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ALDH2_chr12_111761933_111822532 / BRCA1_chr17_43039295_43130364 etc.

  Error connecting to IGV?   CNKSR2_chrX_21369418_21659689  CNKSR2_chrX_21369418_21659689 (clean+top1000)

Multiple Alignments (by translate haplotype frequency)Multiple Alignments (by aa haplotype frequency) Multiple Alignments (by translate haplotype similarity)Multiple Alignments (by aa haplotype similarity)

Item Value
geneid 22866
ensemblid ENSG00000149970.16
hgncid 19701
symbol CNKSR2
name connector enhancer of kinase suppressor of Ras 2
refseq_nuc NM_014927.5
refseq_prot NP_055742.2
ensembl_nuc ENST00000379510.5
ensembl_prot ENSP00000368824.3
mane_status MANE Select
chr chrX
start 21374418
end 21654689
strand +
ver v1.2
region chrX:21374418-21654689
region5000 chrX:21369418-21659689
regionname0 CNKSR2_chrX_21374418_21654689
regionname5000 CNKSR2_chrX_21369418_21659689

ahapid grch38/
chm13v2 		alen total AFR AMR EAS EUR SAS JPT regionname genename aa chr start end
a0001 1/1 1034 161 40 29 67 5 18 52 CNKSR2_chrX_21369418_21659689 CNKSR2 copy fasta chrX 21369418 21659689
a0002 0/0 1034 1 1 0 0 0 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 copy fasta chrX 21369418 21659689
a0003 0/0 1034 1 1 0 0 0 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 copy fasta chrX 21369418 21659689

chapid grch38/
chm13v2 		alen clen total AFR AMR EAS EUR SAS regionname genename cseq chr start end
c0001 1/1 3105 148 36 26 61 5 18 CNKSR2_chrX_21369418_21659689 CNKSR2 copy fasta chrX 21369418 21659689
c0002 0/0 3105 8 0 2 6 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 copy fasta chrX 21369418 21659689
c0003 0/0 3105 3 3 0 0 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 copy fasta chrX 21369418 21659689
c0004 0/0 3105 1 1 0 0 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 copy fasta chrX 21369418 21659689
c0005 0/0 3105 1 1 0 0 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 copy fasta chrX 21369418 21659689
c0006 0/0 3105 1 1 0 0 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 copy fasta chrX 21369418 21659689
c0007 0/0 3105 1 0 1 0 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 copy fasta chrX 21369418 21659689

thapid grch38
chm13v2 		tlen total AFR AMR EAS EUR SAS regionname genename tseq chr start end
t0001 0/0 2650 48 3 8 25 3 9 CNKSR2_chrX_21369418_21659689 CNKSR2 copy fasta chrX 21369418 21659689
t0002 0/0 2647 22 2 5 14 1 0 CNKSR2_chrX_21369418_21659689 CNKSR2 copy fasta chrX 21369418 21659689
t0003 0/0 2650 13 5 1 5 0 2 CNKSR2_chrX_21369418_21659689 CNKSR2 copy fasta chrX 21369418 21659689
t0004 0/1 2653 9 0 5 2 1 0 CNKSR2_chrX_21369418_21659689 CNKSR2 copy fasta chrX 21369418 21659689
t0005 1/0 2649 7 0 0 6 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 copy fasta chrX 21369418 21659689
t0006 0/0 2652 6 6 0 0 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 copy fasta chrX 21369418 21659689
t0007 0/0 2651 5 1 0 4 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 copy fasta chrX 21369418 21659689
t0008 0/0 2648 4 0 1 3 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 copy fasta chrX 21369418 21659689
t0009 0/0 2646 4 4 0 0 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 copy fasta chrX 21369418 21659689
t0010 0/0 2652 3 3 0 0 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 copy fasta chrX 21369418 21659689
t0011 0/0 2649 3 3 0 0 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 copy fasta chrX 21369418 21659689
t0012 0/0 2646 3 3 0 0 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 copy fasta chrX 21369418 21659689
t0013 0/0 2653 2 0 1 1 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 copy fasta chrX 21369418 21659689
t0014 0/0 2673 2 2 0 0 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 copy fasta chrX 21369418 21659689
t0015 0/0 2654 2 0 1 0 0 1 CNKSR2_chrX_21369418_21659689 CNKSR2 copy fasta chrX 21369418 21659689
t0016 0/0 2652 2 0 1 0 0 1 CNKSR2_chrX_21369418_21659689 CNKSR2 copy fasta chrX 21369418 21659689
t0017 0/0 2649 2 0 2 0 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 copy fasta chrX 21369418 21659689
t0018 0/0 2662 1 0 1 0 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 copy fasta chrX 21369418 21659689
t0019 0/0 2664 1 1 0 0 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 copy fasta chrX 21369418 21659689
t0020 0/0 2656 1 0 1 0 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 copy fasta chrX 21369418 21659689
t0021 0/0 2656 1 0 0 1 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 copy fasta chrX 21369418 21659689
t0022 0/0 2656 1 1 0 0 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 copy fasta chrX 21369418 21659689
t0023 0/0 2662 1 0 0 0 0 1 CNKSR2_chrX_21369418_21659689 CNKSR2 copy fasta chrX 21369418 21659689
t0024 0/0 2655 1 1 0 0 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 copy fasta chrX 21369418 21659689
t0025 0/0 2652 1 0 0 1 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 copy fasta chrX 21369418 21659689
t0026 0/0 2671 1 1 0 0 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 copy fasta chrX 21369418 21659689
t0027 0/0 2652 1 1 0 0 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 copy fasta chrX 21369418 21659689
t0028 0/0 2653 1 1 0 0 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 copy fasta chrX 21369418 21659689
t0029 0/0 2651 1 0 1 0 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 copy fasta chrX 21369418 21659689
t0030 0/0 2643 1 0 0 0 0 1 CNKSR2_chrX_21369418_21659689 CNKSR2 copy fasta chrX 21369418 21659689
t0031 0/0 2652 1 0 0 1 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 copy fasta chrX 21369418 21659689
t0032 0/0 2652 1 0 0 1 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 copy fasta chrX 21369418 21659689
t0033 0/0 2650 1 0 0 1 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 copy fasta chrX 21369418 21659689
t0034 0/0 2651 1 0 0 0 0 1 CNKSR2_chrX_21369418_21659689 CNKSR2 copy fasta chrX 21369418 21659689
t0035 0/0 2651 1 0 0 1 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 copy fasta chrX 21369418 21659689
t0036 0/0 2649 1 0 1 0 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 copy fasta chrX 21369418 21659689
t0037 0/0 2651 1 0 0 0 0 1 CNKSR2_chrX_21369418_21659689 CNKSR2 copy fasta chrX 21369418 21659689
t0038 0/0 2646 1 1 0 0 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 copy fasta chrX 21369418 21659689
t0039 0/0 2646 1 0 0 1 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 copy fasta chrX 21369418 21659689
t0040 0/0 2647 1 1 0 0 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 copy fasta chrX 21369418 21659689
t0041 0/0 2646 1 1 0 0 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 copy fasta chrX 21369418 21659689
t0042 0/0 2634 1 1 0 0 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 copy fasta chrX 21369418 21659689
t0043 0/0 2628 1 0 0 0 0 1 CNKSR2_chrX_21369418_21659689 CNKSR2 copy fasta chrX 21369418 21659689

ghapid grch38/
chm13v2 		total AFR AMR EAS EUR SAS regionname genename chr start end
g0001 0/0 1 0 0 1 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
g0002 0/0 1 0 0 1 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
g0003 0/0 1 0 0 1 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
g0004 0/0 1 0 1 0 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
g0005 0/0 1 0 1 0 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
g0006 0/0 1 0 0 0 0 1 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
g0007 0/0 1 0 0 0 0 1 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
g0008 0/0 1 1 0 0 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
g0009 0/0 1 1 0 0 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
g0010 0/0 1 1 0 0 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
g0011 0/0 1 1 0 0 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
g0012 0/0 1 1 0 0 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
g0013 0/0 1 1 0 0 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
g0014 0/0 1 1 0 0 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
g0015 0/0 1 1 0 0 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
g0016 0/0 1 1 0 0 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
g0017 0/0 1 1 0 0 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
g0018 0/0 1 0 1 0 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
g0019 0/0 1 0 1 0 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
g0020 0/0 1 0 1 0 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
g0021 0/0 1 0 1 0 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
g0022 0/0 1 0 0 1 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
g0023 0/0 1 0 1 0 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
g0024 0/0 1 1 0 0 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
g0025 0/0 1 1 0 0 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
g0026 0/0 1 0 1 0 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
g0027 0/0 1 1 0 0 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
g0028 0/0 1 1 0 0 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
g0029 0/0 1 1 0 0 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
g0030 0/0 1 1 0 0 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
g0031 0/0 1 1 0 0 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
g0032 0/0 1 0 0 0 0 1 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
g0033 0/0 1 1 0 0 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
g0034 0/0 1 1 0 0 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
g0035 0/0 1 0 0 1 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
g0036 0/0 1 0 0 0 0 1 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
g0037 0/0 1 0 0 1 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
g0038 0/0 1 0 0 0 0 1 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
g0039 0/0 1 0 1 0 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
g0040 0/0 1 0 0 1 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
g0041 0/0 1 0 0 1 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
g0042 0/0 1 0 1 0 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
g0043 0/0 1 1 0 0 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
g0044 0/0 1 0 0 0 0 1 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
g0045 0/0 1 1 0 0 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
g0046 0/0 1 0 0 1 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
g0047 0/0 1 0 0 1 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
g0048 0/0 1 0 0 1 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
g0049 0/0 1 0 0 1 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
g0050 0/0 1 0 0 1 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
g0051 0/0 1 0 1 0 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
g0052 0/0 1 0 0 1 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
g0053 0/0 1 0 0 0 1 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
g0054 0/0 1 0 0 1 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
g0055 0/0 1 0 1 0 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
g0056 0/0 1 0 1 0 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
g0057 0/1 1 0 0 0 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
g0058 0/0 1 0 0 0 0 1 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
g0059 0/0 1 1 0 0 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
g0060 0/0 1 1 0 0 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
g0061 0/0 1 0 0 1 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
g0062 0/0 1 0 0 1 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
g0063 0/0 1 0 0 1 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
g0064 0/0 1 0 1 0 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
g0065 0/0 1 0 0 1 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
g0066 0/0 1 0 1 0 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
g0067 0/0 1 0 0 1 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
g0068 0/0 1 0 0 1 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
g0069 0/0 1 0 0 1 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
g0070 0/0 1 0 0 1 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
g0071 0/0 1 0 0 1 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
g0072 0/0 1 0 0 1 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
g0073 0/0 1 0 0 0 1 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
g0074 0/0 1 0 0 1 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
g0075 0/0 1 0 0 1 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
g0076 0/0 1 0 0 1 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
g0077 0/0 1 0 1 0 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
g0078 0/0 1 0 0 1 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
g0079 0/0 1 0 0 1 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
g0080 0/0 1 0 1 0 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
g0081 0/0 1 0 0 1 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
g0082 0/0 1 0 1 0 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
g0083 0/0 1 1 0 0 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
g0084 0/0 1 0 1 0 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
g0085 0/0 1 0 1 0 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
g0086 0/0 1 0 0 0 0 1 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
g0087 0/0 1 0 0 0 0 1 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
g0088 0/0 1 0 0 1 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
g0089 0/0 1 0 0 1 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
g0090 0/0 1 0 0 1 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
g0091 0/0 1 0 0 0 0 1 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
g0092 0/0 1 0 0 0 0 1 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
g0093 0/0 1 0 0 0 1 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
g0094 0/0 1 0 0 1 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
g0095 0/0 1 0 0 1 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
g0096 0/0 1 0 0 0 0 1 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
g0097 0/0 1 0 0 0 0 1 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
g0098 0/0 1 0 1 0 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
g0099 0/0 1 0 0 1 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
g0100 0/0 1 0 0 1 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
g0101 0/0 1 0 0 1 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
g0102 0/0 1 0 0 0 0 1 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
g0103 0/0 1 0 0 0 0 1 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
g0104 0/0 1 0 0 1 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
g0105 0/0 1 0 1 0 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
g0106 0/0 1 0 0 1 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
g0107 0/0 1 0 0 1 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
g0108 0/0 1 0 0 1 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
g0109 0/0 1 0 0 0 0 1 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
g0110 0/0 1 0 0 1 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
g0111 0/0 1 0 1 0 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
g0112 0/0 1 0 1 0 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
g0113 0/0 1 0 1 0 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
g0114 0/0 1 0 0 0 1 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
g0115 0/0 1 0 0 1 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
g0116 0/0 1 0 0 0 0 1 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
g0117 0/0 1 0 0 1 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
g0118 0/0 1 0 0 1 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
g0119 0/0 1 0 0 1 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
g0120 0/0 1 0 0 1 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
g0121 0/0 1 0 0 1 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
g0122 0/0 1 0 0 1 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
g0123 0/0 1 0 1 0 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
g0124 0/0 1 0 0 1 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
g0125 0/0 1 0 0 1 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
g0126 0/0 1 0 0 1 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
g0127 0/0 1 0 0 1 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
g0128 0/0 1 0 0 1 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
g0129 0/0 1 0 0 1 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
g0130 0/0 1 0 0 1 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
g0131 0/0 1 0 0 1 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
g0132 0/0 1 0 0 0 1 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
g0133 0/0 1 0 0 1 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
g0134 0/0 1 0 0 1 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
g0135 0/0 1 0 0 1 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
g0136 0/0 1 0 0 1 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
g0137 0/0 1 0 0 0 0 1 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
g0138 0/0 1 1 0 0 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
g0139 1/0 1 0 0 0 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
g0140 0/0 1 1 0 0 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
g0141 0/0 1 0 1 0 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
g0142 0/0 1 1 0 0 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
g0143 0/0 1 0 0 1 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
g0144 0/0 1 0 0 1 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
g0145 0/0 1 0 0 1 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
g0146 0/0 1 0 1 0 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
g0147 0/0 1 1 0 0 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
g0148 0/0 1 1 0 0 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
g0149 0/0 1 1 0 0 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
g0150 0/0 1 1 0 0 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
g0151 0/0 1 0 1 0 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
g0152 0/0 1 1 0 0 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
g0153 0/0 1 1 0 0 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
g0154 0/0 1 1 0 0 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
g0155 0/0 1 1 0 0 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
g0156 0/0 1 1 0 0 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
g0157 0/0 1 1 0 0 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
g0158 0/0 1 1 0 0 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
g0159 0/0 1 1 0 0 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
g0160 0/0 1 1 0 0 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
g0161 0/0 1 1 0 0 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
g0162 0/0 1 1 0 0 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
g0163 0/0 1 0 0 1 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689

achapid grch38/
chm13v2 		alen clen total AFR AMR EAS EUR SAS regionname genename cseq chr start end
a0001c0001 1/1 3105 148 36 26 61 5 18 CNKSR2_chrX_21369418_21659689 CNKSR2 copy fasta chrX 21369418 21659689
a0001c0002 0/0 3105 8 0 2 6 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 copy fasta chrX 21369418 21659689
a0001c0003 0/0 3105 3 3 0 0 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 copy fasta chrX 21369418 21659689
a0001c0006 0/0 3105 1 1 0 0 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 copy fasta chrX 21369418 21659689
a0001c0007 0/0 3105 1 0 1 0 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 copy fasta chrX 21369418 21659689
a0002c0005 0/0 3105 1 1 0 0 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 copy fasta chrX 21369418 21659689
a0003c0004 0/0 3105 1 1 0 0 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 copy fasta chrX 21369418 21659689

acthapid grch38
chm13v2 		tlen total AFR AMR EAS EUR SAS regionname genename tseq chr start end
a0001c0001t0001 0/0 5754 43 3 6 22 3 9 CNKSR2_chrX_21369418_21659689 CNKSR2 copy fasta chrX 21369418 21659689
a0001c0001t0002 0/0 5751 22 2 5 14 1 0 CNKSR2_chrX_21369418_21659689 CNKSR2 copy fasta chrX 21369418 21659689
a0001c0001t0003 0/0 5754 12 4 1 5 0 2 CNKSR2_chrX_21369418_21659689 CNKSR2 copy fasta chrX 21369418 21659689
a0001c0001t0004 0/1 5757 9 0 5 2 1 0 CNKSR2_chrX_21369418_21659689 CNKSR2 copy fasta chrX 21369418 21659689
a0001c0001t0005 1/0 5753 6 0 0 5 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 copy fasta chrX 21369418 21659689
a0001c0001t0006 0/0 5756 5 5 0 0 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 copy fasta chrX 21369418 21659689
a0001c0001t0007 0/0 5755 3 1 0 2 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 copy fasta chrX 21369418 21659689
a0001c0001t0008 0/0 5752 4 0 1 3 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 copy fasta chrX 21369418 21659689
a0001c0001t0009 0/0 5750 4 4 0 0 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 copy fasta chrX 21369418 21659689
a0001c0001t0010 0/0 5756 3 3 0 0 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 copy fasta chrX 21369418 21659689
a0001c0001t0011 0/0 5753 3 3 0 0 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 copy fasta chrX 21369418 21659689
a0001c0001t0012 0/0 5750 3 3 0 0 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 copy fasta chrX 21369418 21659689
a0001c0001t0013 0/0 5757 2 0 1 1 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 copy fasta chrX 21369418 21659689
a0001c0001t0015 0/0 5758 2 0 1 0 0 1 CNKSR2_chrX_21369418_21659689 CNKSR2 copy fasta chrX 21369418 21659689
a0001c0001t0016 0/0 5756 2 0 1 0 0 1 CNKSR2_chrX_21369418_21659689 CNKSR2 copy fasta chrX 21369418 21659689
a0001c0001t0017 0/0 5753 2 0 2 0 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 copy fasta chrX 21369418 21659689
a0001c0001t0018 0/0 5766 1 0 1 0 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 copy fasta chrX 21369418 21659689
a0001c0001t0019 0/0 5768 1 1 0 0 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 copy fasta chrX 21369418 21659689
a0001c0001t0020 0/0 5760 1 0 1 0 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 copy fasta chrX 21369418 21659689
a0001c0001t0021 0/0 5760 1 0 0 1 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 copy fasta chrX 21369418 21659689
a0001c0001t0022 0/0 5760 1 1 0 0 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 copy fasta chrX 21369418 21659689
a0001c0001t0023 0/0 5766 1 0 0 0 0 1 CNKSR2_chrX_21369418_21659689 CNKSR2 copy fasta chrX 21369418 21659689
a0001c0001t0024 0/0 5759 1 1 0 0 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 copy fasta chrX 21369418 21659689
a0001c0001t0025 0/0 5756 1 0 0 1 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 copy fasta chrX 21369418 21659689
a0001c0001t0027 0/0 5756 1 1 0 0 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 copy fasta chrX 21369418 21659689
a0001c0001t0029 0/0 5755 1 0 1 0 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 copy fasta chrX 21369418 21659689
a0001c0001t0030 0/0 5747 1 0 0 0 0 1 CNKSR2_chrX_21369418_21659689 CNKSR2 copy fasta chrX 21369418 21659689
a0001c0001t0031 0/0 5756 1 0 0 1 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 copy fasta chrX 21369418 21659689
a0001c0001t0032 0/0 5756 1 0 0 1 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 copy fasta chrX 21369418 21659689
a0001c0001t0033 0/0 5754 1 0 0 1 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 copy fasta chrX 21369418 21659689
a0001c0001t0034 0/0 5755 1 0 0 0 0 1 CNKSR2_chrX_21369418_21659689 CNKSR2 copy fasta chrX 21369418 21659689
a0001c0001t0035 0/0 5755 1 0 0 1 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 copy fasta chrX 21369418 21659689
a0001c0001t0037 0/0 5755 1 0 0 0 0 1 CNKSR2_chrX_21369418_21659689 CNKSR2 copy fasta chrX 21369418 21659689
a0001c0001t0038 0/0 5750 1 1 0 0 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 copy fasta chrX 21369418 21659689
a0001c0001t0039 0/0 5750 1 0 0 1 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 copy fasta chrX 21369418 21659689
a0001c0001t0040 0/0 5751 1 1 0 0 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 copy fasta chrX 21369418 21659689
a0001c0001t0041 0/0 5750 1 1 0 0 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 copy fasta chrX 21369418 21659689
a0001c0001t0042 0/0 5738 1 1 0 0 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 copy fasta chrX 21369418 21659689
a0001c0001t0043 0/0 5732 1 0 0 0 0 1 CNKSR2_chrX_21369418_21659689 CNKSR2 copy fasta chrX 21369418 21659689
a0001c0002t0001 0/0 5754 5 0 2 3 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 copy fasta chrX 21369418 21659689
a0001c0002t0005 0/0 5753 1 0 0 1 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 copy fasta chrX 21369418 21659689
a0001c0002t0007 0/0 5755 2 0 0 2 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 copy fasta chrX 21369418 21659689
a0001c0003t0014 0/0 5777 2 2 0 0 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 copy fasta chrX 21369418 21659689
a0001c0003t0026 0/0 5775 1 1 0 0 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 copy fasta chrX 21369418 21659689
a0001c0006t0028 0/0 5757 1 1 0 0 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 copy fasta chrX 21369418 21659689
a0001c0007t0036 0/0 5753 1 0 1 0 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 copy fasta chrX 21369418 21659689
a0002c0005t0003 0/0 5754 1 1 0 0 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 copy fasta chrX 21369418 21659689
a0003c0004t0006 0/0 5756 1 1 0 0 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 copy fasta chrX 21369418 21659689

actghapid grch38/
chm13v2 		total AFR AMR EAS EUR SAS regionname genename chr start end
a0001c0001t0001g0001 0/0 1 0 0 1 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
a0001c0001t0001g0035 0/0 1 0 0 1 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
a0001c0001t0001g0036 0/0 1 0 0 0 0 1 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
a0001c0001t0001g0037 0/0 1 0 0 1 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
a0001c0001t0001g0039 0/0 1 0 1 0 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
a0001c0001t0001g0048 0/0 1 0 0 1 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
a0001c0001t0001g0051 0/0 1 0 1 0 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
a0001c0001t0001g0052 0/0 1 0 0 1 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
a0001c0001t0001g0053 0/0 1 0 0 0 1 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
a0001c0001t0001g0058 0/0 1 0 0 0 0 1 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
a0001c0001t0001g0060 0/0 1 1 0 0 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
a0001c0001t0001g0062 0/0 1 0 0 1 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
a0001c0001t0001g0067 0/0 1 0 0 1 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
a0001c0001t0001g0068 0/0 1 0 0 1 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
a0001c0001t0001g0069 0/0 1 0 0 1 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
a0001c0001t0001g0071 0/0 1 0 0 1 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
a0001c0001t0001g0073 0/0 1 0 0 0 1 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
a0001c0001t0001g0074 0/0 1 0 0 1 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
a0001c0001t0001g0075 0/0 1 0 0 1 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
a0001c0001t0001g0076 0/0 1 0 0 1 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
a0001c0001t0001g0077 0/0 1 0 1 0 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
a0001c0001t0001g0078 0/0 1 0 0 1 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
a0001c0001t0001g0080 0/0 1 0 1 0 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
a0001c0001t0001g0081 0/0 1 0 0 1 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
a0001c0001t0001g0082 0/0 1 0 1 0 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
a0001c0001t0001g0083 0/0 1 1 0 0 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
a0001c0001t0001g0084 0/0 1 0 1 0 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
a0001c0001t0001g0087 0/0 1 0 0 0 0 1 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
a0001c0001t0001g0089 0/0 1 0 0 1 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
a0001c0001t0001g0090 0/0 1 0 0 1 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
a0001c0001t0001g0093 0/0 1 0 0 0 1 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
a0001c0001t0001g0094 0/0 1 0 0 1 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
a0001c0001t0001g0096 0/0 1 0 0 0 0 1 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
a0001c0001t0001g0097 0/0 1 0 0 0 0 1 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
a0001c0001t0001g0102 0/0 1 0 0 0 0 1 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
a0001c0001t0001g0103 0/0 1 0 0 0 0 1 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
a0001c0001t0001g0109 0/0 1 0 0 0 0 1 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
a0001c0001t0001g0128 0/0 1 0 0 1 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
a0001c0001t0001g0131 0/0 1 0 0 1 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
a0001c0001t0001g0134 0/0 1 0 0 1 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
a0001c0001t0001g0137 0/0 1 0 0 0 0 1 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
a0001c0001t0001g0145 0/0 1 0 0 1 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
a0001c0001t0001g0158 0/0 1 1 0 0 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
a0001c0001t0002g0003 0/0 1 0 0 1 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
a0001c0001t0002g0004 0/0 1 0 1 0 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
a0001c0001t0002g0019 0/0 1 0 1 0 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
a0001c0001t0002g0028 0/0 1 1 0 0 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
a0001c0001t0002g0043 0/0 1 1 0 0 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
a0001c0001t0002g0046 0/0 1 0 0 1 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
a0001c0001t0002g0047 0/0 1 0 0 1 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
a0001c0001t0002g0049 0/0 1 0 0 1 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
a0001c0001t0002g0050 0/0 1 0 0 1 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
a0001c0001t0002g0110 0/0 1 0 0 1 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
a0001c0001t0002g0111 0/0 1 0 1 0 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
a0001c0001t0002g0112 0/0 1 0 1 0 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
a0001c0001t0002g0113 0/0 1 0 1 0 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
a0001c0001t0002g0114 0/0 1 0 0 0 1 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
a0001c0001t0002g0115 0/0 1 0 0 1 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
a0001c0001t0002g0118 0/0 1 0 0 1 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
a0001c0001t0002g0119 0/0 1 0 0 1 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
a0001c0001t0002g0120 0/0 1 0 0 1 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
a0001c0001t0002g0121 0/0 1 0 0 1 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
a0001c0001t0002g0122 0/0 1 0 0 1 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
a0001c0001t0002g0125 0/0 1 0 0 1 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
a0001c0001t0002g0126 0/0 1 0 0 1 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
a0001c0001t0003g0015 0/0 1 1 0 0 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
a0001c0001t0003g0024 0/0 1 1 0 0 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
a0001c0001t0003g0029 0/0 1 1 0 0 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
a0001c0001t0003g0031 0/0 1 1 0 0 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
a0001c0001t0003g0044 0/0 1 0 0 0 0 1 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
a0001c0001t0003g0061 0/0 1 0 0 1 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
a0001c0001t0003g0070 0/0 1 0 0 1 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
a0001c0001t0003g0101 0/0 1 0 0 1 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
a0001c0001t0003g0116 0/0 1 0 0 0 0 1 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
a0001c0001t0003g0133 0/0 1 0 0 1 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
a0001c0001t0003g0136 0/0 1 0 0 1 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
a0001c0001t0003g0151 0/0 1 0 1 0 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
a0001c0001t0004g0020 0/0 1 0 1 0 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
a0001c0001t0004g0021 0/0 1 0 1 0 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
a0001c0001t0004g0055 0/0 1 0 1 0 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
a0001c0001t0004g0056 0/0 1 0 1 0 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
a0001c0001t0004g0057 0/1 1 0 0 0 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
a0001c0001t0004g0064 0/0 1 0 1 0 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
a0001c0001t0004g0117 0/0 1 0 0 1 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
a0001c0001t0004g0129 0/0 1 0 0 1 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
a0001c0001t0004g0132 0/0 1 0 0 0 1 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
a0001c0001t0005g0063 0/0 1 0 0 1 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
a0001c0001t0005g0072 0/0 1 0 0 1 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
a0001c0001t0005g0079 0/0 1 0 0 1 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
a0001c0001t0005g0095 0/0 1 0 0 1 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
a0001c0001t0005g0099 0/0 1 0 0 1 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
a0001c0001t0005g0139 1/0 1 0 0 0 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
a0001c0001t0006g0155 0/0 1 1 0 0 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
a0001c0001t0006g0157 0/0 1 1 0 0 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
a0001c0001t0006g0159 0/0 1 1 0 0 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
a0001c0001t0006g0160 0/0 1 1 0 0 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
a0001c0001t0006g0161 0/0 1 1 0 0 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
a0001c0001t0007g0022 0/0 1 0 0 1 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
a0001c0001t0007g0127 0/0 1 0 0 1 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
a0001c0001t0007g0140 0/0 1 1 0 0 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
a0001c0001t0008g0005 0/0 1 0 1 0 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
a0001c0001t0008g0124 0/0 1 0 0 1 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
a0001c0001t0008g0135 0/0 1 0 0 1 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
a0001c0001t0008g0143 0/0 1 0 0 1 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
a0001c0001t0009g0010 0/0 1 1 0 0 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
a0001c0001t0009g0011 0/0 1 1 0 0 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
a0001c0001t0009g0012 0/0 1 1 0 0 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
a0001c0001t0009g0013 0/0 1 1 0 0 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
a0001c0001t0010g0152 0/0 1 1 0 0 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
a0001c0001t0010g0153 0/0 1 1 0 0 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
a0001c0001t0010g0162 0/0 1 1 0 0 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
a0001c0001t0011g0016 0/0 1 1 0 0 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
a0001c0001t0011g0017 0/0 1 1 0 0 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
a0001c0001t0011g0138 0/0 1 1 0 0 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
a0001c0001t0012g0025 0/0 1 1 0 0 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
a0001c0001t0012g0045 0/0 1 1 0 0 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
a0001c0001t0012g0142 0/0 1 1 0 0 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
a0001c0001t0013g0066 0/0 1 0 1 0 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
a0001c0001t0013g0100 0/0 1 0 0 1 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
a0001c0001t0015g0038 0/0 1 0 0 0 0 1 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
a0001c0001t0015g0098 0/0 1 0 1 0 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
a0001c0001t0016g0032 0/0 1 0 0 0 0 1 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
a0001c0001t0016g0085 0/0 1 0 1 0 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
a0001c0001t0017g0018 0/0 1 0 1 0 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
a0001c0001t0017g0146 0/0 1 0 1 0 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
a0001c0001t0018g0123 0/0 1 0 1 0 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
a0001c0001t0019g0014 0/0 1 1 0 0 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
a0001c0001t0020g0141 0/0 1 0 1 0 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
a0001c0001t0021g0088 0/0 1 0 0 1 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
a0001c0001t0022g0033 0/0 1 1 0 0 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
a0001c0001t0023g0006 0/0 1 0 0 0 0 1 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
a0001c0001t0024g0156 0/0 1 1 0 0 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
a0001c0001t0025g0130 0/0 1 0 0 1 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
a0001c0001t0027g0034 0/0 1 1 0 0 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
a0001c0001t0029g0023 0/0 1 0 1 0 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
a0001c0001t0030g0086 0/0 1 0 0 0 0 1 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
a0001c0001t0031g0065 0/0 1 0 0 1 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
a0001c0001t0032g0163 0/0 1 0 0 1 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
a0001c0001t0033g0002 0/0 1 0 0 1 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
a0001c0001t0034g0091 0/0 1 0 0 0 0 1 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
a0001c0001t0035g0054 0/0 1 0 0 1 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
a0001c0001t0037g0092 0/0 1 0 0 0 0 1 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
a0001c0001t0038g0150 0/0 1 1 0 0 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
a0001c0001t0039g0144 0/0 1 0 0 1 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
a0001c0001t0040g0027 0/0 1 1 0 0 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
a0001c0001t0041g0009 0/0 1 1 0 0 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
a0001c0001t0042g0008 0/0 1 1 0 0 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
a0001c0001t0043g0007 0/0 1 0 0 0 0 1 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
a0001c0002t0001g0042 0/0 1 0 1 0 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
a0001c0002t0001g0104 0/0 1 0 0 1 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
a0001c0002t0001g0105 0/0 1 0 1 0 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
a0001c0002t0001g0107 0/0 1 0 0 1 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
a0001c0002t0001g0108 0/0 1 0 0 1 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
a0001c0002t0005g0106 0/0 1 0 0 1 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
a0001c0002t0007g0040 0/0 1 0 0 1 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
a0001c0002t0007g0041 0/0 1 0 0 1 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
a0001c0003t0014g0147 0/0 1 1 0 0 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
a0001c0003t0014g0149 0/0 1 1 0 0 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
a0001c0003t0026g0148 0/0 1 1 0 0 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
a0001c0006t0028g0059 0/0 1 1 0 0 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
a0001c0007t0036g0026 0/0 1 0 1 0 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
a0002c0005t0003g0030 0/0 1 1 0 0 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
a0003c0004t0006g0154 0/0 1 1 0 0 0 0 CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689

sampleid ID
haplotypeid
 ahapid chapid thapid ghapid gpopname popname regionname genename chr start end
HG00140 hp1 a0001 c0001 t0002 g0114 EUR GBR CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
HG00280 hp1 a0001 c0001 t0001 g0053 EUR FIN CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
HG00609 hp1 a0001 c0001 t0004 g0129 EAS CHS CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
HG00621 hp1 a0001 c0001 t0002 g0003 EAS CHS CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
HG00642 hp1 a0001 c0001 t0001 g0039 AMR PUR CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
HG00673 hp1 a0001 c0001 t0001 g0048 EAS CHS CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
HG00735 hp1 a0001 c0001 t0002 g0113 AMR PUR CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
HG00735 hp2 a0001 c0001 t0001 g0077 AMR PUR CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
HG00738 hp1 a0001 c0001 t0004 g0064 AMR PUR CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
HG00741 hp1 a0001 c0001 t0004 g0056 AMR PUR CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
HG00741 hp2 a0001 c0001 t0002 g0111 AMR PUR CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
HG01069 hp1 a0001 c0001 t0008 g0005 AMR PUR CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
HG01071 hp1 a0001 c0001 t0002 g0004 AMR PUR CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
HG01071 hp2 a0001 c0001 t0017 g0018 AMR PUR CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
HG01074 hp1 a0001 c0001 t0001 g0051 AMR PUR CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
HG01081 hp1 a0001 c0007 t0036 g0026 AMR PUR CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
HG01081 hp2 a0001 c0001 t0003 g0151 AMR PUR CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
HG01099 hp1 a0001 c0001 t0029 g0023 AMR PUR CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
HG01106 hp1 a0001 c0001 t0002 g0019 AMR PUR CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
HG01109 hp1 a0001 c0001 t0017 g0146 AMR PUR CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
HG01167 hp1 a0001 c0001 t0013 g0066 AMR PUR CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
HG01192 hp1 a0001 c0001 t0004 g0020 AMR PUR CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
HG01243 hp1 a0001 c0001 t0020 g0141 AMR PUR CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
HG01255 hp1 a0001 c0001 t0001 g0080 AMR CLM CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
HG01256 hp1 a0001 c0001 t0004 g0021 AMR CLM CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
HG01258 hp1 a0001 c0001 t0004 g0055 AMR CLM CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
HG01261 hp1 a0001 c0001 t0001 g0084 AMR CLM CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
HG01358 hp1 a0001 c0001 t0018 g0123 AMR CLM CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
HG01433 hp1 a0001 c0001 t0002 g0112 AMR CLM CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
HG01515 hp1 a0001 c0001 t0001 g0073 EUR IBS CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
HG01884 hp1 a0003 c0004 t0006 g0154 AFR ACB CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
HG01884 hp2 a0001 c0001 t0019 g0014 AFR ACB CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
HG01928 hp1 a0001 c0001 t0001 g0082 AMR PEL CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
HG01934 hp1 a0001 c0002 t0001 g0042 AMR PEL CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
HG01943 hp1 a0001 c0002 t0001 g0105 AMR PEL CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
HG01952 hp1 a0001 c0001 t0015 g0098 AMR PEL CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
HG02015 hp1 a0001 c0001 t0004 g0117 EAS KHV CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
HG02027 hp1 a0001 c0002 t0007 g0040 EAS KHV CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
HG02040 hp1 a0001 c0001 t0031 g0065 EAS KHV CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
HG02055 hp1 a0001 c0001 t0022 g0033 AFR ACB CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
HG02056 hp1 a0001 c0001 t0001 g0035 EAS KHV CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
HG02071 hp1 a0001 c0001 t0001 g0134 EAS KHV CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
HG02074 hp1 a0001 c0001 t0002 g0110 EAS KHV CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
HG02083 hp1 a0001 c0001 t0002 g0046 EAS KHV CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
HG02129 hp1 a0001 c0002 t0001 g0104 EAS KHV CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
HG02132 hp1 a0001 c0001 t0007 g0022 EAS KHV CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
HG02135 hp1 a0001 c0001 t0001 g0037 EAS KHV CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
HG02145 hp1 a0001 c0001 t0012 g0045 AFR ACB CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
HG02258 hp1 a0001 c0001 t0002 g0028 AFR ACB CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
HG02280 hp1 a0001 c0001 t0003 g0024 AFR ACB CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
HG02280 hp2 a0001 c0001 t0009 g0010 AFR ACB CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
HG02300 hp1 a0001 c0001 t0016 g0085 AMR PEL CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
HG02572 hp1 a0001 c0001 t0009 g0012 AFR GWD CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
HG02602 hp1 a0001 c0001 t0016 g0032 SAS PJL CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
HG02615 hp1 a0001 c0003 t0014 g0147 AFR GWD CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
HG02615 hp2 a0001 c0001 t0006 g0160 AFR GWD CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
HG02647 hp1 a0001 c0001 t0042 g0008 AFR GWD CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
HG02698 hp1 a0001 c0001 t0001 g0058 SAS PJL CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
HG02717 hp1 a0001 c0001 t0003 g0015 AFR GWD CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
HG02735 hp1 a0001 c0001 t0034 g0091 SAS PJL CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
HG02738 hp1 a0001 c0001 t0001 g0109 SAS PJL CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
HG02809 hp1 a0001 c0001 t0009 g0011 AFR GWD CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
HG02809 hp2 a0001 c0001 t0002 g0043 AFR GWD CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
HG02886 hp1 a0001 c0001 t0006 g0159 AFR GWD CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
HG02886 hp2 a0002 c0005 t0003 g0030 AFR GWD CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
HG02895 hp1 a0001 c0001 t0003 g0029 AFR GWD CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
HG02922 hp1 a0001 c0001 t0007 g0140 AFR ESN CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
HG02922 hp2 a0001 c0001 t0006 g0155 AFR ESN CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
HG02965 hp1 a0001 c0003 t0026 g0148 AFR ESN CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
HG02976 hp1 a0001 c0001 t0006 g0161 AFR ESN CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
HG02976 hp2 a0001 c0001 t0003 g0031 AFR ESN CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
HG03017 hp1 a0001 c0001 t0003 g0116 SAS PJL CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
HG03041 hp1 a0001 c0001 t0011 g0138 AFR GWD CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
HG03041 hp2 a0001 c0001 t0001 g0060 AFR GWD CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
HG03098 hp1 a0001 c0001 t0041 g0009 AFR MSL CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
HG03130 hp1 a0001 c0001 t0006 g0157 AFR ESN CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
HG03139 hp1 a0001 c0001 t0012 g0142 AFR ESN CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
HG03209 hp1 a0001 c0001 t0010 g0162 AFR MSL CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
HG03225 hp1 a0001 c0001 t0010 g0152 AFR MSL CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
HG03486 hp1 a0001 c0001 t0009 g0013 AFR MSL CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
HG03486 hp2 a0001 c0001 t0012 g0025 AFR MSL CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
HG03490 hp1 a0001 c0001 t0001 g0137 SAS PJL CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
HG03491 hp1 a0001 c0001 t0001 g0103 SAS PJL CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
HG03491 hp2 a0001 c0001 t0043 g0007 SAS PJL CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
HG03492 hp1 a0001 c0001 t0001 g0102 SAS PJL CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
HG03516 hp1 a0001 c0001 t0001 g0158 AFR ESN CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
HG03516 hp2 a0001 c0006 t0028 g0059 AFR ESN CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
HG03579 hp1 a0001 c0001 t0011 g0017 AFR MSL CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
HG03654 hp1 a0001 c0001 t0023 g0006 SAS PJL CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
HG03688 hp1 a0001 c0001 t0015 g0038 SAS STU CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
HG03710 hp1 a0001 c0001 t0001 g0096 SAS PJL CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
HG03942 hp1 a0001 c0001 t0003 g0044 SAS BEB CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
HG04115 hp1 a0001 c0001 t0001 g0036 SAS STU CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
HG04199 hp1 a0001 c0001 t0030 g0086 SAS STU CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
HG04204 hp1 a0001 c0001 t0037 g0092 SAS STU CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
HG04228 hp1 a0001 c0001 t0001 g0097 SAS STU CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
NA18522 hp1 a0001 c0001 t0011 g0016 AFR YRI CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
NA18612 hp1 a0001 c0001 t0002 g0121 EAS CHB CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
NA18747 hp1 a0001 c0001 t0005 g0099 EAS CHB CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
NA18943 hp1 a0001 c0001 t0002 g0126 EAS JPT CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
NA18944 hp1 a0001 c0001 t0002 g0050 EAS JPT CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
NA18945 hp1 a0001 c0001 t0001 g0071 EAS JPT CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
NA18948 hp1 a0001 c0001 t0001 g0075 EAS JPT CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
NA18952 hp1 a0001 c0001 t0001 g0067 EAS JPT CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
NA18953 hp1 a0001 c0001 t0003 g0133 EAS JPT CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
NA18959 hp1 a0001 c0001 t0001 g0131 EAS JPT CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
NA18960 hp1 a0001 c0001 t0005 g0095 EAS JPT CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
NA18961 hp1 a0001 c0001 t0005 g0079 EAS JPT CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
NA18962 hp1 a0001 c0001 t0005 g0063 EAS JPT CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
NA18965 hp1 a0001 c0001 t0003 g0136 EAS JPT CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
NA18966 hp1 a0001 c0001 t0002 g0119 EAS JPT CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
NA18967 hp1 a0001 c0001 t0035 g0054 EAS JPT CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
NA18970 hp1 a0001 c0001 t0003 g0061 EAS JPT CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
NA18971 hp1 a0001 c0001 t0001 g0094 EAS JPT CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
NA18974 hp1 a0001 c0001 t0002 g0115 EAS JPT CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
NA18977 hp1 a0001 c0002 t0007 g0041 EAS JPT CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
NA18982 hp1 a0001 c0001 t0001 g0076 EAS JPT CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
NA18983 hp1 a0001 c0001 t0001 g0074 EAS JPT CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
NA18984 hp1 a0001 c0002 t0001 g0107 EAS JPT CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
NA18986 hp1 a0001 c0001 t0008 g0143 EAS JPT CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
NA18988 hp1 a0001 c0001 t0001 g0062 EAS JPT CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
NA18989 hp1 a0001 c0001 t0001 g0068 EAS JPT CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
NA18990 hp1 a0001 c0001 t0002 g0120 EAS JPT CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
NA18994 hp1 a0001 c0001 t0003 g0070 EAS JPT CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
NA18995 hp1 a0001 c0001 t0003 g0101 EAS JPT CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
NA19000 hp1 a0001 c0001 t0008 g0135 EAS JPT CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
NA19004 hp1 a0001 c0001 t0002 g0049 EAS JPT CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
NA19005 hp1 a0001 c0001 t0001 g0090 EAS JPT CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
NA19006 hp1 a0001 c0001 t0033 g0002 EAS JPT CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
NA19007 hp1 a0001 c0001 t0001 g0052 EAS JPT CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
NA19009 hp1 a0001 c0001 t0001 g0078 EAS JPT CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
NA19012 hp1 a0001 c0001 t0008 g0124 EAS JPT CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
NA19043 hp1 a0001 c0001 t0040 g0027 AFR LWK CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
NA19055 hp1 a0001 c0001 t0039 g0144 EAS JPT CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
NA19056 hp1 a0001 c0002 t0001 g0108 EAS JPT CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
NA19058 hp1 a0001 c0001 t0005 g0072 EAS JPT CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
NA19060 hp1 a0001 c0001 t0021 g0088 EAS JPT CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
NA19062 hp1 a0001 c0001 t0025 g0130 EAS JPT CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
NA19063 hp1 a0001 c0001 t0032 g0163 EAS JPT CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
NA19066 hp1 a0001 c0001 t0001 g0128 EAS JPT CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
NA19068 hp1 a0001 c0001 t0001 g0001 EAS JPT CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
NA19070 hp1 a0001 c0001 t0002 g0122 EAS JPT CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
NA19072 hp1 a0001 c0001 t0007 g0127 EAS JPT CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
NA19076 hp1 a0001 c0001 t0002 g0047 EAS JPT CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
NA19079 hp1 a0001 c0002 t0005 g0106 EAS JPT CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
NA19082 hp1 a0001 c0001 t0001 g0145 EAS JPT CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
NA19085 hp1 a0001 c0001 t0001 g0069 EAS JPT CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
NA19086 hp1 a0001 c0001 t0002 g0118 EAS JPT CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
NA19088 hp1 a0001 c0001 t0001 g0089 EAS JPT CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
NA19089 hp1 a0001 c0001 t0001 g0081 EAS JPT CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
NA19091 hp1 a0001 c0001 t0002 g0125 EAS JPT CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
NA19240 hp1 a0001 c0001 t0038 g0150 AFR YRI CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
NA19240 hp2 a0001 c0001 t0010 g0153 AFR YRI CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
NA20752 hp1 a0001 c0001 t0004 g0132 EUR TSI CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
NA20805 hp1 a0001 c0001 t0001 g0093 EUR TSI CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
NA20905 hp1 a0001 c0001 t0001 g0087 SAS GIH CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
HG02486 hp1 a0001 c0001 t0027 g0034 AFR ACB CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
HG03471 hp1 a0001 c0003 t0014 g0149 AFR MSL CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
NA18955 hp1 a0001 c0001 t0013 g0100 EAS JPT CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
NA20300 hp1 a0001 c0001 t0001 g0083 AFR USA CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
NA20300 hp2 a0001 c0001 t0024 g0156 AFR USA CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
homoSapiens_chm13v2 hp1 a0001 c0001 t0004 g0057 REF REF CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689
homoSapiens_grch38 hp1 a0001 c0001 t0005 g0139 REF REF CNKSR2_chrX_21369418_21659689 CNKSR2 chrX 21369418 21659689

chr:pos ref alt #
# of ahapid:amino-acid(protein) level
 ahapids #
# of haplotypeids
 haplotypeids annotation impact hgvs_c hgvs_p genename geneid featuretype featureid transcript_biotype rank cdna
cdna pos length
 cds
cds pos length
 aa
aa pos length
 distance status chr pos
chrX:21609542 C
C
 A
A
 1 a0003
a0003
 1 HG01884.hp1
HG01884.hp1
 missense_variant MODERATE c.2617C>A
c.2617C>A
 p.Pro873Thr
p.Pro873Thr
 CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 20/22 3097/5753 2617/3105 873/1034 chrX 21609542
chrX:21652399 G
G
 A
A
 1 a0002
a0002
 1 HG02886.hp2
HG02886.hp2
 missense_variant MODERATE c.2983G>A
c.2983G>A
 p.Asp995Asn
p.Asp995Asn
 CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 22/22 3463/5753 2983/3105 995/1034 chrX 21652399

chr:pos ref alt #
# of chapid
 chapids #
# of haplotypeids
 haplotypeids annotation impact hgvs_c hgvs_p genename geneid featuretype featureid transcript_biotype rank cdna
cdna pos length
 cds
cds pos length
 aa
aa pos length
 distance status chr pos
chrX:21470771 T
T
 C
C
 1 a0001c0003
a0001c0003
 3 HG02615.hp1
HG02965.hp1
HG03471.hp1
HG02615.hp1
HG02965.hp1
HG03471.hp1
 synonymous_variant LOW c.525T>C
c.525T>C
 p.Cys175Cys
p.Cys175Cys
 CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 5/22 1005/5753 525/3105 175/1034 chrX 21470771
chrX:21490548 A
A
 G
G
 1 a0001c0002
a0001c0002
 8 HG01934.hp1
HG01943.hp1
HG02027.hp1
others(5): Show 
HG01934.hp1
HG01943.hp1
HG02027.hp1
HG02129.hp1
NA18977.hp1
NA18984.hp1
NA19056.hp1
NA19079.hp1
 synonymous_variant LOW c.651A>G
c.651A>G
 p.Gln217Gln
p.Gln217Gln
 CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 6/22 1131/5753 651/3105 217/1034 chrX 21490548
chrX:21652342 C
C
 T
T
 1 a0001c0007
a0001c0007
 1 HG01081.hp1
HG01081.hp1
 synonymous_variant LOW c.2926C>T
c.2926C>T
 p.Leu976Leu
p.Leu976Leu
 CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 22/22 3406/5753 2926/3105 976/1034 chrX 21652342
chrX:21652512 G
G
 A
A
 1 a0001c0006
a0001c0006
 1 HG03516.hp2
HG03516.hp2
 synonymous_variant LOW c.3096G>A
c.3096G>A
 p.Thr1032Thr
p.Thr1032Thr
 CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 22/22 3576/5753 3096/3105 1032/1034 chrX 21652512

chr:pos ref alt #
# of thapid:transcript level
 thapids #
# of haplotypeids
 haplotypeids annotation impact hgvs_c hgvs_p genename geneid featuretype featureid transcript_biotype rank cdna
cdna pos length
 cds
cds pos length
 aa
aa pos length
 distance status chr pos
chrX:21374594 G
G
 GGCA
GGCA
 3 a0001c0001t0013
a0001c0001t0024
a0001c0001t0025
a0001c0001t0013
a0001c0001t0024
a0001c0001t0025
 4 HG01167.hp1
NA18955.hp1
NA19062.hp1
others(1): Show 
HG01167.hp1
NA18955.hp1
NA19062.hp1
NA20300.hp2
 5_prime_UTR_variant MODIFIER c.-268_-266dupAGC
c.-268_-266dupAGC
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 1/22 265 INFO_REALIGN_3_PRIME chrX 21374594
chrX:21374594 G
G
 GGCAGCA
GGCAGCA
 3 a0001c0001t0020
a0001c0001t0021
a0001c0001t0022
a0001c0001t0020
a0001c0001t0021
a0001c0001t0022
 3 HG01243.hp1
HG02055.hp1
NA19060.hp1
HG01243.hp1
HG02055.hp1
NA19060.hp1
 5_prime_UTR_variant MODIFIER c.-271_-266dupAGCAGC
c.-271_-266dupAGCAGC
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 1/22 265 INFO_REALIGN_3_PRIME chrX 21374594
chrX:21374594 G
G
 GGCAGCAG
others(5): Show 
GGCAGCAGCAGCA
 1 a0001c0001t0018
a0001c0001t0018
 1 HG01358.hp1
HG01358.hp1
 5_prime_UTR_variant MODIFIER c.-277_-266dupAGCAGC
others(6): Show 
c.-277_-266dupAGCAGCAGCAGC
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 1/22 265 INFO_REALIGN_3_PRIME chrX 21374594
chrX:21374594 GGCA
GGCA
 G
G
 9 a0001c0001t0002
a0001c0001t0008
a0001c0001t0009
others(6): Show 
a0001c0001t0002
a0001c0001t0008
a0001c0001t0009
a0001c0001t0012
a0001c0001t0017
a0001c0001t0038
a0001c0001t0039
a0001c0001t0040
a0001c0001t0041
 39 HG00140.hp1
HG00621.hp1
HG00735.hp1
others(36): Show 
HG00140.hp1
HG00621.hp1
HG00735.hp1
HG00741.hp2
HG01069.hp1
HG01071.hp1
HG01071.hp2
HG01106.hp1
HG01109.hp1
HG01433.hp1
HG02074.hp1
HG02083.hp1
HG02145.hp1
HG02258.hp1
HG02280.hp2
HG02572.hp1
HG02809.hp1
HG02809.hp2
HG03098.hp1
HG03139.hp1
HG03486.hp1
HG03486.hp2
NA18612.hp1
NA18943.hp1
NA18944.hp1
NA18966.hp1
NA18974.hp1
NA18986.hp1
NA18990.hp1
NA19000.hp1
NA19004.hp1
NA19012.hp1
NA19043.hp1
NA19055.hp1
NA19070.hp1
NA19076.hp1
NA19086.hp1
NA19091.hp1
NA19240.hp1
 5_prime_UTR_variant MODIFIER c.-268_-266delAGC
c.-268_-266delAGC
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 1/22 266 INFO_REALIGN_3_PRIME chrX 21374594
chrX:21374594 GGCAGCAG
others(8): Show 
GGCAGCAGCAGCAGCA
 G
G
 1 a0001c0001t0042
a0001c0001t0042
 1 HG02647.hp1
HG02647.hp1
 5_prime_UTR_variant MODIFIER c.-280_-266delAGCAGC
others(9): Show 
c.-280_-266delAGCAGCAGCAGCAGC
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 1/22 266 INFO_REALIGN_3_PRIME chrX 21374594
chrX:21374594 GGCAGCAG
others(14): Show 
GGCAGCAGCAGCAGCAGCAGCA
 G
G
 1 a0001c0001t0043
a0001c0001t0043
 1 HG03491.hp2
HG03491.hp2
 5_prime_UTR_variant MODIFIER c.-286_-266delAGCAGC
others(15): Show 
c.-286_-266delAGCAGCAGCAGCAGCAGCAGC
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 1/22 266 INFO_REALIGN_3_PRIME chrX 21374594
chrX:21374630 A
A
 AGCAGCAG
others(5): Show 
AGCAGCAGCAGCC
 1 a0001c0001t0019
a0001c0001t0019
 1 HG01884.hp2
HG01884.hp2
 5_prime_UTR_variant MODIFIER c.-266_-265insAGCAGC
others(6): Show 
c.-266_-265insAGCAGCAGCCGC
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 1/22 265 INFO_REALIGN_3_PRIME chrX 21374630
chrX:21374630 A
A
 AGCAGCCG
others(5): Show 
AGCAGCCGCCGCC
 1 a0001c0001t0023
a0001c0001t0023
 1 HG03654.hp1
HG03654.hp1
 5_prime_UTR_variant MODIFIER c.-266_-265insAGCCGC
others(6): Show 
c.-266_-265insAGCCGCCGCCGC
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 1/22 265 INFO_REALIGN_3_PRIME chrX 21374630
chrX:21374630 A
A
 AGCC
AGCC
 3 a0001c0001t0004
a0001c0001t0015
a0001c0001t0016
a0001c0001t0004
a0001c0001t0015
a0001c0001t0016
 13 HG00609.hp1
HG00738.hp1
HG00741.hp1
others(10): Show 
HG00609.hp1
HG00738.hp1
HG00741.hp1
HG01192.hp1
HG01256.hp1
HG01258.hp1
HG01952.hp1
HG02015.hp1
HG02300.hp1
HG02602.hp1
HG03688.hp1
NA20752.hp1
homoSapiens_chm13v2.hp1
 5_prime_UTR_variant MODIFIER c.-252_-250dupGCC
c.-252_-250dupGCC
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 1/22 249 INFO_REALIGN_3_PRIME chrX 21374630
chrX:21374630 A
A
 AGCCGCAG
others(14): Show 
AGCCGCAGCAGCCGCAGCAGCC
 2 a0001c0003t0014
a0001c0003t0026
a0001c0003t0014
a0001c0003t0026
 3 HG02615.hp1
HG02965.hp1
HG03471.hp1
HG02615.hp1
HG02965.hp1
HG03471.hp1
 5_prime_UTR_variant MODIFIER c.-263_-262insAGCAGC
others(15): Show 
c.-263_-262insAGCAGCCGCAGCAGCCGCCGC
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 1/22 262 INFO_REALIGN_3_PRIME chrX 21374630
chrX:21374630 A
A
 C
C
 10 a0001c0001t0003
a0001c0001t0010
a0001c0001t0011
others(7): Show 
a0001c0001t0003
a0001c0001t0010
a0001c0001t0011
a0001c0001t0034
a0001c0001t0035
a0001c0001t0037
a0001c0001t0040
a0001c0001t0041
a0001c0007t0036
a0002c0005t0003
 25 HG01081.hp1
HG01081.hp2
HG02280.hp1
others(22): Show 
HG01081.hp1
HG01081.hp2
HG02280.hp1
HG02717.hp1
HG02735.hp1
HG02886.hp2
HG02895.hp1
HG02976.hp2
HG03017.hp1
HG03041.hp1
HG03098.hp1
HG03209.hp1
HG03225.hp1
HG03579.hp1
HG03942.hp1
HG04204.hp1
NA18522.hp1
NA18953.hp1
NA18965.hp1
NA18967.hp1
NA18970.hp1
NA18994.hp1
NA18995.hp1
NA19043.hp1
NA19240.hp2
 5_prime_UTR_variant MODIFIER c.-268A>C
c.-268A>C
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 1/22 268 chrX 21374630
chrX:21374633 C
C
 A
A
 1 a0001c0001t0020
a0001c0001t0020
 1 HG01243.hp1
HG01243.hp1
 5_prime_UTR_variant MODIFIER c.-265C>A
c.-265C>A
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 1/22 265 chrX 21374633
chrX:21374772 G
G
 A
A
 2 a0001c0003t0014
a0001c0003t0026
a0001c0003t0014
a0001c0003t0026
 3 HG02615.hp1
HG02965.hp1
HG03471.hp1
HG02615.hp1
HG02965.hp1
HG03471.hp1
 5_prime_UTR_variant MODIFIER c.-126G>A
c.-126G>A
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 1/22 126 chrX 21374772
chrX:21652832 T
T
 G
G
 1 a0001c0001t0027
a0001c0001t0027
 1 HG02486.hp1
HG02486.hp1
 3_prime_UTR_variant MODIFIER c.*311T>G
c.*311T>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 22/22 311 chrX 21652832
chrX:21652882 CA
CA
 C
C
 1 a0001c0001t0033
a0001c0001t0033
 1 NA19006.hp1
NA19006.hp1
 3_prime_UTR_variant MODIFIER c.*365delA
c.*365delA
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 22/22 365 INFO_REALIGN_3_PRIME chrX 21652882
chrX:21652888 TA
TA
 T
T
 1 a0001c0001t0033
a0001c0001t0033
 1 NA19006.hp1
NA19006.hp1
 3_prime_UTR_variant MODIFIER c.*370delA
c.*370delA
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 22/22 370 INFO_REALIGN_3_PRIME chrX 21652888
chrX:21652894 ACAT
ACAT
 A
A
 1 a0001c0001t0033
a0001c0001t0033
 1 NA19006.hp1
NA19006.hp1
 3_prime_UTR_variant MODIFIER c.*374_*376delCAT
c.*374_*376delCAT
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 22/22 374 chrX 21652894
chrX:21652906 G
G
 GAATT
GAATT
 1 a0001c0001t0033
a0001c0001t0033
 1 NA19006.hp1
NA19006.hp1
 3_prime_UTR_variant MODIFIER c.*385_*386insAATT
c.*385_*386insAATT
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 22/22 386 chrX 21652906
chrX:21652937 TA
TA
 T
T
 1 a0001c0001t0033
a0001c0001t0033
 1 NA19006.hp1
NA19006.hp1
 3_prime_UTR_variant MODIFIER c.*419delA
c.*419delA
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 22/22 419 INFO_REALIGN_3_PRIME chrX 21652937
chrX:21652977 C
C
 A
A
 1 a0001c0001t0034
a0001c0001t0034
 1 HG02735.hp1
HG02735.hp1
 3_prime_UTR_variant MODIFIER c.*456C>A
c.*456C>A
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 22/22 456 chrX 21652977
chrX:21652987 G
G
 GCA
GCA
 1 a0001c0001t0033
a0001c0001t0033
 1 NA19006.hp1
NA19006.hp1
 3_prime_UTR_variant MODIFIER c.*469_*470dupCA
c.*469_*470dupCA
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 22/22 471 INFO_REALIGN_3_PRIME chrX 21652987
chrX:21653041 G
G
 GA
GA
 1 a0001c0001t0033
a0001c0001t0033
 1 NA19006.hp1
NA19006.hp1
 3_prime_UTR_variant MODIFIER c.*521dupA
c.*521dupA
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 22/22 522 INFO_REALIGN_3_PRIME chrX 21653041
chrX:21653134 T
T
 TG
TG
 1 a0001c0001t0032
a0001c0001t0032
 1 NA19063.hp1
NA19063.hp1
 3_prime_UTR_variant MODIFIER c.*615dupG
c.*615dupG
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 22/22 616 INFO_REALIGN_3_PRIME chrX 21653134
chrX:21653202 T
T
 TA
TA
 1 a0001c0001t0033
a0001c0001t0033
 1 NA19006.hp1
NA19006.hp1
 3_prime_UTR_variant MODIFIER c.*683dupA
c.*683dupA
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 22/22 684 INFO_REALIGN_3_PRIME chrX 21653202
chrX:21653236 AT
AT
 A
A
 1 a0001c0001t0033
a0001c0001t0033
 1 NA19006.hp1
NA19006.hp1
 3_prime_UTR_variant MODIFIER c.*719delT
c.*719delT
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 22/22 719 INFO_REALIGN_3_PRIME chrX 21653236
chrX:21653273 A
A
 ATGAGC
ATGAGC
 1 a0001c0001t0033
a0001c0001t0033
 1 NA19006.hp1
NA19006.hp1
 3_prime_UTR_variant MODIFIER c.*756_*757insCTGAG
c.*756_*757insCTGAG
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 22/22 757 INFO_REALIGN_3_PRIME chrX 21653273
chrX:21653316 TA
TA
 T
T
 1 a0001c0001t0033
a0001c0001t0033
 1 NA19006.hp1
NA19006.hp1
 3_prime_UTR_variant MODIFIER c.*800delA
c.*800delA
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 22/22 800 INFO_REALIGN_3_PRIME chrX 21653316
chrX:21653355 C
C
 CTA
CTA
 1 a0001c0001t0031
a0001c0001t0031
 1 HG02040.hp1
HG02040.hp1
 3_prime_UTR_variant MODIFIER c.*847_*848dupTA
c.*847_*848dupTA
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 22/22 849 INFO_REALIGN_3_PRIME chrX 21653355
chrX:21653374 TCA
TCA
 T
T
 1 a0001c0001t0033
a0001c0001t0033
 1 NA19006.hp1
NA19006.hp1
 3_prime_UTR_variant MODIFIER c.*854_*855delCA
c.*854_*855delCA
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 22/22 854 chrX 21653374
chrX:21653389 G
G
 GT
GT
 1 a0001c0001t0033
a0001c0001t0033
 1 NA19006.hp1
NA19006.hp1
 3_prime_UTR_variant MODIFIER c.*873dupT
c.*873dupT
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 22/22 874 INFO_REALIGN_3_PRIME chrX 21653389
chrX:21653445 TTC
TTC
 T
T
 1 a0001c0001t0033
a0001c0001t0033
 1 NA19006.hp1
NA19006.hp1
 3_prime_UTR_variant MODIFIER c.*925_*926delTC
c.*925_*926delTC
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 22/22 925 chrX 21653445
chrX:21653450 CT
CT
 C
C
 1 a0001c0001t0033
a0001c0001t0033
 1 NA19006.hp1
NA19006.hp1
 3_prime_UTR_variant MODIFIER c.*931delT
c.*931delT
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 22/22 931 INFO_REALIGN_3_PRIME chrX 21653450
chrX:21653480 A
A
 T
T
 1 a0001c0001t0033
a0001c0001t0033
 1 NA19006.hp1
NA19006.hp1
 3_prime_UTR_variant MODIFIER c.*959A>T
c.*959A>T
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 22/22 959 chrX 21653480
chrX:21653563 GA
GA
 G
G
 1 a0001c0001t0039
a0001c0001t0039
 1 NA19055.hp1
NA19055.hp1
 3_prime_UTR_variant MODIFIER c.*1047delA
c.*1047delA
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 22/22 1047 INFO_REALIGN_3_PRIME chrX 21653563
chrX:21653606 T
T
 A
A
 1 a0001c0001t0033
a0001c0001t0033
 1 NA19006.hp1
NA19006.hp1
 3_prime_UTR_variant MODIFIER c.*1085T>A
c.*1085T>A
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 22/22 1085 chrX 21653606
chrX:21653656 GT
GT
 G
G
 1 a0001c0001t0033
a0001c0001t0033
 1 NA19006.hp1
NA19006.hp1
 3_prime_UTR_variant MODIFIER c.*1142delT
c.*1142delT
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 22/22 1142 INFO_REALIGN_3_PRIME chrX 21653656
chrX:21653680 G
G
 GT
GT
 1 a0001c0001t0033
a0001c0001t0033
 1 NA19006.hp1
NA19006.hp1
 3_prime_UTR_variant MODIFIER c.*1161dupT
c.*1161dupT
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 22/22 1162 INFO_REALIGN_3_PRIME chrX 21653680
chrX:21653729 C
C
 CA
CA
 1 a0001c0001t0033
a0001c0001t0033
 1 NA19006.hp1
NA19006.hp1
 3_prime_UTR_variant MODIFIER c.*1209dupA
c.*1209dupA
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 22/22 1210 INFO_REALIGN_3_PRIME chrX 21653729
chrX:21653808 G
G
 A
A
 1 a0001c0001t0042
a0001c0001t0042
 1 HG02647.hp1
HG02647.hp1
 3_prime_UTR_variant MODIFIER c.*1287G>A
c.*1287G>A
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 22/22 1287 chrX 21653808
chrX:21653827 G
G
 GT
GT
 1 a0001c0001t0033
a0001c0001t0033
 1 NA19006.hp1
NA19006.hp1
 3_prime_UTR_variant MODIFIER c.*1313dupT
c.*1313dupT
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 22/22 1314 INFO_REALIGN_3_PRIME chrX 21653827
chrX:21653874 T
T
 TA
TA
 1 a0001c0001t0033
a0001c0001t0033
 1 NA19006.hp1
NA19006.hp1
 3_prime_UTR_variant MODIFIER c.*1357dupA
c.*1357dupA
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 22/22 1358 INFO_REALIGN_3_PRIME chrX 21653874
chrX:21653943 A
A
 AG
AG
 1 a0001c0001t0033
a0001c0001t0033
 1 NA19006.hp1
NA19006.hp1
 3_prime_UTR_variant MODIFIER c.*1423dupG
c.*1423dupG
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 22/22 1424 INFO_REALIGN_3_PRIME chrX 21653943
chrX:21654084 CCT
CCT
 C
C
 1 a0001c0001t0033
a0001c0001t0033
 1 NA19006.hp1
NA19006.hp1
 3_prime_UTR_variant MODIFIER c.*1564_*1565delCT
c.*1564_*1565delCT
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 22/22 1564 chrX 21654084
chrX:21654098 A
A
 T
T
 1 a0001c0001t0033
a0001c0001t0033
 1 NA19006.hp1
NA19006.hp1
 3_prime_UTR_variant MODIFIER c.*1577A>T
c.*1577A>T
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 22/22 1577 chrX 21654098
chrX:21654113 A
A
 C
C
 1 a0001c0001t0033
a0001c0001t0033
 1 NA19006.hp1
NA19006.hp1
 3_prime_UTR_variant MODIFIER c.*1592A>C
c.*1592A>C
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 22/22 1592 chrX 21654113
chrX:21654115 AT
AT
 A
A
 1 a0001c0001t0033
a0001c0001t0033
 1 NA19006.hp1
NA19006.hp1
 3_prime_UTR_variant MODIFIER c.*1597delT
c.*1597delT
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 22/22 1597 INFO_REALIGN_3_PRIME chrX 21654115
chrX:21654161 AT
AT
 A
A
 1 a0001c0001t0033
a0001c0001t0033
 1 NA19006.hp1
NA19006.hp1
 3_prime_UTR_variant MODIFIER c.*1644delT
c.*1644delT
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 22/22 1644 INFO_REALIGN_3_PRIME chrX 21654161
chrX:21654180 AT
AT
 A
A
 1 a0001c0001t0033
a0001c0001t0033
 1 NA19006.hp1
NA19006.hp1
 3_prime_UTR_variant MODIFIER c.*1664delT
c.*1664delT
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 22/22 1664 INFO_REALIGN_3_PRIME chrX 21654180
chrX:21654269 A
A
 ATG
ATG
 2 a0001c0001t0034
a0001c0001t0037
a0001c0001t0034
a0001c0001t0037
 2 HG02735.hp1
HG04204.hp1
HG02735.hp1
HG04204.hp1
 3_prime_UTR_variant MODIFIER c.*1750_*1751dupGT
c.*1750_*1751dupGT
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 22/22 1752 INFO_REALIGN_3_PRIME chrX 21654269
chrX:21654272 T
T
 TA
TA
 16 a0001c0001t0001
a0001c0001t0002
a0001c0001t0003
others(13): Show 
a0001c0001t0001
a0001c0001t0002
a0001c0001t0003
a0001c0001t0004
a0001c0001t0013
a0001c0001t0018
a0001c0001t0020
a0001c0001t0021
a0001c0001t0023
a0001c0001t0031
a0001c0001t0033
a0001c0001t0039
a0001c0001t0040
a0001c0002t0001
a0001c0003t0026
a0002c0005t0003
 103 HG00140.hp1
HG00280.hp1
HG00609.hp1
others(100): Show 
HG00140.hp1
HG00280.hp1
HG00609.hp1
HG00621.hp1
HG00642.hp1
HG00673.hp1
HG00735.hp1
HG00735.hp2
HG00738.hp1
HG00741.hp1
HG00741.hp2
HG01071.hp1
HG01074.hp1
HG01081.hp2
HG01106.hp1
HG01167.hp1
HG01192.hp1
HG01243.hp1
HG01255.hp1
HG01256.hp1
HG01258.hp1
HG01261.hp1
HG01358.hp1
HG01433.hp1
HG01515.hp1
HG01928.hp1
HG01934.hp1
HG01943.hp1
HG02015.hp1
HG02040.hp1
HG02056.hp1
HG02071.hp1
HG02074.hp1
HG02083.hp1
HG02129.hp1
HG02135.hp1
HG02258.hp1
HG02280.hp1
HG02698.hp1
HG02717.hp1
HG02738.hp1
HG02809.hp2
HG02886.hp2
HG02895.hp1
HG02965.hp1
HG02976.hp2
HG03017.hp1
HG03041.hp2
HG03490.hp1
HG03491.hp1
HG03492.hp1
HG03516.hp1
HG03654.hp1
HG03710.hp1
HG03942.hp1
HG04115.hp1
HG04228.hp1
NA18612.hp1
NA18943.hp1
NA18944.hp1
NA18945.hp1
NA18948.hp1
NA18952.hp1
NA18953.hp1
NA18955.hp1
NA18959.hp1
NA18965.hp1
NA18966.hp1
NA18970.hp1
NA18971.hp1
NA18974.hp1
NA18982.hp1
NA18983.hp1
NA18984.hp1
NA18988.hp1
NA18989.hp1
NA18990.hp1
NA18994.hp1
NA18995.hp1
NA19004.hp1
NA19005.hp1
NA19006.hp1
NA19007.hp1
NA19009.hp1
NA19043.hp1
NA19055.hp1
NA19056.hp1
NA19060.hp1
NA19066.hp1
NA19068.hp1
NA19070.hp1
NA19076.hp1
NA19082.hp1
NA19085.hp1
NA19086.hp1
NA19088.hp1
NA19089.hp1
NA19091.hp1
NA20300.hp1
NA20752.hp1
NA20805.hp1
NA20905.hp1
homoSapiens_chm13v2.hp1
 3_prime_UTR_variant MODIFIER c.*1773dupA
c.*1773dupA
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 22/22 1774 INFO_REALIGN_3_PRIME chrX 21654272
chrX:21654272 T
T
 TAA
TAA
 7 a0001c0001t0007
a0001c0001t0008
a0001c0001t0015
others(4): Show 
a0001c0001t0007
a0001c0001t0008
a0001c0001t0015
a0001c0001t0032
a0001c0001t0035
a0001c0001t0038
a0001c0002t0007
 14 HG01069.hp1
HG01952.hp1
HG02027.hp1
others(11): Show 
HG01069.hp1
HG01952.hp1
HG02027.hp1
HG02132.hp1
HG02922.hp1
HG03688.hp1
NA18967.hp1
NA18977.hp1
NA18986.hp1
NA19000.hp1
NA19012.hp1
NA19063.hp1
NA19072.hp1
NA19240.hp1
 3_prime_UTR_variant MODIFIER c.*1772_*1773dupAA
c.*1772_*1773dupAA
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 22/22 1774 INFO_REALIGN_3_PRIME chrX 21654272
chrX:21654272 T
T
 TAAA
TAAA
 8 a0001c0001t0006
a0001c0001t0010
a0001c0001t0017
others(5): Show 
a0001c0001t0006
a0001c0001t0010
a0001c0001t0017
a0001c0001t0019
a0001c0001t0024
a0001c0001t0027
a0001c0003t0014
a0003c0004t0006
 16 HG01071.hp2
HG01109.hp1
HG01884.hp1
others(13): Show 
HG01071.hp2
HG01109.hp1
HG01884.hp1
HG01884.hp2
HG02486.hp1
HG02615.hp1
HG02615.hp2
HG02886.hp1
HG02922.hp2
HG02976.hp1
HG03130.hp1
HG03209.hp1
HG03225.hp1
HG03471.hp1
NA19240.hp2
NA20300.hp2
 3_prime_UTR_variant MODIFIER c.*1771_*1773dupAAA
c.*1771_*1773dupAAA
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 22/22 1774 INFO_REALIGN_3_PRIME chrX 21654272
chrX:21654272 T
T
 TAAAA
TAAAA
 1 a0001c0006t0028
a0001c0006t0028
 1 HG03516.hp2
HG03516.hp2
 3_prime_UTR_variant MODIFIER c.*1770_*1773dupAAAA
c.*1770_*1773dupAAAA
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 22/22 1774 INFO_REALIGN_3_PRIME chrX 21654272
chrX:21654272 TAAAAAA
TAAAAAA
 T
T
 1 a0001c0001t0030
a0001c0001t0030
 1 HG04199.hp1
HG04199.hp1
 3_prime_UTR_variant MODIFIER c.*1768_*1773delAAAA
others(2): Show 
c.*1768_*1773delAAAAAA
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 22/22 1768 INFO_REALIGN_3_PRIME chrX 21654272
chrX:21654287 A
A
 C
C
 3 a0001c0001t0009
a0001c0001t0041
a0001c0001t0042
a0001c0001t0009
a0001c0001t0041
a0001c0001t0042
 6 HG02280.hp2
HG02572.hp1
HG02647.hp1
others(3): Show 
HG02280.hp2
HG02572.hp1
HG02647.hp1
HG02809.hp1
HG03098.hp1
HG03486.hp1
 3_prime_UTR_variant MODIFIER c.*1766A>C
c.*1766A>C
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 22/22 1766 chrX 21654287
chrX:21654288 A
A
 AAC
AAC
 1 a0001c0001t0029
a0001c0001t0029
 1 HG01099.hp1
HG01099.hp1
 3_prime_UTR_variant MODIFIER c.*1768_*1769insCA
c.*1768_*1769insCA
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 22/22 1769 INFO_REALIGN_3_PRIME chrX 21654288
chrX:21654288 A
A
 C
C
 1 a0001c0007t0036
a0001c0007t0036
 1 HG01081.hp1
HG01081.hp1
 3_prime_UTR_variant MODIFIER c.*1767A>C
c.*1767A>C
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 22/22 1767 chrX 21654288
chrX:21654289 A
A
 AC
AC
 1 a0001c0001t0022
a0001c0001t0022
 1 HG02055.hp1
HG02055.hp1
 3_prime_UTR_variant MODIFIER c.*1768_*1769insC
c.*1768_*1769insC
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 22/22 1769 chrX 21654289
chrX:21654295 C
C
 A
A
 1 a0001c0001t0025
a0001c0001t0025
 1 NA19062.hp1
NA19062.hp1
 3_prime_UTR_variant MODIFIER c.*1774C>A
c.*1774C>A
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 22/22 1774 chrX 21654295
chrX:21654296 A
A
 C
C
 1 a0001c0001t0025
a0001c0001t0025
 1 NA19062.hp1
NA19062.hp1
 3_prime_UTR_variant MODIFIER c.*1775A>C
c.*1775A>C
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 22/22 1775 chrX 21654296
chrX:21654502 TAA
TAA
 T
T
 1 a0001c0001t0038
a0001c0001t0038
 1 NA19240.hp1
NA19240.hp1
 3_prime_UTR_variant MODIFIER c.*1983_*1984delAA
c.*1983_*1984delAA
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 22/22 1983 INFO_REALIGN_3_PRIME chrX 21654502

