Multiple Alignments (by aa haplotype frequency)
Multiple Alignments (by aa haplotype similarity)
| Item | Value |
|---|---|
| geneid | 1134 |
| ensemblid | ENSG00000138435.16 |
| hgncid | 1955 |
| symbol | CHRNA1 |
| name | cholinergic receptor nicotinic alpha 1 subunit |
| refseq_nuc | NM_000079.4 |
| refseq_prot | NP_000070.1 |
| ensembl_nuc | ENST00000348749.9 |
| ensembl_prot | ENSP00000261008.5 |
| mane_status | MANE Select |
| chr | chr2 |
| start | 174747592 |
| end | 174764472 |
| strand | - |
| ver | v1.2 |
| region | chr2:174747592-174764472 |
| region5000 | chr2:174742592-174769472 |
| regionname0 | CHRNA1_chr2_174747592_174764472 |
| regionname5000 | CHRNA1_chr2_174742592_174769472 |
| ahapid | grch38/chm13v2 | alen | total | AFR | AMR | EAS | EUR | SAS | JPT | regionname | genename | aa | chr | start | end |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| a0001 | 1/1 | 457 | 351 | 78 | 57 | 150 | 18 | 46 | 112 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | copy fasta | chr2 | 174742592 | 174769472 |
| a0002 | 0/0 | 457 | 8 | 8 | 0 | 0 | 0 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | copy fasta | chr2 | 174742592 | 174769472 |
| a0003 | 0/0 | 457 | 3 | 3 | 0 | 0 | 0 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | copy fasta | chr2 | 174742592 | 174769472 |
| a0004 | 0/0 | 457 | 2 | 2 | 0 | 0 | 0 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | copy fasta | chr2 | 174742592 | 174769472 |
| a0005 | 0/0 | 457 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | copy fasta | chr2 | 174742592 | 174769472 |
| a0006 | 0/0 | 457 | 1 | 0 | 0 | 1 | 0 | 0 | 1 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | copy fasta | chr2 | 174742592 | 174769472 |
| a0007 | 0/0 | 457 | 1 | 0 | 0 | 1 | 0 | 0 | 1 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | copy fasta | chr2 | 174742592 | 174769472 |
| a0008 | 0/0 | 457 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | copy fasta | chr2 | 174742592 | 174769472 |
| a0009 | 0/0 | 457 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | copy fasta | chr2 | 174742592 | 174769472 |
| a0010 | 0/0 | 457 | 1 | 0 | 1 | 0 | 0 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | copy fasta | chr2 | 174742592 | 174769472 |
| chapid | grch38/chm13v2 | clen | total | AFR | AMR | EAS | EUR | SAS | regionname | genename | cseq | chr | start | end |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| c0001 | 1/1 | 1374 | 305 | 64 | 50 | 132 | 17 | 40 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | copy fasta | chr2 | 174742592 | 174769472 |
| c0002 | 0/0 | 1374 | 42 | 11 | 7 | 17 | 1 | 6 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | copy fasta | chr2 | 174742592 | 174769472 |
| c0003 | 0/0 | 1374 | 8 | 8 | 0 | 0 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | copy fasta | chr2 | 174742592 | 174769472 |
| c0004 | 0/0 | 1374 | 3 | 3 | 0 | 0 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | copy fasta | chr2 | 174742592 | 174769472 |
| c0005 | 0/0 | 1374 | 2 | 2 | 0 | 0 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | copy fasta | chr2 | 174742592 | 174769472 |
| c0006 | 0/0 | 1374 | 2 | 2 | 0 | 0 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | copy fasta | chr2 | 174742592 | 174769472 |
| c0007 | 0/0 | 1374 | 1 | 1 | 0 | 0 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | copy fasta | chr2 | 174742592 | 174769472 |
| c0008 | 0/0 | 1374 | 1 | 0 | 0 | 1 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | copy fasta | chr2 | 174742592 | 174769472 |
| c0009 | 0/0 | 1374 | 1 | 1 | 0 | 0 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | copy fasta | chr2 | 174742592 | 174769472 |
| c0010 | 0/0 | 1374 | 1 | 0 | 0 | 1 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | copy fasta | chr2 | 174742592 | 174769472 |
| c0011 | 0/0 | 1374 | 1 | 1 | 0 | 0 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | copy fasta | chr2 | 174742592 | 174769472 |
| c0012 | 0/0 | 1374 | 1 | 0 | 1 | 0 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | copy fasta | chr2 | 174742592 | 174769472 |
| c0013 | 0/0 | 1374 | 1 | 0 | 0 | 1 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | copy fasta | chr2 | 174742592 | 174769472 |
| c0014 | 0/0 | 1374 | 1 | 1 | 0 | 0 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | copy fasta | chr2 | 174742592 | 174769472 |
| thapid | grch38chm13v2 | tlen | total | AFR | AMR | EAS | EUR | SAS | regionname | genename | tseq | chr | start | end |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| t0001 | 1/1 | 611 | 359 | 84 | 58 | 152 | 18 | 45 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | copy fasta | chr2 | 174742592 | 174769472 |
| t0002 | 0/0 | 611 | 2 | 2 | 0 | 0 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | copy fasta | chr2 | 174742592 | 174769472 |
| t0003 | 0/0 | 611 | 2 | 2 | 0 | 0 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | copy fasta | chr2 | 174742592 | 174769472 |
| t0004 | 0/0 | 610 | 2 | 2 | 0 | 0 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | copy fasta | chr2 | 174742592 | 174769472 |
| t0005 | 0/0 | 611 | 1 | 1 | 0 | 0 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | copy fasta | chr2 | 174742592 | 174769472 |
| t0006 | 0/0 | 611 | 1 | 0 | 0 | 0 | 0 | 1 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | copy fasta | chr2 | 174742592 | 174769472 |
| t0007 | 0/0 | 610 | 1 | 1 | 0 | 0 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | copy fasta | chr2 | 174742592 | 174769472 |
| t0008 | 0/0 | 611 | 1 | 1 | 0 | 0 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | copy fasta | chr2 | 174742592 | 174769472 |
| t0009 | 0/0 | 611 | 1 | 1 | 0 | 0 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | copy fasta | chr2 | 174742592 | 174769472 |
| ghapid | grch38/chm13v2 | total | AFR | AMR | EAS | EUR | SAS | regionname | genename | chr | start | end |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| g0001 | 0/1 | 59 | 0 | 11 | 33 | 6 | 8 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| g0002 | 0/0 | 41 | 1 | 9 | 23 | 2 | 6 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| g0003 | 0/0 | 13 | 0 | 2 | 10 | 0 | 1 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| g0004 | 0/0 | 9 | 0 | 1 | 7 | 0 | 1 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| g0005 | 0/0 | 9 | 1 | 3 | 0 | 2 | 3 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| g0006 | 0/0 | 6 | 0 | 0 | 6 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| g0007 | 0/0 | 6 | 0 | 3 | 0 | 1 | 2 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| g0008 | 0/0 | 5 | 5 | 0 | 0 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| g0009 | 0/0 | 5 | 0 | 0 | 5 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| g0010 | 0/0 | 5 | 1 | 1 | 2 | 0 | 1 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| g0011 | 0/0 | 4 | 4 | 0 | 0 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| g0012 | 0/0 | 4 | 4 | 0 | 0 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| g0013 | 0/0 | 4 | 4 | 0 | 0 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| g0014 | 0/0 | 4 | 1 | 0 | 2 | 0 | 1 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| g0015 | 0/0 | 3 | 3 | 0 | 0 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| g0016 | 0/0 | 3 | 3 | 0 | 0 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| g0017 | 0/0 | 3 | 3 | 0 | 0 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| g0018 | 0/0 | 3 | 0 | 0 | 3 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| g0019 | 0/0 | 3 | 0 | 0 | 0 | 0 | 3 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| g0020 | 0/0 | 3 | 0 | 0 | 3 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| g0021 | 0/0 | 3 | 3 | 0 | 0 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| g0022 | 0/0 | 2 | 0 | 0 | 0 | 0 | 2 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| g0023 | 0/0 | 2 | 2 | 0 | 0 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| g0024 | 0/0 | 2 | 2 | 0 | 0 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| g0025 | 0/0 | 2 | 2 | 0 | 0 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| g0026 | 0/0 | 2 | 1 | 0 | 1 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| g0027 | 0/0 | 2 | 0 | 2 | 0 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| g0028 | 0/0 | 2 | 2 | 0 | 0 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| g0029 | 0/0 | 2 | 0 | 0 | 0 | 0 | 2 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| g0030 | 0/0 | 2 | 0 | 0 | 2 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| g0031 | 0/0 | 2 | 0 | 0 | 0 | 0 | 2 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| g0032 | 0/0 | 2 | 0 | 0 | 2 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| g0033 | 0/0 | 2 | 0 | 0 | 1 | 0 | 1 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| g0034 | 0/0 | 2 | 0 | 0 | 2 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| g0035 | 0/0 | 2 | 2 | 0 | 0 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| g0036 | 0/0 | 2 | 2 | 0 | 0 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| g0037 | 0/0 | 2 | 2 | 0 | 0 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| g0038 | 0/0 | 2 | 0 | 0 | 2 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| g0039 | 0/0 | 2 | 2 | 0 | 0 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| g0040 | 0/0 | 2 | 2 | 0 | 0 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| g0041 | 0/0 | 2 | 0 | 1 | 1 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| g0042 | 0/0 | 2 | 1 | 1 | 0 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| g0043 | 0/0 | 2 | 2 | 0 | 0 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| g0044 | 0/0 | 2 | 0 | 1 | 1 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| g0045 | 0/0 | 2 | 0 | 1 | 0 | 0 | 1 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| g0046 | 0/0 | 2 | 0 | 0 | 2 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| g0047 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| g0048 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| g0049 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| g0050 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| g0051 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| g0052 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| g0053 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| g0054 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| g0055 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| g0056 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| g0057 | 1/0 | 1 | 0 | 0 | 0 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| g0058 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| g0059 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| g0060 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| g0061 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| g0062 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| g0063 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| g0064 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| g0065 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| g0066 | 0/0 | 1 | 0 | 0 | 0 | 1 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| g0067 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| g0068 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| g0069 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| g0070 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| g0071 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| g0072 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| g0073 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| g0074 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| g0075 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| g0076 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| g0077 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| g0078 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| g0079 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| g0080 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| g0081 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| g0082 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| g0083 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| g0084 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| g0085 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| g0086 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| g0087 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| g0088 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| g0089 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| g0090 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| g0091 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| g0092 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| g0093 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| g0094 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| g0095 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| g0096 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| g0097 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| g0098 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| g0099 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| g0100 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| g0101 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| g0102 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| g0103 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| g0104 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| g0105 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| g0106 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| g0107 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| g0108 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| g0109 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| g0110 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| g0111 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| g0112 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| g0113 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| g0114 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| g0115 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| g0116 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| g0117 | 0/0 | 1 | 0 | 0 | 0 | 1 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| g0118 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| g0119 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| g0120 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| g0121 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| g0122 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| g0123 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| g0124 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| g0125 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| g0126 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| g0127 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| g0128 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| g0129 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| g0130 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| g0131 | 0/0 | 1 | 0 | 0 | 0 | 1 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| g0132 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| g0133 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| g0134 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| g0135 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| g0136 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| g0137 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| g0138 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| g0139 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| g0140 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| g0141 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| g0142 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| g0143 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| g0144 | 0/0 | 1 | 0 | 0 | 0 | 1 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| g0145 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| g0146 | 0/0 | 1 | 0 | 0 | 0 | 1 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| g0147 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| g0148 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| g0149 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| g0150 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| g0151 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| g0152 | 0/0 | 1 | 0 | 0 | 0 | 1 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| g0153 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| g0154 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| g0155 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| g0156 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| g0157 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| g0158 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| g0159 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| g0160 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| g0161 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| g0162 | 0/0 | 1 | 0 | 0 | 0 | 1 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| g0163 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| g0164 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| g0165 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| g0166 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| g0167 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| g0168 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| g0169 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| g0170 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| g0171 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| achapid | grch38/chm13v2 | clen | total | AFR | AMR | EAS | EUR | SAS | regionname | genename | cseq | chr | start | end |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| a0001c0001 | 1/1 | 1374 | 305 | 64 | 50 | 132 | 17 | 40 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | copy fasta | chr2 | 174742592 | 174769472 |
| a0001c0002 | 0/0 | 1374 | 42 | 11 | 7 | 17 | 1 | 6 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | copy fasta | chr2 | 174742592 | 174769472 |
| a0001c0006 | 0/0 | 1374 | 2 | 2 | 0 | 0 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | copy fasta | chr2 | 174742592 | 174769472 |
| a0001c0007 | 0/0 | 1374 | 1 | 1 | 0 | 0 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | copy fasta | chr2 | 174742592 | 174769472 |
| a0001c0013 | 0/0 | 1374 | 1 | 0 | 0 | 1 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | copy fasta | chr2 | 174742592 | 174769472 |
| a0002c0003 | 0/0 | 1374 | 8 | 8 | 0 | 0 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | copy fasta | chr2 | 174742592 | 174769472 |
| a0003c0004 | 0/0 | 1374 | 3 | 3 | 0 | 0 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | copy fasta | chr2 | 174742592 | 174769472 |
