	g0005	EUR	FIN	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
HG00408	hp1	a0001	c0001	t0003	g0003	EAS	CHS	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
HG00408	hp2	a0001	c0001	t0002	g0002	EAS	CHS	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
HG00423	hp1	a0001	c0001	t0001	g0001	EAS	CHS	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
HG00423	hp2	a0001	c0001	t0014	g0016	EAS	CHS	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
HG00544	hp1	a0001	c0001	t0012	g0014	EAS	CHS	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
HG00544	hp2	a0001	c0001	t0003	g0003	EAS	CHS	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
HG00558	hp1	a0001	c0001	t0001	g0001	EAS	CHS	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
HG00558	hp2	a0001	c0001	t0001	g0001	EAS	CHS	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
HG00597	hp1	a0001	c0001	t0002	g0002	EAS	CHS	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
HG00597	hp2	a0001	c0001	t0002	g0002	EAS	CHS	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
HG00609	hp1	a0001	c0001	t0002	g0002	EAS	CHS	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
HG00609	hp2	a0001	c0001	t0001	g0001	EAS	CHS	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
HG00639	hp1	a0001	c0001	t0002	g0002	AMR	PUR	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
HG00639	hp2	a0001	c0001	t0001	g0001	AMR	PUR	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
HG00642	hp1	a0001	c0001	t0005	g0005	AMR	PUR	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
HG00642	hp2	a0001	c0001	t0008	g0009	AMR	PUR	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
HG00673	hp1	a0001	c0001	t0001	g0001	EAS	CHS	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
HG00673	hp2	a0001	c0001	t0002	g0002	EAS	CHS	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
HG00733	hp1	a0001	c0001	t0001	g0001	AMR	PUR	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
HG00733	hp2	a0001	c0001	t0004	g0004	AMR	PUR	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
HG00738	hp1	a0001	c0001	t0001	g0001	AMR	PUR	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
HG00738	hp2	a0001	c0001	t0001	g0001	AMR	PUR	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
HG00741	hp1	a0001	c0001	t0005	g0005	AMR	PUR	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
HG00741	hp2	a0001	c0001	t0004	g0004	AMR	PUR	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
HG01069	hp1	a0001	c0001	t0001	g0001	AMR	PUR	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
HG01069	hp2	a0001	c0001	t0005	g0005	AMR	PUR	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
HG01071	hp1	a0001	c0001	t0001	g0001	AMR	PUR	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
HG01071	hp2	a0001	c0001	t0005	g0005	AMR	PUR	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
HG01074	hp1	a0001	c0001	t0002	g0002	AMR	PUR	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
HG01074	hp2	a0001	c0001	t0001	g0001	AMR	PUR	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
HG01081	hp1	a0001	c0001	t0004	g0004	AMR	PUR	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
HG01081	hp2	a0001	c0001	t0001	g0001	AMR	PUR	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
HG01099	hp1	a0001	c0001	t0001	g0001	AMR	PUR	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
HG01099	hp2	a0001	c0001	t0019	g0021	AMR	PUR	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
HG01106	hp1	a0001	c0001	t0003	g0003	AMR	PUR	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
HG01106	hp2	a0001	c0001	t0001	g0001	AMR	PUR	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
HG01109	hp1	a0001	c0001	t0004	g0004	AMR	PUR	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
HG01109	hp2	a0001	c0001	t0001	g0001	AMR	PUR	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
HG01167	hp1	a0001	c0001	t0001	g0001	AMR	PUR	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
HG01167	hp2	a0001	c0001	t0001	g0001	AMR	PUR	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
HG01168	hp1	a0001	c0001	t0001	g0001	AMR	PUR	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
HG01168	hp2	a0001	c0001	t0002	g0002	AMR	PUR	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
HG01169	hp1	a0003	c0004	t0001	g0036	AMR	PUR	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
HG01169	hp2	a0001	c0001	t0001	g0001	AMR	PUR	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
HG01175	hp1	a0001	c0001	t0001	g0001	AMR	PUR	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
HG01175	hp2	a0001	c0001	t0001	g0001	AMR	PUR	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
HG01192	hp1	a0001	c0001	t0001	g0001	AMR	PUR	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
HG01192	hp2	a0001	c0001	t0001	g0001	AMR	PUR	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
HG01243	hp1	a0001	c0001	t0005	g0005	AMR	PUR	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
HG01243	hp2	a0001	c0001	t0009	g0010	AMR	PUR	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
HG01255	hp1	a0001	c0001	t0013	g0015	AMR	CLM	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
HG01255	hp2	a0001	c0001	t0004	g0004	AMR	CLM	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
HG01256	hp1	a0001	c0001	t0026	g0029	AMR	CLM	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
HG01256	hp2	a0001	c0001	t0005	g0005	AMR	CLM	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
HG01258	hp1	a0001	c0001	t0005	g0005	AMR	CLM	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
HG01258	hp2	a0001	c0001	t0001	g0001	AMR	CLM	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
HG01346	hp1	a0001	c0001	t0004	g0004	AMR	CLM	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
HG01346	hp2	a0001	c0001	t0005	g0005	AMR	CLM	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
HG01358	hp1	a0001	c0001	t0013	g0015	AMR	CLM	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
HG01358	hp2	a0001	c0001	t0005	g0005	AMR	CLM	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
HG01361	hp1	a0001	c0001	t0001	g0001	AMR	CLM	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
HG01361	hp2	a0001	c0001	t0004	g0004	AMR	CLM	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
HG01433	hp1	a0001	c0001	t0003	g0003	AMR	CLM	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
HG01433	hp2	a0001	c0001	t0001	g0001	AMR	CLM	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
HG01496	hp1	a0001	c0001	t0015	g0017	AMR	CLM	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
HG01496	hp2	a0001	c0001	t0001	g0001	AMR	CLM	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
HG01515	hp1	a0001	c0001	t0001	g0001	EUR	IBS	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
HG01515	hp2	a0001	c0001	t0008	g0009	EUR	IBS	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
HG01516	hp1	a0001	c0001	t0001	g0001	EUR	IBS	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
HG01516	hp2	a0001	c0001	t0003	g0003	EUR	IBS	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
HG01517	hp1	a0001	c0001	t0008	g0009	EUR	IBS	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
HG01517	hp2	a0001	c0001	t0003	g0003	EUR	IBS	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
HG01884	hp1	a0001	c0001	t0001	g0001	AFR	ACB	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
HG01884	hp2	a0001	c0001	t0003	g0003	AFR	ACB	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
HG01891	hp1	a0001	c0001	t0001	g0001	AFR	ACB	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
HG01891	hp2	a0001	c0001	t0003	g0003	AFR	ACB	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
HG01934	hp1	a0001	c0001	t0027	g0030	AMR	PEL	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
HG01934	hp2	a0001	c0001	t0001	g0001	AMR	PEL	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
HG01975	hp1	a0001	c0001	t0001	g0001	AMR	PEL	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
HG01975	hp2	a0001	c0001	t0001	g0001	AMR	PEL	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
HG01978	hp1	a0001	c0001	t0001	g0001	AMR	PEL	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
HG01978	hp2	a0001	c0001	t0006	g0006	AMR	PEL	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
HG02027	hp1	a0001	c0001	t0001	g0001	EAS	KHV	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
HG02027	hp2	a0001	c0001	t0002	g0002	EAS	KHV	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
HG02040	hp1	a0001	c0001	t0010	g0011	EAS	KHV	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
HG02040	hp2	a0001	c0001	t0002	g0002	EAS	KHV	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
HG02055	hp1	a0001	c0001	t0003	g0003	AFR	ACB	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
HG02055	hp2	a0001	c0001	t0022	g0024	AFR	ACB	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
HG02056	hp1	a0001	c0001	t0002	g0002	EAS	KHV	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
HG02056	hp2	a0001	c0001	t0002	g0002	EAS	KHV	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
HG02071	hp1	a0001	c0001	t0001	g0001	EAS	KHV	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
HG02071	hp2	a0001	c0001	t0003	g0003	EAS	KHV	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
HG02074	hp1	a0001	c0001	t0010	g0011	EAS	KHV	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
HG02074	hp2	a0001	c0001	t0001	g0001	EAS	KHV	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
HG02080	hp1	a0001	c0001	t0001	g0001	EAS	KHV	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
HG02080	hp2	a0001	c0001	t0001	g0001	EAS	KHV	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
HG02083	hp1	a0001	c0001	t0001	g0001	EAS	KHV	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
HG02083	hp2	a0001	c0001	t0001	g0001	EAS	KHV	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
HG02129	hp1	a0001	c0001	t0001	g0001	EAS	KHV	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
HG02129	hp2	a0001	c0001	t0001	g0001	EAS	KHV	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
HG02132	hp1	a0001	c0001	t0001	g0001	EAS	KHV	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
HG02132	hp2	a0001	c0001	t0010	g0011	EAS	KHV	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
HG02135	hp1	a0001	c0001	t0014	g0016	EAS	KHV	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
HG02135	hp2	a0001	c0001	t0002	g0002	EAS	KHV	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
HG02145	hp1	a0001	c0001	t0024	g0026	AFR	ACB	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
HG02145	hp2	a0001	c0001	t0005	g0005	AFR	ACB	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
HG02155	hp1	a0001	c0001	t0002	g0002	EAS	CDX	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
HG02155	hp2	a0001	c0001	t0029	g0032	EAS	CDX	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
HG02165	hp1	a0001	c0001	t0001	g0001	EAS	CDX	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
HG02165	hp2	a0001	c0001	t0004	g0004	EAS	CDX	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
HG02257	hp1	a0001	c0001	t0001	g0001	AFR	ACB	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
HG02257	hp2	a0001	c0001	t0005	g0005	AFR	ACB	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
HG02258	hp1	a0001	c0001	t0005	g0005	AFR	ACB	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
HG02258	hp2	a0001	c0001	t0009	g0010	AFR	ACB	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
HG02280	hp1	a0001	c0001	t0005	g0005	AFR	ACB	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
HG02280	hp2	a0001	c0001	t0002	g0002	AFR	ACB	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
HG02451	hp1	a0001	c0001	t0003	g0003	AFR	ACB	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
HG02451	hp2	a0001	c0001	t0005	g0005	AFR	ACB	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
HG02523	hp1	a0001	c0001	t0002	g0002	EAS	KHV	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
HG02523	hp2	a0001	c0001	t0001	g0001	EAS	KHV	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
HG02572	hp1	a0001	c0001	t0003	g0003	AFR	GWD	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
HG02572	hp2	a0001	c0001	t0004	g0004	AFR	GWD	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
HG02602	hp1	a0001	c0001	t0030	g0033	SAS	PJL	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
HG02602	hp2	a0001	c0001	t0001	g0001	SAS	PJL	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
HG02615	hp1	a0001	c0001	t0005	g0005	AFR	GWD	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
HG02615	hp2	a0001	c0001	t0004	g0004	AFR	GWD	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
HG02622	hp1	a0001	c0001	t0002	g0002	AFR	GWD	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
HG02622	hp2	a0001	c0001	t0003	g0003	AFR	GWD	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
HG02630	hp1	a0001	c0001	t0003	g0003	AFR	GWD	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
HG02630	hp2	a0001	c0001	t0005	g0005	AFR	GWD	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
HG02647	hp1	a0001	c0001	t0007	g0007	AFR	GWD	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
HG02647	hp2	a0001	c0001	t0001	g0001	AFR	GWD	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