chr:pos ref alt #
# of ghapid:genebody level
 ghapids #
# of haplotypeids
 haplotypeids annotation impact hgvs_c hgvs_p genename geneid featuretype featureid genebody_biotype rank cdna
cdna pos length
 cds
cds pos length
 aa
aa pos length
 distance status chr pos
chrX:21375025 A
A
 AG
AG
 1 a0001c0001t0032g0163
a0001c0001t0032g0163
 1 NA19063.hp1
NA19063.hp1
 intron_variant MODIFIER c.64+69dupG
c.64+69dupG
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 1/21 INFO_REALIGN_3_PRIME chrX 21375025
chrX:21375244 C
C
 G
G
 12 a0001c0001t0001g0158
a0001c0001t0003g0151
a0001c0001t0006g0155
others(9): Show 
a0001c0001t0001g0158
a0001c0001t0003g0151
a0001c0001t0006g0155
a0001c0001t0006g0157
a0001c0001t0006g0159
a0001c0001t0006g0160
a0001c0001t0006g0161
a0001c0001t0010g0152
a0001c0001t0010g0153
a0001c0001t0010g0162
a0001c0001t0024g0156
a0003c0004t0006g0154
 12 HG01081.hp2
HG01884.hp1
HG02615.hp2
others(9): Show 
HG01081.hp2
HG01884.hp1
HG02615.hp2
HG02886.hp1
HG02922.hp2
HG02976.hp1
HG03130.hp1
HG03209.hp1
HG03225.hp1
HG03516.hp1
NA19240.hp2
NA20300.hp2
 intron_variant MODIFIER c.64+283C>G
c.64+283C>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 1/21 chrX 21375244
chrX:21375625 G
G
 A
A
 1 a0001c0001t0001g0001
a0001c0001t0001g0001
 1 NA19068.hp1
NA19068.hp1
 intron_variant MODIFIER c.64+664G>A
c.64+664G>A
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 1/21 chrX 21375625
chrX:21375918 C
C
 T
T
 1 a0001c0001t0038g0150
a0001c0001t0038g0150
 1 NA19240.hp1
NA19240.hp1
 intron_variant MODIFIER c.64+957C>T
c.64+957C>T
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 1/21 chrX 21375918
chrX:21376153 A
A
 G
G
 3 a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
 3 HG02615.hp1
HG02965.hp1
HG03471.hp1
HG02615.hp1
HG02965.hp1
HG03471.hp1
 intron_variant MODIFIER c.64+1192A>G
c.64+1192A>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 1/21 chrX 21376153
chrX:21376234 A
A
 AT
AT
 1 a0001c0001t0010g0162
a0001c0001t0010g0162
 1 HG03209.hp1
HG03209.hp1
 intron_variant MODIFIER c.64+1281dupT
c.64+1281dupT
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 1/21 INFO_REALIGN_3_PRIME chrX 21376234
chrX:21376601 C
C
 T
T
 1 a0001c0001t0017g0146
a0001c0001t0017g0146
 1 HG01109.hp1
HG01109.hp1
 intron_variant MODIFIER c.64+1640C>T
c.64+1640C>T
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 1/21 chrX 21376601
chrX:21376778 A
A
 G
G
 1 a0001c0001t0001g0145
a0001c0001t0001g0145
 1 NA19082.hp1
NA19082.hp1
 intron_variant MODIFIER c.64+1817A>G
c.64+1817A>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 1/21 chrX 21376778
chrX:21377049 G
G
 A
A
 1 a0001c0001t0033g0002
a0001c0001t0033g0002
 1 NA19006.hp1
NA19006.hp1
 intron_variant MODIFIER c.64+2088G>A
c.64+2088G>A
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 1/21 chrX 21377049
chrX:21377618 G
G
 T
T
 2 a0001c0001t0008g0143
a0001c0001t0039g0144
a0001c0001t0008g0143
a0001c0001t0039g0144
 2 NA18986.hp1
NA19055.hp1
NA18986.hp1
NA19055.hp1
 intron_variant MODIFIER c.64+2657G>T
c.64+2657G>T
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 1/21 chrX 21377618
chrX:21377901 A
A
 T
T
 1 a0001c0001t0012g0142
a0001c0001t0012g0142
 1 HG03139.hp1
HG03139.hp1
 intron_variant MODIFIER c.64+2940A>T
c.64+2940A>T
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 1/21 chrX 21377901
chrX:21377911 G
G
 A
A
 1 a0001c0001t0002g0003
a0001c0001t0002g0003
 1 HG00621.hp1
HG00621.hp1
 intron_variant MODIFIER c.64+2950G>A
c.64+2950G>A
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 1/21 chrX 21377911
chrX:21378232 A
A
 G
G
 2 a0001c0001t0007g0140
a0001c0001t0020g0141
a0001c0001t0007g0140
a0001c0001t0020g0141
 2 HG01243.hp1
HG02922.hp1
HG01243.hp1
HG02922.hp1
 intron_variant MODIFIER c.64+3271A>G
c.64+3271A>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 1/21 chrX 21378232
chrX:21378261 C
C
 A
A
 2 a0001c0001t0007g0140
a0001c0001t0020g0141
a0001c0001t0007g0140
a0001c0001t0020g0141
 2 HG01243.hp1
HG02922.hp1
HG01243.hp1
HG02922.hp1
 intron_variant MODIFIER c.64+3300C>A
c.64+3300C>A
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 1/21 chrX 21378261
chrX:21378644 T
T
 A
A
 162 a0001c0001t0001g0001
a0001c0001t0001g0035
a0001c0001t0001g0036
others(159): Show 
a0001c0001t0001g0001
a0001c0001t0001g0035
a0001c0001t0001g0036
a0001c0001t0001g0037
a0001c0001t0001g0039
a0001c0001t0001g0048
a0001c0001t0001g0051
a0001c0001t0001g0052
a0001c0001t0001g0053
a0001c0001t0001g0058
a0001c0001t0001g0060
a0001c0001t0001g0062
a0001c0001t0001g0067
a0001c0001t0001g0068
a0001c0001t0001g0069
a0001c0001t0001g0071
a0001c0001t0001g0073
a0001c0001t0001g0074
a0001c0001t0001g0075
a0001c0001t0001g0076
a0001c0001t0001g0077
a0001c0001t0001g0078
a0001c0001t0001g0080
a0001c0001t0001g0081
a0001c0001t0001g0082
a0001c0001t0001g0083
a0001c0001t0001g0084
a0001c0001t0001g0087
a0001c0001t0001g0089
a0001c0001t0001g0090
a0001c0001t0001g0093
a0001c0001t0001g0094
a0001c0001t0001g0096
a0001c0001t0001g0097
a0001c0001t0001g0102
a0001c0001t0001g0103
a0001c0001t0001g0109
a0001c0001t0001g0128
a0001c0001t0001g0131
a0001c0001t0001g0134
a0001c0001t0001g0137
a0001c0001t0001g0145
a0001c0001t0001g0158
a0001c0001t0002g0003
a0001c0001t0002g0004
a0001c0001t0002g0019
a0001c0001t0002g0028
a0001c0001t0002g0043
a0001c0001t0002g0046
a0001c0001t0002g0047
a0001c0001t0002g0049
a0001c0001t0002g0050
a0001c0001t0002g0110
a0001c0001t0002g0111
a0001c0001t0002g0112
a0001c0001t0002g0113
a0001c0001t0002g0114
a0001c0001t0002g0115
a0001c0001t0002g0118
a0001c0001t0002g0119
a0001c0001t0002g0120
a0001c0001t0002g0121
a0001c0001t0002g0122
a0001c0001t0002g0125
a0001c0001t0002g0126
a0001c0001t0003g0015
a0001c0001t0003g0024
a0001c0001t0003g0029
a0001c0001t0003g0031
a0001c0001t0003g0044
a0001c0001t0003g0061
a0001c0001t0003g0070
a0001c0001t0003g0101
a0001c0001t0003g0116
a0001c0001t0003g0133
a0001c0001t0003g0136
a0001c0001t0003g0151
a0001c0001t0004g0020
a0001c0001t0004g0021
a0001c0001t0004g0055
a0001c0001t0004g0056
a0001c0001t0004g0057
a0001c0001t0004g0064
a0001c0001t0004g0117
a0001c0001t0004g0129
a0001c0001t0004g0132
a0001c0001t0005g0063
a0001c0001t0005g0072
a0001c0001t0005g0079
a0001c0001t0005g0095
a0001c0001t0005g0099
a0001c0001t0006g0155
a0001c0001t0006g0157
a0001c0001t0006g0159
a0001c0001t0006g0160
a0001c0001t0006g0161
a0001c0001t0007g0022
a0001c0001t0007g0127
a0001c0001t0007g0140
a0001c0001t0008g0005
a0001c0001t0008g0124
a0001c0001t0008g0135
a0001c0001t0008g0143
a0001c0001t0009g0010
a0001c0001t0009g0011
a0001c0001t0009g0012
a0001c0001t0009g0013
a0001c0001t0010g0152
a0001c0001t0010g0153
a0001c0001t0010g0162
a0001c0001t0011g0016
a0001c0001t0011g0017
a0001c0001t0011g0138
a0001c0001t0012g0025
a0001c0001t0012g0045
a0001c0001t0012g0142
a0001c0001t0013g0066
a0001c0001t0013g0100
a0001c0001t0015g0038
a0001c0001t0015g0098
a0001c0001t0016g0032
a0001c0001t0016g0085
a0001c0001t0017g0018
a0001c0001t0017g0146
a0001c0001t0018g0123
a0001c0001t0019g0014
a0001c0001t0020g0141
a0001c0001t0021g0088
a0001c0001t0022g0033
a0001c0001t0023g0006
a0001c0001t0024g0156
a0001c0001t0025g0130
a0001c0001t0027g0034
a0001c0001t0029g0023
a0001c0001t0030g0086
a0001c0001t0031g0065
a0001c0001t0032g0163
a0001c0001t0033g0002
a0001c0001t0034g0091
a0001c0001t0035g0054
a0001c0001t0037g0092
a0001c0001t0038g0150
a0001c0001t0039g0144
a0001c0001t0040g0027
a0001c0001t0041g0009
a0001c0001t0042g0008
a0001c0001t0043g0007
a0001c0002t0001g0042
a0001c0002t0001g0104
a0001c0002t0001g0105
a0001c0002t0001g0107
a0001c0002t0001g0108
a0001c0002t0005g0106
a0001c0002t0007g0040
a0001c0002t0007g0041
a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
a0001c0006t0028g0059
a0001c0007t0036g0026
a0002c0005t0003g0030
a0003c0004t0006g0154
 162 HG00140.hp1
HG00280.hp1
HG00609.hp1
others(159): Show 
HG00140.hp1
HG00280.hp1
HG00609.hp1
HG00621.hp1
HG00642.hp1
HG00673.hp1
HG00735.hp1
HG00735.hp2
HG00738.hp1
HG00741.hp1
HG00741.hp2
HG01069.hp1
HG01071.hp1
HG01071.hp2
HG01074.hp1
HG01081.hp1
HG01081.hp2
HG01099.hp1
HG01106.hp1
HG01109.hp1
HG01167.hp1
HG01192.hp1
HG01243.hp1
HG01255.hp1
HG01256.hp1
HG01258.hp1
HG01261.hp1
HG01358.hp1
HG01433.hp1
HG01515.hp1
HG01884.hp1
HG01884.hp2
HG01928.hp1
HG01934.hp1
HG01943.hp1
HG01952.hp1
HG02015.hp1
HG02027.hp1
HG02040.hp1
HG02055.hp1
HG02056.hp1
HG02071.hp1
HG02074.hp1
HG02083.hp1
HG02129.hp1
HG02132.hp1
HG02135.hp1
HG02145.hp1
HG02258.hp1
HG02280.hp1
HG02280.hp2
HG02300.hp1
HG02486.hp1
HG02572.hp1
HG02602.hp1
HG02615.hp1
HG02615.hp2
HG02647.hp1
HG02698.hp1
HG02717.hp1
HG02735.hp1
HG02738.hp1
HG02809.hp1
HG02809.hp2
HG02886.hp1
HG02886.hp2
HG02895.hp1
HG02922.hp1
HG02922.hp2
HG02965.hp1
HG02976.hp1
HG02976.hp2
HG03017.hp1
HG03041.hp1
HG03041.hp2
HG03098.hp1
HG03130.hp1
HG03139.hp1
HG03209.hp1
HG03225.hp1
HG03471.hp1
HG03486.hp1
HG03486.hp2
HG03490.hp1
HG03491.hp1
HG03491.hp2
HG03492.hp1
HG03516.hp1
HG03516.hp2
HG03579.hp1
HG03654.hp1
HG03688.hp1
HG03710.hp1
HG03942.hp1
HG04115.hp1
HG04199.hp1
HG04204.hp1
HG04228.hp1
NA18522.hp1
NA18612.hp1
NA18747.hp1
NA18943.hp1
NA18944.hp1
NA18945.hp1
NA18948.hp1
NA18952.hp1
NA18953.hp1
NA18955.hp1
NA18959.hp1
NA18960.hp1
NA18961.hp1
NA18962.hp1
NA18965.hp1
NA18966.hp1
NA18967.hp1
NA18970.hp1
NA18971.hp1
NA18974.hp1
NA18977.hp1
NA18982.hp1
NA18983.hp1
NA18984.hp1
NA18986.hp1
NA18988.hp1
NA18989.hp1
NA18990.hp1
NA18994.hp1
NA18995.hp1
NA19000.hp1
NA19004.hp1
NA19005.hp1
NA19006.hp1
NA19007.hp1
NA19009.hp1
NA19012.hp1
NA19043.hp1
NA19055.hp1
NA19056.hp1
NA19058.hp1
NA19060.hp1
NA19062.hp1
NA19063.hp1
NA19066.hp1
NA19068.hp1
NA19070.hp1
NA19072.hp1
NA19076.hp1
NA19079.hp1
NA19082.hp1
NA19085.hp1
NA19086.hp1
NA19088.hp1
NA19089.hp1
NA19091.hp1
NA19240.hp1
NA19240.hp2
NA20300.hp1
NA20300.hp2
NA20752.hp1
NA20805.hp1
NA20905.hp1
homoSapiens_chm13v2.hp1
 intron_variant MODIFIER c.64+3683T>A
c.64+3683T>A
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 1/21 chrX 21378644
chrX:21379575 T
T
 G
G
 2 a0001c0001t0002g0004
a0001c0001t0008g0005
a0001c0001t0002g0004
a0001c0001t0008g0005
 2 HG01069.hp1
HG01071.hp1
HG01069.hp1
HG01071.hp1
 intron_variant MODIFIER c.64+4614T>G
c.64+4614T>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 1/21 chrX 21379575
chrX:21380310 C
C
 T
T
 1 a0001c0001t0011g0138
a0001c0001t0011g0138
 1 HG03041.hp1
HG03041.hp1
 intron_variant MODIFIER c.64+5349C>T
c.64+5349C>T
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 1/21 chrX 21380310
chrX:21380443 C
C
 CT
CT
 5 a0001c0001t0001g0137
a0001c0001t0003g0136
a0001c0001t0008g0135
others(2): Show 
a0001c0001t0001g0137
a0001c0001t0003g0136
a0001c0001t0008g0135
a0001c0001t0033g0002
a0001c0001t0039g0144
 5 HG03490.hp1
NA18965.hp1
NA19000.hp1
others(2): Show 
HG03490.hp1
NA18965.hp1
NA19000.hp1
NA19006.hp1
NA19055.hp1
 intron_variant MODIFIER c.64+5503dupT
c.64+5503dupT
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 1/21 INFO_REALIGN_3_PRIME chrX 21380443
chrX:21380443 CT
CT
 C
C
 31 a0001c0001t0001g0158
a0001c0001t0002g0004
a0001c0001t0002g0019
others(28): Show 
a0001c0001t0001g0158
a0001c0001t0002g0004
a0001c0001t0002g0019
a0001c0001t0002g0028
a0001c0001t0003g0024
a0001c0001t0003g0029
a0001c0001t0003g0031
a0001c0001t0004g0020
a0001c0001t0004g0021
a0001c0001t0006g0155
a0001c0001t0006g0157
a0001c0001t0006g0159
a0001c0001t0006g0160
a0001c0001t0006g0161
a0001c0001t0007g0022
a0001c0001t0008g0005
a0001c0001t0010g0152
a0001c0001t0010g0153
a0001c0001t0010g0162
a0001c0001t0012g0025
a0001c0001t0016g0032
a0001c0001t0017g0146
a0001c0001t0022g0033
a0001c0001t0024g0156
a0001c0001t0027g0034
a0001c0001t0029g0023
a0001c0001t0038g0150
a0001c0001t0040g0027
a0001c0007t0036g0026
a0002c0005t0003g0030
a0003c0004t0006g0154
 31 HG01069.hp1
HG01071.hp1
HG01081.hp1
others(28): Show 
HG01069.hp1
HG01071.hp1
HG01081.hp1
HG01099.hp1
HG01106.hp1
HG01109.hp1
HG01192.hp1
HG01256.hp1
HG01884.hp1
HG02055.hp1
HG02132.hp1
HG02258.hp1
HG02280.hp1
HG02486.hp1
HG02602.hp1
HG02615.hp2
HG02886.hp1
HG02886.hp2
HG02895.hp1
HG02922.hp2
HG02976.hp1
HG02976.hp2
HG03130.hp1
HG03209.hp1
HG03225.hp1
HG03486.hp2
HG03516.hp1
NA19043.hp1
NA19240.hp1
NA19240.hp2
NA20300.hp2
 intron_variant MODIFIER c.64+5503delT
c.64+5503delT
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 1/21 INFO_REALIGN_3_PRIME chrX 21380443
chrX:21380443 CTT
CTT
 C
C
 15 a0001c0001t0003g0015
a0001c0001t0003g0151
a0001c0001t0007g0140
others(12): Show 
a0001c0001t0003g0015
a0001c0001t0003g0151
a0001c0001t0007g0140
a0001c0001t0009g0010
a0001c0001t0009g0011
a0001c0001t0009g0012
a0001c0001t0009g0013
a0001c0001t0011g0016
a0001c0001t0011g0017
a0001c0001t0011g0138
a0001c0001t0017g0018
a0001c0001t0019g0014
a0001c0001t0020g0141
a0001c0001t0041g0009
a0001c0001t0042g0008
 15 HG01071.hp2
HG01081.hp2
HG01243.hp1
others(12): Show 
HG01071.hp2
HG01081.hp2
HG01243.hp1
HG01884.hp2
HG02280.hp2
HG02572.hp1
HG02647.hp1
HG02717.hp1
HG02809.hp1
HG02922.hp1
HG03041.hp1
HG03098.hp1
HG03486.hp1
HG03579.hp1
NA18522.hp1
 intron_variant MODIFIER c.64+5502_64+5503del
others(2): Show 
c.64+5502_64+5503delTT
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 1/21 INFO_REALIGN_3_PRIME chrX 21380443
chrX:21380443 CTTT
CTTT
 C
C
 2 a0001c0001t0023g0006
a0001c0001t0043g0007
a0001c0001t0023g0006
a0001c0001t0043g0007
 2 HG03491.hp2
HG03654.hp1
HG03491.hp2
HG03654.hp1
 intron_variant MODIFIER c.64+5501_64+5503del
others(3): Show 
c.64+5501_64+5503delTTT
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 1/21 INFO_REALIGN_3_PRIME chrX 21380443
chrX:21380634 C
C
 G
G
 33 a0001c0001t0001g0158
a0001c0001t0003g0015
a0001c0001t0003g0151
others(30): Show 
a0001c0001t0001g0158
a0001c0001t0003g0015
a0001c0001t0003g0151
a0001c0001t0006g0155
a0001c0001t0006g0157
a0001c0001t0006g0159
a0001c0001t0006g0160
a0001c0001t0006g0161
a0001c0001t0007g0140
a0001c0001t0009g0010
a0001c0001t0009g0011
a0001c0001t0009g0012
a0001c0001t0009g0013
a0001c0001t0010g0152
a0001c0001t0010g0153
a0001c0001t0010g0162
a0001c0001t0011g0016
a0001c0001t0011g0017
a0001c0001t0011g0138
a0001c0001t0017g0018
a0001c0001t0019g0014
a0001c0001t0020g0141
a0001c0001t0022g0033
a0001c0001t0023g0006
a0001c0001t0024g0156
a0001c0001t0027g0034
a0001c0001t0041g0009
a0001c0001t0042g0008
a0001c0001t0043g0007
a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
a0003c0004t0006g0154
 33 HG01071.hp2
HG01081.hp2
HG01243.hp1
others(30): Show 
HG01071.hp2
HG01081.hp2
HG01243.hp1
HG01884.hp1
HG01884.hp2
HG02055.hp1
HG02280.hp2
HG02486.hp1
HG02572.hp1
HG02615.hp1
HG02615.hp2
HG02647.hp1
HG02717.hp1
HG02809.hp1
HG02886.hp1
HG02922.hp1
HG02922.hp2
HG02965.hp1
HG02976.hp1
HG03041.hp1
HG03098.hp1
HG03130.hp1
HG03209.hp1
HG03225.hp1
HG03471.hp1
HG03486.hp1
HG03491.hp2
HG03516.hp1
HG03579.hp1
HG03654.hp1
NA18522.hp1
NA19240.hp2
NA20300.hp2
 intron_variant MODIFIER c.64+5673C>G
c.64+5673C>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 1/21 chrX 21380634
chrX:21380722 A
A
 C
C
 2 a0001c0001t0001g0134
a0001c0001t0003g0133
a0001c0001t0001g0134
a0001c0001t0003g0133
 2 HG02071.hp1
NA18953.hp1
HG02071.hp1
NA18953.hp1
 intron_variant MODIFIER c.64+5761A>C
c.64+5761A>C
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 1/21 chrX 21380722
chrX:21380739 C
C
 T
T
 2 a0001c0001t0004g0132
a0001c0001t0016g0032
a0001c0001t0004g0132
a0001c0001t0016g0032
 2 HG02602.hp1
NA20752.hp1
HG02602.hp1
NA20752.hp1
 intron_variant MODIFIER c.64+5778C>T
c.64+5778C>T
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 1/21 chrX 21380739
chrX:21381138 G
G
 T
T
 3 a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
 3 HG02615.hp1
HG02965.hp1
HG03471.hp1
HG02615.hp1
HG02965.hp1
HG03471.hp1
 intron_variant MODIFIER c.64+6177G>T
c.64+6177G>T
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 1/21 chrX 21381138
chrX:21381225 C
C
 T
T
 1 a0001c0001t0003g0031
a0001c0001t0003g0031
 1 HG02976.hp2
HG02976.hp2
 intron_variant MODIFIER c.64+6264C>T
c.64+6264C>T
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 1/21 chrX 21381225
chrX:21381649 A
A
 G
G
 2 a0001c0001t0007g0140
a0001c0001t0020g0141
a0001c0001t0007g0140
a0001c0001t0020g0141
 2 HG01243.hp1
HG02922.hp1
HG01243.hp1
HG02922.hp1
 intron_variant MODIFIER c.64+6688A>G
c.64+6688A>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 1/21 chrX 21381649
chrX:21381690 G
G
 A
A
 1 a0001c0001t0042g0008
a0001c0001t0042g0008
 1 HG02647.hp1
HG02647.hp1
 intron_variant MODIFIER c.64+6729G>A
c.64+6729G>A
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 1/21 chrX 21381690
chrX:21381910 C
C
 G
G
 1 a0001c0001t0001g0131
a0001c0001t0001g0131
 1 NA18959.hp1
NA18959.hp1
 intron_variant MODIFIER c.64+6949C>G
c.64+6949C>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 1/21 chrX 21381910
chrX:21382102 C
C
 A
A
 1 a0001c0001t0001g0035
a0001c0001t0001g0035
 1 HG02056.hp1
HG02056.hp1
 intron_variant MODIFIER c.64+7141C>A
c.64+7141C>A
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 1/21 chrX 21382102
chrX:21382859 C
C
 G
G
 1 a0001c0001t0025g0130
a0001c0001t0025g0130
 1 NA19062.hp1
NA19062.hp1
 intron_variant MODIFIER c.64+7898C>G
c.64+7898C>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 1/21 chrX 21382859
chrX:21383652 C
C
 T
T
 1 a0001c0001t0004g0129
a0001c0001t0004g0129
 1 HG00609.hp1
HG00609.hp1
 intron_variant MODIFIER c.64+8691C>T
c.64+8691C>T
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 1/21 chrX 21383652
chrX:21384319 A
A
 T
T
 1 a0001c0001t0003g0151
a0001c0001t0003g0151
 1 HG01081.hp2
HG01081.hp2
 intron_variant MODIFIER c.64+9358A>T
c.64+9358A>T
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 1/21 chrX 21384319
chrX:21384626 A
A
 G
G
 1 a0001c0001t0001g0128
a0001c0001t0001g0128
 1 NA19066.hp1
NA19066.hp1
 intron_variant MODIFIER c.64+9665A>G
c.64+9665A>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 1/21 chrX 21384626
chrX:21385318 A
A
 G
G
 1 a0001c0001t0017g0018
a0001c0001t0017g0018
 1 HG01071.hp2
HG01071.hp2
 intron_variant MODIFIER c.64+10357A>G
c.64+10357A>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 1/21 chrX 21385318
chrX:21386018 C
C
 CA
CA
 32 a0001c0001t0001g0036
a0001c0001t0001g0037
a0001c0001t0001g0039
others(29): Show 
a0001c0001t0001g0036
a0001c0001t0001g0037
a0001c0001t0001g0039
a0001c0001t0001g0131
a0001c0001t0001g0134
a0001c0001t0001g0145
a0001c0001t0001g0158
a0001c0001t0002g0003
a0001c0001t0002g0019
a0001c0001t0002g0043
a0001c0001t0002g0046
a0001c0001t0003g0044
a0001c0001t0003g0133
a0001c0001t0003g0151
a0001c0001t0006g0155
a0001c0001t0006g0157
a0001c0001t0006g0159
a0001c0001t0006g0160
a0001c0001t0006g0161
a0001c0001t0010g0162
a0001c0001t0012g0045
a0001c0001t0015g0038
a0001c0001t0017g0146
a0001c0001t0022g0033
a0001c0001t0024g0156
a0001c0001t0025g0130
a0001c0001t0027g0034
a0001c0001t0041g0009
a0001c0002t0001g0042
a0001c0002t0007g0040
a0001c0002t0007g0041
a0003c0004t0006g0154
 32 HG00621.hp1
HG00642.hp1
HG01081.hp2
others(29): Show 
HG00621.hp1
HG00642.hp1
HG01081.hp2
HG01106.hp1
HG01109.hp1
HG01884.hp1
HG01934.hp1
HG02027.hp1
HG02055.hp1
HG02071.hp1
HG02083.hp1
HG02135.hp1
HG02145.hp1
HG02486.hp1
HG02615.hp2
HG02809.hp2
HG02886.hp1
HG02922.hp2
HG02976.hp1
HG03098.hp1
HG03130.hp1
HG03209.hp1
HG03516.hp1
HG03688.hp1
HG03942.hp1
HG04115.hp1
NA18953.hp1
NA18959.hp1
NA18977.hp1
NA19062.hp1
NA19082.hp1
NA20300.hp2
 intron_variant MODIFIER c.64+11081dupA
c.64+11081dupA
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 1/21 INFO_REALIGN_3_PRIME chrX 21386018
chrX:21386018 C
C
 CAA
CAA
 2 a0001c0001t0010g0152
a0001c0001t0010g0153
a0001c0001t0010g0152
a0001c0001t0010g0153
 2 HG03225.hp1
NA19240.hp2
HG03225.hp1
NA19240.hp2
 intron_variant MODIFIER c.64+11080_64+11081d
others(4): Show 
c.64+11080_64+11081dupAA
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 1/21 INFO_REALIGN_3_PRIME chrX 21386018
chrX:21386018 CA
CA
 C
C
 9 a0001c0001t0003g0015
a0001c0001t0007g0127
a0001c0001t0011g0016
others(6): Show 
a0001c0001t0003g0015
a0001c0001t0007g0127
a0001c0001t0011g0016
a0001c0001t0011g0017
a0001c0001t0011g0138
a0001c0001t0043g0007
a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
 9 HG02615.hp1
HG02717.hp1
HG02965.hp1
others(6): Show 
HG02615.hp1
HG02717.hp1
HG02965.hp1
HG03041.hp1
HG03471.hp1
HG03491.hp2
HG03579.hp1
NA18522.hp1
NA19072.hp1
 intron_variant MODIFIER c.64+11081delA
c.64+11081delA
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 1/21 INFO_REALIGN_3_PRIME chrX 21386018
chrX:21386428 T
T
 C
C
 1 a0001c0001t0012g0142
a0001c0001t0012g0142
 1 HG03139.hp1
HG03139.hp1
 intron_variant MODIFIER c.64+11467T>C
c.64+11467T>C
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 1/21 chrX 21386428
chrX:21386611 A
A
 T
T
 2 a0001c0001t0002g0125
a0001c0001t0002g0126
a0001c0001t0002g0125
a0001c0001t0002g0126
 2 NA18943.hp1
NA19091.hp1
NA18943.hp1
NA19091.hp1
 intron_variant MODIFIER c.64+11650A>T
c.64+11650A>T
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 1/21 chrX 21386611
chrX:21386713 A
A
 G
G
 1 a0001c0001t0008g0124
a0001c0001t0008g0124
 1 NA19012.hp1
NA19012.hp1
 intron_variant MODIFIER c.64+11752A>G
c.64+11752A>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 1/21 chrX 21386713
chrX:21386845 A
A
 G
G
 2 a0001c0001t0023g0006
a0001c0001t0043g0007
a0001c0001t0023g0006
a0001c0001t0043g0007
 2 HG03491.hp2
HG03654.hp1
HG03491.hp2
HG03654.hp1
 intron_variant MODIFIER c.64+11884A>G
c.64+11884A>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 1/21 chrX 21386845
chrX:21387080 T
T
 C
C
 2 a0001c0001t0007g0140
a0001c0001t0020g0141
a0001c0001t0007g0140
a0001c0001t0020g0141
 2 HG01243.hp1
HG02922.hp1
HG01243.hp1
HG02922.hp1
 intron_variant MODIFIER c.64+12119T>C
c.64+12119T>C
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 1/21 chrX 21387080
chrX:21387855 C
C
 T
T
 2 a0001c0001t0002g0125
a0001c0001t0002g0126
a0001c0001t0002g0125
a0001c0001t0002g0126
 2 NA18943.hp1
NA19091.hp1
NA18943.hp1
NA19091.hp1
 intron_variant MODIFIER c.64+12894C>T
c.64+12894C>T
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 1/21 chrX 21387855
chrX:21387990 C
C
 A
A
 1 a0001c0001t0017g0018
a0001c0001t0017g0018
 1 HG01071.hp2
HG01071.hp2
 intron_variant MODIFIER c.64+13029C>A
c.64+13029C>A
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 1/21 chrX 21387990
chrX:21388086 A
A
 G
G
 1 a0001c0001t0018g0123
a0001c0001t0018g0123
 1 HG01358.hp1
HG01358.hp1
 intron_variant MODIFIER c.64+13125A>G
c.64+13125A>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 1/21 chrX 21388086
chrX:21388338 A
A
 G
G
 3 a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
 3 HG02615.hp1
HG02965.hp1
HG03471.hp1
HG02615.hp1
HG02965.hp1
HG03471.hp1
 intron_variant MODIFIER c.64+13377A>G
c.64+13377A>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 1/21 chrX 21388338
chrX:21388979 T
T
 C
C
 1 a0001c0001t0007g0140
a0001c0001t0007g0140
 1 HG02922.hp1
HG02922.hp1
 intron_variant MODIFIER c.64+14018T>C
c.64+14018T>C
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 1/21 chrX 21388979
chrX:21389119 C
C
 T
T
 13 a0001c0001t0001g0158
a0001c0001t0006g0155
a0001c0001t0006g0157
others(10): Show 
a0001c0001t0001g0158
a0001c0001t0006g0155
a0001c0001t0006g0157
a0001c0001t0006g0159
a0001c0001t0006g0160
a0001c0001t0006g0161
a0001c0001t0010g0152
a0001c0001t0010g0153
a0001c0001t0010g0162
a0001c0001t0023g0006
a0001c0001t0024g0156
a0001c0001t0043g0007
a0003c0004t0006g0154
 13 HG01884.hp1
HG02615.hp2
HG02886.hp1
others(10): Show 
HG01884.hp1
HG02615.hp2
HG02886.hp1
HG02922.hp2
HG02976.hp1
HG03130.hp1
HG03209.hp1
HG03225.hp1
HG03491.hp2
HG03516.hp1
HG03654.hp1
NA19240.hp2
NA20300.hp2
 intron_variant MODIFIER c.64+14158C>T
c.64+14158C>T
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 1/21 chrX 21389119
chrX:21389120 G
G
 A
A
 1 a0001c0001t0002g0047
a0001c0001t0002g0047
 1 NA19076.hp1
NA19076.hp1
 intron_variant MODIFIER c.64+14159G>A
c.64+14159G>A
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 1/21 chrX 21389120
chrX:21389258 C
C
 T
T
 8 a0001c0001t0002g0046
a0001c0001t0002g0118
a0001c0001t0002g0119
others(5): Show 
a0001c0001t0002g0046
a0001c0001t0002g0118
a0001c0001t0002g0119
a0001c0001t0002g0120
a0001c0001t0002g0121
a0001c0001t0002g0122
a0001c0001t0008g0143
a0001c0001t0039g0144
 8 HG02083.hp1
NA18612.hp1
NA18966.hp1
others(5): Show 
HG02083.hp1
NA18612.hp1
NA18966.hp1
NA18986.hp1
NA18990.hp1
NA19055.hp1
NA19070.hp1
NA19086.hp1
 intron_variant MODIFIER c.64+14297C>T
c.64+14297C>T
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 1/21 chrX 21389258
chrX:21389721 A
A
 G
G
 2 a0001c0001t0003g0116
a0001c0001t0004g0117
a0001c0001t0003g0116
a0001c0001t0004g0117
 2 HG02015.hp1
HG03017.hp1
HG02015.hp1
HG03017.hp1
 intron_variant MODIFIER c.64+14760A>G
c.64+14760A>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 1/21 chrX 21389721
chrX:21390356 A
A
 G
G
 1 a0001c0001t0043g0007
a0001c0001t0043g0007
 1 HG03491.hp2
HG03491.hp2
 intron_variant MODIFIER c.64+15395A>G
c.64+15395A>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 1/21 chrX 21390356
chrX:21390535 A
A
 G
G
 3 a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
 3 HG02615.hp1
HG02965.hp1
HG03471.hp1
HG02615.hp1
HG02965.hp1
HG03471.hp1
 intron_variant MODIFIER c.64+15574A>G
c.64+15574A>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 1/21 chrX 21390535
chrX:21390688 C
C
 T
T
 1 a0001c0001t0012g0045
a0001c0001t0012g0045
 1 HG02145.hp1
HG02145.hp1
 intron_variant MODIFIER c.64+15727C>T
c.64+15727C>T
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 1/21 chrX 21390688
chrX:21391166 A
A
 G
G
 1 a0001c0001t0003g0151
a0001c0001t0003g0151
 1 HG01081.hp2
HG01081.hp2
 intron_variant MODIFIER c.64+16205A>G
c.64+16205A>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 1/21 chrX 21391166
chrX:21391470 C
C
 G
G
 1 a0001c0001t0006g0161
a0001c0001t0006g0161
 1 HG02976.hp1
HG02976.hp1
 intron_variant MODIFIER c.64+16509C>G
c.64+16509C>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 1/21 chrX 21391470
chrX:21391479 T
T
 G
G
 3 a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
 3 HG02615.hp1
HG02965.hp1
HG03471.hp1
HG02615.hp1
HG02965.hp1
HG03471.hp1
 intron_variant MODIFIER c.64+16518T>G
c.64+16518T>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 1/21 chrX 21391479
chrX:21391533 G
G
 T
T
 4 a0001c0001t0003g0015
a0001c0001t0011g0016
a0001c0001t0011g0017
others(1): Show 
a0001c0001t0003g0015
a0001c0001t0011g0016
a0001c0001t0011g0017
a0001c0001t0011g0138
 4 HG02717.hp1
HG03041.hp1
HG03579.hp1
others(1): Show 
HG02717.hp1
HG03041.hp1
HG03579.hp1
NA18522.hp1
 intron_variant MODIFIER c.64+16572G>T
c.64+16572G>T
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 1/21 chrX 21391533
chrX:21391632 C
C
 G
G
 3 a0001c0001t0010g0152
a0001c0001t0010g0153
a0001c0001t0010g0162
a0001c0001t0010g0152
a0001c0001t0010g0153
a0001c0001t0010g0162
 3 HG03209.hp1
HG03225.hp1
NA19240.hp2
HG03209.hp1
HG03225.hp1
NA19240.hp2
 intron_variant MODIFIER c.64+16671C>G
c.64+16671C>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 1/21 chrX 21391632
chrX:21391713 C
C
 T
T
 1 a0001c0001t0041g0009
a0001c0001t0041g0009
 1 HG03098.hp1
HG03098.hp1
 intron_variant MODIFIER c.64+16752C>T
c.64+16752C>T
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 1/21 chrX 21391713
chrX:21391884 C
C
 T
T
 1 a0001c0001t0002g0115
a0001c0001t0002g0115
 1 NA18974.hp1
NA18974.hp1
 intron_variant MODIFIER c.64+16923C>T
c.64+16923C>T
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 1/21 chrX 21391884
chrX:21392162 G
G
 GT
GT
 15 a0001c0001t0003g0015
a0001c0001t0009g0010
a0001c0001t0009g0011
others(12): Show 
a0001c0001t0003g0015
a0001c0001t0009g0010
a0001c0001t0009g0011
a0001c0001t0009g0012
a0001c0001t0009g0013
a0001c0001t0011g0016
a0001c0001t0011g0017
a0001c0001t0011g0138
a0001c0001t0017g0018
a0001c0001t0019g0014
a0001c0001t0041g0009
a0001c0001t0042g0008
a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
 15 HG01071.hp2
HG01884.hp2
HG02280.hp2
others(12): Show 
HG01071.hp2
HG01884.hp2
HG02280.hp2
HG02572.hp1
HG02615.hp1
HG02647.hp1
HG02717.hp1
HG02809.hp1
HG02965.hp1
HG03041.hp1
HG03098.hp1
HG03471.hp1
HG03486.hp1
HG03579.hp1
NA18522.hp1
 intron_variant MODIFIER c.64+17202dupT
c.64+17202dupT
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 1/21 INFO_REALIGN_3_PRIME chrX 21392162
chrX:21392426 G
G
 A
A
 3 a0001c0001t0003g0015
a0001c0001t0011g0016
a0001c0001t0011g0138
a0001c0001t0003g0015
a0001c0001t0011g0016
a0001c0001t0011g0138
 3 HG02717.hp1
HG03041.hp1
NA18522.hp1
HG02717.hp1
HG03041.hp1
NA18522.hp1
 intron_variant MODIFIER c.64+17465G>A
c.64+17465G>A
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 1/21 chrX 21392426
chrX:21392481 T
T
 A
A
 15 a0001c0001t0003g0015
a0001c0001t0009g0010
a0001c0001t0009g0011
others(12): Show 
a0001c0001t0003g0015
a0001c0001t0009g0010
a0001c0001t0009g0011
a0001c0001t0009g0012
a0001c0001t0009g0013
a0001c0001t0011g0016
a0001c0001t0011g0017
a0001c0001t0011g0138
a0001c0001t0017g0018
a0001c0001t0019g0014
a0001c0001t0041g0009
a0001c0001t0042g0008
a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
 15 HG01071.hp2
HG01884.hp2
HG02280.hp2
others(12): Show 
HG01071.hp2
HG01884.hp2
HG02280.hp2
HG02572.hp1
HG02615.hp1
HG02647.hp1
HG02717.hp1
HG02809.hp1
HG02965.hp1
HG03041.hp1
HG03098.hp1
HG03471.hp1
HG03486.hp1
HG03579.hp1
NA18522.hp1
 intron_variant MODIFIER c.64+17520T>A
c.64+17520T>A
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 1/21 chrX 21392481
chrX:21392949 TC
TC
 T
T
 3 a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
 3 HG02615.hp1
HG02965.hp1
HG03471.hp1
HG02615.hp1
HG02965.hp1
HG03471.hp1
 intron_variant MODIFIER c.64+17990delC
c.64+17990delC
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 1/21 INFO_REALIGN_3_PRIME chrX 21392949
chrX:21392968 T
T
 C
C
 12 a0001c0001t0003g0015
a0001c0001t0009g0010
a0001c0001t0009g0011
others(9): Show 
a0001c0001t0003g0015
a0001c0001t0009g0010
a0001c0001t0009g0011
a0001c0001t0009g0012
a0001c0001t0009g0013
a0001c0001t0011g0016
a0001c0001t0011g0017
a0001c0001t0011g0138
a0001c0001t0017g0018
a0001c0001t0019g0014
a0001c0001t0041g0009
a0001c0001t0042g0008
 12 HG01071.hp2
HG01884.hp2
HG02280.hp2
others(9): Show 
HG01071.hp2
HG01884.hp2
HG02280.hp2
HG02572.hp1
HG02647.hp1
HG02717.hp1
HG02809.hp1
HG03041.hp1
HG03098.hp1
HG03486.hp1
HG03579.hp1
NA18522.hp1
 intron_variant MODIFIER c.64+18007T>C
c.64+18007T>C
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 1/21 chrX 21392968
chrX:21393074 T
T
 G
G
 1 a0001c0001t0001g0048
a0001c0001t0001g0048
 1 HG00673.hp1
HG00673.hp1
 intron_variant MODIFIER c.64+18113T>G
c.64+18113T>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 1/21 chrX 21393074
chrX:21393293 C
C
 T
T
 1 a0002c0005t0003g0030
a0002c0005t0003g0030
 1 HG02886.hp2
HG02886.hp2
 intron_variant MODIFIER c.64+18332C>T
c.64+18332C>T
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 1/21 chrX 21393293
chrX:21393507 C
C
 A
A
 1 a0001c0001t0004g0020
a0001c0001t0004g0020
 1 HG01192.hp1
HG01192.hp1
 intron_variant MODIFIER c.64+18546C>A
c.64+18546C>A
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 1/21 chrX 21393507
chrX:21393876 T
T
 C
C
 5 a0001c0001t0009g0010
a0001c0001t0009g0011
a0001c0001t0009g0012
others(2): Show 
a0001c0001t0009g0010
a0001c0001t0009g0011
a0001c0001t0009g0012
a0001c0001t0009g0013
a0001c0001t0041g0009
 5 HG02280.hp2
HG02572.hp1
HG02809.hp1
others(2): Show 
HG02280.hp2
HG02572.hp1
HG02809.hp1
HG03098.hp1
HG03486.hp1
 intron_variant MODIFIER c.64+18915T>C
c.64+18915T>C
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 1/21 chrX 21393876
chrX:21394370 G
G
 A
A
 4 a0001c0001t0002g0047
a0001c0001t0002g0049
a0001c0001t0002g0050
others(1): Show 
a0001c0001t0002g0047
a0001c0001t0002g0049
a0001c0001t0002g0050
a0001c0001t0008g0135
 4 NA18944.hp1
NA19000.hp1
NA19004.hp1
others(1): Show 
NA18944.hp1
NA19000.hp1
NA19004.hp1
NA19076.hp1
 intron_variant MODIFIER c.64+19409G>A
c.64+19409G>A
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 1/21 chrX 21394370
chrX:21394427 C
C
 G
G
 1 a0001c0001t0020g0141
a0001c0001t0020g0141
 1 HG01243.hp1
HG01243.hp1
 intron_variant MODIFIER c.64+19466C>G
c.64+19466C>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 1/21 chrX 21394427
chrX:21394594 G
G
 C
C
 15 a0001c0001t0003g0015
a0001c0001t0009g0010
a0001c0001t0009g0011
others(12): Show 
a0001c0001t0003g0015
a0001c0001t0009g0010
a0001c0001t0009g0011
a0001c0001t0009g0012
a0001c0001t0009g0013
a0001c0001t0011g0016
a0001c0001t0011g0017
a0001c0001t0011g0138
a0001c0001t0017g0018
a0001c0001t0019g0014
a0001c0001t0041g0009
a0001c0001t0042g0008
a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
 15 HG01071.hp2
HG01884.hp2
HG02280.hp2
others(12): Show 
HG01071.hp2
HG01884.hp2
HG02280.hp2
HG02572.hp1
HG02615.hp1
HG02647.hp1
HG02717.hp1
HG02809.hp1
HG02965.hp1
HG03041.hp1
HG03098.hp1
HG03471.hp1
HG03486.hp1
HG03579.hp1
NA18522.hp1
 intron_variant MODIFIER c.64+19633G>C
c.64+19633G>C
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 1/21 chrX 21394594
chrX:21394900 G
G
 T
T
 69 a0001c0001t0001g0158
a0001c0001t0002g0003
a0001c0001t0002g0004
others(66): Show 
a0001c0001t0001g0158
a0001c0001t0002g0003
a0001c0001t0002g0004
a0001c0001t0002g0019
a0001c0001t0002g0028
a0001c0001t0002g0046
a0001c0001t0002g0047
a0001c0001t0002g0049
a0001c0001t0002g0050
a0001c0001t0002g0110
a0001c0001t0002g0111
a0001c0001t0002g0112
a0001c0001t0002g0113
a0001c0001t0002g0114
a0001c0001t0002g0118
a0001c0001t0002g0119
a0001c0001t0002g0120
a0001c0001t0002g0121
a0001c0001t0002g0122
a0001c0001t0002g0125
a0001c0001t0002g0126
a0001c0001t0003g0015
a0001c0001t0003g0024
a0001c0001t0003g0029
a0001c0001t0003g0031
a0001c0001t0003g0151
a0001c0001t0006g0155
a0001c0001t0006g0157
a0001c0001t0006g0159
a0001c0001t0006g0160
a0001c0001t0006g0161
a0001c0001t0007g0140
a0001c0001t0008g0005
a0001c0001t0008g0124
a0001c0001t0008g0135
a0001c0001t0008g0143
a0001c0001t0009g0010
a0001c0001t0009g0011
a0001c0001t0009g0012
a0001c0001t0009g0013
a0001c0001t0010g0152
a0001c0001t0010g0153
a0001c0001t0010g0162
a0001c0001t0011g0016
a0001c0001t0011g0017
a0001c0001t0011g0138
a0001c0001t0012g0025
a0001c0001t0012g0045
a0001c0001t0012g0142
a0001c0001t0017g0018
a0001c0001t0017g0146
a0001c0001t0019g0014
a0001c0001t0020g0141
a0001c0001t0022g0033
a0001c0001t0023g0006
a0001c0001t0024g0156
a0001c0001t0027g0034
a0001c0001t0038g0150
a0001c0001t0039g0144
a0001c0001t0040g0027
a0001c0001t0041g0009
a0001c0001t0042g0008
a0001c0001t0043g0007
a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
a0001c0007t0036g0026
a0002c0005t0003g0030
a0003c0004t0006g0154
 69 HG00140.hp1
HG00621.hp1
HG00735.hp1
others(66): Show 
HG00140.hp1
HG00621.hp1
HG00735.hp1
HG00741.hp2
HG01069.hp1
HG01071.hp1
HG01071.hp2
HG01081.hp1
HG01081.hp2
HG01106.hp1
HG01109.hp1
HG01243.hp1
HG01433.hp1
HG01884.hp1
HG01884.hp2
HG02055.hp1
HG02074.hp1
HG02083.hp1
HG02145.hp1
HG02258.hp1
HG02280.hp1
HG02280.hp2
HG02486.hp1
HG02572.hp1
HG02615.hp1
HG02615.hp2
HG02647.hp1
HG02717.hp1
HG02809.hp1
HG02886.hp1
HG02886.hp2
HG02895.hp1
HG02922.hp1
HG02922.hp2
HG02965.hp1
HG02976.hp1
HG02976.hp2
HG03041.hp1
HG03098.hp1
HG03130.hp1
HG03139.hp1
HG03209.hp1
HG03225.hp1
HG03471.hp1
HG03486.hp1
HG03486.hp2
HG03491.hp2
HG03516.hp1
HG03579.hp1
HG03654.hp1
NA18522.hp1
NA18612.hp1
NA18943.hp1
NA18944.hp1
NA18966.hp1
NA18986.hp1
NA18990.hp1
NA19000.hp1
NA19004.hp1
NA19012.hp1
NA19043.hp1
NA19055.hp1
NA19070.hp1
NA19076.hp1
NA19086.hp1
NA19091.hp1
NA19240.hp1
NA19240.hp2
NA20300.hp2
 intron_variant MODIFIER c.64+19939G>T
c.64+19939G>T
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 1/21 chrX 21394900
chrX:21395319 A
A
 G
G
 1 a0001c0001t0003g0044
a0001c0001t0003g0044
 1 HG03942.hp1
HG03942.hp1
 intron_variant MODIFIER c.64+20358A>G
c.64+20358A>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 1/21 chrX 21395319
chrX:21395413 G
G
 A
A
 1 a0001c0001t0001g0051
a0001c0001t0001g0051
 1 HG01074.hp1
HG01074.hp1
 intron_variant MODIFIER c.64+20452G>A
c.64+20452G>A
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 1/21 chrX 21395413
chrX:21396442 A
A
 T
T
 3 a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
 3 HG02615.hp1
HG02965.hp1
HG03471.hp1
HG02615.hp1
HG02965.hp1
HG03471.hp1
 intron_variant MODIFIER c.64+21481A>T
c.64+21481A>T
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 1/21 chrX 21396442
chrX:21396457 A
A
 C
C
 1 a0001c0001t0002g0043
a0001c0001t0002g0043
 1 HG02809.hp2
HG02809.hp2
 intron_variant MODIFIER c.64+21496A>C
c.64+21496A>C
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 1/21 chrX 21396457
chrX:21396577 C
C
 T
T
 1 a0001c0001t0001g0109
a0001c0001t0001g0109
 1 HG02738.hp1
HG02738.hp1
 intron_variant MODIFIER c.64+21616C>T
c.64+21616C>T
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 1/21 chrX 21396577
chrX:21398302 C
C
 T
T
 1 a0001c0001t0007g0140
a0001c0001t0007g0140
 1 HG02922.hp1
HG02922.hp1
 intron_variant MODIFIER c.64+23341C>T
c.64+23341C>T
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 1/21 chrX 21398302
chrX:21398340 A
A
 G
G
 8 a0001c0002t0001g0042
a0001c0002t0001g0104
a0001c0002t0001g0105
others(5): Show 
a0001c0002t0001g0042
a0001c0002t0001g0104
a0001c0002t0001g0105
a0001c0002t0001g0107
a0001c0002t0001g0108
a0001c0002t0005g0106
a0001c0002t0007g0040
a0001c0002t0007g0041
 8 HG01934.hp1
HG01943.hp1
HG02027.hp1
others(5): Show 
HG01934.hp1
HG01943.hp1
HG02027.hp1
HG02129.hp1
NA18977.hp1
NA18984.hp1
NA19056.hp1
NA19079.hp1
 intron_variant MODIFIER c.64+23379A>G
c.64+23379A>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 1/21 chrX 21398340
chrX:21398390 T
T
 C
C
 2 a0001c0001t0006g0155
a0003c0004t0006g0154
a0001c0001t0006g0155
a0003c0004t0006g0154
 2 HG01884.hp1
HG02922.hp2
HG01884.hp1
HG02922.hp2
 intron_variant MODIFIER c.64+23429T>C
c.64+23429T>C
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 1/21 chrX 21398390
chrX:21398498 T
T
 C
C
 2 a0001c0001t0007g0140
a0001c0001t0020g0141
a0001c0001t0007g0140
a0001c0001t0020g0141
 2 HG01243.hp1
HG02922.hp1
HG01243.hp1
HG02922.hp1
 intron_variant MODIFIER c.64+23537T>C
c.64+23537T>C
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 1/21 chrX 21398498
chrX:21399197 A
A
 G
G
 3 a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
 3 HG02615.hp1
HG02965.hp1
HG03471.hp1
HG02615.hp1
HG02965.hp1
HG03471.hp1
 intron_variant MODIFIER c.64+24236A>G
c.64+24236A>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 1/21 chrX 21399197
chrX:21399551 G
G
 A
A
 3 a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
 3 HG02615.hp1
HG02965.hp1
HG03471.hp1
HG02615.hp1
HG02965.hp1
HG03471.hp1
 intron_variant MODIFIER c.64+24590G>A
c.64+24590G>A
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 1/21 chrX 21399551
chrX:21399632 T
T
 G
G
 3 a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
 3 HG02615.hp1
HG02965.hp1
HG03471.hp1
HG02615.hp1
HG02965.hp1
HG03471.hp1
 intron_variant MODIFIER c.64+24671T>G
c.64+24671T>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 1/21 chrX 21399632
chrX:21399648 A
A
 G
G
 15 a0001c0001t0003g0015
a0001c0001t0009g0010
a0001c0001t0009g0011
others(12): Show 
a0001c0001t0003g0015
a0001c0001t0009g0010
a0001c0001t0009g0011
a0001c0001t0009g0012
a0001c0001t0009g0013
a0001c0001t0011g0016
a0001c0001t0011g0017
a0001c0001t0011g0138
a0001c0001t0017g0018
a0001c0001t0019g0014
a0001c0001t0041g0009
a0001c0001t0042g0008
a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
 15 HG01071.hp2
HG01884.hp2
HG02280.hp2
others(12): Show 
HG01071.hp2
HG01884.hp2
HG02280.hp2
HG02572.hp1
HG02615.hp1
HG02647.hp1
HG02717.hp1
HG02809.hp1
HG02965.hp1
HG03041.hp1
HG03098.hp1
HG03471.hp1
HG03486.hp1
HG03579.hp1
NA18522.hp1
 intron_variant MODIFIER c.64+24687A>G
c.64+24687A>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 1/21 chrX 21399648
chrX:21399685 T
T
 C
C
 12 a0001c0001t0003g0015
a0001c0001t0009g0010
a0001c0001t0009g0011
others(9): Show 
a0001c0001t0003g0015
a0001c0001t0009g0010
a0001c0001t0009g0011
a0001c0001t0009g0012
a0001c0001t0009g0013
a0001c0001t0011g0016
a0001c0001t0011g0017
a0001c0001t0011g0138
a0001c0001t0017g0018
a0001c0001t0019g0014
a0001c0001t0041g0009
a0001c0001t0042g0008
 12 HG01071.hp2
HG01884.hp2
HG02280.hp2
others(9): Show 
HG01071.hp2
HG01884.hp2
HG02280.hp2
HG02572.hp1
HG02647.hp1
HG02717.hp1
HG02809.hp1
HG03041.hp1
HG03098.hp1
HG03486.hp1
HG03579.hp1
NA18522.hp1
 intron_variant MODIFIER c.64+24724T>C
c.64+24724T>C
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 1/21 chrX 21399685
chrX:21399752 C
C
 T
T
 2 a0001c0001t0023g0006
a0001c0001t0043g0007
a0001c0001t0023g0006
a0001c0001t0043g0007
 2 HG03491.hp2
HG03654.hp1
HG03491.hp2
HG03654.hp1
 intron_variant MODIFIER c.64+24791C>T
c.64+24791C>T
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 1/21 chrX 21399752
chrX:21399983 T
T
 C
C
 1 a0001c0001t0002g0125
a0001c0001t0002g0125
 1 NA19091.hp1
NA19091.hp1
 intron_variant MODIFIER c.64+25022T>C
c.64+25022T>C
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 1/21 chrX 21399983
chrX:21400142 A
A
 G
G
 2 a0001c0001t0022g0033
a0001c0001t0027g0034
a0001c0001t0022g0033
a0001c0001t0027g0034
 2 HG02055.hp1
HG02486.hp1
HG02055.hp1
HG02486.hp1
 intron_variant MODIFIER c.64+25181A>G
c.64+25181A>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 1/21 chrX 21400142
chrX:21400469 A
A
 G
G
 2 a0001c0001t0001g0102
a0001c0001t0001g0103
a0001c0001t0001g0102
a0001c0001t0001g0103
 2 HG03491.hp1
HG03492.hp1
HG03491.hp1
HG03492.hp1
 intron_variant MODIFIER c.64+25508A>G
c.64+25508A>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 1/21 chrX 21400469
chrX:21400553 T
T
 C
C
 41 a0001c0001t0001g0158
a0001c0001t0002g0028
a0001c0001t0003g0015
others(38): Show 
a0001c0001t0001g0158
a0001c0001t0002g0028
a0001c0001t0003g0015
a0001c0001t0003g0024
a0001c0001t0003g0029
a0001c0001t0003g0151
a0001c0001t0006g0155
a0001c0001t0006g0157
a0001c0001t0006g0159
a0001c0001t0006g0160
a0001c0001t0006g0161
a0001c0001t0007g0140
a0001c0001t0009g0010
a0001c0001t0009g0011
a0001c0001t0009g0012
a0001c0001t0009g0013
a0001c0001t0010g0152
a0001c0001t0010g0153
a0001c0001t0010g0162
a0001c0001t0011g0016
a0001c0001t0011g0017
a0001c0001t0011g0138
a0001c0001t0012g0025
a0001c0001t0017g0018
a0001c0001t0017g0146
a0001c0001t0019g0014
a0001c0001t0020g0141
a0001c0001t0022g0033
a0001c0001t0023g0006
a0001c0001t0024g0156
a0001c0001t0027g0034
a0001c0001t0038g0150
a0001c0001t0040g0027
a0001c0001t0041g0009
a0001c0001t0042g0008
a0001c0001t0043g0007
a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
a0001c0007t0036g0026
a0003c0004t0006g0154
 41 HG01071.hp2
HG01081.hp1
HG01081.hp2
others(38): Show 
HG01071.hp2
HG01081.hp1
HG01081.hp2
HG01109.hp1
HG01243.hp1
HG01884.hp1
HG01884.hp2
HG02055.hp1
HG02258.hp1
HG02280.hp1
HG02280.hp2
HG02486.hp1
HG02572.hp1
HG02615.hp1
HG02615.hp2
HG02647.hp1
HG02717.hp1
HG02809.hp1
HG02886.hp1
HG02895.hp1
HG02922.hp1
HG02922.hp2
HG02965.hp1
HG02976.hp1
HG03041.hp1
HG03098.hp1
HG03130.hp1
HG03209.hp1
HG03225.hp1
HG03471.hp1
HG03486.hp1
HG03486.hp2
HG03491.hp2
HG03516.hp1
HG03579.hp1
HG03654.hp1
NA18522.hp1
NA19043.hp1
NA19240.hp1
NA19240.hp2
NA20300.hp2
 intron_variant MODIFIER c.64+25592T>C
c.64+25592T>C
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 1/21 chrX 21400553
chrX:21400631 G
G
 A
A
 1 a0002c0005t0003g0030
a0002c0005t0003g0030
 1 HG02886.hp2
HG02886.hp2
 intron_variant MODIFIER c.64+25670G>A
c.64+25670G>A
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 1/21 chrX 21400631
chrX:21401316 C
C
 T
T
 1 a0001c0001t0001g0145
a0001c0001t0001g0145
 1 NA19082.hp1
NA19082.hp1
 intron_variant MODIFIER c.65-25181C>T
c.65-25181C>T
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 1/21 chrX 21401316
chrX:21401536 C
C
 T
T
 3 a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
 3 HG02615.hp1
HG02965.hp1
HG03471.hp1
HG02615.hp1
HG02965.hp1
HG03471.hp1
 intron_variant MODIFIER c.65-24961C>T
c.65-24961C>T
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 1/21 chrX 21401536
chrX:21401675 G
G
 A
A
 1 a0001c0001t0002g0118
a0001c0001t0002g0118
 1 NA19086.hp1
NA19086.hp1
 intron_variant MODIFIER c.65-24822G>A
c.65-24822G>A
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 1/21 chrX 21401675
chrX:21401840 G
G
 A
A
 2 a0001c0001t0001g0035
a0001c0001t0001g0052
a0001c0001t0001g0035
a0001c0001t0001g0052
 2 HG02056.hp1
NA19007.hp1
HG02056.hp1
NA19007.hp1
 intron_variant MODIFIER c.65-24657G>A
c.65-24657G>A
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 1/21 chrX 21401840
chrX:21401850 TTAAG
TTAAG
 T
T
 1 a0001c0001t0041g0009
a0001c0001t0041g0009
 1 HG03098.hp1
HG03098.hp1
 intron_variant MODIFIER c.65-24645_65-24642d
others(6): Show 
c.65-24645_65-24642delAAGT
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 1/21 INFO_REALIGN_3_PRIME chrX 21401850
chrX:21402190 A
A
 C
C
 1 a0001c0001t0011g0017
a0001c0001t0011g0017
 1 HG03579.hp1
HG03579.hp1
 intron_variant MODIFIER c.65-24307A>C
c.65-24307A>C
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 1/21 chrX 21402190
chrX:21402595 AAGAG
AAGAG
 A
A
 2 a0001c0001t0023g0006
a0001c0001t0043g0007
a0001c0001t0023g0006
a0001c0001t0043g0007
 2 HG03491.hp2
HG03654.hp1
HG03491.hp2
HG03654.hp1
 intron_variant MODIFIER c.65-23899_65-23896d
others(6): Show 
c.65-23899_65-23896delAGAG
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 1/21 INFO_REALIGN_3_PRIME chrX 21402595
chrX:21402614 A
A
 G
G
 1 a0001c0001t0019g0014
a0001c0001t0019g0014
 1 HG01884.hp2
HG01884.hp2
 intron_variant MODIFIER c.65-23883A>G
c.65-23883A>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 1/21 chrX 21402614
chrX:21402626 T
T
 G
G
 39 a0001c0001t0001g0158
a0001c0001t0002g0028
a0001c0001t0003g0015
others(36): Show 
a0001c0001t0001g0158
a0001c0001t0002g0028
a0001c0001t0003g0015
a0001c0001t0003g0024
a0001c0001t0003g0029
a0001c0001t0003g0151
a0001c0001t0006g0155
a0001c0001t0006g0157
a0001c0001t0006g0159
a0001c0001t0006g0160
a0001c0001t0006g0161
a0001c0001t0007g0140
a0001c0001t0009g0010
a0001c0001t0009g0011
a0001c0001t0009g0012
a0001c0001t0009g0013
a0001c0001t0010g0152
a0001c0001t0010g0153
a0001c0001t0010g0162
a0001c0001t0011g0016
a0001c0001t0011g0017
a0001c0001t0011g0138
a0001c0001t0012g0025
a0001c0001t0017g0018
a0001c0001t0017g0146
a0001c0001t0019g0014
a0001c0001t0020g0141
a0001c0001t0023g0006
a0001c0001t0024g0156
a0001c0001t0038g0150
a0001c0001t0040g0027
a0001c0001t0041g0009
a0001c0001t0042g0008
a0001c0001t0043g0007
a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
a0001c0007t0036g0026
a0003c0004t0006g0154
 39 HG01071.hp2
HG01081.hp1
HG01081.hp2
others(36): Show 
HG01071.hp2
HG01081.hp1
HG01081.hp2
HG01109.hp1
HG01243.hp1
HG01884.hp1
HG01884.hp2
HG02258.hp1
HG02280.hp1
HG02280.hp2
HG02572.hp1
HG02615.hp1
HG02615.hp2
HG02647.hp1
HG02717.hp1
HG02809.hp1
HG02886.hp1
HG02895.hp1
HG02922.hp1
HG02922.hp2
HG02965.hp1
HG02976.hp1
HG03041.hp1
HG03098.hp1
HG03130.hp1
HG03209.hp1
HG03225.hp1
HG03471.hp1
HG03486.hp1
HG03486.hp2
HG03491.hp2
HG03516.hp1
HG03579.hp1
HG03654.hp1
NA18522.hp1
NA19043.hp1
NA19240.hp1
NA19240.hp2
NA20300.hp2
 intron_variant MODIFIER c.65-23871T>G
c.65-23871T>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 1/21 chrX 21402626
chrX:21402693 A
A
 G
G
 1 a0001c0001t0003g0101
a0001c0001t0003g0101
 1 NA18995.hp1
NA18995.hp1
 intron_variant MODIFIER c.65-23804A>G
c.65-23804A>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 1/21 chrX 21402693
chrX:21403015 G
G
 T
T
 47 a0001c0001t0001g0158
a0001c0001t0002g0004
a0001c0001t0002g0019
others(44): Show 
a0001c0001t0001g0158
a0001c0001t0002g0004
a0001c0001t0002g0019
a0001c0001t0002g0028
a0001c0001t0003g0015
a0001c0001t0003g0024
a0001c0001t0003g0029
a0001c0001t0003g0031
a0001c0001t0003g0151
a0001c0001t0006g0155
a0001c0001t0006g0157
a0001c0001t0006g0159
a0001c0001t0006g0160
a0001c0001t0006g0161
a0001c0001t0007g0140
a0001c0001t0008g0005
a0001c0001t0009g0010
a0001c0001t0009g0011
a0001c0001t0009g0012
a0001c0001t0009g0013
a0001c0001t0010g0152
a0001c0001t0010g0153
a0001c0001t0010g0162
a0001c0001t0011g0016
a0001c0001t0011g0017
a0001c0001t0011g0138
a0001c0001t0012g0025
a0001c0001t0012g0045
a0001c0001t0017g0018
a0001c0001t0017g0146
a0001c0001t0019g0014
a0001c0001t0020g0141
a0001c0001t0022g0033
a0001c0001t0023g0006
a0001c0001t0024g0156
a0001c0001t0027g0034
a0001c0001t0038g0150
a0001c0001t0040g0027
a0001c0001t0041g0009
a0001c0001t0042g0008
a0001c0001t0043g0007
a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
a0001c0007t0036g0026
a0002c0005t0003g0030
a0003c0004t0006g0154
 47 HG01069.hp1
HG01071.hp1
HG01071.hp2
others(44): Show 
HG01069.hp1
HG01071.hp1
HG01071.hp2
HG01081.hp1
HG01081.hp2
HG01106.hp1
HG01109.hp1
HG01243.hp1
HG01884.hp1
HG01884.hp2
HG02055.hp1
HG02145.hp1
HG02258.hp1
HG02280.hp1
HG02280.hp2
HG02486.hp1
HG02572.hp1
HG02615.hp1
HG02615.hp2
HG02647.hp1
HG02717.hp1
HG02809.hp1
HG02886.hp1
HG02886.hp2
HG02895.hp1
HG02922.hp1
HG02922.hp2
HG02965.hp1
HG02976.hp1
HG02976.hp2
HG03041.hp1
HG03098.hp1
HG03130.hp1
HG03209.hp1
HG03225.hp1
HG03471.hp1
HG03486.hp1
HG03486.hp2
HG03491.hp2
HG03516.hp1
HG03579.hp1
HG03654.hp1
NA18522.hp1
NA19043.hp1
NA19240.hp1
NA19240.hp2
NA20300.hp2
 intron_variant MODIFIER c.65-23482G>T
c.65-23482G>T
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 1/21 chrX 21403015
chrX:21403057 G
G
 A
A
 12 a0001c0001t0001g0158
a0001c0001t0003g0151
a0001c0001t0006g0155
others(9): Show 
a0001c0001t0001g0158
a0001c0001t0003g0151
a0001c0001t0006g0155
a0001c0001t0006g0157
a0001c0001t0006g0159
a0001c0001t0006g0160
a0001c0001t0006g0161
a0001c0001t0010g0152
a0001c0001t0010g0153
a0001c0001t0010g0162
a0001c0001t0024g0156
a0003c0004t0006g0154
 12 HG01081.hp2
HG01884.hp1
HG02615.hp2
others(9): Show 
HG01081.hp2
HG01884.hp1
HG02615.hp2
HG02886.hp1
HG02922.hp2
HG02976.hp1
HG03130.hp1
HG03209.hp1
HG03225.hp1
HG03516.hp1
NA19240.hp2
NA20300.hp2
 intron_variant MODIFIER c.65-23440G>A
c.65-23440G>A
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 1/21 chrX 21403057
chrX:21403128 A
A
 G
G
 70 a0001c0001t0001g0158
a0001c0001t0002g0003
a0001c0001t0002g0004
others(67): Show 
a0001c0001t0001g0158
a0001c0001t0002g0003
a0001c0001t0002g0004
a0001c0001t0002g0019
a0001c0001t0002g0028
a0001c0001t0002g0043
a0001c0001t0002g0046
a0001c0001t0002g0047
a0001c0001t0002g0049
a0001c0001t0002g0050
a0001c0001t0002g0110
a0001c0001t0002g0111
a0001c0001t0002g0112
a0001c0001t0002g0113
a0001c0001t0002g0114
a0001c0001t0002g0118
a0001c0001t0002g0119
a0001c0001t0002g0120
a0001c0001t0002g0121
a0001c0001t0002g0122
a0001c0001t0002g0125
a0001c0001t0002g0126
a0001c0001t0003g0015
a0001c0001t0003g0024
a0001c0001t0003g0029
a0001c0001t0003g0031
a0001c0001t0003g0151
a0001c0001t0006g0155
a0001c0001t0006g0157
a0001c0001t0006g0159
a0001c0001t0006g0160
a0001c0001t0006g0161
a0001c0001t0007g0140
a0001c0001t0008g0005
a0001c0001t0008g0124
a0001c0001t0008g0135
a0001c0001t0008g0143
a0001c0001t0009g0010
a0001c0001t0009g0011
a0001c0001t0009g0012
a0001c0001t0009g0013
a0001c0001t0010g0152
a0001c0001t0010g0153
a0001c0001t0010g0162
a0001c0001t0011g0016
a0001c0001t0011g0017
a0001c0001t0011g0138
a0001c0001t0012g0025
a0001c0001t0012g0045
a0001c0001t0012g0142
a0001c0001t0017g0018
a0001c0001t0017g0146
a0001c0001t0019g0014
a0001c0001t0020g0141
a0001c0001t0022g0033
a0001c0001t0023g0006
a0001c0001t0024g0156
a0001c0001t0027g0034
a0001c0001t0038g0150
a0001c0001t0039g0144
a0001c0001t0040g0027
a0001c0001t0041g0009
a0001c0001t0042g0008
a0001c0001t0043g0007
a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
a0001c0007t0036g0026
a0002c0005t0003g0030
a0003c0004t0006g0154
 70 HG00140.hp1
HG00621.hp1
HG00735.hp1
others(67): Show 
HG00140.hp1
HG00621.hp1
HG00735.hp1
HG00741.hp2
HG01069.hp1
HG01071.hp1
HG01071.hp2
HG01081.hp1
HG01081.hp2
HG01106.hp1
HG01109.hp1
HG01243.hp1
HG01433.hp1
HG01884.hp1
HG01884.hp2
HG02055.hp1
HG02074.hp1
HG02083.hp1
HG02145.hp1
HG02258.hp1
HG02280.hp1
HG02280.hp2
HG02486.hp1
HG02572.hp1
HG02615.hp1
HG02615.hp2
HG02647.hp1
HG02717.hp1
HG02809.hp1
HG02809.hp2
HG02886.hp1
HG02886.hp2
HG02895.hp1
HG02922.hp1
HG02922.hp2
HG02965.hp1
HG02976.hp1
HG02976.hp2
HG03041.hp1
HG03098.hp1
HG03130.hp1
HG03139.hp1
HG03209.hp1
HG03225.hp1
HG03471.hp1
HG03486.hp1
HG03486.hp2
HG03491.hp2
HG03516.hp1
HG03579.hp1
HG03654.hp1
NA18522.hp1
NA18612.hp1
NA18943.hp1
NA18944.hp1
NA18966.hp1
NA18986.hp1
NA18990.hp1
NA19000.hp1
NA19004.hp1
NA19012.hp1
NA19043.hp1
NA19055.hp1
NA19070.hp1
NA19076.hp1
NA19086.hp1
NA19091.hp1
NA19240.hp1
NA19240.hp2
NA20300.hp2
 intron_variant MODIFIER c.65-23369A>G
c.65-23369A>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 1/21 chrX 21403128
chrX:21403543 T
T
 C
C
 2 a0001c0001t0022g0033
a0001c0001t0027g0034
a0001c0001t0022g0033
a0001c0001t0027g0034
 2 HG02055.hp1
HG02486.hp1
HG02055.hp1
HG02486.hp1
 intron_variant MODIFIER c.65-22954T>C
c.65-22954T>C
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 1/21 chrX 21403543
chrX:21403580 A
A
 G
G
 19 a0001c0001t0001g0158
a0001c0001t0002g0028
a0001c0001t0003g0024
others(16): Show 
a0001c0001t0001g0158
a0001c0001t0002g0028
a0001c0001t0003g0024
a0001c0001t0003g0029
a0001c0001t0006g0155
a0001c0001t0006g0157
a0001c0001t0006g0159
a0001c0001t0006g0160
a0001c0001t0006g0161
a0001c0001t0010g0152
a0001c0001t0010g0153
a0001c0001t0010g0162
a0001c0001t0012g0025
a0001c0001t0017g0146
a0001c0001t0024g0156
a0001c0001t0038g0150
a0001c0001t0040g0027
a0001c0007t0036g0026
a0003c0004t0006g0154
 19 HG01081.hp1
HG01109.hp1
HG01884.hp1
others(16): Show 
HG01081.hp1
HG01109.hp1
HG01884.hp1
HG02258.hp1
HG02280.hp1
HG02615.hp2
HG02886.hp1
HG02895.hp1
HG02922.hp2
HG02976.hp1
HG03130.hp1
HG03209.hp1
HG03225.hp1
HG03486.hp2
HG03516.hp1
NA19043.hp1
NA19240.hp1
NA19240.hp2
NA20300.hp2
 intron_variant MODIFIER c.65-22917A>G
c.65-22917A>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 1/21 chrX 21403580
chrX:21403850 T
T
 C
C
 1 a0001c0001t0001g0053
a0001c0001t0001g0053
 1 HG00280.hp1
HG00280.hp1
 intron_variant MODIFIER c.65-22647T>C
c.65-22647T>C
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 1/21 chrX 21403850
chrX:21403927 C
C
 T
T
 1 a0001c0001t0027g0034
a0001c0001t0027g0034
 1 HG02486.hp1
HG02486.hp1
 intron_variant MODIFIER c.65-22570C>T
c.65-22570C>T
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 1/21 chrX 21403927
chrX:21404789 C
C
 CA
CA
 23 a0001c0001t0001g0036
a0001c0001t0002g0028
a0001c0001t0002g0110
others(20): Show 
a0001c0001t0001g0036
a0001c0001t0002g0028
a0001c0001t0002g0110
a0001c0001t0002g0115
a0001c0001t0003g0024
a0001c0001t0004g0020
a0001c0001t0004g0021
a0001c0001t0004g0055
a0001c0001t0004g0056
a0001c0001t0004g0057
a0001c0001t0004g0129
a0001c0001t0007g0022
a0001c0001t0009g0010
a0001c0001t0009g0011
a0001c0001t0009g0012
a0001c0001t0009g0013
a0001c0001t0012g0025
a0001c0001t0017g0146
a0001c0001t0035g0054
a0001c0001t0040g0027
a0001c0001t0041g0009
a0001c0007t0036g0026
a0002c0005t0003g0030
 23 HG00609.hp1
HG00741.hp1
HG01081.hp1
others(20): Show 
HG00609.hp1
HG00741.hp1
HG01081.hp1
HG01109.hp1
HG01192.hp1
HG01256.hp1
HG01258.hp1
HG02074.hp1
HG02132.hp1
HG02258.hp1
HG02280.hp1
HG02280.hp2
HG02572.hp1
HG02809.hp1
HG02886.hp2
HG03098.hp1
HG03486.hp1
HG03486.hp2
HG04115.hp1
NA18967.hp1
NA18974.hp1
NA19043.hp1
homoSapiens_chm13v2.hp1
 intron_variant MODIFIER c.65-21685dupA
c.65-21685dupA
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 1/21 INFO_REALIGN_3_PRIME chrX 21404789
chrX:21404789 CA
CA
 C
C
 5 a0001c0001t0001g0137
a0001c0001t0002g0019
a0001c0001t0002g0047
others(2): Show 
a0001c0001t0001g0137
a0001c0001t0002g0019
a0001c0001t0002g0047
a0001c0001t0023g0006
a0001c0001t0043g0007
 5 HG01106.hp1
HG03490.hp1
HG03491.hp2
others(2): Show 
HG01106.hp1
HG03490.hp1
HG03491.hp2
HG03654.hp1
NA19076.hp1
 intron_variant MODIFIER c.65-21685delA
c.65-21685delA
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 1/21 INFO_REALIGN_3_PRIME chrX 21404789
chrX:21406148 G
G
 A
A
 1 a0001c0001t0001g0001
a0001c0001t0001g0001
 1 NA19068.hp1
NA19068.hp1
 intron_variant MODIFIER c.65-20349G>A
c.65-20349G>A
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 1/21 chrX 21406148
chrX:21406420 T
T
 C
C
 1 a0001c0001t0001g0058
a0001c0001t0001g0058
 1 HG02698.hp1
HG02698.hp1
 intron_variant MODIFIER c.65-20077T>C
c.65-20077T>C
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 1/21 chrX 21406420
chrX:21406815 G
G
 T
T
 1 a0001c0001t0002g0114
a0001c0001t0002g0114
 1 HG00140.hp1
HG00140.hp1
 intron_variant MODIFIER c.65-19682G>T
c.65-19682G>T
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 1/21 chrX 21406815
chrX:21407002 T
T
 C
C
 1 a0001c0001t0002g0019
a0001c0001t0002g0019
 1 HG01106.hp1
HG01106.hp1
 intron_variant MODIFIER c.65-19495T>C
c.65-19495T>C
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 1/21 chrX 21407002
chrX:21407528 C
C
 T
T
 1 a0001c0001t0002g0113
a0001c0001t0002g0113
 1 HG00735.hp1
HG00735.hp1
 intron_variant MODIFIER c.65-18969C>T
c.65-18969C>T
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 1/21 chrX 21407528
chrX:21407555 G
G
 A
A
 3 a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
 3 HG02615.hp1
HG02965.hp1
HG03471.hp1
HG02615.hp1
HG02965.hp1
HG03471.hp1
 intron_variant MODIFIER c.65-18942G>A
c.65-18942G>A
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 1/21 chrX 21407555
chrX:21407557 T
T
 A
A
 3 a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
 3 HG02615.hp1
HG02965.hp1
HG03471.hp1
HG02615.hp1
HG02965.hp1
HG03471.hp1
 intron_variant MODIFIER c.65-18940T>A
c.65-18940T>A
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 1/21 chrX 21407557
chrX:21407558 GT
GT
 G
G
 3 a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
 3 HG02615.hp1
HG02965.hp1
HG03471.hp1
HG02615.hp1
HG02965.hp1
HG03471.hp1
 intron_variant MODIFIER c.65-18934delT
c.65-18934delT
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 1/21 INFO_REALIGN_3_PRIME chrX 21407558
chrX:21407734 G
G
 A
A
 1 a0001c0001t0019g0014
a0001c0001t0019g0014
 1 HG01884.hp2
HG01884.hp2
 intron_variant MODIFIER c.65-18763G>A
c.65-18763G>A
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 1/21 chrX 21407734
chrX:21408471 A
A
 G
G
 159 a0001c0001t0001g0001
a0001c0001t0001g0035
a0001c0001t0001g0036
others(156): Show 
a0001c0001t0001g0001
a0001c0001t0001g0035
a0001c0001t0001g0036
a0001c0001t0001g0037
a0001c0001t0001g0039
a0001c0001t0001g0048
a0001c0001t0001g0052
a0001c0001t0001g0053
a0001c0001t0001g0058
a0001c0001t0001g0062
a0001c0001t0001g0067
a0001c0001t0001g0068
a0001c0001t0001g0069
a0001c0001t0001g0071
a0001c0001t0001g0073
a0001c0001t0001g0074
a0001c0001t0001g0075
a0001c0001t0001g0076
a0001c0001t0001g0077
a0001c0001t0001g0078
a0001c0001t0001g0080
a0001c0001t0001g0081
a0001c0001t0001g0082
a0001c0001t0001g0083
a0001c0001t0001g0084
a0001c0001t0001g0087
a0001c0001t0001g0089
a0001c0001t0001g0090
a0001c0001t0001g0093
a0001c0001t0001g0094
a0001c0001t0001g0096
a0001c0001t0001g0097
a0001c0001t0001g0102
a0001c0001t0001g0103
a0001c0001t0001g0109
a0001c0001t0001g0128
a0001c0001t0001g0131
a0001c0001t0001g0134
a0001c0001t0001g0137
a0001c0001t0001g0145
a0001c0001t0001g0158
a0001c0001t0002g0003
a0001c0001t0002g0004
a0001c0001t0002g0019
a0001c0001t0002g0028
a0001c0001t0002g0043
a0001c0001t0002g0046
a0001c0001t0002g0047
a0001c0001t0002g0049
a0001c0001t0002g0050
a0001c0001t0002g0110
a0001c0001t0002g0111
a0001c0001t0002g0112
a0001c0001t0002g0113
a0001c0001t0002g0114
a0001c0001t0002g0115
a0001c0001t0002g0118
a0001c0001t0002g0119
a0001c0001t0002g0120
a0001c0001t0002g0121
a0001c0001t0002g0122
a0001c0001t0002g0125
a0001c0001t0002g0126
a0001c0001t0003g0015
a0001c0001t0003g0024
a0001c0001t0003g0029
a0001c0001t0003g0031
a0001c0001t0003g0044
a0001c0001t0003g0061
a0001c0001t0003g0070
a0001c0001t0003g0101
a0001c0001t0003g0116
a0001c0001t0003g0133
a0001c0001t0003g0136
a0001c0001t0003g0151
a0001c0001t0004g0020
a0001c0001t0004g0021
a0001c0001t0004g0055
a0001c0001t0004g0056
a0001c0001t0004g0057
a0001c0001t0004g0064
a0001c0001t0004g0117
a0001c0001t0004g0129
a0001c0001t0004g0132
a0001c0001t0005g0063
a0001c0001t0005g0072
a0001c0001t0005g0079
a0001c0001t0005g0095
a0001c0001t0005g0099
a0001c0001t0006g0155
a0001c0001t0006g0157
a0001c0001t0006g0159
a0001c0001t0006g0160
a0001c0001t0006g0161
a0001c0001t0007g0022
a0001c0001t0007g0127
a0001c0001t0007g0140
a0001c0001t0008g0005
a0001c0001t0008g0124
a0001c0001t0008g0135
a0001c0001t0008g0143
a0001c0001t0009g0010
a0001c0001t0009g0011
a0001c0001t0009g0012
a0001c0001t0009g0013
a0001c0001t0010g0152
a0001c0001t0010g0153
a0001c0001t0010g0162
a0001c0001t0011g0016
a0001c0001t0011g0017
a0001c0001t0011g0138
a0001c0001t0012g0025
a0001c0001t0012g0045
a0001c0001t0012g0142
a0001c0001t0013g0066
a0001c0001t0013g0100
a0001c0001t0015g0038
a0001c0001t0015g0098
a0001c0001t0016g0032
a0001c0001t0016g0085
a0001c0001t0017g0018
a0001c0001t0017g0146
a0001c0001t0018g0123
a0001c0001t0019g0014
a0001c0001t0020g0141
a0001c0001t0021g0088
a0001c0001t0022g0033
a0001c0001t0023g0006
a0001c0001t0024g0156
a0001c0001t0025g0130
a0001c0001t0027g0034
a0001c0001t0029g0023
a0001c0001t0030g0086
a0001c0001t0031g0065
a0001c0001t0032g0163
a0001c0001t0033g0002
a0001c0001t0034g0091
a0001c0001t0035g0054
a0001c0001t0037g0092
a0001c0001t0038g0150
a0001c0001t0039g0144
a0001c0001t0040g0027
a0001c0001t0041g0009
a0001c0001t0042g0008
a0001c0001t0043g0007
a0001c0002t0001g0042
a0001c0002t0001g0104
a0001c0002t0001g0105
a0001c0002t0001g0107
a0001c0002t0001g0108
a0001c0002t0005g0106
a0001c0002t0007g0040
a0001c0002t0007g0041
a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
a0001c0007t0036g0026
a0002c0005t0003g0030
a0003c0004t0006g0154
 159 HG00140.hp1
HG00280.hp1
HG00609.hp1
others(156): Show 
HG00140.hp1
HG00280.hp1
HG00609.hp1
HG00621.hp1
HG00642.hp1
HG00673.hp1
HG00735.hp1
HG00735.hp2
HG00738.hp1
HG00741.hp1
HG00741.hp2
HG01069.hp1
HG01071.hp1
HG01071.hp2
HG01081.hp1
HG01081.hp2
HG01099.hp1
HG01106.hp1
HG01109.hp1
HG01167.hp1
HG01192.hp1
HG01243.hp1
HG01255.hp1
HG01256.hp1
HG01258.hp1
HG01261.hp1
HG01358.hp1
HG01433.hp1
HG01515.hp1
HG01884.hp1
HG01884.hp2
HG01928.hp1
HG01934.hp1
HG01943.hp1
HG01952.hp1
HG02015.hp1
HG02027.hp1
HG02040.hp1
HG02055.hp1
HG02056.hp1
HG02071.hp1
HG02074.hp1
HG02083.hp1
HG02129.hp1
HG02132.hp1
HG02135.hp1
HG02145.hp1
HG02258.hp1
HG02280.hp1
HG02280.hp2
HG02300.hp1
HG02486.hp1
HG02572.hp1
HG02602.hp1
HG02615.hp1
HG02615.hp2
HG02647.hp1
HG02698.hp1
HG02717.hp1
HG02735.hp1
HG02738.hp1
HG02809.hp1
HG02809.hp2
HG02886.hp1
HG02886.hp2
HG02895.hp1
HG02922.hp1
HG02922.hp2
HG02965.hp1
HG02976.hp1
HG02976.hp2
HG03017.hp1
HG03041.hp1
HG03098.hp1
HG03130.hp1
HG03139.hp1
HG03209.hp1
HG03225.hp1
HG03471.hp1
HG03486.hp1
HG03486.hp2
HG03490.hp1
HG03491.hp1
HG03491.hp2
HG03492.hp1
HG03516.hp1
HG03579.hp1
HG03654.hp1
HG03688.hp1
HG03710.hp1
HG03942.hp1
HG04115.hp1
HG04199.hp1
HG04204.hp1
HG04228.hp1
NA18522.hp1
NA18612.hp1
NA18747.hp1
NA18943.hp1
NA18944.hp1
NA18945.hp1
NA18948.hp1
NA18952.hp1
NA18953.hp1
NA18955.hp1
NA18959.hp1
NA18960.hp1
NA18961.hp1
NA18962.hp1
NA18965.hp1
NA18966.hp1
NA18967.hp1
NA18970.hp1
NA18971.hp1
NA18974.hp1
NA18977.hp1
NA18982.hp1
NA18983.hp1
NA18984.hp1
NA18986.hp1
NA18988.hp1
NA18989.hp1
NA18990.hp1
NA18994.hp1
NA18995.hp1
NA19000.hp1
NA19004.hp1
NA19005.hp1
NA19006.hp1
NA19007.hp1
NA19009.hp1
NA19012.hp1
NA19043.hp1
NA19055.hp1
NA19056.hp1
NA19058.hp1
NA19060.hp1
NA19062.hp1
NA19063.hp1
NA19066.hp1
NA19068.hp1
NA19070.hp1
NA19072.hp1
NA19076.hp1
NA19079.hp1
NA19082.hp1
NA19085.hp1
NA19086.hp1
NA19088.hp1
NA19089.hp1
NA19091.hp1
NA19240.hp1
NA19240.hp2
NA20300.hp1
NA20300.hp2
NA20752.hp1
NA20805.hp1
NA20905.hp1
homoSapiens_chm13v2.hp1
 intron_variant MODIFIER c.65-18026A>G
c.65-18026A>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 1/21 chrX 21408471
chrX:21408759 G
G
 GT
GT
 2 a0001c0001t0001g0060
a0001c0006t0028g0059
a0001c0001t0001g0060
a0001c0006t0028g0059
 2 HG03041.hp2
HG03516.hp2
HG03041.hp2
HG03516.hp2
 intron_variant MODIFIER c.65-17729dupT
c.65-17729dupT
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 1/21 INFO_REALIGN_3_PRIME chrX 21408759
chrX:21408965 A
A
 T
T
 1 a0001c0001t0043g0007
a0001c0001t0043g0007
 1 HG03491.hp2
HG03491.hp2
 intron_variant MODIFIER c.65-17532A>T
c.65-17532A>T
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 1/21 chrX 21408965
chrX:21409107 T
T
 C
C
 1 a0001c0001t0003g0061
a0001c0001t0003g0061
 1 NA18970.hp1
NA18970.hp1
 intron_variant MODIFIER c.65-17390T>C
c.65-17390T>C
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 1/21 chrX 21409107
chrX:21409226 AATTATAT
others(4): Show 
AATTATATATAT
 A
A
 1 a0001c0001t0038g0150
a0001c0001t0038g0150
 1 NA19240.hp1
NA19240.hp1
 intron_variant MODIFIER c.65-17268_65-17258d
others(13): Show 
c.65-17268_65-17258delTATATATATAT
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 1/21 INFO_REALIGN_3_PRIME chrX 21409226
chrX:21409228 T
T
 TTA
TTA
 1 a0001c0001t0001g0062
a0001c0001t0001g0062
 1 NA18988.hp1
NA18988.hp1
 intron_variant MODIFIER c.65-17219_65-17218d
others(4): Show 
c.65-17219_65-17218dupAT
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 1/21 INFO_REALIGN_3_PRIME chrX 21409228
chrX:21409228 T
T
 TTATATA
TTATATA
 3 a0001c0001t0002g0003
a0001c0001t0022g0033
a0001c0001t0043g0007
a0001c0001t0002g0003
a0001c0001t0022g0033
a0001c0001t0043g0007
 3 HG00621.hp1
HG02055.hp1
HG03491.hp2
HG00621.hp1
HG02055.hp1
HG03491.hp2
 intron_variant MODIFIER c.65-17223_65-17218d
others(8): Show 
c.65-17223_65-17218dupATATAT
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 1/21 INFO_REALIGN_3_PRIME chrX 21409228
chrX:21409228 T
T
 TTATATAT
others(1): Show 
TTATATATA
 1 a0001c0001t0019g0014
a0001c0001t0019g0014
 1 HG01884.hp2
HG01884.hp2
 intron_variant MODIFIER c.65-17225_65-17218d
others(10): Show 
c.65-17225_65-17218dupATATATAT
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 1/21 INFO_REALIGN_3_PRIME chrX 21409228
chrX:21409228 T
T
 TTATATAT
others(3): Show 
TTATATATATA
 1 a0001c0003t0014g0147
a0001c0003t0014g0147
 1 HG02615.hp1
HG02615.hp1
 intron_variant MODIFIER c.65-17227_65-17218d
others(12): Show 
c.65-17227_65-17218dupATATATATAT
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 1/21 INFO_REALIGN_3_PRIME chrX 21409228
chrX:21409228 TTA
TTA
 T
T
 7 a0001c0001t0002g0125
a0001c0001t0004g0064
a0001c0001t0005g0063
others(4): Show 
a0001c0001t0002g0125
a0001c0001t0004g0064
a0001c0001t0005g0063
a0001c0001t0017g0018
a0001c0001t0042g0008
a0001c0003t0014g0149
a0001c0003t0026g0148
 7 HG00738.hp1
HG01071.hp2
HG02647.hp1
others(4): Show 
HG00738.hp1
HG01071.hp2
HG02647.hp1
HG02965.hp1
HG03471.hp1
NA18962.hp1
NA19091.hp1
 intron_variant MODIFIER c.65-17219_65-17218d
others(4): Show 
c.65-17219_65-17218delAT
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 1/21 INFO_REALIGN_3_PRIME chrX 21409228
chrX:21409228 TTATA
TTATA
 T
T
 8 a0001c0001t0001g0037
a0001c0001t0001g0048
a0001c0001t0002g0110
others(5): Show 
a0001c0001t0001g0037
a0001c0001t0001g0048
a0001c0001t0002g0110
a0001c0001t0003g0029
a0001c0001t0004g0020
a0001c0001t0012g0045
a0001c0001t0025g0130
a0001c0001t0031g0065
 8 HG00673.hp1
HG01192.hp1
HG02040.hp1
others(5): Show 
HG00673.hp1
HG01192.hp1
HG02040.hp1
HG02074.hp1
HG02135.hp1
HG02145.hp1
HG02895.hp1
NA19062.hp1
 intron_variant MODIFIER c.65-17221_65-17218d
others(6): Show 
c.65-17221_65-17218delATAT
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 1/21 INFO_REALIGN_3_PRIME chrX 21409228
chrX:21409228 TTATATA
TTATATA
 T
T
 9 a0001c0001t0001g0067
a0001c0001t0001g0068
a0001c0001t0001g0069
others(6): Show 
a0001c0001t0001g0067
a0001c0001t0001g0068
a0001c0001t0001g0069
a0001c0001t0002g0043
a0001c0001t0012g0142
a0001c0001t0013g0066
a0001c0001t0015g0038
a0001c0001t0033g0002
a0001c0002t0007g0040
 9 HG01167.hp1
HG02027.hp1
HG02809.hp2
others(6): Show 
HG01167.hp1
HG02027.hp1
HG02809.hp2
HG03139.hp1
HG03688.hp1
NA18952.hp1
NA18989.hp1
NA19006.hp1
NA19085.hp1
 intron_variant MODIFIER c.65-17223_65-17218d
others(8): Show 
c.65-17223_65-17218delATATAT
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 1/21 INFO_REALIGN_3_PRIME chrX 21409228
chrX:21409228 TTATATAT
others(1): Show 
TTATATATA
 T
T
 13 a0001c0001t0001g0035
a0001c0001t0001g0071
a0001c0001t0002g0114
others(10): Show 
a0001c0001t0001g0035
a0001c0001t0001g0071
a0001c0001t0002g0114
a0001c0001t0003g0061
a0001c0001t0003g0070
a0001c0001t0003g0101
a0001c0001t0003g0133
a0001c0001t0003g0151
a0001c0001t0004g0132
a0001c0001t0005g0072
a0001c0001t0008g0124
a0001c0001t0015g0098
a0003c0004t0006g0154
 13 HG00140.hp1
HG01081.hp2
HG01884.hp1
others(10): Show 
HG00140.hp1
HG01081.hp2
HG01884.hp1
HG01952.hp1
HG02056.hp1
NA18945.hp1
NA18953.hp1
NA18970.hp1
NA18994.hp1
NA18995.hp1
NA19012.hp1
NA19058.hp1
NA20752.hp1
 intron_variant MODIFIER c.65-17225_65-17218d
others(10): Show 
c.65-17225_65-17218delATATATAT
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 1/21 INFO_REALIGN_3_PRIME chrX 21409228
chrX:21409228 TTATATAT
others(3): Show 
TTATATATATA
 T
T
 23 a0001c0001t0001g0051
a0001c0001t0001g0073
a0001c0001t0001g0074
others(20): Show 
a0001c0001t0001g0051
a0001c0001t0001g0073
a0001c0001t0001g0074
a0001c0001t0001g0075
a0001c0001t0001g0076
a0001c0001t0001g0077
a0001c0001t0001g0134
a0001c0001t0002g0111
a0001c0001t0003g0024
a0001c0001t0003g0136
a0001c0001t0004g0055
a0001c0001t0004g0056
a0001c0001t0004g0057
a0001c0001t0004g0129
a0001c0001t0006g0155
a0001c0001t0012g0025
a0001c0001t0016g0032
a0001c0001t0017g0146
a0001c0001t0024g0156
a0001c0001t0029g0023
a0001c0001t0035g0054
a0001c0002t0001g0104
a0001c0007t0036g0026
 23 HG00609.hp1
HG00735.hp2
HG00741.hp1
others(20): Show 
HG00609.hp1
HG00735.hp2
HG00741.hp1
HG00741.hp2
HG01074.hp1
HG01081.hp1
HG01099.hp1
HG01109.hp1
HG01258.hp1
HG01515.hp1
HG02071.hp1
HG02129.hp1
HG02280.hp1
HG02602.hp1
HG02922.hp2
HG03486.hp2
NA18948.hp1
NA18965.hp1
NA18967.hp1
NA18982.hp1
NA18983.hp1
NA20300.hp2
homoSapiens_chm13v2.hp1
 intron_variant MODIFIER c.65-17227_65-17218d
others(12): Show 
c.65-17227_65-17218delATATATATAT
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 1/21 INFO_REALIGN_3_PRIME chrX 21409228
chrX:21409228 TTATATAT
others(5): Show 
TTATATATATATA
 T
T
 24 a0001c0001t0001g0036
a0001c0001t0001g0053
a0001c0001t0001g0078
others(21): Show 
a0001c0001t0001g0036
a0001c0001t0001g0053
a0001c0001t0001g0078
a0001c0001t0001g0080
a0001c0001t0001g0109
a0001c0001t0001g0128
a0001c0001t0002g0046
a0001c0001t0002g0112
a0001c0001t0002g0113
a0001c0001t0002g0119
a0001c0001t0003g0116
a0001c0001t0004g0021
a0001c0001t0004g0117
a0001c0001t0005g0079
a0001c0001t0018g0123
a0001c0001t0032g0163
a0001c0002t0001g0042
a0001c0002t0001g0105
a0001c0002t0001g0107
a0001c0002t0001g0108
a0001c0002t0005g0106
a0001c0002t0007g0041
a0001c0006t0028g0059
a0002c0005t0003g0030
 24 HG00280.hp1
HG00735.hp1
HG01255.hp1
others(21): Show 
HG00280.hp1
HG00735.hp1
HG01255.hp1
HG01256.hp1
HG01358.hp1
HG01433.hp1
HG01934.hp1
HG01943.hp1
HG02015.hp1
HG02083.hp1
HG02738.hp1
HG02886.hp2
HG03017.hp1
HG03516.hp2
HG04115.hp1
NA18961.hp1
NA18966.hp1
NA18977.hp1
NA18984.hp1
NA19009.hp1
NA19056.hp1
NA19063.hp1
NA19066.hp1
NA19079.hp1
 intron_variant MODIFIER c.65-17229_65-17218d
others(14): Show 
c.65-17229_65-17218delATATATATATAT
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 1/21 INFO_REALIGN_3_PRIME chrX 21409228
chrX:21409228 TTATATAT
others(7): Show 
TTATATATATATATA
 T
T
 48 a0001c0001t0001g0001
a0001c0001t0001g0039
a0001c0001t0001g0052
others(45): Show 
a0001c0001t0001g0001
a0001c0001t0001g0039
a0001c0001t0001g0052
a0001c0001t0001g0058
a0001c0001t0001g0060
a0001c0001t0001g0081
a0001c0001t0001g0082
a0001c0001t0001g0083
a0001c0001t0001g0084
a0001c0001t0001g0087
a0001c0001t0001g0089
a0001c0001t0001g0090
a0001c0001t0001g0093
a0001c0001t0001g0094
a0001c0001t0001g0102
a0001c0001t0001g0103
a0001c0001t0001g0131
a0001c0001t0001g0137
a0001c0001t0001g0145
a0001c0001t0001g0158
a0001c0001t0002g0019
a0001c0001t0002g0028
a0001c0001t0002g0047
a0001c0001t0002g0049
a0001c0001t0002g0050
a0001c0001t0002g0115
a0001c0001t0002g0118
a0001c0001t0002g0120
a0001c0001t0002g0121
a0001c0001t0002g0122
a0001c0001t0005g0095
a0001c0001t0006g0157
a0001c0001t0006g0159
a0001c0001t0006g0160
a0001c0001t0006g0161
a0001c0001t0007g0022
a0001c0001t0007g0127
a0001c0001t0007g0140
a0001c0001t0008g0135
a0001c0001t0008g0143
a0001c0001t0011g0017
a0001c0001t0016g0085
a0001c0001t0021g0088
a0001c0001t0030g0086
a0001c0001t0034g0091
a0001c0001t0037g0092
a0001c0001t0039g0144
a0001c0001t0040g0027
 48 HG00642.hp1
HG01106.hp1
HG01261.hp1
others(45): Show 
HG00642.hp1
HG01106.hp1
HG01261.hp1
HG01928.hp1
HG02132.hp1
HG02258.hp1
HG02300.hp1
HG02615.hp2
HG02698.hp1
HG02735.hp1
HG02886.hp1
HG02922.hp1
HG02976.hp1
HG03041.hp2
HG03130.hp1
HG03490.hp1
HG03491.hp1
HG03492.hp1
HG03516.hp1
HG03579.hp1
HG04199.hp1
HG04204.hp1
NA18612.hp1
NA18944.hp1
NA18959.hp1
NA18960.hp1
NA18971.hp1
NA18974.hp1
NA18986.hp1
NA18990.hp1
NA19000.hp1
NA19004.hp1
NA19005.hp1
NA19007.hp1
NA19043.hp1
NA19055.hp1
NA19060.hp1
NA19068.hp1
NA19070.hp1
NA19072.hp1
NA19076.hp1
NA19082.hp1
NA19086.hp1
NA19088.hp1
NA19089.hp1
NA20300.hp1
NA20805.hp1
NA20905.hp1
 intron_variant MODIFIER c.65-17231_65-17218d
others(16): Show 
c.65-17231_65-17218delATATATATATATAT
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 1/21 INFO_REALIGN_3_PRIME chrX 21409228
chrX:21409228 TTATATAT
others(9): Show 
TTATATATATATATATA
 T
T
 12 a0001c0001t0001g0096
a0001c0001t0001g0097
a0001c0001t0003g0015
others(9): Show 
a0001c0001t0001g0096
a0001c0001t0001g0097
a0001c0001t0003g0015
a0001c0001t0003g0044
a0001c0001t0009g0010
a0001c0001t0010g0152
a0001c0001t0010g0153
a0001c0001t0010g0162
a0001c0001t0011g0016
a0001c0001t0011g0138
a0001c0001t0020g0141
a0001c0001t0023g0006
 12 HG01243.hp1
HG02280.hp2
HG02717.hp1
others(9): Show 
HG01243.hp1
HG02280.hp2
HG02717.hp1
HG03041.hp1
HG03209.hp1
HG03225.hp1
HG03654.hp1
HG03710.hp1
HG03942.hp1
HG04228.hp1
NA18522.hp1
NA19240.hp2
 intron_variant MODIFIER c.65-17233_65-17218d
others(18): Show 
c.65-17233_65-17218delATATATATATATATAT
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 1/21 INFO_REALIGN_3_PRIME chrX 21409228
chrX:21409228 TTATATAT
others(11): Show 
TTATATATATATATATATA
 T
T
 4 a0001c0001t0002g0126
a0001c0001t0003g0031
a0001c0001t0009g0011
others(1): Show 
a0001c0001t0002g0126
a0001c0001t0003g0031
a0001c0001t0009g0011
a0001c0001t0009g0012
 4 HG02572.hp1
HG02809.hp1
HG02976.hp2
others(1): Show 
HG02572.hp1
HG02809.hp1
HG02976.hp2
NA18943.hp1
 intron_variant MODIFIER c.65-17235_65-17218d
others(20): Show 
c.65-17235_65-17218delATATATATATATATATAT
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 1/21 INFO_REALIGN_3_PRIME chrX 21409228
chrX:21409228 TTATATAT
others(13): Show 
TTATATATATATATATATATA
 T
T
 4 a0001c0001t0002g0004
a0001c0001t0005g0099
a0001c0001t0008g0005
others(1): Show 
a0001c0001t0002g0004
a0001c0001t0005g0099
a0001c0001t0008g0005
a0001c0001t0013g0100
 4 HG01069.hp1
HG01071.hp1
NA18747.hp1
others(1): Show 
HG01069.hp1
HG01071.hp1
NA18747.hp1
NA18955.hp1
 intron_variant MODIFIER c.65-17237_65-17218d
others(22): Show 
c.65-17237_65-17218delATATATATATATATATATAT
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 1/21 INFO_REALIGN_3_PRIME chrX 21409228
chrX:21409228 TTATATAT
others(19): Show 
TTATATATATATATATATATATATATA
 T
T
 2 a0001c0001t0009g0013
a0001c0001t0041g0009
a0001c0001t0009g0013
a0001c0001t0041g0009
 2 HG03098.hp1
HG03486.hp1
HG03098.hp1
HG03486.hp1
 intron_variant MODIFIER c.65-17243_65-17218d
others(28): Show 
c.65-17243_65-17218delATATATATATATATATATATATATAT
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 1/21 INFO_REALIGN_3_PRIME chrX 21409228
chrX:21409272 A
A
 T
T
 1 a0001c0001t0015g0098
a0001c0001t0015g0098
 1 HG01952.hp1
HG01952.hp1
 intron_variant MODIFIER c.65-17225A>T
c.65-17225A>T
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 1/21 chrX 21409272
chrX:21409389 G
G
 C
C
 3 a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
 3 HG02615.hp1
HG02965.hp1
HG03471.hp1
HG02615.hp1
HG02965.hp1
HG03471.hp1
 intron_variant MODIFIER c.65-17108G>C
c.65-17108G>C
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 1/21 chrX 21409389
chrX:21409555 G
G
 C
C
 2 a0001c0001t0008g0143
a0001c0001t0039g0144
a0001c0001t0008g0143
a0001c0001t0039g0144
 2 NA18986.hp1
NA19055.hp1
NA18986.hp1
NA19055.hp1
 intron_variant MODIFIER c.65-16942G>C
c.65-16942G>C
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 1/21 chrX 21409555
chrX:21410032 C
C
 CTG
CTG
 34 a0001c0001t0001g0134
a0001c0001t0002g0003
a0001c0001t0002g0046
others(31): Show 
a0001c0001t0001g0134
a0001c0001t0002g0003
a0001c0001t0002g0046
a0001c0001t0002g0047
a0001c0001t0002g0049
a0001c0001t0002g0050
a0001c0001t0002g0110
a0001c0001t0002g0111
a0001c0001t0002g0118
a0001c0001t0002g0119
a0001c0001t0002g0120
a0001c0001t0002g0121
a0001c0001t0002g0122
a0001c0001t0002g0125
a0001c0001t0002g0126
a0001c0001t0003g0015
a0001c0001t0003g0044
a0001c0001t0003g0133
a0001c0001t0007g0140
a0001c0001t0008g0124
a0001c0001t0008g0135
a0001c0001t0008g0143
a0001c0001t0009g0010
a0001c0001t0009g0011
a0001c0001t0009g0012
a0001c0001t0009g0013
a0001c0001t0011g0016
a0001c0001t0011g0138
a0001c0001t0017g0018
a0001c0001t0019g0014
a0001c0001t0020g0141
a0001c0001t0039g0144
a0001c0001t0041g0009
a0001c0002t0001g0042
 34 HG00621.hp1
HG00741.hp2
HG01071.hp2
others(31): Show 
HG00621.hp1
HG00741.hp2
HG01071.hp2
HG01243.hp1
HG01884.hp2
HG01934.hp1
HG02071.hp1
HG02074.hp1
HG02083.hp1
HG02280.hp2
HG02572.hp1
HG02717.hp1
HG02809.hp1
HG02922.hp1
HG03041.hp1
HG03098.hp1
HG03486.hp1
HG03942.hp1
NA18522.hp1
NA18612.hp1
NA18943.hp1
NA18944.hp1
NA18953.hp1
NA18966.hp1
NA18986.hp1
NA18990.hp1
NA19000.hp1
NA19004.hp1
NA19012.hp1
NA19055.hp1
NA19070.hp1
NA19076.hp1
NA19086.hp1
NA19091.hp1
 intron_variant MODIFIER c.65-16433_65-16432d
others(4): Show 
c.65-16433_65-16432dupGT
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 1/21 INFO_REALIGN_3_PRIME chrX 21410032
chrX:21410032 C
C
 CTGTG
CTGTG
 2 a0001c0001t0011g0017
a0001c0001t0042g0008
a0001c0001t0011g0017
a0001c0001t0042g0008
 2 HG02647.hp1
HG03579.hp1
HG02647.hp1
HG03579.hp1
 intron_variant MODIFIER c.65-16435_65-16432d
others(6): Show 
c.65-16435_65-16432dupGTGT
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 1/21 INFO_REALIGN_3_PRIME chrX 21410032
chrX:21410032 CTG
CTG
 C
C
 10 a0001c0001t0002g0019
a0001c0001t0002g0028
a0001c0001t0003g0024
others(7): Show 
a0001c0001t0002g0019
a0001c0001t0002g0028
a0001c0001t0003g0024
a0001c0001t0003g0029
a0001c0001t0006g0155
a0001c0001t0012g0025
a0001c0001t0038g0150
a0001c0001t0040g0027
a0001c0007t0036g0026
a0003c0004t0006g0154
 10 HG01081.hp1
HG01106.hp1
HG01884.hp1
others(7): Show 
HG01081.hp1
HG01106.hp1
HG01884.hp1
HG02258.hp1
HG02280.hp1
HG02895.hp1
HG02922.hp2
HG03486.hp2
NA19043.hp1
NA19240.hp1
 intron_variant MODIFIER c.65-16433_65-16432d
others(4): Show 
c.65-16433_65-16432delGT
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 1/21 INFO_REALIGN_3_PRIME chrX 21410032
chrX:21410032 CTGTG
CTGTG
 C
C
 13 a0001c0001t0001g0158
a0001c0001t0006g0157
a0001c0001t0006g0159
others(10): Show 
a0001c0001t0001g0158
a0001c0001t0006g0157
a0001c0001t0006g0159
a0001c0001t0006g0160
a0001c0001t0006g0161
a0001c0001t0010g0152
a0001c0001t0010g0153
a0001c0001t0010g0162
a0001c0001t0017g0146
a0001c0001t0023g0006
a0001c0001t0024g0156
a0001c0001t0043g0007
a0002c0005t0003g0030
 13 HG01109.hp1
HG02615.hp2
HG02886.hp1
others(10): Show 
HG01109.hp1
HG02615.hp2
HG02886.hp1
HG02886.hp2
HG02976.hp1
HG03130.hp1
HG03209.hp1
HG03225.hp1
HG03491.hp2
HG03516.hp1
HG03654.hp1
NA19240.hp2
NA20300.hp2
 intron_variant MODIFIER c.65-16435_65-16432d
others(6): Show 
c.65-16435_65-16432delGTGT
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 1/21 INFO_REALIGN_3_PRIME chrX 21410032
chrX:21410046 G
G
 GTGTT
GTGTT
 3 a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
 3 HG02615.hp1
HG02965.hp1
HG03471.hp1
HG02615.hp1
HG02965.hp1
HG03471.hp1
 intron_variant MODIFIER c.65-16448_65-16447i
others(6): Show 
c.65-16448_65-16447insTTGT
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 1/21 INFO_REALIGN_3_PRIME chrX 21410046
chrX:21410645 C
C
 A
A
 3 a0001c0001t0002g0004
a0001c0001t0003g0031
a0001c0001t0008g0005
a0001c0001t0002g0004
a0001c0001t0003g0031
a0001c0001t0008g0005
 3 HG01069.hp1
HG01071.hp1
HG02976.hp2
HG01069.hp1
HG01071.hp1
HG02976.hp2
 intron_variant MODIFIER c.65-15852C>A
c.65-15852C>A
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 1/21 chrX 21410645
chrX:21410790 T
T
 TTG
TTG
 7 a0001c0001t0007g0140
a0001c0001t0009g0010
a0001c0001t0009g0011
others(4): Show 
a0001c0001t0007g0140
a0001c0001t0009g0010
a0001c0001t0009g0011
a0001c0001t0009g0012
a0001c0001t0009g0013
a0001c0001t0040g0027
a0001c0001t0041g0009
 7 HG02280.hp2
HG02572.hp1
HG02809.hp1
others(4): Show 
HG02280.hp2
HG02572.hp1
HG02809.hp1
HG02922.hp1
HG03098.hp1
HG03486.hp1
NA19043.hp1
 intron_variant MODIFIER c.65-15681_65-15680d
others(4): Show 
c.65-15681_65-15680dupGT
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 1/21 INFO_REALIGN_3_PRIME chrX 21410790
chrX:21410790 TTG
TTG
 T
T
 4 a0001c0001t0001g0069
a0001c0003t0014g0147
a0001c0003t0014g0149
others(1): Show 
a0001c0001t0001g0069
a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
 4 HG02615.hp1
HG02965.hp1
HG03471.hp1
others(1): Show 
HG02615.hp1
HG02965.hp1
HG03471.hp1
NA19085.hp1
 intron_variant MODIFIER c.65-15681_65-15680d
others(4): Show 
c.65-15681_65-15680delGT
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 1/21 INFO_REALIGN_3_PRIME chrX 21410790
chrX:21410898 T
T
 TTG
TTG
 1 a0001c0001t0038g0150
a0001c0001t0038g0150
 1 NA19240.hp1
NA19240.hp1
 intron_variant MODIFIER c.65-15582_65-15581d
others(4): Show 
c.65-15582_65-15581dupTG
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 1/21 INFO_REALIGN_3_PRIME chrX 21410898
chrX:21410906 G
G
 A
A
 1 a0001c0001t0027g0034
a0001c0001t0027g0034
 1 HG02486.hp1
HG02486.hp1
 intron_variant MODIFIER c.65-15591G>A
c.65-15591G>A
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 1/21 chrX 21410906
chrX:21410964 A
A
 G
G
 1 a0001c0001t0042g0008
a0001c0001t0042g0008
 1 HG02647.hp1
HG02647.hp1
 intron_variant MODIFIER c.65-15533A>G
c.65-15533A>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 1/21 chrX 21410964
chrX:21411032 ACTTTT
ACTTTT
 A
A
 3 a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
 3 HG02615.hp1
HG02965.hp1
HG03471.hp1
HG02615.hp1
HG02965.hp1
HG03471.hp1
 intron_variant MODIFIER c.65-15459_65-15455d
others(7): Show 
c.65-15459_65-15455delCTTTT
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 1/21 INFO_REALIGN_3_PRIME chrX 21411032
chrX:21411253 A
A
 G
G
 2 a0001c0001t0022g0033
a0001c0001t0027g0034
a0001c0001t0022g0033
a0001c0001t0027g0034
 2 HG02055.hp1
HG02486.hp1
HG02055.hp1
HG02486.hp1
 intron_variant MODIFIER c.65-15244A>G
c.65-15244A>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 1/21 chrX 21411253
chrX:21411297 C
C
 T
T
 2 a0001c0001t0022g0033
a0001c0001t0027g0034
a0001c0001t0022g0033
a0001c0001t0027g0034
 2 HG02055.hp1
HG02486.hp1
HG02055.hp1
HG02486.hp1
 intron_variant MODIFIER c.65-15200C>T
c.65-15200C>T
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 1/21 chrX 21411297
chrX:21411330 G
G
 A
A
 3 a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
 3 HG02615.hp1
HG02965.hp1
HG03471.hp1
HG02615.hp1
HG02965.hp1
HG03471.hp1
 intron_variant MODIFIER c.65-15167G>A
c.65-15167G>A
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 1/21 chrX 21411330
chrX:21411454 G
G
 A
A
 3 a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
 3 HG02615.hp1
HG02965.hp1
HG03471.hp1
HG02615.hp1
HG02965.hp1
HG03471.hp1
 intron_variant MODIFIER c.65-15043G>A
c.65-15043G>A
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 1/21 chrX 21411454
chrX:21412034 C
C
 A
A
 3 a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
 3 HG02615.hp1
HG02965.hp1
HG03471.hp1
HG02615.hp1
HG02965.hp1
HG03471.hp1
 intron_variant MODIFIER c.65-14463C>A
c.65-14463C>A
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 1/21 chrX 21412034
chrX:21412567 T
T
 G
G
 1 a0001c0001t0003g0101
a0001c0001t0003g0101
 1 NA18995.hp1
NA18995.hp1
 intron_variant MODIFIER c.65-13930T>G
c.65-13930T>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 1/21 chrX 21412567
chrX:21412657 A
A
 G
G
 1 a0001c0001t0009g0012
a0001c0001t0009g0012
 1 HG02572.hp1
HG02572.hp1
 intron_variant MODIFIER c.65-13840A>G
c.65-13840A>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 1/21 chrX 21412657
chrX:21414305 A
A
 C
C
 1 a0001c0001t0015g0038
a0001c0001t0015g0038
 1 HG03688.hp1
HG03688.hp1
 intron_variant MODIFIER c.65-12192A>C
c.65-12192A>C
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 1/21 chrX 21414305
chrX:21414419 A
A
 AT
AT
 4 a0001c0001t0002g0111
a0001c0001t0002g0112
a0001c0001t0002g0113
others(1): Show 
a0001c0001t0002g0111
a0001c0001t0002g0112
a0001c0001t0002g0113
a0001c0001t0002g0114
 4 HG00140.hp1
HG00735.hp1
HG00741.hp2
others(1): Show 
HG00140.hp1
HG00735.hp1
HG00741.hp2
HG01433.hp1
 intron_variant MODIFIER c.65-12067dupT
c.65-12067dupT
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 1/21 INFO_REALIGN_3_PRIME chrX 21414419
chrX:21414419 AT
AT
 A
A
 7 a0001c0001t0013g0066
a0001c0002t0001g0042
a0001c0002t0001g0104