| a0004c0005 | 0/0 | 1374 | 2 | 2 | 0 | 0 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | copy fasta | chr2 | 174742592 | 174769472 |
| a0005c0014 | 0/0 | 1374 | 1 | 1 | 0 | 0 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | copy fasta | chr2 | 174742592 | 174769472 |
| a0006c0008 | 0/0 | 1374 | 1 | 0 | 0 | 1 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | copy fasta | chr2 | 174742592 | 174769472 |
| a0007c0010 | 0/0 | 1374 | 1 | 0 | 0 | 1 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | copy fasta | chr2 | 174742592 | 174769472 |
| a0008c0009 | 0/0 | 1374 | 1 | 1 | 0 | 0 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | copy fasta | chr2 | 174742592 | 174769472 |
| a0009c0011 | 0/0 | 1374 | 1 | 1 | 0 | 0 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | copy fasta | chr2 | 174742592 | 174769472 |
| a0010c0012 | 0/0 | 1374 | 1 | 0 | 1 | 0 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | copy fasta | chr2 | 174742592 | 174769472 |
| acthapid | grch38chm13v2 | tlen | total | AFR | AMR | EAS | EUR | SAS | regionname | genename | tseq | chr | start | end |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| a0001c0001t0001 | 1/1 | 1984 | 298 | 58 | 50 | 132 | 17 | 39 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | copy fasta | chr2 | 174742592 | 174769472 |
| a0001c0001t0002 | 0/0 | 1984 | 2 | 2 | 0 | 0 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | copy fasta | chr2 | 174742592 | 174769472 |
| a0001c0001t0004 | 0/0 | 1983 | 1 | 1 | 0 | 0 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | copy fasta | chr2 | 174742592 | 174769472 |
| a0001c0001t0005 | 0/0 | 1984 | 1 | 1 | 0 | 0 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | copy fasta | chr2 | 174742592 | 174769472 |
| a0001c0001t0006 | 0/0 | 1984 | 1 | 0 | 0 | 0 | 0 | 1 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | copy fasta | chr2 | 174742592 | 174769472 |
| a0001c0001t0007 | 0/0 | 1983 | 1 | 1 | 0 | 0 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | copy fasta | chr2 | 174742592 | 174769472 |
| a0001c0001t0009 | 0/0 | 1984 | 1 | 1 | 0 | 0 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | copy fasta | chr2 | 174742592 | 174769472 |
| a0001c0002t0001 | 0/0 | 1984 | 42 | 11 | 7 | 17 | 1 | 6 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | copy fasta | chr2 | 174742592 | 174769472 |
| a0001c0006t0001 | 0/0 | 1984 | 2 | 2 | 0 | 0 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | copy fasta | chr2 | 174742592 | 174769472 |
| a0001c0007t0008 | 0/0 | 1984 | 1 | 1 | 0 | 0 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | copy fasta | chr2 | 174742592 | 174769472 |
| a0001c0013t0001 | 0/0 | 1984 | 1 | 0 | 0 | 1 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | copy fasta | chr2 | 174742592 | 174769472 |
| a0002c0003t0001 | 0/0 | 1984 | 8 | 8 | 0 | 0 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | copy fasta | chr2 | 174742592 | 174769472 |
| a0003c0004t0001 | 0/0 | 1984 | 3 | 3 | 0 | 0 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | copy fasta | chr2 | 174742592 | 174769472 |
| a0004c0005t0003 | 0/0 | 1984 | 2 | 2 | 0 | 0 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | copy fasta | chr2 | 174742592 | 174769472 |
| a0005c0014t0001 | 0/0 | 1984 | 1 | 1 | 0 | 0 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | copy fasta | chr2 | 174742592 | 174769472 |
| a0006c0008t0001 | 0/0 | 1984 | 1 | 0 | 0 | 1 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | copy fasta | chr2 | 174742592 | 174769472 |
| a0007c0010t0001 | 0/0 | 1984 | 1 | 0 | 0 | 1 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | copy fasta | chr2 | 174742592 | 174769472 |
| a0008c0009t0001 | 0/0 | 1984 | 1 | 1 | 0 | 0 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | copy fasta | chr2 | 174742592 | 174769472 |
| a0009c0011t0004 | 0/0 | 1983 | 1 | 1 | 0 | 0 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | copy fasta | chr2 | 174742592 | 174769472 |
| a0010c0012t0001 | 0/0 | 1984 | 1 | 0 | 1 | 0 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | copy fasta | chr2 | 174742592 | 174769472 |
| actghapid | grch38/chm13v2 | total | AFR | AMR | EAS | EUR | SAS | regionname | genename | chr | start | end |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| a0001c0001t0001g0001 | 0/1 | 59 | 0 | 11 | 33 | 6 | 8 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| a0001c0001t0001g0002 | 0/0 | 41 | 1 | 9 | 23 | 2 | 6 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| a0001c0001t0001g0004 | 0/0 | 9 | 0 | 1 | 7 | 0 | 1 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| a0001c0001t0001g0005 | 0/0 | 9 | 1 | 3 | 0 | 2 | 3 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| a0001c0001t0001g0006 | 0/0 | 6 | 0 | 0 | 6 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| a0001c0001t0001g0007 | 0/0 | 6 | 0 | 3 | 0 | 1 | 2 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| a0001c0001t0001g0009 | 0/0 | 5 | 0 | 0 | 5 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| a0001c0001t0001g0010 | 0/0 | 5 | 1 | 1 | 2 | 0 | 1 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| a0001c0001t0001g0011 | 0/0 | 4 | 4 | 0 | 0 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| a0001c0001t0001g0012 | 0/0 | 4 | 4 | 0 | 0 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| a0001c0001t0001g0013 | 0/0 | 4 | 4 | 0 | 0 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| a0001c0001t0001g0014 | 0/0 | 4 | 1 | 0 | 2 | 0 | 1 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| a0001c0001t0001g0015 | 0/0 | 3 | 3 | 0 | 0 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| a0001c0001t0001g0017 | 0/0 | 3 | 3 | 0 | 0 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| a0001c0001t0001g0018 | 0/0 | 3 | 0 | 0 | 3 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| a0001c0001t0001g0019 | 0/0 | 3 | 0 | 0 | 0 | 0 | 3 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| a0001c0001t0001g0020 | 0/0 | 3 | 0 | 0 | 3 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| a0001c0001t0001g0021 | 0/0 | 3 | 3 | 0 | 0 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| a0001c0001t0001g0022 | 0/0 | 2 | 0 | 0 | 0 | 0 | 2 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| a0001c0001t0001g0023 | 0/0 | 2 | 2 | 0 | 0 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| a0001c0001t0001g0025 | 0/0 | 2 | 2 | 0 | 0 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| a0001c0001t0001g0029 | 0/0 | 2 | 0 | 0 | 0 | 0 | 2 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| a0001c0001t0001g0030 | 0/0 | 2 | 0 | 0 | 2 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| a0001c0001t0001g0031 | 0/0 | 2 | 0 | 0 | 0 | 0 | 2 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| a0001c0001t0001g0032 | 0/0 | 2 | 0 | 0 | 2 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| a0001c0001t0001g0033 | 0/0 | 2 | 0 | 0 | 1 | 0 | 1 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| a0001c0001t0001g0034 | 0/0 | 2 | 0 | 0 | 2 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| a0001c0001t0001g0035 | 0/0 | 2 | 2 | 0 | 0 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| a0001c0001t0001g0036 | 0/0 | 2 | 2 | 0 | 0 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| a0001c0001t0001g0038 | 0/0 | 2 | 0 | 0 | 2 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| a0001c0001t0001g0039 | 0/0 | 2 | 2 | 0 | 0 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| a0001c0001t0001g0040 | 0/0 | 2 | 2 | 0 | 0 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| a0001c0001t0001g0041 | 0/0 | 2 | 0 | 1 | 1 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| a0001c0001t0001g0042 | 0/0 | 2 | 1 | 1 | 0 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| a0001c0001t0001g0044 | 0/0 | 2 | 0 | 1 | 1 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| a0001c0001t0001g0045 | 0/0 | 2 | 0 | 1 | 0 | 0 | 1 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| a0001c0001t0001g0046 | 0/0 | 2 | 0 | 0 | 2 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| a0001c0001t0001g0048 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| a0001c0001t0001g0049 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| a0001c0001t0001g0051 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| a0001c0001t0001g0052 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| a0001c0001t0001g0053 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| a0001c0001t0001g0054 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| a0001c0001t0001g0055 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| a0001c0001t0001g0056 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| a0001c0001t0001g0057 | 1/0 | 1 | 0 | 0 | 0 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| a0001c0001t0001g0058 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| a0001c0001t0001g0060 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| a0001c0001t0001g0065 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| a0001c0001t0001g0068 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| a0001c0001t0001g0069 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| a0001c0001t0001g0081 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| a0001c0001t0001g0083 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| a0001c0001t0001g0084 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| a0001c0001t0001g0085 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| a0001c0001t0001g0086 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| a0001c0001t0001g0087 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| a0001c0001t0001g0090 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| a0001c0001t0001g0091 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| a0001c0001t0001g0094 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| a0001c0001t0001g0095 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| a0001c0001t0001g0097 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| a0001c0001t0001g0099 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| a0001c0001t0001g0100 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| a0001c0001t0001g0101 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| a0001c0001t0001g0102 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| a0001c0001t0001g0103 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| a0001c0001t0001g0104 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| a0001c0001t0001g0105 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| a0001c0001t0001g0106 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| a0001c0001t0001g0108 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| a0001c0001t0001g0110 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| a0001c0001t0001g0111 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| a0001c0001t0001g0113 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| a0001c0001t0001g0114 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| a0001c0001t0001g0115 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| a0001c0001t0001g0116 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| a0001c0001t0001g0117 | 0/0 | 1 | 0 | 0 | 0 | 1 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| a0001c0001t0001g0118 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| a0001c0001t0001g0119 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| a0001c0001t0001g0120 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| a0001c0001t0001g0121 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| a0001c0001t0001g0122 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| a0001c0001t0001g0123 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| a0001c0001t0001g0125 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| a0001c0001t0001g0127 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| a0001c0001t0001g0129 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| a0001c0001t0001g0130 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| a0001c0001t0001g0131 | 0/0 | 1 | 0 | 0 | 0 | 1 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| a0001c0001t0001g0132 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| a0001c0001t0001g0133 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| a0001c0001t0001g0134 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| a0001c0001t0001g0136 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| a0001c0001t0001g0137 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| a0001c0001t0001g0138 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| a0001c0001t0001g0139 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| a0001c0001t0001g0140 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| a0001c0001t0001g0141 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| a0001c0001t0001g0142 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| a0001c0001t0001g0143 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| a0001c0001t0001g0144 | 0/0 | 1 | 0 | 0 | 0 | 1 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| a0001c0001t0001g0145 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| a0001c0001t0001g0146 | 0/0 | 1 | 0 | 0 | 0 | 1 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| a0001c0001t0001g0147 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| a0001c0001t0001g0148 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| a0001c0001t0001g0149 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| a0001c0001t0001g0150 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| a0001c0001t0001g0151 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| a0001c0001t0001g0152 | 0/0 | 1 | 0 | 0 | 0 | 1 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| a0001c0001t0001g0153 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| a0001c0001t0001g0154 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| a0001c0001t0001g0155 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| a0001c0001t0001g0156 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| a0001c0001t0001g0157 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| a0001c0001t0001g0158 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| a0001c0001t0001g0159 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| a0001c0001t0001g0160 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| a0001c0001t0001g0161 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| a0001c0001t0001g0162 | 0/0 | 1 | 0 | 0 | 0 | 1 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| a0001c0001t0001g0164 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| a0001c0001t0001g0165 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| a0001c0001t0001g0166 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| a0001c0001t0001g0167 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| a0001c0001t0002g0050 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| a0001c0001t0002g0059 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| a0001c0001t0004g0170 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| a0001c0001t0005g0047 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| a0001c0001t0006g0126 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| a0001c0001t0007g0082 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| a0001c0001t0009g0171 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| a0001c0002t0001g0003 | 0/0 | 13 | 0 | 2 | 10 | 0 | 1 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| a0001c0002t0001g0016 | 0/0 | 3 | 3 | 0 | 0 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| a0001c0002t0001g0024 | 0/0 | 2 | 2 | 0 | 0 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| a0001c0002t0001g0026 | 0/0 | 2 | 1 | 0 | 1 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| a0001c0002t0001g0027 | 0/0 | 2 | 0 | 2 | 0 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| a0001c0002t0001g0062 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| a0001c0002t0001g0063 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| a0001c0002t0001g0064 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| a0001c0002t0001g0066 | 0/0 | 1 | 0 | 0 | 0 | 1 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| a0001c0002t0001g0067 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| a0001c0002t0001g0070 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| a0001c0002t0001g0071 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| a0001c0002t0001g0072 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| a0001c0002t0001g0073 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| a0001c0002t0001g0074 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| a0001c0002t0001g0075 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| a0001c0002t0001g0076 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| a0001c0002t0001g0077 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| a0001c0002t0001g0078 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| a0001c0002t0001g0079 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| a0001c0002t0001g0080 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| a0001c0002t0001g0088 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| a0001c0002t0001g0089 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| a0001c0002t0001g0092 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| a0001c0002t0001g0093 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| a0001c0006t0001g0043 | 0/0 | 2 | 2 | 0 | 0 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| a0001c0007t0008g0168 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| a0001c0013t0001g0163 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| a0002c0003t0001g0008 | 0/0 | 5 | 5 | 0 | 0 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| a0002c0003t0001g0061 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| a0002c0003t0001g0098 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| a0002c0003t0001g0124 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| a0003c0004t0001g0028 | 0/0 | 2 | 2 | 0 | 0 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| a0003c0004t0001g0096 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| a0004c0005t0003g0037 | 0/0 | 2 | 2 | 0 | 0 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| a0005c0014t0001g0135 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| a0006c0008t0001g0107 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| a0007c0010t0001g0109 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| a0008c0009t0001g0128 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| a0009c0011t0004g0169 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| a0010c0012t0001g0112 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| sampleid | ID haplotypeid
|