HG02683	hp1	a0001	c0001	t0004	g0004	SAS	PJL	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
HG02683	hp2	a0001	c0001	t0016	g0018	SAS	PJL	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
HG02698	hp1	a0001	c0001	t0002	g0002	SAS	PJL	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
HG02698	hp2	a0001	c0001	t0004	g0004	SAS	PJL	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
HG02717	hp1	a0001	c0001	t0005	g0005	AFR	GWD	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
HG02717	hp2	a0001	c0001	t0005	g0005	AFR	GWD	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
HG02723	hp1	a0001	c0001	t0001	g0001	AFR	GWD	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
HG02723	hp2	a0001	c0001	t0023	g0025	AFR	GWD	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
HG02735	hp1	a0001	c0001	t0002	g0002	SAS	PJL	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
HG02735	hp2	a0001	c0001	t0004	g0004	SAS	PJL	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
HG02738	hp1	a0001	c0001	t0003	g0003	SAS	PJL	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
HG02738	hp2	a0001	c0001	t0001	g0001	SAS	PJL	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
HG02809	hp1	a0001	c0001	t0001	g0001	AFR	GWD	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
HG02809	hp2	a0001	c0001	t0003	g0003	AFR	GWD	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
HG02818	hp1	a0001	c0001	t0003	g0003	AFR	GWD	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
HG02818	hp2	a0001	c0001	t0003	g0003	AFR	GWD	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
HG02886	hp1	a0001	c0001	t0004	g0004	AFR	GWD	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
HG02886	hp2	a0001	c0001	t0003	g0003	AFR	GWD	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
HG02895	hp1	a0001	c0001	t0004	g0004	AFR	GWD	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
HG02895	hp2	a0001	c0001	t0003	g0003	AFR	GWD	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
HG02896	hp1	a0001	c0001	t0001	g0001	AFR	GWD	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
HG02896	hp2	a0001	c0001	t0004	g0004	AFR	GWD	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
HG02897	hp1	a0001	c0001	t0001	g0001	AFR	GWD	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
HG02897	hp2	a0001	c0001	t0003	g0003	AFR	GWD	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
HG02922	hp1	a0001	c0001	t0007	g0007	AFR	ESN	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
HG02922	hp2	a0001	c0001	t0003	g0003	AFR	ESN	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
HG02965	hp1	a0001	c0001	t0005	g0005	AFR	ESN	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
HG02965	hp2	a0001	c0001	t0002	g0002	AFR	ESN	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
HG02970	hp1	a0001	c0001	t0004	g0004	AFR	ESN	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
HG02970	hp2	a0001	c0001	t0001	g0001	AFR	ESN	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
HG02976	hp1	a0001	c0001	t0007	g0007	AFR	ESN	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
HG02976	hp2	a0001	c0001	t0003	g0003	AFR	ESN	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
HG03017	hp1	a0001	c0001	t0001	g0001	SAS	PJL	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
HG03017	hp2	a0001	c0001	t0002	g0002	SAS	PJL	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
HG03041	hp1	a0001	c0001	t0004	g0004	AFR	GWD	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
HG03041	hp2	a0001	c0001	t0004	g0004	AFR	GWD	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
HG03098	hp1	a0001	c0001	t0003	g0003	AFR	MSL	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
HG03098	hp2	a0001	c0001	t0004	g0004	AFR	MSL	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
HG03130	hp1	a0001	c0001	t0005	g0005	AFR	ESN	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
HG03130	hp2	a0002	c0002	t0001	g0013	AFR	ESN	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
HG03139	hp1	a0001	c0001	t0005	g0005	AFR	ESN	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
HG03139	hp2	a0001	c0001	t0003	g0003	AFR	ESN	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
HG03195	hp1	a0001	c0001	t0003	g0003	AFR	ESN	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
HG03195	hp2	a0001	c0001	t0003	g0003	AFR	ESN	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
HG03209	hp1	a0001	c0001	t0007	g0007	AFR	MSL	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
HG03209	hp2	a0001	c0001	t0031	g0034	AFR	MSL	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
HG03225	hp1	a0001	c0001	t0002	g0002	AFR	MSL	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
HG03225	hp2	a0001	c0001	t0002	g0002	AFR	MSL	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
HG03453	hp1	a0001	c0001	t0021	g0023	AFR	MSL	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
HG03453	hp2	a0001	c0001	t0003	g0003	AFR	MSL	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
HG03486	hp1	a0001	c0001	t0005	g0005	AFR	MSL	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
HG03486	hp2	a0001	c0001	t0003	g0003	AFR	MSL	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
HG03490	hp1	a0001	c0001	t0005	g0005	SAS	PJL	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
HG03490	hp2	a0001	c0001	t0002	g0002	SAS	PJL	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
HG03491	hp1	a0001	c0001	t0004	g0004	SAS	PJL	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
HG03491	hp2	a0001	c0001	t0004	g0004	SAS	PJL	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
HG03492	hp1	a0001	c0001	t0005	g0005	SAS	PJL	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
HG03492	hp2	a0001	c0001	t0004	g0004	SAS	PJL	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
HG03516	hp1	a0001	c0001	t0003	g0003	AFR	ESN	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
HG03516	hp2	a0001	c0001	t0003	g0003	AFR	ESN	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
HG03540	hp1	a0001	c0001	t0003	g0003	AFR	GWD	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
HG03540	hp2	a0001	c0001	t0005	g0005	AFR	GWD	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
HG03579	hp1	a0001	c0001	t0005	g0005	AFR	MSL	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
HG03579	hp2	a0001	c0001	t0004	g0004	AFR	MSL	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
HG03654	hp1	a0001	c0001	t0001	g0001	SAS	PJL	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
HG03654	hp2	a0002	c0002	t0001	g0013	SAS	PJL	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
HG03669	hp1	a0001	c0001	t0002	g0002	SAS	PJL	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
HG03669	hp2	a0001	c0001	t0003	g0003	SAS	PJL	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
HG03688	hp1	a0001	c0001	t0001	g0001	SAS	STU	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
HG03688	hp2	a0001	c0001	t0002	g0002	SAS	STU	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
HG03704	hp1	a0001	c0001	t0005	g0005	SAS	PJL	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
HG03704	hp2	a0001	c0001	t0004	g0004	SAS	PJL	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
HG03710	hp1	a0001	c0001	t0002	g0002	SAS	PJL	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
HG03710	hp2	a0001	c0001	t0004	g0004	SAS	PJL	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
HG03831	hp1	a0001	c0001	t0018	g0020	SAS	BEB	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
HG03831	hp2	a0001	c0001	t0004	g0004	SAS	BEB	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
HG03834	hp1	a0001	c0001	t0002	g0002	SAS	BEB	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
HG03834	hp2	a0001	c0001	t0001	g0001	SAS	BEB	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
HG03927	hp1	a0001	c0001	t0004	g0004	SAS	BEB	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
HG03927	hp2	a0001	c0001	t0002	g0002	SAS	BEB	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
HG03942	hp1	a0001	c0001	t0004	g0004	SAS	BEB	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
HG03942	hp2	a0001	c0001	t0001	g0001	SAS	BEB	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
HG04115	hp1	a0001	c0001	t0004	g0004	SAS	STU	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
HG04115	hp2	a0001	c0001	t0002	g0002	SAS	STU	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
HG04199	hp1	a0001	c0001	t0004	g0004	SAS	STU	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
HG04199	hp2	a0001	c0001	t0006	g0006	SAS	STU	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
HG04228	hp1	a0001	c0001	t0004	g0004	SAS	STU	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
HG04228	hp2	a0001	c0001	t0004	g0004	SAS	STU	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
NA18522	hp1	a0001	c0001	t0002	g0002	AFR	YRI	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
NA18522	hp2	a0001	c0001	t0003	g0003	AFR	YRI	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
NA18612	hp1	a0001	c0001	t0001	g0001	EAS	CHB	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
NA18612	hp2	a0001	c0001	t0002	g0002	EAS	CHB	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
NA18906	hp1	a0001	c0001	t0003	g0003	AFR	YRI	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
NA18906	hp2	a0001	c0001	t0005	g0005	AFR	YRI	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
NA18939	hp1	a0001	c0001	t0002	g0002	EAS	JPT	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
NA18939	hp2	a0001	c0001	t0001	g0001	EAS	JPT	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
NA18940	hp1	a0001	c0001	t0006	g0006	EAS	JPT	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
NA18940	hp2	a0001	c0001	t0011	g0012	EAS	JPT	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
NA18941	hp1	a0001	c0001	t0001	g0001	EAS	JPT	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
NA18941	hp2	a0001	c0001	t0001	g0001	EAS	JPT	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
NA18942	hp1	a0001	c0001	t0002	g0002	EAS	JPT	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
NA18942	hp2	a0001	c0001	t0001	g0001	EAS	JPT	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
NA18944	hp1	a0001	c0001	t0002	g0002	EAS	JPT	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
NA18944	hp2	a0001	c0001	t0012	g0014	EAS	JPT	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
NA18945	hp1	a0001	c0001	t0001	g0001	EAS	JPT	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
NA18945	hp2	a0001	c0003	t0001	g0035	EAS	JPT	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
NA18946	hp1	a0001	c0001	t0002	g0002	EAS	JPT	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
NA18946	hp2	a0001	c0001	t0004	g0004	EAS	JPT	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
NA18947	hp1	a0001	c0001	t0001	g0001	EAS	JPT	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
NA18947	hp2	a0001	c0001	t0010	g0011	EAS	JPT	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
NA18949	hp1	a0001	c0001	t0001	g0001	EAS	JPT	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
NA18949	hp2	a0001	c0001	t0002	g0008	EAS	JPT	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
NA18950	hp1	a0001	c0001	t0002	g0002	EAS	JPT	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
NA18950	hp2	a0001	c0001	t0002	g0002	EAS	JPT	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
NA18951	hp1	a0001	c0001	t0001	g0001	EAS	JPT	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
NA18951	hp2	a0001	c0001	t0002	g0002	EAS	JPT	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
NA18952	hp1	a0001	c0001	t0001	g0001	EAS	JPT	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
NA18952	hp2	a0001	c0001	t0001	g0001	EAS	JPT	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
NA18953	hp1	a0001	c0001	t0006	g0006	EAS	JPT	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
NA18953	hp2	a0001	c0001	t0002	g0002	EAS	JPT	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
NA18954	hp1	a0001	c0001	t0006	g0006	EAS	JPT	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
NA18954	hp2	a0001	c0001	t0001	g0001	EAS	JPT	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
NA18959	hp1	a0001	c0001	t0003	g0003	EAS	JPT	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
NA18959	hp2	a0001	c0001	t0001	g0001	EAS	JPT	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
NA18960	hp1	a0001	c0001	t0001	g0001	EAS	JPT	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
NA18960	hp2	a0001	c0001	t0002	g0002	EAS	JPT	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
NA18961	hp1	a0001	c0001	t0002	g0008	EAS	JPT	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
NA18961	hp2	a0001	c0001	t0001	g0001	EAS	JPT	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
NA18962	hp1	a0001	c0001	t0003	g0003	EAS	JPT	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
NA18962	hp2	a0001	c0001	t0002	g0002	EAS	JPT	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
NA18963	hp1	a0001	c0001	t0001	g0001	EAS	JPT	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
NA18963	hp2	a0001	c0001	t0002	g0002	EAS	JPT	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
