Joint Open Genome and Omics Platform (JoGo)

Search by Genic region

geneid	6496
ensemblid	ENSG00000138083.5
hgncid	10889
symbol	SIX3
name	SIX homeobox 3
refseq_nuc	NM_005413.4
refseq_prot	NP_005404.1
ensembl_nuc	ENST00000260653.5
ensembl_prot	ENSP00000260653.3
mane_status	MANE Select
chr	chr2
start	44941702
end	44946071
strand	+
ver	v1.2
region	chr2:44941702-44946071
region5000	chr2:44936702-44951071
regionname0	SIX3_chr2_44941702_44946071
regionname5000	SIX3_chr2_44936702_44951071

ahapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	alen	total	AFR	AMR	EAS	EUR	SAS	JPT	regionname	genename	aa	chr	start	end
a0001	1/1	332	444	99	79	202	16	46	158	SIX3_chr2_44936702_44951071	SIX3	copy fasta	chr2	44936702	44951071
a0002	0/0	332	1	0	1	0	0	0	0	SIX3_chr2_44936702_44951071	SIX3	copy fasta	chr2	44936702	44951071
a0003	0/0	332	1	0	0	1	0	0	1	SIX3_chr2_44936702_44951071	SIX3	copy fasta	chr2	44936702	44951071
a0004	0/0	332	1	1	0	0	0	0	0	SIX3_chr2_44936702_44951071	SIX3	copy fasta	chr2	44936702	44951071
a0005	0/0	332	1	0	0	1	0	0	1	SIX3_chr2_44936702_44951071	SIX3	copy fasta	chr2	44936702	44951071

chapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	clen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	cseq	chr	start	end
c0001	0/1	999	403	91	65	192	15	39	SIX3_chr2_44936702_44951071	SIX3	copy fasta	chr2	44936702	44951071
c0002	0/0	999	15	1	4	7	1	2	SIX3_chr2_44936702_44951071	SIX3	copy fasta	chr2	44936702	44951071
c0003	1/0	999	14	0	6	3	0	4	SIX3_chr2_44936702_44951071	SIX3	copy fasta	chr2	44936702	44951071
c0004	0/0	999	6	4	2	0	0	0	SIX3_chr2_44936702_44951071	SIX3	copy fasta	chr2	44936702	44951071
c0005	0/0	999	4	3	0	0	0	1	SIX3_chr2_44936702_44951071	SIX3	copy fasta	chr2	44936702	44951071
c0006	0/0	999	1	0	1	0	0	0	SIX3_chr2_44936702_44951071	SIX3	copy fasta	chr2	44936702	44951071
c0007	0/0	999	1	0	0	1	0	0	SIX3_chr2_44936702_44951071	SIX3	copy fasta	chr2	44936702	44951071
c0008	0/0	999	1	0	0	1	0	0	SIX3_chr2_44936702_44951071	SIX3	copy fasta	chr2	44936702	44951071
c0009	0/0	999	1	0	1	0	0	0	SIX3_chr2_44936702_44951071	SIX3	copy fasta	chr2	44936702	44951071
c0010	0/0	999	1	1	0	0	0	0	SIX3_chr2_44936702_44951071	SIX3	copy fasta	chr2	44936702	44951071
c0011	0/0	999	1	0	1	0	0	0	SIX3_chr2_44936702_44951071	SIX3	copy fasta	chr2	44936702	44951071

thapid	grch38 chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	tlen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	tseq	chr	start	end
t0001	0/0	1711	90	13	12	48	7	10	SIX3_chr2_44936702_44951071	SIX3	copy fasta	chr2	44936702	44951071
t0002	0/0	1712	74	7	10	45	2	10	SIX3_chr2_44936702_44951071	SIX3	copy fasta	chr2	44936702	44951071