ahapid | chapid | thapid | ghapid | gpopname | popname | regionname | genename | chr | start | end |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| HG00099 | hp1 | a0001 | c0001 | t0001 | g0005 | EUR | GBR | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| HG00099 | hp2 | a0001 | c0001 | t0001 | g0001 | EUR | GBR | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| HG00140 | hp1 | a0001 | c0001 | t0001 | g0001 | EUR | GBR | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| HG00140 | hp2 | a0001 | c0001 | t0001 | g0005 | EUR | GBR | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| HG00280 | hp1 | a0001 | c0001 | t0001 | g0002 | EUR | FIN | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| HG00280 | hp2 | a0001 | c0001 | t0001 | g0001 | EUR | FIN | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| HG00323 | hp1 | a0001 | c0001 | t0001 | g0146 | EUR | FIN | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| HG00323 | hp2 | a0001 | c0001 | t0001 | g0001 | EUR | FIN | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| HG00408 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | CHS | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| HG00408 | hp2 | a0001 | c0001 | t0001 | g0009 | EAS | CHS | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| HG00423 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | CHS | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| HG00423 | hp2 | a0001 | c0001 | t0001 | g0156 | EAS | CHS | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| HG00438 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | CHS | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| HG00438 | hp2 | a0001 | c0001 | t0001 | g0001 | EAS | CHS | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| HG00558 | hp1 | a0001 | c0001 | t0001 | g0002 | EAS | CHS | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| HG00558 | hp2 | a0001 | c0001 | t0001 | g0032 | EAS | CHS | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| HG00609 | hp1 | a0001 | c0001 | t0001 | g0020 | EAS | CHS | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| HG00609 | hp2 | a0001 | c0002 | t0001 | g0003 | EAS | CHS | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| HG00621 | hp1 | a0001 | c0001 | t0001 | g0002 | EAS | CHS | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| HG00621 | hp2 | a0001 | c0001 | t0001 | g0108 | EAS | CHS | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| HG00639 | hp1 | a0001 | c0001 | t0001 | g0141 | AMR | PUR | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| HG00639 | hp2 | a0001 | c0002 | t0001 | g0067 | AMR | PUR | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| HG00642 | hp1 | a0001 | c0001 | t0001 | g0110 | AMR | PUR | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| HG00642 | hp2 | a0001 | c0001 | t0001 | g0002 | AMR | PUR | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| HG00673 | hp1 | a0001 | c0001 | t0001 | g0004 | EAS | CHS | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| HG00673 | hp2 | a0001 | c0001 | t0001 | g0123 | EAS | CHS | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| HG00735 | hp1 | a0001 | c0001 | t0001 | g0005 | AMR | PUR | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| HG00735 | hp2 | a0001 | c0001 | t0001 | g0042 | AMR | PUR | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| HG00738 | hp1 | a0001 | c0001 | t0001 | g0101 | AMR | PUR | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| HG00738 | hp2 | a0001 | c0001 | t0001 | g0151 | AMR | PUR | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| HG00741 | hp1 | a0001 | c0001 | t0001 | g0002 | AMR | PUR | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| HG00741 | hp2 | a0001 | c0001 | t0001 | g0001 | AMR | PUR | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| HG01069 | hp1 | a0001 | c0001 | t0001 | g0007 | AMR | PUR | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| HG01069 | hp2 | a0001 | c0002 | t0001 | g0003 | AMR | PUR | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| HG01070 | hp1 | a0001 | c0001 | t0001 | g0007 | AMR | PUR | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| HG01070 | hp2 | a0001 | c0001 | t0001 | g0158 | AMR | PUR | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| HG01074 | hp1 | a0001 | c0001 | t0001 | g0132 | AMR | PUR | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| HG01074 | hp2 | a0001 | c0001 | t0001 | g0007 | AMR | PUR | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| HG01081 | hp1 | a0001 | c0002 | t0001 | g0003 | AMR | PUR | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| HG01081 | hp2 | a0001 | c0001 | t0001 | g0167 | AMR | PUR | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| HG01099 | hp1 | a0001 | c0002 | t0001 | g0074 | AMR | PUR | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| HG01099 | hp2 | a0001 | c0001 | t0001 | g0001 | AMR | PUR | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| HG01106 | hp1 | a0001 | c0001 | t0001 | g0159 | AMR | PUR | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| HG01106 | hp2 | a0001 | c0001 | t0001 | g0005 | AMR | PUR | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| HG01109 | hp1 | a0001 | c0001 | t0001 | g0002 | AMR | PUR | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| HG01109 | hp2 | a0001 | c0001 | t0001 | g0148 | AMR | PUR | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| HG01167 | hp1 | a0001 | c0002 | t0001 | g0027 | AMR | PUR | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| HG01167 | hp2 | a0001 | c0001 | t0001 | g0116 | AMR | PUR | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| HG01169 | hp1 | a0001 | c0002 | t0001 | g0027 | AMR | PUR | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| HG01169 | hp2 | a0001 | c0001 | t0001 | g0104 | AMR | PUR | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| HG01175 | hp1 | a0001 | c0001 | t0001 | g0041 | AMR | PUR | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| HG01175 | hp2 | a0001 | c0001 | t0001 | g0001 | AMR | PUR | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| HG01192 | hp1 | a0001 | c0001 | t0001 | g0002 | AMR | PUR | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| HG01192 | hp2 | a0001 | c0001 | t0001 | g0001 | AMR | PUR | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| HG01243 | hp1 | a0001 | c0002 | t0001 | g0076 | AMR | PUR | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| HG01243 | hp2 | a0001 | c0001 | t0001 | g0044 | AMR | PUR | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| HG01258 | hp1 | a0010 | c0012 | t0001 | g0112 | AMR | CLM | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| HG01258 | hp2 | a0001 | c0001 | t0001 | g0004 | AMR | CLM | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| HG01261 | hp1 | a0001 | c0001 | t0001 | g0001 | AMR | CLM | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| HG01261 | hp2 | a0001 | c0001 | t0001 | g0005 | AMR | CLM | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| HG01433 | hp1 | a0001 | c0001 | t0001 | g0115 | AMR | CLM | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| HG01433 | hp2 | a0001 | c0001 | t0001 | g0001 | AMR | CLM | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| HG01496 | hp1 | a0001 | c0001 | t0001 | g0085 | AMR | CLM | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| HG01496 | hp2 | a0001 | c0001 | t0001 | g0010 | AMR | CLM | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| HG01515 | hp1 | a0001 | c0001 | t0001 | g0001 | EUR | IBS | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| HG01515 | hp2 | a0001 | c0001 | t0001 | g0144 | EUR | IBS | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| HG01516 | hp1 | a0001 | c0001 | t0001 | g0117 | EUR | IBS | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| HG01516 | hp2 | a0001 | c0001 | t0001 | g0002 | EUR | IBS | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| HG01517 | hp1 | a0001 | c0001 | t0001 | g0007 | EUR | IBS | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| HG01517 | hp2 | a0001 | c0001 | t0001 | g0001 | EUR | IBS | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| HG01884 | hp1 | a0001 | c0002 | t0001 | g0026 | AFR | ACB | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| HG01884 | hp2 | a0001 | c0001 | t0001 | g0090 | AFR | ACB | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| HG01891 | hp1 | a0001 | c0001 | t0001 | g0021 | AFR | ACB | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| HG01891 | hp2 | a0001 | c0001 | t0002 | g0050 | AFR | ACB | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| HG01928 | hp1 | a0001 | c0001 | t0001 | g0105 | AMR | PEL | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| HG01928 | hp2 | a0001 | c0001 | t0001 | g0002 | AMR | PEL | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| HG01943 | hp1 | a0001 | c0001 | t0001 | g0002 | AMR | PEL | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| HG01943 | hp2 | a0001 | c0001 | t0001 | g0001 | AMR | PEL | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| HG01952 | hp1 | a0001 | c0001 | t0001 | g0002 | AMR | PEL | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| HG01952 | hp2 | a0001 | c0001 | t0001 | g0001 | AMR | PEL | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| HG01975 | hp1 | a0001 | c0001 | t0001 | g0161 | AMR | PEL | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| HG01975 | hp2 | a0001 | c0001 | t0001 | g0001 | AMR | PEL | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| HG01993 | hp1 | a0001 | c0001 | t0001 | g0001 | AMR | PEL | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| HG01993 | hp2 | a0001 | c0001 | t0001 | g0143 | AMR | PEL | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| HG02015 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | KHV | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| HG02015 | hp2 | a0001 | c0001 | t0001 | g0121 | EAS | KHV | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| HG02040 | hp1 | a0001 | c0001 | t0001 | g0136 | EAS | KHV | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| HG02040 | hp2 | a0001 | c0001 | t0001 | g0010 | EAS | KHV | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| HG02055 | hp1 | a0002 | c0003 | t0001 | g0061 | AFR | ACB | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| HG02055 | hp2 | a0001 | c0002 | t0001 | g0024 | AFR | ACB | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| HG02071 | hp1 | a0001 | c0001 | t0001 | g0009 | EAS | KHV | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| HG02071 | hp2 | a0001 | c0001 | t0001 | g0120 | EAS | KHV | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| HG02074 | hp1 | a0001 | c0001 | t0001 | g0002 | EAS | KHV | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| HG02074 | hp2 | a0001 | c0001 | t0001 | g0001 | EAS | KHV | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| HG02083 | hp1 | a0001 | c0002 | t0001 | g0077 | EAS | KHV | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| HG02083 | hp2 | a0001 | c0001 | t0001 | g0033 | EAS | KHV | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| HG02129 | hp1 | a0001 | c0001 | t0001 | g0004 | EAS | KHV | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| HG02129 | hp2 | a0001 | c0002 | t0001 | g0003 | EAS | KHV | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| HG02132 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | KHV | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| HG02132 | hp2 | a0001 | c0001 | t0001 | g0018 | EAS | KHV | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| HG02135 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | KHV | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| HG02135 | hp2 | a0001 | c0002 | t0001 | g0003 | EAS | KHV | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| HG02155 | hp1 | a0001 | c0001 | t0001 | g0004 | EAS | CDX | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| HG02155 | hp2 | a0001 | c0001 | t0001 | g0020 | EAS | CDX | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| HG02257 | hp1 | a0001 | c0002 | t0001 | g0016 | AFR | ACB | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| HG02257 | hp2 | a0001 | c0001 | t0004 | g0170 | AFR | ACB | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| HG02258 | hp1 | a0004 | c0005 | t0003 | g0037 | AFR | ACB | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| HG02258 | hp2 | a0001 | c0001 | t0001 | g0015 | AFR | ACB | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| HG02280 | hp1 | a0002 | c0003 | t0001 | g0008 | AFR | ACB | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| HG02280 | hp2 | a0001 | c0001 | t0001 | g0025 | AFR | ACB | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| HG02293 | hp1 | a0001 | c0001 | t0001 | g0001 | AMR | PEL | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| HG02293 | hp2 | a0001 | c0001 | t0001 | g0002 | AMR | PEL | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| HG02300 | hp1 | a0001 | c0001 | t0001 | g0045 | AMR | PEL | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| HG02300 | hp2 | a0001 | c0001 | t0001 | g0002 | AMR | PEL | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| HG02451 | hp1 | a0001 | c0001 | t0001 | g0068 | AFR | ACB | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| HG02451 | hp2 | a0001 | c0001 | t0001 | g0036 | AFR | ACB | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| HG02523 | hp1 | a0001 | c0001 | t0001 | g0032 | EAS | KHV | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| HG02523 | hp2 | a0001 | c0013 | t0001 | g0163 | EAS | KHV | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| HG02572 | hp1 | a0001 | c0001 | t0001 | g0021 | AFR | GWD | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| HG02572 | hp2 | a0008 | c0009 | t0001 | g0128 | AFR | GWD | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| HG02615 | hp1 | a0001 | c0001 | t0001 | g0084 | AFR | GWD | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| HG02615 | hp2 | a0001 | c0001 | t0001 | g0138 | AFR | GWD | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| HG02630 | hp1 | a0001 | c0001 | t0001 | g0010 | AFR | GWD | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| HG02630 | hp2 | a0001 | c0006 | t0001 | g0043 | AFR | GWD | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| HG02647 | hp1 | a0001 | c0002 | t0001 | g0079 | AFR | GWD | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| HG02647 | hp2 | a0001 | c0001 | t0001 | g0017 | AFR | GWD | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| HG02683 | hp1 | a0001 | c0001 | t0001 | g0007 | SAS | PJL | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| HG02683 | hp2 | a0001 | c0001 | t0001 | g0001 | SAS | PJL | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| HG02698 | hp1 | a0001 | c0002 | t0001 | g0003 | SAS | PJL | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| HG02698 | hp2 | a0001 | c0001 | t0001 | g0081 | SAS | PJL | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| HG02717 | hp1 | a0001 | c0006 | t0001 | g0043 | AFR | GWD | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| HG02717 | hp2 | a0003 | c0004 | t0001 | g0028 | AFR | GWD | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| HG02723 | hp1 | a0002 | c0003 | t0001 | g0008 | AFR | GWD | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| HG02723 | hp2 | a0001 | c0001 | t0001 | g0021 | AFR | GWD | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| HG02735 | hp1 | a0001 | c0001 | t0001 | g0002 | SAS | PJL | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| HG02735 | hp2 | a0001 | c0001 | t0001 | g0005 | SAS | PJL | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| HG02738 | hp1 | a0001 | c0001 | t0001 | g0114 | SAS | PJL | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| HG02738 | hp2 | a0001 | c0001 | t0001 | g0019 | SAS | PJL | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| HG02809 | hp1 | a0001 | c0001 | t0001 | g0039 | AFR | GWD | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| HG02809 | hp2 | a0001 | c0001 | t0001 | g0036 | AFR | GWD | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| HG02818 | hp1 | a0001 | c0001 | t0005 | g0047 | AFR | GWD | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| HG02818 | hp2 | a0001 | c0001 | t0001 | g0002 | AFR | GWD | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| HG02886 | hp1 | a0001 | c0001 | t0001 | g0011 | AFR | GWD | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| HG02886 | hp2 | a0001 | c0001 | t0001 | g0042 | AFR | GWD | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| HG02895 | hp1 | a0001 | c0001 | t0001 | g0013 | AFR | GWD | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| HG02895 | hp2 | a0001 | c0001 | t0002 | g0059 | AFR | GWD | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| HG02896 | hp1 | a0001 | c0001 | t0001 | g0040 | AFR | GWD | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| HG02896 | hp2 | a0001 | c0002 | t0001 | g0016 | AFR | GWD | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| HG02897 | hp1 | a0001 | c0001 | t0001 | g0013 | AFR | GWD | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| HG02897 | hp2 | a0001 | c0001 | t0001 | g0040 | AFR | GWD | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| HG02922 | hp1 | a0001 | c0002 | t0001 | g0063 | AFR | ESN | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| HG02922 | hp2 | a0001 | c0001 | t0001 | g0035 | AFR | ESN | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| HG02965 | hp1 | a0001 | c0002 | t0001 | g0062 | AFR | ESN | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| HG02965 | hp2 | a0001 | c0001 | t0001 | g0099 | AFR | ESN | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| HG02970 | hp1 | a0001 | c0002 | t0001 | g0089 | AFR | ESN | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| HG02970 | hp2 | a0001 | c0001 | t0001 | g0011 | AFR | ESN | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| HG02976 | hp1 | a0001 | c0001 | t0001 | g0069 | AFR | ESN | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| HG02976 | hp2 | a0001 | c0001 | t0001 | g0013 | AFR | ESN | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| HG03017 | hp1 | a0001 | c0001 | t0001 | g0033 | SAS | PJL | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| HG03017 | hp2 | a0001 | c0001 | t0001 | g0002 | SAS | PJL | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| HG03041 | hp1 | a0002 | c0003 | t0001 | g0098 | AFR | GWD | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| HG03041 | hp2 | a0001 | c0001 | t0001 | g0058 | AFR | GWD | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| HG03098 | hp1 | a0001 | c0001 | t0001 | g0060 | AFR | MSL | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| HG03098 | hp2 | a0009 | c0011 | t0004 | g0169 | AFR | MSL | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| HG03130 | hp1 | a0001 | c0001 | t0001 | g0015 | AFR | ESN | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| HG03130 | hp2 | a0002 | c0003 | t0001 | g0008 | AFR | ESN | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| HG03139 | hp1 | a0001 | c0001 | t0001 | g0011 | AFR | ESN | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| HG03139 | hp2 | a0001 | c0001 | t0001 | g0035 | AFR | ESN | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| HG03209 | hp1 | a0001 | c0001 | t0001 | g0129 | AFR | MSL | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| HG03209 | hp2 | a0001 | c0001 | t0001 | g0086 | AFR | MSL | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| HG03225 | hp1 | a0001 | c0001 | t0001 | g0014 | AFR | MSL | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| HG03225 | hp2 | a0001 | c0001 | t0001 | g0127 | AFR | MSL | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| HG03239 | hp1 | a0001 | c0001 | t0001 | g0010 | SAS | PJL | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| HG03239 | hp2 | a0001 | c0001 | t0001 | g0045 | SAS | PJL | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| HG03453 | hp1 | a0001 | c0001 | t0001 | g0065 | AFR | MSL | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| HG03453 | hp2 | a0001 | c0001 | t0009 | g0171 | AFR | MSL | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| HG03486 | hp1 | a0002 | c0003 | t0001 | g0124 | AFR | MSL | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| HG03486 | hp2 | a0001 | c0001 | t0001 | g0023 | AFR | MSL | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| HG03490 | hp1 | a0001 | c0001 | t0001 | g0002 | SAS | PJL | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| HG03490 | hp2 | a0001 | c0001 | t0001 | g0005 | SAS | PJL | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| HG03491 | hp1 | a0001 | c0001 | t0001 | g0022 | SAS | PJL | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| HG03491 | hp2 | a0001 | c0001 | t0001 | g0019 | SAS | PJL | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| HG03492 | hp1 | a0001 | c0001 | t0001 | g0022 | SAS | PJL | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| HG03492 | hp2 | a0001 | c0001 | t0001 | g0005 | SAS | PJL | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| HG03516 | hp1 | a0001 | c0001 | t0001 | g0025 | AFR | ESN | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| HG03516 | hp2 | a0001 | c0001 | t0001 | g0091 | AFR | ESN | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| HG03540 | hp1 | a0001 | c0001 | t0001 | g0005 | AFR | GWD | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| HG03540 | hp2 | a0001 | c0001 | t0001 | g0039 | AFR | GWD | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| HG03579 | hp1 | a0004 | c0005 | t0003 | g0037 | AFR | MSL | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| HG03579 | hp2 | a0005 | c0014 | t0001 | g0135 | AFR | MSL | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| HG03654 | hp1 | a0001 | c0001 | t0001 | g0001 | SAS | PJL | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| HG03654 | hp2 | a0001 | c0001 | t0001 | g0002 | SAS | PJL | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| HG03669 | hp1 | a0001 | c0001 | t0001 | g0029 | SAS | PJL | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| HG03669 | hp2 | a0001 | c0001 | t0001 | g0160 | SAS | PJL | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| HG03688 | hp1 | a0001 | c0001 | t0001 | g0001 | SAS | STU | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| HG03688 | hp2 | a0001 | c0001 | t0001 | g0029 | SAS | STU | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| HG03704 | hp1 | a0001 | c0002 | t0001 | g0088 | SAS | PJL | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| HG03704 | hp2 | a0001 | c0001 | t0001 | g0001 | SAS | PJL | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| HG03710 | hp1 | a0001 | c0001 | t0001 | g0014 | SAS | PJL | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| HG03710 | hp2 | a0001 | c0001 | t0001 | g0094 | SAS | PJL | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| HG03831 | hp1 | a0001 | c0001 | t0001 | g0001 | SAS | BEB | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| HG03831 | hp2 | a0001 | c0002 | t0001 | g0073 | SAS | BEB | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| HG03834 | hp1 | a0001 | c0001 | t0001 | g0001 | SAS | BEB | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| HG03834 | hp2 | a0001 | c0001 | t0001 | g0002 | SAS | BEB | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| HG03927 | hp1 | a0001 | c0001 | t0001 | g0019 | SAS | BEB | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| HG03927 | hp2 | a0001 | c0001 | t0001 | g0004 | SAS | BEB | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| HG03942 | hp1 | a0001 | c0001 | t0001 | g0031 | SAS | BEB | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| HG03942 | hp2 | a0001 | c0001 | t0001 | g0001 | SAS | BEB | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| HG04184 | hp1 | a0001 | c0002 | t0001 | g0070 | SAS | BEB | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| HG04184 | hp2 | a0001 | c0001 | t0001 | g0166 | SAS | BEB | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| HG04199 | hp1 | a0001 | c0001 | t0001 | g0007 | SAS | STU | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| HG04199 | hp2 | a0001 | c0001 | t0001 | g0001 | SAS | STU | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| HG04204 | hp1 | a0001 | c0001 | t0001 | g0149 | SAS | STU | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| HG04204 | hp2 | a0001 | c0002 | t0001 | g0071 | SAS | STU | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| HG04228 | hp1 | a0001 | c0001 | t0001 | g0031 | SAS | STU | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| HG04228 | hp2 | a0001 | c0001 | t0001 | g0002 | SAS | STU | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| NA18522 | hp1 | a0001 | c0001 | t0001 | g0083 | AFR | YRI | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| NA18522 | hp2 | a0001 | c0001 | t0001 | g0011 | AFR | YRI | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| NA18612 | hp1 | a0001 | c0001 | t0001 | g0009 | EAS | CHB | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| NA18612 | hp2 | a0001 | c0001 | t0001 | g0018 | EAS | CHB | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| NA18747 | hp1 | a0001 | c0001 | t0001 | g0018 | EAS | CHB | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| NA18747 | hp2 | a0001 | c0001 | t0001 | g0049 | EAS | CHB | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| NA18906 | hp1 | a0002 | c0003 | t0001 | g0008 | AFR | YRI | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| NA18906 | hp2 | a0001 | c0001 | t0001 | g0015 | AFR | YRI | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| NA18940 | hp1 | a0001 | c0001 | t0001 | g0004 | EAS | JPT | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| NA18940 | hp2 | a0001 | c0001 | t0001 | g0154 | EAS | JPT | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| NA18941 | hp1 | a0001 | c0002 | t0001 | g0003 | EAS | JPT | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| NA18941 | hp2 | a0001 | c0001 | t0001 | g0155 | EAS | JPT | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| NA18942 | hp1 | a0001 | c0001 | t0001 | g0002 | EAS | JPT | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| NA18942 | hp2 | a0001 | c0001 | t0001 | g0111 | EAS | JPT | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| NA18943 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| NA18943 | hp2 | a0001 | c0001 | t0001 | g0006 | EAS | JPT | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| NA18944 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| NA18944 | hp2 | a0001 | c0001 | t0001 | g0002 | EAS | JPT | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| NA18946 | hp1 | a0001 | c0001 | t0001 | g0002 | EAS | JPT | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| NA18946 | hp2 | a0001 | c0002 | t0001 | g0026 | EAS | JPT | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| NA18948 | hp1 | a0001 | c0001 | t0001 | g0054 | EAS | JPT | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| NA18948 | hp2 | a0001 | c0001 | t0001 | g0002 | EAS | JPT | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| NA18951 | hp1 | a0001 | c0001 | t0001 | g0165 | EAS | JPT | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| NA18951 | hp2 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| NA18953 | hp1 | a0001 | c0001 | t0001 | g0020 | EAS | JPT | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| NA18953 | hp2 | a0001 | c0001 | t0001 | g0164 | EAS | JPT | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| NA18954 | hp1 | a0001 | c0001 | t0001 | g0137 | EAS | JPT | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| NA18954 | hp2 | a0001 | c0001 | t0001 | g0004 | EAS | JPT | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| NA18956 | hp1 | a0001 | c0001 | t0001 | g0002 | EAS | JPT | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| NA18956 | hp2 | a0001 | c0002 | t0001 | g0003 | EAS | JPT | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| NA18957 | hp1 | a0001 | c0001 | t0001 | g0147 | EAS | JPT | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| NA18957 | hp2 | a0001 | c0001 | t0001 | g0103 | EAS | JPT | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| NA18962 | hp1 | a0001 | c0001 | t0001 | g0140 | EAS | JPT | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| NA18962 | hp2 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| NA18963 | hp1 | a0001 | c0001 | t0001 | g0038 | EAS | JPT | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| NA18963 | hp2 | a0001 | c0002 | t0001 | g0003 | EAS | JPT | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| NA18964 | hp1 | a0001 | c0001 | t0001 | g0009 | EAS | JPT | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| NA18964 | hp2 | a0001 | c0001 | t0001 | g0113 | EAS | JPT | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| NA18965 | hp1 | a0001 | c0001 | t0001 | g0014 | EAS | JPT | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| NA18965 | hp2 | a0001 | c0001 | t0001 | g0006 | EAS | JPT | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| NA18968 | hp1 | a0001 | c0001 | t0001 | g0004 | EAS | JPT | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| NA18968 | hp2 | a0001 | c0002 | t0001 | g0075 | EAS | JPT | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| NA18970 | hp1 | a0001 | c0001 | t0001 | g0142 | EAS | JPT | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| NA18970 | hp2 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| NA18971 | hp1 | a0006 | c0008 | t0001 | g0107 | EAS | JPT | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| NA18971 | hp2 | a0001 | c0001 | t0001 | g0002 | EAS | JPT | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| NA18972 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| NA18972 | hp2 | a0001 | c0002 | t0001 | g0003 | EAS | JPT | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| NA18974 | hp1 | a0001 | c0002 | t0001 | g0003 | EAS | JPT | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| NA18974 | hp2 | a0001 | c0001 | t0001 | g0044 | EAS | JPT | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| NA18975 | hp1 | a0001 | c0001 | t0001 | g0145 | EAS | JPT | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| NA18975 | hp2 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| NA18976 | hp1 | a0001 | c0001 | t0001 | g0056 | EAS | JPT | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| NA18976 | hp2 | a0001 | c0001 | t0001 | g0095 | EAS | JPT | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| NA18977 | hp1 | a0001 | c0001 | t0001 | g0002 | EAS | JPT | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| NA18977 | hp2 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| NA18978 | hp1 | a0001 | c0001 | t0001 | g0048 | EAS | JPT | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| NA18978 | hp2 | a0001 | c0001 | t0001 | g0002 | EAS | JPT | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| NA18979 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| NA18979 | hp2 | a0001 | c0001 | t0001 | g0046 | EAS | JPT | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| NA18980 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| NA18980 | hp2 | a0001 | c0001 | t0001 | g0002 | EAS | JPT | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| NA18982 | hp1 | a0007 | c0010 | t0001 | g0109 | EAS | JPT | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| NA18982 | hp2 | a0001 | c0001 | t0001 | g0125 | EAS | JPT | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| NA18987 | hp1 | a0001 | c0001 | t0001 | g0038 | EAS | JPT | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| NA18987 | hp2 | a0001 | c0001 | t0001 | g0052 | EAS | JPT | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| NA18991 | hp1 | a0001 | c0001 | t0001 | g0006 | EAS | JPT | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| NA18991 | hp2 | a0001 | c0002 | t0001 | g0092 | EAS | JPT | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| NA18992 | hp1 | a0001 | c0001 | t0001 | g0119 | EAS | JPT | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| NA18992 | hp2 | a0001 | c0001 | t0001 | g0002 | EAS | JPT | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| NA18997 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| NA18997 | hp2 | a0001 | c0001 | t0001 | g0006 | EAS | JPT | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| NA18998 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| NA18998 | hp2 | a0001 | c0001 | t0001 | g0055 | EAS | JPT | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| NA18999 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| NA18999 | hp2 | a0001 | c0001 | t0001 | g0051 | EAS | JPT | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| NA19002 | hp1 | a0001 | c0001 | t0001 | g0014 | EAS | JPT | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| NA19002 | hp2 | a0001 | c0001 | t0001 | g0130 | EAS | JPT | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| NA19003 | hp1 | a0001 | c0001 | t0001 | g0034 | EAS | JPT | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| NA19003 | hp2 | a0001 | c0001 | t0001 | g0002 | EAS | JPT | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| NA19005 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| NA19005 | hp2 | a0001 | c0002 | t0001 | g0093 | EAS | JPT | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| NA19007 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| NA19007 | hp2 | a0001 | c0001 | t0001 | g0002 | EAS | JPT | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| NA19009 | hp1 | a0001 | c0001 | t0001 | g0150 | EAS | JPT | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| NA19009 | hp2 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| NA19010 | hp1 | a0001 | c0001 | t0001 | g0034 | EAS | JPT | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| NA19010 | hp2 | a0001 | c0001 | t0001 | g0010 | EAS | JPT | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| NA19030 | hp1 | a0001 | c0001 | t0001 | g0013 | AFR | LWK | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| NA19030 | hp2 | a0001 | c0002 | t0001 | g0016 | AFR | LWK | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| NA19043 | hp1 | a0001 | c0001 | t0001 | g0133 | AFR | LWK | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| NA19043 | hp2 | a0001 | c0001 | t0001 | g0023 | AFR | LWK | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| NA19057 | hp1 | a0001 | c0001 | t0001 | g0157 | EAS | JPT | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| NA19057 | hp2 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| NA19060 | hp1 | a0001 | c0001 | t0001 | g0046 | EAS | JPT | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| NA19060 | hp2 | a0001 | c0001 | t0001 | g0002 | EAS | JPT | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| NA19062 | hp1 | a0001 | c0001 | t0001 | g0030 | EAS | JPT | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| NA19062 | hp2 | a0001 | c0002 | t0001 | g0080 | EAS | JPT | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| NA19065 | hp1 | a0001 | c0001 | t0001 | g0004 | EAS | JPT | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| NA19065 | hp2 | a0001 | c0002 | t0001 | g0003 | EAS | JPT | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| NA19066 | hp1 | a0001 | c0001 | t0001 | g0002 | EAS | JPT | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| NA19066 | hp2 | a0001 | c0002 | t0001 | g0003 | EAS | JPT | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| NA19068 | hp1 | a0001 | c0001 | t0001 | g0002 | EAS | JPT | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| NA19068 | hp2 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| NA19074 | hp1 | a0001 | c0001 | t0001 | g0002 | EAS | JPT | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| NA19074 | hp2 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| NA19075 | hp1 | a0001 | c0002 | t0001 | g0078 | EAS | JPT | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| NA19075 | hp2 | a0001 | c0001 | t0001 | g0009 | EAS | JPT | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| NA19077 | hp1 | a0001 | c0001 | t0001 | g0030 | EAS | JPT | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| NA19077 | hp2 | a0001 | c0001 | t0001 | g0006 | EAS | JPT | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| NA19081 | hp1 | a0001 | c0001 | t0001 | g0100 | EAS | JPT | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| NA19081 | hp2 | a0001 | c0001 | t0001 | g0002 | EAS | JPT | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| NA19082 | hp1 | a0001 | c0001 | t0001 | g0106 | EAS | JPT | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| NA19082 | hp2 | a0001 | c0001 | t0001 | g0053 | EAS | JPT | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| NA19084 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| NA19084 | hp2 | a0001 | c0001 | t0001 | g0041 | EAS | JPT | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| NA19085 | hp1 | a0001 | c0001 | t0001 | g0122 | EAS | JPT | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| NA19085 | hp2 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| NA19086 | hp1 | a0001 | c0001 | t0001 | g0002 | EAS | JPT | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| NA19086 | hp2 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| NA19087 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| NA19087 | hp2 | a0001 | c0001 | t0001 | g0002 | EAS | JPT | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| NA19089 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| NA19089 | hp2 | a0001 | c0001 | t0001 | g0002 | EAS | JPT | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| NA19090 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| NA19090 | hp2 | a0001 | c0001 | t0001 | g0006 | EAS | JPT | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| NA19240 | hp1 | a0001 | c0001 | t0001 | g0102 | AFR | YRI | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| NA19240 | hp2 | a0001 | c0001 | t0001 | g0012 | AFR | YRI | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| NA20129 | hp1 | a0001 | c0001 | t0001 | g0012 | AFR | ASW | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| NA20129 | hp2 | a0001 | c0001 | t0001 | g0134 | AFR | ASW | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| NA20752 | hp1 | a0001 | c0002 | t0001 | g0066 | EUR | TSI | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| NA20752 | hp2 | a0001 | c0001 | t0001 | g0152 | EUR | TSI | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| NA20805 | hp1 | a0001 | c0001 | t0001 | g0162 | EUR | TSI | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| NA20805 | hp2 | a0001 | c0001 | t0001 | g0131 | EUR | TSI | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| NA20905 | hp1 | a0001 | c0002 | t0001 | g0072 | SAS | GIH | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| NA20905 | hp2 | a0001 | c0001 | t0006 | g0126 | SAS | GIH | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| HG01123 | hp1 | a0001 | c0001 | t0001 | g0153 | AMR | CLM | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| HG01123 | hp2 | a0001 | c0001 | t0001 | g0097 | AMR | CLM | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| HG02109 | hp1 | a0001 | c0001 | t0001 | g0012 | AFR | ACB | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| HG02109 | hp2 | a0001 | c0001 | t0001 | g0017 | AFR | ACB | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| HG02486 | hp1 | a0001 | c0001 | t0007 | g0082 | AFR | ACB | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| HG02486 | hp2 | a0001 | c0001 | t0001 | g0139 | AFR | ACB | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| HG02559 | hp1 | a0001 | c0002 | t0001 | g0064 | AFR | ACB | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| HG02559 | hp2 | a0003 | c0004 | t0001 | g0096 | AFR | ACB | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| HG03471 | hp1 | a0001 | c0001 | t0001 | g0087 | AFR | MSL | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| HG03471 | hp2 | a0003 | c0004 | t0001 | g0028 | AFR | MSL | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| HG06807 | hp1 | a0001 | c0001 | t0001 | g0012 | AFR | USA | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| HG06807 | hp2 | a0001 | c0002 | t0001 | g0024 | AFR | USA | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| NA20300 | hp1 | a0001 | c0001 | t0001 | g0017 | AFR | USA | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| NA20300 | hp2 | a0002 | c0003 | t0001 | g0008 | AFR | USA | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| NA21309 | hp1 | a0001 | c0001 | t0001 | g0118 | AFR | LWK | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| NA21309 | hp2 | a0001 | c0007 | t0008 | g0168 | AFR | LWK | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| homoSapiens_chm13v2 | hp1 | a0001 | c0001 | t0001 | g0001 | REF | REF | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| homoSapiens_grch38 | hp1 | a0001 | c0001 | t0001 | g0057 | REF | REF | CHRNA1_chr2_174742592_174769472 | CHRNA1 | chr2 | 174742592 | 174769472 |
| chr:pos | ref | alt | # # of ahapid:amino-acid(protein) level |
ahapids | # # of haplotypeids |
haplotypeids | annotation | impact | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length |
cds cds pos length |
aa aa pos length |
distance | status | chr | pos |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
chr2:174748589
|
C | A | 1 | a0004 | 2 | HG02258.hp1 HG03579.hp1 |
missense_variant | MODERATE | c.1233G>T | p.Glu411Asp | CHRNA1 | ENSG00000138435.16 | transcript | ENST00000348749.9 | protein_coding | 8/9 | 1311/1984 | 1233/1374 | 411/457 | chr2 | 174748589 | ||
|
chr2:174748681
|
C | T | 1 | a0007 | 1 | NA18982.hp1 | missense_variant | MODERATE | c.1141G>A | p.Gly381Ser | CHRNA1 | ENSG00000138435.16 | transcript | ENST00000348749.9 | protein_coding | 8/9 | 1219/1984 | 1141/1374 | 381/457 | chr2 | 174748681 | ||
|
chr2:174748683
|
A | G | 1 | a0008 | 1 | HG02572.hp2 | missense_variant | MODERATE | c.1139T>C | p.Met380Thr | CHRNA1 | ENSG00000138435.16 | transcript | ENST00000348749.9 | protein_coding | 8/9 | 1217/1984 | 1139/1374 | 380/457 | chr2 | 174748683 | ||
|
chr2:174748749
|
T | A | 1 | a0002 | 8 | HG02055.hp1 HG02280.hp1 HG02723.hp1 others(5): Show |
missense_variant | MODERATE | c.1073A>T | p.Asp358Val | CHRNA1 | ENSG00000138435.16 | transcript | ENST00000348749.9 | protein_coding | 8/9 | 1151/1984 | 1073/1374 | 358/457 | chr2 | 174748749 | ||
|
chr2:174748755
|
T | G | 1 | a0009 | 1 | HG03098.hp2 | missense_variant | MODERATE | c.1067A>C | p.Lys356Thr | CHRNA1 | ENSG00000138435.16 | transcript | ENST00000348749.9 | protein_coding | 8/9 | 1145/1984 | 1067/1374 | 356/457 | chr2 | 174748755 | ||
|
chr2:174750056
|
T | C | 1 | a0010 | 1 | HG01258.hp1 | missense_variant | MODERATE | c.892A>G | p.Met298Val | CHRNA1 | ENSG00000138435.16 | transcript | ENST00000348749.9 | protein_coding | 7/9 | 970/1984 | 892/1374 | 298/457 | chr2 | 174750056 | ||
|
chr2:174753605
|
C | T | 1 | a0006 | 1 | NA18971.hp1 | missense_variant | MODERATE | c.676G>A | p.Val226Ile | CHRNA1 | ENSG00000138435.16 | transcript | ENST00000348749.9 | protein_coding | 6/9 | 754/1984 | 676/1374 | 226/457 | chr2 | 174753605 | ||
|
chr2:174753638
|
C | T | 1 | a0003 | 3 | HG02559.hp2 HG02717.hp2 HG03471.hp2 |
missense_variant | MODERATE | c.643G>A | p.Asp215Asn | CHRNA1 | ENSG00000138435.16 | transcript | ENST00000348749.9 | protein_coding | 6/9 | 721/1984 | 643/1374 | 215/457 | chr2 | 174753638 | ||
|
chr2:174757591
|
G | A | 1 | a0005 | 1 | HG03579.hp2 | missense_variant | MODERATE | c.319C>T | p.Arg107Cys | CHRNA1 | ENSG00000138435.16 | transcript | ENST00000348749.9 | protein_coding | 4/9 | 397/1984 | 319/1374 | 107/457 | chr2 | 174757591 |
| chr:pos | ref | alt | # # of chapid |
chapids | # # of haplotypeids |
haplotypeids | annotation | impact | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length |
cds cds pos length |
aa aa pos length |
distance | status | chr | pos |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
chr2:174749988
|
G | A | 2 | a0001c0002a0001c0007 | 43 | HG00609.hp2 HG00639.hp2 HG01069.hp2 others(40): Show |
synonymous_variant | LOW | c.960C>T | p.His320His | CHRNA1 | ENSG00000138435.16 | transcript | ENST00000348749.9 | protein_coding | 7/9 | 1038/1984 | 960/1374 | 320/457 | chr2 | 174749988 | ||
|
chr2:174753624
|
C | G | 1 | a0001c0007 | 1 | NA21309.hp2 | synonymous_variant | LOW | c.657G>C | p.Leu219Leu | CHRNA1 | ENSG00000138435.16 | transcript | ENST00000348749.9 | protein_coding | 6/9 | 735/1984 | 657/1374 | 219/457 | chr2 | 174753624 | ||
|
chr2:174753660
|
G | A | 1 | a0001c0013 | 1 | HG02523.hp2 | synonymous_variant | LOW | c.621C>T | p.Ser207Ser | CHRNA1 | ENSG00000138435.16 | transcript | ENST00000348749.9 | protein_coding | 6/9 | 699/1984 | 621/1374 | 207/457 | chr2 | 174753660 | ||
|
chr2:174753702
|
G | A | 1 | a0001c0006 | 2 | HG02630.hp2 HG02717.hp1 |
synonymous_variant | LOW | c.579C>T | p.Ser193Ser | CHRNA1 | ENSG00000138435.16 | transcript | ENST00000348749.9 | protein_coding | 6/9 | 657/1984 | 579/1374 | 193/457 | chr2 | 174753702 |
| chr:pos | ref | alt | # # of thapid:transcript level |
thapids | # # of haplotypeids |
haplotypeids | annotation | impact | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length |
cds cds pos length |
aa aa pos length |
distance | status | chr | pos |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
chr2:174747694
|
AG | A | 3 | a0001c0001t0004a0001c0001t0007a0009c0011t0004 | 3 | HG02257.hp2 HG02486.hp1 HG03098.hp2 |
3_prime_UTR_variant | MODIFIER | c.*429delC | CHRNA1 | ENSG00000138435.16 | transcript | ENST00000348749.9 | protein_coding | 9/9 | 429 | chr2 | 174747694 | |||||
|
chr2:174747698
|
G | T | 1 | a0001c0001t0002 | 2 | HG01891.hp2 HG02895.hp2 |
3_prime_UTR_variant | MODIFIER | c.*426C>A | CHRNA1 | ENSG00000138435.16 | transcript | ENST00000348749.9 | protein_coding | 9/9 | 426 | chr2 | 174747698 | |||||
|
chr2:174747836
|
C | T | 1 | a0001c0001t0006 | 1 | NA20905.hp2 | 3_prime_UTR_variant | MODIFIER | c.*288G>A | CHRNA1 | ENSG00000138435.16 | transcript | ENST00000348749.9 | protein_coding | 9/9 | 288 | chr2 | 174747836 | |||||
|
chr2:174747906
|
G | A | 1 | a0004c0005t0003 | 2 | HG02258.hp1 HG03579.hp1 |
3_prime_UTR_variant | MODIFIER | c.*218C>T | CHRNA1 | ENSG00000138435.16 | transcript | ENST00000348749.9 | protein_coding | 9/9 | 218 | chr2 | 174747906 | |||||
|
chr2:174764402
|
C | T | 1 | a0001c0001t0005 | 1 | HG02818.hp1 | 5_prime_UTR_variant | MODIFIER | c.-8G>A | CHRNA1 | ENSG00000138435.16 | transcript | ENST00000348749.9 | protein_coding | 1/9 | 8 | chr2 | 174764402 | |||||
|
chr2:174764403
|
G | A | 1 | a0001c0007t0008 | 1 | NA21309.hp2 | 5_prime_UTR_premature_start_codon_gain_variant | LOW | c.-9C>T | CHRNA1 | ENSG00000138435.16 | transcript | ENST00000348749.9 | protein_coding | 1/9 | chr2 | 174764403 | ||||||
|
chr2:174764411
|
T | G | 2 | a0001c0001t0004a0009c0011t0004 | 2 | HG02257.hp2 HG03098.hp2 |
5_prime_UTR_variant | MODIFIER | c.-17A>C | CHRNA1 | ENSG00000138435.16 | transcript | ENST00000348749.9 | protein_coding | 1/9 | 17 | chr2 | 174764411 | |||||
|
chr2:174764412
|
G | A | 1 | a0001c0001t0009 | 1 | HG03453.hp2 | 5_prime_UTR_variant | MODIFIER | c.-18C>T | CHRNA1 | ENSG00000138435.16 | transcript | ENST00000348749.9 | protein_coding | 1/9 | 18 | chr2 | 174764412 |
| chr:pos | ref | alt | # # of ghapid:genebody level |
ghapids | # # of haplotypeids |
haplotypeids | annotation | impact | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | genebody_biotype | rank | cdna cdna pos length |
cds cds pos length |
aa aa pos length |
distance | status | chr | pos |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
chr2:174748331
|
A | C | 46 | a0001c0001t0001g0001a0001c0001t0001g0004a0001c0001t0001g0010others(43): Show | 129 | HG00099.hp2 HG00140.hp1 HG00280.hp2 others(126): Show |
intron_variant | MODIFIER | c.1243-76T>G | CHRNA1 | ENSG00000138435.16 | transcript | ENST00000348749.9 | protein_coding | 8/8 | chr2 | 174748331 | ||||||
|
chr2:174748387
|
G | A | 115 | a0001c0001t0001g0001a0001c0001t0001g0002a0001c0001t0001g0004others(112): Show | 277 | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(274): Show |
intron_variant | MODIFIER | c.1243-132C>T | CHRNA1 | ENSG00000138435.16 | transcript | ENST00000348749.9 | protein_coding | 8/8 | chr2 | 174748387 | ||||||
|
chr2:174748437
|
G | C | 36 | a0001c0001t0001g0025a0001c0001t0001g0058a0001c0001t0001g0133others(33): Show | 54 | HG00609.hp2 HG00639.hp2 HG01069.hp2 others(51): Show |
intron_variant | MODIFIER | c.1242+143C>G | CHRNA1 | ENSG00000138435.16 | transcript | ENST00000348749.9 | protein_coding | 8/8 | chr2 | 174748437 | ||||||
|
chr2:174748441
|
A | C | 63 | a0001c0001t0001g0002a0001c0001t0001g0005a0001c0001t0001g0006others(60): Show | 146 | HG00099.hp1 HG00140.hp2 HG00280.hp1 others(143): Show |
intron_variant | MODIFIER | c.1242+139T>G | CHRNA1 | ENSG00000138435.16 | transcript | ENST00000348749.9 | protein_coding | 8/8 | chr2 | 174748441 | ||||||
|
chr2:174748545
|
A | T | 10 | a0001c0001t0001g0009a0001c0001t0001g0011a0001c0001t0001g0012others(7): Show | 23 | HG00408.hp2 HG02071.hp1 HG02109.hp1 others(20): Show |
intron_variant | MODIFIER | c.1242+35T>A | CHRNA1 | ENSG00000138435.16 | transcript | ENST00000348749.9 | protein_coding | 8/8 | chr2 | 174748545 | ||||||
|
chr2:174748845
|
T | C | 2 | a0001c0001t0007g0082a0009c0011t0004g0169 | 2 | HG02486.hp1 HG03098.hp2 |
intron_variant | MODIFIER | c.1003-26A>G | CHRNA1 | ENSG00000138435.16 | transcript | ENST00000348749.9 | protein_coding | 7/8 | chr2 | 174748845 | ||||||
|
chr2:174748849
|
AATT | A | 5 | a0001c0002t0001g0024a0002c0003t0001g0008a0002c0003t0001g0061others(2): Show | 10 | HG02055.hp1 HG02055.hp2 HG02280.hp1 others(7): Show |
intron_variant | MODIFIER | c.1003-33_1003-31del others(3): Show |
CHRNA1 | ENSG00000138435.16 | transcript | ENST00000348749.9 | protein_coding | 7/8 | chr2 | 174748849 | ||||||
|
chr2:174748872
|
T | C | 144 | a0001c0001t0001g0001a0001c0001t0001g0002a0001c0001t0001g0004others(141): Show | 329 | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(326): Show |
intron_variant | MODIFIER | c.1003-53A>G | CHRNA1 | ENSG00000138435.16 | transcript | ENST00000348749.9 | protein_coding | 7/8 | chr2 | 174748872 | ||||||
|
chr2:174749088
|
G | A | 2 | a0003c0004t0001g0028a0003c0004t0001g0096 | 3 | HG02559.hp2 HG02717.hp2 HG03471.hp2 |
intron_variant | MODIFIER | c.1003-269C>T | CHRNA1 | ENSG00000138435.16 | transcript | ENST00000348749.9 | protein_coding | 7/8 | chr2 | 174749088 | ||||||
|
chr2:174749120
|
C | A | 1 | a0001c0001t0001g0111 | 1 | NA18942.hp2 | intron_variant | MODIFIER | c.1003-301G>T | CHRNA1 | ENSG00000138435.16 | transcript | ENST00000348749.9 | protein_coding | 7/8 | chr2 | 174749120 | ||||||
|
chr2:174749125
|
A | G | 1 | a0001c0001t0001g0019 | 3 | HG02738.hp2 HG03491.hp2 HG03927.hp1 |
intron_variant | MODIFIER | c.1003-306T>C | CHRNA1 | ENSG00000138435.16 | transcript | ENST00000348749.9 | protein_coding | 7/8 | chr2 | 174749125 | ||||||
|
chr2:174749213
|
A | G | 6 | a0001c0001t0001g0021a0001c0001t0001g0039a0001c0001t0001g0040others(3): Show | 10 | HG01891.hp1 HG02486.hp2 HG02572.hp1 others(7): Show |
intron_variant | MODIFIER | c.1003-394T>C | CHRNA1 | ENSG00000138435.16 | transcript | ENST00000348749.9 | protein_coding | 7/8 | chr2 | 174749213 | ||||||
|
chr2:174749233
|
T | C | 3 | a0001c0001t0004g0170a0001c0001t0007g0082a0009c0011t0004g0169 | 3 | HG02257.hp2 HG02486.hp1 HG03098.hp2 |
intron_variant | MODIFIER | c.1003-414A>G | CHRNA1 | ENSG00000138435.16 | transcript | ENST00000348749.9 | protein_coding | 7/8 | chr2 | 174749233 | ||||||
|
chr2:174749304
|
ACTCTTAC others(4): Show |
A | 5 | a0001c0001t0001g0023a0001c0001t0001g0025a0001c0001t0001g0060others(2): Show | 7 | HG01884.hp2 HG02280.hp2 HG03098.hp1 others(4): Show |
intron_variant | MODIFIER | c.1003-496_1003-486d others(13): Show |
CHRNA1 | ENSG00000138435.16 | transcript | ENST00000348749.9 | protein_coding | 7/8 | chr2 | 174749304 | ||||||
|
chr2:174749420
|
T | C | 5 | a0001c0001t0001g0023a0001c0001t0001g0025a0001c0001t0001g0060others(2): Show | 7 | HG01884.hp2 HG02280.hp2 HG03098.hp1 others(4): Show |
intron_variant | MODIFIER | c.1002+526A>G | CHRNA1 | ENSG00000138435.16 | transcript | ENST00000348749.9 | protein_coding | 7/8 | chr2 | 174749420 | ||||||
|
chr2:174749468
|
CGT | C | 5 | a0001c0001t0001g0023a0001c0001t0001g0025a0001c0001t0001g0060others(2): Show | 7 | HG01884.hp2 HG02280.hp2 HG03098.hp1 others(4): Show |
intron_variant | MODIFIER | c.1002+476_1002+477d others(4): Show |
CHRNA1 | ENSG00000138435.16 | transcript | ENST00000348749.9 | protein_coding | 7/8 | chr2 | 174749468 | ||||||
|
chr2:174749673
|
G | A | 5 | a0001c0001t0001g0023a0001c0001t0001g0025a0001c0001t0001g0060others(2): Show | 7 | HG01884.hp2 HG02280.hp2 HG03098.hp1 others(4): Show |
intron_variant | MODIFIER | c.1002+273C>T | CHRNA1 | ENSG00000138435.16 | transcript | ENST00000348749.9 | protein_coding | 7/8 | chr2 | 174749673 | ||||||
|
chr2:174749826
|
G | A | 3 | a0001c0001t0001g0134a0003c0004t0001g0028a0003c0004t0001g0096 | 4 | HG02559.hp2 HG02717.hp2 HG03471.hp2 others(1): Show |
intron_variant | MODIFIER | c.1002+120C>T | CHRNA1 | ENSG00000138435.16 | transcript | ENST00000348749.9 | protein_coding | 7/8 | chr2 | 174749826 | ||||||
|
chr2:174749888
|
G | A | 3 | a0001c0001t0001g0021a0001c0001t0001g0138a0001c0001t0001g0139 | 5 | HG01891.hp1 HG02486.hp2 HG02572.hp1 others(2): Show |
intron_variant | MODIFIER | c.1002+58C>T | CHRNA1 | ENSG00000138435.16 | transcript | ENST00000348749.9 | protein_coding | 7/8 | chr2 | 174749888 | ||||||
|
chr2:174750180
|
CA | C | 38 | a0001c0001t0001g0006a0001c0001t0001g0011a0001c0001t0001g0012others(35): Show | 69 | HG00609.hp2 HG00621.hp2 HG00639.hp2 others(66): Show |
intron_variant | MODIFIER | c.779-12delT | CHRNA1 | ENSG00000138435.16 | transcript | ENST00000348749.9 | protein_coding | 6/8 | chr2 | 174750180 | ||||||
|
chr2:174750180
|
CAA | C | 97 | a0001c0001t0001g0001a0001c0001t0001g0002a0001c0001t0001g0004others(94): Show | 256 | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(253): Show |
intron_variant | MODIFIER | c.779-13_779-12delTT | CHRNA1 | ENSG00000138435.16 | transcript | ENST00000348749.9 | protein_coding | 6/8 | chr2 | 174750180 | ||||||
|
chr2:174750180
|
CAAA | C | 7 | a0001c0001t0004g0170a0001c0001t0007g0082a0003c0004t0001g0028others(4): Show | 9 | HG02257.hp2 HG02258.hp1 HG02486.hp1 others(6): Show |
intron_variant | MODIFIER | c.779-14_779-12delTT others(1): Show |
CHRNA1 | ENSG00000138435.16 | transcript | ENST00000348749.9 | protein_coding | 6/8 | chr2 | 174750180 | ||||||
|
chr2:174750208
|
AC | A | 2 | a0001c0001t0001g0042a0001c0006t0001g0043 | 4 | HG00735.hp2 HG02630.hp2 HG02717.hp1 others(1): Show |
intron_variant | MODIFIER | c.779-40delG | CHRNA1 | ENSG00000138435.16 | transcript | ENST00000348749.9 | protein_coding | 6/8 | chr2 | 174750208 | ||||||
|
chr2:174750293
|
G | A | 1 | a0004c0005t0003g0037 | 2 | HG02258.hp1 HG03579.hp1 |
intron_variant | MODIFIER | c.779-124C>T | CHRNA1 | ENSG00000138435.16 | transcript | ENST00000348749.9 | protein_coding | 6/8 | chr2 | 174750293 | ||||||
|
chr2:174750304
|
C | T | 6 | a0001c0001t0001g0099a0001c0002t0001g0024a0002c0003t0001g0008others(3): Show | 11 | HG02055.hp1 HG02055.hp2 HG02280.hp1 others(8): Show |
intron_variant | MODIFIER | c.779-135G>A | CHRNA1 | ENSG00000138435.16 | transcript | ENST00000348749.9 | protein_coding | 6/8 | chr2 | 174750304 | ||||||
|
chr2:174750612
|
A | G | 25 | a0001c0002t0001g0003a0001c0002t0001g0016a0001c0002t0001g0026others(22): Show | 41 | HG00609.hp2 HG00639.hp2 HG01069.hp2 others(38): Show |
intron_variant | MODIFIER | c.779-443T>C | CHRNA1 | ENSG00000138435.16 | transcript | ENST00000348749.9 | protein_coding | 6/8 | chr2 | 174750612 | ||||||
|
chr2:174750631
|
T | C | 151 | a0001c0001t0001g0001a0001c0001t0001g0002a0001c0001t0001g0004others(148): Show | 341 | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(338): Show |
intron_variant | MODIFIER | c.779-462A>G | CHRNA1 | ENSG00000138435.16 | transcript | ENST00000348749.9 | protein_coding | 6/8 | chr2 | 174750631 | ||||||
|
chr2:174750672
|
T | C | 1 | a0001c0001t0001g0069 | 1 | HG02976.hp1 | intron_variant | MODIFIER | c.779-503A>G | CHRNA1 | ENSG00000138435.16 | transcript | ENST00000348749.9 | protein_coding | 6/8 | chr2 | 174750672 | ||||||
|
chr2:174750739
|
C | A | 1 | a0001c0001t0001g0114 | 1 | HG02738.hp1 | intron_variant | MODIFIER | c.779-570G>T | CHRNA1 | ENSG00000138435.16 | transcript | ENST00000348749.9 | protein_coding | 6/8 | chr2 | 174750739 | ||||||
|
chr2:174750793
|