NA18964	hp1	a0001	c0001	t0001	g0001	EAS	JPT	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
NA18964	hp2	a0001	c0001	t0002	g0002	EAS	JPT	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
NA18965	hp1	a0001	c0001	t0002	g0002	EAS	JPT	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
NA18965	hp2	a0001	c0001	t0002	g0002	EAS	JPT	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
NA18966	hp1	a0001	c0001	t0001	g0001	EAS	JPT	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
NA18966	hp2	a0001	c0001	t0002	g0002	EAS	JPT	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
NA18968	hp1	a0001	c0001	t0002	g0002	EAS	JPT	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
NA18968	hp2	a0001	c0001	t0006	g0006	EAS	JPT	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
NA18969	hp1	a0001	c0001	t0002	g0002	EAS	JPT	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
NA18969	hp2	a0001	c0001	t0001	g0001	EAS	JPT	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
NA18972	hp1	a0001	c0001	t0002	g0002	EAS	JPT	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
NA18972	hp2	a0001	c0001	t0001	g0001	EAS	JPT	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
NA18973	hp1	a0001	c0001	t0011	g0012	EAS	JPT	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
NA18973	hp2	a0001	c0001	t0001	g0001	EAS	JPT	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
NA18975	hp1	a0001	c0001	t0002	g0002	EAS	JPT	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
NA18975	hp2	a0001	c0001	t0001	g0001	EAS	JPT	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
NA18978	hp1	a0001	c0001	t0001	g0001	EAS	JPT	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
NA18978	hp2	a0001	c0001	t0002	g0002	EAS	JPT	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
NA18979	hp1	a0001	c0001	t0001	g0001	EAS	JPT	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
NA18979	hp2	a0001	c0001	t0003	g0003	EAS	JPT	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
NA18980	hp1	a0001	c0001	t0003	g0003	EAS	JPT	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
NA18980	hp2	a0001	c0001	t0002	g0002	EAS	JPT	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
NA18981	hp1	a0001	c0001	t0002	g0002	EAS	JPT	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
NA18981	hp2	a0001	c0001	t0002	g0008	EAS	JPT	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
NA18982	hp1	a0001	c0001	t0001	g0001	EAS	JPT	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
NA18982	hp2	a0001	c0001	t0011	g0012	EAS	JPT	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
NA18983	hp1	a0001	c0001	t0002	g0002	EAS	JPT	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
NA18983	hp2	a0001	c0001	t0002	g0008	EAS	JPT	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
NA18984	hp1	a0001	c0001	t0003	g0003	EAS	JPT	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
NA18984	hp2	a0001	c0001	t0001	g0001	EAS	JPT	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
NA18985	hp1	a0001	c0001	t0001	g0001	EAS	JPT	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
NA18985	hp2	a0001	c0001	t0002	g0002	EAS	JPT	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
NA18987	hp1	a0001	c0001	t0001	g0001	EAS	JPT	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
NA18987	hp2	a0001	c0001	t0002	g0002	EAS	JPT	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
NA18990	hp1	a0001	c0001	t0001	g0001	EAS	JPT	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
NA18990	hp2	a0001	c0001	t0002	g0002	EAS	JPT	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
NA18991	hp1	a0001	c0001	t0002	g0002	EAS	JPT	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
NA18991	hp2	a0001	c0001	t0006	g0006	EAS	JPT	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
NA18995	hp1	a0001	c0001	t0002	g0002	EAS	JPT	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
NA18995	hp2	a0001	c0001	t0001	g0001	EAS	JPT	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
NA18998	hp1	a0001	c0001	t0002	g0002	EAS	JPT	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
NA18998	hp2	a0001	c0001	t0002	g0002	EAS	JPT	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
NA18999	hp1	a0001	c0001	t0001	g0001	EAS	JPT	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
NA18999	hp2	a0001	c0001	t0015	g0017	EAS	JPT	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
NA19000	hp1	a0001	c0001	t0001	g0001	EAS	JPT	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
NA19000	hp2	a0001	c0001	t0002	g0002	EAS	JPT	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
NA19001	hp1	a0001	c0001	t0017	g0019	EAS	JPT	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
NA19001	hp2	a0001	c0001	t0001	g0001	EAS	JPT	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
NA19002	hp1	a0001	c0001	t0006	g0006	EAS	JPT	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
NA19002	hp2	a0001	c0001	t0002	g0002	EAS	JPT	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
NA19004	hp1	a0001	c0001	t0002	g0002	EAS	JPT	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
NA19004	hp2	a0001	c0001	t0006	g0006	EAS	JPT	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
NA19005	hp1	a0001	c0001	t0001	g0001	EAS	JPT	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
NA19005	hp2	a0001	c0001	t0003	g0003	EAS	JPT	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
NA19007	hp1	a0001	c0001	t0002	g0002	EAS	JPT	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
NA19007	hp2	a0001	c0001	t0006	g0006	EAS	JPT	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
NA19010	hp1	a0001	c0001	t0001	g0001	EAS	JPT	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
NA19010	hp2	a0001	c0001	t0001	g0001	EAS	JPT	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
NA19011	hp1	a0001	c0001	t0002	g0002	EAS	JPT	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
NA19011	hp2	a0001	c0001	t0001	g0001	EAS	JPT	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
NA19012	hp1	a0001	c0001	t0001	g0001	EAS	JPT	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
NA19012	hp2	a0001	c0001	t0020	g0022	EAS	JPT	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
NA19030	hp1	a0001	c0001	t0003	g0003	AFR	LWK	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
NA19030	hp2	a0001	c0001	t0003	g0003	AFR	LWK	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
NA19043	hp1	a0001	c0001	t0009	g0010	AFR	LWK	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
NA19043	hp2	a0001	c0001	t0003	g0003	AFR	LWK	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
NA19054	hp1	a0001	c0001	t0001	g0001	EAS	JPT	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
NA19054	hp2	a0001	c0001	t0004	g0004	EAS	JPT	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
NA19057	hp1	a0001	c0001	t0002	g0002	EAS	JPT	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
NA19057	hp2	a0001	c0001	t0001	g0001	EAS	JPT	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
NA19060	hp1	a0001	c0001	t0001	g0001	EAS	JPT	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
NA19060	hp2	a0001	c0001	t0002	g0002	EAS	JPT	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
NA19062	hp1	a0001	c0001	t0002	g0002	EAS	JPT	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
NA19062	hp2	a0001	c0001	t0001	g0001	EAS	JPT	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
NA19063	hp1	a0001	c0001	t0001	g0001	EAS	JPT	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
NA19063	hp2	a0001	c0001	t0002	g0002	EAS	JPT	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
NA19064	hp1	a0001	c0001	t0001	g0001	EAS	JPT	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
NA19064	hp2	a0001	c0001	t0002	g0002	EAS	JPT	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
NA19066	hp1	a0001	c0001	t0001	g0001	EAS	JPT	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
NA19066	hp2	a0001	c0001	t0028	g0031	EAS	JPT	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
NA19070	hp1	a0001	c0001	t0002	g0002	EAS	JPT	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
NA19070	hp2	a0001	c0001	t0011	g0012	EAS	JPT	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
NA19074	hp1	a0001	c0001	t0001	g0001	EAS	JPT	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
NA19074	hp2	a0001	c0001	t0002	g0002	EAS	JPT	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
NA19076	hp1	a0001	c0001	t0003	g0003	EAS	JPT	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
NA19076	hp2	a0001	c0001	t0001	g0001	EAS	JPT	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
NA19077	hp1	a0001	c0001	t0001	g0001	EAS	JPT	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
NA19077	hp2	a0001	c0001	t0001	g0001	EAS	JPT	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
NA19081	hp1	a0001	c0001	t0002	g0002	EAS	JPT	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
NA19081	hp2	a0001	c0001	t0001	g0001	EAS	JPT	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
NA19082	hp1	a0001	c0001	t0002	g0028	EAS	JPT	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
NA19082	hp2	a0001	c0001	t0001	g0001	EAS	JPT	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
NA19084	hp1	a0001	c0001	t0001	g0001	EAS	JPT	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
NA19084	hp2	a0001	c0001	t0012	g0014	EAS	JPT	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
NA19085	hp1	a0001	c0001	t0001	g0001	EAS	JPT	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
NA19085	hp2	a0001	c0001	t0001	g0001	EAS	JPT	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
NA19087	hp1	a0001	c0001	t0002	g0002	EAS	JPT	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
NA19087	hp2	a0001	c0001	t0001	g0001	EAS	JPT	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
NA19088	hp1	a0001	c0001	t0002	g0002	EAS	JPT	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
NA19088	hp2	a0001	c0001	t0001	g0001	EAS	JPT	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
NA19090	hp1	a0001	c0001	t0001	g0001	EAS	JPT	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
NA19090	hp2	a0001	c0001	t0002	g0002	EAS	JPT	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
NA19240	hp1	a0001	c0001	t0007	g0007	AFR	YRI	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
NA19240	hp2	a0001	c0001	t0005	g0005	AFR	YRI	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
NA20129	hp1	a0001	c0001	t0002	g0002	AFR	ASW	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
NA20129	hp2	a0001	c0001	t0005	g0005	AFR	ASW	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
NA20752	hp1	a0001	c0001	t0005	g0005	EUR	TSI	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
NA20752	hp2	a0001	c0001	t0004	g0004	EUR	TSI	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
NA20805	hp1	a0001	c0001	t0001	g0001	EUR	TSI	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
NA20805	hp2	a0001	c0001	t0002	g0002	EUR	TSI	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
NA20905	hp1	a0001	c0001	t0009	g0010	SAS	GIH	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
NA20905	hp2	a0001	c0001	t0001	g0001	SAS	GIH	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
HG01123	hp1	a0001	c0001	t0005	g0005	AMR	CLM	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
HG01123	hp2	a0001	c0001	t0008	g0009	AMR	CLM	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
HG02109	hp1	a0001	c0001	t0005	g0005	AFR	ACB	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
HG02109	hp2	a0001	c0001	t0025	g0027	AFR	ACB	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
HG02486	hp1	a0001	c0001	t0003	g0003	AFR	ACB	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
HG02486	hp2	a0001	c0001	t0003	g0003	AFR	ACB	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
HG02559	hp1	a0001	c0001	t0005	g0005	AFR	ACB	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
HG02559	hp2	a0001	c0001	t0001	g0001	AFR	ACB	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
HG03471	hp1	a0001	c0001	t0001	g0001	AFR	MSL	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
HG03471	hp2	a0001	c0001	t0005	g0005	AFR	MSL	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
HG06807	hp1	a0002	c0002	t0001	g0013	AFR	USA	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
HG06807	hp2	a0001	c0001	t0002	g0002	AFR	USA	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
NA18955	hp1	a0001	c0001	t0001	g0001	EAS	JPT	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
NA18955	hp2	a0001	c0001	t0002	g0002	EAS	JPT	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
NA20300	hp1	a0001	c0001	t0002	g0002	AFR	USA	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
NA20300	hp2	a0001	c0001	t0002	g0002	AFR	USA	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
NA21309	hp1	a0001	c0001	t0004	g0004	AFR	LWK	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
NA21309	hp2	a0001	c0001	t0001	g0001	AFR	LWK	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
homoSapiens_chm13v2	hp1	a0001	c0001	t0004	g0004	REF	REF	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727
homoSapiens_grch38	hp1	a0001	c0001	t0001	g0001	REF	REF	AMIGO1_chr1_109499178_109514727	AMIGO1	chr1	109499178	109514727