t0003	0/0	1710	33	2	1	26	0	4	SIX3_chr2_44936702_44951071	SIX3	copy fasta	chr2	44936702	44951071
t0004	0/0	1711	23	2	4	13	0	4	SIX3_chr2_44936702_44951071	SIX3	copy fasta	chr2	44936702	44951071
t0005	1/0	1715	20	2	13	3	1	0	SIX3_chr2_44936702_44951071	SIX3	copy fasta	chr2	44936702	44951071
t0006	0/0	1708	20	7	5	5	1	2	SIX3_chr2_44936702_44951071	SIX3	copy fasta	chr2	44936702	44951071
t0007	0/0	1710	15	8	1	4	0	2	SIX3_chr2_44936702_44951071	SIX3	copy fasta	chr2	44936702	44951071
t0008	0/0	1714	13	1	4	4	4	0	SIX3_chr2_44936702_44951071	SIX3	copy fasta	chr2	44936702	44951071
t0009	0/0	1712	12	1	3	5	0	3	SIX3_chr2_44936702_44951071	SIX3	copy fasta	chr2	44936702	44951071
t0010	0/0	1711	12	8	2	2	0	0	SIX3_chr2_44936702_44951071	SIX3	copy fasta	chr2	44936702	44951071
t0011	0/0	1714	9	0	5	2	0	2	SIX3_chr2_44936702_44951071	SIX3	copy fasta	chr2	44936702	44951071
t0012	0/0	1711	8	7	1	0	0	0	SIX3_chr2_44936702_44951071	SIX3	copy fasta	chr2	44936702	44951071
t0013	0/0	1712	7	1	5	1	0	0	SIX3_chr2_44936702_44951071	SIX3	copy fasta	chr2	44936702	44951071
t0014	0/0	1711	6	3	0	3	0	0	SIX3_chr2_44936702_44951071	SIX3	copy fasta	chr2	44936702	44951071
t0015	0/0	1713	5	0	2	3	0	0	SIX3_chr2_44936702_44951071	SIX3	copy fasta	chr2	44936702	44951071
t0016	0/0	1713	5	0	0	1	1	3	SIX3_chr2_44936702_44951071	SIX3	copy fasta	chr2	44936702	44951071
t0017	0/0	1711	5	0	5	0	0	0	SIX3_chr2_44936702_44951071	SIX3	copy fasta	chr2	44936702	44951071
t0018	0/0	1712	5	4	1	0	0	0	SIX3_chr2_44936702_44951071	SIX3	copy fasta	chr2	44936702	44951071
t0019	0/0	1711	4	4	0	0	0	0	SIX3_chr2_44936702_44951071	SIX3	copy fasta	chr2	44936702	44951071
t0020	0/0	1711	4	3	1	0	0	0	SIX3_chr2_44936702_44951071	SIX3	copy fasta	chr2	44936702	44951071
t0021	0/0	1712	4	3	0	1	0	0	SIX3_chr2_44936702_44951071	SIX3	copy fasta	chr2	44936702	44951071
t0022	0/1	1711	4	0	0	3	0	0	SIX3_chr2_44936702_44951071	SIX3	copy fasta	chr2	44936702	44951071
t0023	0/0	1711	4	0	0	4	0	0	SIX3_chr2_44936702_44951071	SIX3	copy fasta	chr2	44936702	44951071
t0024	0/0	1710	4	0	0	4	0	0	SIX3_chr2_44936702_44951071	SIX3	copy fasta	chr2	44936702	44951071
t0025	0/0	1709	4	0	0	4	0	0	SIX3_chr2_44936702_44951071	SIX3	copy fasta	chr2	44936702	44951071
t0026	0/0	1713	3	2	0	1	0	0	SIX3_chr2_44936702_44951071	SIX3	copy fasta	chr2	44936702	44951071
t0027	0/0	1710	3	0	0	3	0	0	SIX3_chr2_44936702_44951071	SIX3	copy fasta	chr2	44936702	44951071
t0028	0/0	1710	3	3	0	0	0	0	SIX3_chr2_44936702_44951071	SIX3	copy fasta	chr2	44936702	44951071
t0029	0/0	1708	3	3	0	0	0	0	SIX3_chr2_44936702_44951071	SIX3	copy fasta	chr2	44936702	44951071