C | T | 5 | a0001c0001t0001g0023a0001c0001t0001g0025a0001c0001t0001g0060others(2): Show | 7 | HG01884.hp2 HG02280.hp2 HG03098.hp1 others(4): Show |
intron_variant | MODIFIER | c.779-624G>A | CHRNA1 | ENSG00000138435.16 | transcript | ENST00000348749.9 | protein_coding | 6/8 | chr2 | 174750793 | ||||||
|
chr2:174750858
|
C | T | 1 | a0001c0001t0001g0167 | 1 | HG01081.hp2 | intron_variant | MODIFIER | c.779-689G>A | CHRNA1 | ENSG00000138435.16 | transcript | ENST00000348749.9 | protein_coding | 6/8 | chr2 | 174750858 | ||||||
|
chr2:174750862
|
G | A | 43 | a0001c0001t0001g0002a0001c0001t0001g0005a0001c0001t0001g0006others(40): Show | 109 | HG00099.hp1 HG00140.hp2 HG00280.hp1 others(106): Show |
intron_variant | MODIFIER | c.779-693C>T | CHRNA1 | ENSG00000138435.16 | transcript | ENST00000348749.9 | protein_coding | 6/8 | chr2 | 174750862 | ||||||
|
chr2:174750911
|
C | A | 43 | a0001c0001t0001g0002a0001c0001t0001g0005a0001c0001t0001g0006others(40): Show | 109 | HG00099.hp1 HG00140.hp2 HG00280.hp1 others(106): Show |
intron_variant | MODIFIER | c.779-742G>T | CHRNA1 | ENSG00000138435.16 | transcript | ENST00000348749.9 | protein_coding | 6/8 | chr2 | 174750911 | ||||||
|
chr2:174750925
|
T | C | 157 | a0001c0001t0001g0001a0001c0001t0001g0002a0001c0001t0001g0004others(154): Show | 351 | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(348): Show |
intron_variant | MODIFIER | c.779-756A>G | CHRNA1 | ENSG00000138435.16 | transcript | ENST00000348749.9 | protein_coding | 6/8 | chr2 | 174750925 | ||||||
|
chr2:174750945
|
T | C | 2 | a0001c0001t0001g0035a0001c0001t0001g0036 | 4 | HG02451.hp2 HG02809.hp2 HG02922.hp2 others(1): Show |
intron_variant | MODIFIER | c.779-776A>G | CHRNA1 | ENSG00000138435.16 | transcript | ENST00000348749.9 | protein_coding | 6/8 | chr2 | 174750945 | ||||||
|
chr2:174751264
|
G | A | 2 | a0001c0001t0001g0042a0001c0006t0001g0043 | 4 | HG00735.hp2 HG02630.hp2 HG02717.hp1 others(1): Show |
intron_variant | MODIFIER | c.779-1095C>T | CHRNA1 | ENSG00000138435.16 | transcript | ENST00000348749.9 | protein_coding | 6/8 | chr2 | 174751264 | ||||||
|
chr2:174751338
|
TG | T | 42 | a0001c0001t0001g0002a0001c0001t0001g0005a0001c0001t0001g0006others(39): Show | 107 | HG00099.hp1 HG00140.hp2 HG00280.hp1 others(104): Show |
intron_variant | MODIFIER | c.779-1170delC | CHRNA1 | ENSG00000138435.16 | transcript | ENST00000348749.9 | protein_coding | 6/8 | chr2 | 174751338 | ||||||
|
chr2:174751347
|
C | T | 8 | a0001c0001t0001g0023a0001c0001t0001g0025a0001c0001t0001g0060others(5): Show | 11 | HG01884.hp2 HG02280.hp2 HG02559.hp2 others(8): Show |
intron_variant | MODIFIER | c.779-1178G>A | CHRNA1 | ENSG00000138435.16 | transcript | ENST00000348749.9 | protein_coding | 6/8 | chr2 | 174751347 | ||||||
|
chr2:174751462
|
G | A | 1 | a0001c0001t0001g0031 | 2 | HG03942.hp1 HG04228.hp1 |
intron_variant | MODIFIER | c.779-1293C>T | CHRNA1 | ENSG00000138435.16 | transcript | ENST00000348749.9 | protein_coding | 6/8 | chr2 | 174751462 | ||||||
|
chr2:174751573
|
A | G | 25 | a0001c0002t0001g0003a0001c0002t0001g0016a0001c0002t0001g0026others(22): Show | 41 | HG00609.hp2 HG00639.hp2 HG01069.hp2 others(38): Show |
intron_variant | MODIFIER | c.779-1404T>C | CHRNA1 | ENSG00000138435.16 | transcript | ENST00000348749.9 | protein_coding | 6/8 | chr2 | 174751573 | ||||||
|
chr2:174751685
|
C | CT | 9 | a0001c0001t0001g0011a0001c0001t0001g0048a0001c0001t0001g0052others(6): Show | 13 | HG00738.hp2 HG01109.hp2 HG02257.hp2 others(10): Show |
intron_variant | MODIFIER | c.779-1517dupA | CHRNA1 | ENSG00000138435.16 | transcript | ENST00000348749.9 | protein_coding | 6/8 | chr2 | 174751685 | ||||||
|
chr2:174751765
|
G | A | 20 | a0001c0002t0001g0003a0001c0002t0001g0026a0001c0002t0001g0027others(17): Show | 34 | HG00609.hp2 HG00639.hp2 HG01069.hp2 others(31): Show |
intron_variant | MODIFIER | c.779-1596C>T | CHRNA1 | ENSG00000138435.16 | transcript | ENST00000348749.9 | protein_coding | 6/8 | chr2 | 174751765 | ||||||
|
chr2:174751835
|
C | T | 1 | a0002c0003t0001g0098 | 1 | HG03041.hp1 | intron_variant | MODIFIER | c.779-1666G>A | CHRNA1 | ENSG00000138435.16 | transcript | ENST00000348749.9 | protein_coding | 6/8 | chr2 | 174751835 | ||||||
|
chr2:174751903
|
C | G | 1 | a0001c0001t0001g0159 | 1 | HG01106.hp1 | intron_variant | MODIFIER | c.778+1600G>C | CHRNA1 | ENSG00000138435.16 | transcript | ENST00000348749.9 | protein_coding | 6/8 | chr2 | 174751903 | ||||||
|
chr2:174751917
|
T | C | 1 | a0001c0001t0005g0047 | 1 | HG02818.hp1 | intron_variant | MODIFIER | c.778+1586A>G | CHRNA1 | ENSG00000138435.16 | transcript | ENST00000348749.9 | protein_coding | 6/8 | chr2 | 174751917 | ||||||
|
chr2:174751939
|
G | A | 107 | a0001c0001t0001g0001a0001c0001t0001g0002a0001c0001t0001g0004others(104): Show | 272 | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(269): Show |
intron_variant | MODIFIER | c.778+1564C>T | CHRNA1 | ENSG00000138435.16 | transcript | ENST00000348749.9 | protein_coding | 6/8 | chr2 | 174751939 | ||||||
|
chr2:174752012
|
G | A | 1 | a0001c0001t0001g0147 | 1 | NA18957.hp1 | intron_variant | MODIFIER | c.778+1491C>T | CHRNA1 | ENSG00000138435.16 | transcript | ENST00000348749.9 | protein_coding | 6/8 | chr2 | 174752012 | ||||||
|
chr2:174752041
|
A | G | 20 | a0001c0002t0001g0003a0001c0002t0001g0026a0001c0002t0001g0027others(17): Show | 34 | HG00609.hp2 HG00639.hp2 HG01069.hp2 others(31): Show |
intron_variant | MODIFIER | c.778+1462T>C | CHRNA1 | ENSG00000138435.16 | transcript | ENST00000348749.9 | protein_coding | 6/8 | chr2 | 174752041 | ||||||
|
chr2:174752048
|
G | A | 8 | a0001c0001t0001g0023a0001c0001t0001g0025a0001c0001t0001g0060others(5): Show | 11 | HG01884.hp2 HG02280.hp2 HG02559.hp2 others(8): Show |
intron_variant | MODIFIER | c.778+1455C>T | CHRNA1 | ENSG00000138435.16 | transcript | ENST00000348749.9 | protein_coding | 6/8 | chr2 | 174752048 | ||||||
|
chr2:174752088
|
G | A | 1 | a0001c0001t0001g0152 | 1 | NA20752.hp2 | intron_variant | MODIFIER | c.778+1415C>T | CHRNA1 | ENSG00000138435.16 | transcript | ENST00000348749.9 | protein_coding | 6/8 | chr2 | 174752088 | ||||||
|
chr2:174752121
|
C | T | 6 | a0001c0001t0001g0004a0001c0001t0001g0033a0001c0001t0001g0042others(3): Show | 17 | HG00621.hp2 HG00673.hp1 HG00735.hp2 others(14): Show |
intron_variant | MODIFIER | c.778+1382G>A | CHRNA1 | ENSG00000138435.16 | transcript | ENST00000348749.9 | protein_coding | 6/8 | chr2 | 174752121 | ||||||
|
chr2:174752122
|
G | A | 8 | a0001c0001t0001g0099a0001c0001t0002g0050a0001c0001t0002g0059others(5): Show | 13 | HG01891.hp2 HG02055.hp1 HG02055.hp2 others(10): Show |
intron_variant | MODIFIER | c.778+1381C>T | CHRNA1 | ENSG00000138435.16 | transcript | ENST00000348749.9 | protein_coding | 6/8 | chr2 | 174752122 | ||||||
|
chr2:174752140
|
G | A | 1 | a0001c0001t0001g0153 | 1 | HG01123.hp1 | intron_variant | MODIFIER | c.778+1363C>T | CHRNA1 | ENSG00000138435.16 | transcript | ENST00000348749.9 | protein_coding | 6/8 | chr2 | 174752140 | ||||||
|
chr2:174752285
|
T | C | 157 | a0001c0001t0001g0001a0001c0001t0001g0002a0001c0001t0001g0004others(154): Show | 351 | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(348): Show |
intron_variant | MODIFIER | c.778+1218A>G | CHRNA1 | ENSG00000138435.16 | transcript | ENST00000348749.9 | protein_coding | 6/8 | chr2 | 174752285 | ||||||
|
chr2:174752286
|
G | T | 20 | a0001c0002t0001g0003a0001c0002t0001g0026a0001c0002t0001g0027others(17): Show | 34 | HG00609.hp2 HG00639.hp2 HG01069.hp2 others(31): Show |
intron_variant | MODIFIER | c.778+1217C>A | CHRNA1 | ENSG00000138435.16 | transcript | ENST00000348749.9 | protein_coding | 6/8 | chr2 | 174752286 | ||||||
|
chr2:174752350
|
C | CA | 33 | a0001c0001t0001g0023a0001c0001t0001g0025a0001c0001t0001g0060others(30): Show | 52 | HG00609.hp2 HG00639.hp2 HG01069.hp2 others(49): Show |
intron_variant | MODIFIER | c.778+1152_778+1153i others(3): Show |
CHRNA1 | ENSG00000138435.16 | transcript | ENST00000348749.9 | protein_coding | 6/8 | chr2 | 174752350 | ||||||
|
chr2:174752450
|
GTCCCAGC others(21): Show |
G | 1 | a0001c0001t0001g0106 | 1 | NA19082.hp1 | intron_variant | MODIFIER | c.778+1025_778+1052d others(30): Show |
CHRNA1 | ENSG00000138435.16 | transcript | ENST00000348749.9 | protein_coding | 6/8 | chr2 | 174752450 | ||||||
|
chr2:174752712
|
A | C | 42 | a0001c0001t0001g0021a0001c0001t0001g0039a0001c0001t0001g0040others(39): Show | 68 | HG00609.hp2 HG00639.hp2 HG01069.hp2 others(65): Show |
intron_variant | MODIFIER | c.778+791T>G | CHRNA1 | ENSG00000138435.16 | transcript | ENST00000348749.9 | protein_coding | 6/8 | chr2 | 174752712 | ||||||
|
chr2:174752746
|
A | C | 17 | a0001c0001t0001g0021a0001c0001t0001g0039a0001c0001t0001g0040others(14): Show | 27 | HG01891.hp1 HG01891.hp2 HG02055.hp1 others(24): Show |
intron_variant | MODIFIER | c.778+757T>G | CHRNA1 | ENSG00000138435.16 | transcript | ENST00000348749.9 | protein_coding | 6/8 | chr2 | 174752746 | ||||||
|
chr2:174752753
|
G | GT | 44 | a0001c0001t0001g0001a0001c0001t0001g0004a0001c0001t0001g0009others(41): Show | 132 | HG00099.hp2 HG00140.hp1 HG00280.hp2 others(129): Show |
intron_variant | MODIFIER | c.778+749_778+750ins others(1): Show |
CHRNA1 | ENSG00000138435.16 | transcript | ENST00000348749.9 | protein_coding | 6/8 | chr2 | 174752753 | ||||||
|
chr2:174752754
|
G | GT | 60 | a0001c0001t0001g0002a0001c0001t0001g0005a0001c0001t0001g0006others(57): Show | 136 | HG00099.hp1 HG00140.hp2 HG00280.hp1 others(133): Show |
intron_variant | MODIFIER | c.778+748dupA | CHRNA1 | ENSG00000138435.16 | transcript | ENST00000348749.9 | protein_coding | 6/8 | chr2 | 174752754 | ||||||
|
chr2:174752754
|
G | T | 49 | a0001c0001t0001g0001a0001c0001t0001g0004a0001c0001t0001g0009others(46): Show | 138 | HG00099.hp2 HG00140.hp1 HG00280.hp2 others(135): Show |
intron_variant | MODIFIER | c.778+749C>A | CHRNA1 | ENSG00000138435.16 | transcript | ENST00000348749.9 | protein_coding | 6/8 | chr2 | 174752754 | ||||||
|
chr2:174752754
|
GT | G | 24 | a0001c0002t0001g0003a0001c0002t0001g0016a0001c0002t0001g0026others(21): Show | 40 | HG00609.hp2 HG00639.hp2 HG01069.hp2 others(37): Show |
intron_variant | MODIFIER | c.778+748delA | CHRNA1 | ENSG00000138435.16 | transcript | ENST00000348749.9 | protein_coding | 6/8 | chr2 | 174752754 | ||||||
|
chr2:174752761
|
T | TG | 3 | a0001c0001t0001g0013a0001c0001t0001g0087a0001c0001t0001g0118 | 6 | HG02895.hp1 HG02897.hp1 HG02976.hp2 others(3): Show |
intron_variant | MODIFIER | c.778+741_778+742ins others(1): Show |
CHRNA1 | ENSG00000138435.16 | transcript | ENST00000348749.9 | protein_coding | 6/8 | chr2 | 174752761 | ||||||
|
chr2:174752768
|
A | T | 1 | a0001c0001t0001g0035 | 2 | HG02922.hp2 HG03139.hp2 |
intron_variant | MODIFIER | c.778+735T>A | CHRNA1 | ENSG00000138435.16 | transcript | ENST00000348749.9 | protein_coding | 6/8 | chr2 | 174752768 | ||||||
|
chr2:174752829
|
C | G | 17 | a0001c0001t0001g0021a0001c0001t0001g0039a0001c0001t0001g0040others(14): Show | 27 | HG01891.hp1 HG01891.hp2 HG02055.hp1 others(24): Show |
intron_variant | MODIFIER | c.778+674G>C | CHRNA1 | ENSG00000138435.16 | transcript | ENST00000348749.9 | protein_coding | 6/8 | chr2 | 174752829 | ||||||
|
chr2:174752950
|
G | T | 140 | a0001c0001t0001g0001a0001c0001t0001g0002a0001c0001t0001g0004others(137): Show | 324 | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(321): Show |
intron_variant | MODIFIER | c.778+553C>A | CHRNA1 | ENSG00000138435.16 | transcript | ENST00000348749.9 | protein_coding | 6/8 | chr2 | 174752950 | ||||||
|
chr2:174752980
|
C | G | 6 | a0001c0001t0001g0099a0001c0002t0001g0024a0002c0003t0001g0008others(3): Show | 11 | HG02055.hp1 HG02055.hp2 HG02280.hp1 others(8): Show |
intron_variant | MODIFIER | c.778+523G>C | CHRNA1 | ENSG00000138435.16 | transcript | ENST00000348749.9 | protein_coding | 6/8 | chr2 | 174752980 | ||||||
|
chr2:174753044
|
C | T | 1 | a0001c0002t0001g0064 | 1 | HG02559.hp1 | intron_variant | MODIFIER | c.778+459G>A | CHRNA1 | ENSG00000138435.16 | transcript | ENST00000348749.9 | protein_coding | 6/8 | chr2 | 174753044 | ||||||
|
chr2:174753095
|
T | A | 1 | a0001c0001t0001g0106 | 1 | NA19082.hp1 | intron_variant | MODIFIER | c.778+408A>T | CHRNA1 | ENSG00000138435.16 | transcript | ENST00000348749.9 | protein_coding | 6/8 | chr2 | 174753095 | ||||||
|
chr2:174753121
|
G | C | 25 | a0001c0002t0001g0003a0001c0002t0001g0016a0001c0002t0001g0026others(22): Show | 41 | HG00609.hp2 HG00639.hp2 HG01069.hp2 others(38): Show |
intron_variant | MODIFIER | c.778+382C>G | CHRNA1 | ENSG00000138435.16 | transcript | ENST00000348749.9 | protein_coding | 6/8 | chr2 | 174753121 | ||||||
|
chr2:174753187
|
G | C | 4 | a0001c0001t0001g0133a0001c0001t0002g0050a0001c0001t0002g0059others(1): Show | 4 | HG01891.hp2 HG02818.hp1 HG02895.hp2 others(1): Show |
intron_variant | MODIFIER | c.778+316C>G | CHRNA1 | ENSG00000138435.16 | transcript | ENST00000348749.9 | protein_coding | 6/8 | chr2 | 174753187 | ||||||
|
chr2:174753302
|
C | T | 1 | a0001c0002t0001g0064 | 1 | HG02559.hp1 | intron_variant | MODIFIER | c.778+201G>A | CHRNA1 | ENSG00000138435.16 | transcript | ENST00000348749.9 | protein_coding | 6/8 | chr2 | 174753302 | ||||||
|
chr2:174753358
|
G | A | 3 | a0001c0001t0001g0134a0003c0004t0001g0028a0003c0004t0001g0096 | 4 | HG02559.hp2 HG02717.hp2 HG03471.hp2 others(1): Show |
intron_variant | MODIFIER | c.778+145C>T | CHRNA1 | ENSG00000138435.16 | transcript | ENST00000348749.9 | protein_coding | 6/8 | chr2 | 174753358 | ||||||
|
chr2:174753406
|
T | C | 2 | a0001c0001t0001g0018a0001c0001t0001g0136 | 4 | HG02040.hp1 HG02132.hp2 NA18612.hp2 others(1): Show |
intron_variant | MODIFIER | c.778+97A>G | CHRNA1 | ENSG00000138435.16 | transcript | ENST00000348749.9 | protein_coding | 6/8 | chr2 | 174753406 | ||||||
|
chr2:174753889
|
T | C | 1 | a0001c0001t0001g0156 | 1 | HG00423.hp2 | intron_variant | MODIFIER | c.541-149A>G | CHRNA1 | ENSG00000138435.16 | transcript | ENST00000348749.9 | protein_coding | 5/8 | chr2 | 174753889 | ||||||
|
chr2:174754215
|
C | G | 5 | a0001c0001t0001g0023a0001c0001t0001g0025a0001c0001t0001g0060others(2): Show | 7 | HG01884.hp2 HG02280.hp2 HG03098.hp1 others(4): Show |
splice_region_variant&intron_variant | LOW | c.540+4G>C | CHRNA1 | ENSG00000138435.16 | transcript | ENST00000348749.9 | protein_coding | 5/8 | chr2 | 174754215 | ||||||
|
chr2:174754512
|
G | A | 1 | a0001c0002t0001g0089 | 1 | HG02970.hp1 | intron_variant | MODIFIER | c.345-98C>T | CHRNA1 | ENSG00000138435.16 | transcript | ENST00000348749.9 | protein_coding | 4/8 | chr2 | 174754512 | ||||||
|
chr2:174754837
|
C | T | 1 | a0001c0001t0001g0029 | 2 | HG03669.hp1 HG03688.hp2 |
intron_variant | MODIFIER | c.345-423G>A | CHRNA1 | ENSG00000138435.16 | transcript | ENST00000348749.9 | protein_coding | 4/8 | chr2 | 174754837 | ||||||
|
chr2:174754863
|
A | T | 1 | a0001c0001t0001g0048 | 1 | NA18978.hp1 | intron_variant | MODIFIER | c.345-449T>A | CHRNA1 | ENSG00000138435.16 | transcript | ENST00000348749.9 | protein_coding | 4/8 | chr2 | 174754863 | ||||||
|
chr2:174754864
|
G | A | 1 | a0001c0001t0001g0048 | 1 | NA18978.hp1 | intron_variant | MODIFIER | c.345-450C>T | CHRNA1 | ENSG00000138435.16 | transcript | ENST00000348749.9 | protein_coding | 4/8 | chr2 | 174754864 | ||||||
|
chr2:174754879
|
A | ACT | 8 | a0001c0001t0001g0021a0001c0001t0001g0039a0001c0001t0001g0040others(5): Show | 12 | HG01891.hp1 HG01891.hp2 HG02486.hp2 others(9): Show |
intron_variant | MODIFIER | c.345-467_345-466dup others(2): Show |
CHRNA1 | ENSG00000138435.16 | transcript | ENST00000348749.9 | protein_coding | 4/8 | chr2 | 174754879 | ||||||
|
chr2:174754882
|
C | CT | 38 | a0001c0001t0001g0011a0001c0001t0001g0012a0001c0001t0001g0015others(35): Show | 67 | HG00609.hp2 HG00639.hp2 HG01069.hp2 others(64): Show |
intron_variant | MODIFIER | c.345-469dupA | CHRNA1 | ENSG00000138435.16 | transcript | ENST00000348749.9 | protein_coding | 4/8 | chr2 | 174754882 | ||||||
|
chr2:174754882
|
C | CTT | 6 | a0001c0001t0001g0133a0001c0001t0001g0134a0001c0001t0005g0047others(3): Show | 7 | HG02559.hp2 HG02717.hp2 HG02818.hp1 others(4): Show |
intron_variant | MODIFIER | c.345-470_345-469dup others(2): Show |
CHRNA1 | ENSG00000138435.16 | transcript | ENST00000348749.9 | protein_coding | 4/8 | chr2 | 174754882 | ||||||
|
chr2:174754882
|
CT | C | 7 | a0001c0001t0001g0007a0001c0001t0001g0116a0001c0001t0001g0121others(4): Show | 12 | HG01069.hp1 HG01070.hp1 HG01070.hp2 others(9): Show |
intron_variant | MODIFIER | c.345-469delA | CHRNA1 | ENSG00000138435.16 | transcript | ENST00000348749.9 | protein_coding | 4/8 | chr2 | 174754882 | ||||||
|
chr2:174754900
|
T | C | 7 | a0001c0001t0001g0013a0001c0001t0001g0081a0001c0001t0001g0085others(4): Show | 10 | HG01496.hp1 HG02698.hp2 HG02895.hp1 others(7): Show |
intron_variant | MODIFIER | c.345-486A>G | CHRNA1 | ENSG00000138435.16 | transcript | ENST00000348749.9 | protein_coding | 4/8 | chr2 | 174754900 | ||||||
|
chr2:174754979
|
G | A | 1 | a0001c0001t0001g0157 | 1 | NA19057.hp1 | intron_variant | MODIFIER | c.345-565C>T | CHRNA1 | ENSG00000138435.16 | transcript | ENST00000348749.9 | protein_coding | 4/8 | chr2 | 174754979 | ||||||
|
chr2:174755171
|
C | T | 4 | a0001c0001t0001g0020a0001c0001t0001g0120a0001c0001t0001g0121others(1): Show | 6 | HG00609.hp1 HG02015.hp2 HG02071.hp2 others(3): Show |
intron_variant | MODIFIER | c.345-757G>A | CHRNA1 | ENSG00000138435.16 | transcript | ENST00000348749.9 | protein_coding | 4/8 | chr2 | 174755171 | ||||||
|
chr2:174755175
|
G | A | 8 | a0001c0001t0001g0099a0001c0001t0002g0050a0001c0001t0002g0059others(5): Show | 13 | HG01891.hp2 HG02055.hp1 HG02055.hp2 others(10): Show |
intron_variant | MODIFIER | c.345-761C>T | CHRNA1 | ENSG00000138435.16 | transcript | ENST00000348749.9 | protein_coding | 4/8 | chr2 | 174755175 | ||||||
|
chr2:174755220
|
T | C | 7 | a0001c0001t0001g0005a0001c0001t0001g0117a0001c0001t0001g0134others(4): Show | 16 | HG00099.hp1 HG00140.hp2 HG00735.hp1 others(13): Show |
intron_variant | MODIFIER | c.345-806A>G | CHRNA1 | ENSG00000138435.16 | transcript | ENST00000348749.9 | protein_coding | 4/8 | chr2 | 174755220 | ||||||
|
chr2:174755232
|
C | T | 3 | a0001c0002t0001g0062a0001c0002t0001g0063a0001c0002t0001g0064 | 3 | HG02559.hp1 HG02922.hp1 HG02965.hp1 |
intron_variant | MODIFIER | c.345-818G>A | CHRNA1 | ENSG00000138435.16 | transcript | ENST00000348749.9 | protein_coding | 4/8 | chr2 | 174755232 | ||||||
|
chr2:174755246
|
T | C | 108 | a0001c0001t0001g0001a0001c0001t0001g0002a0001c0001t0001g0004others(105): Show | 270 | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(267): Show |
intron_variant | MODIFIER | c.345-832A>G | CHRNA1 | ENSG00000138435.16 | transcript | ENST00000348749.9 | protein_coding | 4/8 | chr2 | 174755246 | ||||||
|
chr2:174755376
|
T | C | 1 | a0001c0001t0001g0159 | 1 | HG01106.hp1 | intron_variant | MODIFIER | c.345-962A>G | CHRNA1 | ENSG00000138435.16 | transcript | ENST00000348749.9 | protein_coding | 4/8 | chr2 | 174755376 | ||||||