chr:pos	ref	alt	# # of ahapid:amino-acid(protein) level	ahapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	hgvs_p	genename	geneid	featuretype	featureid	transcript_biotype	rank	cdna cdna pos length	cds cds pos length	aa aa pos length	distance	status	chr	pos
chr1:109508618	T T	TCAGGTGG others(14): Show TCAGGTGGTTGTGGCTCAGCAG	1	a0003 a0003	1	HG01169.hp1 HG01169.hp1	conservative_inframe_insertion	MODERATE	c.274_294dupCTGCTGAG others(13): Show c.274_294dupCTGCTGAGCCACAACCACCTG	p.Leu98_Asn99insLeuL others(17): Show p.Leu98_Asn99insLeuLeuSerHisAsnHisLeu	AMIGO1	ENSG00000181754.7	transcript	ENST00000369864.5	protein_coding	2/2	689/5130	294/1482	98/493			chr1	109508618
chr1:109508840	C C	T T	1	a0002 a0002	3	HG03130.hp2 HG03654.hp2 HG06807.hp1 HG03130.hp2 HG03654.hp2 HG06807.hp1	missense_variant	MODERATE	c.73G>A c.73G>A	p.Ala25Thr p.Ala25Thr	AMIGO1	ENSG00000181754.7	transcript	ENST00000369864.5	protein_coding	2/2	468/5130	73/1482	25/493			chr1	109508840