others(4): Show 
a0001c0001t0013g0066
a0001c0002t0001g0042
a0001c0002t0001g0104
a0001c0002t0001g0105
a0001c0002t0005g0106
a0001c0002t0007g0040
a0001c0002t0007g0041
 7 HG01167.hp1
HG01934.hp1
HG01943.hp1
others(4): Show 
HG01167.hp1
HG01934.hp1
HG01943.hp1
HG02027.hp1
HG02129.hp1
NA18977.hp1
NA19079.hp1
 intron_variant MODIFIER c.65-12067delT
c.65-12067delT
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 1/21 INFO_REALIGN_3_PRIME chrX 21414419
chrX:21414487 G
G
 A
A
 2 a0001c0001t0002g0004
a0001c0001t0008g0005
a0001c0001t0002g0004
a0001c0001t0008g0005
 2 HG01069.hp1
HG01071.hp1
HG01069.hp1
HG01071.hp1
 intron_variant MODIFIER c.65-12010G>A
c.65-12010G>A
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 1/21 chrX 21414487
chrX:21414548 C
C
 G
G
 2 a0001c0001t0023g0006
a0001c0001t0043g0007
a0001c0001t0023g0006
a0001c0001t0043g0007
 2 HG03491.hp2
HG03654.hp1
HG03491.hp2
HG03654.hp1
 intron_variant MODIFIER c.65-11949C>G
c.65-11949C>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 1/21 chrX 21414548
chrX:21414603 T
T
 C
C
 1 a0001c0001t0001g0053
a0001c0001t0001g0053
 1 HG00280.hp1
HG00280.hp1
 intron_variant MODIFIER c.65-11894T>C
c.65-11894T>C
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 1/21 chrX 21414603
chrX:21414975 C
C
 T
T
 2 a0001c0001t0001g0077
a0001c0001t0029g0023
a0001c0001t0001g0077
a0001c0001t0029g0023
 2 HG00735.hp2
HG01099.hp1
HG00735.hp2
HG01099.hp1
 intron_variant MODIFIER c.65-11522C>T
c.65-11522C>T
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 1/21 chrX 21414975
chrX:21415235 G
G
 A
A
 3 a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
 3 HG02615.hp1
HG02965.hp1
HG03471.hp1
HG02615.hp1
HG02965.hp1
HG03471.hp1
 intron_variant MODIFIER c.65-11262G>A
c.65-11262G>A
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 1/21 chrX 21415235
chrX:21415547 G
G
 A
A
 1 a0001c0001t0003g0024
a0001c0001t0003g0024
 1 HG02280.hp1
HG02280.hp1
 intron_variant MODIFIER c.65-10950G>A
c.65-10950G>A
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 1/21 chrX 21415547
chrX:21415596 C
C
 T
T
 4 a0001c0001t0001g0062
a0001c0001t0001g0075
a0001c0001t0001g0076
others(1): Show 
a0001c0001t0001g0062
a0001c0001t0001g0075
a0001c0001t0001g0076
a0001c0001t0001g0131
 4 NA18948.hp1
NA18959.hp1
NA18982.hp1
others(1): Show 
NA18948.hp1
NA18959.hp1
NA18982.hp1
NA18988.hp1
 intron_variant MODIFIER c.65-10901C>T
c.65-10901C>T
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 1/21 chrX 21415596
chrX:21415641 T
T
 TG
TG
 2 a0001c0001t0004g0020
a0001c0001t0029g0023
a0001c0001t0004g0020
a0001c0001t0029g0023
 2 HG01099.hp1
HG01192.hp1
HG01099.hp1
HG01192.hp1
 intron_variant MODIFIER c.65-10850dupG
c.65-10850dupG
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 1/21 INFO_REALIGN_3_PRIME chrX 21415641
chrX:21415648 A
A
 AG
AG
 1 a0001c0001t0001g0039
a0001c0001t0001g0039
 1 HG00642.hp1
HG00642.hp1
 intron_variant MODIFIER c.65-10843dupG
c.65-10843dupG
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 1/21 INFO_REALIGN_3_PRIME chrX 21415648
chrX:21415756 G
G
 A
A
 1 a0001c0001t0001g0075
a0001c0001t0001g0075
 1 NA18948.hp1
NA18948.hp1
 intron_variant MODIFIER c.65-10741G>A
c.65-10741G>A
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 1/21 chrX 21415756
chrX:21415827 CAT
CAT
 C
C
 10 a0001c0001t0001g0001
a0001c0001t0001g0037
a0001c0001t0001g0039
others(7): Show 
a0001c0001t0001g0001
a0001c0001t0001g0037
a0001c0001t0001g0039
a0001c0001t0001g0067
a0001c0001t0001g0078
a0001c0001t0001g0081
a0001c0001t0001g0082
a0001c0001t0001g0083
a0001c0001t0001g0084
a0001c0001t0007g0127
 10 HG00642.hp1
HG01261.hp1
HG01928.hp1
others(7): Show 
HG00642.hp1
HG01261.hp1
HG01928.hp1
HG02135.hp1
NA18952.hp1
NA19009.hp1
NA19068.hp1
NA19072.hp1
NA19089.hp1
NA20300.hp1
 intron_variant MODIFIER c.65-10664_65-10663d
others(4): Show 
c.65-10664_65-10663delTA
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 1/21 INFO_REALIGN_3_PRIME chrX 21415827
chrX:21415831 TATAC
TATAC
 T
T
 1 a0001c0001t0012g0045
a0001c0001t0012g0045
 1 HG02145.hp1
HG02145.hp1
 intron_variant MODIFIER c.65-10664_65-10661d
others(6): Show 
c.65-10664_65-10661delTACA
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 1/21 INFO_REALIGN_3_PRIME chrX 21415831
chrX:21415833 TAC
TAC
 T
T
 76 a0001c0001t0001g0035
a0001c0001t0001g0036
a0001c0001t0001g0048
others(73): Show 
a0001c0001t0001g0035
a0001c0001t0001g0036
a0001c0001t0001g0048
a0001c0001t0001g0052
a0001c0001t0001g0053
a0001c0001t0001g0058
a0001c0001t0001g0060
a0001c0001t0001g0062
a0001c0001t0001g0069
a0001c0001t0001g0071
a0001c0001t0001g0074
a0001c0001t0001g0075
a0001c0001t0001g0087
a0001c0001t0001g0089
a0001c0001t0001g0090
a0001c0001t0001g0093
a0001c0001t0001g0094
a0001c0001t0001g0096
a0001c0001t0001g0097
a0001c0001t0001g0102
a0001c0001t0001g0103
a0001c0001t0001g0109
a0001c0001t0001g0128
a0001c0001t0001g0134
a0001c0001t0001g0137
a0001c0001t0002g0019
a0001c0001t0002g0115
a0001c0001t0003g0024
a0001c0001t0003g0031
a0001c0001t0003g0044
a0001c0001t0003g0061
a0001c0001t0003g0116
a0001c0001t0003g0133
a0001c0001t0003g0136
a0001c0001t0004g0020
a0001c0001t0004g0021
a0001c0001t0004g0055
a0001c0001t0004g0056
a0001c0001t0004g0057
a0001c0001t0004g0117
a0001c0001t0004g0129
a0001c0001t0005g0063
a0001c0001t0005g0072
a0001c0001t0005g0095
a0001c0001t0005g0099
a0001c0001t0007g0022
a0001c0001t0009g0010
a0001c0001t0009g0011
a0001c0001t0009g0012
a0001c0001t0009g0013
a0001c0001t0013g0066
a0001c0001t0013g0100
a0001c0001t0015g0038
a0001c0001t0015g0098
a0001c0001t0016g0032
a0001c0001t0016g0085
a0001c0001t0017g0018
a0001c0001t0018g0123
a0001c0001t0021g0088
a0001c0001t0023g0006
a0001c0001t0025g0130
a0001c0001t0030g0086
a0001c0001t0031g0065
a0001c0001t0032g0163
a0001c0001t0033g0002
a0001c0001t0034g0091
a0001c0001t0037g0092
a0001c0001t0041g0009
a0001c0002t0001g0042
a0001c0002t0001g0104
a0001c0002t0001g0105
a0001c0002t0001g0107
a0001c0002t0001g0108
a0001c0002t0005g0106
a0001c0002t0007g0040
a0001c0006t0028g0059
 76 HG00280.hp1
HG00609.hp1
HG00673.hp1
others(73): Show 
HG00280.hp1
HG00609.hp1
HG00673.hp1
HG00741.hp1
HG01071.hp2
HG01106.hp1
HG01167.hp1
HG01192.hp1
HG01256.hp1
HG01258.hp1
HG01358.hp1
HG01934.hp1
HG01943.hp1
HG01952.hp1
HG02015.hp1
HG02027.hp1
HG02040.hp1
HG02056.hp1
HG02071.hp1
HG02129.hp1
HG02132.hp1
HG02280.hp1
HG02280.hp2
HG02300.hp1
HG02572.hp1
HG02602.hp1
HG02698.hp1
HG02735.hp1
HG02738.hp1
HG02809.hp1
HG02976.hp2
HG03017.hp1
HG03041.hp2
HG03098.hp1
HG03486.hp1
HG03490.hp1
HG03491.hp1
HG03492.hp1
HG03516.hp2
HG03654.hp1
HG03688.hp1
HG03710.hp1
HG03942.hp1
HG04115.hp1
HG04199.hp1
HG04204.hp1
HG04228.hp1
NA18747.hp1
NA18945.hp1
NA18948.hp1
NA18953.hp1
NA18955.hp1
NA18960.hp1
NA18962.hp1
NA18965.hp1
NA18970.hp1
NA18971.hp1
NA18974.hp1
NA18983.hp1
NA18984.hp1
NA18988.hp1
NA19005.hp1
NA19006.hp1
NA19007.hp1
NA19056.hp1
NA19058.hp1
NA19060.hp1
NA19062.hp1
NA19063.hp1
NA19066.hp1
NA19079.hp1
NA19085.hp1
NA19088.hp1
NA20805.hp1
NA20905.hp1
homoSapiens_chm13v2.hp1
 intron_variant MODIFIER c.65-10626_65-10625d
others(4): Show 
c.65-10626_65-10625delCA
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 1/21 INFO_REALIGN_3_PRIME chrX 21415833
chrX:21415833 TACAC
TACAC
 T
T
 27 a0001c0001t0001g0080
a0001c0001t0001g0145
a0001c0001t0001g0158
others(24): Show 
a0001c0001t0001g0080
a0001c0001t0001g0145
a0001c0001t0001g0158
a0001c0001t0002g0028
a0001c0001t0002g0043
a0001c0001t0003g0029
a0001c0001t0003g0151
a0001c0001t0006g0155
a0001c0001t0006g0157
a0001c0001t0006g0159
a0001c0001t0006g0161
a0001c0001t0010g0152
a0001c0001t0010g0153
a0001c0001t0010g0162
a0001c0001t0012g0025
a0001c0001t0017g0146
a0001c0001t0024g0156
a0001c0001t0038g0150
a0001c0001t0040g0027
a0001c0001t0042g0008
a0001c0001t0043g0007
a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
a0001c0007t0036g0026
a0002c0005t0003g0030
a0003c0004t0006g0154
 27 HG01081.hp1
HG01081.hp2
HG01109.hp1
others(24): Show 
HG01081.hp1
HG01081.hp2
HG01109.hp1
HG01255.hp1
HG01884.hp1
HG02258.hp1
HG02615.hp1
HG02647.hp1
HG02809.hp2
HG02886.hp1
HG02886.hp2
HG02895.hp1
HG02922.hp2
HG02965.hp1
HG02976.hp1
HG03130.hp1
HG03209.hp1
HG03225.hp1
HG03471.hp1
HG03486.hp2
HG03491.hp2
HG03516.hp1
NA19043.hp1
NA19082.hp1
NA19240.hp1
NA19240.hp2
NA20300.hp2
 intron_variant MODIFIER c.65-10628_65-10625d
others(6): Show 
c.65-10628_65-10625delCACA
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 1/21 INFO_REALIGN_3_PRIME chrX 21415833
chrX:21415833 TACACAC
TACACAC
 T
T
 8 a0001c0001t0001g0076
a0001c0001t0002g0111
a0001c0001t0002g0112
others(5): Show 
a0001c0001t0001g0076
a0001c0001t0002g0111
a0001c0001t0002g0112
a0001c0001t0002g0113
a0001c0001t0002g0114
a0001c0001t0002g0125
a0001c0001t0006g0160
a0001c0001t0012g0142
 8 HG00140.hp1
HG00735.hp1
HG00741.hp2
others(5): Show 
HG00140.hp1
HG00735.hp1
HG00741.hp2
HG01433.hp1
HG02615.hp2
HG03139.hp1
NA18982.hp1
NA19091.hp1
 intron_variant MODIFIER c.65-10630_65-10625d
others(8): Show 
c.65-10630_65-10625delCACACA
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 1/21 INFO_REALIGN_3_PRIME chrX 21415833
chrX:21415833 TACACACA
others(1): Show 
TACACACAC
 T
T
 16 a0001c0001t0002g0003
a0001c0001t0002g0004
a0001c0001t0002g0046
others(13): Show 
a0001c0001t0002g0003
a0001c0001t0002g0004
a0001c0001t0002g0046
a0001c0001t0002g0047
a0001c0001t0002g0049
a0001c0001t0002g0050
a0001c0001t0002g0110
a0001c0001t0002g0118
a0001c0001t0002g0119
a0001c0001t0002g0120
a0001c0001t0002g0121
a0001c0001t0002g0122
a0001c0001t0002g0126
a0001c0001t0008g0005
a0001c0001t0008g0124
a0001c0001t0008g0135
 16 HG00621.hp1
HG01069.hp1
HG01071.hp1
others(13): Show 
HG00621.hp1
HG01069.hp1
HG01071.hp1
HG02074.hp1
HG02083.hp1
NA18612.hp1
NA18943.hp1
NA18944.hp1
NA18966.hp1
NA18990.hp1
NA19000.hp1
NA19004.hp1
NA19012.hp1
NA19070.hp1
NA19076.hp1
NA19086.hp1
 intron_variant MODIFIER c.65-10632_65-10625d
others(10): Show 
c.65-10632_65-10625delCACACACA
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 1/21 INFO_REALIGN_3_PRIME chrX 21415833
chrX:21415833 TACACACA
others(3): Show 
TACACACACAC
 T
T
 2 a0001c0001t0007g0140
a0001c0001t0020g0141
a0001c0001t0007g0140
a0001c0001t0020g0141
 2 HG01243.hp1
HG02922.hp1
HG01243.hp1
HG02922.hp1
 intron_variant MODIFIER c.65-10634_65-10625d
others(12): Show 
c.65-10634_65-10625delCACACACACA
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 1/21 INFO_REALIGN_3_PRIME chrX 21415833
chrX:21415833 TACACACA
others(7): Show 
TACACACACACACAC
 T
T
 1 a0001c0001t0001g0131
a0001c0001t0001g0131
 1 NA18959.hp1
NA18959.hp1
 intron_variant MODIFIER c.65-10638_65-10625d
others(16): Show 
c.65-10638_65-10625delCACACACACACACA
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 1/21 INFO_REALIGN_3_PRIME chrX 21415833
chrX:21415865 CACACACA
others(1): Show 
CACACACAT
 C
C
 2 a0001c0001t0008g0143
a0001c0001t0039g0144
a0001c0001t0008g0143
a0001c0001t0039g0144
 2 NA18986.hp1
NA19055.hp1
NA18986.hp1
NA19055.hp1
 intron_variant MODIFIER c.65-10630_65-10623d
others(10): Show 
c.65-10630_65-10623delCACACATA
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 1/21 INFO_REALIGN_3_PRIME chrX 21415865
chrX:21415867 C
C
 T
T
 1 a0001c0001t0019g0014
a0001c0001t0019g0014
 1 HG01884.hp2
HG01884.hp2
 intron_variant MODIFIER c.65-10630C>T
c.65-10630C>T
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 1/21 chrX 21415867
chrX:21415869 C
C
 T
T
 14 a0001c0001t0003g0015
a0001c0001t0009g0010
a0001c0001t0009g0011
others(11): Show 
a0001c0001t0003g0015
a0001c0001t0009g0010
a0001c0001t0009g0011
a0001c0001t0009g0012
a0001c0001t0009g0013
a0001c0001t0011g0016
a0001c0001t0011g0017
a0001c0001t0011g0138
a0001c0001t0017g0018
a0001c0001t0019g0014
a0001c0001t0041g0009
a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
 14 HG01071.hp2
HG01884.hp2
HG02280.hp2
others(11): Show 
HG01071.hp2
HG01884.hp2
HG02280.hp2
HG02572.hp1
HG02615.hp1
HG02717.hp1
HG02809.hp1
HG02965.hp1
HG03041.hp1
HG03098.hp1
HG03471.hp1
HG03486.hp1
HG03579.hp1
NA18522.hp1
 intron_variant MODIFIER c.65-10628C>T
c.65-10628C>T
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 1/21 chrX 21415869
chrX:21415869 CACAT
CACAT
 C
C
 3 a0001c0001t0004g0064
a0001c0001t0022g0033
a0001c0001t0027g0034
a0001c0001t0004g0064
a0001c0001t0022g0033
a0001c0001t0027g0034
 3 HG00738.hp1
HG02055.hp1
HG02486.hp1
HG00738.hp1
HG02055.hp1
HG02486.hp1
 intron_variant MODIFIER c.65-10626_65-10623d
others(6): Show 
c.65-10626_65-10623delCATA
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 1/21 INFO_REALIGN_3_PRIME chrX 21415869
chrX:21415871 C
C
 T
T
 20 a0001c0001t0003g0015
a0001c0001t0003g0024
a0001c0001t0003g0070
others(17): Show 
a0001c0001t0003g0015
a0001c0001t0003g0024
a0001c0001t0003g0070
a0001c0001t0003g0101
a0001c0001t0005g0095
a0001c0001t0009g0010
a0001c0001t0009g0011
a0001c0001t0009g0012
a0001c0001t0009g0013
a0001c0001t0011g0016
a0001c0001t0011g0017
a0001c0001t0011g0138
a0001c0001t0017g0018
a0001c0001t0019g0014
a0001c0001t0035g0054
a0001c0001t0041g0009
a0001c0001t0042g0008
a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
 20 HG01071.hp2
HG01884.hp2
HG02280.hp1
others(17): Show 
HG01071.hp2
HG01884.hp2
HG02280.hp1
HG02280.hp2
HG02572.hp1
HG02615.hp1
HG02647.hp1
HG02717.hp1
HG02809.hp1
HG02965.hp1
HG03041.hp1
HG03098.hp1
HG03471.hp1
HG03486.hp1
HG03579.hp1
NA18522.hp1
NA18960.hp1
NA18967.hp1
NA18994.hp1
NA18995.hp1
 intron_variant MODIFIER c.65-10626C>T
c.65-10626C>T
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 1/21 chrX 21415871
chrX:21415871 CAT
CAT
 C
C
 1 a0001c0001t0001g0073
a0001c0001t0001g0073
 1 HG01515.hp1
HG01515.hp1
 intron_variant MODIFIER c.65-10611_65-10610d
others(4): Show 
c.65-10611_65-10610delAT
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 1/21 INFO_REALIGN_3_PRIME chrX 21415871
chrX:21416854 C
C
 CTTTG
CTTTG
 42 a0001c0001t0001g0158
a0001c0001t0002g0028
a0001c0001t0003g0015
others(39): Show 
a0001c0001t0001g0158
a0001c0001t0002g0028
a0001c0001t0003g0015
a0001c0001t0003g0024
a0001c0001t0003g0029
a0001c0001t0003g0151
a0001c0001t0006g0155
a0001c0001t0006g0157
a0001c0001t0006g0159
a0001c0001t0006g0160
a0001c0001t0006g0161
a0001c0001t0007g0140
a0001c0001t0009g0010
a0001c0001t0009g0011
a0001c0001t0009g0012
a0001c0001t0009g0013
a0001c0001t0010g0152
a0001c0001t0010g0153
a0001c0001t0010g0162
a0001c0001t0011g0016
a0001c0001t0011g0017
a0001c0001t0011g0138
a0001c0001t0012g0025
a0001c0001t0017g0018
a0001c0001t0017g0146
a0001c0001t0019g0014
a0001c0001t0020g0141
a0001c0001t0022g0033
a0001c0001t0023g0006
a0001c0001t0024g0156
a0001c0001t0027g0034
a0001c0001t0038g0150
a0001c0001t0040g0027
a0001c0001t0041g0009
a0001c0001t0042g0008
a0001c0001t0043g0007
a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
a0001c0007t0036g0026
a0002c0005t0003g0030
a0003c0004t0006g0154
 42 HG01071.hp2
HG01081.hp1
HG01081.hp2
others(39): Show 
HG01071.hp2
HG01081.hp1
HG01081.hp2
HG01109.hp1
HG01243.hp1
HG01884.hp1
HG01884.hp2
HG02055.hp1
HG02258.hp1
HG02280.hp1
HG02280.hp2
HG02486.hp1
HG02572.hp1
HG02615.hp1
HG02615.hp2
HG02647.hp1
HG02717.hp1
HG02809.hp1
HG02886.hp1
HG02886.hp2
HG02895.hp1
HG02922.hp1
HG02922.hp2
HG02965.hp1
HG02976.hp1
HG03041.hp1
HG03098.hp1
HG03130.hp1
HG03209.hp1
HG03225.hp1
HG03471.hp1
HG03486.hp1
HG03486.hp2
HG03491.hp2
HG03516.hp1
HG03579.hp1
HG03654.hp1
NA18522.hp1
NA19043.hp1
NA19240.hp1
NA19240.hp2
NA20300.hp2
 intron_variant MODIFIER c.65-9640_65-9639ins
others(4): Show 
c.65-9640_65-9639insGTTT
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 1/21 INFO_REALIGN_3_PRIME chrX 21416854
chrX:21416932 CTTATCTT
others(2): Show 
CTTATCTTTA
 C
C
 2 a0001c0001t0001g0060
a0001c0006t0028g0059
a0001c0001t0001g0060
a0001c0006t0028g0059
 2 HG03041.hp2
HG03516.hp2
HG03041.hp2
HG03516.hp2
 intron_variant MODIFIER c.65-9558_65-9550del
others(9): Show 
c.65-9558_65-9550delTTATTATCT
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 1/21 INFO_REALIGN_3_PRIME chrX 21416932
chrX:21417056 A
A
 G
G
 1 a0001c0001t0006g0161
a0001c0001t0006g0161
 1 HG02976.hp1
HG02976.hp1
 intron_variant MODIFIER c.65-9441A>G
c.65-9441A>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 1/21 chrX 21417056
chrX:21417172 C
C
 T
T
 1 a0001c0001t0002g0050
a0001c0001t0002g0050
 1 NA18944.hp1
NA18944.hp1
 intron_variant MODIFIER c.65-9325C>T
c.65-9325C>T
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 1/21 chrX 21417172
chrX:21417706 T
T
 C
C
 1 a0001c0001t0005g0099
a0001c0001t0005g0099
 1 NA18747.hp1
NA18747.hp1
 intron_variant MODIFIER c.65-8791T>C
c.65-8791T>C
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 1/21 chrX 21417706
chrX:21418276 G
G
 C
C
 1 a0001c0001t0002g0019
a0001c0001t0002g0019
 1 HG01106.hp1
HG01106.hp1
 intron_variant MODIFIER c.65-8221G>C
c.65-8221G>C
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 1/21 chrX 21418276
chrX:21418562 A
A
 G
G
 1 a0001c0001t0001g0094
a0001c0001t0001g0094
 1 NA18971.hp1
NA18971.hp1
 intron_variant MODIFIER c.65-7935A>G
c.65-7935A>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 1/21 chrX 21418562
chrX:21418831 T
T
 G
G
 1 a0001c0001t0002g0110
a0001c0001t0002g0110
 1 HG02074.hp1
HG02074.hp1
 intron_variant MODIFIER c.65-7666T>G
c.65-7666T>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 1/21 chrX 21418831
chrX:21418938 A
A
 G
G
 3 a0001c0001t0002g0004
a0001c0001t0003g0031
a0001c0001t0008g0005
a0001c0001t0002g0004
a0001c0001t0003g0031
a0001c0001t0008g0005
 3 HG01069.hp1
HG01071.hp1
HG02976.hp2
HG01069.hp1
HG01071.hp1
HG02976.hp2
 intron_variant MODIFIER c.65-7559A>G
c.65-7559A>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 1/21 chrX 21418938
chrX:21419623 G
G
 A
A
 1 a0001c0001t0004g0055
a0001c0001t0004g0055
 1 HG01258.hp1
HG01258.hp1
 intron_variant MODIFIER c.65-6874G>A
c.65-6874G>A
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 1/21 chrX 21419623
chrX:21419757 A
A
 G
G
 1 a0001c0001t0002g0047
a0001c0001t0002g0047
 1 NA19076.hp1
NA19076.hp1
 intron_variant MODIFIER c.65-6740A>G
c.65-6740A>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 1/21 chrX 21419757
chrX:21420245 A
A
 G
G
 1 a0001c0001t0022g0033
a0001c0001t0022g0033
 1 HG02055.hp1
HG02055.hp1
 intron_variant MODIFIER c.65-6252A>G
c.65-6252A>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 1/21 chrX 21420245
chrX:21420982 T
T
 C
C
 3 a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
 3 HG02615.hp1
HG02965.hp1
HG03471.hp1
HG02615.hp1
HG02965.hp1
HG03471.hp1
 intron_variant MODIFIER c.65-5515T>C
c.65-5515T>C
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 1/21 chrX 21420982
chrX:21421287 G
G
 GT
GT
 2 a0001c0001t0002g0115
a0001c0001t0032g0163
a0001c0001t0002g0115
a0001c0001t0032g0163
 2 NA18974.hp1
NA19063.hp1
NA18974.hp1
NA19063.hp1
 intron_variant MODIFIER c.65-5191dupT
c.65-5191dupT
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 1/21 INFO_REALIGN_3_PRIME chrX 21421287
chrX:21421287 G
G
 GTTT
GTTT
 1 a0001c0001t0042g0008
a0001c0001t0042g0008
 1 HG02647.hp1
HG02647.hp1
 intron_variant MODIFIER c.65-5193_65-5191dup
others(3): Show 
c.65-5193_65-5191dupTTT
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 1/21 INFO_REALIGN_3_PRIME chrX 21421287
chrX:21421287 GT
GT
 G
G
 10 a0001c0001t0005g0079
a0001c0001t0005g0095
a0001c0001t0005g0099
others(7): Show 
a0001c0001t0005g0079
a0001c0001t0005g0095
a0001c0001t0005g0099
a0001c0001t0006g0161
a0001c0001t0009g0013
a0001c0001t0013g0066
a0001c0001t0016g0085
a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
 10 HG01167.hp1
HG02300.hp1
HG02615.hp1
others(7): Show 
HG01167.hp1
HG02300.hp1
HG02615.hp1
HG02965.hp1
HG02976.hp1
HG03471.hp1
HG03486.hp1
NA18747.hp1
NA18960.hp1
NA18961.hp1
 intron_variant MODIFIER c.65-5191delT
c.65-5191delT
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 1/21 INFO_REALIGN_3_PRIME chrX 21421287
chrX:21421287 GTT
GTT
 G
G
 4 a0001c0001t0003g0015
a0001c0001t0011g0016
a0001c0001t0011g0017
others(1): Show 
a0001c0001t0003g0015
a0001c0001t0011g0016
a0001c0001t0011g0017
a0001c0001t0011g0138
 4 HG02717.hp1
HG03041.hp1
HG03579.hp1
others(1): Show 
HG02717.hp1
HG03041.hp1
HG03579.hp1
NA18522.hp1
 intron_variant MODIFIER c.65-5192_65-5191del
others(2): Show 
c.65-5192_65-5191delTT
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 1/21 INFO_REALIGN_3_PRIME chrX 21421287
chrX:21421431 G
G
 T
T
 4 a0001c0001t0022g0033
a0001c0003t0014g0147
a0001c0003t0014g0149
others(1): Show 
a0001c0001t0022g0033
a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
 4 HG02055.hp1
HG02615.hp1
HG02965.hp1
others(1): Show 
HG02055.hp1
HG02615.hp1
HG02965.hp1
HG03471.hp1
 intron_variant MODIFIER c.65-5066G>T
c.65-5066G>T
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 1/21 chrX 21421431
chrX:21421812 G
G
 T
T
 4 a0001c0001t0001g0039
a0001c0001t0001g0082
a0001c0001t0001g0083
others(1): Show 
a0001c0001t0001g0039
a0001c0001t0001g0082
a0001c0001t0001g0083
a0001c0001t0001g0084
 4 HG00642.hp1
HG01261.hp1
HG01928.hp1
others(1): Show 
HG00642.hp1
HG01261.hp1
HG01928.hp1
NA20300.hp1
 intron_variant MODIFIER c.65-4685G>T
c.65-4685G>T
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 1/21 chrX 21421812
chrX:21422091 C
C
 G
G
 3 a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
 3 HG02615.hp1
HG02965.hp1
HG03471.hp1
HG02615.hp1
HG02965.hp1
HG03471.hp1
 intron_variant MODIFIER c.65-4406C>G
c.65-4406C>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 1/21 chrX 21422091
chrX:21422504 A
A
 G
G
 1 a0001c0001t0022g0033
a0001c0001t0022g0033
 1 HG02055.hp1
HG02055.hp1
 intron_variant MODIFIER c.65-3993A>G
c.65-3993A>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 1/21 chrX 21422504
chrX:21422706 TC
TC
 T
T
 1 a0001c0001t0039g0144
a0001c0001t0039g0144
 1 NA19055.hp1
NA19055.hp1
 intron_variant MODIFIER c.65-3788delC
c.65-3788delC
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 1/21 INFO_REALIGN_3_PRIME chrX 21422706
chrX:21423189 A
A
 C
C
 1 a0001c0002t0005g0106
a0001c0002t0005g0106
 1 NA19079.hp1
NA19079.hp1
 intron_variant MODIFIER c.65-3308A>C
c.65-3308A>C
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 1/21 chrX 21423189
chrX:21423229 A
A
 G
G
 1 a0001c0001t0016g0032
a0001c0001t0016g0032
 1 HG02602.hp1
HG02602.hp1
 intron_variant MODIFIER c.65-3268A>G
c.65-3268A>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 1/21 chrX 21423229
chrX:21423368 A
A
 T
T
 3 a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
 3 HG02615.hp1
HG02965.hp1
HG03471.hp1
HG02615.hp1
HG02965.hp1
HG03471.hp1
 intron_variant MODIFIER c.65-3129A>T
c.65-3129A>T
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 1/21 chrX 21423368
chrX:21423723 T
T
 C
C
 3 a0001c0001t0001g0058
a0001c0001t0001g0096
a0001c0001t0030g0086
a0001c0001t0001g0058
a0001c0001t0001g0096
a0001c0001t0030g0086
 3 HG02698.hp1
HG03710.hp1
HG04199.hp1
HG02698.hp1
HG03710.hp1
HG04199.hp1
 intron_variant MODIFIER c.65-2774T>C
c.65-2774T>C
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 1/21 chrX 21423723
chrX:21423897 T
T
 G
G
 4 a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
others(1): Show 
a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
a0001c0006t0028g0059
 4 HG02615.hp1
HG02965.hp1
HG03471.hp1
others(1): Show 
HG02615.hp1
HG02965.hp1
HG03471.hp1
HG03516.hp2
 intron_variant MODIFIER c.65-2600T>G
c.65-2600T>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 1/21 chrX 21423897
chrX:21424152 A
A
 G
G
 2 a0001c0002t0001g0107
a0001c0002t0001g0108
a0001c0002t0001g0107
a0001c0002t0001g0108
 2 NA18984.hp1
NA19056.hp1
NA18984.hp1
NA19056.hp1
 intron_variant MODIFIER c.65-2345A>G
c.65-2345A>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 1/21 chrX 21424152
chrX:21424168 T
T
 C
C
 7 a0001c0001t0007g0140
a0001c0001t0020g0141
a0001c0001t0042g0008
others(4): Show 
a0001c0001t0007g0140
a0001c0001t0020g0141
a0001c0001t0042g0008
a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
a0001c0006t0028g0059
 7 HG01243.hp1
HG02615.hp1
HG02647.hp1
others(4): Show 
HG01243.hp1
HG02615.hp1
HG02647.hp1
HG02922.hp1
HG02965.hp1
HG03471.hp1
HG03516.hp2
 intron_variant MODIFIER c.65-2329T>C
c.65-2329T>C
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 1/21 chrX 21424168
chrX:21424401 C
C
 T
T
 2 a0001c0001t0007g0140
a0001c0001t0020g0141
a0001c0001t0007g0140
a0001c0001t0020g0141
 2 HG01243.hp1
HG02922.hp1
HG01243.hp1
HG02922.hp1
 intron_variant MODIFIER c.65-2096C>T
c.65-2096C>T
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 1/21 chrX 21424401
chrX:21424482 C
C
 G
G
 1 a0001c0001t0019g0014
a0001c0001t0019g0014
 1 HG01884.hp2
HG01884.hp2
 intron_variant MODIFIER c.65-2015C>G
c.65-2015C>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 1/21 chrX 21424482
chrX:21424805 T
T
 C
C
 1 a0001c0001t0003g0151
a0001c0001t0003g0151
 1 HG01081.hp2
HG01081.hp2
 intron_variant MODIFIER c.65-1692T>C
c.65-1692T>C
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 1/21 chrX 21424805
chrX:21424877 A
A
 G
G
 1 a0001c0001t0015g0098
a0001c0001t0015g0098
 1 HG01952.hp1
HG01952.hp1
 intron_variant MODIFIER c.65-1620A>G
c.65-1620A>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 1/21 chrX 21424877
chrX:21425106 ACT
ACT
 A
A
 1 a0001c0001t0003g0136
a0001c0001t0003g0136
 1 NA18965.hp1
NA18965.hp1
 intron_variant MODIFIER c.65-1381_65-1380del
others(2): Show 
c.65-1381_65-1380delTC
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 1/21 INFO_REALIGN_3_PRIME chrX 21425106
chrX:21425121 C
C
 G
G
 5 a0001c0001t0009g0010
a0001c0001t0009g0011
a0001c0001t0009g0012
others(2): Show 
a0001c0001t0009g0010
a0001c0001t0009g0011
a0001c0001t0009g0012
a0001c0001t0009g0013
a0001c0001t0041g0009
 5 HG02280.hp2
HG02572.hp1
HG02809.hp1
others(2): Show 
HG02280.hp2
HG02572.hp1
HG02809.hp1
HG03098.hp1
HG03486.hp1
 intron_variant MODIFIER c.65-1376C>G
c.65-1376C>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 1/21 chrX 21425121
chrX:21425747 A
A
 G
G
 1 a0001c0001t0031g0065
a0001c0001t0031g0065
 1 HG02040.hp1
HG02040.hp1
 intron_variant MODIFIER c.65-750A>G
c.65-750A>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 1/21 chrX 21425747
chrX:21425934 A
A
 G
G
 5 a0001c0001t0020g0141
a0001c0003t0014g0147
a0001c0003t0014g0149
others(2): Show 
a0001c0001t0020g0141
a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
a0001c0006t0028g0059
 5 HG01243.hp1
HG02615.hp1
HG02965.hp1
others(2): Show 
HG01243.hp1
HG02615.hp1
HG02965.hp1
HG03471.hp1
HG03516.hp2
 intron_variant MODIFIER c.65-563A>G
c.65-563A>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 1/21 chrX 21425934
chrX:21426336 C
C
 G
G
 1 a0001c0001t0012g0045
a0001c0001t0012g0045
 1 HG02145.hp1
HG02145.hp1
 intron_variant MODIFIER c.65-161C>G
c.65-161C>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 1/21 chrX 21426336
chrX:21426358 C
C
 T
T
 4 a0001c0001t0003g0015
a0001c0001t0011g0016
a0001c0001t0011g0017
others(1): Show 
a0001c0001t0003g0015
a0001c0001t0011g0016
a0001c0001t0011g0017
a0001c0001t0011g0138
 4 HG02717.hp1
HG03041.hp1
HG03579.hp1
others(1): Show 
HG02717.hp1
HG03041.hp1
HG03579.hp1
NA18522.hp1
 intron_variant MODIFIER c.65-139C>T
c.65-139C>T
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 1/21 chrX 21426358
chrX:21426730 TCTC
TCTC
 T
T
 3 a0001c0001t0001g0062
a0001c0001t0001g0075
a0001c0001t0001g0076
a0001c0001t0001g0062
a0001c0001t0001g0075
a0001c0001t0001g0076
 3 NA18948.hp1
NA18982.hp1
NA18988.hp1
NA18948.hp1
NA18982.hp1
NA18988.hp1
 intron_variant MODIFIER c.228+74_228+76delCT
others(1): Show 
c.228+74_228+76delCTC
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 2/21 INFO_REALIGN_3_PRIME chrX 21426730
chrX:21426734 C
C
 T
T
 69 a0001c0001t0001g0158
a0001c0001t0002g0004
a0001c0001t0002g0019
others(66): Show 
a0001c0001t0001g0158
a0001c0001t0002g0004
a0001c0001t0002g0019
a0001c0001t0002g0028
a0001c0001t0002g0043
a0001c0001t0002g0046
a0001c0001t0002g0047
a0001c0001t0002g0049
a0001c0001t0002g0050
a0001c0001t0002g0110
a0001c0001t0002g0111
a0001c0001t0002g0112
a0001c0001t0002g0113
a0001c0001t0002g0114
a0001c0001t0002g0118
a0001c0001t0002g0119
a0001c0001t0002g0120
a0001c0001t0002g0121
a0001c0001t0002g0122
a0001c0001t0002g0125
a0001c0001t0002g0126
a0001c0001t0003g0015
a0001c0001t0003g0024
a0001c0001t0003g0029
a0001c0001t0003g0031
a0001c0001t0003g0151
a0001c0001t0006g0155
a0001c0001t0006g0157
a0001c0001t0006g0159
a0001c0001t0006g0160
a0001c0001t0006g0161
a0001c0001t0007g0140
a0001c0001t0008g0005
a0001c0001t0008g0135
a0001c0001t0008g0143
a0001c0001t0009g0010
a0001c0001t0009g0011
a0001c0001t0009g0012
a0001c0001t0009g0013
a0001c0001t0010g0152
a0001c0001t0010g0153
a0001c0001t0010g0162
a0001c0001t0011g0016
a0001c0001t0011g0017
a0001c0001t0011g0138
a0001c0001t0012g0025
a0001c0001t0012g0045
a0001c0001t0012g0142
a0001c0001t0017g0018
a0001c0001t0017g0146
a0001c0001t0019g0014
a0001c0001t0020g0141
a0001c0001t0022g0033
a0001c0001t0023g0006
a0001c0001t0024g0156
a0001c0001t0027g0034
a0001c0001t0038g0150
a0001c0001t0039g0144
a0001c0001t0040g0027
a0001c0001t0041g0009
a0001c0001t0042g0008
a0001c0001t0043g0007
a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
a0001c0006t0028g0059
a0001c0007t0036g0026
a0002c0005t0003g0030
a0003c0004t0006g0154
 69 HG00140.hp1
HG00735.hp1
HG00741.hp2
others(66): Show 
HG00140.hp1
HG00735.hp1
HG00741.hp2
HG01069.hp1
HG01071.hp1
HG01071.hp2
HG01081.hp1
HG01081.hp2
HG01106.hp1
HG01109.hp1
HG01243.hp1
HG01433.hp1
HG01884.hp1
HG01884.hp2
HG02055.hp1
HG02074.hp1
HG02083.hp1
HG02145.hp1
HG02258.hp1
HG02280.hp1
HG02280.hp2
HG02486.hp1
HG02572.hp1
HG02615.hp1
HG02615.hp2
HG02647.hp1
HG02717.hp1
HG02809.hp1
HG02809.hp2
HG02886.hp1
HG02886.hp2
HG02895.hp1
HG02922.hp1
HG02922.hp2
HG02965.hp1
HG02976.hp1
HG02976.hp2
HG03041.hp1
HG03098.hp1
HG03130.hp1
HG03139.hp1
HG03209.hp1
HG03225.hp1
HG03471.hp1
HG03486.hp1
HG03486.hp2
HG03491.hp2
HG03516.hp1
HG03516.hp2
HG03579.hp1
HG03654.hp1
NA18522.hp1
NA18612.hp1
NA18943.hp1
NA18944.hp1
NA18966.hp1
NA18986.hp1
NA18990.hp1
NA19000.hp1
NA19004.hp1
NA19043.hp1
NA19055.hp1
NA19070.hp1
NA19076.hp1
NA19086.hp1
NA19091.hp1
NA19240.hp1
NA19240.hp2
NA20300.hp2
 intron_variant MODIFIER c.228+74C>T
c.228+74C>T
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 2/21 chrX 21426734
chrX:21426747 C
C
 T
T
 36 a0001c0001t0001g0158
a0001c0001t0002g0028
a0001c0001t0003g0015
others(33): Show 
a0001c0001t0001g0158
a0001c0001t0002g0028
a0001c0001t0003g0015
a0001c0001t0003g0024
a0001c0001t0003g0029
a0001c0001t0006g0155
a0001c0001t0006g0157
a0001c0001t0006g0159
a0001c0001t0006g0160
a0001c0001t0006g0161
a0001c0001t0007g0140
a0001c0001t0009g0010
a0001c0001t0009g0011
a0001c0001t0009g0012
a0001c0001t0009g0013
a0001c0001t0010g0152
a0001c0001t0010g0153
a0001c0001t0010g0162
a0001c0001t0011g0016
a0001c0001t0011g0017
a0001c0001t0011g0138
a0001c0001t0012g0025
a0001c0001t0017g0018
a0001c0001t0017g0146
a0001c0001t0020g0141
a0001c0001t0024g0156
a0001c0001t0038g0150
a0001c0001t0040g0027
a0001c0001t0041g0009
a0001c0001t0043g0007
a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
a0001c0006t0028g0059
a0001c0007t0036g0026
a0003c0004t0006g0154
 36 HG01071.hp2
HG01081.hp1
HG01109.hp1
others(33): Show 
HG01071.hp2
HG01081.hp1
HG01109.hp1
HG01243.hp1
HG01884.hp1
HG02258.hp1
HG02280.hp1
HG02280.hp2
HG02572.hp1
HG02615.hp1
HG02615.hp2
HG02717.hp1
HG02809.hp1
HG02886.hp1
HG02895.hp1
HG02922.hp1
HG02922.hp2
HG02965.hp1
HG02976.hp1
HG03041.hp1
HG03098.hp1
HG03130.hp1
HG03209.hp1
HG03225.hp1
HG03471.hp1
HG03486.hp1
HG03486.hp2
HG03491.hp2
HG03516.hp1
HG03516.hp2
HG03579.hp1
NA18522.hp1
NA19043.hp1
NA19240.hp1
NA19240.hp2
NA20300.hp2
 intron_variant MODIFIER c.228+87C>T
c.228+87C>T
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 2/21 chrX 21426747
chrX:21426772 T
T
 C
C
 37 a0001c0001t0001g0158
a0001c0001t0002g0028
a0001c0001t0003g0015
others(34): Show 
a0001c0001t0001g0158
a0001c0001t0002g0028
a0001c0001t0003g0015
a0001c0001t0003g0024
a0001c0001t0003g0029
a0001c0001t0006g0155
a0001c0001t0006g0157
a0001c0001t0006g0159
a0001c0001t0006g0160
a0001c0001t0006g0161
a0001c0001t0007g0140
a0001c0001t0009g0010
a0001c0001t0009g0011
a0001c0001t0009g0012
a0001c0001t0009g0013
a0001c0001t0010g0152
a0001c0001t0010g0153
a0001c0001t0010g0162
a0001c0001t0011g0016
a0001c0001t0011g0017
a0001c0001t0011g0138
a0001c0001t0012g0025
a0001c0001t0017g0018
a0001c0001t0017g0146
a0001c0001t0020g0141
a0001c0001t0023g0006
a0001c0001t0024g0156
a0001c0001t0038g0150
a0001c0001t0040g0027
a0001c0001t0041g0009
a0001c0001t0043g0007
a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
a0001c0006t0028g0059
a0001c0007t0036g0026
a0003c0004t0006g0154
 37 HG01071.hp2
HG01081.hp1
HG01109.hp1
others(34): Show 
HG01071.hp2
HG01081.hp1
HG01109.hp1
HG01243.hp1
HG01884.hp1
HG02258.hp1
HG02280.hp1
HG02280.hp2
HG02572.hp1
HG02615.hp1
HG02615.hp2
HG02717.hp1
HG02809.hp1
HG02886.hp1
HG02895.hp1
HG02922.hp1
HG02922.hp2
HG02965.hp1
HG02976.hp1
HG03041.hp1
HG03098.hp1
HG03130.hp1
HG03209.hp1
HG03225.hp1
HG03471.hp1
HG03486.hp1
HG03486.hp2
HG03491.hp2
HG03516.hp1
HG03516.hp2
HG03579.hp1
HG03654.hp1
NA18522.hp1
NA19043.hp1
NA19240.hp1
NA19240.hp2
NA20300.hp2
 intron_variant MODIFIER c.228+112T>C
c.228+112T>C
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 2/21 chrX 21426772
chrX:21427080 A
A
 T
T
 1 a0001c0001t0002g0003
a0001c0001t0002g0003
 1 HG00621.hp1
HG00621.hp1
 intron_variant MODIFIER c.228+420A>T
c.228+420A>T
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 2/21 chrX 21427080
chrX:21427195 T
T
 G
G
 2 a0001c0001t0003g0061
a0001c0001t0025g0130
a0001c0001t0003g0061
a0001c0001t0025g0130
 2 NA18970.hp1
NA19062.hp1
NA18970.hp1
NA19062.hp1
 intron_variant MODIFIER c.228+535T>G
c.228+535T>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 2/21 chrX 21427195
chrX:21427273 A
A
 G
G
 1 a0001c0001t0031g0065
a0001c0001t0031g0065
 1 HG02040.hp1
HG02040.hp1
 intron_variant MODIFIER c.228+613A>G
c.228+613A>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 2/21 chrX 21427273
chrX:21427297 A
A
 G
G
 2 a0001c0001t0023g0006
a0001c0001t0043g0007
a0001c0001t0023g0006
a0001c0001t0043g0007
 2 HG03491.hp2
HG03654.hp1
HG03491.hp2
HG03654.hp1
 intron_variant MODIFIER c.228+637A>G
c.228+637A>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 2/21 chrX 21427297
chrX:21427601 C
C
 T
T
 4 a0001c0001t0003g0015
a0001c0001t0011g0016
a0001c0001t0011g0017
others(1): Show 
a0001c0001t0003g0015
a0001c0001t0011g0016
a0001c0001t0011g0017
a0001c0001t0011g0138
 4 HG02717.hp1
HG03041.hp1
HG03579.hp1
others(1): Show 
HG02717.hp1
HG03041.hp1
HG03579.hp1
NA18522.hp1
 intron_variant MODIFIER c.228+941C>T
c.228+941C>T
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 2/21 chrX 21427601
chrX:21427881 A
A
 G
G
 9 a0001c0001t0002g0028
a0001c0001t0003g0024
a0001c0001t0003g0029
others(6): Show 
a0001c0001t0002g0028
a0001c0001t0003g0024
a0001c0001t0003g0029
a0001c0001t0012g0025
a0001c0001t0017g0146
a0001c0001t0038g0150
a0001c0001t0040g0027
a0001c0007t0036g0026
a0002c0005t0003g0030
 9 HG01081.hp1
HG01109.hp1
HG02258.hp1
others(6): Show 
HG01081.hp1
HG01109.hp1
HG02258.hp1
HG02280.hp1
HG02886.hp2
HG02895.hp1
HG03486.hp2
NA19043.hp1
NA19240.hp1
 intron_variant MODIFIER c.228+1221A>G
c.228+1221A>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 2/21 chrX 21427881
chrX:21428209 A
A
 G
G
 1 a0001c0001t0004g0057
a0001c0001t0004g0057
 1 homoSapiens_chm13v2.hp1
homoSapiens_chm13v2.hp1
 intron_variant MODIFIER c.228+1549A>G
c.228+1549A>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 2/21 chrX 21428209
chrX:21428532 A
A
 G
G
 1 a0001c0001t0012g0045
a0001c0001t0012g0045
 1 HG02145.hp1
HG02145.hp1
 intron_variant MODIFIER c.228+1872A>G
c.228+1872A>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 2/21 chrX 21428532
chrX:21428578 A
A
 G
G
 1 a0001c0001t0001g0069
a0001c0001t0001g0069
 1 NA19085.hp1
NA19085.hp1
 intron_variant MODIFIER c.228+1918A>G
c.228+1918A>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 2/21 chrX 21428578
chrX:21428926 T
T
 C
C
 1 a0001c0001t0023g0006
a0001c0001t0023g0006
 1 HG03654.hp1
HG03654.hp1
 intron_variant MODIFIER c.228+2266T>C
c.228+2266T>C
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 2/21 chrX 21428926
chrX:21429349 A
A
 G
G
 2 a0001c0001t0001g0134
a0001c0001t0003g0133
a0001c0001t0001g0134
a0001c0001t0003g0133
 2 HG02071.hp1
NA18953.hp1
HG02071.hp1
NA18953.hp1
 intron_variant MODIFIER c.228+2689A>G
c.228+2689A>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 2/21 chrX 21429349
chrX:21429813 G
G
 T
T
 3 a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
 3 HG02615.hp1
HG02965.hp1
HG03471.hp1
HG02615.hp1
HG02965.hp1
HG03471.hp1
 intron_variant MODIFIER c.229-2799G>T
c.229-2799G>T
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 2/21 chrX 21429813
chrX:21429990 G
G
 T
T
 1 a0001c0001t0001g0075
a0001c0001t0001g0075
 1 NA18948.hp1
NA18948.hp1
 intron_variant MODIFIER c.229-2622G>T
c.229-2622G>T
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 2/21 chrX 21429990
chrX:21430030 A
A
 T
T
 1 a0001c0001t0019g0014
a0001c0001t0019g0014
 1 HG01884.hp2
HG01884.hp2
 intron_variant MODIFIER c.229-2582A>T
c.229-2582A>T
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 2/21 chrX 21430030
chrX:21430426 T
T
 G
G
 3 a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
 3 HG02615.hp1
HG02965.hp1
HG03471.hp1
HG02615.hp1
HG02965.hp1
HG03471.hp1
 intron_variant MODIFIER c.229-2186T>G
c.229-2186T>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 2/21 chrX 21430426
chrX:21430639 A
A
 G
G
 1 a0001c0001t0007g0140
a0001c0001t0007g0140
 1 HG02922.hp1
HG02922.hp1
 intron_variant MODIFIER c.229-1973A>G
c.229-1973A>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 2/21 chrX 21430639
chrX:21431172 T
T
 C
C
 4 a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
others(1): Show 
a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
a0001c0006t0028g0059
 4 HG02615.hp1
HG02965.hp1
HG03471.hp1
others(1): Show 
HG02615.hp1
HG02965.hp1
HG03471.hp1
HG03516.hp2
 intron_variant MODIFIER c.229-1440T>C
c.229-1440T>C
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 2/21 chrX 21431172
chrX:21431687 C
C
 T
T
 12 a0001c0001t0001g0039
a0001c0001t0001g0082
a0001c0001t0001g0083
others(9): Show 
a0001c0001t0001g0039
a0001c0001t0001g0082
a0001c0001t0001g0083
a0001c0001t0001g0084
a0001c0002t0001g0042
a0001c0002t0001g0104
a0001c0002t0001g0105
a0001c0002t0001g0107
a0001c0002t0001g0108
a0001c0002t0005g0106
a0001c0002t0007g0040
a0001c0002t0007g0041
 12 HG00642.hp1
HG01261.hp1
HG01928.hp1
others(9): Show 
HG00642.hp1
HG01261.hp1
HG01928.hp1
HG01934.hp1
HG01943.hp1
HG02027.hp1
HG02129.hp1
NA18977.hp1
NA18984.hp1
NA19056.hp1
NA19079.hp1
NA20300.hp1
 intron_variant MODIFIER c.229-925C>T
c.229-925C>T
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 2/21 chrX 21431687
chrX:21431696 A
A
 T
T
 1 a0001c0001t0013g0066
a0001c0001t0013g0066
 1 HG01167.hp1
HG01167.hp1
 intron_variant MODIFIER c.229-916A>T
c.229-916A>T
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 2/21 chrX 21431696
chrX:21432337 A
A
 C
C
 1 a0001c0001t0042g0008
a0001c0001t0042g0008
 1 HG02647.hp1
HG02647.hp1
 intron_variant MODIFIER c.229-275A>C
c.229-275A>C
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 2/21 chrX 21432337
chrX:21432472 G
G
 A
A
 1 a0001c0001t0020g0141
a0001c0001t0020g0141
 1 HG01243.hp1
HG01243.hp1
 intron_variant MODIFIER c.229-140G>A
c.229-140G>A
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 2/21 chrX 21432472
chrX:21432909 G
G
 A
A
 1 a0001c0001t0042g0008
a0001c0001t0042g0008
 1 HG02647.hp1
HG02647.hp1
 intron_variant MODIFIER c.431+95G>A
c.431+95G>A
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 3/21 chrX 21432909
chrX:21433077 G
G
 A
A
 1 a0001c0001t0003g0151
a0001c0001t0003g0151
 1 HG01081.hp2
HG01081.hp2
 intron_variant MODIFIER c.431+263G>A
c.431+263G>A
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 3/21 chrX 21433077
chrX:21433550 C
C
 T
T
 1 a0001c0001t0042g0008
a0001c0001t0042g0008
 1 HG02647.hp1
HG02647.hp1
 intron_variant MODIFIER c.431+736C>T
c.431+736C>T
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 3/21 chrX 21433550
chrX:21433653 T
T
 TAC
TAC
 13 a0001c0001t0001g0001
a0001c0001t0001g0051
a0001c0001t0001g0075
others(10): Show 
a0001c0001t0001g0001
a0001c0001t0001g0051
a0001c0001t0001g0075
a0001c0001t0001g0082
a0001c0001t0001g0087
a0001c0001t0004g0132
a0001c0001t0009g0010
a0001c0001t0012g0142
a0001c0001t0013g0066
a0001c0001t0016g0032
a0001c0001t0017g0018
a0001c0001t0024g0156
a0002c0005t0003g0030
 13 HG01071.hp2
HG01074.hp1
HG01167.hp1
others(10): Show 
HG01071.hp2
HG01074.hp1
HG01167.hp1
HG01928.hp1
HG02280.hp2
HG02602.hp1
HG02886.hp2
HG03139.hp1
NA18948.hp1
NA19068.hp1
NA20300.hp2
NA20752.hp1
NA20905.hp1
 intron_variant MODIFIER c.431+880_431+881dup
others(2): Show 
c.431+880_431+881dupAC
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 3/21 INFO_REALIGN_3_PRIME chrX 21433653
chrX:21433653 T
T
 TACAC
TACAC
 3 a0001c0001t0001g0062
a0001c0001t0019g0014
a0001c0001t0041g0009
a0001c0001t0001g0062
a0001c0001t0019g0014
a0001c0001t0041g0009
 3 HG01884.hp2
HG03098.hp1
NA18988.hp1
HG01884.hp2
HG03098.hp1
NA18988.hp1
 intron_variant MODIFIER c.431+878_431+881dup
others(4): Show 
c.431+878_431+881dupACAC
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 3/21 INFO_REALIGN_3_PRIME chrX 21433653
chrX:21433653 T
T
 TACACAC
TACACAC
 2 a0001c0001t0001g0076
a0001c0001t0009g0013
a0001c0001t0001g0076
a0001c0001t0009g0013
 2 HG03486.hp1
NA18982.hp1
HG03486.hp1
NA18982.hp1
 intron_variant MODIFIER c.431+876_431+881dup
others(6): Show 
c.431+876_431+881dupACACAC
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 3/21 INFO_REALIGN_3_PRIME chrX 21433653
chrX:21433653 T
T
 TACACACA
others(1): Show 
TACACACAC
 1 a0001c0001t0009g0012
a0001c0001t0009g0012
 1 HG02572.hp1
HG02572.hp1
 intron_variant MODIFIER c.431+874_431+881dup
others(8): Show 
c.431+874_431+881dupACACACAC
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 3/21 INFO_REALIGN_3_PRIME chrX 21433653
chrX:21433653 T
T
 TACACACA
others(3): Show 
TACACACACAC
 2 a0001c0001t0009g0011
a0001c0001t0042g0008
a0001c0001t0009g0011
a0001c0001t0042g0008
 2 HG02647.hp1
HG02809.hp1
HG02647.hp1
HG02809.hp1
 intron_variant MODIFIER c.431+872_431+881dup
others(10): Show 
c.431+872_431+881dupACACACACAC
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 3/21 INFO_REALIGN_3_PRIME chrX 21433653
chrX:21433653 TAC
TAC
 T
T
 16 a0001c0001t0001g0060
a0001c0001t0001g0071
a0001c0001t0001g0077
others(13): Show 
a0001c0001t0001g0060
a0001c0001t0001g0071
a0001c0001t0001g0077
a0001c0001t0001g0093
a0001c0001t0001g0128
a0001c0001t0001g0145
a0001c0001t0003g0024
a0001c0001t0003g0151
a0001c0001t0005g0063
a0001c0001t0005g0072
a0001c0001t0006g0155
a0001c0001t0006g0160
a0001c0001t0032g0163
a0001c0001t0043g0007
a0001c0002t0005g0106
a0003c0004t0006g0154
 16 HG00735.hp2
HG01081.hp2
HG01884.hp1
others(13): Show 
HG00735.hp2
HG01081.hp2
HG01884.hp1
HG02280.hp1
HG02615.hp2
HG02922.hp2
HG03041.hp2
HG03491.hp2
NA18945.hp1
NA18962.hp1
NA19058.hp1
NA19063.hp1
NA19066.hp1
NA19079.hp1
NA19082.hp1
NA20805.hp1
 intron_variant MODIFIER c.431+880_431+881del
others(2): Show 
c.431+880_431+881delAC
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 3/21 INFO_REALIGN_3_PRIME chrX 21433653
chrX:21433653 TACAC
TACAC
 T
T
 6 a0001c0001t0001g0053
a0001c0001t0002g0118
a0001c0001t0002g0119
others(3): Show 
a0001c0001t0001g0053
a0001c0001t0002g0118
a0001c0001t0002g0119
a0001c0001t0002g0122
a0001c0001t0022g0033
a0001c0001t0027g0034
 6 HG00280.hp1
HG02055.hp1
HG02486.hp1
others(3): Show 
HG00280.hp1
HG02055.hp1
HG02486.hp1
NA18966.hp1
NA19070.hp1
NA19086.hp1
 intron_variant MODIFIER c.431+878_431+881del
others(4): Show 
c.431+878_431+881delACAC
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 3/21 INFO_REALIGN_3_PRIME chrX 21433653
chrX:21433653 TACACAC
TACACAC
 T
T
 1 a0001c0001t0002g0019
a0001c0001t0002g0019
 1 HG01106.hp1
HG01106.hp1
 intron_variant MODIFIER c.431+876_431+881del
others(6): Show 
c.431+876_431+881delACACAC
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 3/21 INFO_REALIGN_3_PRIME chrX 21433653
chrX:21434139 G
G
 A
A
 69 a0001c0001t0001g0158
a0001c0001t0002g0003
a0001c0001t0002g0004
others(66): Show 
a0001c0001t0001g0158
a0001c0001t0002g0003
a0001c0001t0002g0004
a0001c0001t0002g0019
a0001c0001t0002g0028
a0001c0001t0002g0046
a0001c0001t0002g0047
a0001c0001t0002g0049
a0001c0001t0002g0050
a0001c0001t0002g0110
a0001c0001t0002g0111
a0001c0001t0002g0112
a0001c0001t0002g0113
a0001c0001t0002g0114
a0001c0001t0002g0118
a0001c0001t0002g0119
a0001c0001t0002g0120
a0001c0001t0002g0121
a0001c0001t0002g0122
a0001c0001t0002g0125
a0001c0001t0002g0126
a0001c0001t0003g0015
a0001c0001t0003g0024
a0001c0001t0003g0029
a0001c0001t0003g0031
a0001c0001t0003g0151
a0001c0001t0006g0155
a0001c0001t0006g0157
a0001c0001t0006g0159
a0001c0001t0006g0160
a0001c0001t0006g0161
a0001c0001t0007g0140
a0001c0001t0008g0005
a0001c0001t0008g0124
a0001c0001t0008g0135
a0001c0001t0008g0143
a0001c0001t0009g0010
a0001c0001t0009g0011
a0001c0001t0009g0012
a0001c0001t0009g0013
a0001c0001t0010g0152
a0001c0001t0010g0153
a0001c0001t0010g0162
a0001c0001t0011g0016
a0001c0001t0011g0017
a0001c0001t0011g0138
a0001c0001t0012g0025
a0001c0001t0012g0045
a0001c0001t0012g0142
a0001c0001t0017g0018
a0001c0001t0017g0146
a0001c0001t0019g0014
a0001c0001t0020g0141
a0001c0001t0022g0033
a0001c0001t0023g0006
a0001c0001t0024g0156
a0001c0001t0027g0034
a0001c0001t0038g0150
a0001c0001t0039g0144
a0001c0001t0040g0027
a0001c0001t0041g0009
a0001c0001t0042g0008
a0001c0001t0043g0007
a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
a0001c0007t0036g0026
a0002c0005t0003g0030
a0003c0004t0006g0154
 69 HG00140.hp1
HG00621.hp1
HG00735.hp1
others(66): Show 
HG00140.hp1
HG00621.hp1
HG00735.hp1
HG00741.hp2
HG01069.hp1
HG01071.hp1
HG01071.hp2
HG01081.hp1
HG01081.hp2
HG01106.hp1
HG01109.hp1
HG01243.hp1
HG01433.hp1
HG01884.hp1
HG01884.hp2
HG02055.hp1
HG02074.hp1
HG02083.hp1
HG02145.hp1
HG02258.hp1
HG02280.hp1
HG02280.hp2
HG02486.hp1
HG02572.hp1
HG02615.hp1
HG02615.hp2
HG02647.hp1
HG02717.hp1
HG02809.hp1
HG02886.hp1
HG02886.hp2
HG02895.hp1
HG02922.hp1
HG02922.hp2
HG02965.hp1
HG02976.hp1
HG02976.hp2
HG03041.hp1
HG03098.hp1
HG03130.hp1
HG03139.hp1
HG03209.hp1
HG03225.hp1
HG03471.hp1
HG03486.hp1
HG03486.hp2
HG03491.hp2
HG03516.hp1
HG03579.hp1
HG03654.hp1
NA18522.hp1
NA18612.hp1
NA18943.hp1
NA18944.hp1
NA18966.hp1
NA18986.hp1
NA18990.hp1
NA19000.hp1
NA19004.hp1
NA19012.hp1
NA19043.hp1
NA19055.hp1
NA19070.hp1
NA19076.hp1
NA19086.hp1
NA19091.hp1
NA19240.hp1
NA19240.hp2
NA20300.hp2
 intron_variant MODIFIER c.431+1325G>A
c.431+1325G>A
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 3/21 chrX 21434139
chrX:21434183 C
C
 T
T
 1 a0001c0007t0036g0026
a0001c0007t0036g0026
 1 HG01081.hp1
HG01081.hp1
 intron_variant MODIFIER c.431+1369C>T
c.431+1369C>T
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 3/21 chrX 21434183
chrX:21434634 T
T
 G
G
 9 a0001c0001t0002g0028
a0001c0001t0003g0024
a0001c0001t0003g0029
others(6): Show 
a0001c0001t0002g0028
a0001c0001t0003g0024
a0001c0001t0003g0029
a0001c0001t0012g0025
a0001c0001t0017g0146
a0001c0001t0038g0150
a0001c0001t0040g0027
a0001c0007t0036g0026
a0002c0005t0003g0030
 9 HG01081.hp1
HG01109.hp1
HG02258.hp1
others(6): Show 
HG01081.hp1
HG01109.hp1
HG02258.hp1
HG02280.hp1
HG02886.hp2
HG02895.hp1
HG03486.hp2
NA19043.hp1
NA19240.hp1
 intron_variant MODIFIER c.431+1820T>G
c.431+1820T>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 3/21 chrX 21434634
chrX:21435382 T
T
 A
A
 5 a0001c0001t0009g0010
a0001c0001t0009g0011
a0001c0001t0009g0012
others(2): Show 
a0001c0001t0009g0010
a0001c0001t0009g0011
a0001c0001t0009g0012
a0001c0001t0009g0013
a0001c0001t0041g0009
 5 HG02280.hp2
HG02572.hp1
HG02809.hp1
others(2): Show 
HG02280.hp2
HG02572.hp1
HG02809.hp1
HG03098.hp1
HG03486.hp1
 intron_variant MODIFIER c.431+2568T>A
c.431+2568T>A
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 3/21 chrX 21435382
chrX:21435743 T
T
 C
C
 1 a0001c0001t0002g0050
a0001c0001t0002g0050
 1 NA18944.hp1
NA18944.hp1
 intron_variant MODIFIER c.431+2929T>C
c.431+2929T>C
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 3/21 chrX 21435743
chrX:21436044 C
C
 A
A
 4 a0001c0001t0042g0008
a0001c0003t0014g0147
a0001c0003t0014g0149
others(1): Show 
a0001c0001t0042g0008
a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
 4 HG02615.hp1
HG02647.hp1
HG02965.hp1
others(1): Show 
HG02615.hp1
HG02647.hp1
HG02965.hp1
HG03471.hp1
 intron_variant MODIFIER c.431+3230C>A
c.431+3230C>A
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 3/21 chrX 21436044
chrX:21436171 C
C
 T
T
 1 a0001c0001t0012g0045
a0001c0001t0012g0045
 1 HG02145.hp1
HG02145.hp1
 intron_variant MODIFIER c.431+3357C>T
c.431+3357C>T
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 3/21 chrX 21436171
chrX:21436358 A
A
 G
G
 1 a0001c0001t0002g0118
a0001c0001t0002g0118
 1 NA19086.hp1
NA19086.hp1
 intron_variant MODIFIER c.431+3544A>G
c.431+3544A>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 3/21 chrX 21436358
chrX:21436558 T
T
 C
C
 1 a0001c0001t0023g0006
a0001c0001t0023g0006
 1 HG03654.hp1
HG03654.hp1
 intron_variant MODIFIER c.431+3744T>C
c.431+3744T>C
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 3/21 chrX 21436558
chrX:21437392 C
C
 G
G
 1 a0001c0001t0012g0045
a0001c0001t0012g0045
 1 HG02145.hp1
HG02145.hp1
 intron_variant MODIFIER c.432-3302C>G
c.432-3302C>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 3/21 chrX 21437392
chrX:21437419 G
G
 GT
GT
 17 a0001c0001t0001g0081
a0001c0001t0001g0109
a0001c0001t0001g0158
others(14): Show 
a0001c0001t0001g0081
a0001c0001t0001g0109
a0001c0001t0001g0158
a0001c0001t0002g0003
a0001c0001t0002g0118
a0001c0001t0003g0136
a0001c0001t0004g0056
a0001c0001t0004g0064
a0001c0001t0006g0159
a0001c0001t0012g0045
a0001c0001t0013g0100
a0001c0001t0020g0141
a0001c0001t0022g0033
a0001c0001t0024g0156
a0001c0001t0027g0034
a0001c0001t0037g0092
a0001c0006t0028g0059
 17 HG00621.hp1
HG00738.hp1
HG00741.hp1
others(14): Show 
HG00621.hp1
HG00738.hp1
HG00741.hp1
HG01243.hp1
HG02055.hp1
HG02145.hp1
HG02486.hp1
HG02738.hp1
HG02886.hp1
HG03516.hp1
HG03516.hp2
HG04204.hp1
NA18955.hp1
NA18965.hp1
NA19086.hp1
NA19089.hp1
NA20300.hp2
 intron_variant MODIFIER c.432-3255dupT
c.432-3255dupT
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 3/21 INFO_REALIGN_3_PRIME chrX 21437419
chrX:21437419 G
G
 GTT
GTT
 1 a0001c0001t0042g0008
a0001c0001t0042g0008
 1 HG02647.hp1
HG02647.hp1
 intron_variant MODIFIER c.432-3256_432-3255d
others(4): Show 
c.432-3256_432-3255dupTT
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 3/21 INFO_REALIGN_3_PRIME chrX 21437419
chrX:21437419 GT
GT
 G
G
 8 a0001c0001t0001g0071
a0001c0001t0003g0116
a0001c0001t0004g0117
others(5): Show 
a0001c0001t0001g0071
a0001c0001t0003g0116
a0001c0001t0004g0117
a0001c0001t0005g0063
a0001c0001t0005g0072
a0001c0001t0012g0142
a0001c0001t0032g0163
a0002c0005t0003g0030
 8 HG02015.hp1
HG02886.hp2
HG03017.hp1
others(5): Show 
HG02015.hp1
HG02886.hp2
HG03017.hp1
HG03139.hp1
NA18945.hp1
NA18962.hp1
NA19058.hp1
NA19063.hp1
 intron_variant MODIFIER c.432-3255delT
c.432-3255delT
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 3/21 INFO_REALIGN_3_PRIME chrX 21437419
chrX:21437551 C
C
 G
G
 3 a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
 3 HG02615.hp1
HG02965.hp1
HG03471.hp1
HG02615.hp1
HG02965.hp1
HG03471.hp1
 intron_variant MODIFIER c.432-3143C>G
c.432-3143C>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 3/21 chrX 21437551
chrX:21437609 G
G
 A
A
 1 a0001c0001t0003g0031
a0001c0001t0003g0031
 1 HG02976.hp2
HG02976.hp2
 intron_variant MODIFIER c.432-3085G>A
c.432-3085G>A
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 3/21 chrX 21437609
chrX:21437715 G
G
 A
A
 1 a0001c0001t0001g0093
a0001c0001t0001g0093
 1 NA20805.hp1
NA20805.hp1
 intron_variant MODIFIER c.432-2979G>A
c.432-2979G>A
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 3/21 chrX 21437715
chrX:21437751 G
G
 T
T
 1 a0001c0001t0012g0045
a0001c0001t0012g0045
 1 HG02145.hp1
HG02145.hp1
 intron_variant MODIFIER c.432-2943G>T
c.432-2943G>T
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 3/21 chrX 21437751
chrX:21438097 T
T
 A
A
 1 a0001c0001t0035g0054
a0001c0001t0035g0054
 1 NA18967.hp1
NA18967.hp1
 intron_variant MODIFIER c.432-2597T>A
c.432-2597T>A
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 3/21 chrX 21438097
chrX:21438098 G
G
 C
C
 1 a0001c0001t0035g0054
a0001c0001t0035g0054
 1 NA18967.hp1
NA18967.hp1
 intron_variant MODIFIER c.432-2596G>C
c.432-2596G>C
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 3/21 chrX 21438098
chrX:21438100 T
T
 C
C
 1 a0001c0001t0035g0054
a0001c0001t0035g0054
 1 NA18967.hp1
NA18967.hp1
 intron_variant MODIFIER c.432-2594T>C
c.432-2594T>C
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 3/21 chrX 21438100
chrX:21438101 A
A
 T
T
 1 a0001c0001t0035g0054
a0001c0001t0035g0054
 1 NA18967.hp1
NA18967.hp1
 intron_variant MODIFIER c.432-2593A>T
c.432-2593A>T
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 3/21 chrX 21438101
chrX:21438102 AG
AG
 A
A
 1 a0001c0001t0035g0054
a0001c0001t0035g0054
 1 NA18967.hp1
NA18967.hp1
 intron_variant MODIFIER c.432-2590delG
c.432-2590delG
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 3/21 INFO_REALIGN_3_PRIME chrX 21438102
chrX:21438107 T
T
 C
C
 1 a0001c0001t0035g0054
a0001c0001t0035g0054
 1 NA18967.hp1
NA18967.hp1
 intron_variant MODIFIER c.432-2587T>C
c.432-2587T>C
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 3/21 chrX 21438107
chrX:21438108 G
G
 GC
GC
 1 a0001c0001t0035g0054
a0001c0001t0035g0054
 1 NA18967.hp1
NA18967.hp1
 intron_variant MODIFIER c.432-2586_432-2585i
others(3): Show 
c.432-2586_432-2585insC
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 3/21 chrX 21438108
chrX:21438110 C
C
 T
T
 1 a0001c0001t0035g0054
a0001c0001t0035g0054
 1 NA18967.hp1
NA18967.hp1
 intron_variant MODIFIER c.432-2584C>T
c.432-2584C>T
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 3/21 chrX 21438110
chrX:21438111 A
A
 G
G
 1 a0001c0001t0035g0054
a0001c0001t0035g0054
 1 NA18967.hp1
NA18967.hp1
 intron_variant MODIFIER c.432-2583A>G
c.432-2583A>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 3/21 chrX 21438111
chrX:21438112 A
A
 T
T
 1 a0001c0001t0035g0054
a0001c0001t0035g0054
 1 NA18967.hp1
NA18967.hp1
 intron_variant MODIFIER c.432-2582A>T
c.432-2582A>T
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 3/21 chrX 21438112
chrX:21438338 A
A
 G
G
 1 a0001c0001t0003g0151
a0001c0001t0003g0151
 1 HG01081.hp2
HG01081.hp2
 intron_variant MODIFIER c.432-2356A>G
c.432-2356A>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 3/21 chrX 21438338
chrX:21438426 G
G
 C
C
 1 a0001c0001t0007g0022
a0001c0001t0007g0022
 1 HG02132.hp1
HG02132.hp1
 intron_variant MODIFIER c.432-2268G>C
c.432-2268G>C
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 3/21 chrX 21438426
chrX:21438580 T
T
 G
G
 1 a0001c0001t0002g0043
a0001c0001t0002g0043
 1 HG02809.hp2
HG02809.hp2
 intron_variant MODIFIER c.432-2114T>G
c.432-2114T>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 3/21 chrX 21438580
chrX:21438806 CAT
CAT
 C
C
 1 a0001c0003t0014g0147
a0001c0003t0014g0147
 1 HG02615.hp1
HG02615.hp1
 intron_variant MODIFIER c.432-1885_432-1884d
others(4): Show 
c.432-1885_432-1884delAT
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 3/21 INFO_REALIGN_3_PRIME chrX 21438806
chrX:21438860 G
G
 A
A
 3 a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
 3 HG02615.hp1
HG02965.hp1
HG03471.hp1
HG02615.hp1
HG02965.hp1
HG03471.hp1
 intron_variant MODIFIER c.432-1834G>A
c.432-1834G>A
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 3/21 chrX 21438860
chrX:21438862 G
G
 T
T
 3 a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
 3 HG02615.hp1
HG02965.hp1
HG03471.hp1
HG02615.hp1
HG02965.hp1
HG03471.hp1
 intron_variant MODIFIER c.432-1832G>T
c.432-1832G>T
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 3/21 chrX 21438862
chrX:21438919 A
A
 G
G
 1 a0001c0001t0012g0142
a0001c0001t0012g0142
 1 HG03139.hp1
HG03139.hp1
 intron_variant MODIFIER c.432-1775A>G
c.432-1775A>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 3/21 chrX 21438919
chrX:21439416 C
C
 G
G
 3 a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
 3 HG02615.hp1
HG02965.hp1
HG03471.hp1
HG02615.hp1
HG02965.hp1
HG03471.hp1
 intron_variant MODIFIER c.432-1278C>G
c.432-1278C>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 3/21 chrX 21439416
chrX:21439544 C
C
 T
T
 1 a0001c0001t0002g0121
a0001c0001t0002g0121
 1 NA18612.hp1
NA18612.hp1
 intron_variant MODIFIER c.432-1150C>T
c.432-1150C>T
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 3/21 chrX 21439544
chrX:21439554 A
A
 C
C
 1 a0001c0001t0007g0140
a0001c0001t0007g0140
 1 HG02922.hp1
HG02922.hp1
 intron_variant MODIFIER c.432-1140A>C
c.432-1140A>C
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 3/21 chrX 21439554
chrX:21439616 A
A
 G
G
 1 a0001c0001t0001g0077
a0001c0001t0001g0077
 1 HG00735.hp2
HG00735.hp2
 intron_variant MODIFIER c.432-1078A>G
c.432-1078A>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 3/21 chrX 21439616
chrX:21439633 A
A
 G
G
 3 a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
 3 HG02615.hp1
HG02965.hp1
HG03471.hp1
HG02615.hp1
HG02965.hp1
HG03471.hp1
 intron_variant MODIFIER c.432-1061A>G
c.432-1061A>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 3/21 chrX 21439633
chrX:21439702 C
C
 T
T
 1 a0001c0001t0012g0142
a0001c0001t0012g0142
 1 HG03139.hp1
HG03139.hp1
 intron_variant MODIFIER c.432-992C>T
c.432-992C>T
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 3/21 chrX 21439702
chrX:21439748 A
A
 G
G
 1 a0001c0001t0003g0061
a0001c0001t0003g0061
 1 NA18970.hp1
NA18970.hp1
 intron_variant MODIFIER c.432-946A>G
c.432-946A>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 3/21 chrX 21439748
chrX:21439952 A
A
 C
C
 1 a0001c0001t0008g0124
a0001c0001t0008g0124
 1 NA19012.hp1
NA19012.hp1
 intron_variant MODIFIER c.432-742A>C
c.432-742A>C
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 3/21 chrX 21439952
chrX:21440277 A
A
 G
G
 17 a0001c0001t0003g0015
a0001c0001t0003g0024
a0001c0001t0009g0010
others(14): Show 
a0001c0001t0003g0015
a0001c0001t0003g0024
a0001c0001t0009g0010
a0001c0001t0009g0011
a0001c0001t0009g0012
a0001c0001t0009g0013
a0001c0001t0011g0016
a0001c0001t0011g0017
a0001c0001t0011g0138
a0001c0001t0017g0018
a0001c0001t0019g0014
a0001c0001t0041g0009
a0001c0001t0042g0008
a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
a0001c0007t0036g0026
 17 HG01071.hp2
HG01081.hp1
HG01884.hp2
others(14): Show 
HG01071.hp2
HG01081.hp1
HG01884.hp2
HG02280.hp1
HG02280.hp2
HG02572.hp1
HG02615.hp1
HG02647.hp1
HG02717.hp1
HG02809.hp1
HG02965.hp1
HG03041.hp1
HG03098.hp1
HG03471.hp1
HG03486.hp1
HG03579.hp1
NA18522.hp1
 intron_variant MODIFIER c.432-417A>G
c.432-417A>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 3/21 chrX 21440277
chrX:21440371 G
G
 A
A
 3 a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
 3 HG02615.hp1
HG02965.hp1
HG03471.hp1
HG02615.hp1
HG02965.hp1
HG03471.hp1
 intron_variant MODIFIER c.432-323G>A
c.432-323G>A
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 3/21 chrX 21440371
chrX:21440575 G
G
 C
C
 1 a0001c0001t0016g0032
a0001c0001t0016g0032
 1 HG02602.hp1
HG02602.hp1
 intron_variant MODIFIER c.432-119G>C
c.432-119G>C
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 3/21 chrX 21440575
chrX:21440846 T
T
 A
A
 1 a0001c0001t0025g0130
a0001c0001t0025g0130
 1 NA19062.hp1
NA19062.hp1
 intron_variant MODIFIER c.519+65T>A
c.519+65T>A
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 4/21 chrX 21440846
chrX:21441035 G
G
 T
T
 1 a0001c0002t0001g0105
a0001c0002t0001g0105
 1 HG01943.hp1
HG01943.hp1
 intron_variant MODIFIER c.519+254G>T
c.519+254G>T
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 4/21 chrX 21441035
chrX:21441037 T
T
 G
G
 1 a0001c0001t0011g0017
a0001c0001t0011g0017
 1 HG03579.hp1
HG03579.hp1
 intron_variant MODIFIER c.519+256T>G
c.519+256T>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 4/21 chrX 21441037
chrX:21441172 A
A
 G
G
 1 a0001c0001t0003g0029
a0001c0001t0003g0029
 1 HG02895.hp1
HG02895.hp1
 intron_variant MODIFIER c.519+391A>G
c.519+391A>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 4/21 chrX 21441172
chrX:21441568 C
C
 T
T
 22 a0001c0001t0001g0001
a0001c0001t0002g0003
a0001c0001t0002g0046
others(19): Show 
a0001c0001t0001g0001
a0001c0001t0002g0003
a0001c0001t0002g0046
a0001c0001t0002g0047
a0001c0001t0002g0049
a0001c0001t0002g0050
a0001c0001t0002g0110
a0001c0001t0002g0111
a0001c0001t0002g0112
a0001c0001t0002g0113
a0001c0001t0002g0114
a0001c0001t0002g0118
a0001c0001t0002g0119
a0001c0001t0002g0120
a0001c0001t0002g0121
a0001c0001t0002g0122
a0001c0001t0002g0125
a0001c0001t0002g0126
a0001c0001t0008g0135
a0001c0001t0008g0143
a0001c0001t0012g0142
a0001c0001t0039g0144
 22 HG00140.hp1
HG00621.hp1
HG00735.hp1
others(19): Show 
HG00140.hp1
HG00621.hp1
HG00735.hp1
HG00741.hp2
HG01433.hp1
HG02074.hp1
HG02083.hp1
HG03139.hp1
NA18612.hp1
NA18943.hp1
NA18944.hp1
NA18966.hp1
NA18986.hp1
NA18990.hp1
NA19000.hp1
NA19004.hp1
NA19055.hp1
NA19068.hp1
NA19070.hp1
NA19076.hp1
NA19086.hp1
NA19091.hp1
 intron_variant MODIFIER c.519+787C>T
c.519+787C>T
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 4/21 chrX 21441568
chrX:21441765 A
A
 G
G
 1 a0001c0001t0003g0031
a0001c0001t0003g0031
 1 HG02976.hp2
HG02976.hp2
 intron_variant MODIFIER c.519+984A>G
c.519+984A>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 4/21 chrX 21441765
chrX:21441928 A
A
 T
T
 1 a0001c0001t0003g0101
a0001c0001t0003g0101
 1 NA18995.hp1
NA18995.hp1
 intron_variant MODIFIER c.519+1147A>T
c.519+1147A>T
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 4/21 chrX 21441928
chrX:21442223 C
C
 T
T
 4 a0001c0001t0003g0015
a0001c0001t0011g0016
a0001c0001t0011g0017
others(1): Show 
a0001c0001t0003g0015
a0001c0001t0011g0016
a0001c0001t0011g0017
a0001c0001t0011g0138
 4 HG02717.hp1
HG03041.hp1
HG03579.hp1
others(1): Show 
HG02717.hp1
HG03041.hp1
HG03579.hp1
NA18522.hp1
 intron_variant MODIFIER c.519+1442C>T
c.519+1442C>T
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 4/21 chrX 21442223
chrX:21442256 TGA
TGA
 T
T
 1 a0001c0001t0001g0131
a0001c0001t0001g0131
 1 NA18959.hp1
NA18959.hp1
 intron_variant MODIFIER c.519+1476_519+1477d
others(4): Show 
c.519+1476_519+1477delGA
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 4/21 chrX 21442256
chrX:21442257 G
G
 GA
GA
 1 a0001c0001t0006g0161
a0001c0001t0006g0161
 1 HG02976.hp1
HG02976.hp1
 intron_variant MODIFIER c.519+1487dupA
c.519+1487dupA
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 4/21 INFO_REALIGN_3_PRIME chrX 21442257
chrX:21442257 GA
GA
 G
G
 2 a0001c0001t0006g0160
a0001c0001t0007g0127
a0001c0001t0006g0160
a0001c0001t0007g0127
 2 HG02615.hp2
NA19072.hp1
HG02615.hp2
NA19072.hp1
 intron_variant MODIFIER c.519+1487delA
c.519+1487delA
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 4/21 INFO_REALIGN_3_PRIME chrX 21442257
chrX:21442425 C
C
 T
T
 3 a0001c0001t0001g0062
a0001c0001t0001g0075
a0001c0001t0001g0076
a0001c0001t0001g0062
a0001c0001t0001g0075
a0001c0001t0001g0076
 3 NA18948.hp1
NA18982.hp1
NA18988.hp1
NA18948.hp1
NA18982.hp1
NA18988.hp1
 intron_variant MODIFIER c.519+1644C>T
c.519+1644C>T
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 4/21 chrX 21442425
chrX:21442501 C
C
 T
T
 3 a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
 3 HG02615.hp1
HG02965.hp1
HG03471.hp1
HG02615.hp1
HG02965.hp1
HG03471.hp1
 intron_variant MODIFIER c.519+1720C>T
c.519+1720C>T
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 4/21 chrX 21442501
chrX:21442643 G
G
 T
T
 1 a0001c0001t0043g0007
a0001c0001t0043g0007
 1 HG03491.hp2
HG03491.hp2
 intron_variant MODIFIER c.519+1862G>T
c.519+1862G>T
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 4/21 chrX 21442643
chrX:21442684 T
T
 G
G
 7 a0001c0001t0001g0039
a0001c0001t0001g0078
a0001c0001t0001g0081
others(4): Show 
a0001c0001t0001g0039
a0001c0001t0001g0078
a0001c0001t0001g0081
a0001c0001t0001g0082
a0001c0001t0001g0083
a0001c0001t0001g0084
a0001c0001t0007g0127
 7 HG00642.hp1
HG01261.hp1
HG01928.hp1
others(4): Show 
HG00642.hp1
HG01261.hp1
HG01928.hp1
NA19009.hp1
NA19072.hp1
NA19089.hp1
NA20300.hp1
 intron_variant MODIFIER c.519+1903T>G
c.519+1903T>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 4/21 chrX 21442684
chrX:21442895 A
A
 G
G
 1 a0001c0001t0042g0008
a0001c0001t0042g0008
 1 HG02647.hp1
HG02647.hp1
 intron_variant MODIFIER c.519+2114A>G
c.519+2114A>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 4/21 chrX 21442895
chrX:21443583 C
C
 T
T
 1 a0001c0001t0007g0140
a0001c0001t0007g0140
 1 HG02922.hp1
HG02922.hp1
 intron_variant MODIFIER c.519+2802C>T
c.519+2802C>T
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 4/21 chrX 21443583
chrX:21443765 C
C
 A
A
 1 a0001c0001t0043g0007
a0001c0001t0043g0007
 1 HG03491.hp2
HG03491.hp2
 intron_variant MODIFIER c.519+2984C>A
c.519+2984C>A
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 4/21 chrX 21443765
chrX:21444301 T
T
 C
C
 1 a0001c0001t0042g0008
a0001c0001t0042g0008
 1 HG02647.hp1
HG02647.hp1
 intron_variant MODIFIER c.519+3520T>C
c.519+3520T>C
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 4/21 chrX 21444301
chrX:21444759 A
A
 T
T
 2 a0001c0001t0001g0102
a0001c0001t0001g0103
a0001c0001t0001g0102
a0001c0001t0001g0103
 2 HG03491.hp1
HG03492.hp1
HG03491.hp1
HG03492.hp1
 intron_variant MODIFIER c.519+3978A>T
c.519+3978A>T
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 4/21 chrX 21444759
chrX:21444762 TA
TA
 T
T
 5 a0001c0001t0002g0004
a0001c0001t0008g0005
a0001c0001t0012g0045
others(2): Show 
a0001c0001t0002g0004
a0001c0001t0008g0005
a0001c0001t0012g0045
a0001c0001t0023g0006
a0002c0005t0003g0030
 5 HG01069.hp1
HG01071.hp1
HG02145.hp1
others(2): Show 
HG01069.hp1
HG01071.hp1
HG02145.hp1
HG02886.hp2
HG03654.hp1
 intron_variant MODIFIER c.519+3995delA
c.519+3995delA
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 4/21 INFO_REALIGN_3_PRIME chrX 21444762
chrX:21445038 A
A
 G
G
 1 a0001c0001t0023g0006
a0001c0001t0023g0006
 1 HG03654.hp1
HG03654.hp1
 intron_variant MODIFIER c.519+4257A>G
c.519+4257A>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 4/21 chrX 21445038
chrX:21445148 G
G
 A
A
 3 a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
 3 HG02615.hp1
HG02965.hp1
HG03471.hp1
HG02615.hp1
HG02965.hp1
HG03471.hp1
 intron_variant MODIFIER c.519+4367G>A
c.519+4367G>A
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 4/21 chrX 21445148
chrX:21445413 C
C
 T
T
 4 a0001c0001t0003g0015
a0001c0001t0011g0016
a0001c0001t0011g0017
others(1): Show 
a0001c0001t0003g0015
a0001c0001t0011g0016
a0001c0001t0011g0017
a0001c0001t0011g0138
 4 HG02717.hp1
HG03041.hp1
HG03579.hp1
others(1): Show 
HG02717.hp1
HG03041.hp1
HG03579.hp1
NA18522.hp1
 intron_variant MODIFIER c.519+4632C>T
c.519+4632C>T
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 4/21 chrX 21445413
chrX:21445527 T
T
 C
C
 1 a0001c0001t0001g0076
a0001c0001t0001g0076
 1 NA18982.hp1
NA18982.hp1
 intron_variant MODIFIER c.519+4746T>C
c.519+4746T>C
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 4/21 chrX 21445527
chrX:21445635 A
A
 G
G
 13 a0001c0001t0003g0015
a0001c0001t0009g0010
a0001c0001t0009g0011
others(10): Show 
a0001c0001t0003g0015
a0001c0001t0009g0010
a0001c0001t0009g0011
a0001c0001t0009g0012
a0001c0001t0009g0013
a0001c0001t0011g0016
a0001c0001t0011g0017
a0001c0001t0011g0138
a0001c0001t0017g0018
a0001c0001t0019g0014
a0001c0001t0020g0141
a0001c0001t0041g0009
a0001c0001t0042g0008
 13 HG01071.hp2
HG01243.hp1
HG01884.hp2
others(10): Show 
HG01071.hp2
HG01243.hp1
HG01884.hp2
HG02280.hp2
HG02572.hp1
HG02647.hp1
HG02717.hp1
HG02809.hp1
HG03041.hp1
HG03098.hp1
HG03486.hp1
HG03579.hp1
NA18522.hp1
 intron_variant MODIFIER c.519+4854A>G
c.519+4854A>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 4/21 chrX 21445635
chrX:21445676 G
G
 A
A
 2 a0001c0001t0002g0004
a0001c0001t0008g0005
a0001c0001t0002g0004
a0001c0001t0008g0005
 2 HG01069.hp1
HG01071.hp1
HG01069.hp1
HG01071.hp1
 intron_variant MODIFIER c.519+4895G>A
c.519+4895G>A
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 4/21 chrX 21445676
chrX:21445772 T
T
 C
C
 1 a0001c0001t0002g0019
a0001c0001t0002g0019
 1 HG01106.hp1
HG01106.hp1
 intron_variant MODIFIER c.519+4991T>C
c.519+4991T>C
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 4/21 chrX 21445772
chrX:21446240 A
A
 G
G
 3 a0001c0001t0010g0152
a0001c0001t0010g0153
a0001c0001t0010g0162
a0001c0001t0010g0152
a0001c0001t0010g0153
a0001c0001t0010g0162
 3 HG03209.hp1
HG03225.hp1
NA19240.hp2
HG03209.hp1
HG03225.hp1
NA19240.hp2
 intron_variant MODIFIER c.519+5459A>G
c.519+5459A>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 4/21 chrX 21446240
chrX:21446305 CA
CA
 C
C
 1 a0001c0001t0001g0060
a0001c0001t0001g0060
 1 HG03041.hp2
HG03041.hp2
 intron_variant MODIFIER c.519+5528delA
c.519+5528delA
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 4/21 INFO_REALIGN_3_PRIME chrX 21446305
chrX:21446423 A
A
 G
G
 1 a0001c0001t0024g0156
a0001c0001t0024g0156
 1 NA20300.hp2
NA20300.hp2
 intron_variant MODIFIER c.519+5642A>G
c.519+5642A>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 4/21 chrX 21446423
chrX:21446610 T
T
 A
A
 2 a0001c0001t0002g0004
a0001c0001t0008g0005
a0001c0001t0002g0004
a0001c0001t0008g0005
 2 HG01069.hp1
HG01071.hp1
HG01069.hp1
HG01071.hp1
 intron_variant MODIFIER c.519+5829T>A
c.519+5829T>A
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 4/21 chrX 21446610
chrX:21446619 A
A
 T
T
 4 a0001c0001t0003g0015
a0001c0001t0011g0016
a0001c0001t0011g0017
others(1): Show 
a0001c0001t0003g0015
a0001c0001t0011g0016
a0001c0001t0011g0017
a0001c0001t0011g0138
 4 HG02717.hp1
HG03041.hp1
HG03579.hp1
others(1): Show 
HG02717.hp1
HG03041.hp1
HG03579.hp1
NA18522.hp1
 intron_variant MODIFIER c.519+5838A>T
c.519+5838A>T
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 4/21 chrX 21446619
chrX:21446690 G
G
 A
A
 3 a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
 3 HG02615.hp1
HG02965.hp1
HG03471.hp1
HG02615.hp1
HG02965.hp1
HG03471.hp1
 intron_variant MODIFIER c.519+5909G>A
c.519+5909G>A
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 4/21 chrX 21446690
chrX:21446901 T
T
 C
C
 1 a0001c0001t0008g0135
a0001c0001t0008g0135
 1 NA19000.hp1
NA19000.hp1
 intron_variant MODIFIER c.519+6120T>C
c.519+6120T>C
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 4/21 chrX 21446901
chrX:21447201 G
G
 T
T
 3 a0001c0001t0001g0068
a0001c0001t0031g0065
a0001c0001t0033g0002
a0001c0001t0001g0068
a0001c0001t0031g0065
a0001c0001t0033g0002
 3 HG02040.hp1
NA18989.hp1
NA19006.hp1
HG02040.hp1
NA18989.hp1
NA19006.hp1
 intron_variant MODIFIER c.519+6420G>T
c.519+6420G>T
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 4/21 chrX 21447201
chrX:21448395 C
C
 G
G
 3 a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
 3 HG02615.hp1
HG02965.hp1
HG03471.hp1
HG02615.hp1
HG02965.hp1
HG03471.hp1
 intron_variant MODIFIER c.519+7614C>G
c.519+7614C>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 4/21 chrX 21448395
chrX:21448857 A
A
 T
T
 1 a0001c0001t0031g0065
a0001c0001t0031g0065
 1 HG02040.hp1
HG02040.hp1
 intron_variant MODIFIER c.519+8076A>T
c.519+8076A>T
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 4/21 chrX 21448857
chrX:21449158 G
G
 C
C
 3 a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
 3 HG02615.hp1
HG02965.hp1
HG03471.hp1
HG02615.hp1
HG02965.hp1
HG03471.hp1
 intron_variant MODIFIER c.519+8377G>C
c.519+8377G>C
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 4/21 chrX 21449158
chrX:21449303 C
C
 CA
CA
 7 a0001c0001t0001g0037
a0001c0001t0001g0062
a0001c0001t0001g0082
others(4): Show 
a0001c0001t0001g0037
a0001c0001t0001g0062
a0001c0001t0001g0082
a0001c0001t0001g0134
a0001c0001t0010g0152
a0001c0001t0010g0153
a0001c0002t0001g0042
 7 HG01928.hp1
HG01934.hp1
HG02071.hp1
others(4): Show 
HG01928.hp1
HG01934.hp1
HG02071.hp1
HG02135.hp1
HG03225.hp1
NA18988.hp1
NA19240.hp2
 intron_variant MODIFIER c.519+8541dupA
c.519+8541dupA
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 4/21 INFO_REALIGN_3_PRIME chrX 21449303
chrX:21449303 CA
CA
 C
C
 57 a0001c0001t0001g0036
a0001c0001t0001g0060
a0001c0001t0002g0003
others(54): Show 
a0001c0001t0001g0036
a0001c0001t0001g0060
a0001c0001t0002g0003
a0001c0001t0002g0004
a0001c0001t0002g0019
a0001c0001t0002g0028
a0001c0001t0002g0046
a0001c0001t0002g0047
a0001c0001t0002g0049
a0001c0001t0002g0050
a0001c0001t0002g0110
a0001c0001t0002g0112
a0001c0001t0002g0114
a0001c0001t0002g0119
a0001c0001t0002g0120
a0001c0001t0002g0121
a0001c0001t0002g0122
a0001c0001t0002g0125
a0001c0001t0002g0126
a0001c0001t0003g0015
a0001c0001t0003g0024
a0001c0001t0003g0029
a0001c0001t0003g0031
a0001c0001t0006g0155
a0001c0001t0006g0157
a0001c0001t0006g0159
a0001c0001t0006g0160
a0001c0001t0006g0161
a0001c0001t0007g0140
a0001c0001t0008g0005
a0001c0001t0008g0135
a0001c0001t0008g0143
a0001c0001t0009g0010
a0001c0001t0009g0011
a0001c0001t0009g0012
a0001c0001t0009g0013
a0001c0001t0011g0016
a0001c0001t0011g0138
a0001c0001t0012g0025
a0001c0001t0012g0045
a0001c0001t0012g0142
a0001c0001t0017g0018
a0001c0001t0017g0146
a0001c0001t0020g0141
a0001c0001t0022g0033
a0001c0001t0024g0156
a0001c0001t0027g0034
a0001c0001t0038g0150
a0001c0001t0039g0144
a0001c0001t0040g0027
a0001c0001t0042g0008
a0001c0001t0043g0007
a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
a0002c0005t0003g0030
a0003c0004t0006g0154
 57 HG00140.hp1
HG00621.hp1
HG01069.hp1
others(54): Show 
HG00140.hp1
HG00621.hp1
HG01069.hp1
HG01071.hp1
HG01071.hp2
HG01106.hp1
HG01109.hp1
HG01243.hp1
HG01433.hp1
HG01884.hp1
HG02055.hp1
HG02074.hp1
HG02083.hp1
HG02145.hp1
HG02258.hp1
HG02280.hp1
HG02280.hp2
HG02486.hp1
HG02572.hp1
HG02615.hp1
HG02615.hp2
HG02647.hp1
HG02717.hp1
HG02809.hp1
HG02886.hp1
HG02886.hp2
HG02895.hp1
HG02922.hp1
HG02922.hp2
HG02965.hp1
HG02976.hp1
HG02976.hp2
HG03041.hp1
HG03041.hp2
HG03130.hp1
HG03139.hp1
HG03471.hp1
HG03486.hp1
HG03486.hp2
HG03491.hp2
HG04115.hp1
NA18522.hp1
NA18612.hp1
NA18943.hp1
NA18944.hp1
NA18966.hp1
NA18986.hp1
NA18990.hp1
NA19000.hp1
NA19004.hp1
NA19043.hp1
NA19055.hp1
NA19070.hp1
NA19076.hp1
NA19091.hp1
NA19240.hp1
NA20300.hp2
 intron_variant MODIFIER c.519+8541delA
c.519+8541delA
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 4/21 INFO_REALIGN_3_PRIME chrX 21449303
chrX:21449303 CAA
CAA
 C
C
 3 a0001c0001t0003g0151
a0001c0001t0011g0017
a0001c0007t0036g0026
a0001c0001t0003g0151
a0001c0001t0011g0017
a0001c0007t0036g0026
 3 HG01081.hp1
HG01081.hp2
HG03579.hp1
HG01081.hp1
HG01081.hp2
HG03579.hp1
 intron_variant MODIFIER c.519+8540_519+8541d
others(4): Show 
c.519+8540_519+8541delAA
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 4/21 INFO_REALIGN_3_PRIME chrX 21449303
chrX:21449841 C
C
 T
T
 3 a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
 3 HG02615.hp1
HG02965.hp1
HG03471.hp1
HG02615.hp1
HG02965.hp1
HG03471.hp1
 intron_variant MODIFIER c.519+9060C>T
c.519+9060C>T
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 4/21 chrX 21449841
chrX:21450033 C
C
 T
T
 1 a0001c0001t0042g0008
a0001c0001t0042g0008
 1 HG02647.hp1
HG02647.hp1
 intron_variant MODIFIER c.519+9252C>T
c.519+9252C>T
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 4/21 chrX 21450033
chrX:21450065 C
C
 CTG
CTG
 8 a0001c0001t0003g0015
a0001c0001t0003g0024
a0001c0001t0003g0029
others(5): Show 
a0001c0001t0003g0015
a0001c0001t0003g0024
a0001c0001t0003g0029
a0001c0001t0011g0016
a0001c0001t0011g0017
a0001c0001t0011g0138
a0001c0001t0015g0038
a0001c0007t0036g0026
 8 HG01081.hp1
HG02280.hp1
HG02717.hp1
others(5): Show 
HG01081.hp1
HG02280.hp1
HG02717.hp1
HG02895.hp1
HG03041.hp1
HG03579.hp1
HG03688.hp1
NA18522.hp1
 intron_variant MODIFIER c.519+9303_519+9304d
others(4): Show 
c.519+9303_519+9304dupTG
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 4/21 INFO_REALIGN_3_PRIME chrX 21450065
chrX:21450065 CTG
CTG
 C
C
 3 a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
 3 HG02615.hp1
HG02965.hp1
HG03471.hp1
HG02615.hp1
HG02965.hp1
HG03471.hp1
 intron_variant MODIFIER c.519+9303_519+9304d
others(4): Show 
c.519+9303_519+9304delTG
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 4/21 INFO_REALIGN_3_PRIME chrX 21450065
chrX:21450180 G
G
 A
A
 1 a0001c0001t0001g0048
a0001c0001t0001g0048
 1 HG00673.hp1
HG00673.hp1
 intron_variant MODIFIER c.519+9399G>A
c.519+9399G>A
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 4/21 chrX 21450180
chrX:21450717 G
G
 A
A
 1 a0001c0001t0027g0034
a0001c0001t0027g0034
 1 HG02486.hp1
HG02486.hp1
 intron_variant MODIFIER c.519+9936G>A
c.519+9936G>A
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 4/21 chrX 21450717
chrX:21450726 C
C
 T
T
 1 a0001c0001t0001g0093
a0001c0001t0001g0093
 1 NA20805.hp1
NA20805.hp1
 intron_variant MODIFIER c.519+9945C>T
c.519+9945C>T
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 4/21 chrX 21450726
chrX:21451381 A
A
 G
G
 2 a0001c0001t0006g0155
a0003c0004t0006g0154
a0001c0001t0006g0155
a0003c0004t0006g0154
 2 HG01884.hp1
HG02922.hp2
HG01884.hp1
HG02922.hp2
 intron_variant MODIFIER c.519+10600A>G
c.519+10600A>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 4/21 chrX 21451381
chrX:21451703 T
T
 TG
TG
 1 a0001c0001t0001g0080
a0001c0001t0001g0080
 1 HG01255.hp1
HG01255.hp1
 intron_variant MODIFIER c.519+10928dupG
c.519+10928dupG
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 4/21 INFO_REALIGN_3_PRIME chrX 21451703
chrX:21451710 A
A
 AG
AG
 1 a0001c0001t0002g0110
a0001c0001t0002g0110
 1 HG02074.hp1
HG02074.hp1
 intron_variant MODIFIER c.519+10935dupG
c.519+10935dupG
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 4/21 INFO_REALIGN_3_PRIME chrX 21451710
chrX:21451754 C
C
 T
T
 1 a0001c0001t0001g0097
a0001c0001t0001g0097
 1 HG04228.hp1
HG04228.hp1
 intron_variant MODIFIER c.519+10973C>T
c.519+10973C>T
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 4/21 chrX 21451754
chrX:21451795 G
G
 A
A
 1 a0001c0001t0001g0052
a0001c0001t0001g0052
 1 NA19007.hp1
NA19007.hp1
 intron_variant MODIFIER c.519+11014G>A
c.519+11014G>A
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 4/21 chrX 21451795
chrX:21451874 G
G
 A
A
 3 a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
 3 HG02615.hp1
HG02965.hp1
HG03471.hp1
HG02615.hp1
HG02965.hp1
HG03471.hp1
 intron_variant MODIFIER c.519+11093G>A
c.519+11093G>A
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 4/21 chrX 21451874
chrX:21451917 C
C
 A
A
 1 a0001c0001t0002g0046
a0001c0001t0002g0046
 1 HG02083.hp1
HG02083.hp1
 intron_variant MODIFIER c.519+11136C>A
c.519+11136C>A
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 4/21 chrX 21451917
chrX:21452157 C
C
 A
A
 1 a0001c0001t0003g0061
a0001c0001t0003g0061
 1 NA18970.hp1
NA18970.hp1
 intron_variant MODIFIER c.519+11376C>A
c.519+11376C>A
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 4/21 chrX 21452157
chrX:21452264 G
G
 T
T
 33 a0001c0001t0001g0158
a0001c0001t0003g0015
a0001c0001t0003g0151
others(30): Show 
a0001c0001t0001g0158
a0001c0001t0003g0015
a0001c0001t0003g0151
a0001c0001t0006g0155
a0001c0001t0006g0157
a0001c0001t0006g0159
a0001c0001t0006g0160
a0001c0001t0006g0161
a0001c0001t0007g0140
a0001c0001t0009g0010
a0001c0001t0009g0011
a0001c0001t0009g0012
a0001c0001t0009g0013
a0001c0001t0010g0152
a0001c0001t0010g0153
a0001c0001t0010g0162
a0001c0001t0011g0016
a0001c0001t0011g0017
a0001c0001t0011g0138
a0001c0001t0017g0018
a0001c0001t0017g0146
a0001c0001t0019g0014
a0001c0001t0020g0141
a0001c0001t0022g0033
a0001c0001t0024g0156
a0001c0001t0027g0034
a0001c0001t0041g0009
a0001c0001t0042g0008
a0001c0001t0043g0007
a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
a0003c0004t0006g0154
 33 HG01071.hp2
HG01081.hp2
HG01109.hp1
others(30): Show 
HG01071.hp2
HG01081.hp2
HG01109.hp1
HG01243.hp1
HG01884.hp1
HG01884.hp2
HG02055.hp1
HG02280.hp2
HG02486.hp1
HG02572.hp1
HG02615.hp1
HG02615.hp2
HG02647.hp1
HG02717.hp1
HG02809.hp1
HG02886.hp1
HG02922.hp1
HG02922.hp2
HG02965.hp1
HG02976.hp1
HG03041.hp1
HG03098.hp1
HG03130.hp1
HG03209.hp1
HG03225.hp1
HG03471.hp1
HG03486.hp1
HG03491.hp2
HG03516.hp1
HG03579.hp1
NA18522.hp1
NA19240.hp2
NA20300.hp2
 intron_variant MODIFIER c.519+11483G>T
c.519+11483G>T
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 4/21 chrX 21452264
chrX:21452282 C
C
 T
T
 1 a0001c0001t0004g0129
a0001c0001t0004g0129
 1 HG00609.hp1
HG00609.hp1
 intron_variant MODIFIER c.519+11501C>T
c.519+11501C>T
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 4/21 chrX 21452282
chrX:21452283 G
G
 A
A
 1 a0001c0001t0030g0086
a0001c0001t0030g0086
 1 HG04199.hp1
HG04199.hp1
 intron_variant MODIFIER c.519+11502G>A
c.519+11502G>A
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 4/21 chrX 21452283
chrX:21452290 C
C
 T
T
 1 a0001c0001t0043g0007
a0001c0001t0043g0007
 1 HG03491.hp2
HG03491.hp2
 intron_variant MODIFIER c.519+11509C>T
c.519+11509C>T
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 4/21 chrX 21452290
chrX:21452300 A
A
 T
T
 1 a0001c0001t0002g0111
a0001c0001t0002g0111
 1 HG00741.hp2
HG00741.hp2
 intron_variant MODIFIER c.519+11519A>T
c.519+11519A>T
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 4/21 chrX 21452300
chrX:21452306 T
T
 C
C
 16 a0001c0001t0003g0015
a0001c0001t0009g0010
a0001c0001t0009g0011
others(13): Show 
a0001c0001t0003g0015
a0001c0001t0009g0010
a0001c0001t0009g0011
a0001c0001t0009g0012
a0001c0001t0009g0013
a0001c0001t0011g0016
a0001c0001t0011g0017
a0001c0001t0011g0138
a0001c0001t0017g0018
a0001c0001t0019g0014
a0001c0001t0020g0141
a0001c0001t0041g0009
a0001c0001t0042g0008
a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
 16 HG01071.hp2
HG01243.hp1
HG01884.hp2
others(13): Show 
HG01071.hp2
HG01243.hp1
HG01884.hp2
HG02280.hp2
HG02572.hp1
HG02615.hp1
HG02647.hp1
HG02717.hp1
HG02809.hp1
HG02965.hp1
HG03041.hp1
HG03098.hp1
HG03471.hp1
HG03486.hp1
HG03579.hp1
NA18522.hp1
 intron_variant MODIFIER c.519+11525T>C
c.519+11525T>C
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 4/21 chrX 21452306
chrX:21452363 AT
AT
 A
A
 1 a0001c0001t0003g0029
a0001c0001t0003g0029
 1 HG02895.hp1
HG02895.hp1
 intron_variant MODIFIER c.519+11584delT
c.519+11584delT
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 4/21 INFO_REALIGN_3_PRIME chrX 21452363
chrX:21452372 A
A
 G
G
 1 a0001c0001t0031g0065
a0001c0001t0031g0065
 1 HG02040.hp1
HG02040.hp1
 intron_variant MODIFIER c.519+11591A>G
c.519+11591A>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 4/21 chrX 21452372
chrX:21452578 C
C
 T
T
 1 a0001c0001t0003g0031
a0001c0001t0003g0031
 1 HG02976.hp2
HG02976.hp2
 intron_variant MODIFIER c.519+11797C>T
c.519+11797C>T
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 4/21 chrX 21452578
chrX:21452702 G
G
 A
A
 3 a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
 3 HG02615.hp1
HG02965.hp1
HG03471.hp1
HG02615.hp1
HG02965.hp1
HG03471.hp1
 intron_variant MODIFIER c.519+11921G>A
c.519+11921G>A
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 4/21 chrX 21452702
chrX:21452753 C
C
 CTTATT
CTTATT
 22 a0001c0001t0001g0071
a0001c0001t0001g0074
a0001c0001t0001g0158
others(19): Show 
a0001c0001t0001g0071
a0001c0001t0001g0074
a0001c0001t0001g0158
a0001c0001t0002g0028
a0001c0001t0002g0112
a0001c0001t0002g0113
a0001c0001t0003g0031
a0001c0001t0003g0116
a0001c0001t0005g0063
a0001c0001t0005g0072
a0001c0001t0006g0155
a0001c0001t0006g0157
a0001c0001t0006g0160
a0001c0001t0006g0161
a0001c0001t0010g0152
a0001c0001t0010g0153
a0001c0001t0011g0017
a0001c0001t0012g0025
a0001c0001t0021g0088
a0001c0001t0032g0163
a0001c0001t0038g0150
a0003c0004t0006g0154
 22 HG00735.hp1
HG01433.hp1
HG01884.hp1
others(19): Show 
HG00735.hp1
HG01433.hp1
HG01884.hp1
HG02258.hp1
HG02615.hp2
HG02922.hp2
HG02976.hp1
HG02976.hp2
HG03017.hp1
HG03130.hp1
HG03225.hp1
HG03486.hp2
HG03516.hp1
HG03579.hp1
NA18945.hp1
NA18962.hp1
NA18983.hp1
NA19058.hp1
NA19060.hp1
NA19063.hp1
NA19240.hp1
NA19240.hp2
 intron_variant MODIFIER c.519+12035_519+1203
others(9): Show 
c.519+12035_519+12039dupATTTT
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 4/21 INFO_REALIGN_3_PRIME chrX 21452753
chrX:21452753 C
C
 CTTATTTT
others(3): Show 
CTTATTTTATT
 6 a0001c0001t0001g0036
a0001c0001t0002g0019
a0001c0001t0002g0111
others(3): Show 
a0001c0001t0001g0036
a0001c0001t0002g0019
a0001c0001t0002g0111
a0001c0001t0002g0114
a0001c0001t0010g0162
a0001c0001t0023g0006
 6 HG00140.hp1
HG00741.hp2
HG01106.hp1
others(3): Show 
HG00140.hp1
HG00741.hp2
HG01106.hp1
HG03209.hp1
HG03654.hp1
HG04115.hp1
 intron_variant MODIFIER c.519+12030_519+1203
others(14): Show 
c.519+12030_519+12039dupATTTTATTTT
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 4/21 INFO_REALIGN_3_PRIME chrX 21452753
chrX:21452753 C
C
 CTTATTTT
others(8): Show 
CTTATTTTATTTTATT
 1 a0001c0001t0006g0159
a0001c0001t0006g0159
 1 HG02886.hp1
HG02886.hp1
 intron_variant MODIFIER c.519+12025_519+1203