|
chr2:174755425
|
CT | C | 6 | a0001c0001t0001g0035a0001c0001t0001g0036a0001c0001t0001g0058others(3): Show | 8 | HG02451.hp2 HG02809.hp2 HG02818.hp1 others(5): Show |
intron_variant | MODIFIER | c.345-1012delA | CHRNA1 | ENSG00000138435.16 | transcript | ENST00000348749.9 | protein_coding | 4/8 | chr2 | 174755425 | ||||||
|
chr2:174755541
|
C | A | 39 | a0001c0001t0001g0011a0001c0001t0001g0012a0001c0001t0001g0015others(36): Show | 65 | HG00609.hp2 HG00639.hp2 HG01069.hp2 others(62): Show |
intron_variant | MODIFIER | c.345-1127G>T | CHRNA1 | ENSG00000138435.16 | transcript | ENST00000348749.9 | protein_coding | 4/8 | chr2 | 174755541 | ||||||
|
chr2:174755609
|
G | T | 104 | a0001c0001t0001g0001a0001c0001t0001g0002a0001c0001t0001g0004others(101): Show | 263 | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(260): Show |
intron_variant | MODIFIER | c.345-1195C>A | CHRNA1 | ENSG00000138435.16 | transcript | ENST00000348749.9 | protein_coding | 4/8 | chr2 | 174755609 | ||||||
|
chr2:174755611
|
G | T | 2 | a0001c0001t0002g0050a0001c0001t0002g0059 | 2 | HG01891.hp2 HG02895.hp2 |
intron_variant | MODIFIER | c.345-1197C>A | CHRNA1 | ENSG00000138435.16 | transcript | ENST00000348749.9 | protein_coding | 4/8 | chr2 | 174755611 | ||||||
|
chr2:174755735
|
A | G | 2 | a0001c0001t0001g0058a0005c0014t0001g0135 | 2 | HG03041.hp2 HG03579.hp2 |
intron_variant | MODIFIER | c.345-1321T>C | CHRNA1 | ENSG00000138435.16 | transcript | ENST00000348749.9 | protein_coding | 4/8 | chr2 | 174755735 | ||||||
|
chr2:174755857
|
G | A | 1 | a0001c0002t0001g0077 | 1 | HG02083.hp1 | intron_variant | MODIFIER | c.345-1443C>T | CHRNA1 | ENSG00000138435.16 | transcript | ENST00000348749.9 | protein_coding | 4/8 | chr2 | 174755857 | ||||||
|
chr2:174755927
|
C | G | 1 | a0001c0002t0001g0072 | 1 | NA20905.hp1 | intron_variant | MODIFIER | c.345-1513G>C | CHRNA1 | ENSG00000138435.16 | transcript | ENST00000348749.9 | protein_coding | 4/8 | chr2 | 174755927 | ||||||
|
chr2:174755935
|
G | T | 1 | a0001c0001t0001g0148 | 1 | HG01109.hp2 | intron_variant | MODIFIER | c.345-1521C>A | CHRNA1 | ENSG00000138435.16 | transcript | ENST00000348749.9 | protein_coding | 4/8 | chr2 | 174755935 | ||||||
|
chr2:174756036
|
CA | C | 40 | a0001c0001t0001g0013a0001c0001t0001g0017a0001c0001t0001g0021others(37): Show | 59 | HG01496.hp1 HG01884.hp2 HG01891.hp1 others(56): Show |
intron_variant | MODIFIER | c.344+1529delT | CHRNA1 | ENSG00000138435.16 | transcript | ENST00000348749.9 | protein_coding | 4/8 | chr2 | 174756036 | ||||||
|
chr2:174756036
|
CAA | C | 107 | a0001c0001t0001g0001a0001c0001t0001g0002a0001c0001t0001g0004others(104): Show | 274 | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(271): Show |
intron_variant | MODIFIER | c.344+1528_344+1529d others(4): Show |
CHRNA1 | ENSG00000138435.16 | transcript | ENST00000348749.9 | protein_coding | 4/8 | chr2 | 174756036 | ||||||
|
chr2:174756121
|
G | A | 3 | a0001c0001t0001g0127a0001c0001t0001g0129a0008c0009t0001g0128 | 3 | HG02572.hp2 HG03209.hp1 HG03225.hp2 |
intron_variant | MODIFIER | c.344+1445C>T | CHRNA1 | ENSG00000138435.16 | transcript | ENST00000348749.9 | protein_coding | 4/8 | chr2 | 174756121 | ||||||
|
chr2:174756207
|
C | T | 113 | a0001c0001t0001g0001a0001c0001t0001g0002a0001c0001t0001g0004others(110): Show | 281 | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(278): Show |
intron_variant | MODIFIER | c.344+1359G>A | CHRNA1 | ENSG00000138435.16 | transcript | ENST00000348749.9 | protein_coding | 4/8 | chr2 | 174756207 | ||||||
|
chr2:174756224
|
C | T | 3 | a0001c0001t0001g0134a0003c0004t0001g0028a0003c0004t0001g0096 | 4 | HG02559.hp2 HG02717.hp2 HG03471.hp2 others(1): Show |
intron_variant | MODIFIER | c.344+1342G>A | CHRNA1 | ENSG00000138435.16 | transcript | ENST00000348749.9 | protein_coding | 4/8 | chr2 | 174756224 | ||||||
|
chr2:174756244
|
C | T | 14 | a0001c0001t0001g0021a0001c0001t0001g0039a0001c0001t0001g0040others(11): Show | 23 | HG01891.hp1 HG01891.hp2 HG02055.hp1 others(20): Show |
intron_variant | MODIFIER | c.344+1322G>A | CHRNA1 | ENSG00000138435.16 | transcript | ENST00000348749.9 | protein_coding | 4/8 | chr2 | 174756244 | ||||||
|
chr2:174756347
|
T | C | 2 | a0001c0001t0001g0131a0001c0001t0001g0132 | 2 | HG01074.hp1 NA20805.hp2 |
intron_variant | MODIFIER | c.344+1219A>G | CHRNA1 | ENSG00000138435.16 | transcript | ENST00000348749.9 | protein_coding | 4/8 | chr2 | 174756347 | ||||||
|
chr2:174756581
|
T | C | 2 | a0001c0001t0001g0035a0001c0001t0001g0036 | 4 | HG02451.hp2 HG02809.hp2 HG02922.hp2 others(1): Show |
intron_variant | MODIFIER | c.344+985A>G | CHRNA1 | ENSG00000138435.16 | transcript | ENST00000348749.9 | protein_coding | 4/8 | chr2 | 174756581 | ||||||
|
chr2:174756626
|
C | T | 113 | a0001c0001t0001g0001a0001c0001t0001g0002a0001c0001t0001g0004others(110): Show | 281 | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(278): Show |
intron_variant | MODIFIER | c.344+940G>A | CHRNA1 | ENSG00000138435.16 | transcript | ENST00000348749.9 | protein_coding | 4/8 | chr2 | 174756626 | ||||||
|
chr2:174756660
|
G | T | 30 | a0001c0001t0001g0023a0001c0001t0001g0025a0001c0001t0001g0060others(27): Show | 47 | HG00609.hp2 HG00639.hp2 HG01069.hp2 others(44): Show |
intron_variant | MODIFIER | c.344+906C>A | CHRNA1 | ENSG00000138435.16 | transcript | ENST00000348749.9 | protein_coding | 4/8 | chr2 | 174756660 | ||||||
|
chr2:174756740
|
G | T | 1 | a0001c0001t0001g0137 | 1 | NA18954.hp1 | intron_variant | MODIFIER | c.344+826C>A | CHRNA1 | ENSG00000138435.16 | transcript | ENST00000348749.9 | protein_coding | 4/8 | chr2 | 174756740 | ||||||
|
chr2:174756754
|
C | T | 113 | a0001c0001t0001g0001a0001c0001t0001g0002a0001c0001t0001g0004others(110): Show | 281 | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(278): Show |
intron_variant | MODIFIER | c.344+812G>A | CHRNA1 | ENSG00000138435.16 | transcript | ENST00000348749.9 | protein_coding | 4/8 | chr2 | 174756754 | ||||||
|
chr2:174756901
|
G | A | 3 | a0001c0001t0001g0058a0001c0001t0002g0050a0001c0001t0002g0059 | 3 | HG01891.hp2 HG02895.hp2 HG03041.hp2 |
intron_variant | MODIFIER | c.344+665C>T | CHRNA1 | ENSG00000138435.16 | transcript | ENST00000348749.9 | protein_coding | 4/8 | chr2 | 174756901 | ||||||
|
chr2:174756957
|
C | T | 1 | a0004c0005t0003g0037 | 2 | HG02258.hp1 HG03579.hp1 |
intron_variant | MODIFIER | c.344+609G>A | CHRNA1 | ENSG00000138435.16 | transcript | ENST00000348749.9 | protein_coding | 4/8 | chr2 | 174756957 | ||||||
|
chr2:174757086
|
A | G | 1 | a0001c0002t0001g0016 | 3 | HG02257.hp1 HG02896.hp2 NA19030.hp2 |
intron_variant | MODIFIER | c.344+480T>C | CHRNA1 | ENSG00000138435.16 | transcript | ENST00000348749.9 | protein_coding | 4/8 | chr2 | 174757086 | ||||||
|
chr2:174757118
|
A | G | 143 | a0001c0001t0001g0001a0001c0001t0001g0002a0001c0001t0001g0004others(140): Show | 328 | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(325): Show |
intron_variant | MODIFIER | c.344+448T>C | CHRNA1 | ENSG00000138435.16 | transcript | ENST00000348749.9 | protein_coding | 4/8 | chr2 | 174757118 | ||||||
|
chr2:174757152
|
G | A | 1 | a0001c0001t0001g0065 | 1 | HG03453.hp1 | intron_variant | MODIFIER | c.344+414C>T | CHRNA1 | ENSG00000138435.16 | transcript | ENST00000348749.9 | protein_coding | 4/8 | chr2 | 174757152 | ||||||
|
chr2:174757249
|
C | T | 5 | a0001c0001t0001g0021a0001c0001t0001g0039a0001c0001t0001g0040others(2): Show | 9 | HG01891.hp1 HG02486.hp2 HG02572.hp1 others(6): Show |
intron_variant | MODIFIER | c.344+317G>A | CHRNA1 | ENSG00000138435.16 | transcript | ENST00000348749.9 | protein_coding | 4/8 | chr2 | 174757249 | ||||||
|
chr2:174757284
|
C | T | 5 | a0001c0001t0001g0065a0001c0002t0001g0016a0001c0002t0001g0062others(2): Show | 7 | HG02257.hp1 HG02559.hp1 HG02896.hp2 others(4): Show |
intron_variant | MODIFIER | c.344+282G>A | CHRNA1 | ENSG00000138435.16 | transcript | ENST00000348749.9 | protein_coding | 4/8 | chr2 | 174757284 | ||||||
|
chr2:174757319
|
A | AT | 31 | a0001c0001t0001g0023a0001c0001t0001g0025a0001c0001t0001g0065others(28): Show | 49 | HG00609.hp2 HG00639.hp2 HG01069.hp2 others(46): Show |
intron_variant | MODIFIER | c.344+246dupA | CHRNA1 | ENSG00000138435.16 | transcript | ENST00000348749.9 | protein_coding | 4/8 | chr2 | 174757319 | ||||||
|
chr2:174757330
|
T | A | 5 | a0001c0001t0001g0021a0001c0001t0001g0039a0001c0001t0001g0040others(2): Show | 9 | HG01891.hp1 HG02486.hp2 HG02572.hp1 others(6): Show |
intron_variant | MODIFIER | c.344+236A>T | CHRNA1 | ENSG00000138435.16 | transcript | ENST00000348749.9 | protein_coding | 4/8 | chr2 | 174757330 | ||||||
|
chr2:174757413
|
C | A | 1 | a0001c0001t0001g0119 | 1 | NA18992.hp1 | intron_variant | MODIFIER | c.344+153G>T | CHRNA1 | ENSG00000138435.16 | transcript | ENST00000348749.9 | protein_coding | 4/8 | chr2 | 174757413 | ||||||
|
chr2:174757450
|
TG | T | 110 | a0001c0001t0001g0001a0001c0001t0001g0002a0001c0001t0001g0004others(107): Show | 277 | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(274): Show |
intron_variant | MODIFIER | c.344+115delC | CHRNA1 | ENSG00000138435.16 | transcript | ENST00000348749.9 | protein_coding | 4/8 | chr2 | 174757450 | ||||||
|
chr2:174757491
|
G | A | 1 | a0001c0001t0001g0160 | 1 | HG03669.hp2 | intron_variant | MODIFIER | c.344+75C>T | CHRNA1 | ENSG00000138435.16 | transcript | ENST00000348749.9 | protein_coding | 4/8 | chr2 | 174757491 | ||||||
|
chr2:174757858
|
C | T | 1 | a0001c0001t0001g0022 | 2 | HG03491.hp1 HG03492.hp1 |
intron_variant | MODIFIER | c.235-183G>A | CHRNA1 | ENSG00000138435.16 | transcript | ENST00000348749.9 | protein_coding | 3/8 | chr2 | 174757858 | ||||||
|
chr2:174758060
|
G | A | 170 | a0001c0001t0001g0001a0001c0001t0001g0002a0001c0001t0001g0004others(167): Show | 369 | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(366): Show |
intron_variant | MODIFIER | c.235-385C>T | CHRNA1 | ENSG00000138435.16 | transcript | ENST00000348749.9 | protein_coding | 3/8 | chr2 | 174758060 | ||||||
|
chr2:174758075
|
G | A | 1 | a0001c0001t0001g0091 | 1 | HG03516.hp2 | intron_variant | MODIFIER | c.235-400C>T | CHRNA1 | ENSG00000138435.16 | transcript | ENST00000348749.9 | protein_coding | 3/8 | chr2 | 174758075 | ||||||
|
chr2:174758097
|
C | A | 5 | a0001c0001t0001g0021a0001c0001t0001g0039a0001c0001t0001g0040others(2): Show | 9 | HG01891.hp1 HG02486.hp2 HG02572.hp1 others(6): Show |
intron_variant | MODIFIER | c.235-422G>T | CHRNA1 | ENSG00000138435.16 | transcript | ENST00000348749.9 | protein_coding | 3/8 | chr2 | 174758097 | ||||||
|
chr2:174758179
|
T | C | 148 | a0001c0001t0001g0001a0001c0001t0001g0002a0001c0001t0001g0004others(145): Show | 337 | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(334): Show |
intron_variant | MODIFIER | c.235-504A>G | CHRNA1 | ENSG00000138435.16 | transcript | ENST00000348749.9 | protein_coding | 3/8 | chr2 | 174758179 | ||||||
|
chr2:174758193
|
G | C | 3 | a0001c0001t0001g0134a0003c0004t0001g0028a0003c0004t0001g0096 | 4 | HG02559.hp2 HG02717.hp2 HG03471.hp2 others(1): Show |
intron_variant | MODIFIER | c.235-518C>G | CHRNA1 | ENSG00000138435.16 | transcript | ENST00000348749.9 | protein_coding | 3/8 | chr2 | 174758193 | ||||||
|
chr2:174758264
|
C | A | 6 | a0001c0001t0001g0099a0001c0002t0001g0024a0002c0003t0001g0008others(3): Show | 11 | HG02055.hp1 HG02055.hp2 HG02280.hp1 others(8): Show |
intron_variant | MODIFIER | c.235-589G>T | CHRNA1 | ENSG00000138435.16 | transcript | ENST00000348749.9 | protein_coding | 3/8 | chr2 | 174758264 | ||||||
|
chr2:174758266
|
G | A | 1 | a0005c0014t0001g0135 | 1 | HG03579.hp2 | intron_variant | MODIFIER | c.235-591C>T | CHRNA1 | ENSG00000138435.16 | transcript | ENST00000348749.9 | protein_coding | 3/8 | chr2 | 174758266 | ||||||
|
chr2:174758269
|
C | T | 1 | a0001c0001t0001g0146 | 1 | HG00323.hp1 | intron_variant | MODIFIER | c.235-594G>A | CHRNA1 | ENSG00000138435.16 | transcript | ENST00000348749.9 | protein_coding | 3/8 | chr2 | 174758269 | ||||||
|
chr2:174758353
|
G | T | 1 | a0001c0001t0001g0127 | 1 | HG03225.hp2 | intron_variant | MODIFIER | c.235-678C>A | CHRNA1 | ENSG00000138435.16 | transcript | ENST00000348749.9 | protein_coding | 3/8 | chr2 | 174758353 | ||||||
|
chr2:174758470
|
A | G | 10 | a0001c0001t0001g0011a0001c0001t0001g0012a0001c0001t0001g0015others(7): Show | 19 | HG02109.hp1 HG02258.hp2 HG02886.hp1 others(16): Show |
intron_variant | MODIFIER | c.235-795T>C | CHRNA1 | ENSG00000138435.16 | transcript | ENST00000348749.9 | protein_coding | 3/8 | chr2 | 174758470 | ||||||
|
chr2:174758642
|
GA | G | 48 | a0001c0001t0001g0001a0001c0001t0001g0004a0001c0001t0001g0009others(45): Show | 138 | HG00099.hp2 HG00140.hp1 HG00280.hp2 others(135): Show |
intron_variant | MODIFIER | c.234+688delT | CHRNA1 | ENSG00000138435.16 | transcript | ENST00000348749.9 | protein_coding | 3/8 | chr2 | 174758642 | ||||||
|
chr2:174758738
|
G | A | 2 | a0003c0004t0001g0028a0003c0004t0001g0096 | 3 | HG02559.hp2 HG02717.hp2 HG03471.hp2 |
intron_variant | MODIFIER | c.234+593C>T | CHRNA1 | ENSG00000138435.16 | transcript | ENST00000348749.9 | protein_coding | 3/8 | chr2 | 174758738 | ||||||
|
chr2:174758968
|
G | GC | 3 | a0001c0001t0001g0134a0003c0004t0001g0028a0003c0004t0001g0096 | 4 | HG02559.hp2 HG02717.hp2 HG03471.hp2 others(1): Show |
intron_variant | MODIFIER | c.234+362_234+363ins others(1): Show |
CHRNA1 | ENSG00000138435.16 | transcript | ENST00000348749.9 | protein_coding | 3/8 | chr2 | 174758968 | ||||||
|
chr2:174758971
|
A | T | 3 | a0001c0001t0001g0134a0003c0004t0001g0028a0003c0004t0001g0096 | 4 | HG02559.hp2 HG02717.hp2 HG03471.hp2 others(1): Show |
intron_variant | MODIFIER | c.234+360T>A | CHRNA1 | ENSG00000138435.16 | transcript | ENST00000348749.9 | protein_coding | 3/8 | chr2 | 174758971 | ||||||
|
chr2:174759035
|
C | T | 110 | a0001c0001t0001g0001a0001c0001t0001g0002a0001c0001t0001g0004others(107): Show | 277 | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(274): Show |
intron_variant | MODIFIER | c.234+296G>A | CHRNA1 | ENSG00000138435.16 | transcript | ENST00000348749.9 | protein_coding | 3/8 | chr2 | 174759035 | ||||||
|
chr2:174759298
|
A | G | 1 | a0001c0002t0001g0063 | 1 | HG02922.hp1 | intron_variant | MODIFIER | c.234+33T>C | CHRNA1 | ENSG00000138435.16 | transcript | ENST00000348749.9 | protein_coding | 3/8 | chr2 | 174759298 | ||||||
|
chr2:174759379
|
GA | G | 39 | a0001c0001t0001g0002a0001c0001t0001g0005a0001c0001t0001g0006others(36): Show | 102 | HG00099.hp1 HG00140.hp2 HG00280.hp1 others(99): Show |
splice_region_variant&intron_variant | LOW | c.190-5delT | CHRNA1 | ENSG00000138435.16 | transcript | ENST00000348749.9 | protein_coding | 2/8 | chr2 | 174759379 | ||||||
|
chr2:174759751
|
C | T | 18 | a0001c0002t0001g0003a0001c0002t0001g0026a0001c0002t0001g0066others(15): Show | 31 | HG00609.hp2 HG00639.hp2 HG01069.hp2 others(28): Show |
intron_variant | MODIFIER | c.44-118G>A | CHRNA1 | ENSG00000138435.16 | transcript | ENST00000348749.9 | protein_coding | 1/8 | chr2 | 174759751 | ||||||
|
chr2:174759868
|
C | T | 10 | a0001c0001t0001g0011a0001c0001t0001g0012a0001c0001t0001g0015others(7): Show | 19 | HG02109.hp1 HG02258.hp2 HG02886.hp1 others(16): Show |
intron_variant | MODIFIER | c.44-235G>A | CHRNA1 | ENSG00000138435.16 | transcript | ENST00000348749.9 | protein_coding | 1/8 | chr2 | 174759868 | ||||||
|
chr2:174759869
|
G | A | 103 | a0001c0001t0001g0001a0001c0001t0001g0002a0001c0001t0001g0004others(100): Show | 262 | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(259): Show |
intron_variant | MODIFIER | c.44-236C>T | CHRNA1 | ENSG00000138435.16 | transcript | ENST00000348749.9 | protein_coding | 1/8 | chr2 | 174759869 | ||||||
|
chr2:174759879
|
T | C | 1 | a0001c0002t0001g0092 | 1 | NA18991.hp2 | intron_variant | MODIFIER | c.44-246A>G | CHRNA1 | ENSG00000138435.16 | transcript | ENST00000348749.9 | protein_coding | 1/8 | chr2 | 174759879 | ||||||
|
chr2:174759906
|
C | T | 1 | a0001c0001t0001g0120 | 1 | HG02071.hp2 | intron_variant | MODIFIER | c.44-273G>A | CHRNA1 | ENSG00000138435.16 | transcript | ENST00000348749.9 | protein_coding | 1/8 | chr2 | 174759906 | ||||||
|
chr2:174759929
|
T | TAC | 4 | a0001c0001t0001g0012a0001c0001t0001g0055a0001c0002t0001g0080others(1): Show | 7 | HG02109.hp1 HG06807.hp1 NA18998.hp2 others(4): Show |
intron_variant | MODIFIER | c.44-298_44-297dupGT | CHRNA1 | ENSG00000138435.16 | transcript | ENST00000348749.9 | protein_coding | 1/8 | chr2 | 174759929 | ||||||
|
chr2:174759929
|
T | TACACAC | 14 | a0001c0001t0001g0017a0001c0001t0001g0058a0001c0001t0001g0068others(11): Show | 16 | HG01496.hp1 HG01891.hp2 HG02109.hp2 others(13): Show |
intron_variant | MODIFIER | c.44-302_44-297dupGT others(4): Show |
CHRNA1 | ENSG00000138435.16 | transcript | ENST00000348749.9 | protein_coding | 1/8 | chr2 | 174759929 | ||||||
|
chr2:174759929
|
T | TACACACA others(1): Show |
2 | a0001c0001t0001g0013a0001c0001t0001g0087 | 5 | HG02895.hp1 HG02897.hp1 HG02976.hp2 others(2): Show |
intron_variant | MODIFIER | c.44-304_44-297dupGT others(6): Show |
CHRNA1 | ENSG00000138435.16 | transcript | ENST00000348749.9 | protein_coding | 1/8 | chr2 | 174759929 | ||||||
|
chr2:174759929
|
T | TACACACA others(3): Show |
1 | a0001c0001t0001g0021 | 3 | HG01891.hp1 HG02572.hp1 HG02723.hp2 |
intron_variant | MODIFIER | c.44-306_44-297dupGT others(8): Show |
CHRNA1 | ENSG00000138435.16 | transcript | ENST00000348749.9 | protein_coding | 1/8 | chr2 | 174759929 | ||||||
|
chr2:174759929
|
T | TACACACA others(5): Show |
3 | a0001c0001t0001g0039a0001c0001t0001g0138a0001c0002t0001g0064 | 4 | HG02559.hp1 HG02615.hp2 HG02809.hp1 others(1): Show |
intron_variant | MODIFIER | c.44-308_44-297dupGT others(10): Show |
CHRNA1 | ENSG00000138435.16 | transcript | ENST00000348749.9 | protein_coding | 1/8 | chr2 | 174759929 | ||||||
|
chr2:174759929
|
T | TACACACA others(7): Show |
2 | a0001c0001t0001g0040a0001c0001t0001g0139 | 3 | HG02486.hp2 HG02896.hp1 HG02897.hp2 |
intron_variant | MODIFIER | c.44-310_44-297dupGT others(12): Show |
CHRNA1 | ENSG00000138435.16 | transcript | ENST00000348749.9 | protein_coding | 1/8 | chr2 | 174759929 | ||||||
|
chr2:174759929
|
TAC | T | 48 | a0001c0001t0001g0001a0001c0001t0001g0004a0001c0001t0001g0009others(45): Show | 134 | HG00099.hp2 HG00140.hp1 HG00280.hp2 others(131): Show |
intron_variant | MODIFIER | c.44-298_44-297delGT | CHRNA1 | ENSG00000138435.16 | transcript | ENST00000348749.9 | protein_coding | 1/8 | chr2 | 174759929 | ||||||
|
chr2:174759929
|
TACAC | T | 46 | a0001c0001t0001g0002a0001c0001t0001g0005a0001c0001t0001g0006others(43): Show | 112 | HG00099.hp1 HG00140.hp2 HG00280.hp1 others(109): Show |
intron_variant | MODIFIER | c.44-300_44-297delGT others(2): Show |
CHRNA1 | ENSG00000138435.16 | transcript | ENST00000348749.9 | protein_coding | 1/8 | chr2 | 174759929 | ||||||
|
chr2:174759929
|
TACACACA others(3): Show |