chr:pos	ref	alt	# # of chapid	chapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	hgvs_p	genename	geneid	featuretype	featureid	transcript_biotype	rank	cdna cdna pos length	cds cds pos length	aa aa pos length	distance	status	chr	pos
chr1:109507497	G G	A A	1	a0001c0003 a0001c0003	1	NA18945.hp2 NA18945.hp2	synonymous_variant	LOW	c.1416C>T c.1416C>T	p.Gly472Gly p.Gly472Gly	AMIGO1	ENSG00000181754.7	transcript	ENST00000369864.5	protein_coding	2/2	1811/5130	1416/1482	472/493			chr1	109507497

chr:pos	ref	alt	# # of thapid:transcript level	thapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	chr	pos
chr1:109504286	C C	T T	1	a0001c0001t0021 a0001c0001t0021	1	HG03453.hp1 HG03453.hp1	3_prime_UTR_variant	MODIFIER	c.3145G>A c.3145G>A	AMIGO1	ENSG00000181754.7	transcript	ENST00000369864.5	protein_coding	2/2	3145	chr1	109504286
chr1:109504294	C C	T T	1	a0001c0001t0027 a0001c0001t0027	1	HG01934.hp1 HG01934.hp1	3_prime_UTR_variant	MODIFIER	c.3137G>A c.3137G>A	AMIGO1	ENSG00000181754.7	transcript	ENST00000369864.5	protein_coding	2/2	3137	chr1	109504294
chr1:109504488	C C	G G	9	a0001c0001t0002 a0001c0001t0005 a0001c0001t0011 others(6): Show a0001c0001t0002 a0001c0001t0005 a0001c0001t0011 a0001c0001t0012 a0001c0001t0017 a0001c0001t0021 a0001c0001t0022 a0001c0001t0030 a0001c0001t0031	138	HG00140.hp1 HG00323.hp2 HG00408.hp2 others(135): Show HG00140.hp1 HG00323.hp2 HG00408.hp2 HG00544.hp1 HG00597.hp1 HG00597.hp2 HG00609.hp1 HG00639.hp1 HG00642.hp1 HG00673.hp2 HG00741.hp1 HG01069.hp2 HG01071.hp2 HG01074.hp1 HG01123.hp1 HG01168.hp2 HG01243.hp1 HG01256.hp2 HG01258.hp1 HG01346.hp2 HG01358.hp2 HG02027.hp2 HG02040.hp2 HG02055.hp2 HG02056.hp1 HG02056.hp2 HG02109.hp1 HG02135.hp2 HG02145.hp2 HG02155.hp1 HG02257.hp2 HG02258.hp1 HG02280.hp1 HG02280.hp2 HG02451.hp2 HG02523.hp1 HG02559.hp1 HG02602.hp1 HG02615.hp1 HG02622.hp1 HG02630.hp2 HG02698.hp1 HG02717.hp1 HG02717.hp2 HG02735.hp1 HG02965.hp1 HG02965.hp2 HG03017.hp2 HG03130.hp1 HG03139.hp1 HG03209.hp2 HG03225.hp1 HG03225.hp2 HG03453.hp1 HG03471.hp2 HG03486.hp1 HG03490.hp1 HG03490.hp2 HG03492.hp1 HG03540.hp2 HG03579.hp1 HG03669.hp1 HG03688.hp2 HG03704.hp1 HG03710.hp1 HG03834.hp1 HG03927.hp2 HG04115.hp2 HG06807.hp2 NA18522.hp1 NA18612.hp2 NA18906.hp2 NA18939.hp1 NA18940.hp2 NA18942.hp1 NA18944.hp1 NA18944.hp2 NA18946.hp1 NA18949.hp2 NA18950.hp1 NA18950.hp2 NA18951.hp2 NA18953.hp2 NA18955.hp2 NA18960.hp2 NA18961.hp1 NA18962.hp2 NA18963.hp2 NA18964.hp2 NA18965.hp1 NA18965.hp2 NA18966.hp2 NA18968.hp1 NA18969.hp1 NA18972.hp1 NA18973.hp1 NA18975.hp1 NA18978.hp2 NA18980.hp2 NA18981.hp1 NA18981.hp2 NA18982.hp2 NA18983.hp1 NA18983.hp2 NA18985.hp2 NA18987.hp2 NA18990.hp2 NA18991.hp1 NA18995.hp1 NA18998.hp1 NA18998.hp2 NA19000.hp2 NA19001.hp1 NA19002.hp2 NA19004.hp1 NA19007.hp1 NA19011.hp1 NA19057.hp1 NA19060.hp2 NA19062.hp1 NA19063.hp2 NA19064.hp2 NA19070.hp1 NA19070.hp2 NA19074.hp2 NA19081.hp1 NA19082.hp1 NA19084.hp2 NA19087.hp1 NA19088.hp1 NA19090.hp2 NA19240.hp2 NA20129.hp1 NA20129.hp2 NA20300.hp1 NA20300.hp2 NA20752.hp1 NA20805.hp2	3_prime_UTR_variant	MODIFIER	c.2943G>C c.2943G>C	AMIGO1	ENSG00000181754.7	transcript	ENST00000369864.5	protein_coding	2/2	2943	chr1	109504488
chr1:109504661	T T	C C	1	a0001c0001t0014 a0001c0001t0014	2	HG00423.hp2 HG02135.hp1 HG00423.hp2 HG02135.hp1	3_prime_UTR_variant	MODIFIER	c.2770A>G c.2770A>G	AMIGO1	ENSG00000181754.7	transcript	ENST00000369864.5	protein_coding	2/2	2770	chr1	109504661
chr1:109504711	G G	A A	6	a0001c0001t0002 a0001c0001t0011 a0001c0001t0012 others(3): Show a0001c0001t0002 a0001c0001t0011 a0001c0001t0012 a0001c0001t0017 a0001c0001t0021 a0001c0001t0031	99	HG00408.hp2 HG00544.hp1 HG00597.hp1 others(96): Show HG00408.hp2 HG00544.hp1 HG00597.hp1 HG00597.hp2 HG00609.hp1 HG00639.hp1 HG00673.hp2 HG01074.hp1 HG01168.hp2 HG02027.hp2 HG02040.hp2 HG02056.hp1 HG02056.hp2 HG02135.hp2 HG02155.hp1 HG02280.hp2 HG02523.hp1 HG02622.hp1 HG02698.hp1 HG02735.hp1 HG02965.hp2 HG03017.hp2 HG03209.hp2 HG03225.hp1 HG03225.hp2 HG03453.hp1 HG03490.hp2 HG03669.hp1 HG03688.hp2 HG03710.hp1 HG03834.hp1 HG03927.hp2 HG04115.hp2 HG06807.hp2 NA18522.hp1 NA18612.hp2 NA18939.hp1 NA18940.hp2 NA18942.hp1 NA18944.hp1 NA18944.hp2 NA18946.hp1 NA18949.hp2 NA18950.hp1 NA18950.hp2 NA18951.hp2 NA18953.hp2 NA18955.hp2 NA18960.hp2 NA18961.hp1 NA18962.hp2 NA18963.hp2 NA18964.hp2 NA18965.hp1 NA18965.hp2 NA18966.hp2 NA18968.hp1 NA18969.hp1 NA18972.hp1 NA18973.hp1 NA18975.hp1 NA18978.hp2 NA18980.hp2 NA18981.hp1 NA18981.hp2 NA18982.hp2 NA18983.hp1 NA18983.hp2 NA18985.hp2 NA18987.hp2 NA18990.hp2 NA18991.hp1 NA18995.hp1 NA18998.hp1 NA18998.hp2 NA19000.hp2 NA19001.hp1 NA19002.hp2 NA19004.hp1 NA19007.hp1 NA19011.hp1 NA19057.hp1 NA19060.hp2 NA19062.hp1 NA19063.hp2 NA19064.hp2 NA19070.hp1 NA19070.hp2 NA19074.hp2 NA19081.hp1 NA19082.hp1 NA19084.hp2 NA19087.hp1 NA19088.hp1 NA19090.hp2 NA20129.hp1 NA20300.hp1 NA20300.hp2 NA20805.hp2	3_prime_UTR_variant	MODIFIER	c.2720C>T c.2720C>T	AMIGO1	ENSG00000181754.7	transcript	ENST00000369864.5	protein_coding	2/2	2720	chr1	109504711
chr1:109505044	G G	C C	1	a0001c0001t0028 a0001c0001t0028	1	NA19066.hp2 NA19066.hp2	3_prime_UTR_variant	MODIFIER	c.2387C>G c.2387C>G	AMIGO1	ENSG00000181754.7	transcript	ENST00000369864.5	protein_coding	2/2	2387	chr1	109505044
chr1:109505196	G G	A A	1	a0001c0001t0029 a0001c0001t0029	1	HG02155.hp2 HG02155.hp2	3_prime_UTR_variant	MODIFIER	c.2235C>T c.2235C>T	AMIGO1	ENSG00000181754.7	transcript	ENST00000369864.5	protein_coding	2/2	2235	chr1	109505196
chr1:109505699	C C	T T	1	a0001c0001t0023 a0001c0001t0023	1	HG02723.hp2 HG02723.hp2	3_prime_UTR_variant	MODIFIER	c.1732G>A c.1732G>A	AMIGO1	ENSG00000181754.7	transcript	ENST00000369864.5	protein_coding	2/2	1732	chr1	109505699
chr1:109505722	G G	A A	1	a0001c0001t0008 a0001c0001t0008	4	HG00642.hp2 HG01123.hp2 HG01515.hp2 others(1): Show HG00642.hp2 HG01123.hp2 HG01515.hp2 HG01517.hp1	3_prime_UTR_variant	MODIFIER	c.1709C>T c.1709C>T	AMIGO1	ENSG00000181754.7	transcript	ENST00000369864.5	protein_coding	2/2	1709	chr1	109505722
chr1:109505751	A A	G G	1	a0001c0001t0020 a0001c0001t0020	1	NA19012.hp2 NA19012.hp2	3_prime_UTR_variant	MODIFIER	c.1680T>C c.1680T>C	AMIGO1	ENSG00000181754.7	transcript	ENST00000369864.5	protein_coding	2/2	1680	chr1	109505751