others(19): Show 
c.519+12025_519+12039dupATTTTATTTTATTTT
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 4/21 INFO_REALIGN_3_PRIME chrX 21452753
chrX:21452753 C
C
 CTTATTTT
others(13): Show 
CTTATTTTATTTTATTTTATT
 1 a0001c0001t0017g0146
a0001c0001t0017g0146
 1 HG01109.hp1
HG01109.hp1
 intron_variant MODIFIER c.519+12020_519+1203
others(24): Show 
c.519+12020_519+12039dupATTTTATTTTATTTTATTTT
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 4/21 INFO_REALIGN_3_PRIME chrX 21452753
chrX:21452753 CTTATT
CTTATT
 C
C
 27 a0001c0001t0001g0073
a0001c0001t0001g0102
a0001c0001t0001g0103
others(24): Show 
a0001c0001t0001g0073
a0001c0001t0001g0102
a0001c0001t0001g0103
a0001c0001t0002g0043
a0001c0001t0002g0046
a0001c0001t0002g0047
a0001c0001t0002g0050
a0001c0001t0002g0110
a0001c0001t0002g0118
a0001c0001t0002g0119
a0001c0001t0002g0120
a0001c0001t0002g0121
a0001c0001t0002g0122
a0001c0001t0002g0125
a0001c0001t0002g0126
a0001c0001t0003g0070
a0001c0001t0003g0136
a0001c0001t0004g0055
a0001c0001t0004g0129
a0001c0001t0007g0140
a0001c0001t0008g0124
a0001c0001t0008g0135
a0001c0001t0008g0143
a0001c0001t0012g0045
a0001c0001t0017g0018
a0001c0001t0039g0144
a0001c0001t0040g0027
 27 HG00609.hp1
HG01071.hp2
HG01258.hp1
others(24): Show 
HG00609.hp1
HG01071.hp2
HG01258.hp1
HG01515.hp1
HG02074.hp1
HG02083.hp1
HG02145.hp1
HG02809.hp2
HG02922.hp1
HG03491.hp1
HG03492.hp1
NA18612.hp1
NA18943.hp1
NA18944.hp1
NA18965.hp1
NA18966.hp1
NA18986.hp1
NA18990.hp1
NA18994.hp1
NA19000.hp1
NA19012.hp1
NA19043.hp1
NA19055.hp1
NA19070.hp1
NA19076.hp1
NA19086.hp1
NA19091.hp1
 intron_variant MODIFIER c.519+12035_519+1203
others(9): Show 
c.519+12035_519+12039delATTTT
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 4/21 INFO_REALIGN_3_PRIME chrX 21452753
chrX:21452753 CTTATTTT
others(3): Show 
CTTATTTTATT
 C
C
 13 a0001c0001t0001g0037
a0001c0001t0001g0048
a0001c0001t0001g0053
others(10): Show 
a0001c0001t0001g0037
a0001c0001t0001g0048
a0001c0001t0001g0053
a0001c0001t0001g0060
a0001c0001t0001g0067
a0001c0001t0002g0004
a0001c0001t0003g0024
a0001c0001t0003g0029
a0001c0001t0008g0005
a0001c0001t0022g0033
a0001c0001t0027g0034
a0001c0001t0031g0065
a0001c0007t0036g0026
 13 HG00280.hp1
HG00673.hp1
HG01069.hp1
others(10): Show 
HG00280.hp1
HG00673.hp1
HG01069.hp1
HG01071.hp1
HG01081.hp1
HG02040.hp1
HG02055.hp1
HG02135.hp1
HG02280.hp1
HG02486.hp1
HG02895.hp1
HG03041.hp2
NA18952.hp1
 intron_variant MODIFIER c.519+12030_519+1203
others(14): Show 
c.519+12030_519+12039delATTTTATTTT
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 4/21 INFO_REALIGN_3_PRIME chrX 21452753
chrX:21452753 CTTATTTT
others(8): Show 
CTTATTTTATTTTATT
 C
C
 6 a0001c0001t0009g0010
a0001c0001t0009g0011
a0001c0001t0009g0012
others(3): Show 
a0001c0001t0009g0010
a0001c0001t0009g0011
a0001c0001t0009g0012
a0001c0001t0009g0013
a0001c0001t0019g0014
a0001c0001t0041g0009
 6 HG01884.hp2
HG02280.hp2
HG02572.hp1
others(3): Show 
HG01884.hp2
HG02280.hp2
HG02572.hp1
HG02809.hp1
HG03098.hp1
HG03486.hp1
 intron_variant MODIFIER c.519+12025_519+1203
others(19): Show 
c.519+12025_519+12039delATTTTATTTTATTTT
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 4/21 INFO_REALIGN_3_PRIME chrX 21452753
chrX:21452753 CTTATTTT
others(13): Show 
CTTATTTTATTTTATTTTATT
 C
C
 3 a0001c0001t0001g0068
a0001c0001t0001g0069
a0001c0001t0033g0002
a0001c0001t0001g0068
a0001c0001t0001g0069
a0001c0001t0033g0002
 3 NA18989.hp1
NA19006.hp1
NA19085.hp1
NA18989.hp1
NA19006.hp1
NA19085.hp1
 intron_variant MODIFIER c.519+12020_519+1203
others(24): Show 
c.519+12020_519+12039delATTTTATTTTATTTTATTTT
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 4/21 INFO_REALIGN_3_PRIME chrX 21452753
chrX:21452756 A
A
 ATTTTATT
others(15): Show 
ATTTTATTTTATTTTATTTTATT
 3 a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
 3 HG02615.hp1
HG02965.hp1
HG03471.hp1
HG02615.hp1
HG02965.hp1
HG03471.hp1
 intron_variant MODIFIER c.519+11978_519+1199
others(26): Show 
c.519+11978_519+11999dupTTATTTTATTTTATTTTATTTT
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 4/21 INFO_REALIGN_3_PRIME chrX 21452756
chrX:21452830 A
A
 C
C
 1 a0001c0001t0004g0129
a0001c0001t0004g0129
 1 HG00609.hp1
HG00609.hp1
 intron_variant MODIFIER c.519+12049A>C
c.519+12049A>C
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 4/21 chrX 21452830
chrX:21453137 G
G
 C
C
 3 a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
 3 HG02615.hp1
HG02965.hp1
HG03471.hp1
HG02615.hp1
HG02965.hp1
HG03471.hp1
 intron_variant MODIFIER c.519+12356G>C
c.519+12356G>C
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 4/21 chrX 21453137
chrX:21453137 GA
GA
 G
G
 1 a0001c0001t0001g0051
a0001c0001t0001g0051
 1 HG01074.hp1
HG01074.hp1
 intron_variant MODIFIER c.519+12357delA
c.519+12357delA
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 4/21 chrX 21453137
chrX:21453394 TA
TA
 T
T
 7 a0001c0001t0001g0039
a0001c0001t0001g0078
a0001c0001t0001g0081
others(4): Show 
a0001c0001t0001g0039
a0001c0001t0001g0078
a0001c0001t0001g0081
a0001c0001t0001g0082
a0001c0001t0001g0083
a0001c0001t0001g0084
a0001c0001t0007g0127
 7 HG00642.hp1
HG01261.hp1
HG01928.hp1
others(4): Show 
HG00642.hp1
HG01261.hp1
HG01928.hp1
NA19009.hp1
NA19072.hp1
NA19089.hp1
NA20300.hp1
 intron_variant MODIFIER c.519+12615delA
c.519+12615delA
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 4/21 INFO_REALIGN_3_PRIME chrX 21453394
chrX:21453693 T
T
 A
A
 3 a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
 3 HG02615.hp1
HG02965.hp1
HG03471.hp1
HG02615.hp1
HG02965.hp1
HG03471.hp1
 intron_variant MODIFIER c.519+12912T>A
c.519+12912T>A
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 4/21 chrX 21453693
chrX:21453859 G
G
 A
A
 3 a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
 3 HG02615.hp1
HG02965.hp1
HG03471.hp1
HG02615.hp1
HG02965.hp1
HG03471.hp1
 intron_variant MODIFIER c.519+13078G>A
c.519+13078G>A
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 4/21 chrX 21453859
chrX:21453860 G
G
 T
T
 3 a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
 3 HG02615.hp1
HG02965.hp1
HG03471.hp1
HG02615.hp1
HG02965.hp1
HG03471.hp1
 intron_variant MODIFIER c.519+13079G>T
c.519+13079G>T
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 4/21 chrX 21453860
chrX:21454415 A
A
 G
G
 1 a0001c0001t0007g0140
a0001c0001t0007g0140
 1 HG02922.hp1
HG02922.hp1
 intron_variant MODIFIER c.519+13634A>G
c.519+13634A>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 4/21 chrX 21454415
chrX:21454469 C
C
 T
T
 1 a0001c0001t0002g0114
a0001c0001t0002g0114
 1 HG00140.hp1
HG00140.hp1
 intron_variant MODIFIER c.519+13688C>T
c.519+13688C>T
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 4/21 chrX 21454469
chrX:21454785 C
C
 T
T
 2 a0001c0001t0003g0116
a0001c0001t0004g0117
a0001c0001t0003g0116
a0001c0001t0004g0117
 2 HG02015.hp1
HG03017.hp1
HG02015.hp1
HG03017.hp1
 intron_variant MODIFIER c.519+14004C>T
c.519+14004C>T
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 4/21 chrX 21454785
chrX:21454884 G
G
 A
A
 4 a0001c0001t0001g0039
a0001c0001t0001g0082
a0001c0001t0001g0083
others(1): Show 
a0001c0001t0001g0039
a0001c0001t0001g0082
a0001c0001t0001g0083
a0001c0001t0001g0084
 4 HG00642.hp1
HG01261.hp1
HG01928.hp1
others(1): Show 
HG00642.hp1
HG01261.hp1
HG01928.hp1
NA20300.hp1
 intron_variant MODIFIER c.519+14103G>A
c.519+14103G>A
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 4/21 chrX 21454884
chrX:21455403 G
G
 C
C
 1 a0001c0001t0012g0142
a0001c0001t0012g0142
 1 HG03139.hp1
HG03139.hp1
 intron_variant MODIFIER c.519+14622G>C
c.519+14622G>C
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 4/21 chrX 21455403
chrX:21456017 C
C
 T
T
 3 a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
 3 HG02615.hp1
HG02965.hp1
HG03471.hp1
HG02615.hp1
HG02965.hp1
HG03471.hp1
 intron_variant MODIFIER c.520-14749C>T
c.520-14749C>T
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 4/21 chrX 21456017
chrX:21456025 A
A
 C
C
 1 a0001c0001t0020g0141
a0001c0001t0020g0141
 1 HG01243.hp1
HG01243.hp1
 intron_variant MODIFIER c.520-14741A>C
c.520-14741A>C
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 4/21 chrX 21456025
chrX:21456361 T
T
 C
C
 1 a0001c0001t0042g0008
a0001c0001t0042g0008
 1 HG02647.hp1
HG02647.hp1
 intron_variant MODIFIER c.520-14405T>C
c.520-14405T>C
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 4/21 chrX 21456361
chrX:21456685 G
G
 C
C
 1 a0001c0001t0012g0045
a0001c0001t0012g0045
 1 HG02145.hp1
HG02145.hp1
 intron_variant MODIFIER c.520-14081G>C
c.520-14081G>C
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 4/21 chrX 21456685
chrX:21456965 G
G
 A
A
 1 a0001c0001t0012g0045
a0001c0001t0012g0045
 1 HG02145.hp1
HG02145.hp1
 intron_variant MODIFIER c.520-13801G>A
c.520-13801G>A
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 4/21 chrX 21456965
chrX:21456968 A
A
 G
G
 2 a0001c0001t0007g0140
a0001c0001t0020g0141
a0001c0001t0007g0140
a0001c0001t0020g0141
 2 HG01243.hp1
HG02922.hp1
HG01243.hp1
HG02922.hp1
 intron_variant MODIFIER c.520-13798A>G
c.520-13798A>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 4/21 chrX 21456968
chrX:21456977 A
A
 AT
AT
 1 a0001c0001t0001g0036
a0001c0001t0001g0036
 1 HG04115.hp1
HG04115.hp1
 intron_variant MODIFIER c.520-13783dupT
c.520-13783dupT
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 4/21 INFO_REALIGN_3_PRIME chrX 21456977
chrX:21457110 T
T
 C
C
 3 a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
 3 HG02615.hp1
HG02965.hp1
HG03471.hp1
HG02615.hp1
HG02965.hp1
HG03471.hp1
 intron_variant MODIFIER c.520-13656T>C
c.520-13656T>C
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 4/21 chrX 21457110
chrX:21457247 G
G
 A
A
 1 a0001c0001t0001g0053
a0001c0001t0001g0053
 1 HG00280.hp1
HG00280.hp1
 intron_variant MODIFIER c.520-13519G>A
c.520-13519G>A
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 4/21 chrX 21457247
chrX:21457508 T
T
 C
C
 1 a0001c0001t0003g0151
a0001c0001t0003g0151
 1 HG01081.hp2
HG01081.hp2
 intron_variant MODIFIER c.520-13258T>C
c.520-13258T>C
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 4/21 chrX 21457508
chrX:21457658 T
T
 C
C
 1 a0001c0001t0003g0151
a0001c0001t0003g0151
 1 HG01081.hp2
HG01081.hp2
 intron_variant MODIFIER c.520-13108T>C
c.520-13108T>C
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 4/21 chrX 21457658
chrX:21457925 A
A
 G
G
 1 a0001c0002t0001g0105
a0001c0002t0001g0105
 1 HG01943.hp1
HG01943.hp1
 intron_variant MODIFIER c.520-12841A>G
c.520-12841A>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 4/21 chrX 21457925
chrX:21458010 G
G
 A
A
 1 a0001c0001t0002g0126
a0001c0001t0002g0126
 1 NA18943.hp1
NA18943.hp1
 intron_variant MODIFIER c.520-12756G>A
c.520-12756G>A
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 4/21 chrX 21458010
chrX:21458215 A
A
 G
G
 3 a0001c0001t0003g0015
a0001c0001t0011g0016
a0001c0001t0011g0138
a0001c0001t0003g0015
a0001c0001t0011g0016
a0001c0001t0011g0138
 3 HG02717.hp1
HG03041.hp1
NA18522.hp1
HG02717.hp1
HG03041.hp1
NA18522.hp1
 intron_variant MODIFIER c.520-12551A>G
c.520-12551A>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 4/21 chrX 21458215
chrX:21458426 G
G
 T
T
 1 a0001c0001t0020g0141
a0001c0001t0020g0141
 1 HG01243.hp1
HG01243.hp1
 intron_variant MODIFIER c.520-12340G>T
c.520-12340G>T
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 4/21 chrX 21458426
chrX:21459018 C
C
 CT
CT
 8 a0001c0001t0009g0010
a0001c0001t0009g0012
a0001c0001t0009g0013
others(5): Show 
a0001c0001t0009g0010
a0001c0001t0009g0012
a0001c0001t0009g0013
a0001c0001t0018g0123
a0001c0001t0019g0014
a0001c0001t0033g0002
a0001c0001t0041g0009
a0001c0002t0007g0040
 8 HG01358.hp1
HG01884.hp2
HG02027.hp1
others(5): Show 
HG01358.hp1
HG01884.hp2
HG02027.hp1
HG02280.hp2
HG02572.hp1
HG03098.hp1
HG03486.hp1
NA19006.hp1
 intron_variant MODIFIER c.520-11727dupT
c.520-11727dupT
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 4/21 INFO_REALIGN_3_PRIME chrX 21459018
chrX:21459018 C
C
 CTTT
CTTT
 3 a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
 3 HG02615.hp1
HG02965.hp1
HG03471.hp1
HG02615.hp1
HG02965.hp1
HG03471.hp1
 intron_variant MODIFIER c.520-11729_520-1172
others(7): Show 
c.520-11729_520-11727dupTTT
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 4/21 INFO_REALIGN_3_PRIME chrX 21459018
chrX:21459018 CT
CT
 C
C
 8 a0001c0001t0001g0081
a0001c0001t0001g0089
a0001c0001t0001g0090
others(5): Show 
a0001c0001t0001g0081
a0001c0001t0001g0089
a0001c0001t0001g0090
a0001c0001t0001g0128
a0001c0001t0001g0145
a0001c0001t0004g0117
a0001c0001t0005g0095
a0001c0001t0039g0144
 8 HG02015.hp1
NA18960.hp1
NA19005.hp1
others(5): Show 
HG02015.hp1
NA18960.hp1
NA19005.hp1
NA19055.hp1
NA19066.hp1
NA19082.hp1
NA19088.hp1
NA19089.hp1
 intron_variant MODIFIER c.520-11727delT
c.520-11727delT
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 4/21 INFO_REALIGN_3_PRIME chrX 21459018
chrX:21459108 C
C
 T
T
 1 a0001c0001t0029g0023
a0001c0001t0029g0023
 1 HG01099.hp1
HG01099.hp1
 intron_variant MODIFIER c.520-11658C>T
c.520-11658C>T
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 4/21 chrX 21459108
chrX:21459182 C
C
 G
G
 3 a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
 3 HG02615.hp1
HG02965.hp1
HG03471.hp1
HG02615.hp1
HG02965.hp1
HG03471.hp1
 intron_variant MODIFIER c.520-11584C>G
c.520-11584C>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 4/21 chrX 21459182
chrX:21459213 A
A
 G
G
 3 a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
 3 HG02615.hp1
HG02965.hp1
HG03471.hp1
HG02615.hp1
HG02965.hp1
HG03471.hp1
 intron_variant MODIFIER c.520-11553A>G
c.520-11553A>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 4/21 chrX 21459213
chrX:21459244 G
G
 A
A
 1 a0001c0001t0001g0134
a0001c0001t0001g0134
 1 HG02071.hp1
HG02071.hp1
 intron_variant MODIFIER c.520-11522G>A
c.520-11522G>A
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 4/21 chrX 21459244
chrX:21459375 G
G
 A
A
 1 a0001c0001t0001g0076
a0001c0001t0001g0076
 1 NA18982.hp1
NA18982.hp1
 intron_variant MODIFIER c.520-11391G>A
c.520-11391G>A
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 4/21 chrX 21459375
chrX:21459523 G
G
 T
T
 1 a0001c0001t0003g0151
a0001c0001t0003g0151
 1 HG01081.hp2
HG01081.hp2
 intron_variant MODIFIER c.520-11243G>T
c.520-11243G>T
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 4/21 chrX 21459523
chrX:21459541 G
G
 T
T
 3 a0001c0001t0002g0003
a0001c0001t0002g0110
a0001c0001t0008g0124
a0001c0001t0002g0003
a0001c0001t0002g0110
a0001c0001t0008g0124
 3 HG00621.hp1
HG02074.hp1
NA19012.hp1
HG00621.hp1
HG02074.hp1
NA19012.hp1
 intron_variant MODIFIER c.520-11225G>T
c.520-11225G>T
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 4/21 chrX 21459541
chrX:21460540 C
C
 T
T
 67 a0001c0001t0001g0158
a0001c0001t0002g0003
a0001c0001t0002g0004
others(64): Show 
a0001c0001t0001g0158
a0001c0001t0002g0003
a0001c0001t0002g0004
a0001c0001t0002g0019
a0001c0001t0002g0028
a0001c0001t0002g0046
a0001c0001t0002g0047
a0001c0001t0002g0049
a0001c0001t0002g0050
a0001c0001t0002g0110
a0001c0001t0002g0111
a0001c0001t0002g0112
a0001c0001t0002g0113
a0001c0001t0002g0114
a0001c0001t0002g0118
a0001c0001t0002g0119
a0001c0001t0002g0120
a0001c0001t0002g0121
a0001c0001t0002g0122
a0001c0001t0002g0125
a0001c0001t0002g0126
a0001c0001t0003g0015
a0001c0001t0003g0024
a0001c0001t0003g0029
a0001c0001t0003g0031
a0001c0001t0003g0151
a0001c0001t0006g0155
a0001c0001t0006g0157
a0001c0001t0006g0159
a0001c0001t0006g0160
a0001c0001t0006g0161
a0001c0001t0007g0140
a0001c0001t0008g0005
a0001c0001t0008g0124
a0001c0001t0008g0135
a0001c0001t0008g0143
a0001c0001t0009g0010
a0001c0001t0009g0011
a0001c0001t0009g0012
a0001c0001t0009g0013
a0001c0001t0010g0152
a0001c0001t0010g0153
a0001c0001t0010g0162
a0001c0001t0011g0016
a0001c0001t0011g0017
a0001c0001t0011g0138
a0001c0001t0012g0025
a0001c0001t0012g0045
a0001c0001t0012g0142
a0001c0001t0017g0018
a0001c0001t0017g0146
a0001c0001t0019g0014
a0001c0001t0020g0141
a0001c0001t0022g0033
a0001c0001t0024g0156
a0001c0001t0027g0034
a0001c0001t0038g0150
a0001c0001t0039g0144
a0001c0001t0040g0027
a0001c0001t0041g0009
a0001c0001t0042g0008
a0001c0001t0043g0007
a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
a0001c0007t0036g0026
a0003c0004t0006g0154
 67 HG00140.hp1
HG00621.hp1
HG00735.hp1
others(64): Show 
HG00140.hp1
HG00621.hp1
HG00735.hp1
HG00741.hp2
HG01069.hp1
HG01071.hp1
HG01071.hp2
HG01081.hp1
HG01081.hp2
HG01106.hp1
HG01109.hp1
HG01243.hp1
HG01433.hp1
HG01884.hp1
HG01884.hp2
HG02055.hp1
HG02074.hp1
HG02083.hp1
HG02145.hp1
HG02258.hp1
HG02280.hp1
HG02280.hp2
HG02486.hp1
HG02572.hp1
HG02615.hp1
HG02615.hp2
HG02647.hp1
HG02717.hp1
HG02809.hp1
HG02886.hp1
HG02895.hp1
HG02922.hp1
HG02922.hp2
HG02965.hp1
HG02976.hp1
HG02976.hp2
HG03041.hp1
HG03098.hp1
HG03130.hp1
HG03139.hp1
HG03209.hp1
HG03225.hp1
HG03471.hp1
HG03486.hp1
HG03486.hp2
HG03491.hp2
HG03516.hp1
HG03579.hp1
NA18522.hp1
NA18612.hp1
NA18943.hp1
NA18944.hp1
NA18966.hp1
NA18986.hp1
NA18990.hp1
NA19000.hp1
NA19004.hp1
NA19012.hp1
NA19043.hp1
NA19055.hp1
NA19070.hp1
NA19076.hp1
NA19086.hp1
NA19091.hp1
NA19240.hp1
NA19240.hp2
NA20300.hp2
 intron_variant MODIFIER c.520-10226C>T
c.520-10226C>T
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 4/21 chrX 21460540
chrX:21460672 C
C
 T
T
 1 a0001c0001t0003g0151
a0001c0001t0003g0151
 1 HG01081.hp2
HG01081.hp2
 intron_variant MODIFIER c.520-10094C>T
c.520-10094C>T
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 4/21 chrX 21460672
chrX:21460865 A
A
 G
G
 1 a0001c0001t0012g0045
a0001c0001t0012g0045
 1 HG02145.hp1
HG02145.hp1
 intron_variant MODIFIER c.520-9901A>G
c.520-9901A>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 4/21 chrX 21460865
chrX:21461074 A
A
 G
G
 162 a0001c0001t0001g0001
a0001c0001t0001g0035
a0001c0001t0001g0036
others(159): Show 
a0001c0001t0001g0001
a0001c0001t0001g0035
a0001c0001t0001g0036
a0001c0001t0001g0037
a0001c0001t0001g0039
a0001c0001t0001g0048
a0001c0001t0001g0051
a0001c0001t0001g0052
a0001c0001t0001g0053
a0001c0001t0001g0058
a0001c0001t0001g0060
a0001c0001t0001g0062
a0001c0001t0001g0067
a0001c0001t0001g0068
a0001c0001t0001g0069
a0001c0001t0001g0071
a0001c0001t0001g0073
a0001c0001t0001g0074
a0001c0001t0001g0075
a0001c0001t0001g0076
a0001c0001t0001g0077
a0001c0001t0001g0078
a0001c0001t0001g0080
a0001c0001t0001g0081
a0001c0001t0001g0082
a0001c0001t0001g0083
a0001c0001t0001g0084
a0001c0001t0001g0087
a0001c0001t0001g0089
a0001c0001t0001g0090
a0001c0001t0001g0093
a0001c0001t0001g0094
a0001c0001t0001g0096
a0001c0001t0001g0097
a0001c0001t0001g0102
a0001c0001t0001g0103
a0001c0001t0001g0109
a0001c0001t0001g0128
a0001c0001t0001g0131
a0001c0001t0001g0134
a0001c0001t0001g0137
a0001c0001t0001g0145
a0001c0001t0001g0158
a0001c0001t0002g0003
a0001c0001t0002g0004
a0001c0001t0002g0019
a0001c0001t0002g0028
a0001c0001t0002g0043
a0001c0001t0002g0046
a0001c0001t0002g0047
a0001c0001t0002g0049
a0001c0001t0002g0050
a0001c0001t0002g0110
a0001c0001t0002g0111
a0001c0001t0002g0112
a0001c0001t0002g0113
a0001c0001t0002g0114
a0001c0001t0002g0115
a0001c0001t0002g0118
a0001c0001t0002g0119
a0001c0001t0002g0120
a0001c0001t0002g0121
a0001c0001t0002g0122
a0001c0001t0002g0125
a0001c0001t0002g0126
a0001c0001t0003g0015
a0001c0001t0003g0024
a0001c0001t0003g0029
a0001c0001t0003g0031
a0001c0001t0003g0044
a0001c0001t0003g0061
a0001c0001t0003g0070
a0001c0001t0003g0101
a0001c0001t0003g0116
a0001c0001t0003g0133
a0001c0001t0003g0136
a0001c0001t0003g0151
a0001c0001t0004g0020
a0001c0001t0004g0021
a0001c0001t0004g0055
a0001c0001t0004g0056
a0001c0001t0004g0057
a0001c0001t0004g0064
a0001c0001t0004g0117
a0001c0001t0004g0129
a0001c0001t0004g0132
a0001c0001t0005g0063
a0001c0001t0005g0072
a0001c0001t0005g0079
a0001c0001t0005g0095
a0001c0001t0005g0099
a0001c0001t0006g0155
a0001c0001t0006g0157
a0001c0001t0006g0159
a0001c0001t0006g0160
a0001c0001t0006g0161
a0001c0001t0007g0022
a0001c0001t0007g0127
a0001c0001t0007g0140
a0001c0001t0008g0005
a0001c0001t0008g0124
a0001c0001t0008g0135
a0001c0001t0008g0143
a0001c0001t0009g0010
a0001c0001t0009g0011
a0001c0001t0009g0012
a0001c0001t0009g0013
a0001c0001t0010g0152
a0001c0001t0010g0153
a0001c0001t0010g0162
a0001c0001t0011g0016
a0001c0001t0011g0017
a0001c0001t0011g0138
a0001c0001t0012g0025
a0001c0001t0012g0045
a0001c0001t0012g0142
a0001c0001t0013g0066
a0001c0001t0013g0100
a0001c0001t0015g0038
a0001c0001t0015g0098
a0001c0001t0016g0032
a0001c0001t0016g0085
a0001c0001t0017g0018
a0001c0001t0017g0146
a0001c0001t0018g0123
a0001c0001t0019g0014
a0001c0001t0020g0141
a0001c0001t0021g0088
a0001c0001t0022g0033
a0001c0001t0023g0006
a0001c0001t0024g0156
a0001c0001t0025g0130
a0001c0001t0027g0034
a0001c0001t0029g0023
a0001c0001t0030g0086
a0001c0001t0031g0065
a0001c0001t0032g0163
a0001c0001t0033g0002
a0001c0001t0034g0091
a0001c0001t0035g0054
a0001c0001t0037g0092
a0001c0001t0038g0150
a0001c0001t0039g0144
a0001c0001t0040g0027
a0001c0001t0041g0009
a0001c0001t0042g0008
a0001c0001t0043g0007
a0001c0002t0001g0042
a0001c0002t0001g0104
a0001c0002t0001g0105
a0001c0002t0001g0107
a0001c0002t0001g0108
a0001c0002t0005g0106
a0001c0002t0007g0040
a0001c0002t0007g0041
a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
a0001c0006t0028g0059
a0001c0007t0036g0026
a0002c0005t0003g0030
a0003c0004t0006g0154
 162 HG00140.hp1
HG00280.hp1
HG00609.hp1
others(159): Show 
HG00140.hp1
HG00280.hp1
HG00609.hp1
HG00621.hp1
HG00642.hp1
HG00673.hp1
HG00735.hp1
HG00735.hp2
HG00738.hp1
HG00741.hp1
HG00741.hp2
HG01069.hp1
HG01071.hp1
HG01071.hp2
HG01074.hp1
HG01081.hp1
HG01081.hp2
HG01099.hp1
HG01106.hp1
HG01109.hp1
HG01167.hp1
HG01192.hp1
HG01243.hp1
HG01255.hp1
HG01256.hp1
HG01258.hp1
HG01261.hp1
HG01358.hp1
HG01433.hp1
HG01515.hp1
HG01884.hp1
HG01884.hp2
HG01928.hp1
HG01934.hp1
HG01943.hp1
HG01952.hp1
HG02015.hp1
HG02027.hp1
HG02040.hp1
HG02055.hp1
HG02056.hp1
HG02071.hp1
HG02074.hp1
HG02083.hp1
HG02129.hp1
HG02132.hp1
HG02135.hp1
HG02145.hp1
HG02258.hp1
HG02280.hp1
HG02280.hp2
HG02300.hp1
HG02486.hp1
HG02572.hp1
HG02602.hp1
HG02615.hp1
HG02615.hp2
HG02647.hp1
HG02698.hp1
HG02717.hp1
HG02735.hp1
HG02738.hp1
HG02809.hp1
HG02809.hp2
HG02886.hp1
HG02886.hp2
HG02895.hp1
HG02922.hp1
HG02922.hp2
HG02965.hp1
HG02976.hp1
HG02976.hp2
HG03017.hp1
HG03041.hp1
HG03041.hp2
HG03098.hp1
HG03130.hp1
HG03139.hp1
HG03209.hp1
HG03225.hp1
HG03471.hp1
HG03486.hp1
HG03486.hp2
HG03490.hp1
HG03491.hp1
HG03491.hp2
HG03492.hp1
HG03516.hp1
HG03516.hp2
HG03579.hp1
HG03654.hp1
HG03688.hp1
HG03710.hp1
HG03942.hp1
HG04115.hp1
HG04199.hp1
HG04204.hp1
HG04228.hp1
NA18522.hp1
NA18612.hp1
NA18747.hp1
NA18943.hp1
NA18944.hp1
NA18945.hp1
NA18948.hp1
NA18952.hp1
NA18953.hp1
NA18955.hp1
NA18959.hp1
NA18960.hp1
NA18961.hp1
NA18962.hp1
NA18965.hp1
NA18966.hp1
NA18967.hp1
NA18970.hp1
NA18971.hp1
NA18974.hp1
NA18977.hp1
NA18982.hp1
NA18983.hp1
NA18984.hp1
NA18986.hp1
NA18988.hp1
NA18989.hp1
NA18990.hp1
NA18994.hp1
NA18995.hp1
NA19000.hp1
NA19004.hp1
NA19005.hp1
NA19006.hp1
NA19007.hp1
NA19009.hp1
NA19012.hp1
NA19043.hp1
NA19055.hp1
NA19056.hp1
NA19058.hp1
NA19060.hp1
NA19062.hp1
NA19063.hp1
NA19066.hp1
NA19068.hp1
NA19070.hp1
NA19072.hp1
NA19076.hp1
NA19079.hp1
NA19082.hp1
NA19085.hp1
NA19086.hp1
NA19088.hp1
NA19089.hp1
NA19091.hp1
NA19240.hp1
NA19240.hp2
NA20300.hp1
NA20300.hp2
NA20752.hp1
NA20805.hp1
NA20905.hp1
homoSapiens_chm13v2.hp1
 intron_variant MODIFIER c.520-9692A>G
c.520-9692A>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 4/21 chrX 21461074
chrX:21461233 G
G
 A
A
 6 a0001c0001t0009g0010
a0001c0001t0009g0011
a0001c0001t0009g0012
others(3): Show 
a0001c0001t0009g0010
a0001c0001t0009g0011
a0001c0001t0009g0012
a0001c0001t0009g0013
a0001c0001t0019g0014
a0001c0001t0041g0009
 6 HG01884.hp2
HG02280.hp2
HG02572.hp1
others(3): Show 
HG01884.hp2
HG02280.hp2
HG02572.hp1
HG02809.hp1
HG03098.hp1
HG03486.hp1
 intron_variant MODIFIER c.520-9533G>A
c.520-9533G>A
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 4/21 chrX 21461233
chrX:21461478 T
T
 G
G
 2 a0001c0001t0007g0140
a0001c0001t0020g0141
a0001c0001t0007g0140
a0001c0001t0020g0141
 2 HG01243.hp1
HG02922.hp1
HG01243.hp1
HG02922.hp1
 intron_variant MODIFIER c.520-9288T>G
c.520-9288T>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 4/21 chrX 21461478
chrX:21461490 C
C
 G
G
 1 a0001c0001t0003g0151
a0001c0001t0003g0151
 1 HG01081.hp2
HG01081.hp2
 intron_variant MODIFIER c.520-9276C>G
c.520-9276C>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 4/21 chrX 21461490
chrX:21461699 A
A
 G
G
 1 a0001c0001t0019g0014
a0001c0001t0019g0014
 1 HG01884.hp2
HG01884.hp2
 intron_variant MODIFIER c.520-9067A>G
c.520-9067A>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 4/21 chrX 21461699
chrX:21461938 A
A
 G
G
 1 a0001c0001t0023g0006
a0001c0001t0023g0006
 1 HG03654.hp1
HG03654.hp1
 intron_variant MODIFIER c.520-8828A>G
c.520-8828A>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 4/21 chrX 21461938
chrX:21462121 G
G
 T
T
 1 a0001c0001t0002g0043
a0001c0001t0002g0043
 1 HG02809.hp2
HG02809.hp2
 intron_variant MODIFIER c.520-8645G>T
c.520-8645G>T
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 4/21 chrX 21462121
chrX:21462211 A
A
 G
G
 1 a0001c0001t0012g0142
a0001c0001t0012g0142
 1 HG03139.hp1
HG03139.hp1
 intron_variant MODIFIER c.520-8555A>G
c.520-8555A>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 4/21 chrX 21462211
chrX:21462714 A
A
 AT
AT
 42 a0001c0001t0001g0035
a0001c0001t0001g0039
a0001c0001t0001g0158
others(39): Show 
a0001c0001t0001g0035
a0001c0001t0001g0039
a0001c0001t0001g0158
a0001c0001t0002g0003
a0001c0001t0002g0028
a0001c0001t0002g0110
a0001c0001t0003g0015
a0001c0001t0003g0024
a0001c0001t0003g0029
a0001c0001t0003g0151
a0001c0001t0004g0064
a0001c0001t0006g0155
a0001c0001t0006g0157
a0001c0001t0006g0159
a0001c0001t0006g0160
a0001c0001t0006g0161
a0001c0001t0007g0140
a0001c0001t0008g0124
a0001c0001t0009g0010
a0001c0001t0009g0011
a0001c0001t0009g0012
a0001c0001t0009g0013
a0001c0001t0010g0152
a0001c0001t0010g0153
a0001c0001t0010g0162
a0001c0001t0011g0016
a0001c0001t0011g0017
a0001c0001t0011g0138
a0001c0001t0012g0025
a0001c0001t0017g0018
a0001c0001t0017g0146
a0001c0001t0019g0014
a0001c0001t0020g0141
a0001c0001t0023g0006
a0001c0001t0024g0156
a0001c0001t0038g0150
a0001c0001t0040g0027
a0001c0001t0041g0009
a0001c0001t0042g0008
a0001c0001t0043g0007
a0001c0007t0036g0026
a0003c0004t0006g0154
 42 HG00621.hp1
HG00642.hp1
HG00738.hp1
others(39): Show 
HG00621.hp1
HG00642.hp1
HG00738.hp1
HG01071.hp2
HG01081.hp1
HG01081.hp2
HG01109.hp1
HG01243.hp1
HG01884.hp1
HG01884.hp2
HG02056.hp1
HG02074.hp1
HG02258.hp1
HG02280.hp1
HG02280.hp2
HG02572.hp1
HG02615.hp2
HG02647.hp1
HG02717.hp1
HG02809.hp1
HG02886.hp1
HG02895.hp1
HG02922.hp1
HG02922.hp2
HG02976.hp1
HG03041.hp1
HG03098.hp1
HG03130.hp1
HG03209.hp1
HG03225.hp1
HG03486.hp1
HG03486.hp2
HG03491.hp2
HG03516.hp1
HG03579.hp1
HG03654.hp1
NA18522.hp1
NA19012.hp1
NA19043.hp1
NA19240.hp1
NA19240.hp2
NA20300.hp2
 intron_variant MODIFIER c.520-8035dupT
c.520-8035dupT
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 4/21 INFO_REALIGN_3_PRIME chrX 21462714
chrX:21462714 AT
AT
 A
A
 1 a0001c0001t0012g0142
a0001c0001t0012g0142
 1 HG03139.hp1
HG03139.hp1
 intron_variant MODIFIER c.520-8035delT
c.520-8035delT
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 4/21 INFO_REALIGN_3_PRIME chrX 21462714
chrX:21462881 T
T
 G
G
 3 a0001c0001t0002g0004
a0001c0001t0003g0031
a0001c0001t0008g0005
a0001c0001t0002g0004
a0001c0001t0003g0031
a0001c0001t0008g0005
 3 HG01069.hp1
HG01071.hp1
HG02976.hp2
HG01069.hp1
HG01071.hp1
HG02976.hp2
 intron_variant MODIFIER c.520-7885T>G
c.520-7885T>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 4/21 chrX 21462881
chrX:21462969 G
G
 A
A
 3 a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
 3 HG02615.hp1
HG02965.hp1
HG03471.hp1
HG02615.hp1
HG02965.hp1
HG03471.hp1
 intron_variant MODIFIER c.520-7797G>A
c.520-7797G>A
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 4/21 chrX 21462969
chrX:21463001 C
C
 T
T
 1 a0001c0001t0011g0016
a0001c0001t0011g0016
 1 NA18522.hp1
NA18522.hp1
 intron_variant MODIFIER c.520-7765C>T
c.520-7765C>T
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 4/21 chrX 21463001
chrX:21463313 G
G
 A
A
 2 a0001c0001t0023g0006
a0001c0001t0043g0007
a0001c0001t0023g0006
a0001c0001t0043g0007
 2 HG03491.hp2
HG03654.hp1
HG03491.hp2
HG03654.hp1
 intron_variant MODIFIER c.520-7453G>A
c.520-7453G>A
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 4/21 chrX 21463313
chrX:21463807 T
T
 C
C
 3 a0001c0001t0002g0004
a0001c0001t0003g0031
a0001c0001t0008g0005
a0001c0001t0002g0004
a0001c0001t0003g0031
a0001c0001t0008g0005
 3 HG01069.hp1
HG01071.hp1
HG02976.hp2
HG01069.hp1
HG01071.hp1
HG02976.hp2
 intron_variant MODIFIER c.520-6959T>C
c.520-6959T>C
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 4/21 chrX 21463807
chrX:21464241 C
C
 G
G
 41 a0001c0001t0001g0158
a0001c0001t0002g0028
a0001c0001t0003g0015
others(38): Show 
a0001c0001t0001g0158
a0001c0001t0002g0028
a0001c0001t0003g0015
a0001c0001t0003g0024
a0001c0001t0003g0029
a0001c0001t0003g0151
a0001c0001t0006g0155
a0001c0001t0006g0157
a0001c0001t0006g0159
a0001c0001t0006g0160
a0001c0001t0006g0161
a0001c0001t0007g0140
a0001c0001t0009g0010
a0001c0001t0009g0011
a0001c0001t0009g0012
a0001c0001t0009g0013
a0001c0001t0010g0152
a0001c0001t0010g0153
a0001c0001t0010g0162
a0001c0001t0011g0016
a0001c0001t0011g0017
a0001c0001t0011g0138
a0001c0001t0012g0025
a0001c0001t0017g0018
a0001c0001t0017g0146
a0001c0001t0019g0014
a0001c0001t0020g0141
a0001c0001t0022g0033
a0001c0001t0023g0006
a0001c0001t0024g0156
a0001c0001t0027g0034
a0001c0001t0038g0150
a0001c0001t0040g0027
a0001c0001t0041g0009
a0001c0001t0042g0008
a0001c0001t0043g0007
a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
a0001c0007t0036g0026
a0003c0004t0006g0154
 41 HG01071.hp2
HG01081.hp1
HG01081.hp2
others(38): Show 
HG01071.hp2
HG01081.hp1
HG01081.hp2
HG01109.hp1
HG01243.hp1
HG01884.hp1
HG01884.hp2
HG02055.hp1
HG02258.hp1
HG02280.hp1
HG02280.hp2
HG02486.hp1
HG02572.hp1
HG02615.hp1
HG02615.hp2
HG02647.hp1
HG02717.hp1
HG02809.hp1
HG02886.hp1
HG02895.hp1
HG02922.hp1
HG02922.hp2
HG02965.hp1
HG02976.hp1
HG03041.hp1
HG03098.hp1
HG03130.hp1
HG03209.hp1
HG03225.hp1
HG03471.hp1
HG03486.hp1
HG03486.hp2
HG03491.hp2
HG03516.hp1
HG03579.hp1
HG03654.hp1
NA18522.hp1
NA19043.hp1
NA19240.hp1
NA19240.hp2
NA20300.hp2
 intron_variant MODIFIER c.520-6525C>G
c.520-6525C>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 4/21 chrX 21464241
chrX:21464662 G
G
 A
A
 1 a0001c0001t0003g0024
a0001c0001t0003g0024
 1 HG02280.hp1
HG02280.hp1
 intron_variant MODIFIER c.520-6104G>A
c.520-6104G>A
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 4/21 chrX 21464662
chrX:21464905 A
A
 G
G
 7 a0001c0001t0003g0015
a0001c0001t0011g0016
a0001c0001t0011g0017
others(4): Show 
a0001c0001t0003g0015
a0001c0001t0011g0016
a0001c0001t0011g0017
a0001c0001t0011g0138
a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
 7 HG02615.hp1
HG02717.hp1
HG02965.hp1
others(4): Show 
HG02615.hp1
HG02717.hp1
HG02965.hp1
HG03041.hp1
HG03471.hp1
HG03579.hp1
NA18522.hp1
 intron_variant MODIFIER c.520-5861A>G
c.520-5861A>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 4/21 chrX 21464905
chrX:21465358 A
A
 AT
AT
 1 a0001c0001t0041g0009
a0001c0001t0041g0009
 1 HG03098.hp1
HG03098.hp1
 intron_variant MODIFIER c.520-5407dupT
c.520-5407dupT
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 4/21 INFO_REALIGN_3_PRIME chrX 21465358
chrX:21465701 A
A
 G
G
 1 a0001c0001t0004g0132
a0001c0001t0004g0132
 1 NA20752.hp1
NA20752.hp1
 intron_variant MODIFIER c.520-5065A>G
c.520-5065A>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 4/21 chrX 21465701
chrX:21466105 T
T
 A
A
 1 a0001c0001t0019g0014
a0001c0001t0019g0014
 1 HG01884.hp2
HG01884.hp2
 intron_variant MODIFIER c.520-4661T>A
c.520-4661T>A
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 4/21 chrX 21466105
chrX:21466216 A
A
 G
G
 1 a0001c0001t0002g0050
a0001c0001t0002g0050
 1 NA18944.hp1
NA18944.hp1
 intron_variant MODIFIER c.520-4550A>G
c.520-4550A>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 4/21 chrX 21466216
chrX:21466286 A
A
 T
T
 1 a0001c0001t0042g0008
a0001c0001t0042g0008
 1 HG02647.hp1
HG02647.hp1
 intron_variant MODIFIER c.520-4480A>T
c.520-4480A>T
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 4/21 chrX 21466286
chrX:21466680 A
A
 G
G
 162 a0001c0001t0001g0001
a0001c0001t0001g0035
a0001c0001t0001g0036
others(159): Show 
a0001c0001t0001g0001
a0001c0001t0001g0035
a0001c0001t0001g0036
a0001c0001t0001g0037
a0001c0001t0001g0039
a0001c0001t0001g0048
a0001c0001t0001g0051
a0001c0001t0001g0052
a0001c0001t0001g0053
a0001c0001t0001g0058
a0001c0001t0001g0060
a0001c0001t0001g0062
a0001c0001t0001g0067
a0001c0001t0001g0068
a0001c0001t0001g0069
a0001c0001t0001g0071
a0001c0001t0001g0073
a0001c0001t0001g0074
a0001c0001t0001g0075
a0001c0001t0001g0076
a0001c0001t0001g0077
a0001c0001t0001g0078
a0001c0001t0001g0080
a0001c0001t0001g0081
a0001c0001t0001g0082
a0001c0001t0001g0083
a0001c0001t0001g0084
a0001c0001t0001g0087
a0001c0001t0001g0089
a0001c0001t0001g0090
a0001c0001t0001g0093
a0001c0001t0001g0094
a0001c0001t0001g0096
a0001c0001t0001g0097
a0001c0001t0001g0102
a0001c0001t0001g0103
a0001c0001t0001g0109
a0001c0001t0001g0128
a0001c0001t0001g0131
a0001c0001t0001g0134
a0001c0001t0001g0137
a0001c0001t0001g0145
a0001c0001t0001g0158
a0001c0001t0002g0003
a0001c0001t0002g0004
a0001c0001t0002g0019
a0001c0001t0002g0028
a0001c0001t0002g0043
a0001c0001t0002g0046
a0001c0001t0002g0047
a0001c0001t0002g0049
a0001c0001t0002g0050
a0001c0001t0002g0110
a0001c0001t0002g0111
a0001c0001t0002g0112
a0001c0001t0002g0113
a0001c0001t0002g0114
a0001c0001t0002g0115
a0001c0001t0002g0118
a0001c0001t0002g0119
a0001c0001t0002g0120
a0001c0001t0002g0121
a0001c0001t0002g0122
a0001c0001t0002g0125
a0001c0001t0002g0126
a0001c0001t0003g0015
a0001c0001t0003g0024
a0001c0001t0003g0029
a0001c0001t0003g0031
a0001c0001t0003g0044
a0001c0001t0003g0061
a0001c0001t0003g0070
a0001c0001t0003g0101
a0001c0001t0003g0116
a0001c0001t0003g0133
a0001c0001t0003g0136
a0001c0001t0003g0151
a0001c0001t0004g0020
a0001c0001t0004g0021
a0001c0001t0004g0055
a0001c0001t0004g0056
a0001c0001t0004g0057
a0001c0001t0004g0064
a0001c0001t0004g0117
a0001c0001t0004g0129
a0001c0001t0004g0132
a0001c0001t0005g0063
a0001c0001t0005g0072
a0001c0001t0005g0079
a0001c0001t0005g0095
a0001c0001t0005g0099
a0001c0001t0006g0155
a0001c0001t0006g0157
a0001c0001t0006g0159
a0001c0001t0006g0160
a0001c0001t0006g0161
a0001c0001t0007g0022
a0001c0001t0007g0127
a0001c0001t0007g0140
a0001c0001t0008g0005
a0001c0001t0008g0124
a0001c0001t0008g0135
a0001c0001t0008g0143
a0001c0001t0009g0010
a0001c0001t0009g0011
a0001c0001t0009g0012
a0001c0001t0009g0013
a0001c0001t0010g0152
a0001c0001t0010g0153
a0001c0001t0010g0162
a0001c0001t0011g0016
a0001c0001t0011g0017
a0001c0001t0011g0138
a0001c0001t0012g0025
a0001c0001t0012g0045
a0001c0001t0012g0142
a0001c0001t0013g0066
a0001c0001t0013g0100
a0001c0001t0015g0038
a0001c0001t0015g0098
a0001c0001t0016g0032
a0001c0001t0016g0085
a0001c0001t0017g0018
a0001c0001t0017g0146
a0001c0001t0018g0123
a0001c0001t0019g0014
a0001c0001t0020g0141
a0001c0001t0021g0088
a0001c0001t0022g0033
a0001c0001t0023g0006
a0001c0001t0024g0156
a0001c0001t0025g0130
a0001c0001t0027g0034
a0001c0001t0029g0023
a0001c0001t0030g0086
a0001c0001t0031g0065
a0001c0001t0032g0163
a0001c0001t0033g0002
a0001c0001t0034g0091
a0001c0001t0035g0054
a0001c0001t0037g0092
a0001c0001t0038g0150
a0001c0001t0039g0144
a0001c0001t0040g0027
a0001c0001t0041g0009
a0001c0001t0042g0008
a0001c0001t0043g0007
a0001c0002t0001g0042
a0001c0002t0001g0104
a0001c0002t0001g0105
a0001c0002t0001g0107
a0001c0002t0001g0108
a0001c0002t0005g0106
a0001c0002t0007g0040
a0001c0002t0007g0041
a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
a0001c0006t0028g0059
a0001c0007t0036g0026
a0002c0005t0003g0030
a0003c0004t0006g0154
 162 HG00140.hp1
HG00280.hp1
HG00609.hp1
others(159): Show 
HG00140.hp1
HG00280.hp1
HG00609.hp1
HG00621.hp1
HG00642.hp1
HG00673.hp1
HG00735.hp1
HG00735.hp2
HG00738.hp1
HG00741.hp1
HG00741.hp2
HG01069.hp1
HG01071.hp1
HG01071.hp2
HG01074.hp1
HG01081.hp1
HG01081.hp2
HG01099.hp1
HG01106.hp1
HG01109.hp1
HG01167.hp1
HG01192.hp1
HG01243.hp1
HG01255.hp1
HG01256.hp1
HG01258.hp1
HG01261.hp1
HG01358.hp1
HG01433.hp1
HG01515.hp1
HG01884.hp1
HG01884.hp2
HG01928.hp1
HG01934.hp1
HG01943.hp1
HG01952.hp1
HG02015.hp1
HG02027.hp1
HG02040.hp1
HG02055.hp1
HG02056.hp1
HG02071.hp1
HG02074.hp1
HG02083.hp1
HG02129.hp1
HG02132.hp1
HG02135.hp1
HG02145.hp1
HG02258.hp1
HG02280.hp1
HG02280.hp2
HG02300.hp1
HG02486.hp1
HG02572.hp1
HG02602.hp1
HG02615.hp1
HG02615.hp2
HG02647.hp1
HG02698.hp1
HG02717.hp1
HG02735.hp1
HG02738.hp1
HG02809.hp1
HG02809.hp2
HG02886.hp1
HG02886.hp2
HG02895.hp1
HG02922.hp1
HG02922.hp2
HG02965.hp1
HG02976.hp1
HG02976.hp2
HG03017.hp1
HG03041.hp1
HG03041.hp2
HG03098.hp1
HG03130.hp1
HG03139.hp1
HG03209.hp1
HG03225.hp1
HG03471.hp1
HG03486.hp1
HG03486.hp2
HG03490.hp1
HG03491.hp1
HG03491.hp2
HG03492.hp1
HG03516.hp1
HG03516.hp2
HG03579.hp1
HG03654.hp1
HG03688.hp1
HG03710.hp1
HG03942.hp1
HG04115.hp1
HG04199.hp1
HG04204.hp1
HG04228.hp1
NA18522.hp1
NA18612.hp1
NA18747.hp1
NA18943.hp1
NA18944.hp1
NA18945.hp1
NA18948.hp1
NA18952.hp1
NA18953.hp1
NA18955.hp1
NA18959.hp1
NA18960.hp1
NA18961.hp1
NA18962.hp1
NA18965.hp1
NA18966.hp1
NA18967.hp1
NA18970.hp1
NA18971.hp1
NA18974.hp1
NA18977.hp1
NA18982.hp1
NA18983.hp1
NA18984.hp1
NA18986.hp1
NA18988.hp1
NA18989.hp1
NA18990.hp1
NA18994.hp1
NA18995.hp1
NA19000.hp1
NA19004.hp1
NA19005.hp1
NA19006.hp1
NA19007.hp1
NA19009.hp1
NA19012.hp1
NA19043.hp1
NA19055.hp1
NA19056.hp1
NA19058.hp1
NA19060.hp1
NA19062.hp1
NA19063.hp1
NA19066.hp1
NA19068.hp1
NA19070.hp1
NA19072.hp1
NA19076.hp1
NA19079.hp1
NA19082.hp1
NA19085.hp1
NA19086.hp1
NA19088.hp1
NA19089.hp1
NA19091.hp1
NA19240.hp1
NA19240.hp2
NA20300.hp1
NA20300.hp2
NA20752.hp1
NA20805.hp1
NA20905.hp1
homoSapiens_chm13v2.hp1
 intron_variant MODIFIER c.520-4086A>G
c.520-4086A>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 4/21 chrX 21466680
chrX:21466709 C
C
 T
T
 1 a0001c0001t0006g0157
a0001c0001t0006g0157
 1 HG03130.hp1
HG03130.hp1
 intron_variant MODIFIER c.520-4057C>T
c.520-4057C>T
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 4/21 chrX 21466709
chrX:21466861 AG
AG
 A
A
 1 a0001c0001t0039g0144
a0001c0001t0039g0144
 1 NA19055.hp1
NA19055.hp1
 intron_variant MODIFIER c.520-3903delG
c.520-3903delG
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 4/21 INFO_REALIGN_3_PRIME chrX 21466861
chrX:21467289 TG
TG
 T
T
 1 a0001c0001t0039g0144
a0001c0001t0039g0144
 1 NA19055.hp1
NA19055.hp1
 intron_variant MODIFIER c.520-3474delG
c.520-3474delG
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 4/21 INFO_REALIGN_3_PRIME chrX 21467289
chrX:21467682 G
G
 GTAAGTTC
others(336): Show 
GTAAGTTCTTAATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
TTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCA
GTGGCGCAATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCAT
TCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTA
CGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTT
AGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCT
CCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCCC
 1 a0001c0001t0002g0028
a0001c0001t0002g0028
 1 HG02258.hp1
HG02258.hp1
 intron_variant MODIFIER c.520-3069_520-3068i
others(345): Show 
c.520-3069_520-3068insTTTTTTTTTTTTTTTTTTTTTTTTTTTT
TTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGG
AGTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCA
CGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCG
CCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCAC
CGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCT
CGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCCC
TAAGTTCTTAATTTT
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 4/21 INFO_REALIGN_3_PRIME chrX 21467682
chrX:21467954 T
T
 C
C
 12 a0001c0001t0001g0158
a0001c0001t0006g0155
a0001c0001t0006g0157
others(9): Show 
a0001c0001t0001g0158
a0001c0001t0006g0155
a0001c0001t0006g0157
a0001c0001t0006g0159
a0001c0001t0006g0160
a0001c0001t0006g0161
a0001c0001t0024g0156
a0001c0001t0042g0008
a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
a0003c0004t0006g0154
 12 HG01884.hp1
HG02615.hp1
HG02615.hp2
others(9): Show 
HG01884.hp1
HG02615.hp1
HG02615.hp2
HG02647.hp1
HG02886.hp1
HG02922.hp2
HG02965.hp1
HG02976.hp1
HG03130.hp1
HG03471.hp1
HG03516.hp1
NA20300.hp2
 intron_variant MODIFIER c.520-2812T>C
c.520-2812T>C
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 4/21 chrX 21467954
chrX:21468059 A
A
 T
T
 1 a0001c0001t0007g0140
a0001c0001t0007g0140
 1 HG02922.hp1
HG02922.hp1
 intron_variant MODIFIER c.520-2707A>T
c.520-2707A>T
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 4/21 chrX 21468059
chrX:21468078 T
T
 C
C
 23 a0001c0001t0001g0158
a0001c0001t0003g0015
a0001c0001t0006g0155
others(20): Show 
a0001c0001t0001g0158
a0001c0001t0003g0015
a0001c0001t0006g0155
a0001c0001t0006g0157
a0001c0001t0006g0159
a0001c0001t0006g0160
a0001c0001t0006g0161
a0001c0001t0009g0010
a0001c0001t0009g0011
a0001c0001t0009g0012
a0001c0001t0009g0013
a0001c0001t0011g0016
a0001c0001t0011g0017
a0001c0001t0011g0138
a0001c0001t0019g0014
a0001c0001t0020g0141
a0001c0001t0024g0156
a0001c0001t0041g0009
a0001c0001t0042g0008
a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
a0003c0004t0006g0154
 23 HG01243.hp1
HG01884.hp1
HG01884.hp2
others(20): Show 
HG01243.hp1
HG01884.hp1
HG01884.hp2
HG02280.hp2
HG02572.hp1
HG02615.hp1
HG02615.hp2
HG02647.hp1
HG02717.hp1
HG02809.hp1
HG02886.hp1
HG02922.hp2
HG02965.hp1
HG02976.hp1
HG03041.hp1
HG03098.hp1
HG03130.hp1
HG03471.hp1
HG03486.hp1
HG03516.hp1
HG03579.hp1
NA18522.hp1
NA20300.hp2
 intron_variant MODIFIER c.520-2688T>C
c.520-2688T>C
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 4/21 chrX 21468078
chrX:21468282 A
A
 C
C
 3 a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
 3 HG02615.hp1
HG02965.hp1
HG03471.hp1
HG02615.hp1
HG02965.hp1
HG03471.hp1
 intron_variant MODIFIER c.520-2484A>C
c.520-2484A>C
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 4/21 chrX 21468282
chrX:21468434 AG
AG
 A
A
 1 a0001c0001t0039g0144
a0001c0001t0039g0144
 1 NA19055.hp1
NA19055.hp1
 intron_variant MODIFIER c.520-2327delG
c.520-2327delG
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 4/21 INFO_REALIGN_3_PRIME chrX 21468434
chrX:21468470 T
T
 G
G
 1 a0001c0001t0004g0020
a0001c0001t0004g0020
 1 HG01192.hp1
HG01192.hp1
 intron_variant MODIFIER c.520-2296T>G
c.520-2296T>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 4/21 chrX 21468470
chrX:21468716 T
T
 G
G
 159 a0001c0001t0001g0001
a0001c0001t0001g0035
a0001c0001t0001g0036
others(156): Show 
a0001c0001t0001g0001
a0001c0001t0001g0035
a0001c0001t0001g0036
a0001c0001t0001g0037
a0001c0001t0001g0039
a0001c0001t0001g0048
a0001c0001t0001g0052
a0001c0001t0001g0053
a0001c0001t0001g0058
a0001c0001t0001g0062
a0001c0001t0001g0067
a0001c0001t0001g0068
a0001c0001t0001g0069
a0001c0001t0001g0071
a0001c0001t0001g0073
a0001c0001t0001g0074
a0001c0001t0001g0075
a0001c0001t0001g0076
a0001c0001t0001g0077
a0001c0001t0001g0078
a0001c0001t0001g0080
a0001c0001t0001g0081
a0001c0001t0001g0082
a0001c0001t0001g0083
a0001c0001t0001g0084
a0001c0001t0001g0087
a0001c0001t0001g0089
a0001c0001t0001g0090
a0001c0001t0001g0093
a0001c0001t0001g0094
a0001c0001t0001g0096
a0001c0001t0001g0097
a0001c0001t0001g0102
a0001c0001t0001g0103
a0001c0001t0001g0109
a0001c0001t0001g0128
a0001c0001t0001g0131
a0001c0001t0001g0134
a0001c0001t0001g0137
a0001c0001t0001g0145
a0001c0001t0001g0158
a0001c0001t0002g0003
a0001c0001t0002g0004
a0001c0001t0002g0019
a0001c0001t0002g0028
a0001c0001t0002g0043
a0001c0001t0002g0046
a0001c0001t0002g0047
a0001c0001t0002g0049
a0001c0001t0002g0050
a0001c0001t0002g0110
a0001c0001t0002g0111
a0001c0001t0002g0112
a0001c0001t0002g0113
a0001c0001t0002g0114
a0001c0001t0002g0115
a0001c0001t0002g0118
a0001c0001t0002g0119
a0001c0001t0002g0120
a0001c0001t0002g0121
a0001c0001t0002g0122
a0001c0001t0002g0125
a0001c0001t0002g0126
a0001c0001t0003g0015
a0001c0001t0003g0024
a0001c0001t0003g0029
a0001c0001t0003g0031
a0001c0001t0003g0044
a0001c0001t0003g0061
a0001c0001t0003g0070
a0001c0001t0003g0101
a0001c0001t0003g0116
a0001c0001t0003g0133
a0001c0001t0003g0136
a0001c0001t0003g0151
a0001c0001t0004g0020
a0001c0001t0004g0021
a0001c0001t0004g0055
a0001c0001t0004g0056
a0001c0001t0004g0057
a0001c0001t0004g0064
a0001c0001t0004g0117
a0001c0001t0004g0129
a0001c0001t0004g0132
a0001c0001t0005g0063
a0001c0001t0005g0072
a0001c0001t0005g0079
a0001c0001t0005g0095
a0001c0001t0005g0099
a0001c0001t0006g0155
a0001c0001t0006g0157
a0001c0001t0006g0159
a0001c0001t0006g0160
a0001c0001t0006g0161
a0001c0001t0007g0022
a0001c0001t0007g0127
a0001c0001t0007g0140
a0001c0001t0008g0005
a0001c0001t0008g0124
a0001c0001t0008g0135
a0001c0001t0008g0143
a0001c0001t0009g0010
a0001c0001t0009g0011
a0001c0001t0009g0012
a0001c0001t0009g0013
a0001c0001t0010g0152
a0001c0001t0010g0153
a0001c0001t0010g0162
a0001c0001t0011g0016
a0001c0001t0011g0017
a0001c0001t0011g0138
a0001c0001t0012g0025
a0001c0001t0012g0045
a0001c0001t0012g0142
a0001c0001t0013g0066
a0001c0001t0013g0100
a0001c0001t0015g0038
a0001c0001t0015g0098
a0001c0001t0016g0032
a0001c0001t0016g0085
a0001c0001t0017g0018
a0001c0001t0017g0146
a0001c0001t0018g0123
a0001c0001t0019g0014
a0001c0001t0020g0141
a0001c0001t0021g0088
a0001c0001t0022g0033
a0001c0001t0023g0006
a0001c0001t0024g0156
a0001c0001t0025g0130
a0001c0001t0027g0034
a0001c0001t0029g0023
a0001c0001t0030g0086
a0001c0001t0031g0065
a0001c0001t0032g0163
a0001c0001t0033g0002
a0001c0001t0034g0091
a0001c0001t0035g0054
a0001c0001t0037g0092
a0001c0001t0038g0150
a0001c0001t0039g0144
a0001c0001t0040g0027
a0001c0001t0041g0009
a0001c0001t0042g0008
a0001c0001t0043g0007
a0001c0002t0001g0042
a0001c0002t0001g0104
a0001c0002t0001g0105
a0001c0002t0001g0107
a0001c0002t0001g0108
a0001c0002t0005g0106
a0001c0002t0007g0040
a0001c0002t0007g0041
a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
a0001c0007t0036g0026
a0002c0005t0003g0030
a0003c0004t0006g0154
 159 HG00140.hp1
HG00280.hp1
HG00609.hp1
others(156): Show 
HG00140.hp1
HG00280.hp1
HG00609.hp1
HG00621.hp1
HG00642.hp1
HG00673.hp1
HG00735.hp1
HG00735.hp2
HG00738.hp1
HG00741.hp1
HG00741.hp2
HG01069.hp1
HG01071.hp1
HG01071.hp2
HG01081.hp1
HG01081.hp2
HG01099.hp1
HG01106.hp1
HG01109.hp1
HG01167.hp1
HG01192.hp1
HG01243.hp1
HG01255.hp1
HG01256.hp1
HG01258.hp1
HG01261.hp1
HG01358.hp1
HG01433.hp1
HG01515.hp1
HG01884.hp1
HG01884.hp2
HG01928.hp1
HG01934.hp1
HG01943.hp1
HG01952.hp1
HG02015.hp1
HG02027.hp1
HG02040.hp1
HG02055.hp1
HG02056.hp1
HG02071.hp1
HG02074.hp1
HG02083.hp1
HG02129.hp1
HG02132.hp1
HG02135.hp1
HG02145.hp1
HG02258.hp1
HG02280.hp1
HG02280.hp2
HG02300.hp1
HG02486.hp1
HG02572.hp1
HG02602.hp1
HG02615.hp1
HG02615.hp2
HG02647.hp1
HG02698.hp1
HG02717.hp1
HG02735.hp1
HG02738.hp1
HG02809.hp1
HG02809.hp2
HG02886.hp1
HG02886.hp2
HG02895.hp1
HG02922.hp1
HG02922.hp2
HG02965.hp1
HG02976.hp1
HG02976.hp2
HG03017.hp1
HG03041.hp1
HG03098.hp1
HG03130.hp1
HG03139.hp1
HG03209.hp1
HG03225.hp1
HG03471.hp1
HG03486.hp1
HG03486.hp2
HG03490.hp1
HG03491.hp1
HG03491.hp2
HG03492.hp1
HG03516.hp1
HG03579.hp1
HG03654.hp1
HG03688.hp1
HG03710.hp1
HG03942.hp1
HG04115.hp1
HG04199.hp1
HG04204.hp1
HG04228.hp1
NA18522.hp1
NA18612.hp1
NA18747.hp1
NA18943.hp1
NA18944.hp1
NA18945.hp1
NA18948.hp1
NA18952.hp1
NA18953.hp1
NA18955.hp1
NA18959.hp1
NA18960.hp1
NA18961.hp1
NA18962.hp1
NA18965.hp1
NA18966.hp1
NA18967.hp1
NA18970.hp1
NA18971.hp1
NA18974.hp1
NA18977.hp1
NA18982.hp1
NA18983.hp1
NA18984.hp1
NA18986.hp1
NA18988.hp1
NA18989.hp1
NA18990.hp1
NA18994.hp1
NA18995.hp1
NA19000.hp1
NA19004.hp1
NA19005.hp1
NA19006.hp1
NA19007.hp1
NA19009.hp1
NA19012.hp1
NA19043.hp1
NA19055.hp1
NA19056.hp1
NA19058.hp1
NA19060.hp1
NA19062.hp1
NA19063.hp1
NA19066.hp1
NA19068.hp1
NA19070.hp1
NA19072.hp1
NA19076.hp1
NA19079.hp1
NA19082.hp1
NA19085.hp1
NA19086.hp1
NA19088.hp1
NA19089.hp1
NA19091.hp1
NA19240.hp1
NA19240.hp2
NA20300.hp1
NA20300.hp2
NA20752.hp1
NA20805.hp1
NA20905.hp1
homoSapiens_chm13v2.hp1
 intron_variant MODIFIER c.520-2050T>G
c.520-2050T>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 4/21 chrX 21468716
chrX:21468838 T
T
 C
C
 3 a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
 3 HG02615.hp1
HG02965.hp1
HG03471.hp1
HG02615.hp1
HG02965.hp1
HG03471.hp1
 intron_variant MODIFIER c.520-1928T>C
c.520-1928T>C
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 4/21 chrX 21468838
chrX:21469030 A
A
 AT
AT
 1 a0001c0001t0040g0027
a0001c0001t0040g0027
 1 NA19043.hp1
NA19043.hp1
 intron_variant MODIFIER c.520-1731dupT
c.520-1731dupT
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 4/21 INFO_REALIGN_3_PRIME chrX 21469030
chrX:21469108 ATGTTTAC
others(2): Show 
ATGTTTACTT
 A
A
 3 a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
 3 HG02615.hp1
HG02965.hp1
HG03471.hp1
HG02615.hp1
HG02965.hp1
HG03471.hp1
 intron_variant MODIFIER c.520-1647_520-1639d
others(11): Show 
c.520-1647_520-1639delGTTTACTTT
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 4/21 INFO_REALIGN_3_PRIME chrX 21469108
chrX:21469159 AT
AT
 A
A
 1 a0001c0001t0039g0144
a0001c0001t0039g0144
 1 NA19055.hp1
NA19055.hp1
 intron_variant MODIFIER c.520-1602delT
c.520-1602delT
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 4/21 INFO_REALIGN_3_PRIME chrX 21469159
chrX:21469295 G
G
 A
A
 2 a0001c0001t0001g0068
a0001c0001t0033g0002
a0001c0001t0001g0068
a0001c0001t0033g0002
 2 NA18989.hp1
NA19006.hp1
NA18989.hp1
NA19006.hp1
 intron_variant MODIFIER c.520-1471G>A
c.520-1471G>A
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 4/21 chrX 21469295
chrX:21469479 A
A
 G
G
 2 a0001c0001t0001g0060
a0001c0006t0028g0059
a0001c0001t0001g0060
a0001c0006t0028g0059
 2 HG03041.hp2
HG03516.hp2
HG03041.hp2
HG03516.hp2
 intron_variant MODIFIER c.520-1287A>G
c.520-1287A>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 4/21 chrX 21469479
chrX:21469546 TG
TG
 T
T
 1 a0001c0001t0003g0151
a0001c0001t0003g0151
 1 HG01081.hp2
HG01081.hp2
 intron_variant MODIFIER c.520-1219delG
c.520-1219delG
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 4/21 chrX 21469546
chrX:21469547 G
G
 GT
GT
 3 a0001c0001t0006g0155
a0001c0001t0006g0160
a0003c0004t0006g0154
a0001c0001t0006g0155
a0001c0001t0006g0160
a0003c0004t0006g0154
 3 HG01884.hp1
HG02615.hp2
HG02922.hp2
HG01884.hp1
HG02615.hp2
HG02922.hp2
 intron_variant MODIFIER c.520-1209dupT
c.520-1209dupT
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 4/21 INFO_REALIGN_3_PRIME chrX 21469547
chrX:21469577 AT
AT
 A
A
 1 a0001c0001t0039g0144
a0001c0001t0039g0144
 1 NA19055.hp1
NA19055.hp1
 intron_variant MODIFIER c.520-1187delT
c.520-1187delT
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 4/21 INFO_REALIGN_3_PRIME chrX 21469577
chrX:21469626 A
A
 G
G
 3 a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
 3 HG02615.hp1
HG02965.hp1
HG03471.hp1
HG02615.hp1
HG02965.hp1
HG03471.hp1
 intron_variant MODIFIER c.520-1140A>G
c.520-1140A>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 4/21 chrX 21469626
chrX:21469637 G
G
 A
A
 1 a0001c0001t0003g0044
a0001c0001t0003g0044
 1 HG03942.hp1
HG03942.hp1
 intron_variant MODIFIER c.520-1129G>A
c.520-1129G>A
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 4/21 chrX 21469637
chrX:21469837 AG
AG
 A
A
 1 a0001c0001t0039g0144
a0001c0001t0039g0144
 1 NA19055.hp1
NA19055.hp1
 intron_variant MODIFIER c.520-924delG
c.520-924delG
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 4/21 INFO_REALIGN_3_PRIME chrX 21469837
chrX:21470165 AG
AG
 A
A
 1 a0001c0001t0039g0144
a0001c0001t0039g0144
 1 NA19055.hp1
NA19055.hp1
 intron_variant MODIFIER c.520-600delG
c.520-600delG
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 4/21 chrX 21470165
chrX:21470353 ATGTT
ATGTT
 A
A
 1 a0001c0001t0002g0019
a0001c0001t0002g0019
 1 HG01106.hp1
HG01106.hp1
 intron_variant MODIFIER c.520-412_520-409del
others(4): Show 
c.520-412_520-409delTGTT
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 4/21 chrX 21470353
chrX:21470583 T
T
 A
A
 1 a0001c0001t0003g0151
a0001c0001t0003g0151
 1 HG01081.hp2
HG01081.hp2
 intron_variant MODIFIER c.520-183T>A
c.520-183T>A
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 4/21 chrX 21470583
chrX:21471039 G
G
 A
A
 3 a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
 3 HG02615.hp1
HG02965.hp1
HG03471.hp1
HG02615.hp1
HG02965.hp1
HG03471.hp1
 intron_variant MODIFIER c.561+232G>A
c.561+232G>A
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 5/21 chrX 21471039
chrX:21471062 T
T
 C
C
 4 a0001c0001t0003g0015
a0001c0001t0011g0016
a0001c0001t0011g0017
others(1): Show 
a0001c0001t0003g0015
a0001c0001t0011g0016
a0001c0001t0011g0017
a0001c0001t0011g0138
 4 HG02717.hp1
HG03041.hp1
HG03579.hp1
others(1): Show 
HG02717.hp1
HG03041.hp1
HG03579.hp1
NA18522.hp1
 intron_variant MODIFIER c.561+255T>C
c.561+255T>C
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 5/21 chrX 21471062
chrX:21471247 T
T
 C
C
 1 a0001c0001t0012g0142
a0001c0001t0012g0142
 1 HG03139.hp1
HG03139.hp1
 intron_variant MODIFIER c.561+440T>C
c.561+440T>C
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 5/21 chrX 21471247
chrX:21471318 G
G
 A
A
 6 a0001c0001t0002g0028
a0001c0001t0003g0024
a0001c0001t0012g0025
others(3): Show 
a0001c0001t0002g0028
a0001c0001t0003g0024
a0001c0001t0012g0025
a0001c0001t0038g0150
a0001c0001t0040g0027
a0001c0007t0036g0026
 6 HG01081.hp1
HG02258.hp1
HG02280.hp1
others(3): Show 
HG01081.hp1
HG02258.hp1
HG02280.hp1
HG03486.hp2
NA19043.hp1
NA19240.hp1
 intron_variant MODIFIER c.561+511G>A
c.561+511G>A
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 5/21 chrX 21471318
chrX:21471341 C
C
 T
T
 2 a0001c0001t0002g0112
a0001c0001t0002g0113
a0001c0001t0002g0112
a0001c0001t0002g0113
 2 HG00735.hp1
HG01433.hp1
HG00735.hp1
HG01433.hp1
 intron_variant MODIFIER c.561+534C>T
c.561+534C>T
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 5/21 chrX 21471341
chrX:21471451 A
A
 G
G
 1 a0001c0001t0042g0008
a0001c0001t0042g0008
 1 HG02647.hp1
HG02647.hp1
 intron_variant MODIFIER c.561+644A>G
c.561+644A>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 5/21 chrX 21471451
chrX:21471631 G
G
 A
A
 1 a0001c0001t0001g0076
a0001c0001t0001g0076
 1 NA18982.hp1
NA18982.hp1
 intron_variant MODIFIER c.561+824G>A
c.561+824G>A
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 5/21 chrX 21471631
chrX:21471727 C
C
 T
T
 1 a0001c0001t0001g0080
a0001c0001t0001g0080
 1 HG01255.hp1
HG01255.hp1
 intron_variant MODIFIER c.561+920C>T
c.561+920C>T
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 5/21 chrX 21471727
chrX:21471847 C
C
 T
T
 1 a0001c0001t0003g0031
a0001c0001t0003g0031
 1 HG02976.hp2
HG02976.hp2
 intron_variant MODIFIER c.561+1040C>T
c.561+1040C>T
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 5/21 chrX 21471847
chrX:21471934 A
A
 G
G
 1 a0001c0001t0012g0045
a0001c0001t0012g0045
 1 HG02145.hp1
HG02145.hp1
 intron_variant MODIFIER c.561+1127A>G
c.561+1127A>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 5/21 chrX 21471934
chrX:21472021 C
C
 T
T
 1 a0001c0001t0038g0150
a0001c0001t0038g0150
 1 NA19240.hp1
NA19240.hp1
 intron_variant MODIFIER c.561+1214C>T
c.561+1214C>T
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 5/21 chrX 21472021
chrX:21472129 G
G
 A
A
 1 a0001c0001t0020g0141
a0001c0001t0020g0141
 1 HG01243.hp1
HG01243.hp1
 intron_variant MODIFIER c.561+1322G>A
c.561+1322G>A
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 5/21 chrX 21472129
chrX:21472382 T
T
 C
C
 3 a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
 3 HG02615.hp1
HG02965.hp1
HG03471.hp1
HG02615.hp1
HG02965.hp1
HG03471.hp1
 intron_variant MODIFIER c.561+1575T>C
c.561+1575T>C
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 5/21 chrX 21472382
chrX:21472441 C
C
 T
T
 3 a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
 3 HG02615.hp1
HG02965.hp1
HG03471.hp1
HG02615.hp1
HG02965.hp1
HG03471.hp1
 intron_variant MODIFIER c.561+1634C>T
c.561+1634C>T
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 5/21 chrX 21472441
chrX:21472989 T
T
 G
G
 1 a0001c0001t0003g0151
a0001c0001t0003g0151
 1 HG01081.hp2
HG01081.hp2
 intron_variant MODIFIER c.561+2182T>G
c.561+2182T>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 5/21 chrX 21472989
chrX:21473745 G
G
 GT
GT
 12 a0001c0001t0001g0077
a0001c0001t0001g0078
a0001c0001t0001g0082
others(9): Show 
a0001c0001t0001g0077
a0001c0001t0001g0078
a0001c0001t0001g0082
a0001c0001t0001g0087
a0001c0001t0001g0090
a0001c0001t0001g0145
a0001c0001t0002g0110
a0001c0001t0002g0118
a0001c0001t0004g0020
a0001c0001t0011g0017
a0001c0001t0039g0144
a0001c0002t0001g0105
 12 HG00735.hp2
HG01192.hp1
HG01928.hp1
others(9): Show 
HG00735.hp2
HG01192.hp1
HG01928.hp1
HG01943.hp1
HG02074.hp1
HG03579.hp1
NA19005.hp1
NA19009.hp1
NA19055.hp1
NA19082.hp1
NA19086.hp1
NA20905.hp1
 intron_variant MODIFIER c.561+2957dupT
c.561+2957dupT
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 5/21 INFO_REALIGN_3_PRIME chrX 21473745
chrX:21473745 G
G
 GTTTTTTT
GTTTTTTT
 4 a0001c0001t0042g0008
a0001c0003t0014g0147
a0001c0003t0014g0149
others(1): Show 
a0001c0001t0042g0008
a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
 4 HG02615.hp1
HG02647.hp1
HG02965.hp1
others(1): Show 
HG02615.hp1
HG02647.hp1
HG02965.hp1
HG03471.hp1
 intron_variant MODIFIER c.561+2951_561+2957d
others(9): Show 
c.561+2951_561+2957dupTTTTTTT
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 5/21 INFO_REALIGN_3_PRIME chrX 21473745
chrX:21473745 G
G
 GTTTTTTT
others(7): Show 
GTTTTTTTTTTTTTT
 1 a0001c0001t0003g0151
a0001c0001t0003g0151
 1 HG01081.hp2
HG01081.hp2
 intron_variant MODIFIER c.561+2944_561+2957d
others(16): Show 
c.561+2944_561+2957dupTTTTTTTTTTTTTT
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 5/21 INFO_REALIGN_3_PRIME chrX 21473745
chrX:21473745 G
G
 GTTTTTTT
others(12): Show 
GTTTTTTTTTTTTTTTTTTT
 4 a0001c0001t0003g0029
a0001c0001t0043g0007
a0001c0007t0036g0026
others(1): Show 
a0001c0001t0003g0029
a0001c0001t0043g0007
a0001c0007t0036g0026
a0003c0004t0006g0154
 4 HG01081.hp1
HG01884.hp1
HG02895.hp1
others(1): Show 
HG01081.hp1
HG01884.hp1
HG02895.hp1
HG03491.hp2
 intron_variant MODIFIER c.561+2939_561+2957d
others(21): Show 
c.561+2939_561+2957dupTTTTTTTTTTTTTTTTTTT
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 5/21 INFO_REALIGN_3_PRIME chrX 21473745
chrX:21473745 G
G
 GTTTTTTT
others(13): Show 
GTTTTTTTTTTTTTTTTTTTT
 7 a0001c0001t0002g0028
a0001c0001t0003g0024
a0001c0001t0010g0152
others(4): Show 
a0001c0001t0002g0028
a0001c0001t0003g0024
a0001c0001t0010g0152
a0001c0001t0012g0025
a0001c0001t0017g0146
a0001c0001t0024g0156
a0001c0001t0038g0150
 7 HG01109.hp1
HG02258.hp1
HG02280.hp1
others(4): Show 
HG01109.hp1
HG02258.hp1
HG02280.hp1
HG03225.hp1
HG03486.hp2
NA19240.hp1
NA20300.hp2
 intron_variant MODIFIER c.561+2957_561+2958i
others(22): Show 
c.561+2957_561+2958insTTTTTTTTTTTTTTTTTTTT
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 5/21 INFO_REALIGN_3_PRIME chrX 21473745
chrX:21473745 G
G
 GTTTTTTT
others(14): Show 
GTTTTTTTTTTTTTTTTTTTTT
 4 a0001c0001t0006g0160
a0001c0001t0006g0161
a0001c0001t0010g0162
others(1): Show 
a0001c0001t0006g0160
a0001c0001t0006g0161
a0001c0001t0010g0162
a0001c0001t0040g0027
 4 HG02615.hp2
HG02976.hp1
HG03209.hp1
others(1): Show 
HG02615.hp2
HG02976.hp1
HG03209.hp1
NA19043.hp1
 intron_variant MODIFIER c.561+2957_561+2958i
others(23): Show 
c.561+2957_561+2958insTTTTTTTTTTTTTTTTTTTTT
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 5/21 INFO_REALIGN_3_PRIME chrX 21473745
chrX:21473745 G
G
 GTTTTTTT
others(15): Show 
GTTTTTTTTTTTTTTTTTTTTTT
 1 a0001c0001t0010g0153
a0001c0001t0010g0153
 1 NA19240.hp2
NA19240.hp2
 intron_variant MODIFIER c.561+2957_561+2958i
others(24): Show 
c.561+2957_561+2958insTTTTTTTTTTTTTTTTTTTTTT
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 5/21 INFO_REALIGN_3_PRIME chrX 21473745
chrX:21473745 G
G
 GTTTTTTT
others(16): Show 
GTTTTTTTTTTTTTTTTTTTTTTT
 5 a0001c0001t0007g0140
a0001c0001t0009g0011
a0001c0001t0017g0018
others(2): Show 
a0001c0001t0007g0140
a0001c0001t0009g0011
a0001c0001t0017g0018
a0001c0001t0019g0014
a0001c0001t0020g0141
 5 HG01071.hp2
HG01243.hp1
HG01884.hp2
others(2): Show 
HG01071.hp2
HG01243.hp1
HG01884.hp2
HG02809.hp1
HG02922.hp1
 intron_variant MODIFIER c.561+2957_561+2958i
others(25): Show 
c.561+2957_561+2958insTTTTTTTTTTTTTTTTTTTTTTT
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 5/21 INFO_REALIGN_3_PRIME chrX 21473745
chrX:21473745 G
G
 GTTTTTTT
others(17): Show 
GTTTTTTTTTTTTTTTTTTTTTTTT
 2 a0001c0001t0009g0010
a0001c0001t0009g0012
a0001c0001t0009g0010
a0001c0001t0009g0012
 2 HG02280.hp2
HG02572.hp1
HG02280.hp2
HG02572.hp1
 intron_variant MODIFIER c.561+2957_561+2958i
others(26): Show 
c.561+2957_561+2958insTTTTTTTTTTTTTTTTTTTTTTTT
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 5/21 INFO_REALIGN_3_PRIME chrX 21473745
chrX:21473745 G
G
 GTTTTTTT
others(19): Show 
GTTTTTTTTTTTTTTTTTTTTTTTTTT
 2 a0001c0001t0006g0155
a0001c0001t0006g0157
a0001c0001t0006g0155
a0001c0001t0006g0157
 2 HG02922.hp2
HG03130.hp1
HG02922.hp2
HG03130.hp1
 intron_variant MODIFIER c.561+2957_561+2958i
others(28): Show 
c.561+2957_561+2958insTTTTTTTTTTTTTTTTTTTTTTTTTT
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 5/21 INFO_REALIGN_3_PRIME chrX 21473745
chrX:21473745 G
G
 GTTTTTTT
others(20): Show 
GTTTTTTTTTTTTTTTTTTTTTTTTTTT
 3 a0001c0001t0006g0159
a0001c0001t0009g0013
a0001c0001t0041g0009
a0001c0001t0006g0159
a0001c0001t0009g0013
a0001c0001t0041g0009
 3 HG02886.hp1
HG03098.hp1
HG03486.hp1
HG02886.hp1
HG03098.hp1
HG03486.hp1
 intron_variant MODIFIER c.561+2957_561+2958i
others(29): Show 
c.561+2957_561+2958insTTTTTTTTTTTTTTTTTTTTTTTTTTT
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 5/21 INFO_REALIGN_3_PRIME chrX 21473745
chrX:21473745 GT
GT
 G
G
 6 a0001c0001t0002g0004
a0001c0001t0002g0019
a0001c0001t0004g0021
others(3): Show 
a0001c0001t0002g0004
a0001c0001t0002g0019
a0001c0001t0004g0021
a0001c0001t0008g0005
a0001c0001t0012g0045
a0002c0005t0003g0030
 6 HG01069.hp1
HG01071.hp1
HG01106.hp1
others(3): Show 
HG01069.hp1
HG01071.hp1
HG01106.hp1
HG01256.hp1
HG02145.hp1
HG02886.hp2
 intron_variant MODIFIER c.561+2957delT
c.561+2957delT
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 5/21 INFO_REALIGN_3_PRIME chrX 21473745
chrX:21473745 GTT
GTT
 G
G
 1 a0001c0001t0003g0031
a0001c0001t0003g0031
 1 HG02976.hp2
HG02976.hp2
 intron_variant MODIFIER c.561+2956_561+2957d
others(4): Show 
c.561+2956_561+2957delTT
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 5/21 INFO_REALIGN_3_PRIME chrX 21473745
chrX:21473745 GTTTT
GTTTT
 G
G
 1 a0001c0001t0001g0158
a0001c0001t0001g0158
 1 HG03516.hp1
HG03516.hp1
 intron_variant MODIFIER c.561+2954_561+2957d
others(6): Show 
c.561+2954_561+2957delTTTT
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 5/21 INFO_REALIGN_3_PRIME chrX 21473745
chrX:21473745 GTTTTTT
GTTTTTT
 G
G
 2 a0001c0001t0022g0033
a0001c0001t0027g0034
a0001c0001t0022g0033
a0001c0001t0027g0034
 2 HG02055.hp1
HG02486.hp1
HG02055.hp1
HG02486.hp1
 intron_variant MODIFIER c.561+2952_561+2957d
others(8): Show 
c.561+2952_561+2957delTTTTTT
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 5/21 INFO_REALIGN_3_PRIME chrX 21473745
chrX:21473872 G
G
 A
A
 1 a0001c0001t0017g0018
a0001c0001t0017g0018
 1 HG01071.hp2
HG01071.hp2
 intron_variant MODIFIER c.561+3065G>A
c.561+3065G>A
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 5/21 chrX 21473872
chrX:21474526 A
A
 G
G
 2 a0001c0001t0023g0006
a0001c0001t0043g0007
a0001c0001t0023g0006
a0001c0001t0043g0007
 2 HG03491.hp2
HG03654.hp1
HG03491.hp2
HG03654.hp1
 intron_variant MODIFIER c.561+3719A>G
c.561+3719A>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 5/21 chrX 21474526
chrX:21474860 GTATT
GTATT
 G
G
 1 a0001c0001t0001g0080
a0001c0001t0001g0080
 1 HG01255.hp1
HG01255.hp1
 intron_variant MODIFIER c.561+4057_561+4060d
others(6): Show 
c.561+4057_561+4060delTTAT
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 5/21 INFO_REALIGN_3_PRIME chrX 21474860
chrX:21475180 C
C
 T
T
 1 a0001c0001t0013g0100
a0001c0001t0013g0100
 1 NA18955.hp1
NA18955.hp1
 intron_variant MODIFIER c.561+4373C>T
c.561+4373C>T
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 5/21 chrX 21475180
chrX:21475319 A
A
 G
G
 20 a0001c0001t0001g0158
a0001c0001t0002g0028
a0001c0001t0003g0024
others(17): Show 
a0001c0001t0001g0158
a0001c0001t0002g0028
a0001c0001t0003g0024
a0001c0001t0003g0029
a0001c0001t0006g0155
a0001c0001t0006g0157
a0001c0001t0006g0159
a0001c0001t0006g0160
a0001c0001t0006g0161
a0001c0001t0010g0152
a0001c0001t0010g0153
a0001c0001t0010g0162
a0001c0001t0012g0025
a0001c0001t0017g0018
a0001c0001t0017g0146
a0001c0001t0024g0156
a0001c0001t0038g0150
a0001c0001t0040g0027
a0001c0007t0036g0026
a0003c0004t0006g0154
 20 HG01071.hp2
HG01081.hp1
HG01109.hp1
others(17): Show 
HG01071.hp2
HG01081.hp1
HG01109.hp1
HG01884.hp1
HG02258.hp1
HG02280.hp1
HG02615.hp2
HG02886.hp1
HG02895.hp1
HG02922.hp2
HG02976.hp1
HG03130.hp1
HG03209.hp1
HG03225.hp1
HG03486.hp2
HG03516.hp1
NA19043.hp1
NA19240.hp1
NA19240.hp2
NA20300.hp2
 intron_variant MODIFIER c.561+4512A>G
c.561+4512A>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 5/21 chrX 21475319
chrX:21475621 T
T
 C
C
 33 a0001c0001t0001g0158
a0001c0001t0002g0028
a0001c0001t0003g0015
others(30): Show 
a0001c0001t0001g0158
a0001c0001t0002g0028
a0001c0001t0003g0015
a0001c0001t0003g0024
a0001c0001t0003g0029
a0001c0001t0006g0155
a0001c0001t0006g0157
a0001c0001t0006g0159
a0001c0001t0006g0160
a0001c0001t0006g0161
a0001c0001t0009g0010
a0001c0001t0009g0011
a0001c0001t0009g0012
a0001c0001t0009g0013
a0001c0001t0010g0152
a0001c0001t0010g0153
a0001c0001t0010g0162
a0001c0001t0011g0016
a0001c0001t0011g0017
a0001c0001t0011g0138
a0001c0001t0012g0025
a0001c0001t0017g0018
a0001c0001t0017g0146
a0001c0001t0019g0014
a0001c0001t0020g0141
a0001c0001t0024g0156
a0001c0001t0038g0150
a0001c0001t0040g0027
a0001c0001t0041g0009
a0001c0001t0042g0008
a0001c0001t0043g0007
a0001c0007t0036g0026
a0003c0004t0006g0154
 33 HG01071.hp2
HG01081.hp1
HG01109.hp1
others(30): Show 
HG01071.hp2
HG01081.hp1
HG01109.hp1
HG01243.hp1
HG01884.hp1
HG01884.hp2
HG02258.hp1
HG02280.hp1
HG02280.hp2
HG02572.hp1
HG02615.hp2
HG02647.hp1
HG02717.hp1
HG02809.hp1
HG02886.hp1
HG02895.hp1
HG02922.hp2
HG02976.hp1
HG03041.hp1
HG03098.hp1
HG03130.hp1
HG03209.hp1
HG03225.hp1
HG03486.hp1
HG03486.hp2
HG03491.hp2
HG03516.hp1
HG03579.hp1
NA18522.hp1
NA19043.hp1
NA19240.hp1
NA19240.hp2
NA20300.hp2
 intron_variant MODIFIER c.561+4814T>C
c.561+4814T>C
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 5/21 chrX 21475621
chrX:21475837 A
A
 AT
AT
 1 a0001c0001t0039g0144
a0001c0001t0039g0144
 1 NA19055.hp1
NA19055.hp1
 intron_variant MODIFIER c.561+5037dupT
c.561+5037dupT
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 5/21 INFO_REALIGN_3_PRIME chrX 21475837
chrX:21475967 T
T
 C
C
 3 a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
 3 HG02615.hp1
HG02965.hp1
HG03471.hp1
HG02615.hp1
HG02965.hp1
HG03471.hp1
 intron_variant MODIFIER c.561+5160T>C
c.561+5160T>C
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 5/21 chrX 21475967
chrX:21475993 G
G
 A
A
 1 a0002c0005t0003g0030
a0002c0005t0003g0030
 1 HG02886.hp2
HG02886.hp2
 intron_variant MODIFIER c.561+5186G>A
c.561+5186G>A
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 5/21 chrX 21475993
chrX:21476114 G
G
 T
T
 40 a0001c0001t0001g0158
a0001c0001t0002g0028
a0001c0001t0003g0015
others(37): Show 
a0001c0001t0001g0158
a0001c0001t0002g0028
a0001c0001t0003g0015
a0001c0001t0003g0024
a0001c0001t0003g0029
a0001c0001t0003g0151
a0001c0001t0006g0155
a0001c0001t0006g0157
a0001c0001t0006g0159
a0001c0001t0006g0160
a0001c0001t0006g0161
a0001c0001t0007g0140
a0001c0001t0009g0010
a0001c0001t0009g0011
a0001c0001t0009g0012
a0001c0001t0009g0013
a0001c0001t0010g0152
a0001c0001t0010g0153
a0001c0001t0010g0162
a0001c0001t0011g0016
a0001c0001t0011g0017
a0001c0001t0011g0138
a0001c0001t0012g0025
a0001c0001t0017g0018
a0001c0001t0017g0146
a0001c0001t0019g0014
a0001c0001t0020g0141
a0001c0001t0022g0033
a0001c0001t0024g0156
a0001c0001t0027g0034
a0001c0001t0038g0150
a0001c0001t0040g0027
a0001c0001t0041g0009
a0001c0001t0042g0008
a0001c0001t0043g0007
a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
a0001c0007t0036g0026
a0003c0004t0006g0154
 40 HG01071.hp2
HG01081.hp1
HG01081.hp2
others(37): Show 
HG01071.hp2
HG01081.hp1
HG01081.hp2
HG01109.hp1
HG01243.hp1
HG01884.hp1
HG01884.hp2
HG02055.hp1
HG02258.hp1
HG02280.hp1
HG02280.hp2
HG02486.hp1
HG02572.hp1
HG02615.hp1
HG02615.hp2
HG02647.hp1
HG02717.hp1
HG02809.hp1
HG02886.hp1
HG02895.hp1
HG02922.hp1
HG02922.hp2
HG02965.hp1
HG02976.hp1
HG03041.hp1
HG03098.hp1
HG03130.hp1
HG03209.hp1
HG03225.hp1
HG03471.hp1
HG03486.hp1
HG03486.hp2
HG03491.hp2
HG03516.hp1
HG03579.hp1
NA18522.hp1
NA19043.hp1
NA19240.hp1
NA19240.hp2
NA20300.hp2
 intron_variant MODIFIER c.561+5307G>T
c.561+5307G>T
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 5/21 chrX 21476114
chrX:21476272 A
A
 G
G
 1 a0001c0001t0004g0064
a0001c0001t0004g0064
 1 HG00738.hp1
HG00738.hp1
 intron_variant MODIFIER c.561+5465A>G
c.561+5465A>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 5/21 chrX 21476272
chrX:21476295 T
T
 C
C
 13 a0001c0001t0003g0015
a0001c0001t0009g0010
a0001c0001t0009g0011
others(10): Show 
a0001c0001t0003g0015
a0001c0001t0009g0010
a0001c0001t0009g0011
a0001c0001t0009g0012
a0001c0001t0009g0013
a0001c0001t0011g0016
a0001c0001t0011g0017
a0001c0001t0011g0138
a0001c0001t0017g0018
a0001c0001t0019g0014
a0001c0001t0020g0141
a0001c0001t0041g0009
a0001c0001t0042g0008
 13 HG01071.hp2
HG01243.hp1
HG01884.hp2
others(10): Show 
HG01071.hp2
HG01243.hp1
HG01884.hp2
HG02280.hp2
HG02572.hp1
HG02647.hp1
HG02717.hp1
HG02809.hp1
HG03041.hp1
HG03098.hp1
HG03486.hp1
HG03579.hp1
NA18522.hp1
 intron_variant MODIFIER c.561+5488T>C
c.561+5488T>C
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 5/21 chrX 21476295
chrX:21476493 C
C
 T
T
 1 a0001c0001t0003g0031
a0001c0001t0003g0031
 1 HG02976.hp2
HG02976.hp2
 intron_variant MODIFIER c.561+5686C>T
c.561+5686C>T
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 5/21 chrX 21476493
chrX:21477067 C
C
 T
T
 1 a0001c0001t0001g0051
a0001c0001t0001g0051
 1 HG01074.hp1
HG01074.hp1
 intron_variant MODIFIER c.561+6260C>T
c.561+6260C>T
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 5/21 chrX 21477067
chrX:21477151 C
C
 A
A
 1 a0001c0001t0001g0096
a0001c0001t0001g0096
 1 HG03710.hp1
HG03710.hp1
 intron_variant MODIFIER c.561+6344C>A
c.561+6344C>A
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 5/21 chrX 21477151
chrX:21477756 AGGATGTG
others(6): Show 
AGGATGTGTTTAAG
 A
A
 1 a0001c0001t0007g0140
a0001c0001t0007g0140
 1 HG02922.hp1
HG02922.hp1
 intron_variant MODIFIER c.561+6950_561+6962d
others(15): Show 
c.561+6950_561+6962delGGATGTGTTTAAG
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 5/21 chrX 21477756
chrX:21477855 A
A
 G
G
 1 a0001c0001t0002g0114
a0001c0001t0002g0114
 1 HG00140.hp1
HG00140.hp1
 intron_variant MODIFIER c.561+7048A>G
c.561+7048A>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 5/21 chrX 21477855
chrX:21478624 G
G
 A
A
 3 a0001c0001t0002g0004
a0001c0001t0003g0031
a0001c0001t0008g0005
a0001c0001t0002g0004
a0001c0001t0003g0031
a0001c0001t0008g0005
 3 HG01069.hp1
HG01071.hp1
HG02976.hp2
HG01069.hp1
HG01071.hp1
HG02976.hp2
 intron_variant MODIFIER c.561+7817G>A
c.561+7817G>A
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 5/21 chrX 21478624
chrX:21478851 C
C
 T
T
 40 a0001c0001t0001g0158
a0001c0001t0002g0028
a0001c0001t0003g0015
others(37): Show 
a0001c0001t0001g0158
a0001c0001t0002g0028
a0001c0001t0003g0015
a0001c0001t0003g0024
a0001c0001t0003g0029
a0001c0001t0003g0151
a0001c0001t0006g0155
a0001c0001t0006g0157
a0001c0001t0006g0159
a0001c0001t0006g0160
a0001c0001t0006g0161
a0001c0001t0007g0140
a0001c0001t0009g0010
a0001c0001t0009g0011
a0001c0001t0009g0012
a0001c0001t0009g0013
a0001c0001t0010g0152
a0001c0001t0010g0153
a0001c0001t0010g0162
a0001c0001t0011g0016
a0001c0001t0011g0017
a0001c0001t0011g0138
a0001c0001t0012g0025
a0001c0001t0017g0018
a0001c0001t0017g0146
a0001c0001t0019g0014
a0001c0001t0020g0141
a0001c0001t0022g0033
a0001c0001t0024g0156
a0001c0001t0027g0034
a0001c0001t0038g0150
a0001c0001t0040g0027
a0001c0001t0041g0009
a0001c0001t0042g0008
a0001c0001t0043g0007
a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
a0001c0007t0036g0026
a0003c0004t0006g0154
 40 HG01071.hp2
HG01081.hp1
HG01081.hp2
others(37): Show 
HG01071.hp2
HG01081.hp1
HG01081.hp2
HG01109.hp1
HG01243.hp1
HG01884.hp1
HG01884.hp2
HG02055.hp1
HG02258.hp1
HG02280.hp1
HG02280.hp2
HG02486.hp1
HG02572.hp1
HG02615.hp1
HG02615.hp2
HG02647.hp1
HG02717.hp1
HG02809.hp1
HG02886.hp1
HG02895.hp1
HG02922.hp1
HG02922.hp2
HG02965.hp1
HG02976.hp1
HG03041.hp1
HG03098.hp1
HG03130.hp1
HG03209.hp1
HG03225.hp1
HG03471.hp1
HG03486.hp1
HG03486.hp2
HG03491.hp2
HG03516.hp1
HG03579.hp1
NA18522.hp1
NA19043.hp1
NA19240.hp1
NA19240.hp2
NA20300.hp2
 intron_variant MODIFIER c.561+8044C>T
c.561+8044C>T
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 5/21 chrX 21478851
chrX:21478864 A
A
 G
G
 5 a0001c0001t0022g0033
a0001c0001t0027g0034
a0001c0003t0014g0147
others(2): Show 
a0001c0001t0022g0033
a0001c0001t0027g0034
a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
 5 HG02055.hp1
HG02486.hp1
HG02615.hp1
others(2): Show 
HG02055.hp1
HG02486.hp1
HG02615.hp1
HG02965.hp1
HG03471.hp1
 intron_variant MODIFIER c.561+8057A>G
c.561+8057A>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 5/21 chrX 21478864
chrX:21478909 T
T
 C
C
 3 a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
 3 HG02615.hp1
HG02965.hp1
HG03471.hp1
HG02615.hp1
HG02965.hp1
HG03471.hp1
 intron_variant MODIFIER c.561+8102T>C
c.561+8102T>C
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 5/21 chrX 21478909
chrX:21479101 A
A
 G
G
 1 a0001c0001t0007g0140
a0001c0001t0007g0140
 1 HG02922.hp1
HG02922.hp1
 intron_variant MODIFIER c.561+8294A>G
c.561+8294A>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 5/21 chrX 21479101
chrX:21479172 C
C
 T
T
 2 a0001c0001t0001g0077
a0001c0001t0029g0023
a0001c0001t0001g0077
a0001c0001t0029g0023
 2 HG00735.hp2
HG01099.hp1
HG00735.hp2
HG01099.hp1
 intron_variant MODIFIER c.561+8365C>T
c.561+8365C>T
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 5/21 chrX 21479172
chrX:21479459 TA
TA
 T
T
 1 a0001c0001t0012g0142
a0001c0001t0012g0142
 1 HG03139.hp1
HG03139.hp1
 intron_variant MODIFIER c.561+8653delA
c.561+8653delA
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 5/21 chrX 21479459
chrX:21479772 A
A
 G
G
 4 a0001c0001t0003g0015
a0001c0001t0011g0016
a0001c0001t0011g0017
others(1): Show 
a0001c0001t0003g0015
a0001c0001t0011g0016
a0001c0001t0011g0017
a0001c0001t0011g0138
 4 HG02717.hp1
HG03041.hp1
HG03579.hp1
others(1): Show 
HG02717.hp1
HG03041.hp1
HG03579.hp1
NA18522.hp1
 intron_variant MODIFIER c.561+8965A>G
c.561+8965A>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 5/21 chrX 21479772
chrX:21480145 C
C
 T
T
 3 a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
 3 HG02615.hp1
HG02965.hp1
HG03471.hp1
HG02615.hp1
HG02965.hp1
HG03471.hp1
 intron_variant MODIFIER c.561+9338C>T
c.561+9338C>T
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 5/21 chrX 21480145
chrX:21480185 C
C
 T
T
 1 a0001c0001t0035g0054
a0001c0001t0035g0054
 1 NA18967.hp1
NA18967.hp1
 intron_variant MODIFIER c.561+9378C>T
c.561+9378C>T
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 5/21 chrX 21480185
chrX:21480276 C
C
 T
T
 23 a0001c0001t0001g0001
a0001c0001t0002g0003
a0001c0001t0002g0046
others(20): Show 
a0001c0001t0001g0001
a0001c0001t0002g0003
a0001c0001t0002g0046
a0001c0001t0002g0047
a0001c0001t0002g0049
a0001c0001t0002g0050
a0001c0001t0002g0110
a0001c0001t0002g0111
a0001c0001t0002g0112
a0001c0001t0002g0113
a0001c0001t0002g0114
a0001c0001t0002g0118
a0001c0001t0002g0119
a0001c0001t0002g0120
a0001c0001t0002g0121
a0001c0001t0002g0122
a0001c0001t0002g0125
a0001c0001t0002g0126
a0001c0001t0008g0124
a0001c0001t0008g0135
a0001c0001t0008g0143
a0001c0001t0012g0142
a0001c0001t0039g0144
 23 HG00140.hp1
HG00621.hp1
HG00735.hp1
others(20): Show 
HG00140.hp1
HG00621.hp1
HG00735.hp1
HG00741.hp2
HG01433.hp1
HG02074.hp1
HG02083.hp1
HG03139.hp1
NA18612.hp1
NA18943.hp1
NA18944.hp1
NA18966.hp1
NA18986.hp1
NA18990.hp1
NA19000.hp1
NA19004.hp1
NA19012.hp1
NA19055.hp1
NA19068.hp1
NA19070.hp1
NA19076.hp1
NA19086.hp1
NA19091.hp1
 intron_variant MODIFIER c.561+9469C>T
c.561+9469C>T
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 5/21 chrX 21480276
chrX:21480310 T
T
 G
G
 1 a0001c0001t0003g0151
a0001c0001t0003g0151
 1 HG01081.hp2
HG01081.hp2
 intron_variant MODIFIER c.561+9503T>G
c.561+9503T>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 5/21 chrX 21480310
chrX:21480427 A
A
 G
G
 1 a0001c0001t0005g0072
a0001c0001t0005g0072
 1 NA19058.hp1
NA19058.hp1
 intron_variant MODIFIER c.561+9620A>G
c.561+9620A>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 5/21 chrX 21480427
chrX:21480547 C
C
 T
T
 16 a0001c0001t0001g0037
a0001c0001t0001g0048
a0001c0001t0001g0067
others(13): Show 
a0001c0001t0001g0037
a0001c0001t0001g0048
a0001c0001t0001g0067
a0001c0001t0001g0068
a0001c0001t0001g0069
a0001c0001t0001g0071
a0001c0001t0001g0134
a0001c0001t0003g0061
a0001c0001t0003g0133
a0001c0001t0003g0136
a0001c0001t0005g0063
a0001c0001t0005g0072
a0001c0001t0021g0088
a0001c0001t0031g0065
a0001c0001t0032g0163
a0001c0001t0033g0002
 16 HG00673.hp1
HG02040.hp1
HG02071.hp1
others(13): Show 
HG00673.hp1
HG02040.hp1
HG02071.hp1
HG02135.hp1
NA18945.hp1
NA18952.hp1
NA18953.hp1
NA18962.hp1
NA18965.hp1
NA18970.hp1
NA18989.hp1
NA19006.hp1
NA19058.hp1
NA19060.hp1
NA19063.hp1
NA19085.hp1
 intron_variant MODIFIER c.561+9740C>T
c.561+9740C>T
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 5/21 chrX 21480547
chrX:21481465 C
C
 A
A
 1 a0001c0001t0001g0077
a0001c0001t0001g0077
 1 HG00735.hp2
HG00735.hp2
 intron_variant MODIFIER c.562-8994C>A
c.562-8994C>A
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 5/21 chrX 21481465
chrX:21481493 C
C
 T
T
 1 a0001c0001t0002g0043
a0001c0001t0002g0043
 1 HG02809.hp2
HG02809.hp2
 intron_variant MODIFIER c.562-8966C>T
c.562-8966C>T
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 5/21 chrX 21481493
chrX:21482050 C
C
 T
T
 1 a0001c0001t0037g0092
a0001c0001t0037g0092
 1 HG04204.hp1
HG04204.hp1
 intron_variant MODIFIER c.562-8409C>T
c.562-8409C>T
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 5/21 chrX 21482050
chrX:21482233 A
A
 G
G
 12 a0001c0001t0003g0015
a0001c0001t0009g0010
a0001c0001t0009g0011
others(9): Show 
a0001c0001t0003g0015
a0001c0001t0009g0010
a0001c0001t0009g0011
a0001c0001t0009g0012
a0001c0001t0009g0013
a0001c0001t0011g0016
a0001c0001t0011g0017
a0001c0001t0011g0138
a0001c0001t0017g0018
a0001c0001t0019g0014
a0001c0001t0020g0141
a0001c0001t0041g0009
 12 HG01071.hp2
HG01243.hp1
HG01884.hp2
others(9): Show 
HG01071.hp2
HG01243.hp1
HG01884.hp2
HG02280.hp2
HG02572.hp1
HG02717.hp1
HG02809.hp1
HG03041.hp1
HG03098.hp1
HG03486.hp1
HG03579.hp1
NA18522.hp1
 intron_variant MODIFIER c.562-8226A>G
c.562-8226A>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 5/21 chrX 21482233
chrX:21482235 T
T
 G
G
 1 a0001c0001t0042g0008
a0001c0001t0042g0008
 1 HG02647.hp1
HG02647.hp1
 intron_variant MODIFIER c.562-8224T>G
c.562-8224T>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 5/21 chrX 21482235
chrX:21482318 A
A
 G
G
 16 a0001c0001t0003g0015
a0001c0001t0009g0010
a0001c0001t0009g0011
others(13): Show 
a0001c0001t0003g0015
a0001c0001t0009g0010
a0001c0001t0009g0011
a0001c0001t0009g0012
a0001c0001t0009g0013
a0001c0001t0011g0016
a0001c0001t0011g0017
a0001c0001t0011g0138
a0001c0001t0017g0018
a0001c0001t0019g0014
a0001c0001t0020g0141
a0001c0001t0041g0009
a0001c0001t0042g0008
a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
 16 HG01071.hp2
HG01243.hp1
HG01884.hp2
others(13): Show 
HG01071.hp2
HG01243.hp1
HG01884.hp2
HG02280.hp2
HG02572.hp1
HG02615.hp1
HG02647.hp1
HG02717.hp1
HG02809.hp1
HG02965.hp1
HG03041.hp1
HG03098.hp1
HG03471.hp1
HG03486.hp1
HG03579.hp1
NA18522.hp1
 intron_variant MODIFIER c.562-8141A>G
c.562-8141A>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 5/21 chrX 21482318
chrX:21482383 A
A
 ACTTGTGC
others(4): Show 
ACTTGTGCATGT
 18 a0001c0001t0003g0015
a0001c0001t0007g0140
a0001c0001t0009g0010
others(15): Show 
a0001c0001t0003g0015
a0001c0001t0007g0140
a0001c0001t0009g0010
a0001c0001t0009g0011
a0001c0001t0009g0012
a0001c0001t0009g0013
a0001c0001t0011g0016
a0001c0001t0011g0017
a0001c0001t0011g0138
a0001c0001t0017g0018
a0001c0001t0019g0014
a0001c0001t0020g0141
a0001c0001t0041g0009
a0001c0001t0042g0008
a0001c0001t0043g0007
a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
 18 HG01071.hp2
HG01243.hp1
HG01884.hp2
others(15): Show 
HG01071.hp2
HG01243.hp1
HG01884.hp2
HG02280.hp2
HG02572.hp1
HG02615.hp1
HG02647.hp1
HG02717.hp1
HG02809.hp1
HG02922.hp1
HG02965.hp1
HG03041.hp1
HG03098.hp1
HG03471.hp1
HG03486.hp1
HG03491.hp2
HG03579.hp1
NA18522.hp1
 intron_variant MODIFIER c.562-8075_562-8074i
others(13): Show 
c.562-8075_562-8074insTTGTGCATGTC
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 5/21 INFO_REALIGN_3_PRIME chrX 21482383
chrX:21482618 C
C
 T
T
 6 a0001c0001t0004g0020
a0001c0001t0004g0021
a0001c0001t0004g0055
others(3): Show 
a0001c0001t0004g0020
a0001c0001t0004g0021
a0001c0001t0004g0055
a0001c0001t0004g0056
a0001c0001t0004g0057
a0001c0001t0004g0129
 6 HG00609.hp1
HG00741.hp1
HG01192.hp1
others(3): Show 
HG00609.hp1
HG00741.hp1
HG01192.hp1
HG01256.hp1
HG01258.hp1
homoSapiens_chm13v2.hp1
 intron_variant MODIFIER c.562-7841C>T
c.562-7841C>T
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 5/21 chrX 21482618
chrX:21482939 C
C
 A
A
 1 a0001c0001t0002g0050
a0001c0001t0002g0050
 1 NA18944.hp1
NA18944.hp1
 intron_variant MODIFIER c.562-7520C>A
c.562-7520C>A
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 5/21 chrX 21482939
chrX:21483086 G
G
 A
A
 1 a0001c0001t0007g0140
a0001c0001t0007g0140
 1 HG02922.hp1
HG02922.hp1
 intron_variant MODIFIER c.562-7373G>A
c.562-7373G>A
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 5/21 chrX 21483086
chrX:21483117 G
G
 A
A
 1 a0001c0001t0005g0099
a0001c0001t0005g0099
 1 NA18747.hp1
NA18747.hp1
 intron_variant MODIFIER c.562-7342G>A
c.562-7342G>A
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 5/21 chrX 21483117
chrX:21483343 A
A
 G
G
 2 a0001c0001t0003g0116
a0001c0001t0004g0117
a0001c0001t0003g0116
a0001c0001t0004g0117
 2 HG02015.hp1
HG03017.hp1
HG02015.hp1
HG03017.hp1
 intron_variant MODIFIER c.562-7116A>G
c.562-7116A>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 5/21 chrX 21483343
chrX:21483593 A
A
 AAT
AAT
 3 a0001c0001t0001g0001
a0001c0001t0002g0043
a0001c0001t0023g0006
a0001c0001t0001g0001
a0001c0001t0002g0043
a0001c0001t0023g0006
 3 HG02809.hp2
HG03654.hp1
NA19068.hp1
HG02809.hp2
HG03654.hp1
NA19068.hp1
 intron_variant MODIFIER c.562-6844_562-6843d
others(4): Show 
c.562-6844_562-6843dupTA
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 5/21 INFO_REALIGN_3_PRIME chrX 21483593
chrX:21483593 A
A
 AATAT
AATAT
 7 a0001c0001t0002g0111
a0001c0001t0002g0112
a0001c0001t0002g0113
others(4): Show 
a0001c0001t0002g0111
a0001c0001t0002g0112
a0001c0001t0002g0113
a0001c0001t0002g0114
a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
 7 HG00140.hp1
HG00735.hp1
HG00741.hp2
others(4): Show 
HG00140.hp1
HG00735.hp1
HG00741.hp2
HG01433.hp1
HG02615.hp1
HG02965.hp1
HG03471.hp1
 intron_variant MODIFIER c.562-6846_562-6843d
others(6): Show 
c.562-6846_562-6843dupTATA
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 5/21 INFO_REALIGN_3_PRIME chrX 21483593
chrX:21483593 A
A
 AATATAT
AATATAT
 1 a0001c0001t0018g0123
a0001c0001t0018g0123
 1 HG01358.hp1
HG01358.hp1
 intron_variant MODIFIER c.562-6848_562-6843d
others(8): Show 
c.562-6848_562-6843dupTATATA
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 5/21 INFO_REALIGN_3_PRIME chrX 21483593
chrX:21483593 AAT
AAT
 A
A
 45 a0001c0001t0001g0158
a0001c0001t0002g0003
a0001c0001t0002g0004
others(42): Show 
a0001c0001t0001g0158
a0001c0001t0002g0003
a0001c0001t0002g0004
a0001c0001t0002g0019
a0001c0001t0002g0028
a0001c0001t0002g0046
a0001c0001t0002g0047
a0001c0001t0002g0049
a0001c0001t0002g0050
a0001c0001t0002g0110
a0001c0001t0002g0118
a0001c0001t0002g0119
a0001c0001t0002g0120
a0001c0001t0002g0121
a0001c0001t0002g0122
a0001c0001t0002g0125
a0001c0001t0002g0126
a0001c0001t0003g0024
a0001c0001t0003g0029
a0001c0001t0003g0031
a0001c0001t0006g0155
a0001c0001t0006g0157
a0001c0001t0006g0159
a0001c0001t0006g0160
a0001c0001t0006g0161
a0001c0001t0008g0005
a0001c0001t0008g0124
a0001c0001t0008g0135
a0001c0001t0008g0143
a0001c0001t0009g0013
a0001c0001t0010g0152
a0001c0001t0010g0153