t0030	0/0	1712	2	0	0	2	0	0	SIX3_chr2_44936702_44951071	SIX3	copy fasta	chr2	44936702	44951071
t0031	0/0	1712	2	0	0	2	0	0	SIX3_chr2_44936702_44951071	SIX3	copy fasta	chr2	44936702	44951071
t0032	0/0	1715	2	0	0	0	0	2	SIX3_chr2_44936702_44951071	SIX3	copy fasta	chr2	44936702	44951071
t0033	0/0	1709	2	1	0	0	0	1	SIX3_chr2_44936702_44951071	SIX3	copy fasta	chr2	44936702	44951071
t0034	0/0	1707	2	1	0	1	0	0	SIX3_chr2_44936702_44951071	SIX3	copy fasta	chr2	44936702	44951071
t0035	0/0	1706	2	2	0	0	0	0	SIX3_chr2_44936702_44951071	SIX3	copy fasta	chr2	44936702	44951071
t0036	0/0	1711	1	0	0	1	0	0	SIX3_chr2_44936702_44951071	SIX3	copy fasta	chr2	44936702	44951071
t0037	0/0	1711	1	0	0	1	0	0	SIX3_chr2_44936702_44951071	SIX3	copy fasta	chr2	44936702	44951071
t0038	0/0	1716	1	0	0	1	0	0	SIX3_chr2_44936702_44951071	SIX3	copy fasta	chr2	44936702	44951071
t0039	0/0	1714	1	0	0	0	0	1	SIX3_chr2_44936702_44951071	SIX3	copy fasta	chr2	44936702	44951071
t0040	0/0	1713	1	0	0	1	0	0	SIX3_chr2_44936702_44951071	SIX3	copy fasta	chr2	44936702	44951071
t0041	0/0	1713	1	0	0	1	0	0	SIX3_chr2_44936702_44951071	SIX3	copy fasta	chr2	44936702	44951071
t0042	0/0	1713	1	0	1	0	0	0	SIX3_chr2_44936702_44951071	SIX3	copy fasta	chr2	44936702	44951071
t0043	0/0	1712	1	0	1	0	0	0	SIX3_chr2_44936702_44951071	SIX3	copy fasta	chr2	44936702	44951071
t0044	0/0	1713	1	1	0	0	0	0	SIX3_chr2_44936702_44951071	SIX3	copy fasta	chr2	44936702	44951071
t0045	0/0	1711	1	0	0	1	0	0	SIX3_chr2_44936702_44951071	SIX3	copy fasta	chr2	44936702	44951071
t0046	0/0	1712	1	0	1	0	0	0	SIX3_chr2_44936702_44951071	SIX3	copy fasta	chr2	44936702	44951071
t0047	0/0	1711	1	0	0	1	0	0	SIX3_chr2_44936702_44951071	SIX3	copy fasta	chr2	44936702	44951071
t0048	0/0	1710	1	0	1	0	0	0	SIX3_chr2_44936702_44951071	SIX3	copy fasta	chr2	44936702	44951071
t0049	0/0	1710	1	0	0	0	0	1	SIX3_chr2_44936702_44951071	SIX3	copy fasta	chr2	44936702	44951071
t0050	0/0	1711	1	0	0	0	0	1	SIX3_chr2_44936702_44951071	SIX3	copy fasta	chr2	44936702	44951071
t0051	0/0	1710	1	1	0	0	0	0	SIX3_chr2_44936702_44951071	SIX3	copy fasta	chr2	44936702	44951071
t0052	0/0	1711	1	1	0	0	0	0	SIX3_chr2_44936702_44951071	SIX3	copy fasta	chr2	44936702	44951071
t0053	0/0	1711	1	0	0	1	0	0	SIX3_chr2_44936702_44951071	SIX3	copy fasta	chr2	44936702	44951071
t0054	0/0	1709	1	1	0	0	0	0	SIX3_chr2_44936702_44951071	SIX3	copy fasta	chr2	44936702	44951071
t0055	0/0	1710	1	0	0	1	0	0	SIX3_chr2_44936702_44951071	SIX3	copy fasta	chr2	44936702	44951071
t0056	0/0	1709	1	1	0	0	0	0	SIX3_chr2_44936702_44951071	SIX3	copy fasta	chr2	44936702	44951071