chr1:109505814	C C	A A	9	a0001c0001t0002 a0001c0001t0005 a0001c0001t0011 others(6): Show a0001c0001t0002 a0001c0001t0005 a0001c0001t0011 a0001c0001t0012 a0001c0001t0017 a0001c0001t0021 a0001c0001t0022 a0001c0001t0030 a0001c0001t0031	138	HG00140.hp1 HG00323.hp2 HG00408.hp2 others(135): Show HG00140.hp1 HG00323.hp2 HG00408.hp2 HG00544.hp1 HG00597.hp1 HG00597.hp2 HG00609.hp1 HG00639.hp1 HG00642.hp1 HG00673.hp2 HG00741.hp1 HG01069.hp2 HG01071.hp2 HG01074.hp1 HG01123.hp1 HG01168.hp2 HG01243.hp1 HG01256.hp2 HG01258.hp1 HG01346.hp2 HG01358.hp2 HG02027.hp2 HG02040.hp2 HG02055.hp2 HG02056.hp1 HG02056.hp2 HG02109.hp1 HG02135.hp2 HG02145.hp2 HG02155.hp1 HG02257.hp2 HG02258.hp1 HG02280.hp1 HG02280.hp2 HG02451.hp2 HG02523.hp1 HG02559.hp1 HG02602.hp1 HG02615.hp1 HG02622.hp1 HG02630.hp2 HG02698.hp1 HG02717.hp1 HG02717.hp2 HG02735.hp1 HG02965.hp1 HG02965.hp2 HG03017.hp2 HG03130.hp1 HG03139.hp1 HG03209.hp2 HG03225.hp1 HG03225.hp2 HG03453.hp1 HG03471.hp2 HG03486.hp1 HG03490.hp1 HG03490.hp2 HG03492.hp1 HG03540.hp2 HG03579.hp1 HG03669.hp1 HG03688.hp2 HG03704.hp1 HG03710.hp1 HG03834.hp1 HG03927.hp2 HG04115.hp2 HG06807.hp2 NA18522.hp1 NA18612.hp2 NA18906.hp2 NA18939.hp1 NA18940.hp2 NA18942.hp1 NA18944.hp1 NA18944.hp2 NA18946.hp1 NA18949.hp2 NA18950.hp1 NA18950.hp2 NA18951.hp2 NA18953.hp2 NA18955.hp2 NA18960.hp2 NA18961.hp1 NA18962.hp2 NA18963.hp2 NA18964.hp2 NA18965.hp1 NA18965.hp2 NA18966.hp2 NA18968.hp1 NA18969.hp1 NA18972.hp1 NA18973.hp1 NA18975.hp1 NA18978.hp2 NA18980.hp2 NA18981.hp1 NA18981.hp2 NA18982.hp2 NA18983.hp1 NA18983.hp2 NA18985.hp2 NA18987.hp2 NA18990.hp2 NA18991.hp1 NA18995.hp1 NA18998.hp1 NA18998.hp2 NA19000.hp2 NA19001.hp1 NA19002.hp2 NA19004.hp1 NA19007.hp1 NA19011.hp1 NA19057.hp1 NA19060.hp2 NA19062.hp1 NA19063.hp2 NA19064.hp2 NA19070.hp1 NA19070.hp2 NA19074.hp2 NA19081.hp1 NA19082.hp1 NA19084.hp2 NA19087.hp1 NA19088.hp1 NA19090.hp2 NA19240.hp2 NA20129.hp1 NA20129.hp2 NA20300.hp1 NA20300.hp2 NA20752.hp1 NA20805.hp2	3_prime_UTR_variant	MODIFIER	c.1617G>T c.1617G>T	AMIGO1	ENSG00000181754.7	transcript	ENST00000369864.5	protein_coding	2/2	1617	chr1	109505814
chr1:109505856	T T	A A	1	a0001c0001t0023 a0001c0001t0023	1	HG02723.hp2 HG02723.hp2	3_prime_UTR_variant	MODIFIER	c.1575A>T c.1575A>T	AMIGO1	ENSG00000181754.7	transcript	ENST00000369864.5	protein_coding	2/2	1575	chr1	109505856
chr1:109505905	G G	A A	9	a0001c0001t0002 a0001c0001t0005 a0001c0001t0011 others(6): Show a0001c0001t0002 a0001c0001t0005 a0001c0001t0011 a0001c0001t0012 a0001c0001t0017 a0001c0001t0021 a0001c0001t0022 a0001c0001t0030 a0001c0001t0031	138	HG00140.hp1 HG00323.hp2 HG00408.hp2 others(135): Show HG00140.hp1 HG00323.hp2 HG00408.hp2 HG00544.hp1 HG00597.hp1 HG00597.hp2 HG00609.hp1 HG00639.hp1 HG00642.hp1 HG00673.hp2 HG00741.hp1 HG01069.hp2 HG01071.hp2 HG01074.hp1 HG01123.hp1 HG01168.hp2 HG01243.hp1 HG01256.hp2 HG01258.hp1 HG01346.hp2 HG01358.hp2 HG02027.hp2 HG02040.hp2 HG02055.hp2 HG02056.hp1 HG02056.hp2 HG02109.hp1 HG02135.hp2 HG02145.hp2 HG02155.hp1 HG02257.hp2 HG02258.hp1 HG02280.hp1 HG02280.hp2 HG02451.hp2 HG02523.hp1 HG02559.hp1 HG02602.hp1 HG02615.hp1 HG02622.hp1 HG02630.hp2 HG02698.hp1 HG02717.hp1 HG02717.hp2 HG02735.hp1 HG02965.hp1 HG02965.hp2 HG03017.hp2 HG03130.hp1 HG03139.hp1 HG03209.hp2 HG03225.hp1 HG03225.hp2 HG03453.hp1 HG03471.hp2 HG03486.hp1 HG03490.hp1 HG03490.hp2 HG03492.hp1 HG03540.hp2 HG03579.hp1 HG03669.hp1 HG03688.hp2 HG03704.hp1 HG03710.hp1 HG03834.hp1 HG03927.hp2 HG04115.hp2 HG06807.hp2 NA18522.hp1 NA18612.hp2 NA18906.hp2 NA18939.hp1 NA18940.hp2 NA18942.hp1 NA18944.hp1 NA18944.hp2 NA18946.hp1 NA18949.hp2 NA18950.hp1 NA18950.hp2 NA18951.hp2 NA18953.hp2 NA18955.hp2 NA18960.hp2 NA18961.hp1 NA18962.hp2 NA18963.hp2 NA18964.hp2 NA18965.hp1 NA18965.hp2 NA18966.hp2 NA18968.hp1 NA18969.hp1 NA18972.hp1 NA18973.hp1 NA18975.hp1 NA18978.hp2 NA18980.hp2 NA18981.hp1 NA18981.hp2 NA18982.hp2 NA18983.hp1 NA18983.hp2 NA18985.hp2 NA18987.hp2 NA18990.hp2 NA18991.hp1 NA18995.hp1 NA18998.hp1 NA18998.hp2 NA19000.hp2 NA19001.hp1 NA19002.hp2 NA19004.hp1 NA19007.hp1 NA19011.hp1 NA19057.hp1 NA19060.hp2 NA19062.hp1 NA19063.hp2 NA19064.hp2 NA19070.hp1 NA19070.hp2 NA19074.hp2 NA19081.hp1 NA19082.hp1 NA19084.hp2 NA19087.hp1 NA19088.hp1 NA19090.hp2 NA19240.hp2 NA20129.hp1 NA20129.hp2 NA20300.hp1 NA20300.hp2 NA20752.hp1 NA20805.hp2	3_prime_UTR_variant	MODIFIER	c.1526C>T c.1526C>T	AMIGO1	ENSG00000181754.7	transcript	ENST00000369864.5	protein_coding	2/2	1526	chr1	109505905
chr1:109506282	T T	C C	2	a0001c0001t0010 a0001c0001t0015 a0001c0001t0010 a0001c0001t0015	6	HG01496.hp1 HG02040.hp1 HG02074.hp1 others(3): Show HG01496.hp1 HG02040.hp1 HG02074.hp1 HG02132.hp2 NA18947.hp2 NA18999.hp2	3_prime_UTR_variant	MODIFIER	c.1149A>G c.1149A>G	AMIGO1	ENSG00000181754.7	transcript	ENST00000369864.5	protein_coding	2/2	1149	chr1	109506282
chr1:109506299	A A	G G	1	a0001c0001t0007 a0001c0001t0007	5	HG02647.hp1 HG02922.hp1 HG02976.hp1 others(2): Show HG02647.hp1 HG02922.hp1 HG02976.hp1 HG03209.hp1 NA19240.hp1	3_prime_UTR_variant	MODIFIER	c.1132T>C c.1132T>C	AMIGO1	ENSG00000181754.7	transcript	ENST00000369864.5	protein_coding	2/2	1132	chr1	109506299
chr1:109506505	G G	C C	5	a0001c0001t0009 a0001c0001t0010 a0001c0001t0015 others(2): Show a0001c0001t0009 a0001c0001t0010 a0001c0001t0015 a0001c0001t0024 a0001c0001t0025	12	HG01243.hp2 HG01496.hp1 HG02040.hp1 others(9): Show HG01243.hp2 HG01496.hp1 HG02040.hp1 HG02074.hp1 HG02109.hp2 HG02132.hp2 HG02145.hp1 HG02258.hp2 NA18947.hp2 NA18999.hp2 NA19043.hp1 NA20905.hp1	3_prime_UTR_variant	MODIFIER	c.926C>G c.926C>G	AMIGO1	ENSG00000181754.7	transcript	ENST00000369864.5	protein_coding	2/2	926	chr1	109506505
chr1:109506542	G G	T T	1	a0001c0001t0013 a0001c0001t0013	2	HG01255.hp1 HG01358.hp1 HG01255.hp1 HG01358.hp1	3_prime_UTR_variant	MODIFIER	c.889C>A c.889C>A	AMIGO1	ENSG00000181754.7	transcript	ENST00000369864.5	protein_coding	2/2	889	chr1	109506542
chr1:109506581	G G	C C	8	a0001c0001t0004 a0001c0001t0008 a0001c0001t0009 others(5): Show a0001c0001t0004 a0001c0001t0008 a0001c0001t0009 a0001c0001t0010 a0001c0001t0015 a0001c0001t0018 a0001c0001t0024 a0001c0001t0025	56	HG00323.hp1 HG00642.hp2 HG00733.hp2 others(53): Show HG00323.hp1 HG00642.hp2 HG00733.hp2 HG00741.hp2 HG01081.hp1 HG01109.hp1 HG01123.hp2 HG01243.hp2 HG01255.hp2 HG01346.hp1 HG01361.hp2 HG01496.hp1 HG01515.hp2 HG01517.hp1 HG02040.hp1 HG02074.hp1 HG02109.hp2 HG02132.hp2 HG02145.hp1 HG02165.hp2 HG02258.hp2 HG02572.hp2 HG02615.hp2 HG02683.hp1 HG02698.hp2 HG02735.hp2 HG02886.hp1 HG02895.hp1 HG02896.hp2 HG02970.hp1 HG03041.hp1 HG03041.hp2 HG03098.hp2 HG03491.hp1 HG03491.hp2 HG03492.hp2 HG03579.hp2 HG03704.hp2 HG03710.hp2 HG03831.hp1 HG03831.hp2 HG03927.hp1 HG03942.hp1 HG04115.hp1 HG04199.hp1 HG04228.hp1 HG04228.hp2 NA18946.hp2 NA18947.hp2 NA18999.hp2 NA19043.hp1 NA19054.hp2 NA20752.hp2 NA20905.hp1 NA21309.hp1 homoSapiens_chm13v2.hp1	3_prime_UTR_variant	MODIFIER	c.850C>G c.850C>G	AMIGO1	ENSG00000181754.7	transcript	ENST00000369864.5	protein_coding	2/2	850	chr1	109506581