a0001c0001t0012g0025
a0001c0001t0012g0045
a0001c0001t0012g0142
a0001c0001t0017g0146
a0001c0001t0024g0156
a0001c0001t0038g0150
a0001c0001t0039g0144
a0001c0001t0040g0027
a0001c0001t0042g0008
a0001c0001t0043g0007
a0001c0007t0036g0026
a0002c0005t0003g0030
a0003c0004t0006g0154
 45 HG00621.hp1
HG01069.hp1
HG01071.hp1
others(42): Show 
HG00621.hp1
HG01069.hp1
HG01071.hp1
HG01081.hp1
HG01106.hp1
HG01109.hp1
HG01884.hp1
HG02074.hp1
HG02083.hp1
HG02145.hp1
HG02258.hp1
HG02280.hp1
HG02615.hp2
HG02647.hp1
HG02886.hp1
HG02886.hp2
HG02895.hp1
HG02922.hp2
HG02976.hp1
HG02976.hp2
HG03130.hp1
HG03139.hp1
HG03225.hp1
HG03486.hp1
HG03486.hp2
HG03491.hp2
HG03516.hp1
NA18612.hp1
NA18943.hp1
NA18944.hp1
NA18966.hp1
NA18986.hp1
NA18990.hp1
NA19000.hp1
NA19004.hp1
NA19012.hp1
NA19043.hp1
NA19055.hp1
NA19070.hp1
NA19076.hp1
NA19086.hp1
NA19091.hp1
NA19240.hp1
NA19240.hp2
NA20300.hp2
 intron_variant MODIFIER c.562-6844_562-6843d
others(4): Show 
c.562-6844_562-6843delTA
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 5/21 INFO_REALIGN_3_PRIME chrX 21483593
chrX:21483773 A
A
 G
G
 3 a0001c0001t0003g0070
a0001c0001t0003g0101
a0001c0001t0035g0054
a0001c0001t0003g0070
a0001c0001t0003g0101
a0001c0001t0035g0054
 3 NA18967.hp1
NA18994.hp1
NA18995.hp1
NA18967.hp1
NA18994.hp1
NA18995.hp1
 intron_variant MODIFIER c.562-6686A>G
c.562-6686A>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 5/21 chrX 21483773
chrX:21483797 C
C
 T
T
 1 a0001c0001t0001g0062
a0001c0001t0001g0062
 1 NA18988.hp1
NA18988.hp1
 intron_variant MODIFIER c.562-6662C>T
c.562-6662C>T
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 5/21 chrX 21483797
chrX:21483871 A
A
 G
G
 1 a0001c0001t0007g0127
a0001c0001t0007g0127
 1 NA19072.hp1
NA19072.hp1
 intron_variant MODIFIER c.562-6588A>G
c.562-6588A>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 5/21 chrX 21483871
chrX:21483899 C
C
 A
A
 3 a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
 3 HG02615.hp1
HG02965.hp1
HG03471.hp1
HG02615.hp1
HG02965.hp1
HG03471.hp1
 intron_variant MODIFIER c.562-6560C>A
c.562-6560C>A
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 5/21 chrX 21483899
chrX:21484289 T
T
 TCAAAA
TCAAAA
 3 a0001c0001t0003g0151
a0001c0001t0030g0086
a0001c0002t0001g0108
a0001c0001t0003g0151
a0001c0001t0030g0086
a0001c0002t0001g0108
 3 HG01081.hp2
HG04199.hp1
NA19056.hp1
HG01081.hp2
HG04199.hp1
NA19056.hp1
 intron_variant MODIFIER c.562-6134_562-6130d
others(7): Show 
c.562-6134_562-6130dupCAAAA
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 5/21 INFO_REALIGN_3_PRIME chrX 21484289
chrX:21484289 TCAAAA
TCAAAA
 T
T
 2 a0001c0001t0001g0053
a0001c0002t0001g0104
a0001c0001t0001g0053
a0001c0002t0001g0104
 2 HG00280.hp1
HG02129.hp1
HG00280.hp1
HG02129.hp1
 intron_variant MODIFIER c.562-6134_562-6130d
others(7): Show 
c.562-6134_562-6130delCAAAA
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 5/21 INFO_REALIGN_3_PRIME chrX 21484289
chrX:21484331 C
C
 T
T
 1 a0001c0001t0020g0141
a0001c0001t0020g0141
 1 HG01243.hp1
HG01243.hp1
 intron_variant MODIFIER c.562-6128C>T
c.562-6128C>T
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 5/21 chrX 21484331
chrX:21484751 C
C
 T
T
 3 a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
 3 HG02615.hp1
HG02965.hp1
HG03471.hp1
HG02615.hp1
HG02965.hp1
HG03471.hp1
 intron_variant MODIFIER c.562-5708C>T
c.562-5708C>T
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 5/21 chrX 21484751
chrX:21485141 C
C
 G
G
 1 a0001c0001t0041g0009
a0001c0001t0041g0009
 1 HG03098.hp1
HG03098.hp1
 intron_variant MODIFIER c.562-5318C>G
c.562-5318C>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 5/21 chrX 21485141
chrX:21485166 A
A
 G
G
 3 a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
 3 HG02615.hp1
HG02965.hp1
HG03471.hp1
HG02615.hp1
HG02965.hp1
HG03471.hp1
 intron_variant MODIFIER c.562-5293A>G
c.562-5293A>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 5/21 chrX 21485166
chrX:21485303 T
T
 C
C
 4 a0001c0001t0001g0071
a0001c0001t0005g0063
a0001c0001t0005g0072
others(1): Show 
a0001c0001t0001g0071
a0001c0001t0005g0063
a0001c0001t0005g0072
a0001c0001t0032g0163
 4 NA18945.hp1
NA18962.hp1
NA19058.hp1
others(1): Show 
NA18945.hp1
NA18962.hp1
NA19058.hp1
NA19063.hp1
 intron_variant MODIFIER c.562-5156T>C
c.562-5156T>C
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 5/21 chrX 21485303
chrX:21485380 ATGCTC
ATGCTC
 A
A
 3 a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
 3 HG02615.hp1
HG02965.hp1
HG03471.hp1
HG02615.hp1
HG02965.hp1
HG03471.hp1
 intron_variant MODIFIER c.562-5071_562-5067d
others(7): Show 
c.562-5071_562-5067delCTCTG
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 5/21 INFO_REALIGN_3_PRIME chrX 21485380
chrX:21485473 G
G
 A
A
 1 a0001c0001t0038g0150
a0001c0001t0038g0150
 1 NA19240.hp1
NA19240.hp1
 intron_variant MODIFIER c.562-4986G>A
c.562-4986G>A
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 5/21 chrX 21485473
chrX:21485495 T
T
 G
G
 1 a0001c0001t0002g0113
a0001c0001t0002g0113
 1 HG00735.hp1
HG00735.hp1
 intron_variant MODIFIER c.562-4964T>G
c.562-4964T>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 5/21 chrX 21485495
chrX:21485540 G
G
 A
A
 1 a0001c0001t0003g0044
a0001c0001t0003g0044
 1 HG03942.hp1
HG03942.hp1
 intron_variant MODIFIER c.562-4919G>A
c.562-4919G>A
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 5/21 chrX 21485540
chrX:21485579 G
G
 GA
GA
 3 a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
 3 HG02615.hp1
HG02965.hp1
HG03471.hp1
HG02615.hp1
HG02965.hp1
HG03471.hp1
 intron_variant MODIFIER c.562-4872dupA
c.562-4872dupA
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 5/21 INFO_REALIGN_3_PRIME chrX 21485579
chrX:21485764 G
G
 T
T
 1 a0001c0001t0002g0019
a0001c0001t0002g0019
 1 HG01106.hp1
HG01106.hp1
 intron_variant MODIFIER c.562-4695G>T
c.562-4695G>T
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 5/21 chrX 21485764
chrX:21485834 TA
TA
 T
T
 1 a0001c0001t0002g0047
a0001c0001t0002g0047
 1 NA19076.hp1
NA19076.hp1
 intron_variant MODIFIER c.562-4623delA
c.562-4623delA
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 5/21 INFO_REALIGN_3_PRIME chrX 21485834
chrX:21485887 A
A
 C
C
 15 a0001c0001t0003g0015
a0001c0001t0009g0010
a0001c0001t0009g0011
others(12): Show 
a0001c0001t0003g0015
a0001c0001t0009g0010
a0001c0001t0009g0011
a0001c0001t0009g0012
a0001c0001t0009g0013
a0001c0001t0011g0016
a0001c0001t0011g0017
a0001c0001t0011g0138
a0001c0001t0019g0014
a0001c0001t0020g0141
a0001c0001t0041g0009
a0001c0001t0042g0008
a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
 15 HG01243.hp1
HG01884.hp2
HG02280.hp2
others(12): Show 
HG01243.hp1
HG01884.hp2
HG02280.hp2
HG02572.hp1
HG02615.hp1
HG02647.hp1
HG02717.hp1
HG02809.hp1
HG02965.hp1
HG03041.hp1
HG03098.hp1
HG03471.hp1
HG03486.hp1
HG03579.hp1
NA18522.hp1
 intron_variant MODIFIER c.562-4572A>C
c.562-4572A>C
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 5/21 chrX 21485887
chrX:21485920 A
A
 C
C
 1 a0001c0001t0001g0062
a0001c0001t0001g0062
 1 NA18988.hp1
NA18988.hp1
 intron_variant MODIFIER c.562-4539A>C
c.562-4539A>C
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 5/21 chrX 21485920
chrX:21485951 AT
AT
 A
A
 1 a0001c0001t0002g0047
a0001c0001t0002g0047
 1 NA19076.hp1
NA19076.hp1
 intron_variant MODIFIER c.562-4507delT
c.562-4507delT
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 5/21 chrX 21485951
chrX:21486004 G
G
 A
A
 1 a0001c0001t0001g0036
a0001c0001t0001g0036
 1 HG04115.hp1
HG04115.hp1
 intron_variant MODIFIER c.562-4455G>A
c.562-4455G>A
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 5/21 chrX 21486004
chrX:21486016 T
T
 C
C
 1 a0001c0001t0001g0082
a0001c0001t0001g0082
 1 HG01928.hp1
HG01928.hp1
 intron_variant MODIFIER c.562-4443T>C
c.562-4443T>C
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 5/21 chrX 21486016
chrX:21486103 A
A
 G
G
 41 a0001c0001t0001g0158
a0001c0001t0002g0028
a0001c0001t0003g0015
others(38): Show 
a0001c0001t0001g0158
a0001c0001t0002g0028
a0001c0001t0003g0015
a0001c0001t0003g0024
a0001c0001t0003g0029
a0001c0001t0003g0151
a0001c0001t0006g0155
a0001c0001t0006g0157
a0001c0001t0006g0159
a0001c0001t0006g0160
a0001c0001t0006g0161
a0001c0001t0007g0140
a0001c0001t0009g0010
a0001c0001t0009g0011
a0001c0001t0009g0012
a0001c0001t0009g0013
a0001c0001t0010g0152
a0001c0001t0010g0153
a0001c0001t0010g0162
a0001c0001t0011g0016
a0001c0001t0011g0017
a0001c0001t0011g0138
a0001c0001t0012g0025
a0001c0001t0017g0018
a0001c0001t0017g0146
a0001c0001t0019g0014
a0001c0001t0020g0141
a0001c0001t0022g0033
a0001c0001t0023g0006
a0001c0001t0024g0156
a0001c0001t0027g0034
a0001c0001t0038g0150
a0001c0001t0040g0027
a0001c0001t0041g0009
a0001c0001t0042g0008
a0001c0001t0043g0007
a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
a0001c0007t0036g0026
a0003c0004t0006g0154
 41 HG01071.hp2
HG01081.hp1
HG01081.hp2
others(38): Show 
HG01071.hp2
HG01081.hp1
HG01081.hp2
HG01109.hp1
HG01243.hp1
HG01884.hp1
HG01884.hp2
HG02055.hp1
HG02258.hp1
HG02280.hp1
HG02280.hp2
HG02486.hp1
HG02572.hp1
HG02615.hp1
HG02615.hp2
HG02647.hp1
HG02717.hp1
HG02809.hp1
HG02886.hp1
HG02895.hp1
HG02922.hp1
HG02922.hp2
HG02965.hp1
HG02976.hp1
HG03041.hp1
HG03098.hp1
HG03130.hp1
HG03209.hp1
HG03225.hp1
HG03471.hp1
HG03486.hp1
HG03486.hp2
HG03491.hp2
HG03516.hp1
HG03579.hp1
HG03654.hp1
NA18522.hp1
NA19043.hp1
NA19240.hp1
NA19240.hp2
NA20300.hp2
 intron_variant MODIFIER c.562-4356A>G
c.562-4356A>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 5/21 chrX 21486103
chrX:21486135 TA
TA
 T
T
 1 a0001c0001t0002g0047
a0001c0001t0002g0047
 1 NA19076.hp1
NA19076.hp1
 intron_variant MODIFIER c.562-4320delA
c.562-4320delA
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 5/21 INFO_REALIGN_3_PRIME chrX 21486135
chrX:21486265 GC
GC
 G
G
 1 a0001c0001t0002g0047
a0001c0001t0002g0047
 1 NA19076.hp1
NA19076.hp1
 intron_variant MODIFIER c.562-4192delC
c.562-4192delC
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 5/21 INFO_REALIGN_3_PRIME chrX 21486265
chrX:21486314 T
T
 C
C
 3 a0001c0001t0002g0004
a0001c0001t0003g0031
a0001c0001t0008g0005
a0001c0001t0002g0004
a0001c0001t0003g0031
a0001c0001t0008g0005
 3 HG01069.hp1
HG01071.hp1
HG02976.hp2
HG01069.hp1
HG01071.hp1
HG02976.hp2
 intron_variant MODIFIER c.562-4145T>C
c.562-4145T>C
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 5/21 chrX 21486314
chrX:21486349 AT
AT
 A
A
 1 a0001c0001t0001g0069
a0001c0001t0001g0069
 1 NA19085.hp1
NA19085.hp1
 intron_variant MODIFIER c.562-4106delT
c.562-4106delT
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 5/21 INFO_REALIGN_3_PRIME chrX 21486349
chrX:21486719 T
T
 C
C
 12 a0001c0001t0003g0015
a0001c0001t0009g0010
a0001c0001t0009g0011
others(9): Show 
a0001c0001t0003g0015
a0001c0001t0009g0010
a0001c0001t0009g0011
a0001c0001t0009g0012
a0001c0001t0009g0013
a0001c0001t0011g0016
a0001c0001t0011g0017
a0001c0001t0011g0138
a0001c0001t0017g0018
a0001c0001t0020g0141
a0001c0001t0041g0009
a0001c0001t0042g0008
 12 HG01071.hp2
HG01243.hp1
HG02280.hp2
others(9): Show 
HG01071.hp2
HG01243.hp1
HG02280.hp2
HG02572.hp1
HG02647.hp1
HG02717.hp1
HG02809.hp1
HG03041.hp1
HG03098.hp1
HG03486.hp1
HG03579.hp1
NA18522.hp1
 intron_variant MODIFIER c.562-3740T>C
c.562-3740T>C
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 5/21 chrX 21486719
chrX:21486760 T
T
 C
C
 1 a0001c0001t0019g0014
a0001c0001t0019g0014
 1 HG01884.hp2
HG01884.hp2
 intron_variant MODIFIER c.562-3699T>C
c.562-3699T>C
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 5/21 chrX 21486760
chrX:21486824 T
T
 A
A
 3 a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
 3 HG02615.hp1
HG02965.hp1
HG03471.hp1
HG02615.hp1
HG02965.hp1
HG03471.hp1
 intron_variant MODIFIER c.562-3635T>A
c.562-3635T>A
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 5/21 chrX 21486824
chrX:21487026 C
C
 T
T
 3 a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
 3 HG02615.hp1
HG02965.hp1
HG03471.hp1
HG02615.hp1
HG02965.hp1
HG03471.hp1
 intron_variant MODIFIER c.562-3433C>T
c.562-3433C>T
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 5/21 chrX 21487026
chrX:21487043 AG
AG
 A
A
 1 a0001c0001t0002g0047
a0001c0001t0002g0047
 1 NA19076.hp1
NA19076.hp1
 intron_variant MODIFIER c.562-3414delG
c.562-3414delG
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 5/21 INFO_REALIGN_3_PRIME chrX 21487043
chrX:21487195 CA
CA
 C
C
 1 a0001c0001t0002g0047
a0001c0001t0002g0047
 1 NA19076.hp1
NA19076.hp1
 intron_variant MODIFIER c.562-3260delA
c.562-3260delA
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 5/21 INFO_REALIGN_3_PRIME chrX 21487195
chrX:21487259 AT
AT
 A
A
 1 a0001c0001t0002g0047
a0001c0001t0002g0047
 1 NA19076.hp1
NA19076.hp1
 intron_variant MODIFIER c.562-3196delT
c.562-3196delT
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 5/21 INFO_REALIGN_3_PRIME chrX 21487259
chrX:21487652 A
A
 AT
AT
 1 a0001c0001t0002g0047
a0001c0001t0002g0047
 1 NA19076.hp1
NA19076.hp1
 intron_variant MODIFIER c.562-2807_562-2806i
others(3): Show 
c.562-2807_562-2806insT
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 5/21 chrX 21487652
chrX:21487657 AG
AG
 A
A
 1 a0001c0001t0002g0047
a0001c0001t0002g0047
 1 NA19076.hp1
NA19076.hp1
 intron_variant MODIFIER c.562-2799delG
c.562-2799delG
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 5/21 INFO_REALIGN_3_PRIME chrX 21487657
chrX:21487693 A
A
 G
G
 1 a0001c0001t0042g0008
a0001c0001t0042g0008
 1 HG02647.hp1
HG02647.hp1
 intron_variant MODIFIER c.562-2766A>G
c.562-2766A>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 5/21 chrX 21487693
chrX:21487715 G
G
 C
C
 2 a0001c0001t0002g0112
a0001c0001t0002g0113
a0001c0001t0002g0112
a0001c0001t0002g0113
 2 HG00735.hp1
HG01433.hp1
HG00735.hp1
HG01433.hp1
 intron_variant MODIFIER c.562-2744G>C
c.562-2744G>C
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 5/21 chrX 21487715
chrX:21487715 G
G
 T
T
 57 a0001c0001t0001g0158
a0001c0001t0002g0003
a0001c0001t0002g0004
others(54): Show 
a0001c0001t0001g0158
a0001c0001t0002g0003
a0001c0001t0002g0004
a0001c0001t0002g0019
a0001c0001t0002g0046
a0001c0001t0002g0047
a0001c0001t0002g0049
a0001c0001t0002g0050
a0001c0001t0002g0110
a0001c0001t0002g0111
a0001c0001t0002g0114
a0001c0001t0002g0118
a0001c0001t0002g0119
a0001c0001t0002g0120
a0001c0001t0002g0121
a0001c0001t0002g0122
a0001c0001t0002g0125
a0001c0001t0002g0126
a0001c0001t0003g0015
a0001c0001t0003g0031
a0001c0001t0003g0151
a0001c0001t0006g0155
a0001c0001t0006g0157
a0001c0001t0006g0159
a0001c0001t0006g0160
a0001c0001t0006g0161
a0001c0001t0007g0140
a0001c0001t0008g0005
a0001c0001t0008g0124
a0001c0001t0008g0135
a0001c0001t0008g0143
a0001c0001t0009g0010
a0001c0001t0009g0011
a0001c0001t0009g0012
a0001c0001t0009g0013
a0001c0001t0010g0152
a0001c0001t0010g0153
a0001c0001t0010g0162
a0001c0001t0011g0016
a0001c0001t0011g0017
a0001c0001t0011g0138
a0001c0001t0012g0045
a0001c0001t0012g0142
a0001c0001t0017g0018
a0001c0001t0019g0014
a0001c0001t0020g0141
a0001c0001t0022g0033
a0001c0001t0024g0156
a0001c0001t0027g0034
a0001c0001t0039g0144
a0001c0001t0041g0009
a0001c0001t0042g0008
a0001c0001t0043g0007
a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
a0003c0004t0006g0154
 57 HG00140.hp1
HG00621.hp1
HG00741.hp2
others(54): Show 
HG00140.hp1
HG00621.hp1
HG00741.hp2
HG01069.hp1
HG01071.hp1
HG01071.hp2
HG01081.hp2
HG01106.hp1
HG01243.hp1
HG01884.hp1
HG01884.hp2
HG02055.hp1
HG02074.hp1
HG02083.hp1
HG02145.hp1
HG02280.hp2
HG02486.hp1
HG02572.hp1
HG02615.hp1
HG02615.hp2
HG02647.hp1
HG02717.hp1
HG02809.hp1
HG02886.hp1
HG02922.hp1
HG02922.hp2
HG02965.hp1
HG02976.hp1
HG02976.hp2
HG03041.hp1
HG03098.hp1
HG03130.hp1
HG03139.hp1
HG03209.hp1
HG03225.hp1
HG03471.hp1
HG03486.hp1
HG03491.hp2
HG03516.hp1
HG03579.hp1
NA18522.hp1
NA18612.hp1
NA18943.hp1
NA18944.hp1
NA18966.hp1
NA18986.hp1
NA18990.hp1
NA19000.hp1
NA19004.hp1
NA19012.hp1
NA19055.hp1
NA19070.hp1
NA19076.hp1
NA19086.hp1
NA19091.hp1
NA19240.hp2
NA20300.hp2
 intron_variant MODIFIER c.562-2744G>T
c.562-2744G>T
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 5/21 chrX 21487715
chrX:21487801 AT
AT
 A
A
 1 a0001c0001t0002g0115
a0001c0001t0002g0115
 1 NA18974.hp1
NA18974.hp1
 intron_variant MODIFIER c.562-2653delT
c.562-2653delT
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 5/21 INFO_REALIGN_3_PRIME chrX 21487801
chrX:21487868 G
G
 GA
GA
 1 a0001c0001t0002g0047
a0001c0001t0002g0047
 1 NA19076.hp1
NA19076.hp1
 intron_variant MODIFIER c.562-2587dupA
c.562-2587dupA
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 5/21 INFO_REALIGN_3_PRIME chrX 21487868
chrX:21487933 AC
AC
 A
A
 1 a0001c0001t0002g0047
a0001c0001t0002g0047
 1 NA19076.hp1
NA19076.hp1
 intron_variant MODIFIER c.562-2524delC
c.562-2524delC
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 5/21 INFO_REALIGN_3_PRIME chrX 21487933
chrX:21488678 A
A
 G
G
 1 a0001c0001t0021g0088
a0001c0001t0021g0088
 1 NA19060.hp1
NA19060.hp1
 intron_variant MODIFIER c.562-1781A>G
c.562-1781A>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 5/21 chrX 21488678
chrX:21488780 G
G
 A
A
 1 a0001c0001t0004g0020
a0001c0001t0004g0020
 1 HG01192.hp1
HG01192.hp1
 intron_variant MODIFIER c.562-1679G>A
c.562-1679G>A
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 5/21 chrX 21488780
chrX:21489449 C
C
 CA
CA
 1 a0001c0001t0003g0136
a0001c0001t0003g0136
 1 NA18965.hp1
NA18965.hp1
 intron_variant MODIFIER c.562-1000dupA
c.562-1000dupA
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 5/21 INFO_REALIGN_3_PRIME chrX 21489449
chrX:21490104 ATTT
ATTT
 A
A
 1 a0001c0001t0009g0013
a0001c0001t0009g0013
 1 HG03486.hp1
HG03486.hp1
 intron_variant MODIFIER c.562-351_562-349del
others(3): Show 
c.562-351_562-349delTTT
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 5/21 INFO_REALIGN_3_PRIME chrX 21490104
chrX:21490384 G
G
 A
A
 3 a0001c0001t0001g0071
a0001c0001t0005g0063
a0001c0001t0005g0072
a0001c0001t0001g0071
a0001c0001t0005g0063
a0001c0001t0005g0072
 3 NA18945.hp1
NA18962.hp1
NA19058.hp1
NA18945.hp1
NA18962.hp1
NA19058.hp1
 intron_variant MODIFIER c.562-75G>A
c.562-75G>A
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 5/21 chrX 21490384
chrX:21490616 A
A
 G
G
 2 a0001c0001t0002g0119
a0001c0001t0002g0122
a0001c0001t0002g0119
a0001c0001t0002g0122
 2 NA18966.hp1
NA19070.hp1
NA18966.hp1
NA19070.hp1
 intron_variant MODIFIER c.681+38A>G
c.681+38A>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 6/21 chrX 21490616
chrX:21490696 A
A
 AT
AT
 1 a0001c0001t0002g0047
a0001c0001t0002g0047
 1 NA19076.hp1
NA19076.hp1
 intron_variant MODIFIER c.681+125dupT
c.681+125dupT
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 6/21 INFO_REALIGN_3_PRIME chrX 21490696
chrX:21490934 G
G
 T
T
 2 a0001c0001t0002g0004
a0001c0001t0008g0005
a0001c0001t0002g0004
a0001c0001t0008g0005
 2 HG01069.hp1
HG01071.hp1
HG01069.hp1
HG01071.hp1
 intron_variant MODIFIER c.681+356G>T
c.681+356G>T
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 6/21 chrX 21490934
chrX:21492200 A
A
 G
G
 3 a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
 3 HG02615.hp1
HG02965.hp1
HG03471.hp1
HG02615.hp1
HG02965.hp1
HG03471.hp1
 intron_variant MODIFIER c.681+1622A>G
c.681+1622A>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 6/21 chrX 21492200
chrX:21492250 C
C
 T
T
 3 a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
 3 HG02615.hp1
HG02965.hp1
HG03471.hp1
HG02615.hp1
HG02965.hp1
HG03471.hp1
 intron_variant MODIFIER c.681+1672C>T
c.681+1672C>T
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 6/21 chrX 21492250
chrX:21492551 C
C
 CT
CT
 1 a0001c0001t0025g0130
a0001c0001t0025g0130
 1 NA19062.hp1
NA19062.hp1
 intron_variant MODIFIER c.681+1980dupT
c.681+1980dupT
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 6/21 INFO_REALIGN_3_PRIME chrX 21492551
chrX:21492591 C
C
 CAG
CAG
 16 a0001c0001t0003g0015
a0001c0001t0009g0010
a0001c0001t0009g0011
others(13): Show 
a0001c0001t0003g0015
a0001c0001t0009g0010
a0001c0001t0009g0011
a0001c0001t0009g0012
a0001c0001t0009g0013
a0001c0001t0011g0016
a0001c0001t0011g0017
a0001c0001t0011g0138
a0001c0001t0017g0018
a0001c0001t0019g0014
a0001c0001t0020g0141
a0001c0001t0041g0009
a0001c0001t0042g0008
a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
 16 HG01071.hp2
HG01243.hp1
HG01884.hp2
others(13): Show 
HG01071.hp2
HG01243.hp1
HG01884.hp2
HG02280.hp2
HG02572.hp1
HG02615.hp1
HG02647.hp1
HG02717.hp1
HG02809.hp1
HG02965.hp1
HG03041.hp1
HG03098.hp1
HG03471.hp1
HG03486.hp1
HG03579.hp1
NA18522.hp1
 intron_variant MODIFIER c.681+2014_681+2015d
others(4): Show 
c.681+2014_681+2015dupAG
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 6/21 INFO_REALIGN_3_PRIME chrX 21492591
chrX:21492677 TG
TG
 T
T
 1 a0001c0001t0039g0144
a0001c0001t0039g0144
 1 NA19055.hp1
NA19055.hp1
 intron_variant MODIFIER c.681+2102delG
c.681+2102delG
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 6/21 INFO_REALIGN_3_PRIME chrX 21492677
chrX:21493023 G
G
 T
T
 3 a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
 3 HG02615.hp1
HG02965.hp1
HG03471.hp1
HG02615.hp1
HG02965.hp1
HG03471.hp1
 intron_variant MODIFIER c.681+2445G>T
c.681+2445G>T
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 6/21 chrX 21493023
chrX:21493146 T
T
 C
C
 6 a0001c0001t0009g0010
a0001c0001t0009g0011
a0001c0001t0009g0012
others(3): Show 
a0001c0001t0009g0010
a0001c0001t0009g0011
a0001c0001t0009g0012
a0001c0001t0009g0013
a0001c0001t0019g0014
a0001c0001t0041g0009
 6 HG01884.hp2
HG02280.hp2
HG02572.hp1
others(3): Show 
HG01884.hp2
HG02280.hp2
HG02572.hp1
HG02809.hp1
HG03098.hp1
HG03486.hp1
 intron_variant MODIFIER c.681+2568T>C
c.681+2568T>C
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 6/21 chrX 21493146
chrX:21493238 T
T
 G
G
 1 a0001c0001t0016g0032
a0001c0001t0016g0032
 1 HG02602.hp1
HG02602.hp1
 intron_variant MODIFIER c.681+2660T>G
c.681+2660T>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 6/21 chrX 21493238
chrX:21493386 A
A
 G
G
 6 a0001c0001t0009g0010
a0001c0001t0009g0011
a0001c0001t0009g0012
others(3): Show 
a0001c0001t0009g0010
a0001c0001t0009g0011
a0001c0001t0009g0012
a0001c0001t0009g0013
a0001c0001t0019g0014
a0001c0001t0041g0009
 6 HG01884.hp2
HG02280.hp2
HG02572.hp1
others(3): Show 
HG01884.hp2
HG02280.hp2
HG02572.hp1
HG02809.hp1
HG03098.hp1
HG03486.hp1
 intron_variant MODIFIER c.681+2808A>G
c.681+2808A>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 6/21 chrX 21493386
chrX:21493499 A
A
 G
G
 1 a0001c0001t0002g0028
a0001c0001t0002g0028
 1 HG02258.hp1
HG02258.hp1
 intron_variant MODIFIER c.681+2921A>G
c.681+2921A>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 6/21 chrX 21493499
chrX:21494221 C
C
 T
T
 1 a0001c0001t0001g0087
a0001c0001t0001g0087
 1 NA20905.hp1
NA20905.hp1
 intron_variant MODIFIER c.682-3566C>T
c.682-3566C>T
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 6/21 chrX 21494221
chrX:21494279 G
G
 A
A
 162 a0001c0001t0001g0001
a0001c0001t0001g0035
a0001c0001t0001g0036
others(159): Show 
a0001c0001t0001g0001
a0001c0001t0001g0035
a0001c0001t0001g0036
a0001c0001t0001g0037
a0001c0001t0001g0039
a0001c0001t0001g0048
a0001c0001t0001g0051
a0001c0001t0001g0052
a0001c0001t0001g0053
a0001c0001t0001g0058
a0001c0001t0001g0060
a0001c0001t0001g0062
a0001c0001t0001g0067
a0001c0001t0001g0068
a0001c0001t0001g0069
a0001c0001t0001g0071
a0001c0001t0001g0073
a0001c0001t0001g0074
a0001c0001t0001g0075
a0001c0001t0001g0076
a0001c0001t0001g0077
a0001c0001t0001g0078
a0001c0001t0001g0080
a0001c0001t0001g0081
a0001c0001t0001g0082
a0001c0001t0001g0083
a0001c0001t0001g0084
a0001c0001t0001g0087
a0001c0001t0001g0089
a0001c0001t0001g0090
a0001c0001t0001g0093
a0001c0001t0001g0094
a0001c0001t0001g0096
a0001c0001t0001g0097
a0001c0001t0001g0102
a0001c0001t0001g0103
a0001c0001t0001g0109
a0001c0001t0001g0128
a0001c0001t0001g0131
a0001c0001t0001g0134
a0001c0001t0001g0137
a0001c0001t0001g0145
a0001c0001t0001g0158
a0001c0001t0002g0003
a0001c0001t0002g0004
a0001c0001t0002g0019
a0001c0001t0002g0028
a0001c0001t0002g0043
a0001c0001t0002g0046
a0001c0001t0002g0047
a0001c0001t0002g0049
a0001c0001t0002g0050
a0001c0001t0002g0110
a0001c0001t0002g0111
a0001c0001t0002g0112
a0001c0001t0002g0113
a0001c0001t0002g0114
a0001c0001t0002g0115
a0001c0001t0002g0118
a0001c0001t0002g0119
a0001c0001t0002g0120
a0001c0001t0002g0121
a0001c0001t0002g0122
a0001c0001t0002g0125
a0001c0001t0002g0126
a0001c0001t0003g0015
a0001c0001t0003g0024
a0001c0001t0003g0029
a0001c0001t0003g0031
a0001c0001t0003g0044
a0001c0001t0003g0061
a0001c0001t0003g0070
a0001c0001t0003g0101
a0001c0001t0003g0116
a0001c0001t0003g0133
a0001c0001t0003g0136
a0001c0001t0003g0151
a0001c0001t0004g0020
a0001c0001t0004g0021
a0001c0001t0004g0055
a0001c0001t0004g0056
a0001c0001t0004g0057
a0001c0001t0004g0064
a0001c0001t0004g0117
a0001c0001t0004g0129
a0001c0001t0004g0132
a0001c0001t0005g0063
a0001c0001t0005g0072
a0001c0001t0005g0079
a0001c0001t0005g0095
a0001c0001t0005g0099
a0001c0001t0006g0155
a0001c0001t0006g0157
a0001c0001t0006g0159
a0001c0001t0006g0160
a0001c0001t0006g0161
a0001c0001t0007g0022
a0001c0001t0007g0127
a0001c0001t0007g0140
a0001c0001t0008g0005
a0001c0001t0008g0124
a0001c0001t0008g0135
a0001c0001t0008g0143
a0001c0001t0009g0010
a0001c0001t0009g0011
a0001c0001t0009g0012
a0001c0001t0009g0013
a0001c0001t0010g0152
a0001c0001t0010g0153
a0001c0001t0010g0162
a0001c0001t0011g0016
a0001c0001t0011g0017
a0001c0001t0011g0138
a0001c0001t0012g0025
a0001c0001t0012g0045
a0001c0001t0012g0142
a0001c0001t0013g0066
a0001c0001t0013g0100
a0001c0001t0015g0038
a0001c0001t0015g0098
a0001c0001t0016g0032
a0001c0001t0016g0085
a0001c0001t0017g0018
a0001c0001t0017g0146
a0001c0001t0018g0123
a0001c0001t0019g0014
a0001c0001t0020g0141
a0001c0001t0021g0088
a0001c0001t0022g0033
a0001c0001t0023g0006
a0001c0001t0024g0156
a0001c0001t0025g0130
a0001c0001t0027g0034
a0001c0001t0029g0023
a0001c0001t0030g0086
a0001c0001t0031g0065
a0001c0001t0032g0163
a0001c0001t0033g0002
a0001c0001t0034g0091
a0001c0001t0035g0054
a0001c0001t0037g0092
a0001c0001t0038g0150
a0001c0001t0039g0144
a0001c0001t0040g0027
a0001c0001t0041g0009
a0001c0001t0042g0008
a0001c0001t0043g0007
a0001c0002t0001g0042
a0001c0002t0001g0104
a0001c0002t0001g0105
a0001c0002t0001g0107
a0001c0002t0001g0108
a0001c0002t0005g0106
a0001c0002t0007g0040
a0001c0002t0007g0041
a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
a0001c0006t0028g0059
a0001c0007t0036g0026
a0002c0005t0003g0030
a0003c0004t0006g0154
 162 HG00140.hp1
HG00280.hp1
HG00609.hp1
others(159): Show 
HG00140.hp1
HG00280.hp1
HG00609.hp1
HG00621.hp1
HG00642.hp1
HG00673.hp1
HG00735.hp1
HG00735.hp2
HG00738.hp1
HG00741.hp1
HG00741.hp2
HG01069.hp1
HG01071.hp1
HG01071.hp2
HG01074.hp1
HG01081.hp1
HG01081.hp2
HG01099.hp1
HG01106.hp1
HG01109.hp1
HG01167.hp1
HG01192.hp1
HG01243.hp1
HG01255.hp1
HG01256.hp1
HG01258.hp1
HG01261.hp1
HG01358.hp1
HG01433.hp1
HG01515.hp1
HG01884.hp1
HG01884.hp2
HG01928.hp1
HG01934.hp1
HG01943.hp1
HG01952.hp1
HG02015.hp1
HG02027.hp1
HG02040.hp1
HG02055.hp1
HG02056.hp1
HG02071.hp1
HG02074.hp1
HG02083.hp1
HG02129.hp1
HG02132.hp1
HG02135.hp1
HG02145.hp1
HG02258.hp1
HG02280.hp1
HG02280.hp2
HG02300.hp1
HG02486.hp1
HG02572.hp1
HG02602.hp1
HG02615.hp1
HG02615.hp2
HG02647.hp1
HG02698.hp1
HG02717.hp1
HG02735.hp1
HG02738.hp1
HG02809.hp1
HG02809.hp2
HG02886.hp1
HG02886.hp2
HG02895.hp1
HG02922.hp1
HG02922.hp2
HG02965.hp1
HG02976.hp1
HG02976.hp2
HG03017.hp1
HG03041.hp1
HG03041.hp2
HG03098.hp1
HG03130.hp1
HG03139.hp1
HG03209.hp1
HG03225.hp1
HG03471.hp1
HG03486.hp1
HG03486.hp2
HG03490.hp1
HG03491.hp1
HG03491.hp2
HG03492.hp1
HG03516.hp1
HG03516.hp2
HG03579.hp1
HG03654.hp1
HG03688.hp1
HG03710.hp1
HG03942.hp1
HG04115.hp1
HG04199.hp1
HG04204.hp1
HG04228.hp1
NA18522.hp1
NA18612.hp1
NA18747.hp1
NA18943.hp1
NA18944.hp1
NA18945.hp1
NA18948.hp1
NA18952.hp1
NA18953.hp1
NA18955.hp1
NA18959.hp1
NA18960.hp1
NA18961.hp1
NA18962.hp1
NA18965.hp1
NA18966.hp1
NA18967.hp1
NA18970.hp1
NA18971.hp1
NA18974.hp1
NA18977.hp1
NA18982.hp1
NA18983.hp1
NA18984.hp1
NA18986.hp1
NA18988.hp1
NA18989.hp1
NA18990.hp1
NA18994.hp1
NA18995.hp1
NA19000.hp1
NA19004.hp1
NA19005.hp1
NA19006.hp1
NA19007.hp1
NA19009.hp1
NA19012.hp1
NA19043.hp1
NA19055.hp1
NA19056.hp1
NA19058.hp1
NA19060.hp1
NA19062.hp1
NA19063.hp1
NA19066.hp1
NA19068.hp1
NA19070.hp1
NA19072.hp1
NA19076.hp1
NA19079.hp1
NA19082.hp1
NA19085.hp1
NA19086.hp1
NA19088.hp1
NA19089.hp1
NA19091.hp1
NA19240.hp1
NA19240.hp2
NA20300.hp1
NA20300.hp2
NA20752.hp1
NA20805.hp1
NA20905.hp1
homoSapiens_chm13v2.hp1
 intron_variant MODIFIER c.682-3508G>A
c.682-3508G>A
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 6/21 chrX 21494279
chrX:21495113 T
T
 A
A
 1 a0001c0001t0042g0008
a0001c0001t0042g0008
 1 HG02647.hp1
HG02647.hp1
 intron_variant MODIFIER c.682-2674T>A
c.682-2674T>A
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 6/21 chrX 21495113
chrX:21495149 G
G
 A
A
 1 a0001c0001t0042g0008
a0001c0001t0042g0008
 1 HG02647.hp1
HG02647.hp1
 intron_variant MODIFIER c.682-2638G>A
c.682-2638G>A
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 6/21 chrX 21495149
chrX:21495178 T
T
 C
C
 3 a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
 3 HG02615.hp1
HG02965.hp1
HG03471.hp1
HG02615.hp1
HG02965.hp1
HG03471.hp1
 intron_variant MODIFIER c.682-2609T>C
c.682-2609T>C
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 6/21 chrX 21495178
chrX:21495608 A
A
 AC
AC
 30 a0001c0001t0001g0060
a0001c0001t0001g0158
a0001c0001t0003g0015
others(27): Show 
a0001c0001t0001g0060
a0001c0001t0001g0158
a0001c0001t0003g0015
a0001c0001t0006g0155
a0001c0001t0006g0157
a0001c0001t0006g0159
a0001c0001t0006g0160
a0001c0001t0006g0161
a0001c0001t0009g0010
a0001c0001t0009g0011
a0001c0001t0009g0012
a0001c0001t0009g0013
a0001c0001t0010g0152
a0001c0001t0010g0153
a0001c0001t0010g0162
a0001c0001t0011g0016
a0001c0001t0011g0017
a0001c0001t0011g0138
a0001c0001t0017g0018
a0001c0001t0019g0014
a0001c0001t0020g0141
a0001c0001t0023g0006
a0001c0001t0024g0156
a0001c0001t0041g0009
a0001c0001t0042g0008
a0001c0001t0043g0007
a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
a0003c0004t0006g0154
 30 HG01071.hp2
HG01243.hp1
HG01884.hp1
others(27): Show 
HG01071.hp2
HG01243.hp1
HG01884.hp1
HG01884.hp2
HG02280.hp2
HG02572.hp1
HG02615.hp1
HG02615.hp2
HG02647.hp1
HG02717.hp1
HG02809.hp1
HG02886.hp1
HG02922.hp2
HG02965.hp1
HG02976.hp1
HG03041.hp1
HG03041.hp2
HG03098.hp1
HG03130.hp1
HG03209.hp1
HG03225.hp1
HG03471.hp1
HG03486.hp1
HG03491.hp2
HG03516.hp1
HG03579.hp1
HG03654.hp1
NA18522.hp1
NA19240.hp2
NA20300.hp2
 intron_variant MODIFIER c.682-2176dupC
c.682-2176dupC
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 6/21 INFO_REALIGN_3_PRIME chrX 21495608
chrX:21495628 CA
CA
 C
C
 2 a0001c0001t0023g0006
a0001c0001t0043g0007
a0001c0001t0023g0006
a0001c0001t0043g0007
 2 HG03491.hp2
HG03654.hp1
HG03491.hp2
HG03654.hp1
 intron_variant MODIFIER c.682-2154delA
c.682-2154delA
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 6/21 INFO_REALIGN_3_PRIME chrX 21495628
chrX:21495666 C
C
 T
T
 1 a0001c0001t0002g0114
a0001c0001t0002g0114
 1 HG00140.hp1
HG00140.hp1
 intron_variant MODIFIER c.682-2121C>T
c.682-2121C>T
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 6/21 chrX 21495666
chrX:21495783 C
C
 CA
CA
 13 a0001c0001t0001g0083
a0001c0001t0001g0128
a0001c0001t0001g0131
others(10): Show 
a0001c0001t0001g0083
a0001c0001t0001g0128
a0001c0001t0001g0131
a0001c0001t0001g0145
a0001c0001t0004g0021
a0001c0001t0004g0055
a0001c0001t0004g0057
a0001c0001t0015g0098
a0001c0001t0018g0123
a0001c0001t0021g0088
a0001c0001t0032g0163
a0001c0001t0035g0054
a0001c0002t0007g0040
 13 HG01256.hp1
HG01258.hp1
HG01358.hp1
others(10): Show 
HG01256.hp1
HG01258.hp1
HG01358.hp1
HG01952.hp1
HG02027.hp1
NA18959.hp1
NA18967.hp1
NA19060.hp1
NA19063.hp1
NA19066.hp1
NA19082.hp1
NA20300.hp1
homoSapiens_chm13v2.hp1
 intron_variant MODIFIER c.682-1965dupA
c.682-1965dupA
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 6/21 INFO_REALIGN_3_PRIME chrX 21495783
chrX:21495783 C
C
 CAA
CAA
 3 a0001c0001t0003g0101
a0001c0001t0004g0129
a0001c0001t0041g0009
a0001c0001t0003g0101
a0001c0001t0004g0129
a0001c0001t0041g0009
 3 HG00609.hp1
HG03098.hp1
NA18995.hp1
HG00609.hp1
HG03098.hp1
NA18995.hp1
 intron_variant MODIFIER c.682-1966_682-1965d
others(4): Show 
c.682-1966_682-1965dupAA
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 6/21 INFO_REALIGN_3_PRIME chrX 21495783
chrX:21495783 C
C
 CAAAA
CAAAA
 1 a0001c0001t0003g0116
a0001c0001t0003g0116
 1 HG03017.hp1
HG03017.hp1
 intron_variant MODIFIER c.682-1968_682-1965d
others(6): Show 
c.682-1968_682-1965dupAAAA
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 6/21 INFO_REALIGN_3_PRIME chrX 21495783
chrX:21495783 C
C
 CAAAAA
CAAAAA
 1 a0001c0001t0006g0161
a0001c0001t0006g0161
 1 HG02976.hp1
HG02976.hp1
 intron_variant MODIFIER c.682-1969_682-1965d
others(7): Show 
c.682-1969_682-1965dupAAAAA
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 6/21 INFO_REALIGN_3_PRIME chrX 21495783
chrX:21495783 C
C
 CAAAAAA
CAAAAAA
 5 a0001c0001t0010g0153
a0001c0001t0016g0032
a0001c0001t0017g0018
others(2): Show 
a0001c0001t0010g0153
a0001c0001t0016g0032
a0001c0001t0017g0018
a0001c0001t0023g0006
a0001c0001t0024g0156
 5 HG01071.hp2
HG02602.hp1
HG03654.hp1
others(2): Show 
HG01071.hp2
HG02602.hp1
HG03654.hp1
NA19240.hp2
NA20300.hp2
 intron_variant MODIFIER c.682-1970_682-1965d
others(8): Show 
c.682-1970_682-1965dupAAAAAA
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 6/21 INFO_REALIGN_3_PRIME chrX 21495783
chrX:21495783 C
C
 CAAAAAAA
CAAAAAAA
 8 a0001c0001t0001g0158
a0001c0001t0003g0061
a0001c0001t0004g0117
others(5): Show 
a0001c0001t0001g0158
a0001c0001t0003g0061
a0001c0001t0004g0117
a0001c0001t0006g0157
a0001c0001t0006g0159
a0001c0001t0006g0160
a0001c0001t0010g0152
a0001c0001t0010g0162
 8 HG02015.hp1
HG02615.hp2
HG02886.hp1
others(5): Show 
HG02015.hp1
HG02615.hp2
HG02886.hp1
HG03130.hp1
HG03209.hp1
HG03225.hp1
HG03516.hp1
NA18970.hp1
 intron_variant MODIFIER c.682-1971_682-1965d
others(9): Show 
c.682-1971_682-1965dupAAAAAAA
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 6/21 INFO_REALIGN_3_PRIME chrX 21495783
chrX:21495783 C
C
 CAAAAAAA
others(2): Show 
CAAAAAAAAA
 1 a0001c0001t0001g0053
a0001c0001t0001g0053
 1 HG00280.hp1
HG00280.hp1
 intron_variant MODIFIER c.682-1973_682-1965d
others(11): Show 
c.682-1973_682-1965dupAAAAAAAAA
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 6/21 INFO_REALIGN_3_PRIME chrX 21495783
chrX:21495783 C
C
 CAAAAAAA
others(10): Show 
CAAAAAAAAAAAAAAAAA
 1 a0003c0004t0006g0154
a0003c0004t0006g0154
 1 HG01884.hp1
HG01884.hp1
 intron_variant MODIFIER c.682-1981_682-1965d
others(19): Show 
c.682-1981_682-1965dupAAAAAAAAAAAAAAAAA
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 6/21 INFO_REALIGN_3_PRIME chrX 21495783
chrX:21495783 C
C
 CAAAAAAA
others(18): Show 
CAAAAAAAAAAAAAAAAAAAAAAAAA
 1 a0001c0001t0004g0020
a0001c0001t0004g0020
 1 HG01192.hp1
HG01192.hp1
 intron_variant MODIFIER c.682-1989_682-1965d
others(27): Show 
c.682-1989_682-1965dupAAAAAAAAAAAAAAAAAAAAAAAAA
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 6/21 INFO_REALIGN_3_PRIME chrX 21495783
chrX:21495783 CA
CA
 C
C
 41 a0001c0001t0001g0001
a0001c0001t0001g0036
a0001c0001t0001g0051
others(38): Show 
a0001c0001t0001g0001
a0001c0001t0001g0036
a0001c0001t0001g0051
a0001c0001t0001g0073
a0001c0001t0001g0076
a0001c0001t0001g0084
a0001c0001t0001g0093
a0001c0001t0001g0103
a0001c0001t0002g0043
a0001c0001t0002g0046
a0001c0001t0002g0047
a0001c0001t0002g0120
a0001c0001t0002g0122
a0001c0001t0002g0126
a0001c0001t0003g0031
a0001c0001t0003g0133
a0001c0001t0004g0056
a0001c0001t0004g0132
a0001c0001t0005g0079
a0001c0001t0005g0095
a0001c0001t0007g0022
a0001c0001t0007g0127
a0001c0001t0008g0143
a0001c0001t0012g0045
a0001c0001t0012g0142
a0001c0001t0017g0146
a0001c0001t0020g0141
a0001c0001t0027g0034
a0001c0001t0029g0023
a0001c0001t0030g0086
a0001c0001t0034g0091
a0001c0001t0037g0092
a0001c0001t0038g0150
a0001c0001t0039g0144
a0001c0002t0001g0104
a0001c0002t0001g0105
a0001c0002t0001g0107
a0001c0002t0001g0108
a0001c0002t0005g0106
a0001c0006t0028g0059
a0001c0007t0036g0026
 41 HG00741.hp1
HG01074.hp1
HG01081.hp1
others(38): Show 
HG00741.hp1
HG01074.hp1
HG01081.hp1
HG01099.hp1
HG01109.hp1
HG01243.hp1
HG01261.hp1
HG01515.hp1
HG01943.hp1
HG02083.hp1
HG02129.hp1
HG02132.hp1
HG02145.hp1
HG02486.hp1
HG02735.hp1
HG02809.hp2
HG02976.hp2
HG03139.hp1
HG03491.hp1
HG03516.hp2
HG04115.hp1
HG04199.hp1
HG04204.hp1
NA18943.hp1
NA18953.hp1
NA18960.hp1
NA18961.hp1
NA18982.hp1
NA18984.hp1
NA18986.hp1
NA18990.hp1
NA19055.hp1
NA19056.hp1
NA19068.hp1
NA19070.hp1
NA19072.hp1
NA19076.hp1
NA19079.hp1
NA19240.hp1
NA20752.hp1
NA20805.hp1
 intron_variant MODIFIER c.682-1965delA
c.682-1965delA
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 6/21 INFO_REALIGN_3_PRIME chrX 21495783
chrX:21495783 CAA
CAA
 C
C
 17 a0001c0001t0002g0049
a0001c0001t0002g0111
a0001c0001t0002g0113
others(14): Show 
a0001c0001t0002g0049
a0001c0001t0002g0111
a0001c0001t0002g0113
a0001c0001t0002g0115
a0001c0001t0002g0119
a0001c0001t0002g0121
a0001c0001t0002g0125
a0001c0001t0003g0024
a0001c0001t0003g0029
a0001c0001t0003g0151
a0001c0001t0005g0099
a0001c0001t0007g0140
a0001c0001t0011g0017
a0001c0001t0012g0025
a0001c0001t0013g0066
a0001c0001t0022g0033
a0002c0005t0003g0030
 17 HG00735.hp1
HG00741.hp2
HG01081.hp2
others(14): Show 
HG00735.hp1
HG00741.hp2
HG01081.hp2
HG01167.hp1
HG02055.hp1
HG02280.hp1
HG02886.hp2
HG02895.hp1
HG02922.hp1
HG03486.hp2
HG03579.hp1
NA18612.hp1
NA18747.hp1
NA18966.hp1
NA18974.hp1
NA19004.hp1
NA19091.hp1
 intron_variant MODIFIER c.682-1966_682-1965d
others(4): Show 
c.682-1966_682-1965delAA
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 6/21 INFO_REALIGN_3_PRIME chrX 21495783
chrX:21495783 CAAA
CAAA
 C
C
 9 a0001c0001t0001g0060
a0001c0001t0002g0028
a0001c0001t0002g0112
others(6): Show 
a0001c0001t0001g0060
a0001c0001t0002g0028
a0001c0001t0002g0112
a0001c0001t0003g0015
a0001c0001t0009g0011
a0001c0001t0009g0012
a0001c0001t0009g0013
a0001c0001t0011g0138
a0001c0001t0040g0027
 9 HG01433.hp1
HG02258.hp1
HG02572.hp1
others(6): Show 
HG01433.hp1
HG02258.hp1
HG02572.hp1
HG02717.hp1
HG02809.hp1
HG03041.hp1
HG03041.hp2
HG03486.hp1
NA19043.hp1
 intron_variant MODIFIER c.682-1967_682-1965d
others(5): Show 
c.682-1967_682-1965delAAA
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 6/21 INFO_REALIGN_3_PRIME chrX 21495783
chrX:21495783 CAAAA
CAAAA
 C
C
 3 a0001c0001t0002g0114
a0001c0001t0011g0016
a0001c0003t0026g0148
a0001c0001t0002g0114
a0001c0001t0011g0016
a0001c0003t0026g0148
 3 HG00140.hp1
HG02965.hp1
NA18522.hp1
HG00140.hp1
HG02965.hp1
NA18522.hp1
 intron_variant MODIFIER c.682-1968_682-1965d
others(6): Show 
c.682-1968_682-1965delAAAA
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 6/21 INFO_REALIGN_3_PRIME chrX 21495783
chrX:21495783 CAAAAA
CAAAAA
 C
C
 2 a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0014g0147
a0001c0003t0014g0149
 2 HG02615.hp1
HG03471.hp1
HG02615.hp1
HG03471.hp1
 intron_variant MODIFIER c.682-1969_682-1965d
others(7): Show 
c.682-1969_682-1965delAAAAA
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 6/21 INFO_REALIGN_3_PRIME chrX 21495783
chrX:21495783 CAAAAAA
CAAAAAA
 C
C
 1 a0001c0001t0043g0007
a0001c0001t0043g0007
 1 HG03491.hp2
HG03491.hp2
 intron_variant MODIFIER c.682-1970_682-1965d
others(8): Show 
c.682-1970_682-1965delAAAAAA
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 6/21 INFO_REALIGN_3_PRIME chrX 21495783
chrX:21495783 CAAAAAAA
CAAAAAAA
 C
C
 3 a0001c0001t0001g0048
a0001c0001t0001g0067
a0001c0001t0031g0065
a0001c0001t0001g0048
a0001c0001t0001g0067
a0001c0001t0031g0065
 3 HG00673.hp1
HG02040.hp1
NA18952.hp1
HG00673.hp1
HG02040.hp1
NA18952.hp1
 intron_variant MODIFIER c.682-1971_682-1965d
others(9): Show 
c.682-1971_682-1965delAAAAAAA
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 6/21 INFO_REALIGN_3_PRIME chrX 21495783
chrX:21495783 CAAAAAAA
others(1): Show 
CAAAAAAAA
 C
C
 5 a0001c0001t0001g0037
a0001c0001t0001g0069
a0001c0001t0002g0004
others(2): Show 
a0001c0001t0001g0037
a0001c0001t0001g0069
a0001c0001t0002g0004
a0001c0001t0003g0136
a0001c0001t0033g0002
 5 HG01071.hp1
HG02135.hp1
NA18965.hp1
others(2): Show 
HG01071.hp1
HG02135.hp1
NA18965.hp1
NA19006.hp1
NA19085.hp1
 intron_variant MODIFIER c.682-1972_682-1965d
others(10): Show 
c.682-1972_682-1965delAAAAAAAA
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 6/21 INFO_REALIGN_3_PRIME chrX 21495783
chrX:21495783 CAAAAAAA
others(2): Show 
CAAAAAAAAA
 C
C
 2 a0001c0001t0001g0068
a0001c0001t0008g0005
a0001c0001t0001g0068
a0001c0001t0008g0005
 2 HG01069.hp1
NA18989.hp1
HG01069.hp1
NA18989.hp1
 intron_variant MODIFIER c.682-1973_682-1965d
others(11): Show 
c.682-1973_682-1965delAAAAAAAAA
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 6/21 INFO_REALIGN_3_PRIME chrX 21495783
chrX:21495783 CAAAAAAA
others(4): Show 
CAAAAAAAAAAA
 C
C
 1 a0001c0001t0015g0038
a0001c0001t0015g0038
 1 HG03688.hp1
HG03688.hp1
 intron_variant MODIFIER c.682-1975_682-1965d
others(13): Show 
c.682-1975_682-1965delAAAAAAAAAAA
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 6/21 INFO_REALIGN_3_PRIME chrX 21495783
chrX:21495783 CAAAAAAA
others(5): Show 
CAAAAAAAAAAAA
 C
C
 1 a0001c0002t0001g0042
a0001c0002t0001g0042
 1 HG01934.hp1
HG01934.hp1
 intron_variant MODIFIER c.682-1976_682-1965d
others(14): Show 
c.682-1976_682-1965delAAAAAAAAAAAA
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 6/21 INFO_REALIGN_3_PRIME chrX 21495783
chrX:21495783 CAAAAAAA
others(9): Show 
CAAAAAAAAAAAAAAAA
 C
C
 1 a0001c0001t0006g0155
a0001c0001t0006g0155
 1 HG02922.hp2
HG02922.hp2
 intron_variant MODIFIER c.682-1980_682-1965d
others(18): Show 
c.682-1980_682-1965delAAAAAAAAAAAAAAAA
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 6/21 INFO_REALIGN_3_PRIME chrX 21495783
chrX:21495783 CAAAAAAA
others(10): Show 
CAAAAAAAAAAAAAAAAA
 C
C
 1 a0001c0001t0002g0019
a0001c0001t0002g0019
 1 HG01106.hp1
HG01106.hp1
 intron_variant MODIFIER c.682-1981_682-1965d
others(19): Show 
c.682-1981_682-1965delAAAAAAAAAAAAAAAAA
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 6/21 INFO_REALIGN_3_PRIME chrX 21495783
chrX:21495783 CAAAAAAA
others(11): Show 
CAAAAAAAAAAAAAAAAAA
 C
C
 4 a0001c0001t0002g0003
a0001c0001t0002g0110
a0001c0001t0002g0118
others(1): Show 
a0001c0001t0002g0003
a0001c0001t0002g0110
a0001c0001t0002g0118
a0001c0001t0008g0124
 4 HG00621.hp1
HG02074.hp1
NA19012.hp1
others(1): Show 
HG00621.hp1
HG02074.hp1
NA19012.hp1
NA19086.hp1
 intron_variant MODIFIER c.682-1982_682-1965d
others(20): Show 
c.682-1982_682-1965delAAAAAAAAAAAAAAAAAA
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 6/21 INFO_REALIGN_3_PRIME chrX 21495783
chrX:21495783 CAAAAAAA
others(12): Show 
CAAAAAAAAAAAAAAAAAAA
 C
C
 1 a0001c0001t0001g0137
a0001c0001t0001g0137
 1 HG03490.hp1
HG03490.hp1
 intron_variant MODIFIER c.682-1983_682-1965d
others(21): Show 
c.682-1983_682-1965delAAAAAAAAAAAAAAAAAAA
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 6/21 INFO_REALIGN_3_PRIME chrX 21495783
chrX:21495822 A
A
 AC
AC
 1 a0001c0001t0004g0064
a0001c0001t0004g0064
 1 HG00738.hp1
HG00738.hp1
 intron_variant MODIFIER c.682-1964dupC
c.682-1964dupC
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 6/21 INFO_REALIGN_3_PRIME chrX 21495822
chrX:21495822 A
A
 C
C
 9 a0001c0001t0002g0028
a0001c0001t0003g0024
a0001c0001t0003g0029
others(6): Show 
a0001c0001t0002g0028
a0001c0001t0003g0024
a0001c0001t0003g0029
a0001c0001t0012g0025
a0001c0001t0017g0146
a0001c0001t0038g0150
a0001c0001t0040g0027
a0001c0007t0036g0026
a0002c0005t0003g0030
 9 HG01081.hp1
HG01109.hp1
HG02258.hp1
others(6): Show 
HG01081.hp1
HG01109.hp1
HG02258.hp1
HG02280.hp1
HG02886.hp2
HG02895.hp1
HG03486.hp2
NA19043.hp1
NA19240.hp1
 intron_variant MODIFIER c.682-1965A>C
c.682-1965A>C
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 6/21 chrX 21495822
chrX:21495911 T
T
 C
C
 17 a0001c0001t0001g0158
a0001c0001t0006g0155
a0001c0001t0006g0157
others(14): Show 
a0001c0001t0001g0158
a0001c0001t0006g0155
a0001c0001t0006g0157
a0001c0001t0006g0159
a0001c0001t0006g0160
a0001c0001t0006g0161
a0001c0001t0010g0152
a0001c0001t0010g0153
a0001c0001t0010g0162
a0001c0001t0017g0018
a0001c0001t0023g0006
a0001c0001t0024g0156
a0001c0001t0043g0007
a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
a0003c0004t0006g0154
 17 HG01071.hp2
HG01884.hp1
HG02615.hp1
others(14): Show 
HG01071.hp2
HG01884.hp1
HG02615.hp1
HG02615.hp2
HG02886.hp1
HG02922.hp2
HG02965.hp1
HG02976.hp1
HG03130.hp1
HG03209.hp1
HG03225.hp1
HG03471.hp1
HG03491.hp2
HG03516.hp1
HG03654.hp1
NA19240.hp2
NA20300.hp2
 intron_variant MODIFIER c.682-1876T>C
c.682-1876T>C
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 6/21 chrX 21495911
chrX:21496492 T
T
 C
C
 3 a0001c0001t0001g0093
a0001c0001t0001g0097
a0001c0001t0018g0123
a0001c0001t0001g0093
a0001c0001t0001g0097
a0001c0001t0018g0123
 3 HG01358.hp1
HG04228.hp1
NA20805.hp1
HG01358.hp1
HG04228.hp1
NA20805.hp1
 intron_variant MODIFIER c.682-1295T>C
c.682-1295T>C
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 6/21 chrX 21496492
chrX:21496757 G
G
 T
T
 3 a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
 3 HG02615.hp1
HG02965.hp1
HG03471.hp1
HG02615.hp1
HG02965.hp1
HG03471.hp1
 intron_variant MODIFIER c.682-1030G>T
c.682-1030G>T
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 6/21 chrX 21496757
chrX:21497528 T
T
 A
A
 1 a0001c0001t0012g0045
a0001c0001t0012g0045
 1 HG02145.hp1
HG02145.hp1
 intron_variant MODIFIER c.682-259T>A
c.682-259T>A
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 6/21 chrX 21497528
chrX:21497553 T
T
 C
C
 1 a0001c0001t0001g0039
a0001c0001t0001g0039
 1 HG00642.hp1
HG00642.hp1
 intron_variant MODIFIER c.682-234T>C
c.682-234T>C
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 6/21 chrX 21497553
chrX:21497748 A
A
 G
G
 1 a0001c0001t0002g0111
a0001c0001t0002g0111
 1 HG00741.hp2
HG00741.hp2
 intron_variant MODIFIER c.682-39A>G
c.682-39A>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 6/21 chrX 21497748
chrX:21497898 T
T
 C
C
 23 a0001c0001t0001g0001
a0001c0001t0002g0003
a0001c0001t0002g0046
others(20): Show 
a0001c0001t0001g0001
a0001c0001t0002g0003
a0001c0001t0002g0046
a0001c0001t0002g0047
a0001c0001t0002g0049
a0001c0001t0002g0050
a0001c0001t0002g0110
a0001c0001t0002g0111
a0001c0001t0002g0112
a0001c0001t0002g0113
a0001c0001t0002g0114
a0001c0001t0002g0118
a0001c0001t0002g0119
a0001c0001t0002g0120
a0001c0001t0002g0121
a0001c0001t0002g0122
a0001c0001t0002g0125
a0001c0001t0002g0126
a0001c0001t0008g0124
a0001c0001t0008g0135
a0001c0001t0008g0143
a0001c0001t0012g0142
a0001c0001t0039g0144
 23 HG00140.hp1
HG00621.hp1
HG00735.hp1
others(20): Show 
HG00140.hp1
HG00621.hp1
HG00735.hp1
HG00741.hp2
HG01433.hp1
HG02074.hp1
HG02083.hp1
HG03139.hp1
NA18612.hp1
NA18943.hp1
NA18944.hp1
NA18966.hp1
NA18986.hp1
NA18990.hp1
NA19000.hp1
NA19004.hp1
NA19012.hp1
NA19055.hp1
NA19068.hp1
NA19070.hp1
NA19076.hp1
NA19086.hp1
NA19091.hp1
 intron_variant MODIFIER c.741+52T>C
c.741+52T>C
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 7/21 chrX 21497898
chrX:21498017 C
C
 CT
CT
 1 a0001c0001t0019g0014
a0001c0001t0019g0014
 1 HG01884.hp2
HG01884.hp2
 intron_variant MODIFIER c.741+180dupT
c.741+180dupT
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 7/21 INFO_REALIGN_3_PRIME chrX 21498017
chrX:21498483 CT
CT
 C
C
 69 a0001c0001t0001g0158
a0001c0001t0002g0003
a0001c0001t0002g0004
others(66): Show 
a0001c0001t0001g0158
a0001c0001t0002g0003
a0001c0001t0002g0004
a0001c0001t0002g0019
a0001c0001t0002g0028
a0001c0001t0002g0043
a0001c0001t0002g0046
a0001c0001t0002g0047
a0001c0001t0002g0049
a0001c0001t0002g0050
a0001c0001t0002g0110
a0001c0001t0002g0111
a0001c0001t0002g0112
a0001c0001t0002g0113
a0001c0001t0002g0114
a0001c0001t0002g0118
a0001c0001t0002g0119
a0001c0001t0002g0120
a0001c0001t0002g0121
a0001c0001t0002g0122
a0001c0001t0002g0125
a0001c0001t0002g0126
a0001c0001t0003g0015
a0001c0001t0003g0024
a0001c0001t0003g0029
a0001c0001t0003g0031
a0001c0001t0003g0151
a0001c0001t0006g0155
a0001c0001t0006g0157
a0001c0001t0006g0159
a0001c0001t0006g0160
a0001c0001t0006g0161
a0001c0001t0007g0140
a0001c0001t0008g0005
a0001c0001t0008g0124
a0001c0001t0008g0135
a0001c0001t0008g0143
a0001c0001t0009g0010
a0001c0001t0009g0011
a0001c0001t0009g0012
a0001c0001t0009g0013
a0001c0001t0010g0152
a0001c0001t0010g0153
a0001c0001t0010g0162
a0001c0001t0011g0016
a0001c0001t0011g0017
a0001c0001t0011g0138
a0001c0001t0012g0025
a0001c0001t0012g0045
a0001c0001t0012g0142
a0001c0001t0017g0018
a0001c0001t0017g0146
a0001c0001t0019g0014
a0001c0001t0020g0141
a0001c0001t0022g0033
a0001c0001t0024g0156
a0001c0001t0027g0034
a0001c0001t0038g0150
a0001c0001t0039g0144
a0001c0001t0040g0027
a0001c0001t0041g0009
a0001c0001t0042g0008
a0001c0001t0043g0007
a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
a0001c0007t0036g0026
a0002c0005t0003g0030
a0003c0004t0006g0154
 69 HG00140.hp1
HG00621.hp1
HG00735.hp1
others(66): Show 
HG00140.hp1
HG00621.hp1
HG00735.hp1
HG00741.hp2
HG01069.hp1
HG01071.hp1
HG01071.hp2
HG01081.hp1
HG01081.hp2
HG01106.hp1
HG01109.hp1
HG01243.hp1
HG01433.hp1
HG01884.hp1
HG01884.hp2
HG02055.hp1
HG02074.hp1
HG02083.hp1
HG02145.hp1
HG02258.hp1
HG02280.hp1
HG02280.hp2
HG02486.hp1
HG02572.hp1
HG02615.hp1
HG02615.hp2
HG02647.hp1
HG02717.hp1
HG02809.hp1
HG02809.hp2
HG02886.hp1
HG02886.hp2
HG02895.hp1
HG02922.hp1
HG02922.hp2
HG02965.hp1
HG02976.hp1
HG02976.hp2
HG03041.hp1
HG03098.hp1
HG03130.hp1
HG03139.hp1
HG03209.hp1
HG03225.hp1
HG03471.hp1
HG03486.hp1
HG03486.hp2
HG03491.hp2
HG03516.hp1
HG03579.hp1
NA18522.hp1
NA18612.hp1
NA18943.hp1
NA18944.hp1
NA18966.hp1
NA18986.hp1
NA18990.hp1
NA19000.hp1
NA19004.hp1
NA19012.hp1
NA19043.hp1
NA19055.hp1
NA19070.hp1
NA19076.hp1
NA19086.hp1
NA19091.hp1
NA19240.hp1
NA19240.hp2
NA20300.hp2
 intron_variant MODIFIER c.741+640delT
c.741+640delT
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 7/21 INFO_REALIGN_3_PRIME chrX 21498483
chrX:21498530 A
A
 G
G
 2 a0001c0001t0002g0049
a0001c0001t0008g0135
a0001c0001t0002g0049
a0001c0001t0008g0135
 2 NA19000.hp1
NA19004.hp1
NA19000.hp1
NA19004.hp1
 intron_variant MODIFIER c.741+684A>G
c.741+684A>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 7/21 chrX 21498530
chrX:21498815 A
A
 AT
AT
 11 a0001c0001t0001g0158
a0001c0001t0006g0155
a0001c0001t0006g0157
others(8): Show 
a0001c0001t0001g0158
a0001c0001t0006g0155
a0001c0001t0006g0157
a0001c0001t0006g0159
a0001c0001t0006g0161
a0001c0001t0010g0152
a0001c0001t0010g0153
a0001c0001t0010g0162
a0001c0001t0024g0156
a0001c0001t0043g0007
a0003c0004t0006g0154
 11 HG01884.hp1
HG02886.hp1
HG02922.hp2
others(8): Show 
HG01884.hp1
HG02886.hp1
HG02922.hp2
HG02976.hp1
HG03130.hp1
HG03209.hp1
HG03225.hp1
HG03491.hp2
HG03516.hp1
NA19240.hp2
NA20300.hp2
 intron_variant MODIFIER c.741+979dupT
c.741+979dupT
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 7/21 INFO_REALIGN_3_PRIME chrX 21498815
chrX:21499112 C
C
 T
T
 1 a0002c0005t0003g0030
a0002c0005t0003g0030
 1 HG02886.hp2
HG02886.hp2
 intron_variant MODIFIER c.741+1266C>T
c.741+1266C>T
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 7/21 chrX 21499112
chrX:21499173 A
A
 C
C
 1 a0001c0001t0002g0019
a0001c0001t0002g0019
 1 HG01106.hp1
HG01106.hp1
 intron_variant MODIFIER c.741+1327A>C
c.741+1327A>C
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 7/21 chrX 21499173
chrX:21499902 A
A
 G
G
 1 a0001c0001t0005g0079
a0001c0001t0005g0079
 1 NA18961.hp1
NA18961.hp1
 intron_variant MODIFIER c.742-1618A>G
c.742-1618A>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 7/21 chrX 21499902
chrX:21499922 A
A
 G
G
 1 a0001c0001t0003g0061
a0001c0001t0003g0061
 1 NA18970.hp1
NA18970.hp1
 intron_variant MODIFIER c.742-1598A>G
c.742-1598A>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 7/21 chrX 21499922
chrX:21500554 A
A
 G
G
 13 a0001c0001t0001g0158
a0001c0001t0006g0155
a0001c0001t0006g0157
others(10): Show 
a0001c0001t0001g0158
a0001c0001t0006g0155
a0001c0001t0006g0157
a0001c0001t0006g0159
a0001c0001t0006g0160
a0001c0001t0006g0161
a0001c0001t0010g0152
a0001c0001t0010g0153
a0001c0001t0010g0162
a0001c0001t0017g0018
a0001c0001t0024g0156
a0001c0007t0036g0026
a0003c0004t0006g0154
 13 HG01071.hp2
HG01081.hp1
HG01884.hp1
others(10): Show 
HG01071.hp2
HG01081.hp1
HG01884.hp1
HG02615.hp2
HG02886.hp1
HG02922.hp2
HG02976.hp1
HG03130.hp1
HG03209.hp1
HG03225.hp1
HG03516.hp1
NA19240.hp2
NA20300.hp2
 intron_variant MODIFIER c.742-966A>G
c.742-966A>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 7/21 chrX 21500554
chrX:21500614 A
A
 T
T
 13 a0001c0001t0001g0158
a0001c0001t0003g0151
a0001c0001t0006g0155
others(10): Show 
a0001c0001t0001g0158
a0001c0001t0003g0151
a0001c0001t0006g0155
a0001c0001t0006g0157
a0001c0001t0006g0159
a0001c0001t0006g0160
a0001c0001t0006g0161
a0001c0001t0010g0152
a0001c0001t0010g0153
a0001c0001t0010g0162
a0001c0001t0017g0018
a0001c0001t0024g0156
a0003c0004t0006g0154
 13 HG01071.hp2
HG01081.hp2
HG01884.hp1
others(10): Show 
HG01071.hp2
HG01081.hp2
HG01884.hp1
HG02615.hp2
HG02886.hp1
HG02922.hp2
HG02976.hp1
HG03130.hp1
HG03209.hp1
HG03225.hp1
HG03516.hp1
NA19240.hp2
NA20300.hp2
 intron_variant MODIFIER c.742-906A>T
c.742-906A>T
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 7/21 chrX 21500614
chrX:21501150 A
A
 G
G
 1 a0001c0001t0002g0019
a0001c0001t0002g0019
 1 HG01106.hp1
HG01106.hp1
 intron_variant MODIFIER c.742-370A>G
c.742-370A>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 7/21 chrX 21501150
chrX:21501205 T
T
 C
C
 13 a0001c0001t0001g0158
a0001c0001t0003g0151
a0001c0001t0006g0155
others(10): Show 
a0001c0001t0001g0158
a0001c0001t0003g0151
a0001c0001t0006g0155
a0001c0001t0006g0157
a0001c0001t0006g0159
a0001c0001t0006g0160
a0001c0001t0006g0161
a0001c0001t0010g0152
a0001c0001t0010g0153
a0001c0001t0010g0162
a0001c0001t0017g0018
a0001c0001t0024g0156
a0003c0004t0006g0154
 13 HG01071.hp2
HG01081.hp2
HG01884.hp1
others(10): Show 
HG01071.hp2
HG01081.hp2
HG01884.hp1
HG02615.hp2
HG02886.hp1
HG02922.hp2
HG02976.hp1
HG03130.hp1
HG03209.hp1
HG03225.hp1
HG03516.hp1
NA19240.hp2
NA20300.hp2
 intron_variant MODIFIER c.742-315T>C
c.742-315T>C
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 7/21 chrX 21501205
chrX:21501220 C
C
 T
T
 1 a0002c0005t0003g0030
a0002c0005t0003g0030
 1 HG02886.hp2
HG02886.hp2
 intron_variant MODIFIER c.742-300C>T
c.742-300C>T
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 7/21 chrX 21501220
chrX:21501314 TTTTC
TTTTC
 T
T
 3 a0001c0001t0004g0132
a0001c0001t0016g0032
a0001c0001t0018g0123
a0001c0001t0004g0132
a0001c0001t0016g0032
a0001c0001t0018g0123
 3 HG01358.hp1
HG02602.hp1
NA20752.hp1
HG01358.hp1
HG02602.hp1
NA20752.hp1
 intron_variant MODIFIER c.742-200_742-197del
others(4): Show 
c.742-200_742-197delTTCT
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 7/21 INFO_REALIGN_3_PRIME chrX 21501314
chrX:21501326 GTTTA
GTTTA
 G
G
 3 a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
 3 HG02615.hp1
HG02965.hp1
HG03471.hp1
HG02615.hp1
HG02965.hp1
HG03471.hp1
 intron_variant MODIFIER c.742-189_742-186del
others(4): Show 
c.742-189_742-186delTTTA
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 7/21 INFO_REALIGN_3_PRIME chrX 21501326
chrX:21501407 T
T
 G
G
 12 a0001c0001t0001g0158
a0001c0001t0003g0151
a0001c0001t0006g0155
others(9): Show 
a0001c0001t0001g0158
a0001c0001t0003g0151
a0001c0001t0006g0155
a0001c0001t0006g0157
a0001c0001t0006g0159
a0001c0001t0006g0160
a0001c0001t0006g0161
a0001c0001t0010g0152
a0001c0001t0010g0153
a0001c0001t0010g0162
a0001c0001t0024g0156
a0003c0004t0006g0154
 12 HG01081.hp2
HG01884.hp1
HG02615.hp2
others(9): Show 
HG01081.hp2
HG01884.hp1
HG02615.hp2
HG02886.hp1
HG02922.hp2
HG02976.hp1
HG03130.hp1
HG03209.hp1
HG03225.hp1
HG03516.hp1
NA19240.hp2
NA20300.hp2
 intron_variant MODIFIER c.742-113T>G
c.742-113T>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 7/21 chrX 21501407
chrX:21501883 A
A
 G
G
 1 a0001c0001t0042g0008
a0001c0001t0042g0008
 1 HG02647.hp1
HG02647.hp1
 intron_variant MODIFIER c.810+295A>G
c.810+295A>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 8/21 chrX 21501883
chrX:21502002 A
A
 T
T
 5 a0001c0001t0001g0080
a0001c0001t0001g0089
a0001c0001t0001g0090
others(2): Show 
a0001c0001t0001g0080
a0001c0001t0001g0089
a0001c0001t0001g0090
a0001c0001t0001g0128
a0001c0001t0001g0145
 5 HG01255.hp1
NA19005.hp1
NA19066.hp1
others(2): Show 
HG01255.hp1
NA19005.hp1
NA19066.hp1
NA19082.hp1
NA19088.hp1
 intron_variant MODIFIER c.810+414A>T
c.810+414A>T
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 8/21 chrX 21502002
chrX:21502286 T
T
 G
G
 1 a0001c0001t0022g0033
a0001c0001t0022g0033
 1 HG02055.hp1
HG02055.hp1
 intron_variant MODIFIER c.810+698T>G
c.810+698T>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 8/21 chrX 21502286
chrX:21502378 A
A
 G
G
 4 a0001c0001t0003g0151
a0001c0003t0014g0147
a0001c0003t0014g0149
others(1): Show 
a0001c0001t0003g0151
a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
 4 HG01081.hp2
HG02615.hp1
HG02965.hp1
others(1): Show 
HG01081.hp2
HG02615.hp1
HG02965.hp1
HG03471.hp1
 intron_variant MODIFIER c.810+790A>G
c.810+790A>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 8/21 chrX 21502378
chrX:21502644 C
C
 T
T
 3 a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
 3 HG02615.hp1
HG02965.hp1
HG03471.hp1
HG02615.hp1
HG02965.hp1
HG03471.hp1
 intron_variant MODIFIER c.810+1056C>T
c.810+1056C>T
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 8/21 chrX 21502644
chrX:21503554 A
A
 G
G
 1 a0001c0001t0042g0008
a0001c0001t0042g0008
 1 HG02647.hp1
HG02647.hp1
 intron_variant MODIFIER c.810+1966A>G
c.810+1966A>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 8/21 chrX 21503554
chrX:21504658 G
G
 C
C
 1 a0001c0001t0007g0140
a0001c0001t0007g0140
 1 HG02922.hp1
HG02922.hp1
 intron_variant MODIFIER c.810+3070G>C
c.810+3070G>C
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 8/21 chrX 21504658
chrX:21504785 T
T
 C
C
 1 a0001c0001t0003g0151
a0001c0001t0003g0151
 1 HG01081.hp2
HG01081.hp2
 intron_variant MODIFIER c.810+3197T>C
c.810+3197T>C
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 8/21 chrX 21504785
chrX:21505640 C
C
 T
T
 1 a0001c0001t0001g0073
a0001c0001t0001g0073
 1 HG01515.hp1
HG01515.hp1
 intron_variant MODIFIER c.810+4052C>T
c.810+4052C>T
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 8/21 chrX 21505640
chrX:21505666 C
C
 A
A
 1 a0001c0001t0019g0014
a0001c0001t0019g0014
 1 HG01884.hp2
HG01884.hp2
 intron_variant MODIFIER c.810+4078C>A
c.810+4078C>A
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 8/21 chrX 21505666
chrX:21506222 G
G
 A
A
 1 a0001c0001t0001g0089
a0001c0001t0001g0089
 1 NA19088.hp1
NA19088.hp1
 intron_variant MODIFIER c.810+4634G>A
c.810+4634G>A
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 8/21 chrX 21506222
chrX:21506279 A
A
 G
G
 1 a0001c0001t0004g0020
a0001c0001t0004g0020
 1 HG01192.hp1
HG01192.hp1
 intron_variant MODIFIER c.810+4691A>G
c.810+4691A>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 8/21 chrX 21506279
chrX:21506439 T
T
 C
C
 1 a0001c0001t0002g0047
a0001c0001t0002g0047
 1 NA19076.hp1
NA19076.hp1
 intron_variant MODIFIER c.810+4851T>C
c.810+4851T>C
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 8/21 chrX 21506439
chrX:21506987 G
G
 GT
GT
 15 a0001c0001t0001g0158
a0001c0001t0003g0151
a0001c0001t0006g0155
others(12): Show 
a0001c0001t0001g0158
a0001c0001t0003g0151
a0001c0001t0006g0155
a0001c0001t0006g0157
a0001c0001t0006g0159
a0001c0001t0006g0160
a0001c0001t0006g0161
a0001c0001t0007g0140
a0001c0001t0010g0152
a0001c0001t0010g0153
a0001c0001t0010g0162
a0001c0001t0017g0018
a0001c0001t0020g0141
a0001c0001t0024g0156
a0003c0004t0006g0154
 15 HG01071.hp2
HG01081.hp2
HG01243.hp1
others(12): Show 
HG01071.hp2
HG01081.hp2
HG01243.hp1
HG01884.hp1
HG02615.hp2
HG02886.hp1
HG02922.hp1
HG02922.hp2
HG02976.hp1
HG03130.hp1
HG03209.hp1
HG03225.hp1
HG03516.hp1
NA19240.hp2
NA20300.hp2
 intron_variant MODIFIER c.810+5411dupT
c.810+5411dupT
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 8/21 INFO_REALIGN_3_PRIME chrX 21506987
chrX:21507210 C
C
 G
G
 1 a0001c0001t0015g0038
a0001c0001t0015g0038
 1 HG03688.hp1
HG03688.hp1
 intron_variant MODIFIER c.810+5622C>G
c.810+5622C>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 8/21 chrX 21507210
chrX:21507297 C
C
 T
T
 4 a0001c0001t0003g0015
a0001c0001t0011g0016
a0001c0001t0011g0017
others(1): Show 
a0001c0001t0003g0015
a0001c0001t0011g0016
a0001c0001t0011g0017
a0001c0001t0011g0138
 4 HG02717.hp1
HG03041.hp1
HG03579.hp1
others(1): Show 
HG02717.hp1
HG03041.hp1
HG03579.hp1
NA18522.hp1
 intron_variant MODIFIER c.810+5709C>T
c.810+5709C>T
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 8/21 chrX 21507297
chrX:21507403 A
A
 T
T
 16 a0001c0001t0001g0158
a0001c0001t0003g0151
a0001c0001t0006g0155
others(13): Show 
a0001c0001t0001g0158
a0001c0001t0003g0151
a0001c0001t0006g0155
a0001c0001t0006g0157
a0001c0001t0006g0159
a0001c0001t0006g0160
a0001c0001t0006g0161
a0001c0001t0010g0152
a0001c0001t0010g0153
a0001c0001t0010g0162
a0001c0001t0017g0018
a0001c0001t0024g0156
a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
a0003c0004t0006g0154
 16 HG01071.hp2
HG01081.hp2
HG01884.hp1
others(13): Show 
HG01071.hp2
HG01081.hp2
HG01884.hp1
HG02615.hp1
HG02615.hp2
HG02886.hp1
HG02922.hp2
HG02965.hp1
HG02976.hp1
HG03130.hp1
HG03209.hp1
HG03225.hp1
HG03471.hp1
HG03516.hp1
NA19240.hp2
NA20300.hp2
 intron_variant MODIFIER c.810+5815A>T
c.810+5815A>T
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 8/21 chrX 21507403
chrX:21507452 G
G
 A
A
 3 a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
 3 HG02615.hp1
HG02965.hp1
HG03471.hp1
HG02615.hp1
HG02965.hp1
HG03471.hp1
 intron_variant MODIFIER c.810+5864G>A
c.810+5864G>A
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 8/21 chrX 21507452
chrX:21507562 A
A
 G
G
 1 a0001c0001t0001g0051
a0001c0001t0001g0051
 1 HG01074.hp1
HG01074.hp1
 intron_variant MODIFIER c.810+5974A>G
c.810+5974A>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 8/21 chrX 21507562
chrX:21507800 G
G
 A
A
 16 a0001c0001t0001g0158
a0001c0001t0003g0151
a0001c0001t0006g0155
others(13): Show 
a0001c0001t0001g0158
a0001c0001t0003g0151
a0001c0001t0006g0155
a0001c0001t0006g0157
a0001c0001t0006g0159
a0001c0001t0006g0160
a0001c0001t0006g0161
a0001c0001t0010g0152
a0001c0001t0010g0153
a0001c0001t0010g0162
a0001c0001t0017g0018
a0001c0001t0024g0156
a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
a0003c0004t0006g0154
 16 HG01071.hp2
HG01081.hp2
HG01884.hp1
others(13): Show 
HG01071.hp2
HG01081.hp2
HG01884.hp1
HG02615.hp1
HG02615.hp2
HG02886.hp1
HG02922.hp2
HG02965.hp1
HG02976.hp1
HG03130.hp1
HG03209.hp1
HG03225.hp1
HG03471.hp1
HG03516.hp1
NA19240.hp2
NA20300.hp2
 intron_variant MODIFIER c.810+6212G>A
c.810+6212G>A
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 8/21 chrX 21507800
chrX:21507832 A
A
 G
G
 1 a0001c0001t0042g0008
a0001c0001t0042g0008
 1 HG02647.hp1
HG02647.hp1
 intron_variant MODIFIER c.810+6244A>G
c.810+6244A>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 8/21 chrX 21507832
chrX:21508156 C
C
 T
T
 1 a0001c0001t0004g0064
a0001c0001t0004g0064
 1 HG00738.hp1
HG00738.hp1
 intron_variant MODIFIER c.810+6568C>T
c.810+6568C>T
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 8/21 chrX 21508156
chrX:21509026 T
T
 C
C
 2 a0001c0001t0004g0132
a0001c0001t0016g0032
a0001c0001t0004g0132
a0001c0001t0016g0032
 2 HG02602.hp1
NA20752.hp1
HG02602.hp1
NA20752.hp1
 intron_variant MODIFIER c.810+7438T>C
c.810+7438T>C
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 8/21 chrX 21509026
chrX:21509052 G
G
 A
A
 1 a0001c0001t0001g0131
a0001c0001t0001g0131
 1 NA18959.hp1
NA18959.hp1
 intron_variant MODIFIER c.811-7433G>A
c.811-7433G>A
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 8/21 chrX 21509052
chrX:21509276 C
C
 G
G
 4 a0001c0001t0003g0015
a0001c0001t0011g0016
a0001c0001t0011g0017
others(1): Show 
a0001c0001t0003g0015
a0001c0001t0011g0016
a0001c0001t0011g0017
a0001c0001t0011g0138
 4 HG02717.hp1
HG03041.hp1
HG03579.hp1
others(1): Show 
HG02717.hp1
HG03041.hp1
HG03579.hp1
NA18522.hp1
 intron_variant MODIFIER c.811-7209C>G
c.811-7209C>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 8/21 chrX 21509276
chrX:21509324 C
C
 A
A
 2 a0001c0001t0002g0112
a0001c0001t0002g0113
a0001c0001t0002g0112
a0001c0001t0002g0113
 2 HG00735.hp1
HG01433.hp1
HG00735.hp1
HG01433.hp1
 intron_variant MODIFIER c.811-7161C>A
c.811-7161C>A
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 8/21 chrX 21509324
chrX:21509495 T
T
 C
C
 1 a0001c0001t0012g0142
a0001c0001t0012g0142
 1 HG03139.hp1
HG03139.hp1
 intron_variant MODIFIER c.811-6990T>C
c.811-6990T>C
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 8/21 chrX 21509495
chrX:21509581 A
A
 AC
AC
 1 a0001c0001t0042g0008
a0001c0001t0042g0008
 1 HG02647.hp1
HG02647.hp1
 intron_variant MODIFIER c.811-6903dupC
c.811-6903dupC
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 8/21 INFO_REALIGN_3_PRIME chrX 21509581
chrX:21510357 T
T
 TA
TA
 7 a0001c0001t0002g0028
a0001c0001t0003g0029
a0001c0001t0017g0146
others(4): Show 
a0001c0001t0002g0028
a0001c0001t0003g0029
a0001c0001t0017g0146
a0001c0001t0038g0150
a0001c0001t0040g0027
a0001c0007t0036g0026
a0002c0005t0003g0030
 7 HG01081.hp1
HG01109.hp1
HG02258.hp1
others(4): Show 
HG01081.hp1
HG01109.hp1
HG02258.hp1
HG02886.hp2
HG02895.hp1
NA19043.hp1
NA19240.hp1
 intron_variant MODIFIER c.811-6119dupA
c.811-6119dupA
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 8/21 INFO_REALIGN_3_PRIME chrX 21510357
chrX:21511027 A
A
 C
C
 3 a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
 3 HG02615.hp1
HG02965.hp1
HG03471.hp1
HG02615.hp1
HG02965.hp1
HG03471.hp1
 intron_variant MODIFIER c.811-5458A>C
c.811-5458A>C
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 8/21 chrX 21511027
chrX:21511099 C
C
 T
T
 3 a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
 3 HG02615.hp1
HG02965.hp1
HG03471.hp1
HG02615.hp1
HG02965.hp1
HG03471.hp1
 intron_variant MODIFIER c.811-5386C>T
c.811-5386C>T
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 8/21 chrX 21511099
chrX:21511100 A
A
 G
G
 4 a0001c0001t0042g0008
a0001c0003t0014g0147
a0001c0003t0014g0149
others(1): Show 
a0001c0001t0042g0008
a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
 4 HG02615.hp1
HG02647.hp1
HG02965.hp1
others(1): Show 
HG02615.hp1
HG02647.hp1
HG02965.hp1
HG03471.hp1
 intron_variant MODIFIER c.811-5385A>G
c.811-5385A>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 8/21 chrX 21511100
chrX:21511772 C
C
 G
G
 2 a0001c0001t0022g0033
a0001c0001t0027g0034
a0001c0001t0022g0033
a0001c0001t0027g0034
 2 HG02055.hp1
HG02486.hp1
HG02055.hp1
HG02486.hp1
 intron_variant MODIFIER c.811-4713C>G
c.811-4713C>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 8/21 chrX 21511772
chrX:21511993 T
T
 C
C
 1 a0002c0005t0003g0030
a0002c0005t0003g0030
 1 HG02886.hp2
HG02886.hp2
 intron_variant MODIFIER c.811-4492T>C
c.811-4492T>C
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 8/21 chrX 21511993
chrX:21512191 A
A
 G
G
 1 a0001c0001t0001g0075
a0001c0001t0001g0075
 1 NA18948.hp1
NA18948.hp1
 intron_variant MODIFIER c.811-4294A>G
c.811-4294A>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 8/21 chrX 21512191
chrX:21512410 A
A
 T
T
 1 a0001c0001t0005g0099
a0001c0001t0005g0099
 1 NA18747.hp1
NA18747.hp1
 intron_variant MODIFIER c.811-4075A>T
c.811-4075A>T
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 8/21 chrX 21512410
chrX:21512441 T
T
 C
C
 4 a0001c0001t0007g0140
a0001c0003t0014g0147
a0001c0003t0014g0149
others(1): Show 
a0001c0001t0007g0140
a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
 4 HG02615.hp1
HG02922.hp1
HG02965.hp1
others(1): Show 
HG02615.hp1
HG02922.hp1
HG02965.hp1
HG03471.hp1
 intron_variant MODIFIER c.811-4044T>C
c.811-4044T>C
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 8/21 chrX 21512441
chrX:21512754 T
T
 TTTTTG
TTTTTG
 15 a0001c0001t0003g0015
a0001c0001t0003g0024
a0001c0001t0009g0010
others(12): Show 
a0001c0001t0003g0015
a0001c0001t0003g0024
a0001c0001t0009g0010
a0001c0001t0009g0011
a0001c0001t0009g0012
a0001c0001t0009g0013
a0001c0001t0011g0016
a0001c0001t0011g0017
a0001c0001t0011g0138
a0001c0001t0012g0025
a0001c0001t0017g0018
a0001c0001t0019g0014
a0001c0001t0020g0141
a0001c0001t0041g0009
a0001c0001t0042g0008
 15 HG01071.hp2
HG01243.hp1
HG01884.hp2
others(12): Show 
HG01071.hp2
HG01243.hp1
HG01884.hp2
HG02280.hp1
HG02280.hp2
HG02572.hp1
HG02647.hp1
HG02717.hp1
HG02809.hp1
HG03041.hp1
HG03098.hp1
HG03486.hp1
HG03486.hp2
HG03579.hp1
NA18522.hp1
 intron_variant MODIFIER c.811-3711_811-3707d
others(7): Show 
c.811-3711_811-3707dupGTTTT
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 8/21 INFO_REALIGN_3_PRIME chrX 21512754
chrX:21513051 T
T
 TA
TA
 1 a0001c0001t0001g0035
a0001c0001t0001g0035
 1 HG02056.hp1
HG02056.hp1
 intron_variant MODIFIER c.811-3433dupA
c.811-3433dupA
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 8/21 INFO_REALIGN_3_PRIME chrX 21513051
chrX:21513109 G
G
 A
A
 3 a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
 3 HG02615.hp1
HG02965.hp1
HG03471.hp1
HG02615.hp1
HG02965.hp1
HG03471.hp1
 intron_variant MODIFIER c.811-3376G>A
c.811-3376G>A
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 8/21 chrX 21513109
chrX:21513113 A
A
 T
T
 2 a0001c0001t0009g0011
a0001c0001t0009g0012
a0001c0001t0009g0011
a0001c0001t0009g0012
 2 HG02572.hp1
HG02809.hp1
HG02572.hp1
HG02809.hp1
 intron_variant MODIFIER c.811-3372A>T
c.811-3372A>T
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 8/21 chrX 21513113
chrX:21514403 A
A
 G
G
 1 a0001c0001t0002g0019
a0001c0001t0002g0019
 1 HG01106.hp1
HG01106.hp1
 intron_variant MODIFIER c.811-2082A>G
c.811-2082A>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 8/21 chrX 21514403
chrX:21514475 T
T
 C
C
 2 a0001c0001t0022g0033
a0001c0001t0027g0034
a0001c0001t0022g0033
a0001c0001t0027g0034
 2 HG02055.hp1
HG02486.hp1
HG02055.hp1
HG02486.hp1
 intron_variant MODIFIER c.811-2010T>C
c.811-2010T>C
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 8/21 chrX 21514475
chrX:21514636 T
T
 C
C
 1 a0001c0001t0001g0060
a0001c0001t0001g0060
 1 HG03041.hp2
HG03041.hp2
 intron_variant MODIFIER c.811-1849T>C
c.811-1849T>C
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 8/21 chrX 21514636
chrX:21514682 G
G
 A
A
 1 a0001c0001t0042g0008
a0001c0001t0042g0008
 1 HG02647.hp1
HG02647.hp1
 intron_variant MODIFIER c.811-1803G>A
c.811-1803G>A
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 8/21 chrX 21514682
chrX:21515041 T
T
 TA
TA
 5 a0001c0001t0004g0064
a0001c0001t0042g0008
a0001c0003t0014g0147
others(2): Show 
a0001c0001t0004g0064
a0001c0001t0042g0008
a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
 5 HG00738.hp1
HG02615.hp1
HG02647.hp1
others(2): Show 
HG00738.hp1
HG02615.hp1
HG02647.hp1
HG02965.hp1
HG03471.hp1
 intron_variant MODIFIER c.811-1433dupA
c.811-1433dupA
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 8/21 INFO_REALIGN_3_PRIME chrX 21515041
chrX:21515557 T
T
 A
A
 8 a0001c0001t0009g0013
a0001c0001t0010g0162
a0001c0001t0022g0033
others(5): Show 
a0001c0001t0009g0013
a0001c0001t0010g0162
a0001c0001t0022g0033
a0001c0001t0023g0006
a0001c0001t0027g0034
a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
 8 HG02055.hp1
HG02486.hp1
HG02615.hp1
others(5): Show 
HG02055.hp1
HG02486.hp1
HG02615.hp1
HG02965.hp1
HG03209.hp1
HG03471.hp1
HG03486.hp1
HG03654.hp1
 intron_variant MODIFIER c.811-928T>A
c.811-928T>A
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 8/21 chrX 21515557
chrX:21515932 T
T
 G
G
 1 a0001c0001t0004g0129
a0001c0001t0004g0129
 1 HG00609.hp1
HG00609.hp1
 intron_variant MODIFIER c.811-553T>G
c.811-553T>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 8/21 chrX 21515932
chrX:21516037 G
G
 A
A
 3 a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
 3 HG02615.hp1
HG02965.hp1
HG03471.hp1
HG02615.hp1
HG02965.hp1
HG03471.hp1
 intron_variant MODIFIER c.811-448G>A
c.811-448G>A
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 8/21 chrX 21516037
chrX:21516049 C
C
 G
G
 2 a0001c0001t0002g0119
a0001c0001t0002g0122
a0001c0001t0002g0119
a0001c0001t0002g0122
 2 NA18966.hp1
NA19070.hp1
NA18966.hp1
NA19070.hp1
 intron_variant MODIFIER c.811-436C>G
c.811-436C>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 8/21 chrX 21516049
chrX:21516308 A
A
 G
G
 1 a0001c0001t0004g0056
a0001c0001t0004g0056
 1 HG00741.hp1
HG00741.hp1
 intron_variant MODIFIER c.811-177A>G
c.811-177A>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 8/21 chrX 21516308
chrX:21516391 A
A
 AC
AC
 22 a0001c0001t0001g0037
a0001c0001t0001g0048
a0001c0001t0001g0062
others(19): Show 
a0001c0001t0001g0037
a0001c0001t0001g0048
a0001c0001t0001g0062
a0001c0001t0001g0067
a0001c0001t0001g0068
a0001c0001t0001g0069
a0001c0001t0001g0071
a0001c0001t0001g0075
a0001c0001t0001g0076
a0001c0001t0001g0131
a0001c0001t0001g0134
a0001c0001t0003g0061
a0001c0001t0003g0133
a0001c0001t0003g0136
a0001c0001t0004g0064
a0001c0001t0005g0063
a0001c0001t0005g0072
a0001c0001t0021g0088
a0001c0001t0025g0130
a0001c0001t0031g0065
a0001c0001t0032g0163
a0001c0001t0033g0002
 22 HG00673.hp1
HG00738.hp1
HG02040.hp1
others(19): Show 
HG00673.hp1
HG00738.hp1
HG02040.hp1
HG02071.hp1
HG02135.hp1
NA18945.hp1
NA18948.hp1
NA18952.hp1
NA18953.hp1
NA18959.hp1
NA18962.hp1
NA18965.hp1
NA18970.hp1
NA18982.hp1
NA18988.hp1
NA18989.hp1
NA19006.hp1
NA19058.hp1
NA19060.hp1
NA19062.hp1
NA19063.hp1
NA19085.hp1
 intron_variant MODIFIER c.811-93dupC
c.811-93dupC
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 8/21 INFO_REALIGN_3_PRIME chrX 21516391
chrX:21516943 A
A
 G
G
 3 a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
 3 HG02615.hp1
HG02965.hp1
HG03471.hp1
HG02615.hp1
HG02965.hp1
HG03471.hp1
 intron_variant MODIFIER c.957+312A>G
c.957+312A>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 9/21 chrX 21516943
chrX:21516993 A
A
 G
G
 3 a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
 3 HG02615.hp1
HG02965.hp1
HG03471.hp1
HG02615.hp1
HG02965.hp1
HG03471.hp1
 intron_variant MODIFIER c.957+362A>G
c.957+362A>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 9/21 chrX 21516993
chrX:21516993 A
A
 T
T
 1 a0001c0001t0015g0038
a0001c0001t0015g0038
 1 HG03688.hp1
HG03688.hp1
 intron_variant MODIFIER c.957+362A>T
c.957+362A>T
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 9/21 chrX 21516993
chrX:21517724 T
T
 TA
TA
 1 a0001c0001t0042g0008
a0001c0001t0042g0008
 1 HG02647.hp1
HG02647.hp1
 intron_variant MODIFIER c.957+1102dupA
c.957+1102dupA
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 9/21 INFO_REALIGN_3_PRIME chrX 21517724
chrX:21517776 A
A
 G
G
 2 a0001c0001t0001g0093
a0001c0001t0018g0123
a0001c0001t0001g0093
a0001c0001t0018g0123
 2 HG01358.hp1
NA20805.hp1
HG01358.hp1
NA20805.hp1
 intron_variant MODIFIER c.957+1145A>G
c.957+1145A>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 9/21 chrX 21517776
chrX:21517851 A
A
 C
C
 1 a0001c0001t0042g0008
a0001c0001t0042g0008
 1 HG02647.hp1
HG02647.hp1
 intron_variant MODIFIER c.957+1220A>C
c.957+1220A>C
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 9/21 chrX 21517851
chrX:21518048 T
T
 C
C
 1 a0001c0001t0001g0058
a0001c0001t0001g0058
 1 HG02698.hp1
HG02698.hp1
 intron_variant MODIFIER c.957+1417T>C
c.957+1417T>C
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 9/21 chrX 21518048
chrX:21518196 TA
TA
 T
T
 1 a0001c0001t0002g0111
a0001c0001t0002g0111
 1 HG00741.hp2
HG00741.hp2
 intron_variant MODIFIER c.957+1566delA
c.957+1566delA
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 9/21 chrX 21518196
chrX:21518282 G
G
 A
A
 1 a0001c0001t0030g0086
a0001c0001t0030g0086
 1 HG04199.hp1
HG04199.hp1
 intron_variant MODIFIER c.957+1651G>A
c.957+1651G>A
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 9/21 chrX 21518282
chrX:21518339 C
C
 G
G
 12 a0001c0001t0001g0158
a0001c0001t0006g0155
a0001c0001t0006g0157
others(9): Show 
a0001c0001t0001g0158
a0001c0001t0006g0155
a0001c0001t0006g0157
a0001c0001t0006g0159
a0001c0001t0006g0160
a0001c0001t0006g0161
a0001c0001t0010g0152
a0001c0001t0010g0153
a0001c0001t0010g0162
a0001c0001t0017g0018
a0001c0001t0024g0156
a0003c0004t0006g0154
 12 HG01071.hp2
HG01884.hp1
HG02615.hp2
others(9): Show 
HG01071.hp2
HG01884.hp1
HG02615.hp2
HG02886.hp1
HG02922.hp2
HG02976.hp1
HG03130.hp1
HG03209.hp1
HG03225.hp1
HG03516.hp1
NA19240.hp2
NA20300.hp2
 intron_variant MODIFIER c.957+1708C>G
c.957+1708C>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 9/21 chrX 21518339
chrX:21518462 A
A
 G
G
 2 a0001c0001t0023g0006
a0001c0001t0043g0007
a0001c0001t0023g0006
a0001c0001t0043g0007
 2 HG03491.hp2
HG03654.hp1
HG03491.hp2
HG03654.hp1
 intron_variant MODIFIER c.957+1831A>G
c.957+1831A>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 9/21 chrX 21518462
chrX:21519228 C
C
 T
T
 1 a0001c0001t0002g0110
a0001c0001t0002g0110
 1 HG02074.hp1
HG02074.hp1
 intron_variant MODIFIER c.957+2597C>T
c.957+2597C>T
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 9/21 chrX 21519228
chrX:21519390 C
C
 T
T
 1 a0001c0001t0002g0046
a0001c0001t0002g0046
 1 HG02083.hp1
HG02083.hp1
 intron_variant MODIFIER c.957+2759C>T
c.957+2759C>T
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 9/21 chrX 21519390
chrX:21519926 A
A
 G
G
 1 a0001c0001t0042g0008
a0001c0001t0042g0008
 1 HG02647.hp1
HG02647.hp1
 intron_variant MODIFIER c.957+3295A>G
c.957+3295A>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 9/21 chrX 21519926
chrX:21520405 C
C
 T
T
 3 a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
 3 HG02615.hp1
HG02965.hp1
HG03471.hp1
HG02615.hp1
HG02965.hp1
HG03471.hp1
 intron_variant MODIFIER c.957+3774C>T
c.957+3774C>T
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 9/21 chrX 21520405
chrX:21520479 G
G
 GA
GA
 69 a0001c0001t0001g0158
a0001c0001t0002g0003
a0001c0001t0002g0004
others(66): Show 
a0001c0001t0001g0158
a0001c0001t0002g0003
a0001c0001t0002g0004
a0001c0001t0002g0019
a0001c0001t0002g0028
a0001c0001t0002g0046
a0001c0001t0002g0047
a0001c0001t0002g0049
a0001c0001t0002g0050
a0001c0001t0002g0110
a0001c0001t0002g0111
a0001c0001t0002g0112
a0001c0001t0002g0113
a0001c0001t0002g0114
a0001c0001t0002g0118
a0001c0001t0002g0119
a0001c0001t0002g0120
a0001c0001t0002g0121
a0001c0001t0002g0122
a0001c0001t0002g0125
a0001c0001t0002g0126
a0001c0001t0003g0015
a0001c0001t0003g0024
a0001c0001t0003g0029
a0001c0001t0003g0031
a0001c0001t0003g0151
a0001c0001t0006g0155
a0001c0001t0006g0157
a0001c0001t0006g0159
a0001c0001t0006g0160
a0001c0001t0006g0161
a0001c0001t0007g0140
a0001c0001t0008g0005
a0001c0001t0008g0124
a0001c0001t0008g0135
a0001c0001t0008g0143
a0001c0001t0009g0010
a0001c0001t0009g0011
a0001c0001t0009g0012
a0001c0001t0009g0013
a0001c0001t0010g0152
a0001c0001t0010g0153
a0001c0001t0010g0162
a0001c0001t0011g0016
a0001c0001t0011g0017
a0001c0001t0011g0138
a0001c0001t0012g0025
a0001c0001t0012g0045
a0001c0001t0012g0142
a0001c0001t0017g0018
a0001c0001t0017g0146
a0001c0001t0019g0014
a0001c0001t0020g0141
a0001c0001t0022g0033
a0001c0001t0023g0006
a0001c0001t0024g0156
a0001c0001t0027g0034
a0001c0001t0038g0150
a0001c0001t0039g0144
a0001c0001t0040g0027
a0001c0001t0041g0009
a0001c0001t0042g0008
a0001c0001t0043g0007
a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
a0001c0007t0036g0026
a0002c0005t0003g0030
a0003c0004t0006g0154
 69 HG00140.hp1
HG00621.hp1
HG00735.hp1
others(66): Show 
HG00140.hp1
HG00621.hp1
HG00735.hp1
HG00741.hp2
HG01069.hp1
HG01071.hp1
HG01071.hp2
HG01081.hp1
HG01081.hp2
HG01106.hp1
HG01109.hp1
HG01243.hp1
HG01433.hp1
HG01884.hp1
HG01884.hp2
HG02055.hp1
HG02074.hp1
HG02083.hp1
HG02145.hp1
HG02258.hp1
HG02280.hp1
HG02280.hp2
HG02486.hp1
HG02572.hp1
HG02615.hp1
HG02615.hp2
HG02647.hp1
HG02717.hp1
HG02809.hp1
HG02886.hp1
HG02886.hp2
HG02895.hp1
HG02922.hp1
HG02922.hp2
HG02965.hp1
HG02976.hp1
HG02976.hp2
HG03041.hp1
HG03098.hp1
HG03130.hp1
HG03139.hp1
HG03209.hp1
HG03225.hp1
HG03471.hp1
HG03486.hp1
HG03486.hp2
HG03491.hp2
HG03516.hp1
HG03579.hp1
HG03654.hp1
NA18522.hp1
NA18612.hp1
NA18943.hp1
NA18944.hp1
NA18966.hp1
NA18986.hp1
NA18990.hp1
NA19000.hp1
NA19004.hp1
NA19012.hp1
NA19043.hp1
NA19055.hp1
NA19070.hp1
NA19076.hp1
NA19086.hp1
NA19091.hp1
NA19240.hp1
NA19240.hp2
NA20300.hp2
 intron_variant MODIFIER c.957+3857dupA
c.957+3857dupA
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 9/21 INFO_REALIGN_3_PRIME chrX 21520479
chrX:21520689 C
C
 CT
CT
 3 a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
 3 HG02615.hp1
HG02965.hp1
HG03471.hp1
HG02615.hp1
HG02965.hp1
HG03471.hp1
 intron_variant MODIFIER c.957+4071dupT
c.957+4071dupT
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 9/21 INFO_REALIGN_3_PRIME chrX 21520689
chrX:21520692 T
T
 C
C
 6 a0001c0001t0009g0010
a0001c0001t0009g0011
a0001c0001t0009g0012
others(3): Show 
a0001c0001t0009g0010
a0001c0001t0009g0011
a0001c0001t0009g0012
a0001c0001t0009g0013
a0001c0001t0019g0014
a0001c0001t0041g0009
 6 HG01884.hp2
HG02280.hp2
HG02572.hp1
others(3): Show 
HG01884.hp2
HG02280.hp2
HG02572.hp1
HG02809.hp1
HG03098.hp1
HG03486.hp1
 intron_variant MODIFIER c.957+4061T>C
c.957+4061T>C
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 9/21 chrX 21520692
chrX:21520923 A
A
 G
G
 1 a0001c0001t0042g0008
a0001c0001t0042g0008
 1 HG02647.hp1
HG02647.hp1
 intron_variant MODIFIER c.957+4292A>G
c.957+4292A>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 9/21 chrX 21520923
chrX:21521353 A
A
 T
T
 1 a0001c0001t0042g0008
a0001c0001t0042g0008
 1 HG02647.hp1
HG02647.hp1
 intron_variant MODIFIER c.957+4722A>T
c.957+4722A>T
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 9/21 chrX 21521353
chrX:21521798 C
C
 T
T
 3 a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
 3 HG02615.hp1
HG02965.hp1
HG03471.hp1
HG02615.hp1
HG02965.hp1
HG03471.hp1
 intron_variant MODIFIER c.958-5069C>T
c.958-5069C>T
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 9/21 chrX 21521798
chrX:21522192 T
T
 C
C
 1 a0001c0001t0020g0141
a0001c0001t0020g0141
 1 HG01243.hp1
HG01243.hp1
 intron_variant MODIFIER c.958-4675T>C
c.958-4675T>C
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 9/21 chrX 21522192
chrX:21523741 G
G
 A
A
 3 a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
 3 HG02615.hp1
HG02965.hp1
HG03471.hp1
HG02615.hp1
HG02965.hp1
HG03471.hp1
 intron_variant MODIFIER c.958-3126G>A
c.958-3126G>A
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 9/21 chrX 21523741
chrX:21524269 A
A
 G
G
 1 a0001c0001t0002g0110
a0001c0001t0002g0110
 1 HG02074.hp1
HG02074.hp1
 intron_variant MODIFIER c.958-2598A>G
c.958-2598A>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 9/21 chrX 21524269
chrX:21524502 G
G
 T
T
 1 a0001c0001t0020g0141
a0001c0001t0020g0141
 1 HG01243.hp1
HG01243.hp1
 intron_variant MODIFIER c.958-2365G>T
c.958-2365G>T
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 9/21 chrX 21524502
chrX:21524718 C
C
 G
G
 1 a0001c0001t0043g0007
a0001c0001t0043g0007
 1 HG03491.hp2
HG03491.hp2
 intron_variant MODIFIER c.958-2149C>G
c.958-2149C>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 9/21 chrX 21524718
chrX:21525674 A
A
 G
G
 2 a0001c0001t0010g0162
a0001c0001t0042g0008
a0001c0001t0010g0162
a0001c0001t0042g0008
 2 HG02647.hp1
HG03209.hp1
HG02647.hp1
HG03209.hp1
 intron_variant MODIFIER c.958-1193A>G
c.958-1193A>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 9/21 chrX 21525674
chrX:21525849 A
A
 C
C
 1 a0001c0001t0003g0029
a0001c0001t0003g0029
 1 HG02895.hp1
HG02895.hp1
 intron_variant MODIFIER c.958-1018A>C
c.958-1018A>C
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 9/21 chrX 21525849
chrX:21526143 G
G
 GA
GA
 1 a0001c0001t0020g0141
a0001c0001t0020g0141
 1 HG01243.hp1
HG01243.hp1
 intron_variant MODIFIER c.958-720dupA
c.958-720dupA
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 9/21 INFO_REALIGN_3_PRIME chrX 21526143
chrX:21526206 T
T
 G
G
 3 a0001c0001t0001g0068
a0001c0001t0001g0069
a0001c0001t0033g0002
a0001c0001t0001g0068
a0001c0001t0001g0069
a0001c0001t0033g0002
 3 NA18989.hp1
NA19006.hp1
NA19085.hp1
NA18989.hp1
NA19006.hp1
NA19085.hp1
 intron_variant MODIFIER c.958-661T>G
c.958-661T>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 9/21 chrX 21526206
chrX:21526660 C
C
 T
T
 1 a0001c0001t0003g0029
a0001c0001t0003g0029
 1 HG02895.hp1
HG02895.hp1
 intron_variant MODIFIER c.958-207C>T
c.958-207C>T
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 9/21 chrX 21526660
chrX:21526766 T
T
 A
A
 1 a0001c0001t0002g0043
a0001c0001t0002g0043
 1 HG02809.hp2
HG02809.hp2
 intron_variant MODIFIER c.958-101T>A
c.958-101T>A
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 9/21 chrX 21526766
chrX:21526786 A
A
 ATTG
ATTG
 5 a0001c0001t0001g0102
a0001c0001t0001g0103
a0001c0001t0010g0162
others(2): Show 
a0001c0001t0001g0102
a0001c0001t0001g0103
a0001c0001t0010g0162
a0001c0001t0027g0034