t0057	0/0	1697	1	0	0	1	0	0	SIX3_chr2_44936702_44951071	SIX3	copy fasta	chr2	44936702	44951071
t0058	0/0	1710	1	0	0	1	0	0	SIX3_chr2_44936702_44951071	SIX3	copy fasta	chr2	44936702	44951071
t0059	0/0	1713	1	0	1	0	0	0	SIX3_chr2_44936702_44951071	SIX3	copy fasta	chr2	44936702	44951071
t0060	0/0	1714	1	0	0	1	0	0	SIX3_chr2_44936702_44951071	SIX3	copy fasta	chr2	44936702	44951071
t0061	0/0	1715	1	0	0	1	0	0	SIX3_chr2_44936702_44951071	SIX3	copy fasta	chr2	44936702	44951071
t0062	0/0	1710	1	1	0	0	0	0	SIX3_chr2_44936702_44951071	SIX3	copy fasta	chr2	44936702	44951071
t0063	0/0	1709	1	1	0	0	0	0	SIX3_chr2_44936702_44951071	SIX3	copy fasta	chr2	44936702	44951071
t0064	0/0	1709	1	1	0	0	0	0	SIX3_chr2_44936702_44951071	SIX3	copy fasta	chr2	44936702	44951071
t0065	0/0	1708	1	1	0	0	0	0	SIX3_chr2_44936702_44951071	SIX3	copy fasta	chr2	44936702	44951071
t0066	0/0	1707	1	0	0	1	0	0	SIX3_chr2_44936702_44951071	SIX3	copy fasta	chr2	44936702	44951071
t0067	0/0	1705	1	1	0	0	0	0	SIX3_chr2_44936702_44951071	SIX3	copy fasta	chr2	44936702	44951071
t0068	0/0	1709	1	1	0	0	0	0	SIX3_chr2_44936702_44951071	SIX3	copy fasta	chr2	44936702	44951071
t0069	0/0	1709	1	1	0	0	0	0	SIX3_chr2_44936702_44951071	SIX3	copy fasta	chr2	44936702	44951071

ghapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	chr	start	end
g0001	0/0	169	32	30	82	7	18	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
g0002	0/0	106	21	19	53	2	11	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
g0003	1/1	101	19	19	48	6	7	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
g0004	0/0	34	19	5	7	1	2	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
g0005	0/0	13	0	6	3	0	4	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
g0006	0/0	6	0	0	6	0	0	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
g0007	0/0	4	3	1	0	0	0	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
g0008	0/0	4	3	0	0	0	1	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
g0009	0/0	2	2	0	0	0	0	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
g0010	0/0	1	0	0	0	0	1	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
g0011	0/0	1	0	0	1	0	0	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
g0012	0/0	1	1	0	0	0	0	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
g0013	0/0	1	0	0	0	0	1	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
g0014	0/0	1	0	0	0	0	1	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
g0015	0/0	1	0	0	1	0	0	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
g0016	0/0	1	0	0	1	0	0	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
g0017	0/0	1	0	0	1	0	0	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