chr1:109506585	C C	T T	1	a0001c0001t0026 a0001c0001t0026	1	HG01256.hp1 HG01256.hp1	3_prime_UTR_variant	MODIFIER	c.846G>A c.846G>A	AMIGO1	ENSG00000181754.7	transcript	ENST00000369864.5	protein_coding	2/2	846	chr1	109506585
chr1:109506664	C C	T T	1	a0001c0001t0019 a0001c0001t0019	1	HG01099.hp2 HG01099.hp2	3_prime_UTR_variant	MODIFIER	c.767G>A c.767G>A	AMIGO1	ENSG00000181754.7	transcript	ENST00000369864.5	protein_coding	2/2	767	chr1	109506664
chr1:109506835	G G	A A	1	a0001c0001t0022 a0001c0001t0022	1	HG02055.hp2 HG02055.hp2	3_prime_UTR_variant	MODIFIER	c.596C>T c.596C>T	AMIGO1	ENSG00000181754.7	transcript	ENST00000369864.5	protein_coding	2/2	596	chr1	109506835
chr1:109506882	G G	A A	1	a0001c0001t0023 a0001c0001t0023	1	HG02723.hp2 HG02723.hp2	3_prime_UTR_variant	MODIFIER	c.549C>T c.549C>T	AMIGO1	ENSG00000181754.7	transcript	ENST00000369864.5	protein_coding	2/2	549	chr1	109506882
chr1:109507013	A A	G G	1	a0001c0001t0018 a0001c0001t0018	1	HG03831.hp1 HG03831.hp1	3_prime_UTR_variant	MODIFIER	c.418T>C c.418T>C	AMIGO1	ENSG00000181754.7	transcript	ENST00000369864.5	protein_coding	2/2	418	chr1	109507013
chr1:109507212	G G	A A	1	a0001c0001t0024 a0001c0001t0024	1	HG02145.hp1 HG02145.hp1	3_prime_UTR_variant	MODIFIER	c.219C>T c.219C>T	AMIGO1	ENSG00000181754.7	transcript	ENST00000369864.5	protein_coding	2/2	219	chr1	109507212
chr1:109507400	G G	T T	1	a0001c0001t0017 a0001c0001t0017	1	NA19001.hp1 NA19001.hp1	3_prime_UTR_variant	MODIFIER	c.31C>A c.31C>A	AMIGO1	ENSG00000181754.7	transcript	ENST00000369864.5	protein_coding	2/2	31	chr1	109507400
chr1:109507402	G G	A A	1	a0001c0001t0025 a0001c0001t0025	1	HG02109.hp2 HG02109.hp2	3_prime_UTR_variant	MODIFIER	c.29C>T c.29C>T	AMIGO1	ENSG00000181754.7	transcript	ENST00000369864.5	protein_coding	2/2	29	chr1	109507402
chr1:109509517	A A	G G	18	a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 others(15): Show a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0005 a0001c0001t0007 a0001c0001t0008 a0001c0001t0009 a0001c0001t0010 a0001c0001t0011 a0001c0001t0017 a0001c0001t0018 a0001c0001t0019 a0001c0001t0020 a0001c0001t0021 a0001c0001t0022 a0001c0001t0023 a0001c0001t0024 a0001c0001t0025	242	HG00140.hp1 HG00323.hp1 HG00323.hp2 others(239): Show HG00140.hp1 HG00323.hp1 HG00323.hp2 HG00408.hp1 HG00408.hp2 HG00544.hp2 HG00597.hp1 HG00597.hp2 HG00609.hp1 HG00639.hp1 HG00642.hp1 HG00642.hp2 HG00673.hp2 HG00733.hp2 HG00741.hp1 HG00741.hp2 HG01069.hp2 HG01071.hp2 HG01074.hp1 HG01081.hp1 HG01099.hp2 HG01106.hp1 HG01109.hp1 HG01123.hp1 HG01123.hp2 HG01168.hp2 HG01243.hp1 HG01243.hp2 HG01255.hp2 HG01256.hp2 HG01258.hp1 HG01346.hp1 HG01346.hp2 HG01358.hp2 HG01361.hp2 HG01433.hp1 HG01515.hp2 HG01516.hp2 HG01517.hp1 HG01517.hp2 HG01884.hp2 HG01891.hp2 HG02027.hp2 HG02040.hp1 HG02040.hp2 HG02055.hp1 HG02055.hp2 HG02056.hp1 HG02056.hp2 HG02071.hp2 HG02074.hp1 HG02109.hp1 HG02109.hp2 HG02132.hp2 HG02135.hp2 HG02145.hp1 HG02145.hp2 HG02155.hp1 HG02165.hp2 HG02257.hp2 HG02258.hp1 HG02258.hp2 HG02280.hp1 HG02280.hp2 HG02451.hp1 HG02451.hp2 HG02486.hp1 HG02486.hp2 HG02523.hp1 HG02559.hp1 HG02572.hp1 HG02572.hp2 HG02615.hp1 HG02615.hp2 HG02622.hp1 HG02622.hp2 HG02630.hp1 HG02630.hp2 HG02647.hp1 HG02683.hp1 HG02698.hp1 HG02698.hp2 HG02717.hp1 HG02717.hp2 HG02723.hp2 HG02735.hp1 HG02735.hp2 HG02738.hp1 HG02809.hp2 HG02818.hp1 HG02818.hp2 HG02886.hp1 HG02886.hp2 HG02895.hp1 HG02895.hp2 HG02896.hp2 HG02897.hp2 HG02922.hp1 HG02922.hp2 HG02965.hp1 HG02965.hp2 HG02970.hp1 HG02976.hp1 HG02976.hp2 HG03017.hp2 HG03041.hp1 HG03041.hp2 HG03098.hp1 HG03098.hp2 HG03130.hp1 HG03139.hp1 HG03139.hp2 HG03195.hp1 HG03195.hp2 HG03209.hp1 HG03225.hp1 HG03225.hp2 HG03453.hp1 HG03453.hp2 HG03471.hp2 HG03486.hp1 HG03486.hp2 HG03490.hp1 HG03490.hp2 HG03491.hp1 HG03491.hp2 HG03492.hp1 HG03492.hp2 HG03516.hp1 HG03516.hp2 HG03540.hp1 HG03540.hp2 HG03579.hp1 HG03579.hp2 HG03669.hp1 HG03669.hp2 HG03688.hp2 HG03704.hp1 HG03704.hp2 HG03710.hp1 HG03710.hp2 HG03831.hp1 HG03831.hp2 HG03834.hp1 HG03927.hp1 HG03927.hp2 HG03942.hp1 HG04115.hp1 HG04115.hp2 HG04199.hp1 HG04228.hp1 HG04228.hp2 HG06807.hp2 NA18522.hp1 NA18522.hp2 NA18612.hp2 NA18906.hp1 NA18906.hp2 NA18939.hp1 NA18940.hp2 NA18942.hp1 NA18944.hp1 NA18946.hp1 NA18946.hp2 NA18947.hp2 NA18949.hp2 NA18950.hp1 NA18950.hp2 NA18951.hp2 NA18953.hp2 NA18955.hp2 NA18959.hp1 NA18960.hp2 NA18961.hp1 NA18962.hp1 NA18962.hp2 NA18963.hp2 NA18964.hp2 NA18965.hp1 NA18965.hp2 NA18966.hp2 NA18968.hp1 NA18969.hp1 NA18972.hp1 NA18973.hp1 NA18975.hp1 NA18978.hp2 NA18979.hp2 NA18980.hp1 NA18980.hp2 NA18981.hp1 NA18981.hp2 NA18982.hp2 NA18983.hp1 NA18983.hp2 NA18984.hp1 NA18985.hp2 NA18987.hp2 NA18990.hp2 NA18991.hp1 NA18995.hp1 NA18998.hp1 NA18998.hp2 NA19000.hp2 NA19001.hp1 NA19002.hp2 NA19004.hp1 NA19005.hp2 NA19007.hp1 NA19011.hp1 NA19012.hp2 NA19030.hp1 NA19030.hp2 NA19043.hp1 NA19043.hp2 NA19054.hp2 NA19057.hp1 NA19060.hp2 NA19062.hp1 NA19063.hp2 NA19064.hp2 NA19070.hp1 NA19070.hp2 NA19074.hp2 NA19076.hp1 NA19081.hp1 NA19082.hp1 NA19087.hp1 NA19088.hp1 NA19090.hp2 NA19240.hp1 NA19240.hp2 NA20129.hp1 NA20129.hp2 NA20300.hp1 NA20300.hp2 NA20752.hp1 NA20752.hp2 NA20805.hp2 NA20905.hp1 NA21309.hp1 homoSapiens_chm13v2.hp1	5_prime_UTR_variant	MODIFIER	c.-185T>C c.-185T>C	AMIGO1	ENSG00000181754.7	transcript	ENST00000369864.5	protein_coding	1/2	605	chr1	109509517
chr1:109509585	C C	T T	1	a0001c0001t0016 a0001c0001t0016	1	HG02683.hp2 HG02683.hp2	5_prime_UTR_variant	MODIFIER	c.-253G>A c.-253G>A	AMIGO1	ENSG00000181754.7	transcript	ENST00000369864.5	protein_coding	1/2	673	chr1	109509585
chr1:109509675	G G	C C	2	a0001c0001t0006 a0001c0001t0012 a0001c0001t0006 a0001c0001t0012	13	HG00544.hp1 HG01978.hp2 HG04199.hp2 others(10): Show HG00544.hp1 HG01978.hp2 HG04199.hp2 NA18940.hp1 NA18944.hp2 NA18953.hp1 NA18954.hp1 NA18968.hp2 NA18991.hp2 NA19002.hp1 NA19004.hp2 NA19007.hp2 NA19084.hp2	5_prime_UTR_variant	MODIFIER	c.-343C>G c.-343C>G	AMIGO1	ENSG00000181754.7	transcript	ENST00000369864.5	protein_coding	1/2	763	chr1	109509675
chr1:109509714	T T	A A	1	a0001c0001t0011 a0001c0001t0011	4	NA18940.hp2 NA18973.hp1 NA18982.hp2 others(1): Show NA18940.hp2 NA18973.hp1 NA18982.hp2 NA19070.hp2	5_prime_UTR_variant	MODIFIER	c.-382A>T c.-382A>T	AMIGO1	ENSG00000181754.7	transcript	ENST00000369864.5	protein_coding	1/2	802	chr1	109509714