a0001c0001t0042g0008
 5 HG02486.hp1
HG02647.hp1
HG03209.hp1
others(2): Show 
HG02486.hp1
HG02647.hp1
HG03209.hp1
HG03491.hp1
HG03492.hp1
 intron_variant MODIFIER c.958-51_958-49dupGT
others(1): Show 
c.958-51_958-49dupGTT
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 9/21 INFO_REALIGN_3_PRIME chrX 21526786
chrX:21526786 ATTG
ATTG
 A
A
 5 a0001c0001t0003g0031
a0001c0001t0017g0018
a0001c0003t0014g0147
others(2): Show 
a0001c0001t0003g0031
a0001c0001t0017g0018
a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
 5 HG01071.hp2
HG02615.hp1
HG02965.hp1
others(2): Show 
HG01071.hp2
HG02615.hp1
HG02965.hp1
HG02976.hp2
HG03471.hp1
 intron_variant MODIFIER c.958-51_958-49delGT
others(1): Show 
c.958-51_958-49delGTT
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 9/21 INFO_REALIGN_3_PRIME chrX 21526786
chrX:21526786 ATTGTTG
ATTGTTG
 A
A
 1 a0001c0001t0001g0001
a0001c0001t0001g0001
 1 NA19068.hp1
NA19068.hp1
 intron_variant MODIFIER c.958-54_958-49delGT
others(4): Show 
c.958-54_958-49delGTTGTT
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 9/21 INFO_REALIGN_3_PRIME chrX 21526786
chrX:21527227 ATC
ATC
 A
A
 2 a0001c0001t0022g0033
a0001c0001t0027g0034
a0001c0001t0022g0033
a0001c0001t0027g0034
 2 HG02055.hp1
HG02486.hp1
HG02055.hp1
HG02486.hp1
 intron_variant MODIFIER c.1091+230_1091+231d
others(4): Show 
c.1091+230_1091+231delTC
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 10/21 INFO_REALIGN_3_PRIME chrX 21527227
chrX:21527230 T
T
 C
C
 1 a0001c0001t0020g0141
a0001c0001t0020g0141
 1 HG01243.hp1
HG01243.hp1
 intron_variant MODIFIER c.1091+230T>C
c.1091+230T>C
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 10/21 chrX 21527230
chrX:21527370 A
A
 T
T
 5 a0001c0001t0009g0010
a0001c0001t0009g0011
a0001c0001t0009g0012
others(2): Show 
a0001c0001t0009g0010
a0001c0001t0009g0011
a0001c0001t0009g0012
a0001c0001t0009g0013
a0001c0001t0041g0009
 5 HG02280.hp2
HG02572.hp1
HG02809.hp1
others(2): Show 
HG02280.hp2
HG02572.hp1
HG02809.hp1
HG03098.hp1
HG03486.hp1
 intron_variant MODIFIER c.1091+370A>T
c.1091+370A>T
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 10/21 chrX 21527370
chrX:21527617 T
T
 C
C
 1 a0001c0001t0005g0063
a0001c0001t0005g0063
 1 NA18962.hp1
NA18962.hp1
 intron_variant MODIFIER c.1091+617T>C
c.1091+617T>C
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 10/21 chrX 21527617
chrX:21527624 A
A
 T
T
 4 a0001c0001t0042g0008
a0001c0003t0014g0147
a0001c0003t0014g0149
others(1): Show 
a0001c0001t0042g0008
a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
 4 HG02615.hp1
HG02647.hp1
HG02965.hp1
others(1): Show 
HG02615.hp1
HG02647.hp1
HG02965.hp1
HG03471.hp1
 intron_variant MODIFIER c.1091+624A>T
c.1091+624A>T
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 10/21 chrX 21527624
chrX:21527759 C
C
 CA
CA
 1 a0001c0001t0009g0013
a0001c0001t0009g0013
 1 HG03486.hp1
HG03486.hp1
 intron_variant MODIFIER c.1091+766dupA
c.1091+766dupA
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 10/21 INFO_REALIGN_3_PRIME chrX 21527759
chrX:21527806 ATAATT
ATAATT
 A
A
 21 a0001c0001t0002g0003
a0001c0001t0002g0046
a0001c0001t0002g0047
others(18): Show 
a0001c0001t0002g0003
a0001c0001t0002g0046
a0001c0001t0002g0047
a0001c0001t0002g0049
a0001c0001t0002g0050
a0001c0001t0002g0110
a0001c0001t0002g0111
a0001c0001t0002g0112
a0001c0001t0002g0113
a0001c0001t0002g0114
a0001c0001t0002g0118
a0001c0001t0002g0119
a0001c0001t0002g0120
a0001c0001t0002g0121
a0001c0001t0002g0122
a0001c0001t0002g0125
a0001c0001t0002g0126
a0001c0001t0008g0124
a0001c0001t0008g0135
a0001c0001t0008g0143
a0001c0001t0039g0144
 21 HG00140.hp1
HG00621.hp1
HG00735.hp1
others(18): Show 
HG00140.hp1
HG00621.hp1
HG00735.hp1
HG00741.hp2
HG01433.hp1
HG02074.hp1
HG02083.hp1
NA18612.hp1
NA18943.hp1
NA18944.hp1
NA18966.hp1
NA18986.hp1
NA18990.hp1
NA19000.hp1
NA19004.hp1
NA19012.hp1
NA19055.hp1
NA19070.hp1
NA19076.hp1
NA19086.hp1
NA19091.hp1
 intron_variant MODIFIER c.1091+810_1091+814d
others(7): Show 
c.1091+810_1091+814delTTTAA
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 10/21 INFO_REALIGN_3_PRIME chrX 21527806
chrX:21527852 C
C
 A
A
 1 a0001c0001t0011g0138
a0001c0001t0011g0138
 1 HG03041.hp1
HG03041.hp1
 intron_variant MODIFIER c.1091+852C>A
c.1091+852C>A
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 10/21 chrX 21527852
chrX:21527872 A
A
 G
G
 5 a0001c0001t0010g0162
a0001c0001t0042g0008
a0001c0003t0014g0147
others(2): Show 
a0001c0001t0010g0162
a0001c0001t0042g0008
a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
 5 HG02615.hp1
HG02647.hp1
HG02965.hp1
others(2): Show 
HG02615.hp1
HG02647.hp1
HG02965.hp1
HG03209.hp1
HG03471.hp1
 intron_variant MODIFIER c.1091+872A>G
c.1091+872A>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 10/21 chrX 21527872
chrX:21528002 A
A
 G
G
 2 a0001c0001t0003g0015
a0001c0001t0003g0031
a0001c0001t0003g0015
a0001c0001t0003g0031
 2 HG02717.hp1
HG02976.hp2
HG02717.hp1
HG02976.hp2
 intron_variant MODIFIER c.1091+1002A>G
c.1091+1002A>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 10/21 chrX 21528002
chrX:21528049 T
T
 C
C
 16 a0001c0001t0009g0010
a0001c0001t0009g0011
a0001c0001t0009g0012
others(13): Show 
a0001c0001t0009g0010
a0001c0001t0009g0011
a0001c0001t0009g0012
a0001c0001t0009g0013
a0001c0001t0010g0162
a0001c0001t0011g0016
a0001c0001t0011g0017
a0001c0001t0011g0138
a0001c0001t0017g0018
a0001c0001t0019g0014
a0001c0001t0020g0141
a0001c0001t0041g0009
a0001c0001t0042g0008
a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
 16 HG01071.hp2
HG01243.hp1
HG01884.hp2
others(13): Show 
HG01071.hp2
HG01243.hp1
HG01884.hp2
HG02280.hp2
HG02572.hp1
HG02615.hp1
HG02647.hp1
HG02809.hp1
HG02965.hp1
HG03041.hp1
HG03098.hp1
HG03209.hp1
HG03471.hp1
HG03486.hp1
HG03579.hp1
NA18522.hp1
 intron_variant MODIFIER c.1091+1049T>C
c.1091+1049T>C
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 10/21 chrX 21528049
chrX:21528259 A
A
 G
G
 1 a0001c0001t0004g0055
a0001c0001t0004g0055
 1 HG01258.hp1
HG01258.hp1
 intron_variant MODIFIER c.1091+1259A>G
c.1091+1259A>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 10/21 chrX 21528259
chrX:21528865 C
C
 G
G
 4 a0001c0001t0002g0115
a0001c0001t0003g0070
a0001c0001t0003g0101
others(1): Show 
a0001c0001t0002g0115
a0001c0001t0003g0070
a0001c0001t0003g0101
a0001c0001t0035g0054
 4 NA18967.hp1
NA18974.hp1
NA18994.hp1
others(1): Show 
NA18967.hp1
NA18974.hp1
NA18994.hp1
NA18995.hp1
 intron_variant MODIFIER c.1091+1865C>G
c.1091+1865C>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 10/21 chrX 21528865
chrX:21528937 T
T
 C
C
 3 a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
 3 HG02615.hp1
HG02965.hp1
HG03471.hp1
HG02615.hp1
HG02965.hp1
HG03471.hp1
 intron_variant MODIFIER c.1091+1937T>C
c.1091+1937T>C
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 10/21 chrX 21528937
chrX:21529017 T
T
 C
C
 6 a0001c0001t0002g0019
a0001c0001t0010g0162
a0001c0001t0042g0008
others(3): Show 
a0001c0001t0002g0019
a0001c0001t0010g0162
a0001c0001t0042g0008
a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
 6 HG01106.hp1
HG02615.hp1
HG02647.hp1
others(3): Show 
HG01106.hp1
HG02615.hp1
HG02647.hp1
HG02965.hp1
HG03209.hp1
HG03471.hp1
 intron_variant MODIFIER c.1091+2017T>C
c.1091+2017T>C
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 10/21 chrX 21529017
chrX:21529328 A
A
 G
G
 1 a0001c0001t0043g0007
a0001c0001t0043g0007
 1 HG03491.hp2
HG03491.hp2
 intron_variant MODIFIER c.1091+2328A>G
c.1091+2328A>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 10/21 chrX 21529328
chrX:21529405 A
A
 G
G
 2 a0001c0001t0010g0162
a0001c0001t0042g0008
a0001c0001t0010g0162
a0001c0001t0042g0008
 2 HG02647.hp1
HG03209.hp1
HG02647.hp1
HG03209.hp1
 intron_variant MODIFIER c.1091+2405A>G
c.1091+2405A>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 10/21 chrX 21529405
chrX:21529503 AG
AG
 A
A
 1 a0001c0002t0005g0106
a0001c0002t0005g0106
 1 NA19079.hp1
NA19079.hp1
 intron_variant MODIFIER c.1092-2352delG
c.1092-2352delG
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 10/21 chrX 21529503
chrX:21529659 A
A
 G
G
 1 a0001c0001t0001g0137
a0001c0001t0001g0137
 1 HG03490.hp1
HG03490.hp1
 intron_variant MODIFIER c.1092-2197A>G
c.1092-2197A>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 10/21 chrX 21529659
chrX:21530465 C
C
 G
G
 3 a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
 3 HG02615.hp1
HG02965.hp1
HG03471.hp1
HG02615.hp1
HG02965.hp1
HG03471.hp1
 intron_variant MODIFIER c.1092-1391C>G
c.1092-1391C>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 10/21 chrX 21530465
chrX:21531674 ACT
ACT
 A
A
 1 a0001c0001t0004g0117
a0001c0001t0004g0117
 1 HG02015.hp1
HG02015.hp1
 intron_variant MODIFIER c.1092-180_1092-179d
others(4): Show 
c.1092-180_1092-179delTC
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 10/21 INFO_REALIGN_3_PRIME chrX 21531674
chrX:21532213 TG
TG
 T
T
 1 a0001c0001t0002g0115
a0001c0001t0002g0115
 1 NA18974.hp1
NA18974.hp1
 intron_variant MODIFIER c.1303+148delG
c.1303+148delG
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 11/21 INFO_REALIGN_3_PRIME chrX 21532213
chrX:21532657 AC
AC
 A
A
 1 a0001c0001t0002g0115
a0001c0001t0002g0115
 1 NA18974.hp1
NA18974.hp1
 intron_variant MODIFIER c.1303+592delC
c.1303+592delC
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 11/21 INFO_REALIGN_3_PRIME chrX 21532657
chrX:21532887 A
A
 G
G
 4 a0001c0001t0001g0071
a0001c0001t0005g0063
a0001c0001t0005g0072
others(1): Show 
a0001c0001t0001g0071
a0001c0001t0005g0063
a0001c0001t0005g0072
a0001c0001t0032g0163
 4 NA18945.hp1
NA18962.hp1
NA19058.hp1
others(1): Show 
NA18945.hp1
NA18962.hp1
NA19058.hp1
NA19063.hp1
 intron_variant MODIFIER c.1303+820A>G
c.1303+820A>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 11/21 chrX 21532887
chrX:21533383 A
A
 G
G
 5 a0001c0001t0010g0162
a0001c0001t0042g0008
a0001c0003t0014g0147
others(2): Show 
a0001c0001t0010g0162
a0001c0001t0042g0008
a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
 5 HG02615.hp1
HG02647.hp1
HG02965.hp1
others(2): Show 
HG02615.hp1
HG02647.hp1
HG02965.hp1
HG03209.hp1
HG03471.hp1
 intron_variant MODIFIER c.1303+1316A>G
c.1303+1316A>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 11/21 chrX 21533383
chrX:21533463 A
A
 T
T
 1 a0001c0002t0007g0041
a0001c0002t0007g0041
 1 NA18977.hp1
NA18977.hp1
 intron_variant MODIFIER c.1303+1396A>T
c.1303+1396A>T
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 11/21 chrX 21533463
chrX:21533659 A
A
 G
G
 4 a0001c0001t0002g0111
a0001c0001t0002g0112
a0001c0001t0002g0113
others(1): Show 
a0001c0001t0002g0111
a0001c0001t0002g0112
a0001c0001t0002g0113
a0001c0001t0002g0114
 4 HG00140.hp1
HG00735.hp1
HG00741.hp2
others(1): Show 
HG00140.hp1
HG00735.hp1
HG00741.hp2
HG01433.hp1
 intron_variant MODIFIER c.1303+1592A>G
c.1303+1592A>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 11/21 chrX 21533659
chrX:21533824 A
A
 G
G
 1 a0001c0001t0012g0045
a0001c0001t0012g0045
 1 HG02145.hp1
HG02145.hp1
 intron_variant MODIFIER c.1303+1757A>G
c.1303+1757A>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 11/21 chrX 21533824
chrX:21534068 A
A
 G
G
 1 a0001c0001t0019g0014
a0001c0001t0019g0014
 1 HG01884.hp2
HG01884.hp2
 intron_variant MODIFIER c.1303+2001A>G
c.1303+2001A>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 11/21 chrX 21534068
chrX:21534117 G
G
 GT
GT
 2 a0001c0001t0010g0162
a0001c0001t0042g0008
a0001c0001t0010g0162
a0001c0001t0042g0008
 2 HG02647.hp1
HG03209.hp1
HG02647.hp1
HG03209.hp1
 intron_variant MODIFIER c.1303+2051dupT
c.1303+2051dupT
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 11/21 INFO_REALIGN_3_PRIME chrX 21534117
chrX:21534123 A
A
 G
G
 14 a0001c0001t0003g0015
a0001c0001t0009g0010
a0001c0001t0009g0011
others(11): Show 
a0001c0001t0003g0015
a0001c0001t0009g0010
a0001c0001t0009g0011
a0001c0001t0009g0012
a0001c0001t0009g0013
a0001c0001t0011g0016
a0001c0001t0011g0017
a0001c0001t0011g0138
a0001c0001t0017g0018
a0001c0001t0019g0014
a0001c0001t0020g0141
a0001c0001t0023g0006
a0001c0001t0041g0009
a0001c0001t0043g0007
 14 HG01071.hp2
HG01243.hp1
HG01884.hp2
others(11): Show 
HG01071.hp2
HG01243.hp1
HG01884.hp2
HG02280.hp2
HG02572.hp1
HG02717.hp1
HG02809.hp1
HG03041.hp1
HG03098.hp1
HG03486.hp1
HG03491.hp2
HG03579.hp1
HG03654.hp1
NA18522.hp1
 intron_variant MODIFIER c.1303+2056A>G
c.1303+2056A>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 11/21 chrX 21534123
chrX:21534295 G
G
 A
A
 5 a0001c0001t0010g0162
a0001c0001t0042g0008
a0001c0003t0014g0147
others(2): Show 
a0001c0001t0010g0162
a0001c0001t0042g0008
a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
 5 HG02615.hp1
HG02647.hp1
HG02965.hp1
others(2): Show 
HG02615.hp1
HG02647.hp1
HG02965.hp1
HG03209.hp1
HG03471.hp1
 intron_variant MODIFIER c.1303+2228G>A
c.1303+2228G>A
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 11/21 chrX 21534295
chrX:21534295 G
G
 GAT
GAT
 2 a0001c0001t0001g0093
a0001c0001t0018g0123
a0001c0001t0001g0093
a0001c0001t0018g0123
 2 HG01358.hp1
NA20805.hp1
HG01358.hp1
NA20805.hp1
 intron_variant MODIFIER c.1303+2241_1303+224
others(6): Show 
c.1303+2241_1303+2242dupAT
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 11/21 INFO_REALIGN_3_PRIME chrX 21534295
chrX:21534410 T
T
 C
C
 1 a0001c0001t0012g0142
a0001c0001t0012g0142
 1 HG03139.hp1
HG03139.hp1
 intron_variant MODIFIER c.1303+2343T>C
c.1303+2343T>C
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 11/21 chrX 21534410
chrX:21534418 A
A
 G
G
 12 a0001c0001t0003g0015
a0001c0001t0009g0010
a0001c0001t0009g0011
others(9): Show 
a0001c0001t0003g0015
a0001c0001t0009g0010
a0001c0001t0009g0011
a0001c0001t0009g0012
a0001c0001t0009g0013
a0001c0001t0011g0016
a0001c0001t0011g0017
a0001c0001t0011g0138
a0001c0001t0017g0018
a0001c0001t0019g0014
a0001c0001t0020g0141
a0001c0001t0041g0009
 12 HG01071.hp2
HG01243.hp1
HG01884.hp2
others(9): Show 
HG01071.hp2
HG01243.hp1
HG01884.hp2
HG02280.hp2
HG02572.hp1
HG02717.hp1
HG02809.hp1
HG03041.hp1
HG03098.hp1
HG03486.hp1
HG03579.hp1
NA18522.hp1
 intron_variant MODIFIER c.1303+2351A>G
c.1303+2351A>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 11/21 chrX 21534418
chrX:21534734 T
T
 C
C
 1 a0001c0001t0012g0142
a0001c0001t0012g0142
 1 HG03139.hp1
HG03139.hp1
 intron_variant MODIFIER c.1303+2667T>C
c.1303+2667T>C
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 11/21 chrX 21534734
chrX:21534739 C
C
 T
T
 2 a0001c0001t0002g0112
a0001c0001t0002g0113
a0001c0001t0002g0112
a0001c0001t0002g0113
 2 HG00735.hp1
HG01433.hp1
HG00735.hp1
HG01433.hp1
 intron_variant MODIFIER c.1303+2672C>T
c.1303+2672C>T
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 11/21 chrX 21534739
chrX:21534966 C
C
 A
A
 1 a0001c0001t0001g0083
a0001c0001t0001g0083
 1 NA20300.hp1
NA20300.hp1
 intron_variant MODIFIER c.1303+2899C>A
c.1303+2899C>A
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 11/21 chrX 21534966
chrX:21535389 A
A
 AT
AT
 9 a0001c0001t0002g0028
a0001c0001t0003g0024
a0001c0001t0003g0029
others(6): Show 
a0001c0001t0002g0028
a0001c0001t0003g0024
a0001c0001t0003g0029
a0001c0001t0003g0151
a0001c0001t0010g0153
a0001c0001t0012g0025
a0001c0001t0017g0146
a0001c0001t0038g0150
a0001c0001t0040g0027
 9 HG01081.hp2
HG01109.hp1
HG02258.hp1
others(6): Show 
HG01081.hp2
HG01109.hp1
HG02258.hp1
HG02280.hp1
HG02895.hp1
HG03486.hp2
NA19043.hp1
NA19240.hp1
NA19240.hp2
 intron_variant MODIFIER c.1303+3330dupT
c.1303+3330dupT
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 11/21 INFO_REALIGN_3_PRIME chrX 21535389
chrX:21535514 A
A
 G
G
 3 a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
 3 HG02615.hp1
HG02965.hp1
HG03471.hp1
HG02615.hp1
HG02965.hp1
HG03471.hp1
 intron_variant MODIFIER c.1303+3447A>G
c.1303+3447A>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 11/21 chrX 21535514
chrX:21536116 A
A
 G
G
 2 a0001c0001t0002g0004
a0001c0001t0008g0005
a0001c0001t0002g0004
a0001c0001t0008g0005
 2 HG01069.hp1
HG01071.hp1
HG01069.hp1
HG01071.hp1
 intron_variant MODIFIER c.1303+4049A>G
c.1303+4049A>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 11/21 chrX 21536116
chrX:21536829 G
G
 GT
GT
 19 a0001c0001t0002g0115
a0001c0001t0003g0015
a0001c0001t0003g0070
others(16): Show 
a0001c0001t0002g0115
a0001c0001t0003g0015
a0001c0001t0003g0070
a0001c0001t0003g0101
a0001c0001t0008g0124
a0001c0001t0009g0010
a0001c0001t0009g0011
a0001c0001t0009g0012
a0001c0001t0009g0013
a0001c0001t0011g0016
a0001c0001t0011g0017
a0001c0001t0011g0138
a0001c0001t0017g0018
a0001c0001t0017g0146
a0001c0001t0019g0014
a0001c0001t0020g0141
a0001c0001t0035g0054
a0001c0001t0041g0009
a0001c0007t0036g0026
 19 HG01071.hp2
HG01081.hp1
HG01109.hp1
others(16): Show 
HG01071.hp2
HG01081.hp1
HG01109.hp1
HG01243.hp1
HG01884.hp2
HG02280.hp2
HG02572.hp1
HG02717.hp1
HG02809.hp1
HG03041.hp1
HG03098.hp1
HG03486.hp1
HG03579.hp1
NA18522.hp1
NA18967.hp1
NA18974.hp1
NA18994.hp1
NA18995.hp1
NA19012.hp1
 intron_variant MODIFIER c.1303+4776dupT
c.1303+4776dupT
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 11/21 INFO_REALIGN_3_PRIME chrX 21536829
chrX:21536829 G
G
 GTTT
GTTT
 3 a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
 3 HG02615.hp1
HG02965.hp1
HG03471.hp1
HG02615.hp1
HG02965.hp1
HG03471.hp1
 intron_variant MODIFIER c.1303+4774_1303+477
others(7): Show 
c.1303+4774_1303+4776dupTTT
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 11/21 INFO_REALIGN_3_PRIME chrX 21536829
chrX:21536829 GT
GT
 G
G
 3 a0001c0001t0001g0073
a0001c0002t0001g0107
a0001c0002t0001g0108
a0001c0001t0001g0073
a0001c0002t0001g0107
a0001c0002t0001g0108
 3 HG01515.hp1
NA18984.hp1
NA19056.hp1
HG01515.hp1
NA18984.hp1
NA19056.hp1
 intron_variant MODIFIER c.1303+4776delT
c.1303+4776delT
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 11/21 INFO_REALIGN_3_PRIME chrX 21536829
chrX:21537255 T
T
 C
C
 1 a0001c0001t0002g0118
a0001c0001t0002g0118
 1 NA19086.hp1
NA19086.hp1
 intron_variant MODIFIER c.1303+5188T>C
c.1303+5188T>C
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 11/21 chrX 21537255
chrX:21537399 TAA
TAA
 T
T
 2 a0001c0001t0003g0116
a0001c0001t0004g0117
a0001c0001t0003g0116
a0001c0001t0004g0117
 2 HG02015.hp1
HG03017.hp1
HG02015.hp1
HG03017.hp1
 intron_variant MODIFIER c.1303+5333_1303+533
others(6): Show 
c.1303+5333_1303+5334delAA
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 11/21 chrX 21537399
chrX:21537731 G
G
 A
A
 5 a0001c0001t0001g0071
a0001c0001t0002g0019
a0001c0001t0005g0063
others(2): Show 
a0001c0001t0001g0071
a0001c0001t0002g0019
a0001c0001t0005g0063
a0001c0001t0005g0072
a0001c0001t0032g0163
 5 HG01106.hp1
NA18945.hp1
NA18962.hp1
others(2): Show 
HG01106.hp1
NA18945.hp1
NA18962.hp1
NA19058.hp1
NA19063.hp1
 intron_variant MODIFIER c.1303+5664G>A
c.1303+5664G>A
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 11/21 chrX 21537731
chrX:21537786 G
G
 GT
GT
 3 a0001c0001t0001g0074
a0001c0001t0003g0044
a0001c0003t0026g0148
a0001c0001t0001g0074
a0001c0001t0003g0044
a0001c0003t0026g0148
 3 HG02965.hp1
HG03942.hp1
NA18983.hp1
HG02965.hp1
HG03942.hp1
NA18983.hp1
 intron_variant MODIFIER c.1303+5735dupT
c.1303+5735dupT
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 11/21 INFO_REALIGN_3_PRIME chrX 21537786
chrX:21537786 GT
GT
 G
G
 5 a0001c0001t0001g0096
a0001c0001t0002g0047
a0001c0001t0005g0095
others(2): Show 
a0001c0001t0001g0096
a0001c0001t0002g0047
a0001c0001t0005g0095
a0001c0001t0040g0027
a0001c0001t0042g0008
 5 HG02647.hp1
HG03710.hp1
NA18960.hp1
others(2): Show 
HG02647.hp1
HG03710.hp1
NA18960.hp1
NA19043.hp1
NA19076.hp1
 intron_variant MODIFIER c.1303+5735delT
c.1303+5735delT
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 11/21 INFO_REALIGN_3_PRIME chrX 21537786
chrX:21537793 T
T
 G
G
 1 a0001c0001t0001g0094
a0001c0001t0001g0094
 1 NA18971.hp1
NA18971.hp1
 intron_variant MODIFIER c.1303+5726T>G
c.1303+5726T>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 11/21 chrX 21537793
chrX:21537804 T
T
 G
G
 4 a0001c0001t0003g0015
a0001c0001t0011g0016
a0001c0001t0011g0017
others(1): Show 
a0001c0001t0003g0015
a0001c0001t0011g0016
a0001c0001t0011g0017
a0001c0001t0011g0138
 4 HG02717.hp1
HG03041.hp1
HG03579.hp1
others(1): Show 
HG02717.hp1
HG03041.hp1
HG03579.hp1
NA18522.hp1
 intron_variant MODIFIER c.1303+5737T>G
c.1303+5737T>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 11/21 chrX 21537804
chrX:21538124 A
A
 C
C
 3 a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
 3 HG02615.hp1
HG02965.hp1
HG03471.hp1
HG02615.hp1
HG02965.hp1
HG03471.hp1
 intron_variant MODIFIER c.1303+6057A>C
c.1303+6057A>C
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 11/21 chrX 21538124
chrX:21538229 T
T
 G
G
 1 a0001c0001t0012g0142
a0001c0001t0012g0142
 1 HG03139.hp1
HG03139.hp1
 intron_variant MODIFIER c.1303+6162T>G
c.1303+6162T>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 11/21 chrX 21538229
chrX:21539502 G
G
 GT
GT
 34 a0001c0001t0001g0158
a0001c0001t0003g0015
a0001c0001t0006g0155
others(31): Show 
a0001c0001t0001g0158
a0001c0001t0003g0015
a0001c0001t0006g0155
a0001c0001t0006g0157
a0001c0001t0006g0159
a0001c0001t0006g0160
a0001c0001t0006g0161
a0001c0001t0007g0140
a0001c0001t0009g0010
a0001c0001t0009g0011
a0001c0001t0009g0012
a0001c0001t0009g0013
a0001c0001t0010g0152
a0001c0001t0010g0162
a0001c0001t0011g0016
a0001c0001t0011g0017
a0001c0001t0011g0138
a0001c0001t0017g0018
a0001c0001t0019g0014
a0001c0001t0020g0141
a0001c0001t0022g0033
a0001c0001t0023g0006
a0001c0001t0024g0156
a0001c0001t0027g0034
a0001c0001t0041g0009
a0001c0001t0042g0008
a0001c0001t0043g0007
a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
a0001c0006t0028g0059
a0001c0007t0036g0026
a0002c0005t0003g0030
a0003c0004t0006g0154
 34 HG01071.hp2
HG01081.hp1
HG01243.hp1
others(31): Show 
HG01071.hp2
HG01081.hp1
HG01243.hp1
HG01884.hp1
HG01884.hp2
HG02055.hp1
HG02280.hp2
HG02486.hp1
HG02572.hp1
HG02615.hp1
HG02615.hp2
HG02647.hp1
HG02717.hp1
HG02809.hp1
HG02886.hp1
HG02886.hp2
HG02922.hp1
HG02922.hp2
HG02965.hp1
HG02976.hp1
HG03041.hp1
HG03098.hp1
HG03130.hp1
HG03209.hp1
HG03225.hp1
HG03471.hp1
HG03486.hp1
HG03491.hp2
HG03516.hp1
HG03516.hp2
HG03579.hp1
HG03654.hp1
NA18522.hp1
NA20300.hp2
 intron_variant MODIFIER c.1303+7444dupT
c.1303+7444dupT
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 11/21 INFO_REALIGN_3_PRIME chrX 21539502
chrX:21539596 A
A
 G
G
 1 a0001c0001t0012g0045
a0001c0001t0012g0045
 1 HG02145.hp1
HG02145.hp1
 intron_variant MODIFIER c.1303+7529A>G
c.1303+7529A>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 11/21 chrX 21539596
chrX:21539622 ACTT
ACTT
 A
A
 1 a0001c0001t0020g0141
a0001c0001t0020g0141
 1 HG01243.hp1
HG01243.hp1
 intron_variant MODIFIER c.1303+7559_1303+756
others(7): Show 
c.1303+7559_1303+7561delCTT
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 11/21 INFO_REALIGN_3_PRIME chrX 21539622
chrX:21540073 A
A
 T
T
 1 a0001c0001t0004g0055
a0001c0001t0004g0055
 1 HG01258.hp1
HG01258.hp1
 intron_variant MODIFIER c.1303+8006A>T
c.1303+8006A>T
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 11/21 chrX 21540073
chrX:21540077 A
A
 G
G
 1 a0001c0001t0004g0055
a0001c0001t0004g0055
 1 HG01258.hp1
HG01258.hp1
 intron_variant MODIFIER c.1303+8010A>G
c.1303+8010A>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 11/21 chrX 21540077
chrX:21540141 G
G
 T
T
 1 a0001c0001t0007g0022
a0001c0001t0007g0022
 1 HG02132.hp1
HG02132.hp1
 intron_variant MODIFIER c.1303+8074G>T
c.1303+8074G>T
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 11/21 chrX 21540141
chrX:21540311 G
G
 A
A
 1 a0001c0001t0003g0031
a0001c0001t0003g0031
 1 HG02976.hp2
HG02976.hp2
 intron_variant MODIFIER c.1303+8244G>A
c.1303+8244G>A
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 11/21 chrX 21540311
chrX:21540460 G
G
 T
T
 1 a0001c0001t0043g0007
a0001c0001t0043g0007
 1 HG03491.hp2
HG03491.hp2
 intron_variant MODIFIER c.1303+8393G>T
c.1303+8393G>T
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 11/21 chrX 21540460
chrX:21540659 A
A
 G
G
 1 a0001c0001t0001g0097
a0001c0001t0001g0097
 1 HG04228.hp1
HG04228.hp1
 intron_variant MODIFIER c.1303+8592A>G
c.1303+8592A>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 11/21 chrX 21540659
chrX:21540970 A
A
 G
G
 3 a0001c0001t0001g0058
a0001c0001t0001g0096
a0001c0001t0030g0086
a0001c0001t0001g0058
a0001c0001t0001g0096
a0001c0001t0030g0086
 3 HG02698.hp1
HG03710.hp1
HG04199.hp1
HG02698.hp1
HG03710.hp1
HG04199.hp1
 intron_variant MODIFIER c.1303+8903A>G
c.1303+8903A>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 11/21 chrX 21540970
chrX:21540988 G
G
 GT
GT
 4 a0001c0001t0001g0036
a0001c0001t0007g0140
a0001c0001t0020g0141
others(1): Show 
a0001c0001t0001g0036
a0001c0001t0007g0140
a0001c0001t0020g0141
a0001c0001t0022g0033
 4 HG01243.hp1
HG02055.hp1
HG02922.hp1
others(1): Show 
HG01243.hp1
HG02055.hp1
HG02922.hp1
HG04115.hp1
 intron_variant MODIFIER c.1303+8933dupT
c.1303+8933dupT
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 11/21 INFO_REALIGN_3_PRIME chrX 21540988
chrX:21541046 G
G
 A
A
 1 a0001c0001t0012g0142
a0001c0001t0012g0142
 1 HG03139.hp1
HG03139.hp1
 intron_variant MODIFIER c.1303+8979G>A
c.1303+8979G>A
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 11/21 chrX 21541046
chrX:21541076 G
G
 A
A
 1 a0001c0001t0002g0019
a0001c0001t0002g0019
 1 HG01106.hp1
HG01106.hp1
 intron_variant MODIFIER c.1303+9009G>A
c.1303+9009G>A
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 11/21 chrX 21541076
chrX:21541132 G
G
 A
A
 1 a0001c0001t0003g0151
a0001c0001t0003g0151
 1 HG01081.hp2
HG01081.hp2
 intron_variant MODIFIER c.1303+9065G>A
c.1303+9065G>A
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 11/21 chrX 21541132
chrX:21541583 A
A
 G
G
 4 a0001c0001t0002g0003
a0001c0001t0002g0110
a0001c0001t0002g0118
others(1): Show 
a0001c0001t0002g0003
a0001c0001t0002g0110
a0001c0001t0002g0118
a0001c0001t0008g0124
 4 HG00621.hp1
HG02074.hp1
NA19012.hp1
others(1): Show 
HG00621.hp1
HG02074.hp1
NA19012.hp1
NA19086.hp1
 intron_variant MODIFIER c.1303+9516A>G
c.1303+9516A>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 11/21 chrX 21541583
chrX:21541617 C
C
 A
A
 4 a0001c0001t0004g0020
a0001c0001t0004g0021
a0001c0001t0004g0056
others(1): Show 
a0001c0001t0004g0020
a0001c0001t0004g0021
a0001c0001t0004g0056
a0001c0001t0004g0057
 4 HG00741.hp1
HG01192.hp1
HG01256.hp1
others(1): Show 
HG00741.hp1
HG01192.hp1
HG01256.hp1
homoSapiens_chm13v2.hp1
 intron_variant MODIFIER c.1303+9550C>A
c.1303+9550C>A
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 11/21 chrX 21541617
chrX:21542249 G
G
 T
T
 1 a0001c0007t0036g0026
a0001c0007t0036g0026
 1 HG01081.hp1
HG01081.hp1
 intron_variant MODIFIER c.1303+10182G>T
c.1303+10182G>T
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 11/21 chrX 21542249
chrX:21542384 G
G
 A
A
 1 a0001c0001t0007g0127
a0001c0001t0007g0127
 1 NA19072.hp1
NA19072.hp1
 intron_variant MODIFIER c.1303+10317G>A
c.1303+10317G>A
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 11/21 chrX 21542384
chrX:21542515 A
A
 G
G
 4 a0001c0001t0003g0015
a0001c0001t0011g0016
a0001c0001t0011g0017
others(1): Show 
a0001c0001t0003g0015
a0001c0001t0011g0016
a0001c0001t0011g0017
a0001c0001t0011g0138
 4 HG02717.hp1
HG03041.hp1
HG03579.hp1
others(1): Show 
HG02717.hp1
HG03041.hp1
HG03579.hp1
NA18522.hp1
 intron_variant MODIFIER c.1303+10448A>G
c.1303+10448A>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 11/21 chrX 21542515
chrX:21542729 G
G
 A
A
 1 a0001c0001t0002g0028
a0001c0001t0002g0028
 1 HG02258.hp1
HG02258.hp1
 intron_variant MODIFIER c.1303+10662G>A
c.1303+10662G>A
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 11/21 chrX 21542729
chrX:21542937 T
T
 C
C
 1 a0001c0001t0001g0109
a0001c0001t0001g0109
 1 HG02738.hp1
HG02738.hp1
 intron_variant MODIFIER c.1303+10870T>C
c.1303+10870T>C
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 11/21 chrX 21542937
chrX:21543057 A
A
 G
G
 3 a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
 3 HG02615.hp1
HG02965.hp1
HG03471.hp1
HG02615.hp1
HG02965.hp1
HG03471.hp1
 intron_variant MODIFIER c.1303+10990A>G
c.1303+10990A>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 11/21 chrX 21543057
chrX:21543336 G
G
 A
A
 3 a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
 3 HG02615.hp1
HG02965.hp1
HG03471.hp1
HG02615.hp1
HG02965.hp1
HG03471.hp1
 intron_variant MODIFIER c.1303+11269G>A
c.1303+11269G>A
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 11/21 chrX 21543336
chrX:21543492 G
G
 A
A
 1 a0001c0003t0014g0147
a0001c0003t0014g0147
 1 HG02615.hp1
HG02615.hp1
 intron_variant MODIFIER c.1303+11425G>A
c.1303+11425G>A
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 11/21 chrX 21543492
chrX:21544172 A
A
 G
G
 3 a0001c0001t0003g0044
a0001c0001t0034g0091
a0001c0001t0037g0092
a0001c0001t0003g0044
a0001c0001t0034g0091
a0001c0001t0037g0092
 3 HG02735.hp1
HG03942.hp1
HG04204.hp1
HG02735.hp1
HG03942.hp1
HG04204.hp1
 intron_variant MODIFIER c.1303+12105A>G
c.1303+12105A>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 11/21 chrX 21544172
chrX:21544316 G
G
 A
A
 1 a0001c0001t0001g0083
a0001c0001t0001g0083
 1 NA20300.hp1
NA20300.hp1
 intron_variant MODIFIER c.1303+12249G>A
c.1303+12249G>A
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 11/21 chrX 21544316
chrX:21544480 T
T
 C
C
 3 a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
 3 HG02615.hp1
HG02965.hp1
HG03471.hp1
HG02615.hp1
HG02965.hp1
HG03471.hp1
 intron_variant MODIFIER c.1303+12413T>C
c.1303+12413T>C
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 11/21 chrX 21544480
chrX:21544486 G
G
 A
A
 1 a0001c0001t0001g0051
a0001c0001t0001g0051
 1 HG01074.hp1
HG01074.hp1
 intron_variant MODIFIER c.1303+12419G>A
c.1303+12419G>A
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 11/21 chrX 21544486
chrX:21544555 G
G
 C
C
 7 a0001c0001t0009g0010
a0001c0001t0009g0011
a0001c0001t0009g0012
others(4): Show 
a0001c0001t0009g0010
a0001c0001t0009g0011
a0001c0001t0009g0012
a0001c0001t0009g0013
a0001c0001t0017g0018
a0001c0001t0019g0014
a0001c0001t0041g0009
 7 HG01071.hp2
HG01884.hp2
HG02280.hp2
others(4): Show 
HG01071.hp2
HG01884.hp2
HG02280.hp2
HG02572.hp1
HG02809.hp1
HG03098.hp1
HG03486.hp1
 intron_variant MODIFIER c.1303+12488G>C
c.1303+12488G>C
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 11/21 chrX 21544555
chrX:21544586 T
T
 C
C
 1 a0001c0001t0016g0085
a0001c0001t0016g0085
 1 HG02300.hp1
HG02300.hp1
 intron_variant MODIFIER c.1303+12519T>C
c.1303+12519T>C
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 11/21 chrX 21544586
chrX:21544792 G
G
 A
A
 1 a0001c0001t0007g0127
a0001c0001t0007g0127
 1 NA19072.hp1
NA19072.hp1
 intron_variant MODIFIER c.1303+12725G>A
c.1303+12725G>A
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 11/21 chrX 21544792
chrX:21544830 A
A
 G
G
 2 a0001c0001t0010g0162
a0001c0001t0042g0008
a0001c0001t0010g0162
a0001c0001t0042g0008
 2 HG02647.hp1
HG03209.hp1
HG02647.hp1
HG03209.hp1
 intron_variant MODIFIER c.1303+12763A>G
c.1303+12763A>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 11/21 chrX 21544830
chrX:21544909 C
C
 T
T
 1 a0001c0001t0002g0114
a0001c0001t0002g0114
 1 HG00140.hp1
HG00140.hp1
 intron_variant MODIFIER c.1303+12842C>T
c.1303+12842C>T
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 11/21 chrX 21544909
chrX:21545815 G
G
 C
C
 3 a0001c0001t0010g0152
a0001c0001t0010g0153
a0001c0001t0010g0162
a0001c0001t0010g0152
a0001c0001t0010g0153
a0001c0001t0010g0162
 3 HG03209.hp1
HG03225.hp1
NA19240.hp2
HG03209.hp1
HG03225.hp1
NA19240.hp2
 intron_variant MODIFIER c.1303+13748G>C
c.1303+13748G>C
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 11/21 chrX 21545815
chrX:21546014 T
T
 G
G
 1 a0001c0001t0041g0009
a0001c0001t0041g0009
 1 HG03098.hp1
HG03098.hp1
 intron_variant MODIFIER c.1303+13947T>G
c.1303+13947T>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 11/21 chrX 21546014
chrX:21546063 G
G
 A
A
 1 a0001c0001t0001g0048
a0001c0001t0001g0048
 1 HG00673.hp1
HG00673.hp1
 intron_variant MODIFIER c.1303+13996G>A
c.1303+13996G>A
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 11/21 chrX 21546063
chrX:21546438 C
C
 T
T
 27 a0001c0001t0003g0015
a0001c0001t0006g0155
a0001c0001t0006g0157
others(24): Show 
a0001c0001t0003g0015
a0001c0001t0006g0155
a0001c0001t0006g0157
a0001c0001t0006g0159
a0001c0001t0006g0160
a0001c0001t0006g0161
a0001c0001t0009g0010
a0001c0001t0009g0011
a0001c0001t0009g0012
a0001c0001t0009g0013
a0001c0001t0010g0152
a0001c0001t0010g0153
a0001c0001t0010g0162
a0001c0001t0011g0016
a0001c0001t0011g0017
a0001c0001t0011g0138
a0001c0001t0017g0018
a0001c0001t0020g0141
a0001c0001t0024g0156
a0001c0001t0041g0009
a0001c0001t0042g0008
a0001c0001t0043g0007
a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
a0001c0006t0028g0059
a0003c0004t0006g0154
 27 HG01071.hp2
HG01243.hp1
HG01884.hp1
others(24): Show 
HG01071.hp2
HG01243.hp1
HG01884.hp1
HG02280.hp2
HG02572.hp1
HG02615.hp1
HG02615.hp2
HG02647.hp1
HG02717.hp1
HG02809.hp1
HG02886.hp1
HG02922.hp2
HG02965.hp1
HG02976.hp1
HG03041.hp1
HG03098.hp1
HG03130.hp1
HG03209.hp1
HG03225.hp1
HG03471.hp1
HG03486.hp1
HG03491.hp2
HG03516.hp2
HG03579.hp1
NA18522.hp1
NA19240.hp2
NA20300.hp2
 intron_variant MODIFIER c.1303+14371C>T
c.1303+14371C>T
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 11/21 chrX 21546438
chrX:21546655 A
A
 T
T
 3 a0001c0001t0001g0058
a0001c0001t0001g0096
a0001c0001t0030g0086
a0001c0001t0001g0058
a0001c0001t0001g0096
a0001c0001t0030g0086
 3 HG02698.hp1
HG03710.hp1
HG04199.hp1
HG02698.hp1
HG03710.hp1
HG04199.hp1
 intron_variant MODIFIER c.1303+14588A>T
c.1303+14588A>T
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 11/21 chrX 21546655
chrX:21546767 G
G
 C
C
 7 a0001c0001t0010g0162
a0001c0001t0022g0033
a0001c0001t0027g0034
others(4): Show 
a0001c0001t0010g0162
a0001c0001t0022g0033
a0001c0001t0027g0034
a0001c0001t0042g0008
a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
 7 HG02055.hp1
HG02486.hp1
HG02615.hp1
others(4): Show 
HG02055.hp1
HG02486.hp1
HG02615.hp1
HG02647.hp1
HG02965.hp1
HG03209.hp1
HG03471.hp1
 intron_variant MODIFIER c.1303+14700G>C
c.1303+14700G>C
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 11/21 chrX 21546767
chrX:21546895 T
T
 C
C
 2 a0001c0001t0010g0162
a0001c0001t0042g0008
a0001c0001t0010g0162
a0001c0001t0042g0008
 2 HG02647.hp1
HG03209.hp1
HG02647.hp1
HG03209.hp1
 intron_variant MODIFIER c.1304-14576T>C
c.1304-14576T>C
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 11/21 chrX 21546895
chrX:21547323 A
A
 G
G
 2 a0001c0001t0002g0004
a0001c0001t0008g0005
a0001c0001t0002g0004
a0001c0001t0008g0005
 2 HG01069.hp1
HG01071.hp1
HG01069.hp1
HG01071.hp1
 intron_variant MODIFIER c.1304-14148A>G
c.1304-14148A>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 11/21 chrX 21547323
chrX:21547365 A
A
 T
T
 1 a0001c0001t0010g0153
a0001c0001t0010g0153
 1 NA19240.hp2
NA19240.hp2
 intron_variant MODIFIER c.1304-14106A>T
c.1304-14106A>T
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 11/21 chrX 21547365
chrX:21547366 C
C
 T
T
 1 a0001c0001t0010g0153
a0001c0001t0010g0153
 1 NA19240.hp2
NA19240.hp2
 intron_variant MODIFIER c.1304-14105C>T
c.1304-14105C>T
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 11/21 chrX 21547366
chrX:21547847 T
T
 G
G
 1 a0001c0001t0043g0007
a0001c0001t0043g0007
 1 HG03491.hp2
HG03491.hp2
 intron_variant MODIFIER c.1304-13624T>G
c.1304-13624T>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 11/21 chrX 21547847
chrX:21547914 G
G
 T
T
 1 a0001c0001t0001g0053
a0001c0001t0001g0053
 1 HG00280.hp1
HG00280.hp1
 intron_variant MODIFIER c.1304-13557G>T
c.1304-13557G>T
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 11/21 chrX 21547914
chrX:21548053 G
G
 A
A
 1 a0001c0001t0012g0142
a0001c0001t0012g0142
 1 HG03139.hp1
HG03139.hp1
 intron_variant MODIFIER c.1304-13418G>A
c.1304-13418G>A
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 11/21 chrX 21548053
chrX:21548133 A
A
 G
G
 3 a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
 3 HG02615.hp1
HG02965.hp1
HG03471.hp1
HG02615.hp1
HG02965.hp1
HG03471.hp1
 intron_variant MODIFIER c.1304-13338A>G
c.1304-13338A>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 11/21 chrX 21548133
chrX:21548493 C
C
 G
G
 1 a0001c0001t0024g0156
a0001c0001t0024g0156
 1 NA20300.hp2
NA20300.hp2
 intron_variant MODIFIER c.1304-12978C>G
c.1304-12978C>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 11/21 chrX 21548493
chrX:21548784 C
C
 T
T
 1 a0001c0001t0001g0080
a0001c0001t0001g0080
 1 HG01255.hp1
HG01255.hp1
 intron_variant MODIFIER c.1304-12687C>T
c.1304-12687C>T
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 11/21 chrX 21548784
chrX:21549026 C
C
 G
G
 12 a0001c0001t0006g0155
a0001c0001t0006g0157
a0001c0001t0006g0159
others(9): Show 
a0001c0001t0006g0155
a0001c0001t0006g0157
a0001c0001t0006g0159
a0001c0001t0006g0160
a0001c0001t0006g0161
a0001c0001t0010g0152
a0001c0001t0010g0153
a0001c0001t0010g0162
a0001c0001t0024g0156
a0001c0006t0028g0059
a0001c0007t0036g0026
a0003c0004t0006g0154
 12 HG01081.hp1
HG01884.hp1
HG02615.hp2
others(9): Show 
HG01081.hp1
HG01884.hp1
HG02615.hp2
HG02886.hp1
HG02922.hp2
HG02976.hp1
HG03130.hp1
HG03209.hp1
HG03225.hp1
HG03516.hp2
NA19240.hp2
NA20300.hp2
 intron_variant MODIFIER c.1304-12445C>G
c.1304-12445C>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 11/21 chrX 21549026
chrX:21549324 A
A
 G
G
 1 a0001c0001t0002g0111
a0001c0001t0002g0111
 1 HG00741.hp2
HG00741.hp2
 intron_variant MODIFIER c.1304-12147A>G
c.1304-12147A>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 11/21 chrX 21549324
chrX:21549520 C
C
 T
T
 2 a0001c0001t0006g0155
a0003c0004t0006g0154
a0001c0001t0006g0155
a0003c0004t0006g0154
 2 HG01884.hp1
HG02922.hp2
HG01884.hp1
HG02922.hp2
 intron_variant MODIFIER c.1304-11951C>T
c.1304-11951C>T
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 11/21 chrX 21549520
chrX:21549672 A
A
 G
G
 26 a0001c0001t0003g0015
a0001c0001t0006g0155
a0001c0001t0006g0157
others(23): Show 
a0001c0001t0003g0015
a0001c0001t0006g0155
a0001c0001t0006g0157
a0001c0001t0006g0159
a0001c0001t0006g0160
a0001c0001t0006g0161
a0001c0001t0009g0010
a0001c0001t0009g0011
a0001c0001t0009g0012
a0001c0001t0009g0013
a0001c0001t0010g0152
a0001c0001t0010g0153
a0001c0001t0010g0162
a0001c0001t0011g0016
a0001c0001t0011g0017
a0001c0001t0011g0138
a0001c0001t0017g0018
a0001c0001t0019g0014
a0001c0001t0020g0141
a0001c0001t0023g0006
a0001c0001t0024g0156
a0001c0001t0041g0009
a0001c0001t0042g0008
a0001c0001t0043g0007
a0001c0006t0028g0059
a0003c0004t0006g0154
 26 HG01071.hp2
HG01243.hp1
HG01884.hp1
others(23): Show 
HG01071.hp2
HG01243.hp1
HG01884.hp1
HG01884.hp2
HG02280.hp2
HG02572.hp1
HG02615.hp2
HG02647.hp1
HG02717.hp1
HG02809.hp1
HG02886.hp1
HG02922.hp2
HG02976.hp1
HG03041.hp1
HG03098.hp1
HG03130.hp1
HG03209.hp1
HG03225.hp1
HG03486.hp1
HG03491.hp2
HG03516.hp2
HG03579.hp1
HG03654.hp1
NA18522.hp1
NA19240.hp2
NA20300.hp2
 intron_variant MODIFIER c.1304-11799A>G
c.1304-11799A>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 11/21 chrX 21549672
chrX:21549813 T
T
 C
C
 14 a0001c0001t0006g0155
a0001c0001t0006g0157
a0001c0001t0006g0159
others(11): Show 
a0001c0001t0006g0155
a0001c0001t0006g0157
a0001c0001t0006g0159
a0001c0001t0006g0160
a0001c0001t0006g0161
a0001c0001t0010g0152
a0001c0001t0010g0153
a0001c0001t0010g0162
a0001c0001t0017g0018
a0001c0001t0023g0006
a0001c0001t0024g0156
a0001c0001t0043g0007
a0001c0006t0028g0059
a0003c0004t0006g0154
 14 HG01071.hp2
HG01884.hp1
HG02615.hp2
others(11): Show 
HG01071.hp2
HG01884.hp1
HG02615.hp2
HG02886.hp1
HG02922.hp2
HG02976.hp1
HG03130.hp1
HG03209.hp1
HG03225.hp1
HG03491.hp2
HG03516.hp2
HG03654.hp1
NA19240.hp2
NA20300.hp2
 intron_variant MODIFIER c.1304-11658T>C
c.1304-11658T>C
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 11/21 chrX 21549813
chrX:21550233 G
G
 A
A
 32 a0001c0001t0003g0015
a0001c0001t0006g0155
a0001c0001t0006g0157
others(29): Show 
a0001c0001t0003g0015
a0001c0001t0006g0155
a0001c0001t0006g0157
a0001c0001t0006g0159
a0001c0001t0006g0160
a0001c0001t0006g0161
a0001c0001t0007g0140
a0001c0001t0009g0010
a0001c0001t0009g0011
a0001c0001t0009g0012
a0001c0001t0009g0013
a0001c0001t0010g0152
a0001c0001t0010g0153
a0001c0001t0010g0162
a0001c0001t0011g0016
a0001c0001t0011g0017
a0001c0001t0011g0138
a0001c0001t0017g0018
a0001c0001t0019g0014
a0001c0001t0020g0141
a0001c0001t0022g0033
a0001c0001t0024g0156
a0001c0001t0027g0034
a0001c0001t0041g0009
a0001c0001t0042g0008
a0001c0001t0043g0007
a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
a0001c0006t0028g0059
a0001c0007t0036g0026
a0003c0004t0006g0154
 32 HG01071.hp2
HG01081.hp1
HG01243.hp1
others(29): Show 
HG01071.hp2
HG01081.hp1
HG01243.hp1
HG01884.hp1
HG01884.hp2
HG02055.hp1
HG02280.hp2
HG02486.hp1
HG02572.hp1
HG02615.hp1
HG02615.hp2
HG02647.hp1
HG02717.hp1
HG02809.hp1
HG02886.hp1
HG02922.hp1
HG02922.hp2
HG02965.hp1
HG02976.hp1
HG03041.hp1
HG03098.hp1
HG03130.hp1
HG03209.hp1
HG03225.hp1
HG03471.hp1
HG03486.hp1
HG03491.hp2
HG03516.hp2
HG03579.hp1
NA18522.hp1
NA19240.hp2
NA20300.hp2
 intron_variant MODIFIER c.1304-11238G>A
c.1304-11238G>A
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 11/21 chrX 21550233
chrX:21550362 G
G
 A
A
 2 a0001c0001t0004g0129
a0001c0001t0013g0066
a0001c0001t0004g0129
a0001c0001t0013g0066
 2 HG00609.hp1
HG01167.hp1
HG00609.hp1
HG01167.hp1
 intron_variant MODIFIER c.1304-11109G>A
c.1304-11109G>A
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 11/21 chrX 21550362
chrX:21550618 G
G
 A
A
 1 a0001c0001t0004g0064
a0001c0001t0004g0064
 1 HG00738.hp1
HG00738.hp1
 intron_variant MODIFIER c.1304-10853G>A
c.1304-10853G>A
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 11/21 chrX 21550618
chrX:21550971 G
G
 C
C
 1 a0001c0001t0017g0018
a0001c0001t0017g0018
 1 HG01071.hp2
HG01071.hp2
 intron_variant MODIFIER c.1304-10500G>C
c.1304-10500G>C
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 11/21 chrX 21550971
chrX:21551030 CA
CA
 C
C
 26 a0001c0001t0002g0003
a0001c0001t0002g0046
a0001c0001t0002g0047
others(23): Show 
a0001c0001t0002g0003
a0001c0001t0002g0046
a0001c0001t0002g0047
a0001c0001t0002g0049
a0001c0001t0002g0050
a0001c0001t0002g0110
a0001c0001t0002g0111
a0001c0001t0002g0112
a0001c0001t0002g0113
a0001c0001t0002g0114
a0001c0001t0002g0118
a0001c0001t0002g0119
a0001c0001t0002g0120
a0001c0001t0002g0121
a0001c0001t0002g0122
a0001c0001t0002g0125
a0001c0001t0002g0126
a0001c0001t0004g0117
a0001c0001t0008g0124
a0001c0001t0008g0135
a0001c0001t0008g0143
a0001c0001t0039g0144
a0001c0001t0043g0007
a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
 26 HG00140.hp1
HG00621.hp1
HG00735.hp1
others(23): Show 
HG00140.hp1
HG00621.hp1
HG00735.hp1
HG00741.hp2
HG01433.hp1
HG02015.hp1
HG02074.hp1
HG02083.hp1
HG02615.hp1
HG02965.hp1
HG03471.hp1
HG03491.hp2
NA18612.hp1
NA18943.hp1
NA18944.hp1
NA18966.hp1
NA18986.hp1
NA18990.hp1
NA19000.hp1
NA19004.hp1
NA19012.hp1
NA19055.hp1
NA19070.hp1
NA19076.hp1
NA19086.hp1
NA19091.hp1
 intron_variant MODIFIER c.1304-10426delA
c.1304-10426delA
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 11/21 INFO_REALIGN_3_PRIME chrX 21551030
chrX:21551218 G
G
 A
A
 4 a0001c0001t0002g0111
a0001c0001t0002g0112
a0001c0001t0002g0113
others(1): Show 
a0001c0001t0002g0111
a0001c0001t0002g0112
a0001c0001t0002g0113
a0001c0001t0002g0114
 4 HG00140.hp1
HG00735.hp1
HG00741.hp2
others(1): Show 
HG00140.hp1
HG00735.hp1
HG00741.hp2
HG01433.hp1
 intron_variant MODIFIER c.1304-10253G>A
c.1304-10253G>A
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 11/21 chrX 21551218
chrX:21551322 A
A
 T
T
 1 a0001c0001t0041g0009
a0001c0001t0041g0009
 1 HG03098.hp1
HG03098.hp1
 intron_variant MODIFIER c.1304-10149A>T
c.1304-10149A>T
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 11/21 chrX 21551322
chrX:21551369 G
G
 A
A
 1 a0001c0001t0001g0062
a0001c0001t0001g0062
 1 NA18988.hp1
NA18988.hp1
 intron_variant MODIFIER c.1304-10102G>A
c.1304-10102G>A
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 11/21 chrX 21551369
chrX:21551505 G
G
 A
A
 21 a0001c0001t0002g0003
a0001c0001t0002g0046
a0001c0001t0002g0047
others(18): Show 
a0001c0001t0002g0003
a0001c0001t0002g0046
a0001c0001t0002g0047
a0001c0001t0002g0049
a0001c0001t0002g0050
a0001c0001t0002g0110
a0001c0001t0002g0111
a0001c0001t0002g0112
a0001c0001t0002g0113
a0001c0001t0002g0114
a0001c0001t0002g0118
a0001c0001t0002g0119
a0001c0001t0002g0120
a0001c0001t0002g0121
a0001c0001t0002g0122
a0001c0001t0002g0126
a0001c0001t0008g0124
a0001c0001t0008g0135
a0001c0001t0008g0143
a0001c0001t0012g0142
a0001c0001t0039g0144
 21 HG00140.hp1
HG00621.hp1
HG00735.hp1
others(18): Show 
HG00140.hp1
HG00621.hp1
HG00735.hp1
HG00741.hp2
HG01433.hp1
HG02074.hp1
HG02083.hp1
HG03139.hp1
NA18612.hp1
NA18943.hp1
NA18944.hp1
NA18966.hp1
NA18986.hp1
NA18990.hp1
NA19000.hp1
NA19004.hp1
NA19012.hp1
NA19055.hp1
NA19070.hp1
NA19076.hp1
NA19086.hp1
 intron_variant MODIFIER c.1304-9966G>A
c.1304-9966G>A
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 11/21 chrX 21551505
chrX:21551802 A
A
 G
G
 22 a0001c0001t0001g0037
a0001c0001t0001g0048
a0001c0001t0001g0062
others(19): Show 
a0001c0001t0001g0037
a0001c0001t0001g0048
a0001c0001t0001g0062
a0001c0001t0001g0067
a0001c0001t0001g0068
a0001c0001t0001g0069
a0001c0001t0001g0071
a0001c0001t0001g0075
a0001c0001t0001g0076
a0001c0001t0001g0131
a0001c0001t0001g0134
a0001c0001t0003g0061
a0001c0001t0003g0133
a0001c0001t0003g0136
a0001c0001t0004g0064
a0001c0001t0005g0063
a0001c0001t0005g0072
a0001c0001t0021g0088
a0001c0001t0025g0130
a0001c0001t0031g0065
a0001c0001t0032g0163
a0001c0001t0033g0002
 22 HG00673.hp1
HG00738.hp1
HG02040.hp1
others(19): Show 
HG00673.hp1
HG00738.hp1
HG02040.hp1
HG02071.hp1
HG02135.hp1
NA18945.hp1
NA18948.hp1
NA18952.hp1
NA18953.hp1
NA18959.hp1
NA18962.hp1
NA18965.hp1
NA18970.hp1
NA18982.hp1
NA18988.hp1
NA18989.hp1
NA19006.hp1
NA19058.hp1
NA19060.hp1
NA19062.hp1
NA19063.hp1
NA19085.hp1
 intron_variant MODIFIER c.1304-9669A>G
c.1304-9669A>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 11/21 chrX 21551802
chrX:21551948 A
A
 G
G
 4 a0001c0001t0001g0068
a0001c0001t0001g0069
a0001c0001t0031g0065
others(1): Show 
a0001c0001t0001g0068
a0001c0001t0001g0069
a0001c0001t0031g0065
a0001c0001t0033g0002
 4 HG02040.hp1
NA18989.hp1
NA19006.hp1
others(1): Show 
HG02040.hp1
NA18989.hp1
NA19006.hp1
NA19085.hp1
 intron_variant MODIFIER c.1304-9523A>G
c.1304-9523A>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 11/21 chrX 21551948
chrX:21552099 G
G
 GA
GA
 1 a0001c0001t0025g0130
a0001c0001t0025g0130
 1 NA19062.hp1
NA19062.hp1
 intron_variant MODIFIER c.1304-9358dupA
c.1304-9358dupA
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 11/21 INFO_REALIGN_3_PRIME chrX 21552099
chrX:21552099 GA
GA
 G
G
 5 a0001c0001t0001g0131
a0001c0001t0011g0016
a0001c0003t0014g0147
others(2): Show 
a0001c0001t0001g0131
a0001c0001t0011g0016
a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
 5 HG02615.hp1
HG02965.hp1
HG03471.hp1
others(2): Show 
HG02615.hp1
HG02965.hp1
HG03471.hp1
NA18522.hp1
NA18959.hp1
 intron_variant MODIFIER c.1304-9358delA
c.1304-9358delA
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 11/21 INFO_REALIGN_3_PRIME chrX 21552099
chrX:21552212 G
G
 A
A
 2 a0001c0001t0001g0068
a0001c0001t0033g0002
a0001c0001t0001g0068
a0001c0001t0033g0002
 2 NA18989.hp1
NA19006.hp1
NA18989.hp1
NA19006.hp1
 intron_variant MODIFIER c.1304-9259G>A
c.1304-9259G>A
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 11/21 chrX 21552212
chrX:21552598 A
A
 C
C
 4 a0001c0001t0019g0014
a0001c0003t0014g0147
a0001c0003t0014g0149
others(1): Show 
a0001c0001t0019g0014
a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
 4 HG01884.hp2
HG02615.hp1
HG02965.hp1
others(1): Show 
HG01884.hp2
HG02615.hp1
HG02965.hp1
HG03471.hp1
 intron_variant MODIFIER c.1304-8873A>C
c.1304-8873A>C
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 11/21 chrX 21552598
chrX:21552617 G
G
 A
A
 5 a0001c0001t0007g0022
a0001c0001t0042g0008
a0001c0003t0014g0147
others(2): Show 
a0001c0001t0007g0022
a0001c0001t0042g0008
a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
 5 HG02132.hp1
HG02615.hp1
HG02647.hp1
others(2): Show 
HG02132.hp1
HG02615.hp1
HG02647.hp1
HG02965.hp1
HG03471.hp1
 intron_variant MODIFIER c.1304-8854G>A
c.1304-8854G>A
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 11/21 chrX 21552617
chrX:21552875 G
G
 A
A
 1 a0001c0001t0012g0045
a0001c0001t0012g0045
 1 HG02145.hp1
HG02145.hp1
 intron_variant MODIFIER c.1304-8596G>A
c.1304-8596G>A
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 11/21 chrX 21552875
chrX:21553161 CA
CA
 C
C
 1 a0001c0007t0036g0026
a0001c0007t0036g0026
 1 HG01081.hp1
HG01081.hp1
 intron_variant MODIFIER c.1304-8301delA
c.1304-8301delA
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 11/21 INFO_REALIGN_3_PRIME chrX 21553161
chrX:21553215 T
T
 G
G
 1 a0001c0001t0029g0023
a0001c0001t0029g0023
 1 HG01099.hp1
HG01099.hp1
 intron_variant MODIFIER c.1304-8256T>G
c.1304-8256T>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 11/21 chrX 21553215
chrX:21553479 CT
CT
 C
C
 8 a0001c0001t0002g0028
a0001c0001t0003g0024
a0001c0001t0003g0029
others(5): Show 
a0001c0001t0002g0028
a0001c0001t0003g0024
a0001c0001t0003g0029
a0001c0001t0003g0151
a0001c0001t0012g0025
a0001c0001t0017g0146
a0001c0001t0038g0150
a0001c0001t0040g0027
 8 HG01081.hp2
HG01109.hp1
HG02258.hp1
others(5): Show 
HG01081.hp2
HG01109.hp1
HG02258.hp1
HG02280.hp1
HG02895.hp1
HG03486.hp2
NA19043.hp1
NA19240.hp1
 intron_variant MODIFIER c.1304-7991delT
c.1304-7991delT
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 11/21 chrX 21553479
chrX:21553497 G
G
 T
T
 3 a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
 3 HG02615.hp1
HG02965.hp1
HG03471.hp1
HG02615.hp1
HG02965.hp1
HG03471.hp1
 intron_variant MODIFIER c.1304-7974G>T
c.1304-7974G>T
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 11/21 chrX 21553497
chrX:21553534 C
C
 CA
CA
 4 a0001c0001t0005g0079
a0001c0001t0005g0095
a0001c0001t0005g0099
others(1): Show 
a0001c0001t0005g0079
a0001c0001t0005g0095
a0001c0001t0005g0099
a0001c0001t0016g0085
 4 HG02300.hp1
NA18747.hp1
NA18960.hp1
others(1): Show 
HG02300.hp1
NA18747.hp1
NA18960.hp1
NA18961.hp1
 intron_variant MODIFIER c.1304-7924dupA
c.1304-7924dupA
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 11/21 INFO_REALIGN_3_PRIME chrX 21553534
chrX:21553534 CA
CA
 C
C
 11 a0001c0001t0006g0155
a0001c0001t0006g0157
a0001c0001t0006g0159
others(8): Show 
a0001c0001t0006g0155
a0001c0001t0006g0157
a0001c0001t0006g0159
a0001c0001t0006g0160
a0001c0001t0006g0161
a0001c0001t0010g0152
a0001c0001t0010g0153
a0001c0001t0010g0162
a0001c0001t0024g0156
a0001c0006t0028g0059
a0003c0004t0006g0154
 11 HG01884.hp1
HG02615.hp2
HG02886.hp1
others(8): Show 
HG01884.hp1
HG02615.hp2
HG02886.hp1
HG02922.hp2
HG02976.hp1
HG03130.hp1
HG03209.hp1
HG03225.hp1
HG03516.hp2
NA19240.hp2
NA20300.hp2
 intron_variant MODIFIER c.1304-7924delA
c.1304-7924delA
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 11/21 INFO_REALIGN_3_PRIME chrX 21553534
chrX:21553571 A
A
 G
G
 1 a0001c0001t0013g0100
a0001c0001t0013g0100
 1 NA18955.hp1
NA18955.hp1
 intron_variant MODIFIER c.1304-7900A>G
c.1304-7900A>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 11/21 chrX 21553571
chrX:21553691 CT
CT
 C
C
 4 a0001c0001t0003g0015
a0001c0001t0011g0016
a0001c0001t0011g0017
others(1): Show 
a0001c0001t0003g0015
a0001c0001t0011g0016
a0001c0001t0011g0017
a0001c0001t0011g0138
 4 HG02717.hp1
HG03041.hp1
HG03579.hp1
others(1): Show 
HG02717.hp1
HG03041.hp1
HG03579.hp1
NA18522.hp1
 intron_variant MODIFIER c.1304-7778delT
c.1304-7778delT
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 11/21 INFO_REALIGN_3_PRIME chrX 21553691
chrX:21554478 C
C
 T
T
 1 a0001c0007t0036g0026
a0001c0007t0036g0026
 1 HG01081.hp1
HG01081.hp1
 intron_variant MODIFIER c.1304-6993C>T
c.1304-6993C>T
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 11/21 chrX 21554478
chrX:21554782 T
T
 C
C
 35 a0001c0001t0001g0001
a0001c0001t0001g0035
a0001c0001t0001g0039
others(32): Show 
a0001c0001t0001g0001
a0001c0001t0001g0035
a0001c0001t0001g0039
a0001c0001t0001g0052
a0001c0001t0001g0058
a0001c0001t0001g0078
a0001c0001t0001g0080
a0001c0001t0001g0081
a0001c0001t0001g0082
a0001c0001t0001g0083
a0001c0001t0001g0084
a0001c0001t0001g0087
a0001c0001t0001g0089
a0001c0001t0001g0090
a0001c0001t0001g0094
a0001c0001t0001g0096
a0001c0001t0001g0102
a0001c0001t0001g0103
a0001c0001t0001g0128
a0001c0001t0001g0145
a0001c0001t0002g0115
a0001c0001t0003g0044
a0001c0001t0003g0070
a0001c0001t0003g0101
a0001c0001t0005g0079
a0001c0001t0005g0095
a0001c0001t0005g0099
a0001c0001t0007g0022
a0001c0001t0007g0127
a0001c0001t0016g0085
a0001c0001t0025g0130
a0001c0001t0030g0086
a0001c0001t0034g0091
a0001c0001t0035g0054
a0001c0001t0037g0092
 35 HG00642.hp1
HG01255.hp1
HG01261.hp1
others(32): Show 
HG00642.hp1
HG01255.hp1
HG01261.hp1
HG01928.hp1
HG02056.hp1
HG02132.hp1
HG02300.hp1
HG02698.hp1
HG02735.hp1
HG03491.hp1
HG03492.hp1
HG03710.hp1
HG03942.hp1
HG04199.hp1
HG04204.hp1
NA18747.hp1
NA18960.hp1
NA18961.hp1
NA18967.hp1
NA18971.hp1
NA18974.hp1
NA18994.hp1
NA18995.hp1
NA19005.hp1
NA19007.hp1
NA19009.hp1
NA19062.hp1
NA19066.hp1
NA19068.hp1
NA19072.hp1
NA19082.hp1
NA19088.hp1
NA19089.hp1
NA20300.hp1
NA20905.hp1
 intron_variant MODIFIER c.1304-6689T>C
c.1304-6689T>C
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 11/21 chrX 21554782
chrX:21555007 C
C
 CT
CT
 1 a0001c0007t0036g0026
a0001c0007t0036g0026
 1 HG01081.hp1
HG01081.hp1
 intron_variant MODIFIER c.1304-6449dupT
c.1304-6449dupT
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 11/21 INFO_REALIGN_3_PRIME chrX 21555007
chrX:21555400 C
C
 G
G
 17 a0001c0001t0003g0015
a0001c0001t0009g0010
a0001c0001t0009g0011
others(14): Show 
a0001c0001t0003g0015
a0001c0001t0009g0010
a0001c0001t0009g0011
a0001c0001t0009g0012
a0001c0001t0009g0013
a0001c0001t0011g0016
a0001c0001t0011g0017
a0001c0001t0011g0138
a0001c0001t0019g0014
a0001c0001t0020g0141
a0001c0001t0023g0006
a0001c0001t0041g0009
a0001c0001t0042g0008
a0001c0001t0043g0007
a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
 17 HG01243.hp1
HG01884.hp2
HG02280.hp2
others(14): Show 
HG01243.hp1
HG01884.hp2
HG02280.hp2
HG02572.hp1
HG02615.hp1
HG02647.hp1
HG02717.hp1
HG02809.hp1
HG02965.hp1
HG03041.hp1
HG03098.hp1
HG03471.hp1
HG03486.hp1
HG03491.hp2
HG03579.hp1
HG03654.hp1
NA18522.hp1
 intron_variant MODIFIER c.1304-6071C>G
c.1304-6071C>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 11/21 chrX 21555400
chrX:21555424 C
C
 G
G
 1 a0001c0001t0007g0127
a0001c0001t0007g0127
 1 NA19072.hp1
NA19072.hp1
 intron_variant MODIFIER c.1304-6047C>G
c.1304-6047C>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 11/21 chrX 21555424
chrX:21555443 A
A
 G
G
 1 a0001c0001t0007g0127
a0001c0001t0007g0127
 1 NA19072.hp1
NA19072.hp1
 intron_variant MODIFIER c.1304-6028A>G
c.1304-6028A>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 11/21 chrX 21555443
chrX:21555457 T
T
 C
C
 1 a0001c0001t0011g0017
a0001c0001t0011g0017
 1 HG03579.hp1
HG03579.hp1
 intron_variant MODIFIER c.1304-6014T>C
c.1304-6014T>C
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 11/21 chrX 21555457
chrX:21557645 G
G
 A
A
 69 a0001c0001t0002g0003
a0001c0001t0002g0004
a0001c0001t0002g0019
others(66): Show 
a0001c0001t0002g0003
a0001c0001t0002g0004
a0001c0001t0002g0019
a0001c0001t0002g0028
a0001c0001t0002g0046
a0001c0001t0002g0047
a0001c0001t0002g0049
a0001c0001t0002g0050
a0001c0001t0002g0110
a0001c0001t0002g0111
a0001c0001t0002g0112
a0001c0001t0002g0113
a0001c0001t0002g0114
a0001c0001t0002g0118
a0001c0001t0002g0119
a0001c0001t0002g0120
a0001c0001t0002g0121
a0001c0001t0002g0122
a0001c0001t0002g0125
a0001c0001t0002g0126
a0001c0001t0003g0015
a0001c0001t0003g0024
a0001c0001t0003g0029
a0001c0001t0003g0031
a0001c0001t0003g0151
a0001c0001t0006g0155
a0001c0001t0006g0157
a0001c0001t0006g0159
a0001c0001t0006g0160
a0001c0001t0006g0161
a0001c0001t0007g0140
a0001c0001t0008g0005
a0001c0001t0008g0124
a0001c0001t0008g0135
a0001c0001t0008g0143
a0001c0001t0009g0010
a0001c0001t0009g0011
a0001c0001t0009g0012
a0001c0001t0009g0013
a0001c0001t0010g0152
a0001c0001t0010g0153
a0001c0001t0010g0162
a0001c0001t0011g0016
a0001c0001t0011g0017
a0001c0001t0011g0138
a0001c0001t0012g0025
a0001c0001t0012g0045
a0001c0001t0012g0142
a0001c0001t0017g0018
a0001c0001t0017g0146
a0001c0001t0019g0014
a0001c0001t0020g0141
a0001c0001t0022g0033
a0001c0001t0023g0006
a0001c0001t0024g0156
a0001c0001t0027g0034
a0001c0001t0038g0150
a0001c0001t0039g0144
a0001c0001t0040g0027
a0001c0001t0041g0009
a0001c0001t0042g0008
a0001c0001t0043g0007
a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
a0001c0006t0028g0059
a0001c0007t0036g0026
a0002c0005t0003g0030
a0003c0004t0006g0154
 69 HG00140.hp1
HG00621.hp1
HG00735.hp1
others(66): Show 
HG00140.hp1
HG00621.hp1
HG00735.hp1
HG00741.hp2
HG01069.hp1
HG01071.hp1
HG01071.hp2
HG01081.hp1
HG01081.hp2
HG01106.hp1
HG01109.hp1
HG01243.hp1
HG01433.hp1
HG01884.hp1
HG01884.hp2
HG02055.hp1
HG02074.hp1
HG02083.hp1
HG02145.hp1
HG02258.hp1
HG02280.hp1
HG02280.hp2
HG02486.hp1
HG02572.hp1
HG02615.hp1
HG02615.hp2
HG02647.hp1
HG02717.hp1
HG02809.hp1
HG02886.hp1
HG02886.hp2
HG02895.hp1
HG02922.hp1
HG02922.hp2
HG02965.hp1
HG02976.hp1
HG02976.hp2
HG03041.hp1
HG03098.hp1
HG03130.hp1
HG03139.hp1
HG03209.hp1
HG03225.hp1
HG03471.hp1
HG03486.hp1
HG03486.hp2
HG03491.hp2
HG03516.hp2
HG03579.hp1
HG03654.hp1
NA18522.hp1
NA18612.hp1
NA18943.hp1
NA18944.hp1
NA18966.hp1
NA18986.hp1
NA18990.hp1
NA19000.hp1
NA19004.hp1
NA19012.hp1
NA19043.hp1
NA19055.hp1
NA19070.hp1
NA19076.hp1
NA19086.hp1
NA19091.hp1
NA19240.hp1
NA19240.hp2
NA20300.hp2
 intron_variant MODIFIER c.1304-3826G>A
c.1304-3826G>A
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 11/21 chrX 21557645
chrX:21557758 T
T
 A
A
 4 a0001c0001t0002g0004
a0001c0001t0003g0031
a0001c0001t0008g0005
others(1): Show 
a0001c0001t0002g0004
a0001c0001t0003g0031
a0001c0001t0008g0005
a0001c0001t0042g0008
 4 HG01069.hp1
HG01071.hp1
HG02647.hp1
others(1): Show 
HG01069.hp1
HG01071.hp1
HG02647.hp1
HG02976.hp2
 intron_variant MODIFIER c.1304-3713T>A
c.1304-3713T>A
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 11/21 chrX 21557758
chrX:21557818 T
T
 C
C
 3 a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
 3 HG02615.hp1
HG02965.hp1
HG03471.hp1
HG02615.hp1
HG02965.hp1
HG03471.hp1
 intron_variant MODIFIER c.1304-3653T>C
c.1304-3653T>C
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 11/21 chrX 21557818
chrX:21557943 G
G
 C
C
 2 a0001c0001t0001g0102
a0001c0001t0001g0103
a0001c0001t0001g0102
a0001c0001t0001g0103
 2 HG03491.hp1
HG03492.hp1
HG03491.hp1
HG03492.hp1
 intron_variant MODIFIER c.1304-3528G>C
c.1304-3528G>C
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 11/21 chrX 21557943
chrX:21558103 C
C
 T
T
 3 a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
 3 HG02615.hp1
HG02965.hp1
HG03471.hp1
HG02615.hp1
HG02965.hp1
HG03471.hp1
 intron_variant MODIFIER c.1304-3368C>T
c.1304-3368C>T
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 11/21 chrX 21558103
chrX:21558381 T
T
 A
A
 2 a0001c0001t0022g0033
a0001c0001t0027g0034
a0001c0001t0022g0033
a0001c0001t0027g0034
 2 HG02055.hp1
HG02486.hp1
HG02055.hp1
HG02486.hp1
 intron_variant MODIFIER c.1304-3090T>A
c.1304-3090T>A
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 11/21 chrX 21558381
chrX:21558552 T
T
 TA
TA
 4 a0001c0001t0002g0004
a0001c0001t0003g0031
a0001c0001t0008g0005
others(1): Show 
a0001c0001t0002g0004
a0001c0001t0003g0031
a0001c0001t0008g0005
a0001c0001t0019g0014
 4 HG01069.hp1
HG01071.hp1
HG01884.hp2
others(1): Show 
HG01069.hp1
HG01071.hp1
HG01884.hp2
HG02976.hp2
 intron_variant MODIFIER c.1304-2908dupA
c.1304-2908dupA
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 11/21 INFO_REALIGN_3_PRIME chrX 21558552
chrX:21558677 T
T
 G
G
 2 a0001c0001t0022g0033
a0001c0001t0027g0034
a0001c0001t0022g0033
a0001c0001t0027g0034
 2 HG02055.hp1
HG02486.hp1
HG02055.hp1
HG02486.hp1
 intron_variant MODIFIER c.1304-2794T>G
c.1304-2794T>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 11/21 chrX 21558677
chrX:21558885 AT
AT
 A
A
 1 a0001c0001t0001g0075
a0001c0001t0001g0075
 1 NA18948.hp1
NA18948.hp1
 intron_variant MODIFIER c.1304-2580delT
c.1304-2580delT
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 11/21 INFO_REALIGN_3_PRIME chrX 21558885
chrX:21559112 G
G
 A
A
 3 a0001c0001t0010g0152
a0001c0001t0010g0153
a0001c0001t0010g0162
a0001c0001t0010g0152
a0001c0001t0010g0153
a0001c0001t0010g0162
 3 HG03209.hp1
HG03225.hp1
NA19240.hp2
HG03209.hp1
HG03225.hp1
NA19240.hp2
 intron_variant MODIFIER c.1304-2359G>A
c.1304-2359G>A
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 11/21 chrX 21559112
chrX:21559255 A
A
 G
G
 1 a0001c0001t0012g0045
a0001c0001t0012g0045
 1 HG02145.hp1
HG02145.hp1
 intron_variant MODIFIER c.1304-2216A>G
c.1304-2216A>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 11/21 chrX 21559255
chrX:21559302 T
T
 C
C
 7 a0001c0001t0002g0004
a0001c0001t0003g0031
a0001c0001t0008g0005
others(4): Show 
a0001c0001t0002g0004
a0001c0001t0003g0031
a0001c0001t0008g0005
a0001c0001t0042g0008
a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
 7 HG01069.hp1
HG01071.hp1
HG02615.hp1
others(4): Show 
HG01069.hp1
HG01071.hp1
HG02615.hp1
HG02647.hp1
HG02965.hp1
HG02976.hp2
HG03471.hp1
 intron_variant MODIFIER c.1304-2169T>C
c.1304-2169T>C
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 11/21 chrX 21559302
chrX:21559520 A
A
 G
G
 3 a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
 3 HG02615.hp1
HG02965.hp1
HG03471.hp1
HG02615.hp1
HG02965.hp1
HG03471.hp1
 intron_variant MODIFIER c.1304-1951A>G
c.1304-1951A>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 11/21 chrX 21559520
chrX:21559523 G
G
 A
A
 6 a0001c0001t0002g0004
a0001c0001t0003g0031
a0001c0001t0008g0005
others(3): Show 
a0001c0001t0002g0004
a0001c0001t0003g0031
a0001c0001t0008g0005
a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
 6 HG01069.hp1
HG01071.hp1
HG02615.hp1
others(3): Show 
HG01069.hp1
HG01071.hp1
HG02615.hp1
HG02965.hp1
HG02976.hp2
HG03471.hp1
 intron_variant MODIFIER c.1304-1948G>A
c.1304-1948G>A
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 11/21 chrX 21559523
chrX:21559668 T
T
 G
G
 6 a0001c0001t0002g0004
a0001c0001t0003g0031
a0001c0001t0008g0005
others(3): Show 
a0001c0001t0002g0004
a0001c0001t0003g0031
a0001c0001t0008g0005
a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
 6 HG01069.hp1
HG01071.hp1
HG02615.hp1
others(3): Show 
HG01069.hp1
HG01071.hp1
HG02615.hp1
HG02965.hp1
HG02976.hp2
HG03471.hp1
 intron_variant MODIFIER c.1304-1803T>G
c.1304-1803T>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 11/21 chrX 21559668
chrX:21560241 G
G
 C
C
 3 a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
 3 HG02615.hp1
HG02965.hp1
HG03471.hp1
HG02615.hp1
HG02965.hp1
HG03471.hp1
 intron_variant MODIFIER c.1304-1230G>C
c.1304-1230G>C
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 11/21 chrX 21560241
chrX:21560380 A
A
 G
G
 1 a0001c0001t0008g0124
a0001c0001t0008g0124
 1 NA19012.hp1
NA19012.hp1
 intron_variant MODIFIER c.1304-1091A>G
c.1304-1091A>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 11/21 chrX 21560380
chrX:21560403 C
C
 T
T
 1 a0001c0001t0010g0152
a0001c0001t0010g0152
 1 HG03225.hp1
HG03225.hp1
 intron_variant MODIFIER c.1304-1068C>T
c.1304-1068C>T
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 11/21 chrX 21560403
chrX:21560883 T
T
 C
C
 3 a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
 3 HG02615.hp1
HG02965.hp1
HG03471.hp1
HG02615.hp1
HG02965.hp1
HG03471.hp1
 intron_variant MODIFIER c.1304-588T>C
c.1304-588T>C
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 11/21 chrX 21560883
chrX:21561167 T
T
 C
C
 1 a0001c0001t0007g0022
a0001c0001t0007g0022
 1 HG02132.hp1
HG02132.hp1
 intron_variant MODIFIER c.1304-304T>C
c.1304-304T>C
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 11/21 chrX 21561167
chrX:21561182 T
T
 TA
TA
 3 a0001c0001t0001g0071
a0001c0001t0003g0024
a0001c0001t0004g0055
a0001c0001t0001g0071
a0001c0001t0003g0024
a0001c0001t0004g0055
 3 HG01258.hp1
HG02280.hp1
NA18945.hp1
HG01258.hp1
HG02280.hp1
NA18945.hp1
 intron_variant MODIFIER c.1304-271dupA
c.1304-271dupA
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 11/21 INFO_REALIGN_3_PRIME chrX 21561182
chrX:21561182 TA
TA
 T
T
 36 a0001c0001t0001g0060
a0001c0001t0001g0102
a0001c0001t0001g0103
others(33): Show 
a0001c0001t0001g0060
a0001c0001t0001g0102
a0001c0001t0001g0103
a0001c0001t0002g0003
a0001c0001t0002g0004
a0001c0001t0002g0046
a0001c0001t0002g0047
a0001c0001t0002g0049
a0001c0001t0002g0050
a0001c0001t0002g0110
a0001c0001t0002g0111
a0001c0001t0002g0112
a0001c0001t0002g0113
a0001c0001t0002g0114
a0001c0001t0002g0118
a0001c0001t0002g0119
a0001c0001t0002g0120
a0001c0001t0002g0121
a0001c0001t0002g0122
a0001c0001t0002g0125
a0001c0001t0002g0126
a0001c0001t0004g0020
a0001c0001t0004g0021
a0001c0001t0004g0056
a0001c0001t0004g0057
a0001c0001t0008g0005
a0001c0001t0008g0124
a0001c0001t0008g0135
a0001c0001t0008g0143
a0001c0001t0009g0011
a0001c0001t0009g0012
a0001c0001t0009g0013
a0001c0001t0012g0045
a0001c0001t0012g0142
a0001c0001t0034g0091
a0001c0001t0039g0144
 36 HG00140.hp1
HG00621.hp1
HG00735.hp1
others(33): Show 
HG00140.hp1
HG00621.hp1
HG00735.hp1
HG00741.hp1
HG00741.hp2
HG01069.hp1
HG01071.hp1
HG01192.hp1
HG01256.hp1
HG01433.hp1
HG02074.hp1
HG02083.hp1
HG02145.hp1
HG02572.hp1
HG02735.hp1
HG02809.hp1
HG03041.hp2
HG03139.hp1
HG03486.hp1
HG03491.hp1
HG03492.hp1
NA18612.hp1
NA18943.hp1
NA18944.hp1
NA18966.hp1
NA18986.hp1
NA18990.hp1
NA19000.hp1
NA19004.hp1
NA19012.hp1
NA19055.hp1
NA19070.hp1
NA19076.hp1
NA19086.hp1
NA19091.hp1
homoSapiens_chm13v2.hp1
 intron_variant MODIFIER c.1304-271delA
c.1304-271delA
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 11/21 INFO_REALIGN_3_PRIME chrX 21561182
chrX:21561182 TAA
TAA
 T
T
 28 a0001c0001t0002g0019
a0001c0001t0003g0015
a0001c0001t0004g0129
others(25): Show 
a0001c0001t0002g0019
a0001c0001t0003g0015
a0001c0001t0004g0129
a0001c0001t0006g0155
a0001c0001t0006g0157
a0001c0001t0006g0159
a0001c0001t0006g0160
a0001c0001t0006g0161
a0001c0001t0007g0140
a0001c0001t0009g0010
a0001c0001t0010g0152
a0001c0001t0010g0153
a0001c0001t0011g0016
a0001c0001t0011g0017
a0001c0001t0011g0138
a0001c0001t0013g0066
a0001c0001t0017g0018
a0001c0001t0019g0014
a0001c0001t0020g0141
a0001c0001t0022g0033
a0001c0001t0024g0156
a0001c0001t0027g0034
a0001c0001t0041g0009
a0001c0001t0042g0008
a0001c0001t0043g0007
a0001c0006t0028g0059
a0001c0007t0036g0026
a0003c0004t0006g0154
 28 HG00609.hp1
HG01071.hp2
HG01081.hp1
others(25): Show 
HG00609.hp1
HG01071.hp2
HG01081.hp1
HG01106.hp1
HG01167.hp1
HG01243.hp1
HG01884.hp1
HG01884.hp2
HG02055.hp1
HG02280.hp2
HG02486.hp1
HG02615.hp2
HG02647.hp1
HG02717.hp1
HG02886.hp1
HG02922.hp1
HG02922.hp2
HG02976.hp1
HG03041.hp1
HG03098.hp1
HG03130.hp1
HG03225.hp1
HG03491.hp2
HG03516.hp2
HG03579.hp1
NA18522.hp1
NA19240.hp2
NA20300.hp2
 intron_variant MODIFIER c.1304-272_1304-271d
others(4): Show 
c.1304-272_1304-271delAA
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 11/21 INFO_REALIGN_3_PRIME chrX 21561182
chrX:21561182 TAAA
TAAA
 T
T
 1 a0001c0001t0010g0162
a0001c0001t0010g0162
 1 HG03209.hp1
HG03209.hp1
 intron_variant MODIFIER c.1304-273_1304-271d
others(5): Show 
c.1304-273_1304-271delAAA
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 11/21 INFO_REALIGN_3_PRIME chrX 21561182
chrX:21561270 C
C
 T
T
 3 a0001c0001t0001g0087
a0001c0001t0001g0102
a0001c0001t0001g0103
a0001c0001t0001g0087
a0001c0001t0001g0102
a0001c0001t0001g0103
 3 HG03491.hp1
HG03492.hp1
NA20905.hp1
HG03491.hp1
HG03492.hp1
NA20905.hp1
 intron_variant MODIFIER c.1304-201C>T
c.1304-201C>T
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 11/21 chrX 21561270
chrX:21562003 T
T
 G
G
 1 a0001c0001t0006g0159
a0001c0001t0006g0159
 1 HG02886.hp1
HG02886.hp1
 intron_variant MODIFIER c.1393+443T>G
c.1393+443T>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 12/21 chrX 21562003
chrX:21562028 G
G
 GA
GA
 6 a0001c0001t0002g0112
a0001c0001t0006g0155
a0001c0001t0007g0140
others(3): Show 
a0001c0001t0002g0112
a0001c0001t0006g0155
a0001c0001t0007g0140
a0001c0001t0017g0146
a0001c0001t0020g0141
a0001c0002t0001g0042
 6 HG01109.hp1
HG01243.hp1
HG01433.hp1
others(3): Show 
HG01109.hp1
HG01243.hp1
HG01433.hp1
HG01934.hp1
HG02922.hp1
HG02922.hp2
 intron_variant MODIFIER c.1393+480dupA
c.1393+480dupA
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 12/21 INFO_REALIGN_3_PRIME chrX 21562028
chrX:21562028 GA
GA
 G
G
 1 a0001c0001t0006g0161
a0001c0001t0006g0161
 1 HG02976.hp1
HG02976.hp1
 intron_variant MODIFIER c.1393+480delA
c.1393+480delA
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 12/21 INFO_REALIGN_3_PRIME chrX 21562028
chrX:21562219 ATGG
ATGG
 A
A
 1 a0001c0001t0001g0131
a0001c0001t0001g0131
 1 NA18959.hp1
NA18959.hp1
 intron_variant MODIFIER c.1393+663_1393+665d
others(5): Show 
c.1393+663_1393+665delTGG
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 12/21 INFO_REALIGN_3_PRIME chrX 21562219
chrX:21562268 A
A
 G
G
 1 a0001c0001t0001g0083
a0001c0001t0001g0083
 1 NA20300.hp1
NA20300.hp1
 intron_variant MODIFIER c.1393+708A>G
c.1393+708A>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 12/21 chrX 21562268
chrX:21562365 G
G
 A
A
 1 a0001c0006t0028g0059
a0001c0006t0028g0059
 1 HG03516.hp2
HG03516.hp2
 intron_variant MODIFIER c.1393+805G>A
c.1393+805G>A
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 12/21 chrX 21562365
chrX:21562718 A
A
 G
G
 2 a0001c0001t0003g0116
a0001c0001t0004g0117
a0001c0001t0003g0116
a0001c0001t0004g0117
 2 HG02015.hp1
HG03017.hp1
HG02015.hp1
HG03017.hp1
 intron_variant MODIFIER c.1394-520A>G
c.1394-520A>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 12/21 chrX 21562718
chrX:21563158 C
C
 CTAA
CTAA
 7 a0001c0001t0002g0004
a0001c0001t0003g0031
a0001c0001t0008g0005
others(4): Show 
a0001c0001t0002g0004
a0001c0001t0003g0031
a0001c0001t0008g0005
a0001c0001t0042g0008
a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
 7 HG01069.hp1
HG01071.hp1
HG02615.hp1
others(4): Show 
HG01069.hp1
HG01071.hp1
HG02615.hp1
HG02647.hp1
HG02965.hp1
HG02976.hp2
HG03471.hp1
 intron_variant MODIFIER c.1394-77_1394-75dup
others(3): Show 
c.1394-77_1394-75dupATA
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 12/21 INFO_REALIGN_3_PRIME chrX 21563158
chrX:21563663 T
T
 A
A
 6 a0001c0001t0001g0035
a0001c0001t0001g0052
a0001c0001t0001g0058
others(3): Show 
a0001c0001t0001g0035
a0001c0001t0001g0052
a0001c0001t0001g0058
a0001c0001t0001g0096
a0001c0001t0003g0044
a0001c0001t0030g0086
 6 HG02056.hp1
HG02698.hp1
HG03710.hp1
others(3): Show 
HG02056.hp1
HG02698.hp1
HG03710.hp1
HG03942.hp1
HG04199.hp1
NA19007.hp1
 intron_variant MODIFIER c.1608+211T>A
c.1608+211T>A
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 13/21 chrX 21563663
chrX:21564162 G
G
 GA
GA
 1 a0001c0001t0002g0118
a0001c0001t0002g0118
 1 NA19086.hp1
NA19086.hp1
 intron_variant MODIFIER c.1608+713dupA
c.1608+713dupA
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 13/21 INFO_REALIGN_3_PRIME chrX 21564162
chrX:21564178 A
A
 G
G
 70 a0001c0001t0002g0003
a0001c0001t0002g0004
a0001c0001t0002g0019
others(67): Show 
a0001c0001t0002g0003
a0001c0001t0002g0004
a0001c0001t0002g0019
a0001c0001t0002g0028
a0001c0001t0002g0046
a0001c0001t0002g0047
a0001c0001t0002g0049
a0001c0001t0002g0050
a0001c0001t0002g0110
a0001c0001t0002g0111
a0001c0001t0002g0112
a0001c0001t0002g0113
a0001c0001t0002g0114
a0001c0001t0002g0118
a0001c0001t0002g0119
a0001c0001t0002g0120
a0001c0001t0002g0121
a0001c0001t0002g0122
a0001c0001t0002g0125
a0001c0001t0002g0126
a0001c0001t0003g0015
a0001c0001t0003g0024
a0001c0001t0003g0029
a0001c0001t0003g0031
a0001c0001t0003g0151
a0001c0001t0004g0020
a0001c0001t0006g0155
a0001c0001t0006g0157
a0001c0001t0006g0159
a0001c0001t0006g0160
a0001c0001t0006g0161
a0001c0001t0007g0140
a0001c0001t0008g0005
a0001c0001t0008g0124
a0001c0001t0008g0135
a0001c0001t0008g0143
a0001c0001t0009g0010
a0001c0001t0009g0011
a0001c0001t0009g0012
a0001c0001t0009g0013
a0001c0001t0010g0152
a0001c0001t0010g0153
a0001c0001t0010g0162
a0001c0001t0011g0016
a0001c0001t0011g0017
a0001c0001t0011g0138
a0001c0001t0012g0025
a0001c0001t0012g0045
a0001c0001t0012g0142
a0001c0001t0017g0018
a0001c0001t0017g0146
a0001c0001t0019g0014
a0001c0001t0020g0141
a0001c0001t0022g0033
a0001c0001t0023g0006
a0001c0001t0024g0156
a0001c0001t0027g0034
a0001c0001t0038g0150
a0001c0001t0039g0144
a0001c0001t0040g0027
a0001c0001t0041g0009
a0001c0001t0042g0008
a0001c0001t0043g0007
a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
a0001c0006t0028g0059
a0001c0007t0036g0026
a0002c0005t0003g0030
a0003c0004t0006g0154
 70 HG00140.hp1
HG00621.hp1
HG00735.hp1
others(67): Show 
HG00140.hp1
HG00621.hp1
HG00735.hp1
HG00741.hp2
HG01069.hp1
HG01071.hp1
HG01071.hp2
HG01081.hp1
HG01081.hp2
HG01106.hp1
HG01109.hp1
HG01192.hp1
HG01243.hp1
HG01433.hp1
HG01884.hp1
HG01884.hp2
HG02055.hp1
HG02074.hp1
HG02083.hp1
HG02145.hp1
HG02258.hp1
HG02280.hp1
HG02280.hp2
HG02486.hp1
HG02572.hp1
HG02615.hp1
HG02615.hp2
HG02647.hp1
HG02717.hp1
HG02809.hp1
HG02886.hp1
HG02886.hp2
HG02895.hp1
HG02922.hp1
HG02922.hp2
HG02965.hp1
HG02976.hp1
HG02976.hp2
HG03041.hp1
HG03098.hp1
HG03130.hp1
HG03139.hp1
HG03209.hp1
HG03225.hp1
HG03471.hp1
HG03486.hp1
HG03486.hp2
HG03491.hp2
HG03516.hp2
HG03579.hp1
HG03654.hp1
NA18522.hp1
NA18612.hp1
NA18943.hp1
NA18944.hp1
NA18966.hp1
NA18986.hp1
NA18990.hp1
NA19000.hp1
NA19004.hp1
NA19012.hp1
NA19043.hp1
NA19055.hp1
NA19070.hp1
NA19076.hp1
NA19086.hp1
NA19091.hp1
NA19240.hp1
NA19240.hp2
NA20300.hp2
 intron_variant MODIFIER c.1608+726A>G
c.1608+726A>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 13/21 chrX 21564178
chrX:21564186 A
A
 AG
AG
 1 a0001c0001t0002g0118
a0001c0001t0002g0118
 1 NA19086.hp1
NA19086.hp1
 intron_variant MODIFIER c.1608+735dupG
c.1608+735dupG
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 13/21 INFO_REALIGN_3_PRIME chrX 21564186
chrX:21564206 G
G
 T
T
 1 a0001c0001t0002g0118
a0001c0001t0002g0118
 1 NA19086.hp1
NA19086.hp1
 intron_variant MODIFIER c.1608+754G>T
c.1608+754G>T
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 13/21 chrX 21564206
chrX:21564231 G
G
 A
A
 1 a0001c0001t0002g0019
a0001c0001t0002g0019
 1 HG01106.hp1
HG01106.hp1
 intron_variant MODIFIER c.1608+779G>A
c.1608+779G>A
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 13/21 chrX 21564231
chrX:21564381 A
A
 G
G
 4 a0001c0001t0002g0004
a0001c0001t0003g0031
a0001c0001t0004g0020
others(1): Show 
a0001c0001t0002g0004
a0001c0001t0003g0031
a0001c0001t0004g0020
a0001c0001t0008g0005
 4 HG01069.hp1
HG01071.hp1
HG01192.hp1
others(1): Show 
HG01069.hp1
HG01071.hp1
HG01192.hp1
HG02976.hp2
 intron_variant MODIFIER c.1608+929A>G
c.1608+929A>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 13/21 chrX 21564381
chrX:21564425 A
A
 AC
AC
 1 a0001c0001t0002g0118
a0001c0001t0002g0118
 1 NA19086.hp1
NA19086.hp1
 intron_variant MODIFIER c.1608+973_1608+974i
others(3): Show 
c.1608+973_1608+974insC
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 13/21 chrX 21564425
chrX:21564430 GT
GT
 G
G
 1 a0001c0001t0002g0118
a0001c0001t0002g0118
 1 NA19086.hp1
NA19086.hp1
 intron_variant MODIFIER c.1608+980delT
c.1608+980delT
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 13/21 INFO_REALIGN_3_PRIME chrX 21564430
chrX:21564454 A
A
 C
C
 1 a0001c0001t0015g0098
a0001c0001t0015g0098
 1 HG01952.hp1
HG01952.hp1
 intron_variant MODIFIER c.1608+1002A>C
c.1608+1002A>C
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 13/21 chrX 21564454
chrX:21564502 C
C
 CT
CT
 1 a0001c0001t0002g0118
a0001c0001t0002g0118
 1 NA19086.hp1
NA19086.hp1
 intron_variant MODIFIER c.1608+1051dupT
c.1608+1051dupT
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 13/21 INFO_REALIGN_3_PRIME chrX 21564502
chrX:21564601 A
A
 AT
AT
 1 a0001c0001t0002g0118
a0001c0001t0002g0118
 1 NA19086.hp1
NA19086.hp1
 intron_variant MODIFIER c.1608+1153dupT
c.1608+1153dupT
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 13/21 INFO_REALIGN_3_PRIME chrX 21564601
chrX:21564652 T
T
 TG
TG
 1 a0001c0001t0002g0118
a0001c0001t0002g0118
 1 NA19086.hp1
NA19086.hp1
 intron_variant MODIFIER c.1608+1201dupG
c.1608+1201dupG
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 13/21 INFO_REALIGN_3_PRIME chrX 21564652
chrX:21564732 T
T
 TA
TA
 1 a0001c0001t0002g0118
a0001c0001t0002g0118
 1 NA19086.hp1
NA19086.hp1
 intron_variant MODIFIER c.1608+1284dupA
c.1608+1284dupA
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 13/21 INFO_REALIGN_3_PRIME chrX 21564732
chrX:21564754 GT
GT
 G
G
 25 a0001c0001t0003g0015
a0001c0001t0006g0155
a0001c0001t0006g0157
others(22): Show 
a0001c0001t0003g0015
a0001c0001t0006g0155
a0001c0001t0006g0157
a0001c0001t0006g0159
a0001c0001t0006g0160
a0001c0001t0006g0161
a0001c0001t0007g0140
a0001c0001t0009g0010
a0001c0001t0009g0011
a0001c0001t0009g0012
a0001c0001t0009g0013
a0001c0001t0010g0152
a0001c0001t0010g0153
a0001c0001t0010g0162
a0001c0001t0011g0016
a0001c0001t0011g0017
a0001c0001t0011g0138
a0001c0001t0022g0033
a0001c0001t0024g0156
a0001c0001t0027g0034
a0001c0001t0041g0009
a0001c0001t0043g0007
a0001c0006t0028g0059
a0001c0007t0036g0026
a0003c0004t0006g0154
 25 HG01081.hp1
HG01884.hp1
HG02055.hp1
others(22): Show 
HG01081.hp1
HG01884.hp1
HG02055.hp1
HG02280.hp2
HG02486.hp1
HG02572.hp1
HG02615.hp2
HG02717.hp1
HG02809.hp1
HG02886.hp1
HG02922.hp1
HG02922.hp2
HG02976.hp1
HG03041.hp1
HG03098.hp1
HG03130.hp1
HG03209.hp1
HG03225.hp1
HG03486.hp1
HG03491.hp2
HG03516.hp2
HG03579.hp1
NA18522.hp1
NA19240.hp2
NA20300.hp2
 intron_variant MODIFIER c.1608+1313delT
c.1608+1313delT
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 13/21 INFO_REALIGN_3_PRIME chrX 21564754
chrX:21564833 T
T
 TC
TC
 1 a0001c0001t0002g0118
a0001c0001t0002g0118
 1 NA19086.hp1
NA19086.hp1
 intron_variant MODIFIER c.1608+1382dupC
c.1608+1382dupC
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 13/21 INFO_REALIGN_3_PRIME chrX 21564833
chrX:21565123 C
C
 T
T
 1 a0001c0001t0001g0073
a0001c0001t0001g0073
 1 HG01515.hp1
HG01515.hp1
 intron_variant MODIFIER c.1608+1671C>T
c.1608+1671C>T
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 13/21 chrX 21565123
chrX:21565371 G
G
 A
A
 3 a0001c0001t0002g0004
a0001c0001t0004g0020
a0001c0001t0008g0005
a0001c0001t0002g0004
a0001c0001t0004g0020
a0001c0001t0008g0005
 3 HG01069.hp1
HG01071.hp1
HG01192.hp1
HG01069.hp1
HG01071.hp1
HG01192.hp1
 intron_variant MODIFIER c.1608+1919G>A
c.1608+1919G>A
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 13/21 chrX 21565371
chrX:21565608 T
T
 C
C
 1 a0001c0001t0042g0008
a0001c0001t0042g0008
 1 HG02647.hp1
HG02647.hp1
 intron_variant MODIFIER c.1608+2156T>C
c.1608+2156T>C
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 13/21 chrX 21565608
chrX:21566099 A
A
 AT
AT
 36 a0001c0001t0002g0004
a0001c0001t0003g0015
a0001c0001t0003g0031
others(33): Show 
a0001c0001t0002g0004
a0001c0001t0003g0015
a0001c0001t0003g0031
a0001c0001t0006g0155
a0001c0001t0006g0157
a0001c0001t0006g0159
a0001c0001t0006g0160
a0001c0001t0006g0161
a0001c0001t0007g0140
a0001c0001t0008g0005
a0001c0001t0009g0010
a0001c0001t0009g0011
a0001c0001t0009g0012
a0001c0001t0009g0013
a0001c0001t0010g0152
a0001c0001t0010g0153
a0001c0001t0010g0162
a0001c0001t0011g0016
a0001c0001t0011g0017
a0001c0001t0011g0138
a0001c0001t0017g0018
a0001c0001t0019g0014
a0001c0001t0020g0141
a0001c0001t0022g0033
a0001c0001t0023g0006
a0001c0001t0024g0156
a0001c0001t0027g0034
a0001c0001t0041g0009
a0001c0001t0042g0008
a0001c0001t0043g0007
a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
a0001c0006t0028g0059
a0001c0007t0036g0026
a0003c0004t0006g0154
 36 HG01069.hp1
HG01071.hp1
HG01071.hp2
others(33): Show 
HG01069.hp1
HG01071.hp1
HG01071.hp2
HG01081.hp1
HG01243.hp1
HG01884.hp1
HG01884.hp2
HG02055.hp1
HG02280.hp2
HG02486.hp1
HG02572.hp1
HG02615.hp1
HG02615.hp2
HG02647.hp1
HG02717.hp1
HG02809.hp1
HG02886.hp1
HG02922.hp1
HG02922.hp2
HG02965.hp1
HG02976.hp1
HG02976.hp2
HG03041.hp1
HG03098.hp1
HG03130.hp1
HG03209.hp1
HG03225.hp1
HG03471.hp1
HG03486.hp1
HG03491.hp2
HG03516.hp2
HG03579.hp1
HG03654.hp1
NA18522.hp1
NA19240.hp2
NA20300.hp2
 intron_variant MODIFIER c.1608+2650dupT
c.1608+2650dupT
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 13/21 INFO_REALIGN_3_PRIME chrX 21566099
chrX:21566145 G
G
 A
A
 1 a0001c0007t0036g0026
a0001c0007t0036g0026
 1 HG01081.hp1
HG01081.hp1
 intron_variant MODIFIER c.1608+2693G>A
c.1608+2693G>A
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 13/21 chrX 21566145
chrX:21566169 A
A
 T
T
 3 a0001c0001t0005g0079
a0001c0001t0005g0095
a0001c0001t0005g0099
a0001c0001t0005g0079
a0001c0001t0005g0095
a0001c0001t0005g0099
 3 NA18747.hp1
NA18960.hp1
NA18961.hp1
NA18747.hp1
NA18960.hp1
NA18961.hp1
 intron_variant MODIFIER c.1608+2717A>T
c.1608+2717A>T
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 13/21 chrX 21566169
chrX:21566263 G
G
 C
C
 4 a0001c0001t0002g0004
a0001c0001t0003g0031
a0001c0001t0008g0005
others(1): Show 
a0001c0001t0002g0004
a0001c0001t0003g0031
a0001c0001t0008g0005
a0001c0001t0042g0008
 4 HG01069.hp1
HG01071.hp1
HG02647.hp1
others(1): Show 
HG01069.hp1
HG01071.hp1
HG02647.hp1
HG02976.hp2
 intron_variant MODIFIER c.1608+2811G>C
c.1608+2811G>C
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 13/21 chrX 21566263
chrX:21566499 T
T
 G
G
 2 a0001c0001t0009g0010
a0001c0001t0041g0009
a0001c0001t0009g0010
a0001c0001t0041g0009
 2 HG02280.hp2
HG03098.hp1
HG02280.hp2
HG03098.hp1
 intron_variant MODIFIER c.1608+3047T>G
c.1608+3047T>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 13/21 chrX 21566499
chrX:21567067 G
G
 T
T
 1 a0001c0001t0012g0025
a0001c0001t0012g0025
 1 HG03486.hp2
HG03486.hp2
 intron_variant MODIFIER c.1608+3615G>T
c.1608+3615G>T
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 13/21 chrX 21567067
chrX:21567359 T
T
 C
C
 1 a0001c0001t0012g0142
a0001c0001t0012g0142
 1 HG03139.hp1
HG03139.hp1
 intron_variant MODIFIER c.1608+3907T>C
c.1608+3907T>C
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 13/21 chrX 21567359
chrX:21567792 TGTG
TGTG
 T
T
 1 a0001c0001t0001g0134
a0001c0001t0001g0134
 1 HG02071.hp1
HG02071.hp1
 intron_variant MODIFIER c.1608+4344_1608+434
others(7): Show 
c.1608+4344_1608+4346delGTG
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 13/21 INFO_REALIGN_3_PRIME chrX 21567792
chrX:21567795 G
G
 GGT
GGT
 1 a0001c0001t0041g0009
a0001c0001t0041g0009
 1 HG03098.hp1
HG03098.hp1
 intron_variant MODIFIER c.1608+4388_1608+438
others(6): Show 
c.1608+4388_1608+4389dupGT
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 13/21 INFO_REALIGN_3_PRIME chrX 21567795
chrX:21567795 G
G
 GGTGT
GGTGT
 4 a0001c0001t0001g0096
a0001c0001t0009g0013
a0001c0001t0019g0014
others(1): Show 
a0001c0001t0001g0096
a0001c0001t0009g0013
a0001c0001t0019g0014
a0001c0001t0030g0086
 4 HG01884.hp2
HG03486.hp1
HG03710.hp1
others(1): Show 
HG01884.hp2
HG03486.hp1
HG03710.hp1
HG04199.hp1
 intron_variant MODIFIER c.1608+4386_1608+438
others(8): Show 
c.1608+4386_1608+4389dupGTGT
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 13/21 INFO_REALIGN_3_PRIME chrX 21567795
chrX:21567795 G
G
 GGTGTGT
GGTGTGT
 1 a0001c0001t0002g0126
a0001c0001t0002g0126
 1 NA18943.hp1
NA18943.hp1
 intron_variant MODIFIER c.1608+4384_1608+438
others(10): Show 
c.1608+4384_1608+4389dupGTGTGT
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 13/21 INFO_REALIGN_3_PRIME chrX 21567795
chrX:21567795 G
G
 GGTGTGTG
others(3): Show 
GGTGTGTGTGT
 1 a0001c0001t0011g0016
a0001c0001t0011g0016
 1 NA18522.hp1
NA18522.hp1
 intron_variant MODIFIER c.1608+4380_1608+438
others(14): Show 
c.1608+4380_1608+4389dupGTGTGTGTGT
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 13/21 INFO_REALIGN_3_PRIME chrX 21567795
chrX:21567795 G
G
 GGTT
GGTT
 3 a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
 3 HG02615.hp1
HG02965.hp1
HG03471.hp1
HG02615.hp1
HG02965.hp1
HG03471.hp1
 intron_variant MODIFIER c.1608+4345_1608+434
others(7): Show 
c.1608+4345_1608+4346insTGT
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 13/21 INFO_REALIGN_3_PRIME chrX 21567795
chrX:21567795 GGT
GGT
 G
G
 29 a0001c0001t0001g0048
a0001c0001t0001g0062
a0001c0001t0001g0069
others(26): Show 
a0001c0001t0001g0048
a0001c0001t0001g0062
a0001c0001t0001g0069
a0001c0001t0001g0077
a0001c0001t0001g0097
a0001c0001t0001g0109
a0001c0001t0002g0004
a0001c0001t0002g0043
a0001c0001t0002g0049
a0001c0001t0002g0050
a0001c0001t0003g0136
a0001c0001t0004g0132
a0001c0001t0006g0155
a0001c0001t0007g0140
a0001c0001t0008g0005
a0001c0001t0008g0135
a0001c0001t0008g0143
a0001c0001t0010g0152
a0001c0001t0010g0153
a0001c0001t0010g0162
a0001c0001t0012g0045
a0001c0001t0017g0018
a0001c0001t0022g0033
a0001c0001t0024g0156
a0001c0001t0029g0023
a0001c0001t0033g0002