g0018	0/0	1	0	0	1	0	0	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071

achapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	clen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	cseq	chr	start	end
a0001c0001	0/1	999	403	91	65	192	15	39	SIX3_chr2_44936702_44951071	SIX3	copy fasta	chr2	44936702	44951071
a0001c0002	0/0	999	15	1	4	7	1	2	SIX3_chr2_44936702_44951071	SIX3	copy fasta	chr2	44936702	44951071
a0001c0003	1/0	999	14	0	6	3	0	4	SIX3_chr2_44936702_44951071	SIX3	copy fasta	chr2	44936702	44951071
a0001c0004	0/0	999	6	4	2	0	0	0	SIX3_chr2_44936702_44951071	SIX3	copy fasta	chr2	44936702	44951071
a0001c0005	0/0	999	4	3	0	0	0	1	SIX3_chr2_44936702_44951071	SIX3	copy fasta	chr2	44936702	44951071
a0001c0006	0/0	999	1	0	1	0	0	0	SIX3_chr2_44936702_44951071	SIX3	copy fasta	chr2	44936702	44951071
a0001c0011	0/0	999	1	0	1	0	0	0	SIX3_chr2_44936702_44951071	SIX3	copy fasta	chr2	44936702	44951071
a0002c0009	0/0	999	1	0	1	0	0	0	SIX3_chr2_44936702_44951071	SIX3	copy fasta	chr2	44936702	44951071
a0003c0008	0/0	999	1	0	0	1	0	0	SIX3_chr2_44936702_44951071	SIX3	copy fasta	chr2	44936702	44951071
a0004c0010	0/0	999	1	1	0	0	0	0	SIX3_chr2_44936702_44951071	SIX3	copy fasta	chr2	44936702	44951071
a0005c0007	0/0	999	1	0	0	1	0	0	SIX3_chr2_44936702_44951071	SIX3	copy fasta	chr2	44936702	44951071

acthapid	grch38 chm13v2	tlen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	tseq	chr	start	end
a0001c0001t0001	0/0	2709	90	13	12	48	7	10	SIX3_chr2_44936702_44951071	SIX3	copy fasta	chr2	44936702	44951071
a0001c0001t0002	0/0	2710	70	7	7	44	2	10	SIX3_chr2_44936702_44951071	SIX3	copy fasta	chr2	44936702	44951071
a0001c0001t0003	0/0	2708	33	2	1	26	0	4	SIX3_chr2_44936702_44951071	SIX3	copy fasta	chr2	44936702	44951071
a0001c0001t0004	0/0	2709	23	2	4	13	0	4	SIX3_chr2_44936702_44951071	SIX3	copy fasta	chr2	44936702	44951071
a0001c0001t0005	0/0	2713	18	2	12	3	1	0	SIX3_chr2_44936702_44951071	SIX3	copy fasta	chr2	44936702	44951071
a0001c0001t0006	0/0	2706	6	6	0	0	0	0	SIX3_chr2_44936702_44951071	SIX3	copy fasta	chr2	44936702	44951071
a0001c0001t0007	0/0	2708	15	8	1	4	0	2	SIX3_chr2_44936702_44951071	SIX3	copy fasta	chr2	44936702	44951071
a0001c0001t0008	0/0	2712	13	1	4	4	4	0	SIX3_chr2_44936702_44951071	SIX3	copy fasta	chr2	44936702	44951071
a0001c0001t0009	0/0	2710	12	1	3	5	0	3	SIX3_chr2_44936702_44951071	SIX3	copy fasta	chr2	44936702	44951071
a0001c0001t0010	0/0	2709	12	8	2	2	0	0	SIX3_chr2_44936702_44951071	SIX3	copy fasta	chr2	44936702	44951071
a0001c0001t0012	0/0	2709	8	7	1	0	0	0	SIX3_chr2_44936702_44951071	SIX3	copy fasta	chr2	44936702	44951071