chr:pos	ref	alt	# # of ghapid:genebody level	ghapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	hgvs_p	genename	geneid	featuretype	featureid	genebody_biotype	rank	cdna cdna pos length	cds cds pos length	aa aa pos length	distance	status	chr	pos
chr1:109509091	C C	G G	1	a0001c0001t0002g0008 a0001c0001t0002g0008	4	NA18949.hp2 NA18961.hp1 NA18981.hp2 others(1): Show NA18949.hp2 NA18961.hp1 NA18981.hp2 NA18983.hp2	intron_variant	MODIFIER	c.-87-92G>C c.-87-92G>C		AMIGO1	ENSG00000181754.7	transcript	ENST00000369864.5	protein_coding	1/1						chr1	109509091
chr1:109509310	C C	A A	1	a0001c0001t0002g0028 a0001c0001t0002g0028	1	NA19082.hp1 NA19082.hp1	intron_variant	MODIFIER	c.-88+110G>T c.-88+110G>T		AMIGO1	ENSG00000181754.7	transcript	ENST00000369864.5	protein_coding	1/1						chr1	109509310

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🧬 Gene Summary

AAmino acid(protein) Level Haplotype Info (Total: 3)

CCoding Level Haplotype Info (Total: 4)

TTranscript Level Haplotype Info (Total: 31)

GGenebody Level Haplotype Info (Total: 36)

A C AC Level (Amino Acid + Coding) Haplotype Info (Total: 4)

A C T ACT Level (Amino Acid + Coding + Transcript) Haplotype Info (Total: 34)

A C T G ACTG Level (Amino Acid + Coding + Transcript + Genebody) Haplotype Info (Total: 36)

Haplotype Details by Sample (Haploid Level) (Total: 400)

AAmino acid(protein) Level Haplotype Related Variants (Effect to Protein Coding Variants) (Total: 2)

CCoding Level Variants (Synonymous Mutations) (Total: 1)

TTranscript Level Haplotype Variants (5'UTR+3'UTR) (Total: 30)

GGenebody Level Haplotype Variants (Intron) (Total: 2)

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Annotation (Repeats)

Annotation (SNP Array)