a0001c0001t0034g0091
a0001c0001t0039g0144
a0001c0007t0036g0026
 29 HG00673.hp1
HG00735.hp2
HG01069.hp1
others(26): Show 
HG00673.hp1
HG00735.hp2
HG01069.hp1
HG01071.hp1
HG01071.hp2
HG01081.hp1
HG01099.hp1
HG02055.hp1
HG02145.hp1
HG02735.hp1
HG02738.hp1
HG02809.hp2
HG02922.hp1
HG02922.hp2
HG03209.hp1
HG03225.hp1
HG04228.hp1
NA18944.hp1
NA18965.hp1
NA18986.hp1
NA18988.hp1
NA19000.hp1
NA19004.hp1
NA19006.hp1
NA19055.hp1
NA19085.hp1
NA19240.hp2
NA20300.hp2
NA20752.hp1
 intron_variant MODIFIER c.1608+4388_1608+438
others(6): Show 
c.1608+4388_1608+4389delGT
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 13/21 INFO_REALIGN_3_PRIME chrX 21567795
chrX:21567795 GGTGT
GGTGT
 G
G
 57 a0001c0001t0001g0035
a0001c0001t0001g0036
a0001c0001t0001g0037
others(54): Show 
a0001c0001t0001g0035
a0001c0001t0001g0036
a0001c0001t0001g0037
a0001c0001t0001g0051
a0001c0001t0001g0053
a0001c0001t0001g0060
a0001c0001t0001g0067
a0001c0001t0001g0071
a0001c0001t0001g0073
a0001c0001t0001g0075
a0001c0001t0001g0076
a0001c0001t0001g0087
a0001c0001t0001g0093
a0001c0001t0001g0102
a0001c0001t0001g0103
a0001c0001t0001g0131
a0001c0001t0001g0137
a0001c0001t0001g0158
a0001c0001t0002g0003
a0001c0001t0002g0046
a0001c0001t0002g0110
a0001c0001t0002g0118
a0001c0001t0002g0119
a0001c0001t0002g0120
a0001c0001t0002g0122
a0001c0001t0003g0029
a0001c0001t0003g0044
a0001c0001t0003g0061
a0001c0001t0003g0116
a0001c0001t0003g0133
a0001c0001t0004g0020
a0001c0001t0004g0055
a0001c0001t0004g0056
a0001c0001t0004g0064
a0001c0001t0004g0117
a0001c0001t0004g0129
a0001c0001t0005g0063
a0001c0001t0005g0072
a0001c0001t0006g0157
a0001c0001t0006g0159
a0001c0001t0006g0160
a0001c0001t0006g0161
a0001c0001t0008g0124
a0001c0001t0009g0010
a0001c0001t0013g0066
a0001c0001t0015g0038
a0001c0001t0015g0098
a0001c0001t0016g0032
a0001c0001t0018g0123
a0001c0001t0020g0141
a0001c0001t0021g0088
a0001c0001t0023g0006
a0001c0001t0025g0130
a0001c0001t0031g0065
a0001c0001t0037g0092
a0001c0002t0007g0040
a0001c0006t0028g0059
 57 HG00280.hp1
HG00609.hp1
HG00621.hp1
others(54): Show 
HG00280.hp1
HG00609.hp1
HG00621.hp1
HG00738.hp1
HG00741.hp1
HG01074.hp1
HG01167.hp1
HG01192.hp1
HG01243.hp1
HG01258.hp1
HG01358.hp1
HG01515.hp1
HG01952.hp1
HG02015.hp1
HG02027.hp1
HG02040.hp1
HG02056.hp1
HG02074.hp1
HG02083.hp1
HG02135.hp1
HG02280.hp2
HG02602.hp1
HG02615.hp2
HG02886.hp1
HG02895.hp1
HG02976.hp1
HG03017.hp1
HG03041.hp2
HG03130.hp1
HG03490.hp1
HG03491.hp1
HG03492.hp1
HG03516.hp1
HG03516.hp2
HG03654.hp1
HG03688.hp1
HG03942.hp1
HG04115.hp1
HG04204.hp1
NA18945.hp1
NA18948.hp1
NA18952.hp1
NA18953.hp1
NA18959.hp1
NA18962.hp1
NA18966.hp1
NA18970.hp1
NA18982.hp1
NA18990.hp1
NA19012.hp1
NA19058.hp1
NA19060.hp1
NA19062.hp1
NA19070.hp1
NA19086.hp1
NA20805.hp1
NA20905.hp1
 intron_variant MODIFIER c.1608+4386_1608+438
others(8): Show 
c.1608+4386_1608+4389delGTGT
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 13/21 INFO_REALIGN_3_PRIME chrX 21567795
chrX:21567795 GGTGTGT
GGTGTGT
 G
G
 35 a0001c0001t0001g0001
a0001c0001t0001g0039
a0001c0001t0001g0052
others(32): Show 
a0001c0001t0001g0001
a0001c0001t0001g0039
a0001c0001t0001g0052
a0001c0001t0001g0078
a0001c0001t0001g0080
a0001c0001t0001g0081
a0001c0001t0001g0082
a0001c0001t0001g0083
a0001c0001t0001g0084
a0001c0001t0001g0089
a0001c0001t0001g0090
a0001c0001t0001g0094
a0001c0001t0001g0128
a0001c0001t0001g0145
a0001c0001t0002g0047
a0001c0001t0002g0115
a0001c0001t0003g0070
a0001c0001t0004g0021
a0001c0001t0004g0057
a0001c0001t0005g0079
a0001c0001t0005g0095
a0001c0001t0005g0099
a0001c0001t0007g0022
a0001c0001t0007g0127
a0001c0001t0012g0142
a0001c0001t0016g0085
a0001c0001t0032g0163
a0001c0001t0035g0054
a0001c0002t0001g0042
a0001c0002t0001g0104
a0001c0002t0001g0105
a0001c0002t0001g0107
a0001c0002t0001g0108
a0001c0002t0005g0106
a0001c0002t0007g0041
 35 HG00642.hp1
HG01255.hp1
HG01256.hp1
others(32): Show 
HG00642.hp1
HG01255.hp1
HG01256.hp1
HG01261.hp1
HG01928.hp1
HG01934.hp1
HG01943.hp1
HG02129.hp1
HG02132.hp1
HG02300.hp1
HG03139.hp1
NA18747.hp1
NA18960.hp1
NA18961.hp1
NA18967.hp1
NA18971.hp1
NA18974.hp1
NA18977.hp1
NA18984.hp1
NA18994.hp1
NA19005.hp1
NA19007.hp1
NA19009.hp1
NA19056.hp1
NA19063.hp1
NA19066.hp1
NA19068.hp1
NA19072.hp1
NA19076.hp1
NA19079.hp1
NA19082.hp1
NA19088.hp1
NA19089.hp1
NA20300.hp1
homoSapiens_chm13v2.hp1
 intron_variant MODIFIER c.1608+4384_1608+438
others(10): Show 
c.1608+4384_1608+4389delGTGTGT
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 13/21 INFO_REALIGN_3_PRIME chrX 21567795
chrX:21567795 GGTGTGTG
others(1): Show 
GGTGTGTGT
 G
G
 7 a0001c0001t0002g0019
a0001c0001t0002g0111
a0001c0001t0002g0112
others(4): Show 
a0001c0001t0002g0019
a0001c0001t0002g0111
a0001c0001t0002g0112
a0001c0001t0002g0113
a0001c0001t0002g0114
a0001c0001t0043g0007
a0002c0005t0003g0030
 7 HG00140.hp1
HG00735.hp1
HG00741.hp2
others(4): Show 
HG00140.hp1
HG00735.hp1
HG00741.hp2
HG01106.hp1
HG01433.hp1
HG02886.hp2
HG03491.hp2
 intron_variant MODIFIER c.1608+4382_1608+438
others(12): Show 
c.1608+4382_1608+4389delGTGTGTGT
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 13/21 INFO_REALIGN_3_PRIME chrX 21567795
chrX:21567795 GGTGTGTG
others(3): Show 
GGTGTGTGTGT
 G
G
 8 a0001c0001t0002g0028
a0001c0001t0003g0024
a0001c0001t0003g0101
others(5): Show 
a0001c0001t0002g0028
a0001c0001t0003g0024
a0001c0001t0003g0101
a0001c0001t0003g0151
a0001c0001t0012g0025
a0001c0001t0017g0146
a0001c0001t0038g0150
a0001c0001t0040g0027
 8 HG01081.hp2
HG01109.hp1
HG02258.hp1
others(5): Show 
HG01081.hp2
HG01109.hp1
HG02258.hp1
HG02280.hp1
HG03486.hp2
NA18995.hp1
NA19043.hp1
NA19240.hp1
 intron_variant MODIFIER c.1608+4380_1608+438
others(14): Show 
c.1608+4380_1608+4389delGTGTGTGTGT
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 13/21 INFO_REALIGN_3_PRIME chrX 21567795
chrX:21567891 T
T
 C
C
 1 a0001c0001t0043g0007
a0001c0001t0043g0007
 1 HG03491.hp2
HG03491.hp2
 intron_variant MODIFIER c.1608+4439T>C
c.1608+4439T>C
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 13/21 chrX 21567891
chrX:21567899 A
A
 T
T
 1 a0001c0001t0010g0153
a0001c0001t0010g0153
 1 NA19240.hp2
NA19240.hp2
 intron_variant MODIFIER c.1608+4447A>T
c.1608+4447A>T
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 13/21 chrX 21567899
chrX:21567922 T
T
 C
C
 1 a0001c0001t0017g0018
a0001c0001t0017g0018
 1 HG01071.hp2
HG01071.hp2
 intron_variant MODIFIER c.1608+4470T>C
c.1608+4470T>C
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 13/21 chrX 21567922
chrX:21568205 T
T
 C
C
 1 a0001c0001t0001g0058
a0001c0001t0001g0058
 1 HG02698.hp1
HG02698.hp1
 intron_variant MODIFIER c.1608+4753T>C
c.1608+4753T>C
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 13/21 chrX 21568205
chrX:21568351 C
C
 T
T
 2 a0001c0001t0002g0112
a0001c0001t0002g0113
a0001c0001t0002g0112
a0001c0001t0002g0113
 2 HG00735.hp1
HG01433.hp1
HG00735.hp1
HG01433.hp1
 intron_variant MODIFIER c.1608+4899C>T
c.1608+4899C>T
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 13/21 chrX 21568351
chrX:21568585 G
G
 A
A
 2 a0001c0001t0002g0004
a0001c0001t0008g0005
a0001c0001t0002g0004
a0001c0001t0008g0005
 2 HG01069.hp1
HG01071.hp1
HG01069.hp1
HG01071.hp1
 intron_variant MODIFIER c.1608+5133G>A
c.1608+5133G>A
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 13/21 chrX 21568585
chrX:21568646 TA
TA
 T
T
 1 a0001c0001t0012g0045
a0001c0001t0012g0045
 1 HG02145.hp1
HG02145.hp1
 intron_variant MODIFIER c.1608+5195delA
c.1608+5195delA
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 13/21 chrX 21568646
chrX:21569114 T
T
 C
C
 3 a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
 3 HG02615.hp1
HG02965.hp1
HG03471.hp1
HG02615.hp1
HG02965.hp1
HG03471.hp1
 intron_variant MODIFIER c.1608+5662T>C
c.1608+5662T>C
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 13/21 chrX 21569114
chrX:21569210 G
G
 GTTA
GTTA
 4 a0001c0001t0042g0008
a0001c0003t0014g0147
a0001c0003t0014g0149
others(1): Show 
a0001c0001t0042g0008
a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
 4 HG02615.hp1
HG02647.hp1
HG02965.hp1
others(1): Show 
HG02615.hp1
HG02647.hp1
HG02965.hp1
HG03471.hp1
 intron_variant MODIFIER c.1608+5779_1608+578
others(7): Show 
c.1608+5779_1608+5781dupATT
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 13/21 INFO_REALIGN_3_PRIME chrX 21569210
chrX:21569210 GTTA
GTTA
 G
G
 1 a0001c0007t0036g0026
a0001c0007t0036g0026
 1 HG01081.hp1
HG01081.hp1
 intron_variant MODIFIER c.1608+5779_1608+578
others(7): Show 
c.1608+5779_1608+5781delATT
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 13/21 INFO_REALIGN_3_PRIME chrX 21569210
chrX:21569218 T
T
 G
G
 1 a0001c0001t0002g0043
a0001c0001t0002g0043
 1 HG02809.hp2
HG02809.hp2
 intron_variant MODIFIER c.1608+5766T>G
c.1608+5766T>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 13/21 chrX 21569218
chrX:21569508 C
C
 T
T
 1 a0001c0001t0001g0093
a0001c0001t0001g0093
 1 NA20805.hp1
NA20805.hp1
 intron_variant MODIFIER c.1608+6056C>T
c.1608+6056C>T
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 13/21 chrX 21569508
chrX:21569515 A
A
 G
G
 1 a0001c0001t0042g0008
a0001c0001t0042g0008
 1 HG02647.hp1
HG02647.hp1
 intron_variant MODIFIER c.1608+6063A>G
c.1608+6063A>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 13/21 chrX 21569515
chrX:21570271 C
C
 G
G
 1 a0001c0001t0016g0085
a0001c0001t0016g0085
 1 HG02300.hp1
HG02300.hp1
 intron_variant MODIFIER c.1608+6819C>G
c.1608+6819C>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 13/21 chrX 21570271
chrX:21570706 G
G
 C
C
 3 a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
 3 HG02615.hp1
HG02965.hp1
HG03471.hp1
HG02615.hp1
HG02965.hp1
HG03471.hp1
 intron_variant MODIFIER c.1608+7254G>C
c.1608+7254G>C
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 13/21 chrX 21570706
chrX:21570767 C
C
 T
T
 1 a0001c0001t0003g0031
a0001c0001t0003g0031
 1 HG02976.hp2
HG02976.hp2
 intron_variant MODIFIER c.1608+7315C>T
c.1608+7315C>T
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 13/21 chrX 21570767
chrX:21570974 T
T
 C
C
 1 a0001c0001t0042g0008
a0001c0001t0042g0008
 1 HG02647.hp1
HG02647.hp1
 intron_variant MODIFIER c.1608+7522T>C
c.1608+7522T>C
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 13/21 chrX 21570974
chrX:21571313 A
A
 G
G
 1 a0001c0001t0038g0150
a0001c0001t0038g0150
 1 NA19240.hp1
NA19240.hp1
 intron_variant MODIFIER c.1608+7861A>G
c.1608+7861A>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 13/21 chrX 21571313
chrX:21571467 A
A
 G
G
 1 a0001c0001t0002g0019
a0001c0001t0002g0019
 1 HG01106.hp1
HG01106.hp1
 intron_variant MODIFIER c.1608+8015A>G
c.1608+8015A>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 13/21 chrX 21571467
chrX:21571684 A
A
 G
G
 2 a0001c0001t0001g0102
a0001c0001t0001g0103
a0001c0001t0001g0102
a0001c0001t0001g0103
 2 HG03491.hp1
HG03492.hp1
HG03491.hp1
HG03492.hp1
 intron_variant MODIFIER c.1608+8232A>G
c.1608+8232A>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 13/21 chrX 21571684
chrX:21572131 A
A
 G
G
 1 a0001c0001t0024g0156
a0001c0001t0024g0156
 1 NA20300.hp2
NA20300.hp2
 intron_variant MODIFIER c.1608+8679A>G
c.1608+8679A>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 13/21 chrX 21572131
chrX:21572329 A
A
 G
G
 3 a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
 3 HG02615.hp1
HG02965.hp1
HG03471.hp1
HG02615.hp1
HG02965.hp1
HG03471.hp1
 intron_variant MODIFIER c.1608+8877A>G
c.1608+8877A>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 13/21 chrX 21572329
chrX:21572624 C
C
 G
G
 3 a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
 3 HG02615.hp1
HG02965.hp1
HG03471.hp1
HG02615.hp1
HG02965.hp1
HG03471.hp1
 intron_variant MODIFIER c.1608+9172C>G
c.1608+9172C>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 13/21 chrX 21572624
chrX:21572792 A
A
 G
G
 11 a0001c0001t0003g0031
a0001c0001t0006g0157
a0001c0001t0006g0159
others(8): Show 
a0001c0001t0003g0031
a0001c0001t0006g0157
a0001c0001t0006g0159
a0001c0001t0006g0160
a0001c0001t0006g0161
a0001c0001t0010g0152
a0001c0001t0010g0153
a0001c0001t0010g0162
a0001c0001t0024g0156
a0001c0006t0028g0059
a0003c0004t0006g0154
 11 HG01884.hp1
HG02615.hp2
HG02886.hp1
others(8): Show 
HG01884.hp1
HG02615.hp2
HG02886.hp1
HG02976.hp1
HG02976.hp2
HG03130.hp1
HG03209.hp1
HG03225.hp1
HG03516.hp2
NA19240.hp2
NA20300.hp2
 intron_variant MODIFIER c.1608+9340A>G
c.1608+9340A>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 13/21 chrX 21572792
chrX:21573050 C
C
 G
G
 2 a0001c0002t0001g0107
a0001c0002t0001g0108
a0001c0002t0001g0107
a0001c0002t0001g0108
 2 NA18984.hp1
NA19056.hp1
NA18984.hp1
NA19056.hp1
 intron_variant MODIFIER c.1608+9598C>G
c.1608+9598C>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 13/21 chrX 21573050
chrX:21573436 C
C
 T
T
 3 a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
 3 HG02615.hp1
HG02965.hp1
HG03471.hp1
HG02615.hp1
HG02965.hp1
HG03471.hp1
 intron_variant MODIFIER c.1608+9984C>T
c.1608+9984C>T
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 13/21 chrX 21573436
chrX:21573497 G
G
 A
A
 2 a0001c0001t0002g0125
a0001c0001t0002g0126
a0001c0001t0002g0125
a0001c0001t0002g0126
 2 NA18943.hp1
NA19091.hp1
NA18943.hp1
NA19091.hp1
 intron_variant MODIFIER c.1608+10045G>A
c.1608+10045G>A
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 13/21 chrX 21573497
chrX:21574555 G
G
 T
T
 3 a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
 3 HG02615.hp1
HG02965.hp1
HG03471.hp1
HG02615.hp1
HG02965.hp1
HG03471.hp1
 intron_variant MODIFIER c.1608+11103G>T
c.1608+11103G>T
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 13/21 chrX 21574555
chrX:21574764 G
G
 A
A
 11 a0001c0001t0006g0157
a0001c0001t0006g0159
a0001c0001t0006g0160
others(8): Show 
a0001c0001t0006g0157
a0001c0001t0006g0159
a0001c0001t0006g0160
a0001c0001t0006g0161
a0001c0001t0010g0152
a0001c0001t0010g0153
a0001c0001t0010g0162
a0001c0001t0024g0156
a0001c0006t0028g0059
a0001c0007t0036g0026
a0003c0004t0006g0154
 11 HG01081.hp1
HG01884.hp1
HG02615.hp2
others(8): Show 
HG01081.hp1
HG01884.hp1
HG02615.hp2
HG02886.hp1
HG02976.hp1
HG03130.hp1
HG03209.hp1
HG03225.hp1
HG03516.hp2
NA19240.hp2
NA20300.hp2
 intron_variant MODIFIER c.1608+11312G>A
c.1608+11312G>A
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 13/21 chrX 21574764
chrX:21575222 A
A
 G
G
 2 a0001c0001t0007g0140
a0001c0001t0020g0141
a0001c0001t0007g0140
a0001c0001t0020g0141
 2 HG01243.hp1
HG02922.hp1
HG01243.hp1
HG02922.hp1
 intron_variant MODIFIER c.1608+11770A>G
c.1608+11770A>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 13/21 chrX 21575222
chrX:21575279 T
T
 C
C
 1 a0001c0002t0007g0040
a0001c0002t0007g0040
 1 HG02027.hp1
HG02027.hp1
 intron_variant MODIFIER c.1608+11827T>C
c.1608+11827T>C
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 13/21 chrX 21575279
chrX:21575364 TC
TC
 T
T
 1 a0001c0001t0008g0005
a0001c0001t0008g0005
 1 HG01069.hp1
HG01069.hp1
 intron_variant MODIFIER c.1608+11918delC
c.1608+11918delC
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 13/21 INFO_REALIGN_3_PRIME chrX 21575364
chrX:21575518 A
A
 G
G
 1 a0001c0001t0003g0031
a0001c0001t0003g0031
 1 HG02976.hp2
HG02976.hp2
 intron_variant MODIFIER c.1608+12066A>G
c.1608+12066A>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 13/21 chrX 21575518
chrX:21575523 T
T
 C
C
 3 a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
 3 HG02615.hp1
HG02965.hp1
HG03471.hp1
HG02615.hp1
HG02965.hp1
HG03471.hp1
 intron_variant MODIFIER c.1608+12071T>C
c.1608+12071T>C
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 13/21 chrX 21575523
chrX:21575968 C
C
 G
G
 2 a0001c0001t0007g0140
a0001c0001t0020g0141
a0001c0001t0007g0140
a0001c0001t0020g0141
 2 HG01243.hp1
HG02922.hp1
HG01243.hp1
HG02922.hp1
 intron_variant MODIFIER c.1608+12516C>G
c.1608+12516C>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 13/21 chrX 21575968
chrX:21576268 G
G
 A
A
 1 a0001c0001t0001g0053
a0001c0001t0001g0053
 1 HG00280.hp1
HG00280.hp1
 intron_variant MODIFIER c.1608+12816G>A
c.1608+12816G>A
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 13/21 chrX 21576268
chrX:21576753 G
G
 A
A
 1 a0001c0001t0001g0071
a0001c0001t0001g0071
 1 NA18945.hp1
NA18945.hp1
 intron_variant MODIFIER c.1608+13301G>A
c.1608+13301G>A
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 13/21 chrX 21576753
chrX:21576876 T
T
 C
C
 3 a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
 3 HG02615.hp1
HG02965.hp1
HG03471.hp1
HG02615.hp1
HG02965.hp1
HG03471.hp1
 intron_variant MODIFIER c.1608+13424T>C
c.1608+13424T>C
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 13/21 chrX 21576876
chrX:21577112 C
C
 T
T
 2 a0001c0001t0001g0060
a0001c0001t0001g0158
a0001c0001t0001g0060
a0001c0001t0001g0158
 2 HG03041.hp2
HG03516.hp1
HG03041.hp2
HG03516.hp1
 intron_variant MODIFIER c.1609-13460C>T
c.1609-13460C>T
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 13/21 chrX 21577112
chrX:21577139 A
A
 C
C
 1 a0001c0001t0042g0008
a0001c0001t0042g0008
 1 HG02647.hp1
HG02647.hp1
 intron_variant MODIFIER c.1609-13433A>C
c.1609-13433A>C
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 13/21 chrX 21577139
chrX:21577624 C
C
 CT
CT
 1 a0001c0001t0042g0008
a0001c0001t0042g0008
 1 HG02647.hp1
HG02647.hp1
 intron_variant MODIFIER c.1609-12939dupT
c.1609-12939dupT
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 13/21 INFO_REALIGN_3_PRIME chrX 21577624
chrX:21578370 A
A
 G
G
 1 a0001c0001t0001g0087
a0001c0001t0001g0087
 1 NA20905.hp1
NA20905.hp1
 intron_variant MODIFIER c.1609-12202A>G
c.1609-12202A>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 13/21 chrX 21578370
chrX:21578549 G
G
 GT
GT
 12 a0001c0001t0001g0051
a0001c0001t0001g0053
a0001c0001t0001g0080
others(9): Show 
a0001c0001t0001g0051
a0001c0001t0001g0053
a0001c0001t0001g0080
a0001c0001t0001g0081
a0001c0001t0004g0055
a0001c0001t0005g0063
a0001c0001t0005g0072
a0001c0001t0007g0127
a0001c0001t0007g0140
a0001c0001t0020g0141
a0001c0001t0021g0088
a0001c0001t0022g0033
 12 HG00280.hp1
HG01074.hp1
HG01243.hp1
others(9): Show 
HG00280.hp1
HG01074.hp1
HG01243.hp1
HG01255.hp1
HG01258.hp1
HG02055.hp1
HG02922.hp1
NA18962.hp1
NA19058.hp1
NA19060.hp1
NA19072.hp1
NA19089.hp1
 intron_variant MODIFIER c.1609-12007dupT
c.1609-12007dupT
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 13/21 INFO_REALIGN_3_PRIME chrX 21578549
chrX:21578549 G
G
 GTT
GTT
 1 a0001c0001t0027g0034
a0001c0001t0027g0034
 1 HG02486.hp1
HG02486.hp1
 intron_variant MODIFIER c.1609-12008_1609-12
others(8): Show 
c.1609-12008_1609-12007dupTT
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 13/21 INFO_REALIGN_3_PRIME chrX 21578549
chrX:21578549 GT
GT
 G
G
 27 a0001c0001t0001g0037
a0001c0001t0001g0039
a0001c0001t0001g0067
others(24): Show 
a0001c0001t0001g0037
a0001c0001t0001g0039
a0001c0001t0001g0067
a0001c0001t0001g0073
a0001c0001t0001g0082
a0001c0001t0001g0083
a0001c0001t0001g0084
a0001c0001t0001g0137
a0001c0001t0002g0003
a0001c0001t0002g0004
a0001c0001t0002g0019
a0001c0001t0002g0110
a0001c0001t0002g0119
a0001c0001t0003g0031
a0001c0001t0006g0157
a0001c0001t0006g0159
a0001c0001t0008g0005
a0001c0001t0009g0011
a0001c0001t0009g0012
a0001c0001t0009g0013
a0001c0001t0010g0152
a0001c0001t0010g0153
a0001c0001t0010g0162
a0001c0001t0012g0045
a0001c0001t0013g0100
a0001c0002t0001g0107
a0001c0006t0028g0059
 27 HG00621.hp1
HG00642.hp1
HG01069.hp1
others(24): Show 
HG00621.hp1
HG00642.hp1
HG01069.hp1
HG01071.hp1
HG01106.hp1
HG01261.hp1
HG01515.hp1
HG01928.hp1
HG02074.hp1
HG02135.hp1
HG02145.hp1
HG02572.hp1
HG02809.hp1
HG02886.hp1
HG02976.hp2
HG03130.hp1
HG03209.hp1
HG03225.hp1
HG03486.hp1
HG03490.hp1
HG03516.hp2
NA18952.hp1
NA18955.hp1
NA18966.hp1
NA18984.hp1
NA19240.hp2
NA20300.hp1
 intron_variant MODIFIER c.1609-12007delT
c.1609-12007delT
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 13/21 INFO_REALIGN_3_PRIME chrX 21578549
chrX:21578549 GTT
GTT
 G
G
 3 a0001c0001t0006g0161
a0001c0001t0009g0010
a0001c0001t0041g0009
a0001c0001t0006g0161
a0001c0001t0009g0010
a0001c0001t0041g0009
 3 HG02280.hp2
HG02976.hp1
HG03098.hp1
HG02280.hp2
HG02976.hp1
HG03098.hp1
 intron_variant MODIFIER c.1609-12008_1609-12
others(8): Show 
c.1609-12008_1609-12007delTT
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 13/21 INFO_REALIGN_3_PRIME chrX 21578549
chrX:21578930 G
G
 A
A
 2 a0001c0001t0003g0116
a0001c0001t0004g0117
a0001c0001t0003g0116
a0001c0001t0004g0117
 2 HG02015.hp1
HG03017.hp1
HG02015.hp1
HG03017.hp1
 intron_variant MODIFIER c.1609-11642G>A
c.1609-11642G>A
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 13/21 chrX 21578930
chrX:21579718 G
G
 C
C
 8 a0001c0001t0002g0028
a0001c0001t0003g0024
a0001c0001t0003g0029
others(5): Show 
a0001c0001t0002g0028
a0001c0001t0003g0024
a0001c0001t0003g0029
a0001c0001t0003g0151
a0001c0001t0017g0146
a0001c0001t0038g0150
a0001c0001t0040g0027
a0002c0005t0003g0030
 8 HG01081.hp2
HG01109.hp1
HG02258.hp1
others(5): Show 
HG01081.hp2
HG01109.hp1
HG02258.hp1
HG02280.hp1
HG02886.hp2
HG02895.hp1
NA19043.hp1
NA19240.hp1
 intron_variant MODIFIER c.1609-10854G>C
c.1609-10854G>C
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 13/21 chrX 21579718
chrX:21581004 C
C
 T
T
 2 a0001c0001t0022g0033
a0001c0001t0027g0034
a0001c0001t0022g0033
a0001c0001t0027g0034
 2 HG02055.hp1
HG02486.hp1
HG02055.hp1
HG02486.hp1
 intron_variant MODIFIER c.1609-9568C>T
c.1609-9568C>T
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 13/21 chrX 21581004
chrX:21581245 T
T
 C
C
 1 a0001c0001t0042g0008
a0001c0001t0042g0008
 1 HG02647.hp1
HG02647.hp1
 intron_variant MODIFIER c.1609-9327T>C
c.1609-9327T>C
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 13/21 chrX 21581245
chrX:21581521 G
G
 A
A
 1 a0001c0002t0001g0042
a0001c0002t0001g0042
 1 HG01934.hp1
HG01934.hp1
 intron_variant MODIFIER c.1609-9051G>A
c.1609-9051G>A
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 13/21 chrX 21581521
chrX:21581657 A
A
 G
G
 4 a0001c0001t0042g0008
a0001c0003t0014g0147
a0001c0003t0014g0149
others(1): Show 
a0001c0001t0042g0008
a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
 4 HG02615.hp1
HG02647.hp1
HG02965.hp1
others(1): Show 
HG02615.hp1
HG02647.hp1
HG02965.hp1
HG03471.hp1
 intron_variant MODIFIER c.1609-8915A>G
c.1609-8915A>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 13/21 chrX 21581657
chrX:21581770 T
T
 C
C
 5 a0001c0001t0003g0015
a0001c0001t0011g0016
a0001c0001t0011g0017
others(2): Show 
a0001c0001t0003g0015
a0001c0001t0011g0016
a0001c0001t0011g0017
a0001c0001t0011g0138
a0001c0001t0012g0025
 5 HG02717.hp1
HG03041.hp1
HG03486.hp2
others(2): Show 
HG02717.hp1
HG03041.hp1
HG03486.hp2
HG03579.hp1
NA18522.hp1
 intron_variant MODIFIER c.1609-8802T>C
c.1609-8802T>C
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 13/21 chrX 21581770
chrX:21582396 T
T
 C
C
 1 a0001c0001t0042g0008
a0001c0001t0042g0008
 1 HG02647.hp1
HG02647.hp1
 intron_variant MODIFIER c.1609-8176T>C
c.1609-8176T>C
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 13/21 chrX 21582396
chrX:21582958 T
T
 A
A
 1 a0001c0001t0001g0097
a0001c0001t0001g0097
 1 HG04228.hp1
HG04228.hp1
 intron_variant MODIFIER c.1609-7614T>A
c.1609-7614T>A
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 13/21 chrX 21582958
chrX:21583313 T
T
 C
C
 6 a0001c0001t0009g0010
a0001c0001t0009g0011
a0001c0001t0009g0012
others(3): Show 
a0001c0001t0009g0010
a0001c0001t0009g0011
a0001c0001t0009g0012
a0001c0001t0009g0013
a0001c0001t0019g0014
a0001c0001t0041g0009
 6 HG01884.hp2
HG02280.hp2
HG02572.hp1
others(3): Show 
HG01884.hp2
HG02280.hp2
HG02572.hp1
HG02809.hp1
HG03098.hp1
HG03486.hp1
 intron_variant MODIFIER c.1609-7259T>C
c.1609-7259T>C
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 13/21 chrX 21583313
chrX:21584360 T
T
 C
C
 1 a0001c0001t0007g0022
a0001c0001t0007g0022
 1 HG02132.hp1
HG02132.hp1
 intron_variant MODIFIER c.1609-6212T>C
c.1609-6212T>C
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 13/21 chrX 21584360
chrX:21584933 C
C
 G
G
 1 a0001c0001t0001g0093
a0001c0001t0001g0093
 1 NA20805.hp1
NA20805.hp1
 intron_variant MODIFIER c.1609-5639C>G
c.1609-5639C>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 13/21 chrX 21584933
chrX:21585621 G
G
 A
A
 1 a0001c0001t0005g0095
a0001c0001t0005g0095
 1 NA18960.hp1
NA18960.hp1
 intron_variant MODIFIER c.1609-4951G>A
c.1609-4951G>A
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 13/21 chrX 21585621
chrX:21585667 T
T
 G
G
 1 a0001c0001t0042g0008
a0001c0001t0042g0008
 1 HG02647.hp1
HG02647.hp1
 intron_variant MODIFIER c.1609-4905T>G
c.1609-4905T>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 13/21 chrX 21585667
chrX:21585707 T
T
 C
C
 2 a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0014g0147
a0001c0003t0014g0149
 2 HG02615.hp1
HG03471.hp1
HG02615.hp1
HG03471.hp1
 intron_variant MODIFIER c.1609-4865T>C
c.1609-4865T>C
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 13/21 chrX 21585707
chrX:21586185 G
G
 C
C
 1 a0001c0001t0030g0086
a0001c0001t0030g0086
 1 HG04199.hp1
HG04199.hp1
 intron_variant MODIFIER c.1609-4387G>C
c.1609-4387G>C
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 13/21 chrX 21586185
chrX:21586251 G
G
 A
A
 1 a0001c0001t0002g0019
a0001c0001t0002g0019
 1 HG01106.hp1
HG01106.hp1
 intron_variant MODIFIER c.1609-4321G>A
c.1609-4321G>A
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 13/21 chrX 21586251
chrX:21586332 G
G
 T
T
 2 a0001c0001t0002g0112
a0001c0001t0013g0066
a0001c0001t0002g0112
a0001c0001t0013g0066
 2 HG01167.hp1
HG01433.hp1
HG01167.hp1
HG01433.hp1
 intron_variant MODIFIER c.1609-4240G>T
c.1609-4240G>T
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 13/21 chrX 21586332
chrX:21586413 G
G
 C
C
 1 a0001c0001t0002g0019
a0001c0001t0002g0019
 1 HG01106.hp1
HG01106.hp1
 intron_variant MODIFIER c.1609-4159G>C
c.1609-4159G>C
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 13/21 chrX 21586413
chrX:21586472 G
G
 T
T
 1 a0001c0001t0013g0066
a0001c0001t0013g0066
 1 HG01167.hp1
HG01167.hp1
 intron_variant MODIFIER c.1609-4100G>T
c.1609-4100G>T
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 13/21 chrX 21586472
chrX:21586847 C
C
 A
A
 1 a0001c0001t0042g0008
a0001c0001t0042g0008
 1 HG02647.hp1
HG02647.hp1
 intron_variant MODIFIER c.1609-3725C>A
c.1609-3725C>A
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 13/21 chrX 21586847
chrX:21586877 G
G
 C
C
 2 a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0014g0147
a0001c0003t0014g0149
 2 HG02615.hp1
HG03471.hp1
HG02615.hp1
HG03471.hp1
 intron_variant MODIFIER c.1609-3695G>C
c.1609-3695G>C
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 13/21 chrX 21586877
chrX:21586904 G
G
 A
A
 4 a0001c0001t0002g0115
a0001c0001t0003g0070
a0001c0001t0003g0101
others(1): Show 
a0001c0001t0002g0115
a0001c0001t0003g0070
a0001c0001t0003g0101
a0001c0001t0035g0054
 4 NA18967.hp1
NA18974.hp1
NA18994.hp1
others(1): Show 
NA18967.hp1
NA18974.hp1
NA18994.hp1
NA18995.hp1
 intron_variant MODIFIER c.1609-3668G>A
c.1609-3668G>A
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 13/21 chrX 21586904
chrX:21587111 C
C
 T
T
 1 a0001c0001t0001g0053
a0001c0001t0001g0053
 1 HG00280.hp1
HG00280.hp1
 intron_variant MODIFIER c.1609-3461C>T
c.1609-3461C>T
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 13/21 chrX 21587111
chrX:21587156 T
T
 G
G
 4 a0001c0001t0001g0068
a0001c0001t0001g0069
a0001c0001t0031g0065
others(1): Show 
a0001c0001t0001g0068
a0001c0001t0001g0069
a0001c0001t0031g0065
a0001c0001t0033g0002
 4 HG02040.hp1
NA18989.hp1
NA19006.hp1
others(1): Show 
HG02040.hp1
NA18989.hp1
NA19006.hp1
NA19085.hp1
 intron_variant MODIFIER c.1609-3416T>G
c.1609-3416T>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 13/21 chrX 21587156
chrX:21587493 T
T
 C
C
 1 a0001c0001t0019g0014
a0001c0001t0019g0014
 1 HG01884.hp2
HG01884.hp2
 intron_variant MODIFIER c.1609-3079T>C
c.1609-3079T>C
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 13/21 chrX 21587493
chrX:21587597 T
T
 G
G
 5 a0001c0001t0010g0152
a0001c0001t0010g0153
a0001c0001t0010g0162
others(2): Show 
a0001c0001t0010g0152
a0001c0001t0010g0153
a0001c0001t0010g0162
a0001c0001t0017g0018
a0001c0001t0019g0014
 5 HG01071.hp2
HG01884.hp2
HG03209.hp1
others(2): Show 
HG01071.hp2
HG01884.hp2
HG03209.hp1
HG03225.hp1
NA19240.hp2
 intron_variant MODIFIER c.1609-2975T>G
c.1609-2975T>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 13/21 chrX 21587597
chrX:21587887 G
G
 GA
GA
 1 a0001c0001t0002g0047
a0001c0001t0002g0047
 1 NA19076.hp1
NA19076.hp1
 intron_variant MODIFIER c.1609-2683dupA
c.1609-2683dupA
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 13/21 INFO_REALIGN_3_PRIME chrX 21587887
chrX:21587943 G
G
 A
A
 3 a0001c0001t0002g0115
a0001c0001t0003g0070
a0001c0001t0035g0054
a0001c0001t0002g0115
a0001c0001t0003g0070
a0001c0001t0035g0054
 3 NA18967.hp1
NA18974.hp1
NA18994.hp1
NA18967.hp1
NA18974.hp1
NA18994.hp1
 intron_variant MODIFIER c.1609-2629G>A
c.1609-2629G>A
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 13/21 chrX 21587943
chrX:21588773 GT
GT
 G
G
 1 a0001c0001t0012g0045
a0001c0001t0012g0045
 1 HG02145.hp1
HG02145.hp1
 intron_variant MODIFIER c.1609-1797delT
c.1609-1797delT
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 13/21 INFO_REALIGN_3_PRIME chrX 21588773
chrX:21588844 A
A
 G
G
 6 a0001c0001t0003g0029
a0001c0001t0007g0140
a0001c0001t0010g0152
others(3): Show 
a0001c0001t0003g0029
a0001c0001t0007g0140
a0001c0001t0010g0152
a0001c0001t0010g0153
a0001c0001t0010g0162
a0001c0001t0017g0018
 6 HG01071.hp2
HG02895.hp1
HG02922.hp1
others(3): Show 
HG01071.hp2
HG02895.hp1
HG02922.hp1
HG03209.hp1
HG03225.hp1
NA19240.hp2
 intron_variant MODIFIER c.1609-1728A>G
c.1609-1728A>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 13/21 chrX 21588844
chrX:21589168 A
A
 G
G
 6 a0001c0001t0009g0010
a0001c0001t0009g0011
a0001c0001t0009g0012
others(3): Show 
a0001c0001t0009g0010
a0001c0001t0009g0011
a0001c0001t0009g0012
a0001c0001t0009g0013
a0001c0001t0019g0014
a0001c0001t0041g0009
 6 HG01884.hp2
HG02280.hp2
HG02572.hp1
others(3): Show 
HG01884.hp2
HG02280.hp2
HG02572.hp1
HG02809.hp1
HG03098.hp1
HG03486.hp1
 intron_variant MODIFIER c.1609-1404A>G
c.1609-1404A>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 13/21 chrX 21589168
chrX:21589685 A
A
 G
G
 1 a0001c0001t0024g0156
a0001c0001t0024g0156
 1 NA20300.hp2
NA20300.hp2
 intron_variant MODIFIER c.1609-887A>G
c.1609-887A>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 13/21 chrX 21589685
chrX:21589777 C
C
 T
T
 1 a0001c0001t0001g0109
a0001c0001t0001g0109
 1 HG02738.hp1
HG02738.hp1
 intron_variant MODIFIER c.1609-795C>T
c.1609-795C>T
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 13/21 chrX 21589777
chrX:21590503 G
G
 A
A
 2 a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0014g0147
a0001c0003t0014g0149
 2 HG02615.hp1
HG03471.hp1
HG02615.hp1
HG03471.hp1
 intron_variant MODIFIER c.1609-69G>A
c.1609-69G>A
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 13/21 chrX 21590503
chrX:21591383 T
T
 TTG
TTG
 5 a0001c0001t0007g0140
a0001c0001t0010g0152
a0001c0001t0010g0153
others(2): Show 
a0001c0001t0007g0140
a0001c0001t0010g0152
a0001c0001t0010g0153
a0001c0001t0010g0162
a0001c0001t0017g0018
 5 HG01071.hp2
HG02922.hp1
HG03209.hp1
others(2): Show 
HG01071.hp2
HG02922.hp1
HG03209.hp1
HG03225.hp1
NA19240.hp2
 intron_variant MODIFIER c.1830+189_1830+190i
others(4): Show 
c.1830+189_1830+190insTG
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 15/21 chrX 21591383
chrX:21591384 A
A
 T
T
 5 a0001c0001t0007g0140
a0001c0001t0010g0152
a0001c0001t0010g0153
others(2): Show 
a0001c0001t0007g0140
a0001c0001t0010g0152
a0001c0001t0010g0153
a0001c0001t0010g0162
a0001c0001t0017g0018
 5 HG01071.hp2
HG02922.hp1
HG03209.hp1
others(2): Show 
HG01071.hp2
HG02922.hp1
HG03209.hp1
HG03225.hp1
NA19240.hp2
 intron_variant MODIFIER c.1830+190A>T
c.1830+190A>T
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 15/21 chrX 21591384
chrX:21591558 G
G
 GT
GT
 1 a0001c0001t0001g0035
a0001c0001t0001g0035
 1 HG02056.hp1
HG02056.hp1
 intron_variant MODIFIER c.1830+374dupT
c.1830+374dupT
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 15/21 INFO_REALIGN_3_PRIME chrX 21591558
chrX:21591558 G
G
 T
T
 1 a0001c0001t0003g0029
a0001c0001t0003g0029
 1 HG02895.hp1
HG02895.hp1
 intron_variant MODIFIER c.1830+364G>T
c.1830+364G>T
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 15/21 chrX 21591558
chrX:21591704 C
C
 T
T
 3 a0001c0001t0002g0004
a0001c0001t0003g0031
a0001c0001t0008g0005
a0001c0001t0002g0004
a0001c0001t0003g0031
a0001c0001t0008g0005
 3 HG01069.hp1
HG01071.hp1
HG02976.hp2
HG01069.hp1
HG01071.hp1
HG02976.hp2
 intron_variant MODIFIER c.1830+510C>T
c.1830+510C>T
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 15/21 chrX 21591704
chrX:21591710 G
G
 T
T
 3 a0001c0001t0002g0004
a0001c0001t0003g0031
a0001c0001t0008g0005
a0001c0001t0002g0004
a0001c0001t0003g0031
a0001c0001t0008g0005
 3 HG01069.hp1
HG01071.hp1
HG02976.hp2
HG01069.hp1
HG01071.hp1
HG02976.hp2
 intron_variant MODIFIER c.1830+516G>T
c.1830+516G>T
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 15/21 chrX 21591710
chrX:21591728 A
A
 G
G
 6 a0001c0001t0009g0010
a0001c0001t0009g0011
a0001c0001t0009g0012
others(3): Show 
a0001c0001t0009g0010
a0001c0001t0009g0011
a0001c0001t0009g0012
a0001c0001t0009g0013
a0001c0001t0019g0014
a0001c0001t0041g0009
 6 HG01884.hp2
HG02280.hp2
HG02572.hp1
others(3): Show 
HG01884.hp2
HG02280.hp2
HG02572.hp1
HG02809.hp1
HG03098.hp1
HG03486.hp1
 intron_variant MODIFIER c.1830+534A>G
c.1830+534A>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 15/21 chrX 21591728
chrX:21592027 A
A
 G
G
 29 a0001c0001t0003g0029
a0001c0001t0006g0155
a0001c0001t0006g0157
others(26): Show 
a0001c0001t0003g0029
a0001c0001t0006g0155
a0001c0001t0006g0157
a0001c0001t0006g0159
a0001c0001t0006g0160
a0001c0001t0006g0161
a0001c0001t0007g0140
a0001c0001t0009g0010
a0001c0001t0009g0011
a0001c0001t0009g0012
a0001c0001t0009g0013
a0001c0001t0010g0152
a0001c0001t0010g0153
a0001c0001t0010g0162
a0001c0001t0011g0016
a0001c0001t0011g0017
a0001c0001t0011g0138
a0001c0001t0012g0025
a0001c0001t0017g0018
a0001c0001t0019g0014
a0001c0001t0020g0141
a0001c0001t0023g0006
a0001c0001t0041g0009
a0001c0001t0042g0008
a0001c0001t0043g0007
a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0006t0028g0059
a0003c0004t0006g0154
 29 HG01071.hp2
HG01243.hp1
HG01884.hp1
others(26): Show 
HG01071.hp2
HG01243.hp1
HG01884.hp1
HG01884.hp2
HG02280.hp2
HG02572.hp1
HG02615.hp1
HG02615.hp2
HG02647.hp1
HG02809.hp1
HG02886.hp1
HG02895.hp1
HG02922.hp1
HG02922.hp2
HG02976.hp1
HG03041.hp1
HG03098.hp1
HG03130.hp1
HG03209.hp1
HG03225.hp1
HG03471.hp1
HG03486.hp1
HG03486.hp2
HG03491.hp2
HG03516.hp2
HG03579.hp1
HG03654.hp1
NA18522.hp1
NA19240.hp2
 intron_variant MODIFIER c.1830+833A>G
c.1830+833A>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 15/21 chrX 21592027
chrX:21592775 A
A
 T
T
 2 a0001c0001t0002g0112
a0001c0001t0013g0066
a0001c0001t0002g0112
a0001c0001t0013g0066
 2 HG01167.hp1
HG01433.hp1
HG01167.hp1
HG01433.hp1
 intron_variant MODIFIER c.1830+1581A>T
c.1830+1581A>T
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 15/21 chrX 21592775
chrX:21593184 A
A
 C
C
 1 a0001c0001t0001g0074
a0001c0001t0001g0074
 1 NA18983.hp1
NA18983.hp1
 intron_variant MODIFIER c.1831-1790A>C
c.1831-1790A>C
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 15/21 chrX 21593184
chrX:21593650 G
G
 A
A
 162 a0001c0001t0001g0001
a0001c0001t0001g0035
a0001c0001t0001g0036
others(159): Show 
a0001c0001t0001g0001
a0001c0001t0001g0035
a0001c0001t0001g0036
a0001c0001t0001g0037
a0001c0001t0001g0039
a0001c0001t0001g0048
a0001c0001t0001g0051
a0001c0001t0001g0052
a0001c0001t0001g0053
a0001c0001t0001g0058
a0001c0001t0001g0060
a0001c0001t0001g0062
a0001c0001t0001g0067
a0001c0001t0001g0068
a0001c0001t0001g0069
a0001c0001t0001g0071
a0001c0001t0001g0073
a0001c0001t0001g0074
a0001c0001t0001g0075
a0001c0001t0001g0076
a0001c0001t0001g0077
a0001c0001t0001g0078
a0001c0001t0001g0080
a0001c0001t0001g0081
a0001c0001t0001g0082
a0001c0001t0001g0083
a0001c0001t0001g0084
a0001c0001t0001g0087
a0001c0001t0001g0089
a0001c0001t0001g0090
a0001c0001t0001g0093
a0001c0001t0001g0094
a0001c0001t0001g0096
a0001c0001t0001g0097
a0001c0001t0001g0102
a0001c0001t0001g0103
a0001c0001t0001g0109
a0001c0001t0001g0128
a0001c0001t0001g0131
a0001c0001t0001g0134
a0001c0001t0001g0137
a0001c0001t0001g0145
a0001c0001t0001g0158
a0001c0001t0002g0003
a0001c0001t0002g0004
a0001c0001t0002g0019
a0001c0001t0002g0028
a0001c0001t0002g0043
a0001c0001t0002g0046
a0001c0001t0002g0047
a0001c0001t0002g0049
a0001c0001t0002g0050
a0001c0001t0002g0110
a0001c0001t0002g0111
a0001c0001t0002g0112
a0001c0001t0002g0113
a0001c0001t0002g0114
a0001c0001t0002g0115
a0001c0001t0002g0118
a0001c0001t0002g0119
a0001c0001t0002g0120
a0001c0001t0002g0121
a0001c0001t0002g0122
a0001c0001t0002g0125
a0001c0001t0002g0126
a0001c0001t0003g0015
a0001c0001t0003g0024
a0001c0001t0003g0029
a0001c0001t0003g0031
a0001c0001t0003g0044
a0001c0001t0003g0061
a0001c0001t0003g0070
a0001c0001t0003g0101
a0001c0001t0003g0116
a0001c0001t0003g0133
a0001c0001t0003g0136
a0001c0001t0003g0151
a0001c0001t0004g0020
a0001c0001t0004g0021
a0001c0001t0004g0055
a0001c0001t0004g0056
a0001c0001t0004g0057
a0001c0001t0004g0064
a0001c0001t0004g0117
a0001c0001t0004g0129
a0001c0001t0004g0132
a0001c0001t0005g0063
a0001c0001t0005g0072
a0001c0001t0005g0079
a0001c0001t0005g0095
a0001c0001t0005g0099
a0001c0001t0006g0155
a0001c0001t0006g0157
a0001c0001t0006g0159
a0001c0001t0006g0160
a0001c0001t0006g0161
a0001c0001t0007g0022
a0001c0001t0007g0127
a0001c0001t0007g0140
a0001c0001t0008g0005
a0001c0001t0008g0124
a0001c0001t0008g0135
a0001c0001t0008g0143
a0001c0001t0009g0010
a0001c0001t0009g0011
a0001c0001t0009g0012
a0001c0001t0009g0013
a0001c0001t0010g0152
a0001c0001t0010g0153
a0001c0001t0010g0162
a0001c0001t0011g0016
a0001c0001t0011g0017
a0001c0001t0011g0138
a0001c0001t0012g0025
a0001c0001t0012g0045
a0001c0001t0012g0142
a0001c0001t0013g0066
a0001c0001t0013g0100
a0001c0001t0015g0038
a0001c0001t0015g0098
a0001c0001t0016g0032
a0001c0001t0016g0085
a0001c0001t0017g0018
a0001c0001t0017g0146
a0001c0001t0018g0123
a0001c0001t0019g0014
a0001c0001t0020g0141
a0001c0001t0021g0088
a0001c0001t0022g0033
a0001c0001t0023g0006
a0001c0001t0024g0156
a0001c0001t0025g0130
a0001c0001t0027g0034
a0001c0001t0029g0023
a0001c0001t0030g0086
a0001c0001t0031g0065
a0001c0001t0032g0163
a0001c0001t0033g0002
a0001c0001t0034g0091
a0001c0001t0035g0054
a0001c0001t0037g0092
a0001c0001t0038g0150
a0001c0001t0039g0144
a0001c0001t0040g0027
a0001c0001t0041g0009
a0001c0001t0042g0008
a0001c0001t0043g0007
a0001c0002t0001g0042
a0001c0002t0001g0104
a0001c0002t0001g0105
a0001c0002t0001g0107
a0001c0002t0001g0108
a0001c0002t0005g0106
a0001c0002t0007g0040
a0001c0002t0007g0041
a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
a0001c0006t0028g0059
a0001c0007t0036g0026
a0002c0005t0003g0030
a0003c0004t0006g0154
 162 HG00140.hp1
HG00280.hp1
HG00609.hp1
others(159): Show 
HG00140.hp1
HG00280.hp1
HG00609.hp1
HG00621.hp1
HG00642.hp1
HG00673.hp1
HG00735.hp1
HG00735.hp2
HG00738.hp1
HG00741.hp1
HG00741.hp2
HG01069.hp1
HG01071.hp1
HG01071.hp2
HG01074.hp1
HG01081.hp1
HG01081.hp2
HG01099.hp1
HG01106.hp1
HG01109.hp1
HG01167.hp1
HG01192.hp1
HG01243.hp1
HG01255.hp1
HG01256.hp1
HG01258.hp1
HG01261.hp1
HG01358.hp1
HG01433.hp1
HG01515.hp1
HG01884.hp1
HG01884.hp2
HG01928.hp1
HG01934.hp1
HG01943.hp1
HG01952.hp1
HG02015.hp1
HG02027.hp1
HG02040.hp1
HG02055.hp1
HG02056.hp1
HG02071.hp1
HG02074.hp1
HG02083.hp1
HG02129.hp1
HG02132.hp1
HG02135.hp1
HG02145.hp1
HG02258.hp1
HG02280.hp1
HG02280.hp2
HG02300.hp1
HG02486.hp1
HG02572.hp1
HG02602.hp1
HG02615.hp1
HG02615.hp2
HG02647.hp1
HG02698.hp1
HG02717.hp1
HG02735.hp1
HG02738.hp1
HG02809.hp1
HG02809.hp2
HG02886.hp1
HG02886.hp2
HG02895.hp1
HG02922.hp1
HG02922.hp2
HG02965.hp1
HG02976.hp1
HG02976.hp2
HG03017.hp1
HG03041.hp1
HG03041.hp2
HG03098.hp1
HG03130.hp1
HG03139.hp1
HG03209.hp1
HG03225.hp1
HG03471.hp1
HG03486.hp1
HG03486.hp2
HG03490.hp1
HG03491.hp1
HG03491.hp2
HG03492.hp1
HG03516.hp1
HG03516.hp2
HG03579.hp1
HG03654.hp1
HG03688.hp1
HG03710.hp1
HG03942.hp1
HG04115.hp1
HG04199.hp1
HG04204.hp1
HG04228.hp1
NA18522.hp1
NA18612.hp1
NA18747.hp1
NA18943.hp1
NA18944.hp1
NA18945.hp1
NA18948.hp1
NA18952.hp1
NA18953.hp1
NA18955.hp1
NA18959.hp1
NA18960.hp1
NA18961.hp1
NA18962.hp1
NA18965.hp1
NA18966.hp1
NA18967.hp1
NA18970.hp1
NA18971.hp1
NA18974.hp1
NA18977.hp1
NA18982.hp1
NA18983.hp1
NA18984.hp1
NA18986.hp1
NA18988.hp1
NA18989.hp1
NA18990.hp1
NA18994.hp1
NA18995.hp1
NA19000.hp1
NA19004.hp1
NA19005.hp1
NA19006.hp1
NA19007.hp1
NA19009.hp1
NA19012.hp1
NA19043.hp1
NA19055.hp1
NA19056.hp1
NA19058.hp1
NA19060.hp1
NA19062.hp1
NA19063.hp1
NA19066.hp1
NA19068.hp1
NA19070.hp1
NA19072.hp1
NA19076.hp1
NA19079.hp1
NA19082.hp1
NA19085.hp1
NA19086.hp1
NA19088.hp1
NA19089.hp1
NA19091.hp1
NA19240.hp1
NA19240.hp2
NA20300.hp1
NA20300.hp2
NA20752.hp1
NA20805.hp1
NA20905.hp1
homoSapiens_chm13v2.hp1
 intron_variant MODIFIER c.1831-1324G>A
c.1831-1324G>A
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 15/21 chrX 21593650
chrX:21593772 G
G
 A
A
 7 a0001c0001t0007g0140
a0001c0001t0010g0152
a0001c0001t0010g0153
others(4): Show 
a0001c0001t0007g0140
a0001c0001t0010g0152
a0001c0001t0010g0153
a0001c0001t0010g0162
a0001c0001t0020g0141
a0001c0003t0014g0147
a0001c0003t0014g0149
 7 HG01243.hp1
HG02615.hp1
HG02922.hp1
others(4): Show 
HG01243.hp1
HG02615.hp1
HG02922.hp1
HG03209.hp1
HG03225.hp1
HG03471.hp1
NA19240.hp2
 intron_variant MODIFIER c.1831-1202G>A
c.1831-1202G>A
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 15/21 chrX 21593772
chrX:21593914 C
C
 T
T
 1 a0001c0001t0020g0141
a0001c0001t0020g0141
 1 HG01243.hp1
HG01243.hp1
 intron_variant MODIFIER c.1831-1060C>T
c.1831-1060C>T
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 15/21 chrX 21593914
chrX:21594025 A
A
 T
T
 4 a0001c0001t0007g0140
a0001c0001t0010g0152
a0001c0001t0010g0153
others(1): Show 
a0001c0001t0007g0140
a0001c0001t0010g0152
a0001c0001t0010g0153
a0001c0001t0010g0162
 4 HG02922.hp1
HG03209.hp1
HG03225.hp1
others(1): Show 
HG02922.hp1
HG03209.hp1
HG03225.hp1
NA19240.hp2
 intron_variant MODIFIER c.1831-949A>T
c.1831-949A>T
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 15/21 chrX 21594025
chrX:21594117 T
T
 C
C
 1 a0001c0007t0036g0026
a0001c0007t0036g0026
 1 HG01081.hp1
HG01081.hp1
 intron_variant MODIFIER c.1831-857T>C
c.1831-857T>C
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 15/21 chrX 21594117
chrX:21595082 G
G
 GT
GT
 1 a0001c0001t0002g0019
a0001c0001t0002g0019
 1 HG01106.hp1
HG01106.hp1
 intron_variant MODIFIER c.1904+46dupT
c.1904+46dupT
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 16/21 INFO_REALIGN_3_PRIME chrX 21595082
chrX:21595478 C
C
 T
T
 1 a0001c0001t0002g0114
a0001c0001t0002g0114
 1 HG00140.hp1
HG00140.hp1
 intron_variant MODIFIER c.1976+83C>T
c.1976+83C>T
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 17/21 chrX 21595478
chrX:21595555 A
A
 G
G
 2 a0001c0001t0033g0002
a0001c0002t0007g0041
a0001c0001t0033g0002
a0001c0002t0007g0041
 2 NA18977.hp1
NA19006.hp1
NA18977.hp1
NA19006.hp1
 intron_variant MODIFIER c.1976+160A>G
c.1976+160A>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 17/21 chrX 21595555
chrX:21595746 C
C
 T
T
 1 a0001c0001t0024g0156
a0001c0001t0024g0156
 1 NA20300.hp2
NA20300.hp2
 intron_variant MODIFIER c.1976+351C>T
c.1976+351C>T
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 17/21 chrX 21595746
chrX:21595902 C
C
 CA
CA
 2 a0001c0001t0009g0011
a0001c0001t0009g0012
a0001c0001t0009g0011
a0001c0001t0009g0012
 2 HG02572.hp1
HG02809.hp1
HG02572.hp1
HG02809.hp1
 intron_variant MODIFIER c.1976+508dupA
c.1976+508dupA
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 17/21 INFO_REALIGN_3_PRIME chrX 21595902
chrX:21596120 T
T
 C
C
 1 a0001c0001t0027g0034
a0001c0001t0027g0034
 1 HG02486.hp1
HG02486.hp1
 intron_variant MODIFIER c.1976+725T>C
c.1976+725T>C
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 17/21 chrX 21596120
chrX:21596264 G
G
 A
A
 3 a0001c0001t0006g0157
a0001c0001t0006g0159
a0001c0006t0028g0059
a0001c0001t0006g0157
a0001c0001t0006g0159
a0001c0006t0028g0059
 3 HG02886.hp1
HG03130.hp1
HG03516.hp2
HG02886.hp1
HG03130.hp1
HG03516.hp2
 intron_variant MODIFIER c.1976+869G>A
c.1976+869G>A
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 17/21 chrX 21596264
chrX:21596503 T
T
 C
C
 1 a0001c0001t0001g0097
a0001c0001t0001g0097
 1 HG04228.hp1
HG04228.hp1
 intron_variant MODIFIER c.1976+1108T>C
c.1976+1108T>C
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 17/21 chrX 21596503
chrX:21596561 C
C
 CA
CA
 1 a0001c0001t0002g0047
a0001c0001t0002g0047
 1 NA19076.hp1
NA19076.hp1
 intron_variant MODIFIER c.1976+1170dupA
c.1976+1170dupA
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 17/21 INFO_REALIGN_3_PRIME chrX 21596561
chrX:21596662 GT
GT
 G
G
 1 a0001c0001t0003g0061
a0001c0001t0003g0061
 1 NA18970.hp1
NA18970.hp1
 intron_variant MODIFIER c.1976+1279delT
c.1976+1279delT
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 17/21 INFO_REALIGN_3_PRIME chrX 21596662
chrX:21597015 G
G
 A
A
 4 a0001c0001t0007g0140
a0001c0001t0010g0152
a0001c0001t0010g0153
others(1): Show 
a0001c0001t0007g0140
a0001c0001t0010g0152
a0001c0001t0010g0153
a0001c0001t0010g0162
 4 HG02922.hp1
HG03209.hp1
HG03225.hp1
others(1): Show 
HG02922.hp1
HG03209.hp1
HG03225.hp1
NA19240.hp2
 intron_variant MODIFIER c.1976+1620G>A
c.1976+1620G>A
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 17/21 chrX 21597015
chrX:21597033 C
C
 A
A
 1 a0001c0007t0036g0026
a0001c0007t0036g0026
 1 HG01081.hp1
HG01081.hp1
 intron_variant MODIFIER c.1976+1638C>A
c.1976+1638C>A
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 17/21 chrX 21597033
chrX:21597404 T
T
 G
G
 4 a0001c0001t0007g0140
a0001c0001t0010g0152
a0001c0001t0010g0153
others(1): Show 
a0001c0001t0007g0140
a0001c0001t0010g0152
a0001c0001t0010g0153
a0001c0001t0010g0162
 4 HG02922.hp1
HG03209.hp1
HG03225.hp1
others(1): Show 
HG02922.hp1
HG03209.hp1
HG03225.hp1
NA19240.hp2
 intron_variant MODIFIER c.1976+2009T>G
c.1976+2009T>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 17/21 chrX 21597404
chrX:21598008 C
C
 CAT
CAT
 3 a0001c0001t0001g0036
a0001c0001t0020g0141
a0001c0001t0042g0008
a0001c0001t0001g0036
a0001c0001t0020g0141
a0001c0001t0042g0008
 3 HG01243.hp1
HG02647.hp1
HG04115.hp1
HG01243.hp1
HG02647.hp1
HG04115.hp1
 intron_variant MODIFIER c.1976+2631_1976+263
others(6): Show 
c.1976+2631_1976+2632dupTA
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 17/21 INFO_REALIGN_3_PRIME chrX 21598008
chrX:21598008 C
C
 CATAT
CATAT
 3 a0001c0001t0001g0074
a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0001t0001g0074
a0001c0003t0014g0147
a0001c0003t0014g0149
 3 HG02615.hp1
HG03471.hp1
NA18983.hp1
HG02615.hp1
HG03471.hp1
NA18983.hp1
 intron_variant MODIFIER c.1976+2629_1976+263
others(8): Show 
c.1976+2629_1976+2632dupTATA
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 17/21 INFO_REALIGN_3_PRIME chrX 21598008
chrX:21598008 CAT
CAT
 C
C
 7 a0001c0001t0001g0048
a0001c0001t0001g0052
a0001c0001t0009g0010
others(4): Show 
a0001c0001t0001g0048
a0001c0001t0001g0052
a0001c0001t0009g0010
a0001c0001t0017g0146
a0001c0001t0024g0156
a0001c0001t0032g0163
a0001c0001t0041g0009
 7 HG00673.hp1
HG01109.hp1
HG02280.hp2
others(4): Show 
HG00673.hp1
HG01109.hp1
HG02280.hp2
HG03098.hp1
NA19007.hp1
NA19063.hp1
NA20300.hp2
 intron_variant MODIFIER c.1976+2631_1976+263
others(6): Show 
c.1976+2631_1976+2632delTA
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 17/21 INFO_REALIGN_3_PRIME chrX 21598008
chrX:21598008 CATAT
CATAT
 C
C
 1 a0001c0001t0012g0142
a0001c0001t0012g0142
 1 HG03139.hp1
HG03139.hp1
 intron_variant MODIFIER c.1976+2629_1976+263
others(8): Show 
c.1976+2629_1976+2632delTATA
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 17/21 INFO_REALIGN_3_PRIME chrX 21598008
chrX:21598024 TATAC
TATAC
 T
T
 1 a0001c0007t0036g0026
a0001c0007t0036g0026
 1 HG01081.hp1
HG01081.hp1
 intron_variant MODIFIER c.1976+2631_1976+263
others(8): Show 
c.1976+2631_1976+2634delTACA
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 17/21 INFO_REALIGN_3_PRIME chrX 21598024
chrX:21598025 A
A
 G
G
 2 a0001c0001t0022g0033
a0001c0001t0027g0034
a0001c0001t0022g0033
a0001c0001t0027g0034
 2 HG02055.hp1
HG02486.hp1
HG02055.hp1
HG02486.hp1
 intron_variant MODIFIER c.1976+2630A>G
c.1976+2630A>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 17/21 chrX 21598025
chrX:21598026 T
T
 TAC
TAC
 1 a0001c0001t0006g0160
a0001c0001t0006g0160
 1 HG02615.hp2
HG02615.hp2
 intron_variant MODIFIER c.1976+2647_1976+264
others(6): Show 
c.1976+2647_1976+2648dupCA
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 17/21 INFO_REALIGN_3_PRIME chrX 21598026
chrX:21598042 C
C
 A
A
 2 a0001c0001t0011g0016
a0001c0001t0011g0138
a0001c0001t0011g0016
a0001c0001t0011g0138
 2 HG03041.hp1
NA18522.hp1
HG03041.hp1
NA18522.hp1
 intron_variant MODIFIER c.1976+2647C>A
c.1976+2647C>A
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 17/21 chrX 21598042
chrX:21598242 G
G
 C
C
 30 a0001c0001t0006g0155
a0001c0001t0006g0157
a0001c0001t0006g0159
others(27): Show 
a0001c0001t0006g0155
a0001c0001t0006g0157
a0001c0001t0006g0159
a0001c0001t0006g0160
a0001c0001t0006g0161
a0001c0001t0007g0140
a0001c0001t0009g0010
a0001c0001t0009g0011
a0001c0001t0009g0012
a0001c0001t0009g0013
a0001c0001t0010g0152
a0001c0001t0010g0153
a0001c0001t0010g0162
a0001c0001t0011g0016
a0001c0001t0011g0017
a0001c0001t0011g0138
a0001c0001t0012g0025
a0001c0001t0017g0018
a0001c0001t0019g0014
a0001c0001t0020g0141
a0001c0001t0022g0033
a0001c0001t0027g0034
a0001c0001t0041g0009
a0001c0001t0042g0008
a0001c0001t0043g0007
a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0006t0028g0059
a0001c0007t0036g0026
a0003c0004t0006g0154
 30 HG01071.hp2
HG01081.hp1
HG01243.hp1
others(27): Show 
HG01071.hp2
HG01081.hp1
HG01243.hp1
HG01884.hp1
HG01884.hp2
HG02055.hp1
HG02280.hp2
HG02486.hp1
HG02572.hp1
HG02615.hp1
HG02615.hp2
HG02647.hp1
HG02809.hp1
HG02886.hp1
HG02922.hp1
HG02922.hp2
HG02976.hp1
HG03041.hp1
HG03098.hp1
HG03130.hp1
HG03209.hp1
HG03225.hp1
HG03471.hp1
HG03486.hp1
HG03486.hp2
HG03491.hp2
HG03516.hp2
HG03579.hp1
NA18522.hp1
NA19240.hp2
 intron_variant MODIFIER c.1976+2847G>C
c.1976+2847G>C
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 17/21 chrX 21598242
chrX:21598252 A
A
 G
G
 6 a0001c0001t0002g0047
a0001c0001t0002g0049
a0001c0001t0002g0050
others(3): Show 
a0001c0001t0002g0047
a0001c0001t0002g0049
a0001c0001t0002g0050
a0001c0001t0002g0125
a0001c0001t0002g0126
a0001c0001t0008g0135
 6 NA18943.hp1
NA18944.hp1
NA19000.hp1
others(3): Show 
NA18943.hp1
NA18944.hp1
NA19000.hp1
NA19004.hp1
NA19076.hp1
NA19091.hp1
 intron_variant MODIFIER c.1976+2857A>G
c.1976+2857A>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 17/21 chrX 21598252
chrX:21598356 G
G
 GA
GA
 3 a0001c0001t0020g0141
a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0001t0020g0141
a0001c0003t0014g0147
a0001c0003t0014g0149
 3 HG01243.hp1
HG02615.hp1
HG03471.hp1
HG01243.hp1
HG02615.hp1
HG03471.hp1
 intron_variant MODIFIER c.1977-2925dupA
c.1977-2925dupA
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 17/21 INFO_REALIGN_3_PRIME chrX 21598356
chrX:21598969 C
C
 T
T
 4 a0001c0001t0007g0140
a0001c0001t0010g0152
a0001c0001t0010g0153
others(1): Show 
a0001c0001t0007g0140
a0001c0001t0010g0152
a0001c0001t0010g0153
a0001c0001t0010g0162
 4 HG02922.hp1
HG03209.hp1
HG03225.hp1
others(1): Show 
HG02922.hp1
HG03209.hp1
HG03225.hp1
NA19240.hp2
 intron_variant MODIFIER c.1977-2313C>T
c.1977-2313C>T
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 17/21 chrX 21598969
chrX:21598974 T
T
 C
C
 1 a0001c0001t0031g0065
a0001c0001t0031g0065
 1 HG02040.hp1
HG02040.hp1
 intron_variant MODIFIER c.1977-2308T>C
c.1977-2308T>C
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 17/21 chrX 21598974
chrX:21599324 G
G
 GT
GT
 4 a0001c0001t0001g0081
a0001c0001t0002g0047
a0001c0001t0022g0033
others(1): Show 
a0001c0001t0001g0081
a0001c0001t0002g0047
a0001c0001t0022g0033
a0001c0001t0027g0034
 4 HG02055.hp1
HG02486.hp1
NA19076.hp1
others(1): Show 
HG02055.hp1
HG02486.hp1
NA19076.hp1
NA19089.hp1
 intron_variant MODIFIER c.1977-1949dupT
c.1977-1949dupT
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 17/21 INFO_REALIGN_3_PRIME chrX 21599324
chrX:21599339 G
G
 GGT
GGT
 15 a0001c0001t0001g0001
a0001c0001t0001g0060
a0001c0001t0001g0158
others(12): Show 
a0001c0001t0001g0001
a0001c0001t0001g0060
a0001c0001t0001g0158
a0001c0001t0002g0004
a0001c0001t0002g0112
a0001c0001t0002g0113
a0001c0001t0002g0126
a0001c0001t0003g0031
a0001c0001t0006g0161
a0001c0001t0008g0005
a0001c0001t0008g0124
a0001c0001t0012g0045
a0001c0001t0017g0018
a0001c0001t0022g0033
a0001c0007t0036g0026
 15 HG00735.hp1
HG01069.hp1
HG01071.hp1
others(12): Show 
HG00735.hp1
HG01069.hp1
HG01071.hp1
HG01071.hp2
HG01081.hp1
HG01433.hp1
HG02055.hp1
HG02145.hp1
HG02976.hp1
HG02976.hp2
HG03041.hp2
HG03516.hp1
NA18943.hp1
NA19012.hp1
NA19068.hp1
 intron_variant MODIFIER c.1977-1899_1977-189
others(6): Show 
c.1977-1899_1977-1898dupTG
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 17/21 INFO_REALIGN_3_PRIME chrX 21599339
chrX:21599339 G
G
 GGTGT
GGTGT
 3 a0001c0001t0002g0043
a0001c0001t0002g0125
a0001c0001t0042g0008
a0001c0001t0002g0043
a0001c0001t0002g0125
a0001c0001t0042g0008
 3 HG02647.hp1
HG02809.hp2
NA19091.hp1
HG02647.hp1
HG02809.hp2
NA19091.hp1
 intron_variant MODIFIER c.1977-1901_1977-189
others(8): Show 
c.1977-1901_1977-1898dupTGTG
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 17/21 INFO_REALIGN_3_PRIME chrX 21599339
chrX:21599339 G
G
 GGTGTGT
GGTGTGT
 1 a0001c0001t0023g0006
a0001c0001t0023g0006
 1 HG03654.hp1
HG03654.hp1
 intron_variant MODIFIER c.1977-1903_1977-189
others(10): Show 
c.1977-1903_1977-1898dupTGTGTG
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 17/21 INFO_REALIGN_3_PRIME chrX 21599339
chrX:21599339 G
G
 GT
GT
 1 a0001c0001t0025g0130
a0001c0001t0025g0130
 1 NA19062.hp1
NA19062.hp1
 intron_variant MODIFIER c.1977-1943_1977-194
others(5): Show 
c.1977-1943_1977-1942insT
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 17/21 chrX 21599339
chrX:21599339 GGT
GGT
 G
G
 61 a0001c0001t0001g0035
a0001c0001t0001g0037
a0001c0001t0001g0039
others(58): Show 
a0001c0001t0001g0035
a0001c0001t0001g0037
a0001c0001t0001g0039
a0001c0001t0001g0051
a0001c0001t0001g0052
a0001c0001t0001g0062
a0001c0001t0001g0073
a0001c0001t0001g0078
a0001c0001t0001g0080
a0001c0001t0001g0082
a0001c0001t0001g0083
a0001c0001t0001g0084
a0001c0001t0001g0087
a0001c0001t0001g0089
a0001c0001t0001g0090
a0001c0001t0001g0094
a0001c0001t0001g0096
a0001c0001t0001g0097
a0001c0001t0001g0102
a0001c0001t0001g0103
a0001c0001t0001g0128
a0001c0001t0001g0131
a0001c0001t0001g0137
a0001c0001t0001g0145
a0001c0001t0002g0114
a0001c0001t0002g0115
a0001c0001t0003g0044
a0001c0001t0003g0070
a0001c0001t0003g0101
a0001c0001t0004g0055
a0001c0001t0004g0056
a0001c0001t0005g0095
a0001c0001t0005g0099
a0001c0001t0006g0155
a0001c0001t0006g0157
a0001c0001t0006g0159
a0001c0001t0006g0160
a0001c0001t0007g0127
a0001c0001t0010g0152
a0001c0001t0010g0153
a0001c0001t0010g0162
a0001c0001t0011g0017
a0001c0001t0012g0142
a0001c0001t0016g0085
a0001c0001t0018g0123
a0001c0001t0019g0014
a0001c0001t0020g0141
a0001c0001t0021g0088
a0001c0001t0029g0023
a0001c0001t0030g0086
a0001c0001t0031g0065
a0001c0001t0033g0002
a0001c0001t0035g0054
a0001c0002t0001g0104
a0001c0002t0001g0105
a0001c0002t0001g0107
a0001c0002t0001g0108
a0001c0002t0005g0106
a0001c0002t0007g0041
a0001c0006t0028g0059
a0002c0005t0003g0030
 61 HG00140.hp1
HG00642.hp1
HG00741.hp1
others(58): Show 
HG00140.hp1
HG00642.hp1
HG00741.hp1
HG01074.hp1
HG01099.hp1
HG01243.hp1
HG01255.hp1
HG01258.hp1
HG01261.hp1
HG01358.hp1
HG01515.hp1
HG01884.hp2
HG01928.hp1
HG01943.hp1
HG02040.hp1
HG02056.hp1
HG02129.hp1
HG02135.hp1
HG02300.hp1
HG02615.hp2
HG02886.hp1
HG02886.hp2
HG02922.hp2
HG03130.hp1
HG03139.hp1
HG03209.hp1
HG03225.hp1
HG03490.hp1
HG03491.hp1
HG03492.hp1
HG03516.hp2
HG03579.hp1
HG03710.hp1
HG03942.hp1
HG04199.hp1
HG04228.hp1
NA18747.hp1
NA18959.hp1
NA18960.hp1
NA18967.hp1
NA18971.hp1
NA18974.hp1
NA18977.hp1
NA18984.hp1
NA18988.hp1
NA18994.hp1
NA18995.hp1
NA19005.hp1
NA19006.hp1
NA19007.hp1
NA19009.hp1
NA19056.hp1
NA19060.hp1
NA19066.hp1
NA19072.hp1
NA19079.hp1
NA19082.hp1
NA19088.hp1
NA19240.hp2
NA20300.hp1
NA20905.hp1
 intron_variant MODIFIER c.1977-1899_1977-189
others(6): Show 
c.1977-1899_1977-1898delTG
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 17/21 INFO_REALIGN_3_PRIME chrX 21599339
chrX:21599339 GGTGT
GGTGT
 G
G
 39 a0001c0001t0001g0048
a0001c0001t0001g0053
a0001c0001t0001g0067
others(36): Show 
a0001c0001t0001g0048
a0001c0001t0001g0053
a0001c0001t0001g0067
a0001c0001t0001g0068
a0001c0001t0001g0069
a0001c0001t0001g0071
a0001c0001t0001g0074
a0001c0001t0001g0075
a0001c0001t0001g0076
a0001c0001t0001g0081
a0001c0001t0001g0093
a0001c0001t0001g0109
a0001c0001t0001g0134
a0001c0001t0002g0019
a0001c0001t0002g0111
a0001c0001t0002g0121
a0001c0001t0003g0061
a0001c0001t0003g0116
a0001c0001t0003g0133
a0001c0001t0003g0136
a0001c0001t0004g0020
a0001c0001t0004g0021
a0001c0001t0004g0057
a0001c0001t0004g0064
a0001c0001t0004g0117
a0001c0001t0005g0063
a0001c0001t0005g0072
a0001c0001t0009g0011
a0001c0001t0009g0012
a0001c0001t0009g0013
a0001c0001t0013g0066
a0001c0001t0013g0100
a0001c0001t0015g0038
a0001c0001t0015g0098
a0001c0001t0016g0032
a0001c0001t0032g0163
a0001c0001t0034g0091
a0001c0001t0037g0092
a0001c0003t0026g0148
 39 HG00280.hp1
HG00673.hp1
HG00738.hp1
others(36): Show 
HG00280.hp1
HG00673.hp1
HG00738.hp1
HG00741.hp2
HG01106.hp1
HG01167.hp1
HG01192.hp1
HG01256.hp1
HG01952.hp1
HG02015.hp1
HG02071.hp1
HG02572.hp1
HG02602.hp1
HG02735.hp1
HG02738.hp1
HG02809.hp1
HG02965.hp1
HG03017.hp1
HG03486.hp1
HG03688.hp1
HG04204.hp1
NA18612.hp1
NA18945.hp1
NA18948.hp1
NA18952.hp1
NA18953.hp1
NA18955.hp1
NA18962.hp1
NA18965.hp1
NA18970.hp1
NA18982.hp1
NA18983.hp1
NA18989.hp1
NA19058.hp1
NA19063.hp1
NA19085.hp1
NA19089.hp1
NA20805.hp1
homoSapiens_chm13v2.hp1
 intron_variant MODIFIER c.1977-1901_1977-189
others(8): Show 
c.1977-1901_1977-1898delTGTG
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 17/21 INFO_REALIGN_3_PRIME chrX 21599339
chrX:21599339 GGTGTGT
GGTGTGT
 G
G
 4 a0001c0001t0001g0036
a0001c0001t0001g0058
a0001c0001t0004g0129
others(1): Show 
a0001c0001t0001g0036
a0001c0001t0001g0058
a0001c0001t0004g0129
a0001c0001t0027g0034
 4 HG00609.hp1
HG02486.hp1
HG02698.hp1
others(1): Show 
HG00609.hp1
HG02486.hp1
HG02698.hp1
HG04115.hp1
 intron_variant MODIFIER c.1977-1903_1977-189
others(10): Show 
c.1977-1903_1977-1898delTGTGTG
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 17/21 INFO_REALIGN_3_PRIME chrX 21599339
chrX:21599348 G
G
 A
A
 1 a0001c0001t0002g0110
a0001c0001t0002g0110
 1 HG02074.hp1
HG02074.hp1
 intron_variant MODIFIER c.1977-1934G>A
c.1977-1934G>A
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 17/21 chrX 21599348
chrX:21599381 TGTGA
TGTGA
 T
T
 1 a0001c0001t0038g0150
a0001c0001t0038g0150
 1 NA19240.hp1
NA19240.hp1
 intron_variant MODIFIER c.1977-1899_1977-189
others(8): Show 
c.1977-1899_1977-1896delTGAG
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 17/21 INFO_REALIGN_3_PRIME chrX 21599381
chrX:21599383 T
T
 TGA
TGA
 1 a0001c0002t0001g0042
a0001c0002t0001g0042
 1 HG01934.hp1
HG01934.hp1
 intron_variant MODIFIER c.1977-1896_1977-189
others(6): Show 
c.1977-1896_1977-1895dupGA
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 17/21 INFO_REALIGN_3_PRIME chrX 21599383
chrX:21599383 TGA
TGA
 T
T
 6 a0001c0001t0002g0028
a0001c0001t0003g0015
a0001c0001t0003g0024
others(3): Show 
a0001c0001t0002g0028
a0001c0001t0003g0015
a0001c0001t0003g0024
a0001c0001t0003g0151
a0001c0001t0012g0025
a0001c0001t0040g0027
 6 HG01081.hp2
HG02258.hp1
HG02280.hp1
others(3): Show 
HG01081.hp2
HG02258.hp1
HG02280.hp1
HG02717.hp1
HG03486.hp2
NA19043.hp1
 intron_variant MODIFIER c.1977-1896_1977-189
others(6): Show 
c.1977-1896_1977-1895delGA
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 17/21 INFO_REALIGN_3_PRIME chrX 21599383
chrX:21599896 A
A
 G
G
 1 a0001c0001t0017g0018
a0001c0001t0017g0018
 1 HG01071.hp2
HG01071.hp2
 intron_variant MODIFIER c.1977-1386A>G
c.1977-1386A>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 17/21 chrX 21599896
chrX:21600039 A
A
 C
C
 2 a0001c0001t0012g0045
a0001c0001t0020g0141
a0001c0001t0012g0045
a0001c0001t0020g0141
 2 HG01243.hp1
HG02145.hp1
HG01243.hp1
HG02145.hp1
 intron_variant MODIFIER c.1977-1243A>C
c.1977-1243A>C
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 17/21 chrX 21600039
chrX:21600112 C
C
 G
G
 3 a0001c0001t0001g0039
a0001c0001t0001g0082
a0001c0001t0001g0084
a0001c0001t0001g0039
a0001c0001t0001g0082
a0001c0001t0001g0084
 3 HG00642.hp1
HG01261.hp1
HG01928.hp1
HG00642.hp1
HG01261.hp1
HG01928.hp1
 intron_variant MODIFIER c.1977-1170C>G
c.1977-1170C>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 17/21 chrX 21600112
chrX:21600427 C
C
 T
T
 1 a0001c0001t0012g0045
a0001c0001t0012g0045
 1 HG02145.hp1
HG02145.hp1
 intron_variant MODIFIER c.1977-855C>T
c.1977-855C>T
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 17/21 chrX 21600427
chrX:21600880 C
C
 T
T
 1 a0001c0001t0017g0146
a0001c0001t0017g0146
 1 HG01109.hp1
HG01109.hp1
 intron_variant MODIFIER c.1977-402C>T
c.1977-402C>T
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 17/21 chrX 21600880
chrX:21601450 AT
AT
 A
A
 1 a0001c0001t0001g0078
a0001c0001t0001g0078
 1 NA19009.hp1
NA19009.hp1
 intron_variant MODIFIER c.2044+106delT
c.2044+106delT
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 18/21 INFO_REALIGN_3_PRIME chrX 21601450
chrX:21601563 A
A
 AC
AC
 1 a0001c0001t0002g0003
a0001c0001t0002g0003
 1 HG00621.hp1
HG00621.hp1
 intron_variant MODIFIER c.2044+219dupC
c.2044+219dupC
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 18/21 INFO_REALIGN_3_PRIME chrX 21601563
chrX:21601949 G
G
 A
A
 3 a0001c0001t0011g0016
a0001c0001t0011g0017
a0001c0001t0011g0138
a0001c0001t0011g0016
a0001c0001t0011g0017
a0001c0001t0011g0138
 3 HG03041.hp1
HG03579.hp1
NA18522.hp1
HG03041.hp1
HG03579.hp1
NA18522.hp1
 intron_variant MODIFIER c.2044+600G>A
c.2044+600G>A
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 18/21 chrX 21601949
chrX:21602125 T
T
 TTTTG
TTTTG
 1 a0001c0001t0004g0021
a0001c0001t0004g0021
 1 HG01256.hp1
HG01256.hp1
 intron_variant MODIFIER c.2044+800_2044+803d
others(6): Show 
c.2044+800_2044+803dupGTTT
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 18/21 INFO_REALIGN_3_PRIME chrX 21602125
chrX:21602129 G
G
 T
T
 7 a0001c0001t0007g0140
a0001c0001t0010g0152
a0001c0001t0010g0153
others(4): Show 
a0001c0001t0007g0140
a0001c0001t0010g0152
a0001c0001t0010g0153
a0001c0001t0010g0162
a0001c0001t0017g0018
a0001c0003t0014g0147
a0001c0003t0014g0149
 7 HG01071.hp2
HG02615.hp1
HG02922.hp1
others(4): Show 
HG01071.hp2
HG02615.hp1
HG02922.hp1
HG03209.hp1
HG03225.hp1
HG03471.hp1
NA19240.hp2
 intron_variant MODIFIER c.2044+780G>T
c.2044+780G>T
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 18/21 chrX 21602129
chrX:21602164 C
C
 T
T
 1 a0001c0003t0014g0149
a0001c0003t0014g0149
 1 HG03471.hp1
HG03471.hp1
 intron_variant MODIFIER c.2044+815C>T
c.2044+815C>T
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 18/21 chrX 21602164
chrX:21602194 G
G
 A
A
 3 a0001c0001t0010g0152
a0001c0001t0010g0153
a0001c0001t0010g0162
a0001c0001t0010g0152
a0001c0001t0010g0153
a0001c0001t0010g0162
 3 HG03209.hp1
HG03225.hp1
NA19240.hp2
HG03209.hp1
HG03225.hp1
NA19240.hp2
 intron_variant MODIFIER c.2044+845G>A
c.2044+845G>A
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 18/21 chrX 21602194
chrX:21602229 C
C
 T
T
 2 a0001c0001t0002g0113
a0001c0001t0029g0023
a0001c0001t0002g0113
a0001c0001t0029g0023
 2 HG00735.hp1
HG01099.hp1
HG00735.hp1
HG01099.hp1
 intron_variant MODIFIER c.2044+880C>T
c.2044+880C>T
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 18/21 chrX 21602229
chrX:21602504 A
A
 C
C
 3 a0001c0001t0011g0016
a0001c0001t0011g0017
a0001c0001t0011g0138
a0001c0001t0011g0016
a0001c0001t0011g0017
a0001c0001t0011g0138
 3 HG03041.hp1
HG03579.hp1
NA18522.hp1
HG03041.hp1
HG03579.hp1
NA18522.hp1
 intron_variant MODIFIER c.2044+1155A>C
c.2044+1155A>C
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 18/21 chrX 21602504
chrX:21602736 G
G
 T
T
 3 a0001c0001t0001g0058
a0001c0001t0001g0096
a0001c0001t0030g0086
a0001c0001t0001g0058
a0001c0001t0001g0096
a0001c0001t0030g0086
 3 HG02698.hp1
HG03710.hp1
HG04199.hp1
HG02698.hp1
HG03710.hp1
HG04199.hp1
 intron_variant MODIFIER c.2044+1387G>T
c.2044+1387G>T
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 18/21 chrX 21602736
chrX:21602939 C
C
 G
G
 8 a0001c0001t0002g0028
a0001c0001t0003g0015
a0001c0001t0003g0024
others(5): Show 
a0001c0001t0002g0028
a0001c0001t0003g0015
a0001c0001t0003g0024
a0001c0001t0003g0151
a0001c0001t0012g0025
a0001c0001t0017g0146
a0001c0001t0038g0150
a0001c0001t0040g0027
 8 HG01081.hp2
HG01109.hp1
HG02258.hp1
others(5): Show 
HG01081.hp2
HG01109.hp1
HG02258.hp1
HG02280.hp1
HG02717.hp1
HG03486.hp2
NA19043.hp1
NA19240.hp1
 intron_variant MODIFIER c.2044+1590C>G
c.2044+1590C>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 18/21 chrX 21602939
chrX:21603100 A
A
 G
G
 1 a0001c0001t0002g0019
a0001c0001t0002g0019
 1 HG01106.hp1
HG01106.hp1
 intron_variant MODIFIER c.2044+1751A>G
c.2044+1751A>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 18/21 chrX 21603100
chrX:21603372 C
C
 A
A
 6 a0001c0001t0007g0140
a0001c0001t0010g0152
a0001c0001t0010g0153
others(3): Show 
a0001c0001t0007g0140
a0001c0001t0010g0152
a0001c0001t0010g0153
a0001c0001t0010g0162
a0001c0003t0014g0147
a0001c0003t0014g0149
 6 HG02615.hp1
HG02922.hp1
HG03209.hp1
others(3): Show 
HG02615.hp1
HG02922.hp1
HG03209.hp1
HG03225.hp1
HG03471.hp1
NA19240.hp2
 intron_variant MODIFIER c.2044+2023C>A
c.2044+2023C>A
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 18/21 chrX 21603372
chrX:21603400 A
A
 G
G
 1 a0001c0001t0003g0151
a0001c0001t0003g0151
 1 HG01081.hp2
HG01081.hp2
 intron_variant MODIFIER c.2044+2051A>G
c.2044+2051A>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 18/21 chrX 21603400
chrX:21604030 G
G
 A
A
 4 a0001c0001t0011g0016
a0001c0001t0011g0017
a0001c0001t0011g0138
others(1): Show 
a0001c0001t0011g0016
a0001c0001t0011g0017
a0001c0001t0011g0138
a0001c0001t0012g0025
 4 HG03041.hp1
HG03486.hp2
HG03579.hp1
others(1): Show 
HG03041.hp1
HG03486.hp2
HG03579.hp1
NA18522.hp1
 intron_variant MODIFIER c.2044+2681G>A
c.2044+2681G>A
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 18/21 chrX 21604030
chrX:21604470 A
A
 AAT
AAT
 5 a0001c0001t0010g0152
a0001c0001t0010g0153
a0001c0001t0010g0162
others(2): Show 
a0001c0001t0010g0152
a0001c0001t0010g0153
a0001c0001t0010g0162
a0001c0001t0017g0018
a0001c0001t0019g0014
 5 HG01071.hp2
HG01884.hp2
HG03209.hp1
others(2): Show 
HG01071.hp2
HG01884.hp2
HG03209.hp1
HG03225.hp1
NA19240.hp2
 intron_variant MODIFIER c.2045-2299_2045-229
others(6): Show 
c.2045-2299_2045-2298dupTA
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 18/21 INFO_REALIGN_3_PRIME chrX 21604470
chrX:21605313 A
A
 G
G
 2 a0001c0001t0001g0089
a0001c0001t0001g0128
a0001c0001t0001g0089
a0001c0001t0001g0128
 2 NA19066.hp1
NA19088.hp1
NA19066.hp1
NA19088.hp1
 intron_variant MODIFIER c.2045-1466A>G
c.2045-1466A>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 18/21 chrX 21605313
chrX:21605357 T
T
 C
C
 2 a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0014g0147
a0001c0003t0014g0149
 2 HG02615.hp1
HG03471.hp1
HG02615.hp1
HG03471.hp1
 intron_variant MODIFIER c.2045-1422T>C
c.2045-1422T>C
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 18/21 chrX 21605357
chrX:21605515 A
A
 G
G
 1 a0001c0001t0002g0046
a0001c0001t0002g0046
 1 HG02083.hp1
HG02083.hp1
 intron_variant MODIFIER c.2045-1264A>G
c.2045-1264A>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 18/21 chrX 21605515
chrX:21605639 A
A
 G
G
 7 a0001c0001t0006g0155
a0001c0001t0006g0157
a0001c0001t0006g0159
others(4): Show 
a0001c0001t0006g0155
a0001c0001t0006g0157
a0001c0001t0006g0159
a0001c0001t0006g0160
a0001c0001t0006g0161
a0001c0006t0028g0059
a0003c0004t0006g0154
 7 HG01884.hp1
HG02615.hp2
HG02886.hp1
others(4): Show 
HG01884.hp1
HG02615.hp2
HG02886.hp1
HG02922.hp2
HG02976.hp1
HG03130.hp1
HG03516.hp2
 intron_variant MODIFIER c.2045-1140A>G
c.2045-1140A>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 18/21 chrX 21605639
chrX:21605646 TC
TC
 T
T
 3 a0001c0001t0005g0079
a0001c0001t0005g0095
a0001c0001t0005g0099
a0001c0001t0005g0079
a0001c0001t0005g0095
a0001c0001t0005g0099
 3 NA18747.hp1
NA18960.hp1
NA18961.hp1
NA18747.hp1
NA18960.hp1
NA18961.hp1
 intron_variant MODIFIER c.2045-1132delC
c.2045-1132delC
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 18/21 chrX 21605646
chrX:21605754 G
G
 A
A
 1 a0001c0001t0003g0031
a0001c0001t0003g0031
 1 HG02976.hp2
HG02976.hp2
 intron_variant MODIFIER c.2045-1025G>A
c.2045-1025G>A
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 18/21 chrX 21605754
chrX:21605769 C
C
 T
T
 9 a0001c0001t0002g0028
a0001c0001t0003g0015
a0001c0001t0003g0024
others(6): Show 
a0001c0001t0002g0028
a0001c0001t0003g0015
a0001c0001t0003g0024
a0001c0001t0003g0151
a0001c0001t0017g0146
a0001c0001t0038g0150
a0001c0001t0040g0027
a0001c0003t0026g0148
a0002c0005t0003g0030
 9 HG01081.hp2
HG01109.hp1
HG02258.hp1
others(6): Show 
HG01081.hp2
HG01109.hp1
HG02258.hp1
HG02280.hp1
HG02717.hp1
HG02886.hp2
HG02965.hp1
NA19043.hp1
NA19240.hp1
 intron_variant MODIFIER c.2045-1010C>T
c.2045-1010C>T
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 18/21 chrX 21605769
chrX:21605882 A
A
 G
G
 1 a0001c0001t0001g0076
a0001c0001t0001g0076
 1 NA18982.hp1
NA18982.hp1
 intron_variant MODIFIER c.2045-897A>G
c.2045-897A>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 18/21 chrX 21605882
chrX:21605982 T
T
 C
C
 3 a0001c0001t0020g0141
a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0001t0020g0141
a0001c0003t0014g0147
a0001c0003t0014g0149
 3 HG01243.hp1
HG02615.hp1
HG03471.hp1
HG01243.hp1
HG02615.hp1
HG03471.hp1
 intron_variant MODIFIER c.2045-797T>C
c.2045-797T>C
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 18/21 chrX 21605982
chrX:21606228 G
G
 A
A
 2 a0001c0001t0002g0004
a0001c0001t0008g0005
a0001c0001t0002g0004
a0001c0001t0008g0005
 2 HG01069.hp1
HG01071.hp1
HG01069.hp1
HG01071.hp1
 intron_variant MODIFIER c.2045-551G>A
c.2045-551G>A
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 18/21 chrX 21606228
chrX:21606430 A
A
 G
G
 1 a0001c0001t0002g0028
a0001c0001t0002g0028
 1 HG02258.hp1
HG02258.hp1
 intron_variant MODIFIER c.2045-349A>G
c.2045-349A>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 18/21 chrX 21606430
chrX:21607315 G
G
 A
A
 1 a0001c0001t0002g0043
a0001c0001t0002g0043
 1 HG02809.hp2
HG02809.hp2
 intron_variant MODIFIER c.2145+436G>A
c.2145+436G>A
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 19/21 chrX 21607315
chrX:21608603 T
T
 C
C
 1 a0001c0001t0042g0008
a0001c0001t0042g0008
 1 HG02647.hp1
HG02647.hp1
 intron_variant MODIFIER c.2146-468T>C
c.2146-468T>C
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 19/21 chrX 21608603
chrX:21608624 T
T
 C
C
 2 a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0014g0147
a0001c0003t0014g0149
 2 HG02615.hp1
HG03471.hp1
HG02615.hp1
HG03471.hp1
 intron_variant MODIFIER c.2146-447T>C
c.2146-447T>C
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 19/21 chrX 21608624
chrX:21608740 T
T
 G
G
 1 a0001c0001t0017g0018
a0001c0001t0017g0018
 1 HG01071.hp2
HG01071.hp2
 intron_variant MODIFIER c.2146-331T>G
c.2146-331T>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 19/21 chrX 21608740
chrX:21609807 T
T
 C
C
 1 a0001c0001t0023g0006
a0001c0001t0023g0006
 1 HG03654.hp1
HG03654.hp1
 intron_variant MODIFIER c.2692+190T>C
c.2692+190T>C
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 20/21 chrX 21609807
chrX:21609852 T
T
 G
G
 4 a0001c0001t0007g0140
a0001c0001t0010g0152
a0001c0001t0010g0153
others(1): Show 
a0001c0001t0007g0140
a0001c0001t0010g0152
a0001c0001t0010g0153
a0001c0001t0010g0162
 4 HG02922.hp1
HG03209.hp1
HG03225.hp1
others(1): Show 
HG02922.hp1
HG03209.hp1
HG03225.hp1
NA19240.hp2
 intron_variant MODIFIER c.2692+235T>G
c.2692+235T>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 20/21 chrX 21609852
chrX:21609973 G
G
 A
A
 1 a0001c0001t0017g0018
a0001c0001t0017g0018
 1 HG01071.hp2
HG01071.hp2
 intron_variant MODIFIER c.2692+356G>A
c.2692+356G>A
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 20/21 chrX 21609973
chrX:21610138 G
G
 A
A
 2 a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0014g0147
a0001c0003t0014g0149
 2 HG02615.hp1
HG03471.hp1
HG02615.hp1
HG03471.hp1
 intron_variant MODIFIER c.2692+521G>A
c.2692+521G>A
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 20/21 chrX 21610138
chrX:21610250 C
C
 T
T
 1 a0001c0001t0003g0031
a0001c0001t0003g0031
 1 HG02976.hp2
HG02976.hp2
 intron_variant MODIFIER c.2692+633C>T
c.2692+633C>T
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 20/21 chrX 21610250
chrX:21610334 T
T
 C
C
 9 a0001c0001t0006g0155
a0001c0001t0006g0157
a0001c0001t0006g0159
others(6): Show 
a0001c0001t0006g0155
a0001c0001t0006g0157
a0001c0001t0006g0159
a0001c0001t0006g0160
a0001c0001t0006g0161
a0001c0001t0017g0018
a0001c0001t0043g0007
a0001c0006t0028g0059
a0003c0004t0006g0154
 9 HG01071.hp2
HG01884.hp1
HG02615.hp2
others(6): Show 
HG01071.hp2
HG01884.hp1
HG02615.hp2
HG02886.hp1
HG02922.hp2
HG02976.hp1
HG03130.hp1
HG03491.hp2
HG03516.hp2
 intron_variant MODIFIER c.2692+717T>C
c.2692+717T>C
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 20/21 chrX 21610334
chrX:21611299 T
T
 A
A
 1 a0001c0001t0019g0014
a0001c0001t0019g0014
 1 HG01884.hp2
HG01884.hp2
 intron_variant MODIFIER c.2692+1682T>A
c.2692+1682T>A
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 20/21 chrX 21611299
chrX:21611697 G
G
 C
C
 1 a0001c0007t0036g0026
a0001c0007t0036g0026
 1 HG01081.hp1
HG01081.hp1
 intron_variant MODIFIER c.2692+2080G>C
c.2692+2080G>C
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 20/21 chrX 21611697
chrX:21611739 C
C
 A
A
 1 a0001c0001t0007g0140
a0001c0001t0007g0140
 1 HG02922.hp1
HG02922.hp1
 intron_variant MODIFIER c.2692+2122C>A
c.2692+2122C>A
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 20/21 chrX 21611739
chrX:21611893 ACT
ACT
 A
A
 2 a0001c0001t0022g0033
a0001c0001t0027g0034
a0001c0001t0022g0033
a0001c0001t0027g0034
 2 HG02055.hp1
HG02486.hp1
HG02055.hp1
HG02486.hp1
 intron_variant MODIFIER c.2692+2277_2692+227
others(6): Show 
c.2692+2277_2692+2278delCT
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 20/21 chrX 21611893
chrX:21612694 G
G
 C
C
 2 a0001c0001t0023g0006
a0001c0001t0043g0007
a0001c0001t0023g0006
a0001c0001t0043g0007
 2 HG03491.hp2
HG03654.hp1
HG03491.hp2
HG03654.hp1
 intron_variant MODIFIER c.2692+3077G>C
c.2692+3077G>C
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 20/21 chrX 21612694
chrX:21613484 C
C
 T
T
 1 a0001c0001t0012g0142
a0001c0001t0012g0142
 1 HG03139.hp1
HG03139.hp1
 intron_variant MODIFIER c.2692+3867C>T
c.2692+3867C>T
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 20/21 chrX 21613484
chrX:21613821 TC
TC
 T
T
 1 a0001c0001t0039g0144
a0001c0001t0039g0144
 1 NA19055.hp1
NA19055.hp1
 intron_variant MODIFIER c.2692+4207delC
c.2692+4207delC
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 20/21 INFO_REALIGN_3_PRIME chrX 21613821
chrX:21613939 C
C
 CA
CA
 5 a0001c0001t0002g0114
a0001c0001t0011g0016
a0001c0001t0011g0017
others(2): Show 
a0001c0001t0002g0114
a0001c0001t0011g0016
a0001c0001t0011g0017
a0001c0001t0011g0138
a0001c0001t0012g0025
 5 HG00140.hp1
HG03041.hp1
HG03486.hp2
others(2): Show 
HG00140.hp1
HG03041.hp1
HG03486.hp2
HG03579.hp1
NA18522.hp1
 intron_variant MODIFIER c.2692+4336dupA
c.2692+4336dupA
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 20/21 INFO_REALIGN_3_PRIME chrX 21613939
chrX:21613939 CA
CA
 C
C
 1 a0001c0001t0007g0140
a0001c0001t0007g0140
 1 HG02922.hp1
HG02922.hp1
 intron_variant MODIFIER c.2692+4336delA
c.2692+4336delA
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 20/21 INFO_REALIGN_3_PRIME chrX 21613939
chrX:21614121 G
G
 A
A
 1 a0001c0001t0001g0037
a0001c0001t0001g0037
 1 HG02135.hp1
HG02135.hp1
 intron_variant MODIFIER c.2692+4504G>A
c.2692+4504G>A
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 20/21 chrX 21614121
chrX:21614585 T
T
 TA
TA
 23 a0001c0001t0003g0024
a0001c0001t0003g0029
a0001c0001t0006g0155
others(20): Show 
a0001c0001t0003g0024
a0001c0001t0003g0029
a0001c0001t0006g0155
a0001c0001t0006g0157
a0001c0001t0006g0159
a0001c0001t0006g0160
a0001c0001t0006g0161
a0001c0001t0009g0010
a0001c0001t0009g0011
a0001c0001t0009g0012
a0001c0001t0009g0013
a0001c0001t0011g0016
a0001c0001t0011g0017
a0001c0001t0011g0138
a0001c0001t0012g0025
a0001c0001t0017g0018
a0001c0001t0019g0014
a0001c0001t0023g0006
a0001c0001t0041g0009
a0001c0001t0042g0008
a0001c0001t0043g0007
a0001c0006t0028g0059
a0003c0004t0006g0154
 23 HG01071.hp2
HG01884.hp1
HG01884.hp2
others(20): Show 
HG01071.hp2
HG01884.hp1
HG01884.hp2
HG02280.hp1
HG02280.hp2
HG02572.hp1
HG02615.hp2
HG02647.hp1
HG02809.hp1
HG02886.hp1
HG02895.hp1
HG02922.hp2
HG02976.hp1
HG03041.hp1
HG03098.hp1
HG03130.hp1
HG03486.hp1
HG03486.hp2
HG03491.hp2
HG03516.hp2
HG03579.hp1
HG03654.hp1
NA18522.hp1
 intron_variant MODIFIER c.2692+4976dupA
c.2692+4976dupA
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 20/21 INFO_REALIGN_3_PRIME chrX 21614585
chrX:21614712 G
G
 T
T
 1 a0001c0001t0022g0033
a0001c0001t0022g0033
 1 HG02055.hp1
HG02055.hp1
 intron_variant MODIFIER c.2692+5095G>T
c.2692+5095G>T
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 20/21 chrX 21614712
chrX:21614716 G
G
 C
C
 1 a0001c0001t0024g0156
a0001c0001t0024g0156
 1 NA20300.hp2
NA20300.hp2
 intron_variant MODIFIER c.2692+5099G>C
c.2692+5099G>C
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 20/21 chrX 21614716
chrX:21615092 A
A
 G
G
 162 a0001c0001t0001g0001
a0001c0001t0001g0035
a0001c0001t0001g0036
others(159): Show 
a0001c0001t0001g0001
a0001c0001t0001g0035
a0001c0001t0001g0036
a0001c0001t0001g0037
a0001c0001t0001g0039
a0001c0001t0001g0048
a0001c0001t0001g0051
a0001c0001t0001g0052
a0001c0001t0001g0053
a0001c0001t0001g0058
a0001c0001t0001g0060
a0001c0001t0001g0062
a0001c0001t0001g0067
a0001c0001t0001g0068
a0001c0001t0001g0069
a0001c0001t0001g0071
a0001c0001t0001g0073
a0001c0001t0001g0074
a0001c0001t0001g0075
a0001c0001t0001g0076
a0001c0001t0001g0077
a0001c0001t0001g0078
a0001c0001t0001g0080
a0001c0001t0001g0081
a0001c0001t0001g0082
a0001c0001t0001g0083
a0001c0001t0001g0084
a0001c0001t0001g0087
a0001c0001t0001g0089
a0001c0001t0001g0090
a0001c0001t0001g0093
a0001c0001t0001g0094
a0001c0001t0001g0096
a0001c0001t0001g0097
a0001c0001t0001g0102
a0001c0001t0001g0103
a0001c0001t0001g0109
a0001c0001t0001g0128
a0001c0001t0001g0131
a0001c0001t0001g0134
a0001c0001t0001g0137
a0001c0001t0001g0145
a0001c0001t0001g0158
a0001c0001t0002g0003
a0001c0001t0002g0004
a0001c0001t0002g0019
a0001c0001t0002g0028
a0001c0001t0002g0043
a0001c0001t0002g0046
a0001c0001t0002g0047
a0001c0001t0002g0049
a0001c0001t0002g0050
a0001c0001t0002g0110
a0001c0001t0002g0111
a0001c0001t0002g0112
a0001c0001t0002g0113
a0001c0001t0002g0114
a0001c0001t0002g0115
a0001c0001t0002g0118
a0001c0001t0002g0119
a0001c0001t0002g0120
a0001c0001t0002g0121
a0001c0001t0002g0122
a0001c0001t0002g0125
a0001c0001t0002g0126
a0001c0001t0003g0015
a0001c0001t0003g0024
a0001c0001t0003g0029
a0001c0001t0003g0031
a0001c0001t0003g0044
a0001c0001t0003g0061
a0001c0001t0003g0070
a0001c0001t0003g0101
a0001c0001t0003g0116
a0001c0001t0003g0133
a0001c0001t0003g0136
a0001c0001t0003g0151
a0001c0001t0004g0020
a0001c0001t0004g0021
a0001c0001t0004g0055
a0001c0001t0004g0056
a0001c0001t0004g0057
a0001c0001t0004g0064
a0001c0001t0004g0117
a0001c0001t0004g0129
a0001c0001t0004g0132
a0001c0001t0005g0063
a0001c0001t0005g0072
a0001c0001t0005g0079
a0001c0001t0005g0095
a0001c0001t0005g0099
a0001c0001t0006g0155
a0001c0001t0006g0157
a0001c0001t0006g0159
a0001c0001t0006g0160
a0001c0001t0006g0161
a0001c0001t0007g0022
a0001c0001t0007g0127
a0001c0001t0007g0140
a0001c0001t0008g0005
a0001c0001t0008g0124
a0001c0001t0008g0135
a0001c0001t0008g0143
a0001c0001t0009g0010
a0001c0001t0009g0011
a0001c0001t0009g0012
a0001c0001t0009g0013
a0001c0001t0010g0152
a0001c0001t0010g0153
a0001c0001t0010g0162
a0001c0001t0011g0016
a0001c0001t0011g0017
a0001c0001t0011g0138
a0001c0001t0012g0025
a0001c0001t0012g0045
a0001c0001t0012g0142
a0001c0001t0013g0066
a0001c0001t0013g0100
a0001c0001t0015g0038
a0001c0001t0015g0098
a0001c0001t0016g0032
a0001c0001t0016g0085
a0001c0001t0017g0018
a0001c0001t0017g0146
a0001c0001t0018g0123
a0001c0001t0019g0014
a0001c0001t0020g0141
a0001c0001t0021g0088
a0001c0001t0022g0033
a0001c0001t0023g0006
a0001c0001t0024g0156
a0001c0001t0025g0130
a0001c0001t0027g0034
a0001c0001t0029g0023
a0001c0001t0030g0086
a0001c0001t0031g0065
a0001c0001t0032g0163
a0001c0001t0033g0002
a0001c0001t0034g0091
a0001c0001t0035g0054
a0001c0001t0037g0092
a0001c0001t0038g0150
a0001c0001t0039g0144
a0001c0001t0040g0027
a0001c0001t0041g0009
a0001c0001t0042g0008
a0001c0001t0043g0007
a0001c0002t0001g0042
a0001c0002t0001g0104
a0001c0002t0001g0105
a0001c0002t0001g0107
a0001c0002t0001g0108
a0001c0002t0005g0106
a0001c0002t0007g0040
a0001c0002t0007g0041
a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
a0001c0006t0028g0059
a0001c0007t0036g0026
a0002c0005t0003g0030
a0003c0004t0006g0154
 162 HG00140.hp1
HG00280.hp1
HG00609.hp1
others(159): Show 
HG00140.hp1
HG00280.hp1
HG00609.hp1
HG00621.hp1
HG00642.hp1
HG00673.hp1
HG00735.hp1
HG00735.hp2
HG00738.hp1
HG00741.hp1
HG00741.hp2
HG01069.hp1
HG01071.hp1
HG01071.hp2
HG01074.hp1
HG01081.hp1
HG01081.hp2
HG01099.hp1
HG01106.hp1
HG01109.hp1
HG01167.hp1
HG01192.hp1
HG01243.hp1
HG01255.hp1
HG01256.hp1
HG01258.hp1
HG01261.hp1
HG01358.hp1
HG01433.hp1
HG01515.hp1
HG01884.hp1
HG01884.hp2
HG01928.hp1
HG01934.hp1
HG01943.hp1
HG01952.hp1
HG02015.hp1
HG02027.hp1
HG02040.hp1
HG02055.hp1
HG02056.hp1
HG02071.hp1
HG02074.hp1
HG02083.hp1
HG02129.hp1
HG02132.hp1
HG02135.hp1
HG02145.hp1
HG02258.hp1
HG02280.hp1
HG02280.hp2
HG02300.hp1
HG02486.hp1
HG02572.hp1
HG02602.hp1
HG02615.hp1
HG02615.hp2
HG02647.hp1
HG02698.hp1
HG02717.hp1
HG02735.hp1
HG02738.hp1
HG02809.hp1
HG02809.hp2
HG02886.hp1
HG02886.hp2
HG02895.hp1
HG02922.hp1
HG02922.hp2
HG02965.hp1
HG02976.hp1
HG02976.hp2
HG03017.hp1
HG03041.hp1
HG03041.hp2
HG03098.hp1
HG03130.hp1
HG03139.hp1
HG03209.hp1
HG03225.hp1
HG03471.hp1
HG03486.hp1
HG03486.hp2
HG03490.hp1
HG03491.hp1
HG03491.hp2
HG03492.hp1
HG03516.hp1
HG03516.hp2
HG03579.hp1
HG03654.hp1
HG03688.hp1
HG03710.hp1
HG03942.hp1
HG04115.hp1
HG04199.hp1
HG04204.hp1
HG04228.hp1
NA18522.hp1
NA18612.hp1
NA18747.hp1
NA18943.hp1
NA18944.hp1
NA18945.hp1
NA18948.hp1
NA18952.hp1
NA18953.hp1
NA18955.hp1
NA18959.hp1
NA18960.hp1
NA18961.hp1
NA18962.hp1
NA18965.hp1
NA18966.hp1
NA18967.hp1
NA18970.hp1
NA18971.hp1
NA18974.hp1
NA18977.hp1
NA18982.hp1
NA18983.hp1
NA18984.hp1
NA18986.hp1
NA18988.hp1
NA18989.hp1
NA18990.hp1
NA18994.hp1
NA18995.hp1
NA19000.hp1
NA19004.hp1
NA19005.hp1
NA19006.hp1
NA19007.hp1
NA19009.hp1
NA19012.hp1
NA19043.hp1
NA19055.hp1
NA19056.hp1
NA19058.hp1
NA19060.hp1
NA19062.hp1
NA19063.hp1
NA19066.hp1
NA19068.hp1
NA19070.hp1
NA19072.hp1
NA19076.hp1
NA19079.hp1
NA19082.hp1
NA19085.hp1
NA19086.hp1
NA19088.hp1
NA19089.hp1
NA19091.hp1
NA19240.hp1
NA19240.hp2
NA20300.hp1
NA20300.hp2
NA20752.hp1
NA20805.hp1
NA20905.hp1
homoSapiens_chm13v2.hp1
 intron_variant MODIFIER c.2692+5475A>G
c.2692+5475A>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 20/21 chrX 21615092
chrX:21615253 T
T
 A
A
 1 a0001c0001t0002g0019
a0001c0001t0002g0019
 1 HG01106.hp1
HG01106.hp1
 intron_variant MODIFIER c.2692+5636T>A
c.2692+5636T>A
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 20/21 chrX 21615253
chrX:21615346 TG
TG
 T
T
 1 a0001c0001t0039g0144
a0001c0001t0039g0144
 1 NA19055.hp1
NA19055.hp1
 intron_variant MODIFIER c.2692+5731delG
c.2692+5731delG
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 20/21 INFO_REALIGN_3_PRIME chrX 21615346
chrX:21615521 T
T
 C
C
 1 a0001c0001t0002g0028
a0001c0001t0002g0028
 1 HG02258.hp1
HG02258.hp1
 intron_variant MODIFIER c.2692+5904T>C
c.2692+5904T>C
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 20/21 chrX 21615521
chrX:21615561 A
A
 G
G
 4 a0001c0001t0011g0016
a0001c0001t0011g0017
a0001c0001t0011g0138
others(1): Show 
a0001c0001t0011g0016
a0001c0001t0011g0017
a0001c0001t0011g0138
a0001c0001t0012g0025
 4 HG03041.hp1
HG03486.hp2
HG03579.hp1
others(1): Show 
HG03041.hp1
HG03486.hp2
HG03579.hp1
NA18522.hp1
 intron_variant MODIFIER c.2692+5944A>G
c.2692+5944A>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 20/21 chrX 21615561