a0001c0001t0013	0/0	2710	7	1	5	1	0	0	SIX3_chr2_44936702_44951071	SIX3	copy fasta	chr2	44936702	44951071
a0001c0001t0014	0/0	2709	3	0	0	3	0	0	SIX3_chr2_44936702_44951071	SIX3	copy fasta	chr2	44936702	44951071
a0001c0001t0015	0/0	2711	5	0	2	3	0	0	SIX3_chr2_44936702_44951071	SIX3	copy fasta	chr2	44936702	44951071
a0001c0001t0016	0/0	2711	5	0	0	1	1	3	SIX3_chr2_44936702_44951071	SIX3	copy fasta	chr2	44936702	44951071
a0001c0001t0017	0/0	2709	5	0	5	0	0	0	SIX3_chr2_44936702_44951071	SIX3	copy fasta	chr2	44936702	44951071
a0001c0001t0018	0/0	2710	5	4	1	0	0	0	SIX3_chr2_44936702_44951071	SIX3	copy fasta	chr2	44936702	44951071
a0001c0001t0019	0/0	2709	4	4	0	0	0	0	SIX3_chr2_44936702_44951071	SIX3	copy fasta	chr2	44936702	44951071
a0001c0001t0020	0/0	2709	4	3	1	0	0	0	SIX3_chr2_44936702_44951071	SIX3	copy fasta	chr2	44936702	44951071
a0001c0001t0021	0/0	2710	4	3	0	1	0	0	SIX3_chr2_44936702_44951071	SIX3	copy fasta	chr2	44936702	44951071
a0001c0001t0022	0/1	2709	4	0	0	3	0	0	SIX3_chr2_44936702_44951071	SIX3	copy fasta	chr2	44936702	44951071
a0001c0001t0023	0/0	2709	4	0	0	4	0	0	SIX3_chr2_44936702_44951071	SIX3	copy fasta	chr2	44936702	44951071
a0001c0001t0024	0/0	2708	4	0	0	4	0	0	SIX3_chr2_44936702_44951071	SIX3	copy fasta	chr2	44936702	44951071
a0001c0001t0025	0/0	2707	4	0	0	4	0	0	SIX3_chr2_44936702_44951071	SIX3	copy fasta	chr2	44936702	44951071
a0001c0001t0026	0/0	2711	2	1	0	1	0	0	SIX3_chr2_44936702_44951071	SIX3	copy fasta	chr2	44936702	44951071
a0001c0001t0027	0/0	2708	3	0	0	3	0	0	SIX3_chr2_44936702_44951071	SIX3	copy fasta	chr2	44936702	44951071
a0001c0001t0028	0/0	2708	3	3	0	0	0	0	SIX3_chr2_44936702_44951071	SIX3	copy fasta	chr2	44936702	44951071
a0001c0001t0029	0/0	2706	2	2	0	0	0	0	SIX3_chr2_44936702_44951071	SIX3	copy fasta	chr2	44936702	44951071
a0001c0001t0030	0/0	2710	2	0	0	2	0	0	SIX3_chr2_44936702_44951071	SIX3	copy fasta	chr2	44936702	44951071
a0001c0001t0031	0/0	2710	2	0	0	2	0	0	SIX3_chr2_44936702_44951071	SIX3	copy fasta	chr2	44936702	44951071
a0001c0001t0034	0/0	2705	1	1	0	0	0	0	SIX3_chr2_44936702_44951071	SIX3	copy fasta	chr2	44936702	44951071
a0001c0001t0035	0/0	2704	2	2	0	0	0	0	SIX3_chr2_44936702_44951071	SIX3	copy fasta	chr2	44936702	44951071
a0001c0001t0037	0/0	2709	1	0	0	1	0	0	SIX3_chr2_44936702_44951071	SIX3	copy fasta	chr2	44936702	44951071
a0001c0001t0038	0/0	2714	1	0	0	1	0	0	SIX3_chr2_44936702_44951071	SIX3	copy fasta	chr2	44936702	44951071
a0001c0001t0039	0/0	2712	1	0	0	0	0	1	SIX3_chr2_44936702_44951071	SIX3	copy fasta	chr2	44936702	44951071
a0001c0001t0040	0/0	2711	1	0	0	1	0	0	SIX3_chr2_44936702_44951071	SIX3	copy fasta	chr2	44936702	44951071