T | 1 | a0001c0001t0001g0065 | 1 | HG03453.hp1 | intron_variant | MODIFIER | c.44-306_44-297delGT others(8): Show |
CHRNA1 | ENSG00000138435.16 | transcript | ENST00000348749.9 | protein_coding | 1/8 | chr2 | 174759929 | ||||||
|
chr2:174759947
|
C | T | 1 | a0001c0001t0001g0145 | 1 | NA18975.hp1 | intron_variant | MODIFIER | c.44-314G>A | CHRNA1 | ENSG00000138435.16 | transcript | ENST00000348749.9 | protein_coding | 1/8 | chr2 | 174759947 | ||||||
|
chr2:174760058
|
A | C | 1 | a0001c0001t0001g0103 | 1 | NA18957.hp2 | intron_variant | MODIFIER | c.44-425T>G | CHRNA1 | ENSG00000138435.16 | transcript | ENST00000348749.9 | protein_coding | 1/8 | chr2 | 174760058 | ||||||
|
chr2:174760222
|
A | G | 1 | a0001c0001t0001g0102 | 1 | NA19240.hp1 | intron_variant | MODIFIER | c.44-589T>C | CHRNA1 | ENSG00000138435.16 | transcript | ENST00000348749.9 | protein_coding | 1/8 | chr2 | 174760222 | ||||||
|
chr2:174760423
|
A | G | 1 | a0001c0001t0001g0081 | 1 | HG02698.hp2 | intron_variant | MODIFIER | c.44-790T>C | CHRNA1 | ENSG00000138435.16 | transcript | ENST00000348749.9 | protein_coding | 1/8 | chr2 | 174760423 | ||||||
|
chr2:174760550
|
G | C | 69 | a0001c0001t0001g0002a0001c0001t0001g0005a0001c0001t0001g0006others(66): Show | 148 | HG00099.hp1 HG00140.hp2 HG00280.hp1 others(145): Show |
intron_variant | MODIFIER | c.44-917C>G | CHRNA1 | ENSG00000138435.16 | transcript | ENST00000348749.9 | protein_coding | 1/8 | chr2 | 174760550 | ||||||
|
chr2:174760550
|
G | T | 1 | a0001c0001t0001g0144 | 1 | HG01515.hp2 | intron_variant | MODIFIER | c.44-917C>A | CHRNA1 | ENSG00000138435.16 | transcript | ENST00000348749.9 | protein_coding | 1/8 | chr2 | 174760550 | ||||||
|
chr2:174760614
|
C | T | 1 | a0004c0005t0003g0037 | 2 | HG02258.hp1 HG03579.hp1 |
intron_variant | MODIFIER | c.44-981G>A | CHRNA1 | ENSG00000138435.16 | transcript | ENST00000348749.9 | protein_coding | 1/8 | chr2 | 174760614 | ||||||
|
chr2:174760843
|
C | T | 1 | a0001c0001t0001g0143 | 1 | HG01993.hp2 | intron_variant | MODIFIER | c.44-1210G>A | CHRNA1 | ENSG00000138435.16 | transcript | ENST00000348749.9 | protein_coding | 1/8 | chr2 | 174760843 | ||||||
|
chr2:174760914
|
A | G | 70 | a0001c0001t0001g0002a0001c0001t0001g0005a0001c0001t0001g0006others(67): Show | 149 | HG00099.hp1 HG00140.hp2 HG00280.hp1 others(146): Show |
intron_variant | MODIFIER | c.44-1281T>C | CHRNA1 | ENSG00000138435.16 | transcript | ENST00000348749.9 | protein_coding | 1/8 | chr2 | 174760914 | ||||||
|
chr2:174761076
|
T | C | 1 | a0001c0001t0001g0122 | 1 | NA19085.hp1 | intron_variant | MODIFIER | c.44-1443A>G | CHRNA1 | ENSG00000138435.16 | transcript | ENST00000348749.9 | protein_coding | 1/8 | chr2 | 174761076 | ||||||
|
chr2:174761085
|
G | T | 1 | a0001c0001t0001g0142 | 1 | NA18970.hp1 | intron_variant | MODIFIER | c.44-1452C>A | CHRNA1 | ENSG00000138435.16 | transcript | ENST00000348749.9 | protein_coding | 1/8 | chr2 | 174761085 | ||||||
|
chr2:174761231
|
A | G | 1 | a0001c0001t0001g0141 | 1 | HG00639.hp1 | intron_variant | MODIFIER | c.44-1598T>C | CHRNA1 | ENSG00000138435.16 | transcript | ENST00000348749.9 | protein_coding | 1/8 | chr2 | 174761231 | ||||||
|
chr2:174761310
|
G | T | 1 | a0001c0001t0001g0140 | 1 | NA18962.hp1 | intron_variant | MODIFIER | c.44-1677C>A | CHRNA1 | ENSG00000138435.16 | transcript | ENST00000348749.9 | protein_coding | 1/8 | chr2 | 174761310 | ||||||
|
chr2:174761345
|
A | G | 1 | a0001c0002t0001g0070 | 1 | HG04184.hp1 | intron_variant | MODIFIER | c.44-1712T>C | CHRNA1 | ENSG00000138435.16 | transcript | ENST00000348749.9 | protein_coding | 1/8 | chr2 | 174761345 | ||||||
|
chr2:174761455
|
T | G | 13 | a0001c0001t0001g0013a0001c0001t0001g0017a0001c0001t0001g0068others(10): Show | 18 | HG01496.hp1 HG02109.hp2 HG02451.hp1 others(15): Show |
intron_variant | MODIFIER | c.44-1822A>C | CHRNA1 | ENSG00000138435.16 | transcript | ENST00000348749.9 | protein_coding | 1/8 | chr2 | 174761455 | ||||||
|
chr2:174761461
|
C | T | 1 | a0001c0001t0001g0140 | 1 | NA18962.hp1 | intron_variant | MODIFIER | c.44-1828G>A | CHRNA1 | ENSG00000138435.16 | transcript | ENST00000348749.9 | protein_coding | 1/8 | chr2 | 174761461 | ||||||
|
chr2:174761622
|
C | T | 1 | a0001c0002t0001g0074 | 1 | HG01099.hp1 | intron_variant | MODIFIER | c.44-1989G>A | CHRNA1 | ENSG00000138435.16 | transcript | ENST00000348749.9 | protein_coding | 1/8 | chr2 | 174761622 | ||||||
|
chr2:174761783
|
T | C | 1 | a0001c0007t0008g0168 | 1 | NA21309.hp2 | intron_variant | MODIFIER | c.44-2150A>G | CHRNA1 | ENSG00000138435.16 | transcript | ENST00000348749.9 | protein_coding | 1/8 | chr2 | 174761783 | ||||||
|
chr2:174761874
|
T | G | 5 | a0001c0001t0001g0021a0001c0001t0001g0039a0001c0001t0001g0040others(2): Show | 9 | HG01891.hp1 HG02486.hp2 HG02572.hp1 others(6): Show |
intron_variant | MODIFIER | c.44-2241A>C | CHRNA1 | ENSG00000138435.16 | transcript | ENST00000348749.9 | protein_coding | 1/8 | chr2 | 174761874 | ||||||
|
chr2:174761968
|
A | G | 6 | a0001c0001t0001g0099a0001c0002t0001g0024a0002c0003t0001g0008others(3): Show | 11 | HG02055.hp1 HG02055.hp2 HG02280.hp1 others(8): Show |
intron_variant | MODIFIER | c.44-2335T>C | CHRNA1 | ENSG00000138435.16 | transcript | ENST00000348749.9 | protein_coding | 1/8 | chr2 | 174761968 | ||||||
|
chr2:174761980
|
G | A | 1 | a0001c0001t0001g0065 | 1 | HG03453.hp1 | intron_variant | MODIFIER | c.44-2347C>T | CHRNA1 | ENSG00000138435.16 | transcript | ENST00000348749.9 | protein_coding | 1/8 | chr2 | 174761980 | ||||||
|
chr2:174762285
|
T | G | 1 | a0005c0014t0001g0135 | 1 | HG03579.hp2 | intron_variant | MODIFIER | c.43+2067A>C | CHRNA1 | ENSG00000138435.16 | transcript | ENST00000348749.9 | protein_coding | 1/8 | chr2 | 174762285 | ||||||
|
chr2:174762320
|
T | C | 87 | a0001c0001t0001g0001a0001c0001t0001g0004a0001c0001t0001g0009others(84): Show | 200 | HG00099.hp2 HG00140.hp1 HG00280.hp2 others(197): Show |
intron_variant | MODIFIER | c.43+2032A>G | CHRNA1 | ENSG00000138435.16 | transcript | ENST00000348749.9 | protein_coding | 1/8 | chr2 | 174762320 | ||||||
|
chr2:174762447
|
A | C | 19 | a0001c0001t0001g0011a0001c0001t0001g0012a0001c0001t0001g0015others(16): Show | 33 | HG01891.hp2 HG02055.hp1 HG02055.hp2 others(30): Show |
intron_variant | MODIFIER | c.43+1905T>G | CHRNA1 | ENSG00000138435.16 | transcript | ENST00000348749.9 | protein_coding | 1/8 | chr2 | 174762447 | ||||||
|
chr2:174762609
|
A | G | 5 | a0001c0001t0001g0021a0001c0001t0001g0039a0001c0001t0001g0040others(2): Show | 9 | HG01891.hp1 HG02486.hp2 HG02572.hp1 others(6): Show |
intron_variant | MODIFIER | c.43+1743T>C | CHRNA1 | ENSG00000138435.16 | transcript | ENST00000348749.9 | protein_coding | 1/8 | chr2 | 174762609 | ||||||
|
chr2:174762619
|
C | G | 1 | a0001c0001t0001g0100 | 1 | NA19081.hp1 | intron_variant | MODIFIER | c.43+1733G>C | CHRNA1 | ENSG00000138435.16 | transcript | ENST00000348749.9 | protein_coding | 1/8 | chr2 | 174762619 | ||||||
|
chr2:174762821
|
C | G | 6 | a0001c0001t0001g0099a0001c0002t0001g0024a0002c0003t0001g0008others(3): Show | 11 | HG02055.hp1 HG02055.hp2 HG02280.hp1 others(8): Show |
intron_variant | MODIFIER | c.43+1531G>C | CHRNA1 | ENSG00000138435.16 | transcript | ENST00000348749.9 | protein_coding | 1/8 | chr2 | 174762821 | ||||||
|
chr2:174762902
|
A | T | 48 | a0001c0001t0001g0002a0001c0001t0001g0005a0001c0001t0001g0006others(45): Show | 118 | HG00099.hp1 HG00140.hp2 HG00280.hp1 others(115): Show |
intron_variant | MODIFIER | c.43+1450T>A | CHRNA1 | ENSG00000138435.16 | transcript | ENST00000348749.9 | protein_coding | 1/8 | chr2 | 174762902 | ||||||
|
chr2:174762908
|
C | T | 42 | a0001c0001t0001g0002a0001c0001t0001g0005a0001c0001t0001g0006others(39): Show | 107 | HG00099.hp1 HG00140.hp2 HG00280.hp1 others(104): Show |
intron_variant | MODIFIER | c.43+1444G>A | CHRNA1 | ENSG00000138435.16 | transcript | ENST00000348749.9 | protein_coding | 1/8 | chr2 | 174762908 | ||||||
|
chr2:174763051
|
C | A | 1 | a0001c0001t0001g0123 | 1 | HG00673.hp2 | intron_variant | MODIFIER | c.43+1301G>T | CHRNA1 | ENSG00000138435.16 | transcript | ENST00000348749.9 | protein_coding | 1/8 | chr2 | 174763051 | ||||||
|
chr2:174763051
|
CA | C | 21 | a0001c0001t0001g0090a0001c0001t0001g0091a0001c0002t0001g0003others(18): Show | 34 | HG00609.hp2 HG00639.hp2 HG01069.hp2 others(31): Show |
intron_variant | MODIFIER | c.43+1300delT | CHRNA1 | ENSG00000138435.16 | transcript | ENST00000348749.9 | protein_coding | 1/8 | chr2 | 174763051 | ||||||
|
chr2:174763128
|
C | T | 107 | a0001c0001t0001g0001a0001c0001t0001g0002a0001c0001t0001g0004others(104): Show | 270 | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(267): Show |
intron_variant | MODIFIER | c.43+1224G>A | CHRNA1 | ENSG00000138435.16 | transcript | ENST00000348749.9 | protein_coding | 1/8 | chr2 | 174763128 | ||||||
|
chr2:174763322
|
ACG | A | 28 | a0001c0001t0001g0011a0001c0001t0001g0012a0001c0001t0001g0014others(25): Show | 41 | HG01074.hp1 HG01891.hp2 HG02109.hp1 others(38): Show |
intron_variant | MODIFIER | c.43+1028_43+1029del others(2): Show |
CHRNA1 | ENSG00000138435.16 | transcript | ENST00000348749.9 | protein_coding | 1/8 | chr2 | 174763322 | ||||||
|
chr2:174763322
|
ACGCG | A | 4 | a0001c0001t0001g0035a0001c0001t0001g0036a0001c0001t0001g0095others(1): Show | 6 | HG02451.hp2 HG02809.hp2 HG02922.hp2 others(3): Show |
intron_variant | MODIFIER | c.43+1026_43+1029del others(4): Show |
CHRNA1 | ENSG00000138435.16 | transcript | ENST00000348749.9 | protein_coding | 1/8 | chr2 | 174763322 | ||||||
|
chr2:174763326
|
GCGCGCA | G | 46 | a0001c0001t0001g0001a0001c0001t0001g0004a0001c0001t0001g0009others(43): Show | 136 | HG00099.hp2 HG00140.hp1 HG00280.hp2 others(133): Show |
intron_variant | MODIFIER | c.43+1020_43+1025del others(6): Show |
CHRNA1 | ENSG00000138435.16 | transcript | ENST00000348749.9 | protein_coding | 1/8 | chr2 | 174763326 | ||||||
|
chr2:174763326
|
GCGCGCAC others(1): Show |
G | 2 | a0001c0001t0001g0018a0001c0001t0001g0136 | 4 | HG02040.hp1 HG02132.hp2 NA18612.hp2 others(1): Show |
intron_variant | MODIFIER | c.43+1018_43+1025del others(8): Show |
CHRNA1 | ENSG00000138435.16 | transcript | ENST00000348749.9 | protein_coding | 1/8 | chr2 | 174763326 | ||||||
|
chr2:174763326
|
GCGCGCAC others(3): Show |
G | 1 | a0001c0001t0001g0097 | 1 | HG01123.hp2 | intron_variant | MODIFIER | c.43+1016_43+1025del others(10): Show |
CHRNA1 | ENSG00000138435.16 | transcript | ENST00000348749.9 | protein_coding | 1/8 | chr2 | 174763326 | ||||||
|
chr2:174763328
|
G | A | 2 | a0001c0001t0001g0134a0005c0014t0001g0135 | 2 | HG03579.hp2 NA20129.hp2 |
intron_variant | MODIFIER | c.43+1024C>T | CHRNA1 | ENSG00000138435.16 | transcript | ENST00000348749.9 | protein_coding | 1/8 | chr2 | 174763328 | ||||||
|
chr2:174763328
|
G | GCA | 7 | a0001c0001t0001g0017a0001c0001t0009g0171a0001c0002t0001g0026others(4): Show | 10 | HG01884.hp1 HG02109.hp2 HG02647.hp2 others(7): Show |
intron_variant | MODIFIER | c.43+1023_43+1024ins others(2): Show |
CHRNA1 | ENSG00000138435.16 | transcript | ENST00000348749.9 | protein_coding | 1/8 | chr2 | 174763328 | ||||||
|
chr2:174763328
|
G | GCACA | 15 | a0001c0001t0001g0081a0001c0001t0001g0083a0001c0001t0001g0084others(12): Show | 27 | HG00609.hp2 HG01069.hp2 HG01081.hp1 others(24): Show |
intron_variant | MODIFIER | c.43+1023_43+1024ins others(4): Show |
CHRNA1 | ENSG00000138435.16 | transcript | ENST00000348749.9 | protein_coding | 1/8 | chr2 | 174763328 | ||||||
|
chr2:174763328
|
G | GCACACA | 7 | a0001c0001t0001g0090a0001c0001t0001g0091a0001c0001t0001g0094others(4): Show | 7 | HG01884.hp2 HG02970.hp1 HG03516.hp2 others(4): Show |
intron_variant | MODIFIER | c.43+1023_43+1024ins others(6): Show |
CHRNA1 | ENSG00000138435.16 | transcript | ENST00000348749.9 | protein_coding | 1/8 | chr2 | 174763328 | ||||||
|
chr2:174763328
|
GCGCA | G | 41 | a0001c0001t0001g0002a0001c0001t0001g0005a0001c0001t0001g0006others(38): Show | 110 | HG00099.hp1 HG00140.hp2 HG00280.hp1 others(107): Show |
intron_variant | MODIFIER | c.43+1020_43+1023del others(4): Show |
CHRNA1 | ENSG00000138435.16 | transcript | ENST00000348749.9 | protein_coding | 1/8 | chr2 | 174763328 | ||||||
|
chr2:174763330
|
G | A | 46 | a0001c0001t0001g0013a0001c0001t0001g0014a0001c0001t0001g0017others(43): Show | 68 | HG00609.hp2 HG00639.hp2 HG01069.hp2 others(65): Show |
intron_variant | MODIFIER | c.43+1022C>T | CHRNA1 | ENSG00000138435.16 | transcript | ENST00000348749.9 | protein_coding | 1/8 | chr2 | 174763330 | ||||||
|
chr2:174763330
|
G | GCACA | 2 | a0003c0004t0001g0028a0003c0004t0001g0096 | 3 | HG02559.hp2 HG02717.hp2 HG03471.hp2 |
intron_variant | MODIFIER | c.43+1018_43+1021dup others(4): Show |
CHRNA1 | ENSG00000138435.16 | transcript | ENST00000348749.9 | protein_coding | 1/8 | chr2 | 174763330 | ||||||
|
chr2:174763344
|
A | G | 13 | a0001c0001t0001g0011a0001c0001t0001g0012a0001c0001t0001g0015others(10): Show | 22 | HG01891.hp2 HG02109.hp1 HG02258.hp2 others(19): Show |
intron_variant | MODIFIER | c.43+1008T>C | CHRNA1 | ENSG00000138435.16 | transcript | ENST00000348749.9 | protein_coding | 1/8 | chr2 | 174763344 | ||||||
|
chr2:174763441
|
A | G | 3 | a0001c0007t0008g0168a0003c0004t0001g0028a0003c0004t0001g0096 | 4 | HG02559.hp2 HG02717.hp2 HG03471.hp2 others(1): Show |
intron_variant | MODIFIER | c.43+911T>C | CHRNA1 | ENSG00000138435.16 | transcript | ENST00000348749.9 | protein_coding | 1/8 | chr2 | 174763441 | ||||||
|
chr2:174763444
|
G | C | 1 | a0001c0001t0001g0012 | 4 | HG02109.hp1 HG06807.hp1 NA19240.hp2 others(1): Show |
intron_variant | MODIFIER | c.43+908C>G | CHRNA1 | ENSG00000138435.16 | transcript | ENST00000348749.9 | protein_coding | 1/8 | chr2 | 174763444 | ||||||
|
chr2:174763716
|
A | G | 2 | a0001c0001t0001g0023a0001c0001t0001g0060 | 3 | HG03098.hp1 HG03486.hp2 NA19043.hp2 |
intron_variant | MODIFIER | c.43+636T>C | CHRNA1 | ENSG00000138435.16 | transcript | ENST00000348749.9 | protein_coding | 1/8 | chr2 | 174763716 | ||||||
|
chr2:174763748
|
T | TA | 6 | a0001c0001t0001g0038a0001c0001t0001g0095a0001c0001t0001g0136others(3): Show | 7 | HG02040.hp1 HG02257.hp2 HG03098.hp2 others(4): Show |
intron_variant | MODIFIER | c.43+603dupT | CHRNA1 | ENSG00000138435.16 | transcript | ENST00000348749.9 | protein_coding | 1/8 | chr2 | 174763748 | ||||||
|
chr2:174763749
|
A | T | 1 | a0001c0002t0001g0027 | 2 | HG01167.hp1 HG01169.hp1 |
intron_variant | MODIFIER | c.43+603T>A | CHRNA1 | ENSG00000138435.16 | transcript | ENST00000348749.9 | protein_coding | 1/8 | chr2 | 174763749 | ||||||
|
chr2:174763815
|
A | T | 1 | a0001c0001t0001g0095 | 1 | NA18976.hp2 | intron_variant | MODIFIER | c.43+537T>A | CHRNA1 | ENSG00000138435.16 | transcript | ENST00000348749.9 | protein_coding | 1/8 | chr2 | 174763815 | ||||||
|
chr2:174763817
|
T | A | 1 | a0001c0001t0001g0095 | 1 | NA18976.hp2 | intron_variant | MODIFIER | c.43+535A>T | CHRNA1 | ENSG00000138435.16 | transcript | ENST00000348749.9 | protein_coding | 1/8 | chr2 | 174763817 | ||||||
|
chr2:174763822
|
A | T | 1 | a0001c0001t0001g0095 | 1 | NA18976.hp2 | intron_variant | MODIFIER | c.43+530T>A | CHRNA1 | ENSG00000138435.16 | transcript | ENST00000348749.9 | protein_coding | 1/8 | chr2 | 174763822 | ||||||
|
chr2:174763825
|
A | T | 2 | a0001c0001t0001g0056a0001c0001t0001g0095 | 2 | NA18976.hp1 NA18976.hp2 |
intron_variant | MODIFIER | c.43+527T>A | CHRNA1 | ENSG00000138435.16 | transcript | ENST00000348749.9 | protein_coding | 1/8 | chr2 | 174763825 | ||||||
|
chr2:174763827
|
T | C | 2 | a0001c0001t0001g0056a0001c0001t0001g0095 | 2 | NA18976.hp1 NA18976.hp2 |
intron_variant | MODIFIER | c.43+525A>G | CHRNA1 | ENSG00000138435.16 | transcript | ENST00000348749.9 | protein_coding | 1/8 | chr2 | 174763827 | ||||||
|
chr2:174763827
|
T | TTC | 124 | a0001c0001t0001g0001a0001c0001t0001g0002a0001c0001t0001g0004others(121): Show | 300 | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(297): Show |
intron_variant | MODIFIER | c.43+524_43+525insGA | CHRNA1 | ENSG00000138435.16 | transcript | ENST00000348749.9 | protein_coding | 1/8 | chr2 | 174763827 | ||||||
|
chr2:174763895
|
A | G | 13 | a0001c0001t0001g0011a0001c0001t0001g0012a0001c0001t0001g0015others(10): Show | 22 | HG01891.hp2 HG02109.hp1 HG02258.hp2 others(19): Show |
intron_variant | MODIFIER | c.43+457T>C | CHRNA1 | ENSG00000138435.16 | transcript | ENST00000348749.9 | protein_coding | 1/8 | chr2 | 174763895 | ||||||
|
chr2:174764119
|
T | C | 170 | a0001c0001t0001g0001a0001c0001t0001g0002a0001c0001t0001g0004others(167): Show | 369 | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(366): Show |
intron_variant | MODIFIER | c.43+233A>G | CHRNA1 | ENSG00000138435.16 | transcript | ENST00000348749.9 | protein_coding | 1/8 | chr2 | 174764119 | ||||||
|
chr2:174764136
|
A | G | 11 | a0001c0001t0001g0011a0001c0001t0001g0012a0001c0001t0001g0015others(8): Show | 20 | HG01891.hp2 HG02109.hp1 HG02258.hp2 others(17): Show |
intron_variant | MODIFIER | c.43+216T>C | CHRNA1 | ENSG00000138435.16 | transcript | ENST00000348749.9 | protein_coding | 1/8 | chr2 | 174764136 | ||||||
|
chr2:174764157
|
G | C | 5 | a0001c0001t0001g0021a0001c0001t0001g0039a0001c0001t0001g0040others(2): Show | 9 | HG01891.hp1 HG02486.hp2 HG02572.hp1 others(6): Show |
intron_variant | MODIFIER | c.43+195C>G | CHRNA1 | ENSG00000138435.16 | transcript | ENST00000348749.9 | protein_coding | 1/8 | chr2 | 174764157 | ||||||
|
chr2:174764212
|
G | A | 1 | a0001c0001t0001g0164 | 1 | NA18953.hp2 | intron_variant | MODIFIER | c.43+140C>T | CHRNA1 | ENSG00000138435.16 | transcript | ENST00000348749.9 | protein_coding | 1/8 | chr2 | 174764212 | ||||||
|
chr2:174764243
|
G | A | 2 | a0001c0001t0001g0046a0001c0001t0001g0165 | 3 | NA18951.hp1 NA18979.hp2 NA19060.hp1 |
intron_variant | MODIFIER | c.43+109C>T | CHRNA1 | ENSG00000138435.16 | transcript | ENST00000348749.9 | protein_coding | 1/8 | chr2 | 174764243 | ||||||
|
chr2:174764288
|
G | T | 2 | a0001c0001t0001g0048a0001c0001t0001g0049 | 2 | NA18747.hp2 NA18978.hp1 |
intron_variant | MODIFIER | c.43+64C>A | CHRNA1 | ENSG00000138435.16 | transcript | ENST00000348749.9 | protein_coding | 1/8 | chr2 | 174764288 | ||||||
|
chr2:174764293
|
C | A | 40 | a0001c0001t0001g0002a0001c0001t0001g0005a0001c0001t0001g0006others(37): Show | 104 | HG00099.hp1 HG00140.hp2 HG00280.hp1 others(101): Show |
intron_variant | MODIFIER | c.43+59G>T | CHRNA1 | ENSG00000138435.16 | transcript | ENST00000348749.9 | protein_coding | 1/8 | chr2 | 174764293 | ||||||
|
chr2:174764307
|
G | A | 1 | a0001c0001t0001g0166 | 1 | HG04184.hp2 | intron_variant | MODIFIER | c.43+45C>T | CHRNA1 | ENSG00000138435.16 | transcript | ENST00000348749.9 | protein_coding | 1/8 | chr2 | 174764307 | ||||||
|
chr2:174764348
|
T | C | 1 | a0001c0001t0001g0167 | 1 | HG01081.hp2 | splice_region_variant&intron_variant | LOW | c.43+4A>G | CHRNA1 | ENSG00000138435.16 | transcript | ENST00000348749.9 | protein_coding | 1/8 | chr2 | 174764348 |