chrX:21615575 G
G
 GA
GA
 1 a0001c0001t0039g0144
a0001c0001t0039g0144
 1 NA19055.hp1
NA19055.hp1
 intron_variant MODIFIER c.2692+5961dupA
c.2692+5961dupA
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 20/21 INFO_REALIGN_3_PRIME chrX 21615575
chrX:21615736 A
A
 G
G
 1 a0001c0001t0003g0044
a0001c0001t0003g0044
 1 HG03942.hp1
HG03942.hp1
 intron_variant MODIFIER c.2692+6119A>G
c.2692+6119A>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 20/21 chrX 21615736
chrX:21616003 AC
AC
 A
A
 1 a0001c0001t0039g0144
a0001c0001t0039g0144
 1 NA19055.hp1
NA19055.hp1
 intron_variant MODIFIER c.2692+6388delC
c.2692+6388delC
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 20/21 INFO_REALIGN_3_PRIME chrX 21616003
chrX:21616058 T
T
 C
C
 1 a0001c0001t0007g0140
a0001c0001t0007g0140
 1 HG02922.hp1
HG02922.hp1
 intron_variant MODIFIER c.2692+6441T>C
c.2692+6441T>C
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 20/21 chrX 21616058
chrX:21616189 TC
TC
 T
T
 1 a0001c0001t0039g0144
a0001c0001t0039g0144
 1 NA19055.hp1
NA19055.hp1
 intron_variant MODIFIER c.2692+6575delC
c.2692+6575delC
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 20/21 INFO_REALIGN_3_PRIME chrX 21616189
chrX:21616359 G
G
 A
A
 1 a0001c0001t0002g0047
a0001c0001t0002g0047
 1 NA19076.hp1
NA19076.hp1
 intron_variant MODIFIER c.2692+6742G>A
c.2692+6742G>A
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 20/21 chrX 21616359
chrX:21616762 TC
TC
 T
T
 1 a0001c0001t0039g0144
a0001c0001t0039g0144
 1 NA19055.hp1
NA19055.hp1
 intron_variant MODIFIER c.2692+7148delC
c.2692+7148delC
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 20/21 INFO_REALIGN_3_PRIME chrX 21616762
chrX:21616856 CTTAA
CTTAA
 C
C
 2 a0001c0001t0002g0004
a0001c0001t0008g0005
a0001c0001t0002g0004
a0001c0001t0008g0005
 2 HG01069.hp1
HG01071.hp1
HG01069.hp1
HG01071.hp1
 intron_variant MODIFIER c.2692+7243_2692+724
others(8): Show 
c.2692+7243_2692+7246delATTA
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 20/21 INFO_REALIGN_3_PRIME chrX 21616856
chrX:21616926 GC
GC
 G
G
 1 a0001c0001t0039g0144
a0001c0001t0039g0144
 1 NA19055.hp1
NA19055.hp1
 intron_variant MODIFIER c.2692+7311delC
c.2692+7311delC
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 20/21 INFO_REALIGN_3_PRIME chrX 21616926
chrX:21617099 TTTATG
TTTATG
 T
T
 1 a0001c0001t0002g0019
a0001c0001t0002g0019
 1 HG01106.hp1
HG01106.hp1
 intron_variant MODIFIER c.2692+7492_2692+749
others(9): Show 
c.2692+7492_2692+7496delGTTAT
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 20/21 INFO_REALIGN_3_PRIME chrX 21617099
chrX:21617382 C
C
 T
T
 1 a0001c0007t0036g0026
a0001c0007t0036g0026
 1 HG01081.hp1
HG01081.hp1
 intron_variant MODIFIER c.2692+7765C>T
c.2692+7765C>T
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 20/21 chrX 21617382
chrX:21617527 A
A
 AG
AG
 1 a0001c0001t0039g0144
a0001c0001t0039g0144
 1 NA19055.hp1
NA19055.hp1
 intron_variant MODIFIER c.2692+7911dupG
c.2692+7911dupG
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 20/21 INFO_REALIGN_3_PRIME chrX 21617527
chrX:21617695 T
T
 G
G
 5 a0001c0001t0007g0140
a0001c0001t0010g0152
a0001c0001t0010g0153
others(2): Show 
a0001c0001t0007g0140
a0001c0001t0010g0152
a0001c0001t0010g0153
a0001c0001t0010g0162
a0001c0001t0017g0018
 5 HG01071.hp2
HG02922.hp1
HG03209.hp1
others(2): Show 
HG01071.hp2
HG02922.hp1
HG03209.hp1
HG03225.hp1
NA19240.hp2
 intron_variant MODIFIER c.2692+8078T>G
c.2692+8078T>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 20/21 chrX 21617695
chrX:21617757 G
G
 A
A
 1 a0001c0007t0036g0026
a0001c0007t0036g0026
 1 HG01081.hp1
HG01081.hp1
 intron_variant MODIFIER c.2692+8140G>A
c.2692+8140G>A
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 20/21 chrX 21617757
chrX:21617824 CA
CA
 C
C
 1 a0001c0001t0039g0144
a0001c0001t0039g0144
 1 NA19055.hp1
NA19055.hp1
 intron_variant MODIFIER c.2692+8212delA
c.2692+8212delA
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 20/21 INFO_REALIGN_3_PRIME chrX 21617824
chrX:21617911 A
A
 AC
AC
 4 a0001c0001t0010g0152
a0001c0001t0010g0153
a0001c0001t0010g0162
others(1): Show 
a0001c0001t0010g0152
a0001c0001t0010g0153
a0001c0001t0010g0162
a0001c0001t0019g0014
 4 HG01884.hp2
HG03209.hp1
HG03225.hp1
others(1): Show 
HG01884.hp2
HG03209.hp1
HG03225.hp1
NA19240.hp2
 intron_variant MODIFIER c.2692+8301dupC
c.2692+8301dupC
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 20/21 INFO_REALIGN_3_PRIME chrX 21617911
chrX:21617911 AC
AC
 A
A
 1 a0001c0001t0039g0144
a0001c0001t0039g0144
 1 NA19055.hp1
NA19055.hp1
 intron_variant MODIFIER c.2692+8301delC
c.2692+8301delC
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 20/21 INFO_REALIGN_3_PRIME chrX 21617911
chrX:21617932 G
G
 A
A
 2 a0001c0001t0022g0033
a0001c0001t0027g0034
a0001c0001t0022g0033
a0001c0001t0027g0034
 2 HG02055.hp1
HG02486.hp1
HG02055.hp1
HG02486.hp1
 intron_variant MODIFIER c.2692+8315G>A
c.2692+8315G>A
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 20/21 chrX 21617932
chrX:21617973 CT
CT
 C
C
 1 a0001c0001t0039g0144
a0001c0001t0039g0144
 1 NA19055.hp1
NA19055.hp1
 intron_variant MODIFIER c.2692+8358delT
c.2692+8358delT
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 20/21 INFO_REALIGN_3_PRIME chrX 21617973
chrX:21618109 G
G
 C
C
 5 a0001c0001t0007g0140
a0001c0001t0010g0152
a0001c0001t0010g0153
others(2): Show 
a0001c0001t0007g0140
a0001c0001t0010g0152
a0001c0001t0010g0153
a0001c0001t0010g0162
a0001c0001t0019g0014
 5 HG01884.hp2
HG02922.hp1
HG03209.hp1
others(2): Show 
HG01884.hp2
HG02922.hp1
HG03209.hp1
HG03225.hp1
NA19240.hp2
 intron_variant MODIFIER c.2692+8492G>C
c.2692+8492G>C
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 20/21 chrX 21618109
chrX:21618213 A
A
 T
T
 3 a0001c0001t0009g0011
a0001c0001t0009g0012
a0001c0001t0009g0013
a0001c0001t0009g0011
a0001c0001t0009g0012
a0001c0001t0009g0013
 3 HG02572.hp1
HG02809.hp1
HG03486.hp1
HG02572.hp1
HG02809.hp1
HG03486.hp1
 intron_variant MODIFIER c.2692+8596A>T
c.2692+8596A>T
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 20/21 chrX 21618213
chrX:21618364 A
A
 G
G
 9 a0001c0001t0007g0140
a0001c0001t0010g0152
a0001c0001t0010g0153
others(6): Show 
a0001c0001t0007g0140
a0001c0001t0010g0152
a0001c0001t0010g0153
a0001c0001t0010g0162
a0001c0001t0019g0014
a0001c0001t0020g0141
a0001c0001t0042g0008
a0001c0003t0014g0147
a0001c0003t0014g0149
 9 HG01243.hp1
HG01884.hp2
HG02615.hp1
others(6): Show 
HG01243.hp1
HG01884.hp2
HG02615.hp1
HG02647.hp1
HG02922.hp1
HG03209.hp1
HG03225.hp1
HG03471.hp1
NA19240.hp2
 intron_variant MODIFIER c.2692+8747A>G
c.2692+8747A>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 20/21 chrX 21618364
chrX:21618366 TC
TC
 T
T
 1 a0001c0001t0039g0144
a0001c0001t0039g0144
 1 NA19055.hp1
NA19055.hp1
 intron_variant MODIFIER c.2692+8752delC
c.2692+8752delC
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 20/21 INFO_REALIGN_3_PRIME chrX 21618366
chrX:21618827 A
A
 AG
AG
 1 a0001c0001t0039g0144
a0001c0001t0039g0144
 1 NA19055.hp1
NA19055.hp1
 intron_variant MODIFIER c.2692+9213dupG
c.2692+9213dupG
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 20/21 INFO_REALIGN_3_PRIME chrX 21618827
chrX:21619051 A
A
 AT
AT
 1 a0001c0001t0039g0144
a0001c0001t0039g0144
 1 NA19055.hp1
NA19055.hp1
 intron_variant MODIFIER c.2692+9439dupT
c.2692+9439dupT
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 20/21 INFO_REALIGN_3_PRIME chrX 21619051
chrX:21619057 A
A
 G
G
 2 a0001c0001t0006g0155
a0003c0004t0006g0154
a0001c0001t0006g0155
a0003c0004t0006g0154
 2 HG01884.hp1
HG02922.hp2
HG01884.hp1
HG02922.hp2
 intron_variant MODIFIER c.2692+9440A>G
c.2692+9440A>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 20/21 chrX 21619057
chrX:21619690 C
C
 T
T
 66 a0001c0001t0001g0077
a0001c0001t0002g0003
a0001c0001t0002g0004
others(63): Show 
a0001c0001t0001g0077
a0001c0001t0002g0003
a0001c0001t0002g0004
a0001c0001t0002g0019
a0001c0001t0002g0028
a0001c0001t0002g0046
a0001c0001t0002g0047
a0001c0001t0002g0049
a0001c0001t0002g0050
a0001c0001t0002g0110
a0001c0001t0002g0112
a0001c0001t0002g0118
a0001c0001t0002g0119
a0001c0001t0002g0120
a0001c0001t0002g0121
a0001c0001t0002g0122
a0001c0001t0002g0125
a0001c0001t0002g0126
a0001c0001t0003g0015
a0001c0001t0003g0024
a0001c0001t0003g0029
a0001c0001t0003g0031
a0001c0001t0003g0151
a0001c0001t0004g0056
a0001c0001t0006g0155
a0001c0001t0006g0157
a0001c0001t0006g0159
a0001c0001t0006g0160
a0001c0001t0006g0161
a0001c0001t0007g0140
a0001c0001t0008g0005
a0001c0001t0008g0124
a0001c0001t0008g0135
a0001c0001t0008g0143
a0001c0001t0009g0010
a0001c0001t0009g0011
a0001c0001t0009g0012
a0001c0001t0009g0013
a0001c0001t0010g0152
a0001c0001t0010g0153
a0001c0001t0010g0162
a0001c0001t0011g0016
a0001c0001t0011g0017
a0001c0001t0011g0138
a0001c0001t0012g0025
a0001c0001t0012g0045
a0001c0001t0012g0142
a0001c0001t0013g0066
a0001c0001t0017g0146
a0001c0001t0019g0014
a0001c0001t0020g0141
a0001c0001t0022g0033
a0001c0001t0024g0156
a0001c0001t0027g0034
a0001c0001t0038g0150
a0001c0001t0039g0144
a0001c0001t0040g0027
a0001c0001t0041g0009
a0001c0001t0042g0008
a0001c0001t0043g0007
a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0006t0028g0059
a0001c0007t0036g0026
a0002c0005t0003g0030
a0003c0004t0006g0154
 66 HG00621.hp1
HG00735.hp2
HG00741.hp1
others(63): Show 
HG00621.hp1
HG00735.hp2
HG00741.hp1
HG01069.hp1
HG01071.hp1
HG01081.hp1
HG01081.hp2
HG01106.hp1
HG01109.hp1
HG01167.hp1
HG01243.hp1
HG01433.hp1
HG01884.hp1
HG01884.hp2
HG02055.hp1
HG02074.hp1
HG02083.hp1
HG02145.hp1
HG02258.hp1
HG02280.hp1
HG02280.hp2
HG02486.hp1
HG02572.hp1
HG02615.hp1
HG02615.hp2
HG02647.hp1
HG02717.hp1
HG02809.hp1
HG02886.hp1
HG02886.hp2
HG02895.hp1
HG02922.hp1
HG02922.hp2
HG02976.hp1
HG02976.hp2
HG03041.hp1
HG03098.hp1
HG03130.hp1
HG03139.hp1
HG03209.hp1
HG03225.hp1
HG03471.hp1
HG03486.hp1
HG03486.hp2
HG03491.hp2
HG03516.hp2
HG03579.hp1
NA18522.hp1
NA18612.hp1
NA18943.hp1
NA18944.hp1
NA18966.hp1
NA18986.hp1
NA18990.hp1
NA19000.hp1
NA19004.hp1
NA19012.hp1
NA19043.hp1
NA19055.hp1
NA19070.hp1
NA19076.hp1
NA19086.hp1
NA19091.hp1
NA19240.hp1
NA19240.hp2
NA20300.hp2
 intron_variant MODIFIER c.2692+10073C>T
c.2692+10073C>T
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 20/21 chrX 21619690
chrX:21619837 T
T
 A
A
 1 a0001c0001t0012g0142
a0001c0001t0012g0142
 1 HG03139.hp1
HG03139.hp1
 intron_variant MODIFIER c.2692+10220T>A
c.2692+10220T>A
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 20/21 chrX 21619837
chrX:21620003 T
T
 TG
TG
 1 a0001c0001t0039g0144
a0001c0001t0039g0144
 1 NA19055.hp1
NA19055.hp1
 intron_variant MODIFIER c.2692+10389dupG
c.2692+10389dupG
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 20/21 INFO_REALIGN_3_PRIME chrX 21620003
chrX:21620016 CTTTA
CTTTA
 C
C
 1 a0001c0001t0001g0083
a0001c0001t0001g0083
 1 NA20300.hp1
NA20300.hp1
 intron_variant MODIFIER c.2692+10404_2692+10
others(10): Show 
c.2692+10404_2692+10407delTTTA
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 20/21 INFO_REALIGN_3_PRIME chrX 21620016
chrX:21620256 A
A
 G
G
 4 a0001c0001t0007g0140
a0001c0001t0010g0152
a0001c0001t0010g0153
others(1): Show 
a0001c0001t0007g0140
a0001c0001t0010g0152
a0001c0001t0010g0153
a0001c0001t0010g0162
 4 HG02922.hp1
HG03209.hp1
HG03225.hp1
others(1): Show 
HG02922.hp1
HG03209.hp1
HG03225.hp1
NA19240.hp2
 intron_variant MODIFIER c.2692+10639A>G
c.2692+10639A>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 20/21 chrX 21620256
chrX:21620450 G
G
 GC
GC
 1 a0001c0001t0039g0144
a0001c0001t0039g0144
 1 NA19055.hp1
NA19055.hp1
 intron_variant MODIFIER c.2692+10836dupC
c.2692+10836dupC
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 20/21 INFO_REALIGN_3_PRIME chrX 21620450
chrX:21620660 CA
CA
 C
C
 1 a0001c0001t0039g0144
a0001c0001t0039g0144
 1 NA19055.hp1
NA19055.hp1
 intron_variant MODIFIER c.2692+11046delA
c.2692+11046delA
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 20/21 INFO_REALIGN_3_PRIME chrX 21620660
chrX:21620820 G
G
 GA
GA
 3 a0001c0001t0010g0152
a0001c0001t0010g0153
a0001c0001t0010g0162
a0001c0001t0010g0152
a0001c0001t0010g0153
a0001c0001t0010g0162
 3 HG03209.hp1
HG03225.hp1
NA19240.hp2
HG03209.hp1
HG03225.hp1
NA19240.hp2
 intron_variant MODIFIER c.2692+11211dupA
c.2692+11211dupA
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 20/21 INFO_REALIGN_3_PRIME chrX 21620820
chrX:21620871 C
C
 A
A
 1 a0001c0001t0003g0031
a0001c0001t0003g0031
 1 HG02976.hp2
HG02976.hp2
 intron_variant MODIFIER c.2692+11254C>A
c.2692+11254C>A
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 20/21 chrX 21620871
chrX:21620926 TC
TC
 T
T
 1 a0001c0001t0039g0144
a0001c0001t0039g0144
 1 NA19055.hp1
NA19055.hp1
 intron_variant MODIFIER c.2692+11312delC
c.2692+11312delC
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 20/21 INFO_REALIGN_3_PRIME chrX 21620926
chrX:21621018 C
C
 T
T
 1 a0001c0001t0004g0020
a0001c0001t0004g0020
 1 HG01192.hp1
HG01192.hp1
 intron_variant MODIFIER c.2692+11401C>T
c.2692+11401C>T
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 20/21 chrX 21621018
chrX:21621169 A
A
 AC
AC
 1 a0001c0001t0039g0144
a0001c0001t0039g0144
 1 NA19055.hp1
NA19055.hp1
 intron_variant MODIFIER c.2692+11553dupC
c.2692+11553dupC
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 20/21 INFO_REALIGN_3_PRIME chrX 21621169
chrX:21621289 T
T
 C
C
 1 a0001c0001t0001g0052
a0001c0001t0001g0052
 1 NA19007.hp1
NA19007.hp1
 intron_variant MODIFIER c.2692+11672T>C
c.2692+11672T>C
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 20/21 chrX 21621289
chrX:21621493 C
C
 T
T
 17 a0001c0001t0006g0155
a0001c0001t0006g0157
a0001c0001t0006g0159
others(14): Show 
a0001c0001t0006g0155
a0001c0001t0006g0157
a0001c0001t0006g0159
a0001c0001t0006g0160
a0001c0001t0006g0161
a0001c0001t0009g0010
a0001c0001t0009g0011
a0001c0001t0009g0012
a0001c0001t0009g0013
a0001c0001t0011g0016
a0001c0001t0011g0017
a0001c0001t0011g0138
a0001c0001t0041g0009
a0001c0001t0042g0008
a0001c0001t0043g0007
a0001c0006t0028g0059
a0003c0004t0006g0154
 17 HG01884.hp1
HG02280.hp2
HG02572.hp1
others(14): Show 
HG01884.hp1
HG02280.hp2
HG02572.hp1
HG02615.hp2
HG02647.hp1
HG02809.hp1
HG02886.hp1
HG02922.hp2
HG02976.hp1
HG03041.hp1
HG03098.hp1
HG03130.hp1
HG03486.hp1
HG03491.hp2
HG03516.hp2
HG03579.hp1
NA18522.hp1
 intron_variant MODIFIER c.2692+11876C>T
c.2692+11876C>T
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 20/21 chrX 21621493
chrX:21621508 G
G
 A
A
 6 a0001c0001t0007g0140
a0001c0001t0010g0152
a0001c0001t0010g0153
others(3): Show 
a0001c0001t0007g0140
a0001c0001t0010g0152
a0001c0001t0010g0153
a0001c0001t0010g0162
a0001c0003t0014g0147
a0001c0003t0014g0149
 6 HG02615.hp1
HG02922.hp1
HG03209.hp1
others(3): Show 
HG02615.hp1
HG02922.hp1
HG03209.hp1
HG03225.hp1
HG03471.hp1
NA19240.hp2
 intron_variant MODIFIER c.2692+11891G>A
c.2692+11891G>A
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 20/21 chrX 21621508
chrX:21622392 T
T
 C
C
 30 a0001c0001t0006g0155
a0001c0001t0006g0157
a0001c0001t0006g0159
others(27): Show 
a0001c0001t0006g0155
a0001c0001t0006g0157
a0001c0001t0006g0159
a0001c0001t0006g0160
a0001c0001t0006g0161
a0001c0001t0007g0140
a0001c0001t0009g0010
a0001c0001t0009g0011
a0001c0001t0009g0012
a0001c0001t0009g0013
a0001c0001t0010g0152
a0001c0001t0010g0153
a0001c0001t0010g0162
a0001c0001t0011g0016
a0001c0001t0011g0017
a0001c0001t0011g0138
a0001c0001t0012g0025
a0001c0001t0019g0014
a0001c0001t0020g0141
a0001c0001t0022g0033
a0001c0001t0023g0006
a0001c0001t0027g0034
a0001c0001t0041g0009
a0001c0001t0042g0008
a0001c0001t0043g0007
a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0006t0028g0059
a0001c0007t0036g0026
a0003c0004t0006g0154
 30 HG01081.hp1
HG01243.hp1
HG01884.hp1
others(27): Show 
HG01081.hp1
HG01243.hp1
HG01884.hp1
HG01884.hp2
HG02055.hp1
HG02280.hp2
HG02486.hp1
HG02572.hp1
HG02615.hp1
HG02615.hp2
HG02647.hp1
HG02809.hp1
HG02886.hp1
HG02922.hp1
HG02922.hp2
HG02976.hp1
HG03041.hp1
HG03098.hp1
HG03130.hp1
HG03209.hp1
HG03225.hp1
HG03471.hp1
HG03486.hp1
HG03486.hp2
HG03491.hp2
HG03516.hp2
HG03579.hp1
HG03654.hp1
NA18522.hp1
NA19240.hp2
 intron_variant MODIFIER c.2692+12775T>C
c.2692+12775T>C
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 20/21 chrX 21622392
chrX:21622593 G
G
 GA
GA
 1 a0001c0001t0039g0144
a0001c0001t0039g0144
 1 NA19055.hp1
NA19055.hp1
 intron_variant MODIFIER c.2692+12982dupA
c.2692+12982dupA
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 20/21 INFO_REALIGN_3_PRIME chrX 21622593
chrX:21622853 A
A
 AT
AT
 1 a0001c0001t0039g0144
a0001c0001t0039g0144
 1 NA19055.hp1
NA19055.hp1
 intron_variant MODIFIER c.2692+13242dupT
c.2692+13242dupT
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 20/21 INFO_REALIGN_3_PRIME chrX 21622853
chrX:21622949 A
A
 AG
AG
 1 a0001c0001t0039g0144
a0001c0001t0039g0144
 1 NA19055.hp1
NA19055.hp1
 intron_variant MODIFIER c.2692+13334dupG
c.2692+13334dupG
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 20/21 INFO_REALIGN_3_PRIME chrX 21622949
chrX:21623292 T
T
 C
C
 1 a0001c0001t0002g0019
a0001c0001t0002g0019
 1 HG01106.hp1
HG01106.hp1
 intron_variant MODIFIER c.2692+13675T>C
c.2692+13675T>C
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 20/21 chrX 21623292
chrX:21623467 AT
AT
 A
A
 1 a0001c0001t0039g0144
a0001c0001t0039g0144
 1 NA19055.hp1
NA19055.hp1
 intron_variant MODIFIER c.2692+13852delT
c.2692+13852delT
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 20/21 INFO_REALIGN_3_PRIME chrX 21623467
chrX:21623542 T
T
 C
C
 10 a0001c0001t0007g0140
a0001c0001t0010g0152
a0001c0001t0010g0153
others(7): Show 
a0001c0001t0007g0140
a0001c0001t0010g0152
a0001c0001t0010g0153
a0001c0001t0010g0162
a0001c0001t0017g0018
a0001c0001t0019g0014
a0001c0001t0020g0141
a0001c0001t0042g0008
a0001c0003t0014g0147
a0001c0003t0014g0149
 10 HG01071.hp2
HG01243.hp1
HG01884.hp2
others(7): Show 
HG01071.hp2
HG01243.hp1
HG01884.hp2
HG02615.hp1
HG02647.hp1
HG02922.hp1
HG03209.hp1
HG03225.hp1
HG03471.hp1
NA19240.hp2
 intron_variant MODIFIER c.2692+13925T>C
c.2692+13925T>C
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 20/21 chrX 21623542
chrX:21624442 G
G
 GA
GA
 1 a0001c0001t0039g0144
a0001c0001t0039g0144
 1 NA19055.hp1
NA19055.hp1
 intron_variant MODIFIER c.2692+14827dupA
c.2692+14827dupA
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 20/21 INFO_REALIGN_3_PRIME chrX 21624442
chrX:21624482 A
A
 T
T
 1 a0001c0001t0027g0034
a0001c0001t0027g0034
 1 HG02486.hp1
HG02486.hp1
 intron_variant MODIFIER c.2692+14865A>T
c.2692+14865A>T
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 20/21 chrX 21624482
chrX:21624509 T
T
 TTTG
TTTG
 1 a0001c0001t0039g0144
a0001c0001t0039g0144
 1 NA19055.hp1
NA19055.hp1
 intron_variant MODIFIER c.2692+14892_2692+14
others(9): Show 
c.2692+14892_2692+14893insTTG
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 20/21 chrX 21624509
chrX:21624510 G
G
 T
T
 1 a0001c0001t0039g0144
a0001c0001t0039g0144
 1 NA19055.hp1
NA19055.hp1
 intron_variant MODIFIER c.2692+14893G>T
c.2692+14893G>T
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 20/21 chrX 21624510
chrX:21624518 G
G
 GT
GT
 3 a0001c0001t0001g0036
a0001c0001t0032g0163
a0001c0001t0042g0008
a0001c0001t0001g0036
a0001c0001t0032g0163
a0001c0001t0042g0008
 3 HG02647.hp1
HG04115.hp1
NA19063.hp1
HG02647.hp1
HG04115.hp1
NA19063.hp1
 intron_variant MODIFIER c.2692+14910dupT
c.2692+14910dupT
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 20/21 INFO_REALIGN_3_PRIME chrX 21624518
chrX:21624565 G
G
 A
A
 1 a0001c0001t0001g0087
a0001c0001t0001g0087
 1 NA20905.hp1
NA20905.hp1
 intron_variant MODIFIER c.2692+14948G>A
c.2692+14948G>A
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 20/21 chrX 21624565
chrX:21624906 G
G
 T
T
 1 a0001c0001t0002g0028
a0001c0001t0002g0028
 1 HG02258.hp1
HG02258.hp1
 intron_variant MODIFIER c.2692+15289G>T
c.2692+15289G>T
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 20/21 chrX 21624906
chrX:21625340 G
G
 A
A
 1 a0001c0001t0001g0053
a0001c0001t0001g0053
 1 HG00280.hp1
HG00280.hp1
 intron_variant MODIFIER c.2692+15723G>A
c.2692+15723G>A
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 20/21 chrX 21625340
chrX:21625678 C
C
 T
T
 1 a0001c0001t0018g0123
a0001c0001t0018g0123
 1 HG01358.hp1
HG01358.hp1
 intron_variant MODIFIER c.2692+16061C>T
c.2692+16061C>T
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 20/21 chrX 21625678
chrX:21625996 CA
CA
 C
C
 1 a0001c0001t0006g0155
a0001c0001t0006g0155
 1 HG02922.hp2
HG02922.hp2
 intron_variant MODIFIER c.2692+16382delA
c.2692+16382delA
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 20/21 INFO_REALIGN_3_PRIME chrX 21625996
chrX:21626153 T
T
 G
G
 1 a0001c0001t0001g0137
a0001c0001t0001g0137
 1 HG03490.hp1
HG03490.hp1
 intron_variant MODIFIER c.2692+16536T>G
c.2692+16536T>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 20/21 chrX 21626153
chrX:21626172 G
G
 A
A
 2 a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0014g0147
a0001c0003t0014g0149
 2 HG02615.hp1
HG03471.hp1
HG02615.hp1
HG03471.hp1
 intron_variant MODIFIER c.2692+16555G>A
c.2692+16555G>A
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 20/21 chrX 21626172
chrX:21626244 T
T
 TA
TA
 19 a0001c0001t0001g0035
a0001c0001t0001g0082
a0001c0001t0002g0004
others(16): Show 
a0001c0001t0001g0035
a0001c0001t0001g0082
a0001c0001t0002g0004
a0001c0001t0002g0019
a0001c0001t0002g0115
a0001c0001t0002g0121
a0001c0001t0003g0101
a0001c0001t0004g0056
a0001c0001t0005g0079
a0001c0001t0005g0095
a0001c0001t0005g0099
a0001c0001t0008g0005
a0001c0001t0015g0098
a0001c0001t0016g0085
a0001c0001t0017g0146
a0001c0001t0020g0141
a0001c0001t0029g0023
a0001c0001t0030g0086
a0001c0001t0033g0002
 19 HG00741.hp1
HG01069.hp1
HG01071.hp1
others(16): Show 
HG00741.hp1
HG01069.hp1
HG01071.hp1
HG01099.hp1
HG01106.hp1
HG01109.hp1
HG01243.hp1
HG01928.hp1
HG01952.hp1
HG02056.hp1
HG02300.hp1
HG04199.hp1
NA18612.hp1
NA18747.hp1
NA18960.hp1
NA18961.hp1
NA18974.hp1
NA18995.hp1
NA19006.hp1
 intron_variant MODIFIER c.2692+16650dupA
c.2692+16650dupA
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 20/21 INFO_REALIGN_3_PRIME chrX 21626244
chrX:21626244 T
T
 TAA
TAA
 7 a0001c0001t0002g0028
a0001c0001t0003g0015
a0001c0001t0012g0025
others(4): Show 
a0001c0001t0002g0028
a0001c0001t0003g0015
a0001c0001t0012g0025
a0001c0001t0012g0045
a0001c0001t0022g0033
a0001c0001t0038g0150
a0001c0001t0040g0027
 7 HG02055.hp1
HG02145.hp1
HG02258.hp1
others(4): Show 
HG02055.hp1
HG02145.hp1
HG02258.hp1
HG02717.hp1
HG03486.hp2
NA19043.hp1
NA19240.hp1
 intron_variant MODIFIER c.2692+16649_2692+16
others(8): Show 
c.2692+16649_2692+16650dupAA
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 20/21 INFO_REALIGN_3_PRIME chrX 21626244
chrX:21626244 T
T
 TAAA
TAAA
 3 a0001c0001t0003g0024
a0001c0001t0003g0029
a0001c0001t0003g0151
a0001c0001t0003g0024
a0001c0001t0003g0029
a0001c0001t0003g0151
 3 HG01081.hp2
HG02280.hp1
HG02895.hp1
HG01081.hp2
HG02280.hp1
HG02895.hp1
 intron_variant MODIFIER c.2692+16648_2692+16
others(9): Show 
c.2692+16648_2692+16650dupAAA
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 20/21 INFO_REALIGN_3_PRIME chrX 21626244
chrX:21626244 TA
TA
 T
T
 19 a0001c0001t0001g0037
a0001c0001t0001g0093
a0001c0001t0003g0044
others(16): Show 
a0001c0001t0001g0037
a0001c0001t0001g0093
a0001c0001t0003g0044
a0001c0001t0004g0064
a0001c0001t0006g0155
a0001c0001t0006g0159
a0001c0001t0006g0160
a0001c0001t0006g0161
a0001c0001t0010g0152
a0001c0001t0010g0162
a0001c0001t0011g0016
a0001c0001t0011g0017
a0001c0001t0011g0138
a0001c0001t0019g0014
a0001c0001t0041g0009
a0001c0001t0042g0008
a0001c0001t0043g0007
a0001c0003t0014g0147
a0001c0003t0014g0149
 19 HG00738.hp1
HG01884.hp2
HG02135.hp1
others(16): Show 
HG00738.hp1
HG01884.hp2
HG02135.hp1
HG02615.hp1
HG02615.hp2
HG02647.hp1
HG02886.hp1
HG02922.hp2
HG02976.hp1
HG03041.hp1
HG03098.hp1
HG03209.hp1
HG03225.hp1
HG03471.hp1
HG03491.hp2
HG03579.hp1
HG03942.hp1
NA18522.hp1
NA20805.hp1
 intron_variant MODIFIER c.2692+16650delA
c.2692+16650delA
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 20/21 INFO_REALIGN_3_PRIME chrX 21626244
chrX:21626244 TAA
TAA
 T
T
 4 a0001c0001t0009g0010
a0001c0001t0009g0012
a0001c0001t0009g0013
others(1): Show 
a0001c0001t0009g0010
a0001c0001t0009g0012
a0001c0001t0009g0013
a0003c0004t0006g0154
 4 HG01884.hp1
HG02280.hp2
HG02572.hp1
others(1): Show 
HG01884.hp1
HG02280.hp2
HG02572.hp1
HG03486.hp1
 intron_variant MODIFIER c.2692+16649_2692+16
others(8): Show 
c.2692+16649_2692+16650delAA
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 20/21 INFO_REALIGN_3_PRIME chrX 21626244
chrX:21626244 TAAA
TAAA
 T
T
 1 a0001c0001t0009g0011
a0001c0001t0009g0011
 1 HG02809.hp1
HG02809.hp1
 intron_variant MODIFIER c.2692+16648_2692+16
others(9): Show 
c.2692+16648_2692+16650delAAA
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 20/21 INFO_REALIGN_3_PRIME chrX 21626244
chrX:21626267 AT
AT
 A
A
 1 a0001c0001t0007g0140
a0001c0001t0007g0140
 1 HG02922.hp1
HG02922.hp1
 intron_variant MODIFIER c.2692+16651delT
c.2692+16651delT
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 20/21 chrX 21626267
chrX:21626268 T
T
 A
A
 1 a0001c0001t0003g0015
a0001c0001t0003g0015
 1 HG02717.hp1
HG02717.hp1
 intron_variant MODIFIER c.2692+16651T>A
c.2692+16651T>A
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 20/21 chrX 21626268
chrX:21626735 A
A
 G
G
 9 a0001c0001t0006g0155
a0001c0001t0006g0157
a0001c0001t0006g0159
others(6): Show 
a0001c0001t0006g0155
a0001c0001t0006g0157
a0001c0001t0006g0159
a0001c0001t0006g0160
a0001c0001t0006g0161
a0001c0001t0017g0018
a0001c0001t0043g0007
a0001c0006t0028g0059
a0003c0004t0006g0154
 9 HG01071.hp2
HG01884.hp1
HG02615.hp2
others(6): Show 
HG01071.hp2
HG01884.hp1
HG02615.hp2
HG02886.hp1
HG02922.hp2
HG02976.hp1
HG03130.hp1
HG03491.hp2
HG03516.hp2
 intron_variant MODIFIER c.2692+17118A>G
c.2692+17118A>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 20/21 chrX 21626735
chrX:21626958 G
G
 C
C
 1 a0001c0001t0018g0123
a0001c0001t0018g0123
 1 HG01358.hp1
HG01358.hp1
 intron_variant MODIFIER c.2692+17341G>C
c.2692+17341G>C
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 20/21 chrX 21626958
chrX:21627220 C
C
 T
T
 11 a0001c0001t0002g0028
a0001c0001t0003g0015
a0001c0001t0003g0024
others(8): Show 
a0001c0001t0002g0028
a0001c0001t0003g0015
a0001c0001t0003g0024
a0001c0001t0003g0029
a0001c0001t0003g0151
a0001c0001t0012g0025
a0001c0001t0017g0146
a0001c0001t0038g0150
a0001c0001t0040g0027
a0001c0003t0026g0148
a0002c0005t0003g0030
 11 HG01081.hp2
HG01109.hp1
HG02258.hp1
others(8): Show 
HG01081.hp2
HG01109.hp1
HG02258.hp1
HG02280.hp1
HG02717.hp1
HG02886.hp2
HG02895.hp1
HG02965.hp1
HG03486.hp2
NA19043.hp1
NA19240.hp1
 intron_variant MODIFIER c.2692+17603C>T
c.2692+17603C>T
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 20/21 chrX 21627220
chrX:21627221 G
G
 A
A
 2 a0001c0001t0001g0060
a0001c0001t0001g0158
a0001c0001t0001g0060
a0001c0001t0001g0158
 2 HG03041.hp2
HG03516.hp1
HG03041.hp2
HG03516.hp1
 intron_variant MODIFIER c.2692+17604G>A
c.2692+17604G>A
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 20/21 chrX 21627221
chrX:21627250 T
T
 G
G
 2 a0001c0001t0001g0068
a0001c0001t0033g0002
a0001c0001t0001g0068
a0001c0001t0033g0002
 2 NA18989.hp1
NA19006.hp1
NA18989.hp1
NA19006.hp1
 intron_variant MODIFIER c.2692+17633T>G
c.2692+17633T>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 20/21 chrX 21627250
chrX:21627336 C
C
 CA
CA
 10 a0001c0001t0006g0155
a0001c0001t0006g0157
a0001c0001t0006g0159
others(7): Show 
a0001c0001t0006g0155
a0001c0001t0006g0157
a0001c0001t0006g0159
a0001c0001t0006g0160
a0001c0001t0006g0161
a0001c0001t0017g0018
a0001c0001t0023g0006
a0001c0001t0043g0007
a0001c0006t0028g0059
a0003c0004t0006g0154
 10 HG01071.hp2
HG01884.hp1
HG02615.hp2
others(7): Show 
HG01071.hp2
HG01884.hp1
HG02615.hp2
HG02886.hp1
HG02922.hp2
HG02976.hp1
HG03130.hp1
HG03491.hp2
HG03516.hp2
HG03654.hp1
 intron_variant MODIFIER c.2692+17732dupA
c.2692+17732dupA
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 20/21 INFO_REALIGN_3_PRIME chrX 21627336
chrX:21627424 G
G
 A
A
 1 a0001c0001t0024g0156
a0001c0001t0024g0156
 1 NA20300.hp2
NA20300.hp2
 intron_variant MODIFIER c.2692+17807G>A
c.2692+17807G>A
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 20/21 chrX 21627424
chrX:21627454 G
G
 A
A
 1 a0001c0001t0012g0045
a0001c0001t0012g0045
 1 HG02145.hp1
HG02145.hp1
 intron_variant MODIFIER c.2692+17837G>A
c.2692+17837G>A
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 20/21 chrX 21627454
chrX:21627522 TG
TG
 T
T
 1 a0001c0001t0039g0144
a0001c0001t0039g0144
 1 NA19055.hp1
NA19055.hp1
 intron_variant MODIFIER c.2692+17908delG
c.2692+17908delG
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 20/21 INFO_REALIGN_3_PRIME chrX 21627522
chrX:21628395 C
C
 G
G
 2 a0001c0001t0007g0022
a0001c0001t0025g0130
a0001c0001t0007g0022
a0001c0001t0025g0130
 2 HG02132.hp1
NA19062.hp1
HG02132.hp1
NA19062.hp1
 intron_variant MODIFIER c.2692+18778C>G
c.2692+18778C>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 20/21 chrX 21628395
chrX:21628726 C
C
 T
T
 4 a0001c0001t0002g0111
a0001c0001t0004g0020
a0001c0001t0004g0021
others(1): Show 
a0001c0001t0002g0111
a0001c0001t0004g0020
a0001c0001t0004g0021
a0001c0001t0004g0057
 4 HG00741.hp2
HG01192.hp1
HG01256.hp1
others(1): Show 
HG00741.hp2
HG01192.hp1
HG01256.hp1
homoSapiens_chm13v2.hp1
 intron_variant MODIFIER c.2692+19109C>T
c.2692+19109C>T
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 20/21 chrX 21628726
chrX:21628854 T
T
 A
A
 1 a0001c0001t0041g0009
a0001c0001t0041g0009
 1 HG03098.hp1
HG03098.hp1
 intron_variant MODIFIER c.2692+19237T>A
c.2692+19237T>A
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 20/21 chrX 21628854
chrX:21629422 C
C
 T
T
 1 a0001c0001t0001g0048
a0001c0001t0001g0048
 1 HG00673.hp1
HG00673.hp1
 intron_variant MODIFIER c.2693-19409C>T
c.2693-19409C>T
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 20/21 chrX 21629422
chrX:21629677 C
C
 T
T
 5 a0001c0001t0001g0071
a0001c0001t0005g0063
a0001c0001t0005g0072
others(2): Show 
a0001c0001t0001g0071
a0001c0001t0005g0063
a0001c0001t0005g0072
a0001c0001t0022g0033
a0001c0001t0032g0163
 5 HG02055.hp1
NA18945.hp1
NA18962.hp1
others(2): Show 
HG02055.hp1
NA18945.hp1
NA18962.hp1
NA19058.hp1
NA19063.hp1
 intron_variant MODIFIER c.2693-19154C>T
c.2693-19154C>T
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 20/21 chrX 21629677
chrX:21629772 G
G
 A
A
 1 a0001c0001t0001g0080
a0001c0001t0001g0080
 1 HG01255.hp1
HG01255.hp1
 intron_variant MODIFIER c.2693-19059G>A
c.2693-19059G>A
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 20/21 chrX 21629772
chrX:21629815 T
T
 A
A
 1 a0001c0001t0001g0082
a0001c0001t0001g0082
 1 HG01928.hp1
HG01928.hp1
 intron_variant MODIFIER c.2693-19016T>A
c.2693-19016T>A
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 20/21 chrX 21629815
chrX:21629859 G
G
 A
A
 4 a0001c0001t0020g0141
a0001c0001t0042g0008
a0001c0003t0014g0147
others(1): Show 
a0001c0001t0020g0141
a0001c0001t0042g0008
a0001c0003t0014g0147
a0001c0003t0014g0149
 4 HG01243.hp1
HG02615.hp1
HG02647.hp1
others(1): Show 
HG01243.hp1
HG02615.hp1
HG02647.hp1
HG03471.hp1
 intron_variant MODIFIER c.2693-18972G>A
c.2693-18972G>A
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 20/21 chrX 21629859
chrX:21629881 G
G
 A
A
 1 a0001c0001t0042g0008
a0001c0001t0042g0008
 1 HG02647.hp1
HG02647.hp1
 intron_variant MODIFIER c.2693-18950G>A
c.2693-18950G>A
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 20/21 chrX 21629881
chrX:21630122 TAAAGTC
TAAAGTC
 T
T
 1 a0001c0001t0012g0045
a0001c0001t0012g0045
 1 HG02145.hp1
HG02145.hp1
 intron_variant MODIFIER c.2693-18704_2693-18
others(12): Show 
c.2693-18704_2693-18699delTCAAAG
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 20/21 INFO_REALIGN_3_PRIME chrX 21630122
chrX:21630182 T
T
 G
G
 3 a0001c0001t0020g0141
a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0001t0020g0141
a0001c0003t0014g0147
a0001c0003t0014g0149
 3 HG01243.hp1
HG02615.hp1
HG03471.hp1
HG01243.hp1
HG02615.hp1
HG03471.hp1
 intron_variant MODIFIER c.2693-18649T>G
c.2693-18649T>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 20/21 chrX 21630182
chrX:21630306 A
A
 G
G
 8 a0001c0001t0002g0028
a0001c0001t0003g0015
a0001c0001t0003g0024
others(5): Show 
a0001c0001t0002g0028
a0001c0001t0003g0015
a0001c0001t0003g0024
a0001c0001t0003g0029
a0001c0001t0003g0151
a0001c0001t0017g0146
a0001c0001t0038g0150
a0001c0001t0040g0027
 8 HG01081.hp2
HG01109.hp1
HG02258.hp1
others(5): Show 
HG01081.hp2
HG01109.hp1
HG02258.hp1
HG02280.hp1
HG02717.hp1
HG02895.hp1
NA19043.hp1
NA19240.hp1
 intron_variant MODIFIER c.2693-18525A>G
c.2693-18525A>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 20/21 chrX 21630306
chrX:21630469 TACA
TACA
 T
T
 2 a0001c0001t0003g0070
a0001c0001t0035g0054
a0001c0001t0003g0070
a0001c0001t0035g0054
 2 NA18967.hp1
NA18994.hp1
NA18967.hp1
NA18994.hp1
 intron_variant MODIFIER c.2693-18356_2693-18
others(9): Show 
c.2693-18356_2693-18354delAAC
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 20/21 INFO_REALIGN_3_PRIME chrX 21630469
chrX:21630581 T
T
 TCAGA
TCAGA
 5 a0001c0001t0007g0140
a0001c0001t0010g0152
a0001c0001t0010g0153
others(2): Show 
a0001c0001t0007g0140
a0001c0001t0010g0152
a0001c0001t0010g0153
a0001c0001t0010g0162
a0001c0001t0017g0018
 5 HG01071.hp2
HG02922.hp1
HG03209.hp1
others(2): Show 
HG01071.hp2
HG02922.hp1
HG03209.hp1
HG03225.hp1
NA19240.hp2
 intron_variant MODIFIER c.2693-18243_2693-18
others(10): Show 
c.2693-18243_2693-18240dupGACA
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 20/21 INFO_REALIGN_3_PRIME chrX 21630581
chrX:21630698 T
T
 TAC
TAC
 10 a0001c0001t0007g0140
a0001c0001t0010g0152
a0001c0001t0010g0153
others(7): Show 
a0001c0001t0007g0140
a0001c0001t0010g0152
a0001c0001t0010g0153
a0001c0001t0010g0162
a0001c0001t0017g0018
a0001c0001t0019g0014
a0001c0001t0020g0141
a0001c0001t0042g0008
a0001c0003t0014g0147
a0001c0003t0014g0149
 10 HG01071.hp2
HG01243.hp1
HG01884.hp2
others(7): Show 
HG01071.hp2
HG01243.hp1
HG01884.hp2
HG02615.hp1
HG02647.hp1
HG02922.hp1
HG03209.hp1
HG03225.hp1
HG03471.hp1
NA19240.hp2
 intron_variant MODIFIER c.2693-18121_2693-18
others(8): Show 
c.2693-18121_2693-18120dupCA
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 20/21 INFO_REALIGN_3_PRIME chrX 21630698
chrX:21630714 C
C
 CATAT
CATAT
 4 a0001c0001t0001g0077
a0001c0001t0002g0112
a0001c0001t0004g0056
others(1): Show 
a0001c0001t0001g0077
a0001c0001t0002g0112
a0001c0001t0004g0056
a0001c0001t0013g0066
 4 HG00735.hp2
HG00741.hp1
HG01167.hp1
others(1): Show 
HG00735.hp2
HG00741.hp1
HG01167.hp1
HG01433.hp1
 intron_variant MODIFIER c.2693-18106_2693-18
others(10): Show 
c.2693-18106_2693-18103dupATAT
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 20/21 INFO_REALIGN_3_PRIME chrX 21630714
chrX:21630840 A
A
 C
C
 10 a0001c0001t0007g0140
a0001c0001t0010g0152
a0001c0001t0010g0153
others(7): Show 
a0001c0001t0007g0140
a0001c0001t0010g0152
a0001c0001t0010g0153
a0001c0001t0010g0162
a0001c0001t0017g0018
a0001c0001t0019g0014
a0001c0001t0020g0141
a0001c0001t0042g0008
a0001c0003t0014g0147
a0001c0003t0014g0149
 10 HG01071.hp2
HG01243.hp1
HG01884.hp2
others(7): Show 
HG01071.hp2
HG01243.hp1
HG01884.hp2
HG02615.hp1
HG02647.hp1
HG02922.hp1
HG03209.hp1
HG03225.hp1
HG03471.hp1
NA19240.hp2
 intron_variant MODIFIER c.2693-17991A>C
c.2693-17991A>C
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 20/21 chrX 21630840
chrX:21630872 A
A
 G
G
 6 a0001c0001t0007g0140
a0001c0001t0010g0152
a0001c0001t0010g0153
others(3): Show 
a0001c0001t0007g0140
a0001c0001t0010g0152
a0001c0001t0010g0153
a0001c0001t0010g0162
a0001c0001t0017g0018
a0001c0001t0019g0014
 6 HG01071.hp2
HG01884.hp2
HG02922.hp1
others(3): Show 
HG01071.hp2
HG01884.hp2
HG02922.hp1
HG03209.hp1
HG03225.hp1
NA19240.hp2
 intron_variant MODIFIER c.2693-17959A>G
c.2693-17959A>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 20/21 chrX 21630872
chrX:21631030 T
T
 A
A
 7 a0001c0001t0001g0137
a0001c0001t0007g0140
a0001c0001t0010g0152
others(4): Show 
a0001c0001t0001g0137
a0001c0001t0007g0140
a0001c0001t0010g0152
a0001c0001t0010g0153
a0001c0001t0010g0162
a0001c0001t0017g0018
a0001c0001t0019g0014
 7 HG01071.hp2
HG01884.hp2
HG02922.hp1
others(4): Show 
HG01071.hp2
HG01884.hp2
HG02922.hp1
HG03209.hp1
HG03225.hp1
HG03490.hp1
NA19240.hp2
 intron_variant MODIFIER c.2693-17801T>A
c.2693-17801T>A
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 20/21 chrX 21631030
chrX:21631030 T
T
 TA
TA
 1 a0001c0001t0042g0008
a0001c0001t0042g0008
 1 HG02647.hp1
HG02647.hp1
 intron_variant MODIFIER c.2693-17792dupA
c.2693-17792dupA
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 20/21 INFO_REALIGN_3_PRIME chrX 21631030
chrX:21631314 G
G
 A
A
 5 a0001c0001t0009g0010
a0001c0001t0009g0011
a0001c0001t0009g0012
others(2): Show 
a0001c0001t0009g0010
a0001c0001t0009g0011
a0001c0001t0009g0012
a0001c0001t0009g0013
a0001c0001t0041g0009
 5 HG02280.hp2
HG02572.hp1
HG02809.hp1
others(2): Show 
HG02280.hp2
HG02572.hp1
HG02809.hp1
HG03098.hp1
HG03486.hp1
 intron_variant MODIFIER c.2693-17517G>A
c.2693-17517G>A
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 20/21 chrX 21631314
chrX:21631431 G
G
 A
A
 1 a0001c0002t0001g0105
a0001c0002t0001g0105
 1 HG01943.hp1
HG01943.hp1
 intron_variant MODIFIER c.2693-17400G>A
c.2693-17400G>A
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 20/21 chrX 21631431
chrX:21631450 G
G
 A
A
 1 a0001c0001t0042g0008
a0001c0001t0042g0008
 1 HG02647.hp1
HG02647.hp1
 intron_variant MODIFIER c.2693-17381G>A
c.2693-17381G>A
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 20/21 chrX 21631450
chrX:21631670 T
T
 C
C
 1 a0001c0002t0001g0042
a0001c0002t0001g0042
 1 HG01934.hp1
HG01934.hp1
 intron_variant MODIFIER c.2693-17161T>C
c.2693-17161T>C
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 20/21 chrX 21631670
chrX:21631848 A
A
 G
G
 1 a0001c0001t0006g0157
a0001c0001t0006g0157
 1 HG03130.hp1
HG03130.hp1
 intron_variant MODIFIER c.2693-16983A>G
c.2693-16983A>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 20/21 chrX 21631848
chrX:21631874 A
A
 G
G
 3 a0001c0001t0020g0141
a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0001t0020g0141
a0001c0003t0014g0147
a0001c0003t0014g0149
 3 HG01243.hp1
HG02615.hp1
HG03471.hp1
HG01243.hp1
HG02615.hp1
HG03471.hp1
 intron_variant MODIFIER c.2693-16957A>G
c.2693-16957A>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 20/21 chrX 21631874
chrX:21632392 T
T
 A
A
 1 a0001c0001t0042g0008
a0001c0001t0042g0008
 1 HG02647.hp1
HG02647.hp1
 intron_variant MODIFIER c.2693-16439T>A
c.2693-16439T>A
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 20/21 chrX 21632392
chrX:21632812 TTAAG
TTAAG
 T
T
 1 a0001c0001t0042g0008
a0001c0001t0042g0008
 1 HG02647.hp1
HG02647.hp1
 intron_variant MODIFIER c.2693-16018_2693-16
others(10): Show 
c.2693-16018_2693-16015delTAAG
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 20/21 chrX 21632812
chrX:21632990 T
T
 TAC
TAC
 16 a0001c0001t0001g0068
a0001c0001t0001g0089
a0001c0001t0001g0090
others(13): Show 
a0001c0001t0001g0068
a0001c0001t0001g0089
a0001c0001t0001g0090
a0001c0001t0001g0128
a0001c0001t0002g0019
a0001c0001t0003g0116
a0001c0001t0004g0117
a0001c0001t0006g0157
a0001c0001t0006g0159
a0001c0001t0007g0140
a0001c0001t0010g0152
a0001c0001t0017g0018
a0001c0001t0020g0141
a0001c0001t0033g0002
a0001c0003t0026g0148
a0001c0006t0028g0059
 16 HG01071.hp2
HG01106.hp1
HG01243.hp1
others(13): Show 
HG01071.hp2
HG01106.hp1
HG01243.hp1
HG02015.hp1
HG02886.hp1
HG02922.hp1
HG02965.hp1
HG03017.hp1
HG03130.hp1
HG03225.hp1
HG03516.hp2
NA18989.hp1
NA19005.hp1
NA19006.hp1
NA19066.hp1
NA19088.hp1
 intron_variant MODIFIER c.2693-15807_2693-15
others(8): Show 
c.2693-15807_2693-15806dupCA
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 20/21 INFO_REALIGN_3_PRIME chrX 21632990
chrX:21632990 T
T
 TACAC
TACAC
 2 a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0014g0147
a0001c0003t0014g0149
 2 HG02615.hp1
HG03471.hp1
HG02615.hp1
HG03471.hp1
 intron_variant MODIFIER c.2693-15809_2693-15
others(10): Show 
c.2693-15809_2693-15806dupCACA
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 20/21 INFO_REALIGN_3_PRIME chrX 21632990
chrX:21632990 T
T
 TACACAC
TACACAC
 1 a0001c0001t0022g0033
a0001c0001t0022g0033
 1 HG02055.hp1
HG02055.hp1
 intron_variant MODIFIER c.2693-15811_2693-15
others(12): Show 
c.2693-15811_2693-15806dupCACACA
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 20/21 INFO_REALIGN_3_PRIME chrX 21632990
chrX:21632990 TAC
TAC
 T
T
 8 a0001c0001t0001g0036
a0001c0001t0001g0037
a0001c0001t0001g0067
others(5): Show 
a0001c0001t0001g0036
a0001c0001t0001g0037
a0001c0001t0001g0067
a0001c0001t0001g0077
a0001c0001t0002g0112
a0001c0001t0004g0056
a0001c0001t0009g0013
a0001c0001t0013g0066
 8 HG00735.hp2
HG00741.hp1
HG01167.hp1
others(5): Show 
HG00735.hp2
HG00741.hp1
HG01167.hp1
HG01433.hp1
HG02135.hp1
HG03486.hp1
HG04115.hp1
NA18952.hp1
 intron_variant MODIFIER c.2693-15807_2693-15
others(8): Show 
c.2693-15807_2693-15806delCA
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 20/21 INFO_REALIGN_3_PRIME chrX 21632990
chrX:21632990 TACAC
TACAC
 T
T
 6 a0001c0001t0001g0081
a0001c0001t0001g0109
a0001c0001t0010g0162
others(3): Show 
a0001c0001t0001g0081
a0001c0001t0001g0109
a0001c0001t0010g0162
a0001c0001t0013g0100
a0001c0001t0019g0014
a0001c0001t0042g0008
 6 HG01884.hp2
HG02647.hp1
HG02738.hp1
others(3): Show 
HG01884.hp2
HG02647.hp1
HG02738.hp1
HG03209.hp1
NA18955.hp1
NA19089.hp1
 intron_variant MODIFIER c.2693-15809_2693-15
others(10): Show 
c.2693-15809_2693-15806delCACA
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 20/21 INFO_REALIGN_3_PRIME chrX 21632990
chrX:21632990 TACACAC
TACACAC
 T
T
 17 a0001c0001t0002g0003
a0001c0001t0002g0046
a0001c0001t0002g0047
others(14): Show 
a0001c0001t0002g0003
a0001c0001t0002g0046
a0001c0001t0002g0047
a0001c0001t0002g0049
a0001c0001t0002g0050
a0001c0001t0002g0110
a0001c0001t0002g0118
a0001c0001t0002g0119
a0001c0001t0002g0120
a0001c0001t0002g0121
a0001c0001t0002g0122
a0001c0001t0002g0125
a0001c0001t0002g0126
a0001c0001t0008g0124
a0001c0001t0008g0135
a0001c0001t0008g0143
a0001c0001t0039g0144
 17 HG00621.hp1
HG02074.hp1
HG02083.hp1
others(14): Show 
HG00621.hp1
HG02074.hp1
HG02083.hp1
NA18612.hp1
NA18943.hp1
NA18944.hp1
NA18966.hp1
NA18986.hp1
NA18990.hp1
NA19000.hp1
NA19004.hp1
NA19012.hp1
NA19055.hp1
NA19070.hp1
NA19076.hp1
NA19086.hp1
NA19091.hp1
 intron_variant MODIFIER c.2693-15811_2693-15
others(12): Show 
c.2693-15811_2693-15806delCACACA
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 20/21 INFO_REALIGN_3_PRIME chrX 21632990
chrX:21633350 A
A
 G
G
 3 a0001c0001t0002g0004
a0001c0001t0003g0031
a0001c0001t0008g0005
a0001c0001t0002g0004
a0001c0001t0003g0031
a0001c0001t0008g0005
 3 HG01069.hp1
HG01071.hp1
HG02976.hp2
HG01069.hp1
HG01071.hp1
HG02976.hp2
 intron_variant MODIFIER c.2693-15481A>G
c.2693-15481A>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 20/21 chrX 21633350
chrX:21633417 T
T
 C
C
 3 a0001c0001t0001g0077
a0001c0001t0002g0112
a0001c0001t0013g0066
a0001c0001t0001g0077
a0001c0001t0002g0112
a0001c0001t0013g0066
 3 HG00735.hp2
HG01167.hp1
HG01433.hp1
HG00735.hp2
HG01167.hp1
HG01433.hp1
 intron_variant MODIFIER c.2693-15414T>C
c.2693-15414T>C
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 20/21 chrX 21633417
chrX:21633580 A
A
 ACT
ACT
 10 a0001c0001t0007g0140
a0001c0001t0010g0152
a0001c0001t0010g0153
others(7): Show 
a0001c0001t0007g0140
a0001c0001t0010g0152
a0001c0001t0010g0153
a0001c0001t0010g0162
a0001c0001t0017g0018
a0001c0001t0019g0014
a0001c0001t0020g0141
a0001c0001t0042g0008
a0001c0003t0014g0147
a0001c0003t0014g0149
 10 HG01071.hp2
HG01243.hp1
HG01884.hp2
others(7): Show 
HG01071.hp2
HG01243.hp1
HG01884.hp2
HG02615.hp1
HG02647.hp1
HG02922.hp1
HG03209.hp1
HG03225.hp1
HG03471.hp1
NA19240.hp2
 intron_variant MODIFIER c.2693-15249_2693-15
others(8): Show 
c.2693-15249_2693-15248dupTC
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 20/21 INFO_REALIGN_3_PRIME chrX 21633580
chrX:21633631 G
G
 A
A
 1 a0001c0007t0036g0026
a0001c0007t0036g0026
 1 HG01081.hp1
HG01081.hp1
 intron_variant MODIFIER c.2693-15200G>A
c.2693-15200G>A
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 20/21 chrX 21633631
chrX:21633758 T
T
 C
C
 1 a0001c0001t0042g0008
a0001c0001t0042g0008
 1 HG02647.hp1
HG02647.hp1
 intron_variant MODIFIER c.2693-15073T>C
c.2693-15073T>C
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 20/21 chrX 21633758
chrX:21634066 A
A
 G
G
 1 a0001c0001t0021g0088
a0001c0001t0021g0088
 1 NA19060.hp1
NA19060.hp1
 intron_variant MODIFIER c.2693-14765A>G
c.2693-14765A>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 20/21 chrX 21634066
chrX:21634075 TTTC
TTTC
 T
T
 1 a0001c0001t0002g0019
a0001c0001t0002g0019
 1 HG01106.hp1
HG01106.hp1
 intron_variant MODIFIER c.2693-14750_2693-14
others(9): Show 
c.2693-14750_2693-14748delCTT
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 20/21 INFO_REALIGN_3_PRIME chrX 21634075
chrX:21634111 CT
CT
 C
C
 2 a0001c0001t0002g0119
a0001c0001t0002g0122
a0001c0001t0002g0119
a0001c0001t0002g0122
 2 NA18966.hp1
NA19070.hp1
NA18966.hp1
NA19070.hp1
 intron_variant MODIFIER c.2693-14719delT
c.2693-14719delT
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 20/21 chrX 21634111
chrX:21634227 C
C
 G
G
 7 a0001c0001t0006g0155
a0001c0001t0006g0160
a0001c0001t0006g0161
others(4): Show 
a0001c0001t0006g0155
a0001c0001t0006g0160
a0001c0001t0006g0161
a0001c0001t0017g0018
a0001c0001t0023g0006
a0001c0001t0043g0007
a0003c0004t0006g0154
 7 HG01071.hp2
HG01884.hp1
HG02615.hp2
others(4): Show 
HG01071.hp2
HG01884.hp1
HG02615.hp2
HG02922.hp2
HG02976.hp1
HG03491.hp2
HG03654.hp1
 intron_variant MODIFIER c.2693-14604C>G
c.2693-14604C>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 20/21 chrX 21634227
chrX:21634491 G
G
 T
T
 1 a0001c0001t0042g0008
a0001c0001t0042g0008
 1 HG02647.hp1
HG02647.hp1
 intron_variant MODIFIER c.2693-14340G>T
c.2693-14340G>T
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 20/21 chrX 21634491
chrX:21634520 T
T
 A
A
 1 a0001c0001t0020g0141
a0001c0001t0020g0141
 1 HG01243.hp1
HG01243.hp1
 intron_variant MODIFIER c.2693-14311T>A
c.2693-14311T>A
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 20/21 chrX 21634520
chrX:21634879 C
C
 T
T
 6 a0001c0001t0010g0152
a0001c0001t0010g0153
a0001c0001t0010g0162
others(3): Show 
a0001c0001t0010g0152
a0001c0001t0010g0153
a0001c0001t0010g0162
a0001c0001t0042g0008
a0001c0003t0014g0147
a0001c0003t0014g0149
 6 HG02615.hp1
HG02647.hp1
HG03209.hp1
others(3): Show 
HG02615.hp1
HG02647.hp1
HG03209.hp1
HG03225.hp1
HG03471.hp1
NA19240.hp2
 intron_variant MODIFIER c.2693-13952C>T
c.2693-13952C>T
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 20/21 chrX 21634879
chrX:21635028 C
C
 T
T
 1 a0001c0001t0002g0019
a0001c0001t0002g0019
 1 HG01106.hp1
HG01106.hp1
 intron_variant MODIFIER c.2693-13803C>T
c.2693-13803C>T
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 20/21 chrX 21635028
chrX:21635378 A
A
 ATG
ATG
 2 a0001c0001t0001g0001
a0001c0001t0037g0092
a0001c0001t0001g0001
a0001c0001t0037g0092
 2 HG04204.hp1
NA19068.hp1
HG04204.hp1
NA19068.hp1
 intron_variant MODIFIER c.2693-13423_2693-13
others(8): Show 
c.2693-13423_2693-13422dupGT
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 20/21 INFO_REALIGN_3_PRIME chrX 21635378
chrX:21635378 A
A
 ATGTGTG
ATGTGTG
 1 a0001c0001t0013g0100
a0001c0001t0013g0100
 1 NA18955.hp1
NA18955.hp1
 intron_variant MODIFIER c.2693-13427_2693-13
others(12): Show 
c.2693-13427_2693-13422dupGTGTGT
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 20/21 INFO_REALIGN_3_PRIME chrX 21635378
chrX:21635378 ATG
ATG
 A
A
 58 a0001c0001t0001g0077
a0001c0001t0002g0003
a0001c0001t0002g0004
others(55): Show 
a0001c0001t0001g0077
a0001c0001t0002g0003
a0001c0001t0002g0004
a0001c0001t0002g0019
a0001c0001t0002g0046
a0001c0001t0002g0047
a0001c0001t0002g0049
a0001c0001t0002g0050
a0001c0001t0002g0112
a0001c0001t0002g0115
a0001c0001t0002g0118
a0001c0001t0002g0120
a0001c0001t0002g0121
a0001c0001t0002g0122
a0001c0001t0002g0125
a0001c0001t0002g0126
a0001c0001t0003g0015
a0001c0001t0003g0024
a0001c0001t0003g0029
a0001c0001t0003g0031
a0001c0001t0003g0151
a0001c0001t0004g0056
a0001c0001t0006g0157
a0001c0001t0006g0159
a0001c0001t0006g0160
a0001c0001t0006g0161
a0001c0001t0008g0005
a0001c0001t0008g0124
a0001c0001t0008g0135
a0001c0001t0008g0143
a0001c0001t0009g0011
a0001c0001t0009g0012
a0001c0001t0009g0013
a0001c0001t0011g0016
a0001c0001t0011g0017
a0001c0001t0011g0138
a0001c0001t0012g0025
a0001c0001t0012g0045
a0001c0001t0012g0142
a0001c0001t0013g0066
a0001c0001t0017g0146
a0001c0001t0019g0014
a0001c0001t0020g0141
a0001c0001t0022g0033
a0001c0001t0027g0034
a0001c0001t0038g0150
a0001c0001t0039g0144
a0001c0001t0040g0027
a0001c0001t0041g0009
a0001c0001t0042g0008
a0001c0001t0043g0007
a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
a0001c0006t0028g0059
a0001c0007t0036g0026
a0002c0005t0003g0030
a0003c0004t0006g0154
 58 HG00621.hp1
HG00735.hp2
HG00741.hp1
others(55): Show 
HG00621.hp1
HG00735.hp2
HG00741.hp1
HG01069.hp1
HG01071.hp1
HG01081.hp1
HG01081.hp2
HG01106.hp1
HG01109.hp1
HG01167.hp1
HG01243.hp1
HG01433.hp1
HG01884.hp1
HG01884.hp2
HG02055.hp1
HG02083.hp1
HG02145.hp1
HG02280.hp1
HG02486.hp1
HG02572.hp1
HG02615.hp1
HG02615.hp2
HG02647.hp1
HG02717.hp1
HG02809.hp1
HG02886.hp1
HG02886.hp2
HG02895.hp1
HG02965.hp1
HG02976.hp1
HG02976.hp2
HG03041.hp1
HG03098.hp1
HG03130.hp1
HG03139.hp1
HG03471.hp1
HG03486.hp1
HG03486.hp2
HG03491.hp2
HG03516.hp2
HG03579.hp1
NA18522.hp1
NA18612.hp1
NA18943.hp1
NA18944.hp1
NA18974.hp1
NA18986.hp1
NA18990.hp1
NA19000.hp1
NA19004.hp1
NA19012.hp1
NA19043.hp1
NA19055.hp1
NA19070.hp1
NA19076.hp1
NA19086.hp1
NA19091.hp1
NA19240.hp1
 intron_variant MODIFIER c.2693-13423_2693-13
others(8): Show 
c.2693-13423_2693-13422delGT
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 20/21 INFO_REALIGN_3_PRIME chrX 21635378
chrX:21635378 ATGTG
ATGTG
 A
A
 8 a0001c0001t0002g0028
a0001c0001t0004g0064
a0001c0001t0007g0140
others(5): Show 
a0001c0001t0002g0028
a0001c0001t0004g0064
a0001c0001t0007g0140
a0001c0001t0009g0010
a0001c0001t0010g0152
a0001c0001t0010g0153
a0001c0001t0010g0162
a0001c0001t0017g0018
 8 HG00738.hp1
HG01071.hp2
HG02258.hp1
others(5): Show 
HG00738.hp1
HG01071.hp2
HG02258.hp1
HG02280.hp2
HG02922.hp1
HG03209.hp1
HG03225.hp1
NA19240.hp2
 intron_variant MODIFIER c.2693-13425_2693-13
others(10): Show 
c.2693-13425_2693-13422delGTGT
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 20/21 INFO_REALIGN_3_PRIME chrX 21635378
chrX:21635406 G
G
 GTATATAT
others(23): Show 
GTATATATACACATATATATGTATATGTGTA
 1 a0001c0001t0002g0119
a0001c0001t0002g0119
 1 NA18966.hp1
NA18966.hp1
 intron_variant MODIFIER c.2693-13424_2693-13
others(36): Show 
c.2693-13424_2693-13423insATATATACACATATATATGTATAT
GTGTAT
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 20/21 INFO_REALIGN_3_PRIME chrX 21635406
chrX:21635408 G
G
 A
A
 8 a0001c0001t0002g0119
a0001c0001t0007g0140
a0001c0001t0010g0152
others(5): Show 
a0001c0001t0002g0119
a0001c0001t0007g0140
a0001c0001t0010g0152
a0001c0001t0010g0153
a0001c0001t0010g0162
a0001c0001t0017g0018
a0001c0003t0014g0147
a0001c0003t0014g0149
 8 HG01071.hp2
HG02615.hp1
HG02922.hp1
others(5): Show 
HG01071.hp2
HG02615.hp1
HG02922.hp1
HG03209.hp1
HG03225.hp1
HG03471.hp1
NA18966.hp1
NA19240.hp2
 intron_variant MODIFIER c.2693-13423G>A
c.2693-13423G>A
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 20/21 chrX 21635408
chrX:21635410 A
A
 G
G
 1 a0001c0001t0001g0073
a0001c0001t0001g0073
 1 HG01515.hp1
HG01515.hp1
 intron_variant MODIFIER c.2693-13421A>G
c.2693-13421A>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 20/21 chrX 21635410
chrX:21635420 A
A
 C
C
 4 a0001c0001t0010g0152
a0001c0001t0010g0153
a0001c0001t0010g0162
others(1): Show 
a0001c0001t0010g0152
a0001c0001t0010g0153
a0001c0001t0010g0162
a0001c0001t0017g0018
 4 HG01071.hp2
HG03209.hp1
HG03225.hp1
others(1): Show 
HG01071.hp2
HG03209.hp1
HG03225.hp1
NA19240.hp2
 intron_variant MODIFIER c.2693-13411A>C
c.2693-13411A>C
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 20/21 chrX 21635420
chrX:21635452 CTA
CTA
 C
C
 1 a0001c0001t0006g0160
a0001c0001t0006g0160
 1 HG02615.hp2
HG02615.hp2
 intron_variant MODIFIER c.2693-13371_2693-13
others(8): Show 
c.2693-13371_2693-13370delAT
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 20/21 INFO_REALIGN_3_PRIME chrX 21635452
chrX:21635502 G
G
 A
A
 28 a0001c0001t0003g0029
a0001c0001t0006g0155
a0001c0001t0006g0157
others(25): Show 
a0001c0001t0003g0029
a0001c0001t0006g0155
a0001c0001t0006g0157
a0001c0001t0006g0159
a0001c0001t0006g0160
a0001c0001t0006g0161
a0001c0001t0007g0140
a0001c0001t0009g0010
a0001c0001t0009g0011
a0001c0001t0009g0012
a0001c0001t0009g0013
a0001c0001t0010g0152
a0001c0001t0010g0153
a0001c0001t0010g0162
a0001c0001t0011g0016
a0001c0001t0011g0017
a0001c0001t0011g0138
a0001c0001t0012g0025
a0001c0001t0017g0018
a0001c0001t0019g0014
a0001c0001t0041g0009
a0001c0001t0042g0008
a0001c0001t0043g0007
a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0006t0028g0059
a0001c0007t0036g0026
a0003c0004t0006g0154
 28 HG01071.hp2
HG01081.hp1
HG01884.hp1
others(25): Show 
HG01071.hp2
HG01081.hp1
HG01884.hp1
HG01884.hp2
HG02280.hp2
HG02572.hp1
HG02615.hp1
HG02615.hp2
HG02647.hp1
HG02809.hp1
HG02886.hp1
HG02895.hp1
HG02922.hp1
HG02922.hp2
HG02976.hp1
HG03041.hp1
HG03098.hp1
HG03130.hp1
HG03209.hp1
HG03225.hp1
HG03471.hp1
HG03486.hp1
HG03486.hp2
HG03491.hp2
HG03516.hp2
HG03579.hp1
NA18522.hp1
NA19240.hp2
 intron_variant MODIFIER c.2693-13329G>A
c.2693-13329G>A
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 20/21 chrX 21635502
chrX:21635503 T
T
 A
A
 28 a0001c0001t0003g0029
a0001c0001t0006g0155
a0001c0001t0006g0157
others(25): Show 
a0001c0001t0003g0029
a0001c0001t0006g0155
a0001c0001t0006g0157
a0001c0001t0006g0159
a0001c0001t0006g0160
a0001c0001t0006g0161
a0001c0001t0007g0140
a0001c0001t0009g0010
a0001c0001t0009g0011
a0001c0001t0009g0012
a0001c0001t0009g0013
a0001c0001t0010g0152
a0001c0001t0010g0153
a0001c0001t0010g0162
a0001c0001t0011g0016
a0001c0001t0011g0017
a0001c0001t0011g0138
a0001c0001t0012g0025
a0001c0001t0017g0018
a0001c0001t0019g0014
a0001c0001t0041g0009
a0001c0001t0042g0008
a0001c0001t0043g0007
a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0006t0028g0059
a0001c0007t0036g0026
a0003c0004t0006g0154
 28 HG01071.hp2
HG01081.hp1
HG01884.hp1
others(25): Show 
HG01071.hp2
HG01081.hp1
HG01884.hp1
HG01884.hp2
HG02280.hp2
HG02572.hp1
HG02615.hp1
HG02615.hp2
HG02647.hp1
HG02809.hp1
HG02886.hp1
HG02895.hp1
HG02922.hp1
HG02922.hp2
HG02976.hp1
HG03041.hp1
HG03098.hp1
HG03130.hp1
HG03209.hp1
HG03225.hp1
HG03471.hp1
HG03486.hp1
HG03486.hp2
HG03491.hp2
HG03516.hp2
HG03579.hp1
NA18522.hp1
NA19240.hp2
 intron_variant MODIFIER c.2693-13328T>A
c.2693-13328T>A
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 20/21 chrX 21635503
chrX:21635523 T
T
 C
C
 3 a0001c0001t0010g0152
a0001c0001t0010g0153
a0001c0001t0010g0162
a0001c0001t0010g0152
a0001c0001t0010g0153
a0001c0001t0010g0162
 3 HG03209.hp1
HG03225.hp1
NA19240.hp2
HG03209.hp1
HG03225.hp1
NA19240.hp2
 intron_variant MODIFIER c.2693-13308T>C
c.2693-13308T>C
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 20/21 chrX 21635523
chrX:21635550 GTGTATAT
others(1): Show 
GTGTATATA
 G
G
 5 a0001c0001t0020g0141
a0001c0001t0022g0033
a0001c0001t0027g0034
others(2): Show 
a0001c0001t0020g0141
a0001c0001t0022g0033
a0001c0001t0027g0034
a0001c0003t0014g0147
a0001c0003t0014g0149
 5 HG01243.hp1
HG02055.hp1
HG02486.hp1
others(2): Show 
HG01243.hp1
HG02055.hp1
HG02486.hp1
HG02615.hp1
HG03471.hp1
 intron_variant MODIFIER c.2693-13263_2693-13
others(14): Show 
c.2693-13263_2693-13256delGTATATAT
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 20/21 INFO_REALIGN_3_PRIME chrX 21635550
chrX:21635902 C
C
 T
T
 1 a0001c0001t0013g0066
a0001c0001t0013g0066
 1 HG01167.hp1
HG01167.hp1
 intron_variant MODIFIER c.2693-12929C>T
c.2693-12929C>T
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 20/21 chrX 21635902
chrX:21636277 G
G
 GA
GA
 5 a0001c0001t0007g0140
a0001c0001t0010g0152
a0001c0001t0010g0153
others(2): Show 
a0001c0001t0007g0140
a0001c0001t0010g0152
a0001c0001t0010g0153
a0001c0001t0010g0162
a0001c0001t0017g0018
 5 HG01071.hp2
HG02922.hp1
HG03209.hp1
others(2): Show 
HG01071.hp2
HG02922.hp1
HG03209.hp1
HG03225.hp1
NA19240.hp2
 intron_variant MODIFIER c.2693-12550dupA
c.2693-12550dupA
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 20/21 INFO_REALIGN_3_PRIME chrX 21636277
chrX:21636305 C
C
 G
G
 1 a0001c0001t0001g0076
a0001c0001t0001g0076
 1 NA18982.hp1
NA18982.hp1
 intron_variant MODIFIER c.2693-12526C>G
c.2693-12526C>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 20/21 chrX 21636305
chrX:21636332 T
T
 TA
TA
 1 a0001c0001t0020g0141
a0001c0001t0020g0141
 1 HG01243.hp1
HG01243.hp1
 intron_variant MODIFIER c.2693-12488dupA
c.2693-12488dupA
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 20/21 INFO_REALIGN_3_PRIME chrX 21636332
chrX:21636492 G
G
 C
C
 1 a0001c0001t0021g0088
a0001c0001t0021g0088
 1 NA19060.hp1
NA19060.hp1
 intron_variant MODIFIER c.2693-12339G>C
c.2693-12339G>C
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 20/21 chrX 21636492
chrX:21636902 C
C
 T
T
 1 a0001c0001t0029g0023
a0001c0001t0029g0023
 1 HG01099.hp1
HG01099.hp1
 intron_variant MODIFIER c.2693-11929C>T
c.2693-11929C>T
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 20/21 chrX 21636902
chrX:21636912 A
A
 C
C
 1 a0001c0001t0043g0007
a0001c0001t0043g0007
 1 HG03491.hp2
HG03491.hp2
 intron_variant MODIFIER c.2693-11919A>C
c.2693-11919A>C
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 20/21 chrX 21636912
chrX:21637154 C
C
 G
G
 3 a0001c0001t0010g0152
a0001c0001t0010g0153
a0001c0001t0010g0162
a0001c0001t0010g0152
a0001c0001t0010g0153
a0001c0001t0010g0162
 3 HG03209.hp1
HG03225.hp1
NA19240.hp2
HG03209.hp1
HG03225.hp1
NA19240.hp2
 intron_variant MODIFIER c.2693-11677C>G
c.2693-11677C>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 20/21 chrX 21637154
chrX:21637212 G
G
 C
C
 72 a0001c0001t0001g0053
a0001c0001t0001g0077
a0001c0001t0002g0003
others(69): Show 
a0001c0001t0001g0053
a0001c0001t0001g0077
a0001c0001t0002g0003
a0001c0001t0002g0004
a0001c0001t0002g0019
a0001c0001t0002g0028
a0001c0001t0002g0043
a0001c0001t0002g0046
a0001c0001t0002g0047
a0001c0001t0002g0049
a0001c0001t0002g0050
a0001c0001t0002g0110
a0001c0001t0002g0112
a0001c0001t0002g0118
a0001c0001t0002g0119
a0001c0001t0002g0120
a0001c0001t0002g0121
a0001c0001t0002g0122
a0001c0001t0002g0125
a0001c0001t0002g0126
a0001c0001t0003g0015
a0001c0001t0003g0024
a0001c0001t0003g0029
a0001c0001t0003g0031
a0001c0001t0003g0151
a0001c0001t0004g0056
a0001c0001t0006g0155
a0001c0001t0006g0157
a0001c0001t0006g0159
a0001c0001t0006g0160
a0001c0001t0006g0161
a0001c0001t0007g0140
a0001c0001t0008g0005
a0001c0001t0008g0124
a0001c0001t0008g0135
a0001c0001t0008g0143
a0001c0001t0009g0010
a0001c0001t0009g0011
a0001c0001t0009g0012
a0001c0001t0009g0013
a0001c0001t0010g0152
a0001c0001t0010g0153
a0001c0001t0010g0162
a0001c0001t0011g0016
a0001c0001t0011g0017
a0001c0001t0011g0138
a0001c0001t0012g0025
a0001c0001t0012g0045
a0001c0001t0012g0142
a0001c0001t0013g0066
a0001c0001t0017g0018
a0001c0001t0017g0146
a0001c0001t0019g0014
a0001c0001t0020g0141
a0001c0001t0022g0033
a0001c0001t0023g0006
a0001c0001t0024g0156
a0001c0001t0027g0034
a0001c0001t0038g0150
a0001c0001t0039g0144
a0001c0001t0040g0027
a0001c0001t0041g0009
a0001c0001t0042g0008
a0001c0001t0043g0007
a0001c0002t0007g0040
a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0003t0026g0148
a0001c0006t0028g0059
a0001c0007t0036g0026
a0002c0005t0003g0030
a0003c0004t0006g0154
 72 HG00280.hp1
HG00621.hp1
HG00735.hp2
others(69): Show 
HG00280.hp1
HG00621.hp1
HG00735.hp2
HG00741.hp1
HG01069.hp1
HG01071.hp1
HG01071.hp2
HG01081.hp1
HG01081.hp2
HG01106.hp1
HG01109.hp1
HG01167.hp1
HG01243.hp1
HG01433.hp1
HG01884.hp1
HG01884.hp2
HG02027.hp1
HG02055.hp1
HG02074.hp1
HG02083.hp1
HG02145.hp1
HG02258.hp1
HG02280.hp1
HG02280.hp2
HG02486.hp1
HG02572.hp1
HG02615.hp1
HG02615.hp2
HG02647.hp1
HG02717.hp1
HG02809.hp1
HG02809.hp2
HG02886.hp1
HG02886.hp2
HG02895.hp1
HG02922.hp1
HG02922.hp2
HG02965.hp1
HG02976.hp1
HG02976.hp2
HG03041.hp1
HG03098.hp1
HG03130.hp1
HG03139.hp1
HG03209.hp1
HG03225.hp1
HG03471.hp1
HG03486.hp1
HG03486.hp2
HG03491.hp2
HG03516.hp2
HG03579.hp1
HG03654.hp1
NA18522.hp1
NA18612.hp1
NA18943.hp1
NA18944.hp1
NA18966.hp1
NA18986.hp1
NA18990.hp1
NA19000.hp1
NA19004.hp1
NA19012.hp1
NA19043.hp1
NA19055.hp1
NA19070.hp1
NA19076.hp1
NA19086.hp1
NA19091.hp1
NA19240.hp1
NA19240.hp2
NA20300.hp2
 intron_variant MODIFIER c.2693-11619G>C
c.2693-11619G>C
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 20/21 chrX 21637212
chrX:21637841 G
G
 T
T
 1 a0001c0001t0015g0038
a0001c0001t0015g0038
 1 HG03688.hp1
HG03688.hp1
 intron_variant MODIFIER c.2693-10990G>T
c.2693-10990G>T
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 20/21 chrX 21637841
chrX:21638335 A
A
 C
C
 3 a0001c0001t0020g0141
a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0001t0020g0141
a0001c0003t0014g0147
a0001c0003t0014g0149
 3 HG01243.hp1
HG02615.hp1
HG03471.hp1
HG01243.hp1
HG02615.hp1
HG03471.hp1
 intron_variant MODIFIER c.2693-10496A>C
c.2693-10496A>C
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 20/21 chrX 21638335
chrX:21638368 T
T
 A
A
 1 a0001c0001t0002g0111
a0001c0001t0002g0111
 1 HG00741.hp2
HG00741.hp2
 intron_variant MODIFIER c.2693-10463T>A
c.2693-10463T>A
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 20/21 chrX 21638368
chrX:21638896 C
C
 A
A
 1 a0001c0001t0007g0140
a0001c0001t0007g0140
 1 HG02922.hp1
HG02922.hp1
 intron_variant MODIFIER c.2693-9935C>A
c.2693-9935C>A
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 20/21 chrX 21638896
chrX:21639152 A
A
 G
G
 1 a0001c0001t0006g0160
a0001c0001t0006g0160
 1 HG02615.hp2
HG02615.hp2
 intron_variant MODIFIER c.2693-9679A>G
c.2693-9679A>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 20/21 chrX 21639152
chrX:21639259 T
T
 C
C
 1 a0001c0007t0036g0026
a0001c0007t0036g0026
 1 HG01081.hp1
HG01081.hp1
 intron_variant MODIFIER c.2693-9572T>C
c.2693-9572T>C
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 20/21 chrX 21639259
chrX:21639374 C
C
 T
T
 1 a0001c0001t0019g0014
a0001c0001t0019g0014
 1 HG01884.hp2
HG01884.hp2
 intron_variant MODIFIER c.2693-9457C>T
c.2693-9457C>T
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 20/21 chrX 21639374
chrX:21639969 G
G
 A
A
 1 a0001c0001t0015g0038
a0001c0001t0015g0038
 1 HG03688.hp1
HG03688.hp1
 intron_variant MODIFIER c.2693-8862G>A
c.2693-8862G>A
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 20/21 chrX 21639969
chrX:21639976 A
A
 G
G
 4 a0001c0001t0007g0140
a0001c0001t0010g0152
a0001c0001t0010g0153
others(1): Show 
a0001c0001t0007g0140
a0001c0001t0010g0152
a0001c0001t0010g0153
a0001c0001t0010g0162
 4 HG02922.hp1
HG03209.hp1
HG03225.hp1
others(1): Show 
HG02922.hp1
HG03209.hp1
HG03225.hp1
NA19240.hp2
 intron_variant MODIFIER c.2693-8855A>G
c.2693-8855A>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 20/21 chrX 21639976
chrX:21640638 A
A
 G
G
 1 a0001c0001t0002g0111
a0001c0001t0002g0111
 1 HG00741.hp2
HG00741.hp2
 intron_variant MODIFIER c.2693-8193A>G
c.2693-8193A>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 20/21 chrX 21640638
chrX:21640652 T
T
 C
C
 5 a0001c0001t0007g0140
a0001c0001t0010g0152
a0001c0001t0010g0153
others(2): Show 
a0001c0001t0007g0140
a0001c0001t0010g0152
a0001c0001t0010g0153
a0001c0001t0010g0162
a0001c0001t0017g0018
 5 HG01071.hp2
HG02922.hp1
HG03209.hp1
others(2): Show 
HG01071.hp2
HG02922.hp1
HG03209.hp1
HG03225.hp1
NA19240.hp2
 intron_variant MODIFIER c.2693-8179T>C
c.2693-8179T>C
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 20/21 chrX 21640652
chrX:21642148 A
A
 C
C
 1 a0001c0001t0031g0065
a0001c0001t0031g0065
 1 HG02040.hp1
HG02040.hp1
 intron_variant MODIFIER c.2693-6683A>C
c.2693-6683A>C
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 20/21 chrX 21642148
chrX:21642170 C
C
 A
A
 5 a0001c0001t0006g0155
a0001c0001t0006g0160
a0001c0001t0006g0161
others(2): Show 
a0001c0001t0006g0155
a0001c0001t0006g0160
a0001c0001t0006g0161
a0001c0001t0043g0007
a0003c0004t0006g0154
 5 HG01884.hp1
HG02615.hp2
HG02922.hp2
others(2): Show 
HG01884.hp1
HG02615.hp2
HG02922.hp2
HG02976.hp1
HG03491.hp2
 intron_variant MODIFIER c.2693-6661C>A
c.2693-6661C>A
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 20/21 chrX 21642170
chrX:21642182 C
C
 T
T
 28 a0001c0001t0002g0019
a0001c0001t0006g0155
a0001c0001t0006g0157
others(25): Show 
a0001c0001t0002g0019
a0001c0001t0006g0155
a0001c0001t0006g0157
a0001c0001t0006g0159
a0001c0001t0006g0160
a0001c0001t0006g0161
a0001c0001t0007g0140
a0001c0001t0009g0010
a0001c0001t0009g0011
a0001c0001t0009g0012
a0001c0001t0009g0013
a0001c0001t0010g0152
a0001c0001t0010g0153
a0001c0001t0010g0162
a0001c0001t0011g0016
a0001c0001t0011g0017
a0001c0001t0011g0138
a0001c0001t0019g0014
a0001c0001t0022g0033
a0001c0001t0027g0034
a0001c0001t0041g0009
a0001c0001t0042g0008
a0001c0001t0043g0007
a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0006t0028g0059
a0001c0007t0036g0026
a0003c0004t0006g0154
 28 HG01081.hp1
HG01106.hp1
HG01884.hp1
others(25): Show 
HG01081.hp1
HG01106.hp1
HG01884.hp1
HG01884.hp2
HG02055.hp1
HG02280.hp2
HG02486.hp1
HG02572.hp1
HG02615.hp1
HG02615.hp2
HG02647.hp1
HG02809.hp1
HG02886.hp1
HG02922.hp1
HG02922.hp2
HG02976.hp1
HG03041.hp1
HG03098.hp1
HG03130.hp1
HG03209.hp1
HG03225.hp1
HG03471.hp1
HG03486.hp1
HG03491.hp2
HG03516.hp2
HG03579.hp1
NA18522.hp1
NA19240.hp2
 intron_variant MODIFIER c.2693-6649C>T
c.2693-6649C>T
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 20/21 chrX 21642182
chrX:21643056 G
G
 GT
GT
 1 a0001c0001t0001g0048
a0001c0001t0001g0048
 1 HG00673.hp1
HG00673.hp1
 intron_variant MODIFIER c.2693-5765dupT
c.2693-5765dupT
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 20/21 INFO_REALIGN_3_PRIME chrX 21643056
chrX:21643079 T
T
 C
C
 1 a0001c0001t0020g0141
a0001c0001t0020g0141
 1 HG01243.hp1
HG01243.hp1
 intron_variant MODIFIER c.2693-5752T>C
c.2693-5752T>C
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 20/21 chrX 21643079
chrX:21643532 A
A
 T
T
 1 a0001c0001t0001g0048
a0001c0001t0001g0048
 1 HG00673.hp1
HG00673.hp1
 intron_variant MODIFIER c.2693-5299A>T
c.2693-5299A>T
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 20/21 chrX 21643532
chrX:21643628 G
G
 GT
GT
 1 a0001c0001t0020g0141
a0001c0001t0020g0141
 1 HG01243.hp1
HG01243.hp1
 intron_variant MODIFIER c.2693-5197dupT
c.2693-5197dupT
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 20/21 INFO_REALIGN_3_PRIME chrX 21643628
chrX:21643684 T
T
 C
C
 1 a0001c0001t0029g0023
a0001c0001t0029g0023
 1 HG01099.hp1
HG01099.hp1
 intron_variant MODIFIER c.2693-5147T>C
c.2693-5147T>C
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 20/21 chrX 21643684
chrX:21644379 A
A
 G
G
 1 a0001c0001t0001g0074
a0001c0001t0001g0074
 1 NA18983.hp1
NA18983.hp1
 intron_variant MODIFIER c.2693-4452A>G
c.2693-4452A>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 20/21 chrX 21644379
chrX:21644665 T
T
 A
A
 1 a0001c0003t0026g0148
a0001c0003t0026g0148
 1 HG02965.hp1
HG02965.hp1
 intron_variant MODIFIER c.2693-4166T>A
c.2693-4166T>A
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 20/21 chrX 21644665
chrX:21644850 T
T
 C
C
 2 a0001c0001t0001g0083
a0001c0001t0016g0085
a0001c0001t0001g0083
a0001c0001t0016g0085
 2 HG02300.hp1
NA20300.hp1
HG02300.hp1
NA20300.hp1
 intron_variant MODIFIER c.2693-3981T>C
c.2693-3981T>C
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 20/21 chrX 21644850
chrX:21645851 T
T
 C
C
 4 a0001c0001t0011g0016
a0001c0001t0011g0017
a0001c0001t0011g0138
others(1): Show 
a0001c0001t0011g0016
a0001c0001t0011g0017
a0001c0001t0011g0138
a0001c0001t0012g0025
 4 HG03041.hp1
HG03486.hp2
HG03579.hp1
others(1): Show 
HG03041.hp1
HG03486.hp2
HG03579.hp1
NA18522.hp1
 intron_variant MODIFIER c.2693-2980T>C
c.2693-2980T>C
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 20/21 chrX 21645851
chrX:21645863 C
C
 A
A
 1 a0001c0001t0012g0045
a0001c0001t0012g0045
 1 HG02145.hp1
HG02145.hp1
 intron_variant MODIFIER c.2693-2968C>A
c.2693-2968C>A
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 20/21 chrX 21645863
chrX:21646274 A
A
 G
G
 2 a0001c0001t0012g0045
a0001c0001t0012g0142
a0001c0001t0012g0045
a0001c0001t0012g0142
 2 HG02145.hp1
HG03139.hp1
HG02145.hp1
HG03139.hp1
 intron_variant MODIFIER c.2693-2557A>G
c.2693-2557A>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 20/21 chrX 21646274
chrX:21646932 G
G
 C
C
 15 a0001c0001t0006g0155
a0001c0001t0006g0157
a0001c0001t0006g0159
others(12): Show 
a0001c0001t0006g0155
a0001c0001t0006g0157
a0001c0001t0006g0159
a0001c0001t0006g0160
a0001c0001t0006g0161
a0001c0001t0007g0140
a0001c0001t0010g0152
a0001c0001t0010g0153
a0001c0001t0010g0162
a0001c0001t0017g0018
a0001c0001t0017g0146
a0001c0001t0024g0156
a0001c0001t0042g0008
a0001c0006t0028g0059
a0003c0004t0006g0154
 15 HG01071.hp2
HG01109.hp1
HG01884.hp1
others(12): Show 
HG01071.hp2
HG01109.hp1
HG01884.hp1
HG02615.hp2
HG02647.hp1
HG02886.hp1
HG02922.hp1
HG02922.hp2
HG02976.hp1
HG03130.hp1
HG03209.hp1
HG03225.hp1
HG03516.hp2
NA19240.hp2
NA20300.hp2
 intron_variant MODIFIER c.2693-1899G>C
c.2693-1899G>C
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 20/21 chrX 21646932
chrX:21647077 C
C
 T
T
 1 a0001c0007t0036g0026
a0001c0007t0036g0026
 1 HG01081.hp1
HG01081.hp1
 intron_variant MODIFIER c.2693-1754C>T
c.2693-1754C>T
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 20/21 chrX 21647077
chrX:21647148 T
T
 C
C
 1 a0001c0001t0003g0031
a0001c0001t0003g0031
 1 HG02976.hp2
HG02976.hp2
 intron_variant MODIFIER c.2693-1683T>C
c.2693-1683T>C
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 20/21 chrX 21647148
chrX:21647150 T
T
 G
G
 13 a0001c0001t0006g0155
a0001c0001t0006g0157
a0001c0001t0006g0159
others(10): Show 
a0001c0001t0006g0155
a0001c0001t0006g0157
a0001c0001t0006g0159
a0001c0001t0006g0160
a0001c0001t0006g0161
a0001c0001t0010g0152
a0001c0001t0010g0153
a0001c0001t0010g0162
a0001c0001t0017g0146
a0001c0001t0024g0156
a0001c0001t0042g0008
a0001c0006t0028g0059
a0003c0004t0006g0154
 13 HG01109.hp1
HG01884.hp1
HG02615.hp2
others(10): Show 
HG01109.hp1
HG01884.hp1
HG02615.hp2
HG02647.hp1
HG02886.hp1
HG02922.hp2
HG02976.hp1
HG03130.hp1
HG03209.hp1
HG03225.hp1
HG03516.hp2
NA19240.hp2
NA20300.hp2
 intron_variant MODIFIER c.2693-1681T>G
c.2693-1681T>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 20/21 chrX 21647150
chrX:21647753 CT
CT
 C
C
 1 a0001c0001t0002g0125
a0001c0001t0002g0125
 1 NA19091.hp1
NA19091.hp1
 intron_variant MODIFIER c.2693-1071delT
c.2693-1071delT
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 20/21 INFO_REALIGN_3_PRIME chrX 21647753
chrX:21647921 T
T
 C
C
 1 a0001c0001t0006g0160
a0001c0001t0006g0160
 1 HG02615.hp2
HG02615.hp2
 intron_variant MODIFIER c.2693-910T>C
c.2693-910T>C
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 20/21 chrX 21647921
chrX:21647922 C
C
 T
T
 1 a0001c0001t0001g0001
a0001c0001t0001g0001
 1 NA19068.hp1
NA19068.hp1
 intron_variant MODIFIER c.2693-909C>T
c.2693-909C>T
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 20/21 chrX 21647922
chrX:21648069 A
A
 G
G
 1 a0001c0002t0001g0042
a0001c0002t0001g0042
 1 HG01934.hp1
HG01934.hp1
 intron_variant MODIFIER c.2693-762A>G
c.2693-762A>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 20/21 chrX 21648069
chrX:21648386 A
A
 G
G
 4 a0001c0001t0002g0004
a0001c0001t0003g0031
a0001c0001t0008g0005
others(1): Show 
a0001c0001t0002g0004
a0001c0001t0003g0031
a0001c0001t0008g0005
a0001c0002t0007g0040
 4 HG01069.hp1
HG01071.hp1
HG02027.hp1
others(1): Show 
HG01069.hp1
HG01071.hp1
HG02027.hp1
HG02976.hp2
 intron_variant MODIFIER c.2693-445A>G
c.2693-445A>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 20/21 chrX 21648386
chrX:21648395 C
C
 T
T
 1 a0001c0001t0001g0048
a0001c0001t0001g0048
 1 HG00673.hp1
HG00673.hp1
 intron_variant MODIFIER c.2693-436C>T
c.2693-436C>T
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 20/21 chrX 21648395
chrX:21648616 A
A
 G
G
 1 a0001c0001t0001g0076
a0001c0001t0001g0076
 1 NA18982.hp1
NA18982.hp1
 intron_variant MODIFIER c.2693-215A>G
c.2693-215A>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 20/21 chrX 21648616
chrX:21648770 T
T
 TTC
TTC
 1 a0001c0001t0001g0051
a0001c0001t0001g0051
 1 HG01074.hp1
HG01074.hp1
 intron_variant MODIFIER c.2693-41_2693-40dup
others(2): Show 
c.2693-41_2693-40dupCT
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 20/21 INFO_REALIGN_3_PRIME chrX 21648770
chrX:21648770 T
T
 TTCTC
TTCTC
 1 a0001c0001t0042g0008
a0001c0001t0042g0008
 1 HG02647.hp1
HG02647.hp1
 intron_variant MODIFIER c.2693-43_2693-40dup
others(4): Show 
c.2693-43_2693-40dupCTCT
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 20/21 INFO_REALIGN_3_PRIME chrX 21648770
chrX:21648788 C
C
 T
T
 1 a0001c0002t0007g0041
a0001c0002t0007g0041
 1 NA18977.hp1
NA18977.hp1
 intron_variant MODIFIER c.2693-43C>T
c.2693-43C>T
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 20/21 chrX 21648788
chrX:21648791 TTTC
TTTC
 T
T
 1 a0001c0002t0007g0041
a0001c0002t0007g0041
 1 NA18977.hp1
NA18977.hp1
 intron_variant MODIFIER c.2693-37_2693-35del
others(3): Show 
c.2693-37_2693-35delCTT
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 20/21 INFO_REALIGN_3_PRIME chrX 21648791
chrX:21648792 T
T
 C
C
 2 a0001c0001t0011g0017
a0001c0001t0012g0025
a0001c0001t0011g0017
a0001c0001t0012g0025
 2 HG03486.hp2
HG03579.hp1
HG03486.hp2
HG03579.hp1
 intron_variant MODIFIER c.2693-39T>C
c.2693-39T>C
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 20/21 chrX 21648792
chrX:21648794 C
C
 CT
CT
 99 a0001c0001t0001g0001
a0001c0001t0001g0035
a0001c0001t0001g0036
others(96): Show 
a0001c0001t0001g0001
a0001c0001t0001g0035
a0001c0001t0001g0036
a0001c0001t0001g0037
a0001c0001t0001g0048
a0001c0001t0001g0051
a0001c0001t0001g0053
a0001c0001t0001g0058
a0001c0001t0001g0060
a0001c0001t0001g0062
a0001c0001t0001g0067
a0001c0001t0001g0068
a0001c0001t0001g0069
a0001c0001t0001g0071
a0001c0001t0001g0074
a0001c0001t0001g0075
a0001c0001t0001g0076
a0001c0001t0001g0077
a0001c0001t0001g0078
a0001c0001t0001g0080
a0001c0001t0001g0082
a0001c0001t0001g0083
a0001c0001t0001g0084
a0001c0001t0001g0087
a0001c0001t0001g0089
a0001c0001t0001g0090
a0001c0001t0001g0093
a0001c0001t0001g0094
a0001c0001t0001g0096
a0001c0001t0001g0097
a0001c0001t0001g0102
a0001c0001t0001g0103
a0001c0001t0001g0109
a0001c0001t0001g0128
a0001c0001t0001g0131
a0001c0001t0001g0134
a0001c0001t0001g0137
a0001c0001t0001g0145
a0001c0001t0002g0043
a0001c0001t0002g0111
a0001c0001t0002g0113
a0001c0001t0002g0114
a0001c0001t0003g0024
a0001c0001t0003g0029
a0001c0001t0003g0044
a0001c0001t0003g0070
a0001c0001t0003g0101
a0001c0001t0003g0116
a0001c0001t0003g0133
a0001c0001t0003g0136
a0001c0001t0003g0151
a0001c0001t0004g0055
a0001c0001t0004g0056
a0001c0001t0004g0057
a0001c0001t0004g0064
a0001c0001t0004g0117
a0001c0001t0004g0129
a0001c0001t0004g0132
a0001c0001t0005g0063
a0001c0001t0005g0072
a0001c0001t0005g0079
a0001c0001t0005g0095
a0001c0001t0005g0099
a0001c0001t0006g0155
a0001c0001t0006g0157
a0001c0001t0006g0159
a0001c0001t0006g0160
a0001c0001t0006g0161
a0001c0001t0007g0022
a0001c0001t0007g0127
a0001c0001t0010g0152
a0001c0001t0010g0153
a0001c0001t0010g0162
a0001c0001t0013g0100
a0001c0001t0015g0038
a0001c0001t0015g0098
a0001c0001t0016g0032
a0001c0001t0016g0085
a0001c0001t0017g0018
a0001c0001t0017g0146
a0001c0001t0018g0123
a0001c0001t0021g0088
a0001c0001t0025g0130
a0001c0001t0029g0023
a0001c0001t0030g0086
a0001c0001t0031g0065
a0001c0001t0032g0163
a0001c0001t0033g0002
a0001c0001t0035g0054
a0001c0002t0001g0042
a0001c0002t0001g0104
a0001c0002t0001g0105
a0001c0002t0001g0108
a0001c0002t0005g0106
a0001c0002t0007g0040
a0001c0006t0028g0059
a0001c0007t0036g0026
a0002c0005t0003g0030
a0003c0004t0006g0154
 99 HG00140.hp1
HG00280.hp1
HG00609.hp1
others(96): Show 
HG00140.hp1
HG00280.hp1
HG00609.hp1
HG00673.hp1
HG00735.hp1
HG00735.hp2
HG00738.hp1
HG00741.hp1
HG00741.hp2
HG01071.hp2
HG01074.hp1
HG01081.hp1
HG01081.hp2
HG01099.hp1
HG01109.hp1
HG01255.hp1
HG01258.hp1
HG01261.hp1
HG01358.hp1
HG01884.hp1
HG01928.hp1
HG01934.hp1
HG01943.hp1
HG01952.hp1
HG02015.hp1
HG02027.hp1
HG02040.hp1
HG02056.hp1
HG02071.hp1
HG02129.hp1
HG02132.hp1
HG02135.hp1
HG02280.hp1
HG02300.hp1
HG02602.hp1
HG02615.hp2
HG02698.hp1
HG02738.hp1
HG02809.hp2
HG02886.hp1
HG02886.hp2
HG02895.hp1
HG02922.hp2
HG02976.hp1
HG03017.hp1
HG03041.hp2
HG03130.hp1
HG03209.hp1
HG03225.hp1
HG03490.hp1
HG03491.hp1
HG03492.hp1
HG03516.hp2
HG03688.hp1
HG03710.hp1
HG03942.hp1
HG04115.hp1
HG04199.hp1
HG04228.hp1
NA18747.hp1
NA18945.hp1
NA18948.hp1
NA18952.hp1
NA18953.hp1
NA18955.hp1
NA18959.hp1
NA18960.hp1
NA18961.hp1
NA18962.hp1
NA18965.hp1
NA18967.hp1
NA18971.hp1
NA18982.hp1
NA18983.hp1
NA18988.hp1
NA18989.hp1
NA18994.hp1
NA18995.hp1
NA19005.hp1
NA19006.hp1
NA19009.hp1
NA19056.hp1
NA19058.hp1
NA19060.hp1
NA19062.hp1
NA19063.hp1
NA19066.hp1
NA19068.hp1
NA19072.hp1
NA19079.hp1
NA19082.hp1
NA19085.hp1
NA19088.hp1
NA19240.hp2
NA20300.hp1
NA20752.hp1
NA20805.hp1
NA20905.hp1
homoSapiens_chm13v2.hp1
 intron_variant MODIFIER c.2693-12dupT
c.2693-12dupT
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 20/21 INFO_REALIGN_3_PRIME chrX 21648794
chrX:21648794 C
C
 CTT
CTT
 12 a0001c0001t0001g0039
a0001c0001t0001g0052
a0001c0001t0001g0158
others(9): Show 
a0001c0001t0001g0039
a0001c0001t0001g0052
a0001c0001t0001g0158
a0001c0001t0004g0020
a0001c0001t0007g0140
a0001c0001t0009g0010
a0001c0001t0009g0011
a0001c0001t0009g0012
a0001c0001t0022g0033
a0001c0001t0034g0091
a0001c0001t0037g0092
a0001c0001t0043g0007
 12 HG00642.hp1
HG01192.hp1
HG02055.hp1
others(9): Show 
HG00642.hp1
HG01192.hp1
HG02055.hp1
HG02280.hp2
HG02572.hp1
HG02735.hp1
HG02809.hp1
HG02922.hp1
HG03491.hp2
HG03516.hp1
HG04204.hp1
NA19007.hp1
 intron_variant MODIFIER c.2693-13_2693-12dup
others(2): Show 
c.2693-13_2693-12dupTT
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 20/21 INFO_REALIGN_3_PRIME chrX 21648794
chrX:21648794 C
C
 CTTT
CTTT
 7 a0001c0001t0009g0013
a0001c0001t0011g0016
a0001c0001t0011g0138
others(4): Show 
a0001c0001t0009g0013
a0001c0001t0011g0016
a0001c0001t0011g0138
a0001c0001t0019g0014
a0001c0001t0023g0006
a0001c0001t0027g0034
a0001c0001t0041g0009
 7 HG01884.hp2
HG02486.hp1
HG03041.hp1
others(4): Show 
HG01884.hp2
HG02486.hp1
HG03041.hp1
HG03098.hp1
HG03486.hp1
HG03654.hp1
NA18522.hp1
 intron_variant MODIFIER c.2693-14_2693-12dup
others(3): Show 
c.2693-14_2693-12dupTTT
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 20/21 INFO_REALIGN_3_PRIME chrX 21648794
chrX:21648794 C
C
 CTTTCTT
CTTTCTT
 2 a0001c0001t0011g0017
a0001c0001t0012g0025
a0001c0001t0011g0017
a0001c0001t0012g0025
 2 HG03486.hp2
HG03579.hp1
HG03486.hp2
HG03579.hp1
 intron_variant MODIFIER c.2693-34_2693-33ins
others(6): Show 
c.2693-34_2693-33insCTTTTT
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 20/21 INFO_REALIGN_3_PRIME chrX 21648794
chrX:21648794 C
C
 T
T
 1 a0001c0001t0042g0008
a0001c0001t0042g0008
 1 HG02647.hp1
HG02647.hp1
 intron_variant MODIFIER c.2693-37C>T
c.2693-37C>T
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 20/21 chrX 21648794
chrX:21648794 CT
CT
 C
C
 1 a0001c0001t0003g0061
a0001c0001t0003g0061
 1 NA18970.hp1
NA18970.hp1
 intron_variant MODIFIER c.2693-12delT
c.2693-12delT
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 20/21 INFO_REALIGN_3_PRIME chrX 21648794
chrX:21649865 C
C
 T
T
 7 a0001c0001t0002g0046
a0001c0001t0002g0119
a0001c0001t0002g0120
others(4): Show 
a0001c0001t0002g0046
a0001c0001t0002g0119
a0001c0001t0002g0120
a0001c0001t0002g0121
a0001c0001t0002g0122
a0001c0001t0008g0143
a0001c0001t0039g0144
 7 HG02083.hp1
NA18612.hp1
NA18966.hp1
others(4): Show 
HG02083.hp1
NA18612.hp1
NA18966.hp1
NA18986.hp1
NA18990.hp1
NA19055.hp1
NA19070.hp1
 intron_variant MODIFIER c.2889+838C>T
c.2889+838C>T
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 21/21 chrX 21649865
chrX:21650278 G
G
 A
A
 31 a0001c0001t0006g0155
a0001c0001t0006g0157
a0001c0001t0006g0159
others(28): Show 
a0001c0001t0006g0155
a0001c0001t0006g0157
a0001c0001t0006g0159
a0001c0001t0006g0160
a0001c0001t0006g0161
a0001c0001t0007g0140
a0001c0001t0009g0010
a0001c0001t0009g0011
a0001c0001t0009g0012
a0001c0001t0009g0013
a0001c0001t0010g0152
a0001c0001t0010g0153
a0001c0001t0010g0162
a0001c0001t0011g0016
a0001c0001t0011g0017
a0001c0001t0011g0138
a0001c0001t0017g0018
a0001c0001t0017g0146
a0001c0001t0019g0014
a0001c0001t0022g0033
a0001c0001t0023g0006
a0001c0001t0024g0156
a0001c0001t0027g0034
a0001c0001t0041g0009
a0001c0001t0042g0008
a0001c0001t0043g0007
a0001c0003t0014g0147
a0001c0003t0014g0149
a0001c0006t0028g0059
a0001c0007t0036g0026
a0003c0004t0006g0154
 31 HG01071.hp2
HG01081.hp1
HG01109.hp1
others(28): Show 
HG01071.hp2
HG01081.hp1
HG01109.hp1
HG01884.hp1
HG01884.hp2
HG02055.hp1
HG02280.hp2
HG02486.hp1
HG02572.hp1
HG02615.hp1
HG02615.hp2
HG02647.hp1
HG02809.hp1
HG02886.hp1
HG02922.hp1
HG02922.hp2
HG02976.hp1
HG03041.hp1
HG03098.hp1
HG03130.hp1
HG03209.hp1
HG03225.hp1
HG03471.hp1
HG03486.hp1
HG03491.hp2
HG03516.hp2
HG03579.hp1
HG03654.hp1
NA18522.hp1
NA19240.hp2
NA20300.hp2
 intron_variant MODIFIER c.2889+1251G>A
c.2889+1251G>A
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 21/21 chrX 21650278
chrX:21650280 A
A
 G
G
 1 a0001c0001t0021g0088
a0001c0001t0021g0088
 1 NA19060.hp1
NA19060.hp1
 intron_variant MODIFIER c.2889+1253A>G
c.2889+1253A>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 21/21 chrX 21650280
chrX:21650340 C
C
 T
T
 1 a0001c0001t0007g0140
a0001c0001t0007g0140
 1 HG02922.hp1
HG02922.hp1
 intron_variant MODIFIER c.2889+1313C>T
c.2889+1313C>T
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 21/21 chrX 21650340
chrX:21650425 G
G
 A
A
 1 a0001c0001t0006g0160
a0001c0001t0006g0160
 1 HG02615.hp2
HG02615.hp2
 intron_variant MODIFIER c.2889+1398G>A
c.2889+1398G>A
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 21/21 chrX 21650425
chrX:21650695 T
T
 G
G
 15 a0001c0001t0006g0155
a0001c0001t0006g0157
a0001c0001t0006g0159
others(12): Show 
a0001c0001t0006g0155
a0001c0001t0006g0157
a0001c0001t0006g0159
a0001c0001t0006g0160
a0001c0001t0006g0161
a0001c0001t0010g0152
a0001c0001t0010g0153
a0001c0001t0010g0162
a0001c0001t0017g0018
a0001c0001t0017g0146
a0001c0001t0019g0014
a0001c0001t0024g0156
a0001c0001t0027g0034
a0001c0006t0028g0059
a0003c0004t0006g0154
 15 HG01071.hp2
HG01109.hp1
HG01884.hp1
others(12): Show 
HG01071.hp2
HG01109.hp1
HG01884.hp1
HG01884.hp2
HG02486.hp1
HG02615.hp2
HG02886.hp1
HG02922.hp2
HG02976.hp1
HG03130.hp1
HG03209.hp1
HG03225.hp1
HG03516.hp2
NA19240.hp2
NA20300.hp2
 intron_variant MODIFIER c.2890-1611T>G
c.2890-1611T>G
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 21/21 chrX 21650695
chrX:21650724 G
G
 C
C
 1 a0001c0001t0002g0120
a0001c0001t0002g0120
 1 NA18990.hp1
NA18990.hp1
 intron_variant MODIFIER c.2890-1582G>C
c.2890-1582G>C
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 21/21 chrX 21650724
chrX:21651166 T
T
 C
C
 1 a0001c0001t0009g0013
a0001c0001t0009g0013
 1 HG03486.hp1
HG03486.hp1
 intron_variant MODIFIER c.2890-1140T>C
c.2890-1140T>C
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 21/21 chrX 21651166
chrX:21651461 C
C
 A
A
 1 a0001c0001t0030g0086
a0001c0001t0030g0086
 1 HG04199.hp1
HG04199.hp1
 intron_variant MODIFIER c.2890-845C>A
c.2890-845C>A
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 21/21 chrX 21651461
chrX:21652095 G
G
 C
C
 1 a0001c0003t0026g0148
a0001c0003t0026g0148
 1 HG02965.hp1
HG02965.hp1
 intron_variant MODIFIER c.2890-211G>C
c.2890-211G>C
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 21/21 chrX 21652095
chrX:21652272 C
C
 T
T
 1 a0001c0001t0011g0017
a0001c0001t0011g0017
 1 HG03579.hp1
HG03579.hp1
 intron_variant MODIFIER c.2890-34C>T
c.2890-34C>T
CNKSR2 ENSG00000149970.16 transcript ENST00000379510.5 protein_coding 21/21 chrX 21652272

  • GeneCards
  • OpenTarget
  • The Human Protein Atlas
  • Gnomad v4.1.0
  • PhewebJP (Japan)
  • UKB-TOPMed (UMich) (UK and US)
  • FinnGen r11 (Finland)
  • KoGES (Korean)
  • Mouse Phenotype
  • Zebra Phenotype
  • TogoVar

  • DNA
  • Satellite
  • All Snps 1.4.2
  • RC
  • snRNA
  • SINE
  • GC %
  • Simple_repeat
  • RNA
  • Retroposon
  • Unknown
  • Low_complexity
  • LINE
  • scRNA
  • CpG Islands
  • Phastcons (20 way)
  • srpRNA
  • Common Snps 1.4.2
  • rRNA
  • LTR
  • tRNA

  • Axiom Genome-Wide Array (Japonica Array V1)
  • Axiom Genome-Wide Array (Japonica Array V2)
  • Axiom Genome-Wide ASI Array V1 (ASI V1)
​

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