a0001c0001t0041	0/0	2711	1	0	0	1	0	0	SIX3_chr2_44936702_44951071	SIX3	copy fasta	chr2	44936702	44951071
a0001c0001t0042	0/0	2711	1	0	1	0	0	0	SIX3_chr2_44936702_44951071	SIX3	copy fasta	chr2	44936702	44951071
a0001c0001t0043	0/0	2710	1	0	1	0	0	0	SIX3_chr2_44936702_44951071	SIX3	copy fasta	chr2	44936702	44951071
a0001c0001t0044	0/0	2711	1	1	0	0	0	0	SIX3_chr2_44936702_44951071	SIX3	copy fasta	chr2	44936702	44951071
a0001c0001t0045	0/0	2709	1	0	0	1	0	0	SIX3_chr2_44936702_44951071	SIX3	copy fasta	chr2	44936702	44951071
a0001c0001t0046	0/0	2710	1	0	1	0	0	0	SIX3_chr2_44936702_44951071	SIX3	copy fasta	chr2	44936702	44951071
a0001c0001t0047	0/0	2709	1	0	0	1	0	0	SIX3_chr2_44936702_44951071	SIX3	copy fasta	chr2	44936702	44951071
a0001c0001t0048	0/0	2708	1	0	1	0	0	0	SIX3_chr2_44936702_44951071	SIX3	copy fasta	chr2	44936702	44951071
a0001c0001t0049	0/0	2708	1	0	0	0	0	1	SIX3_chr2_44936702_44951071	SIX3	copy fasta	chr2	44936702	44951071
a0001c0001t0050	0/0	2709	1	0	0	0	0	1	SIX3_chr2_44936702_44951071	SIX3	copy fasta	chr2	44936702	44951071
a0001c0001t0051	0/0	2708	1	1	0	0	0	0	SIX3_chr2_44936702_44951071	SIX3	copy fasta	chr2	44936702	44951071
a0001c0001t0052	0/0	2709	1	1	0	0	0	0	SIX3_chr2_44936702_44951071	SIX3	copy fasta	chr2	44936702	44951071
a0001c0001t0053	0/0	2709	1	0	0	1	0	0	SIX3_chr2_44936702_44951071	SIX3	copy fasta	chr2	44936702	44951071
a0001c0001t0054	0/0	2707	1	1	0	0	0	0	SIX3_chr2_44936702_44951071	SIX3	copy fasta	chr2	44936702	44951071
a0001c0001t0055	0/0	2708	1	0	0	1	0	0	SIX3_chr2_44936702_44951071	SIX3	copy fasta	chr2	44936702	44951071
a0001c0001t0056	0/0	2707	1	1	0	0	0	0	SIX3_chr2_44936702_44951071	SIX3	copy fasta	chr2	44936702	44951071
a0001c0001t0057	0/0	2695	1	0	0	1	0	0	SIX3_chr2_44936702_44951071	SIX3	copy fasta	chr2	44936702	44951071
a0001c0001t0058	0/0	2708	1	0	0	1	0	0	SIX3_chr2_44936702_44951071	SIX3	copy fasta	chr2	44936702	44951071
a0001c0001t0061	0/0	2713	1	0	0	1	0	0	SIX3_chr2_44936702_44951071	SIX3	copy fasta	chr2	44936702	44951071
a0001c0001t0062	0/0	2708	1	1	0	0	0	0	SIX3_chr2_44936702_44951071	SIX3	copy fasta	chr2	44936702	44951071
a0001c0001t0063	0/0	2707	1	1	0	0	0	0	SIX3_chr2_44936702_44951071	SIX3	copy fasta	chr2	44936702	44951071
a0001c0001t0064	0/0	2707	1	1	0	0	0	0	SIX3_chr2_44936702_44951071	SIX3	copy fasta	chr2	44936702	44951071
a0001c0001t0065	0/0	2706	1	1	0	0	0	0	SIX3_chr2_44936702_44951071	SIX3	copy fasta	chr2	44936702	44951071
a0001c0001t0067	0/0	2703	1	1	0	0	0	0	SIX3_chr2_44936702_44951071	SIX3	copy fasta	chr2	44936702	44951071
a0001c0002t0006	0/0	2706	13	1	4	5	1	2	SIX3_chr2_44936702_44951071	SIX3	copy fasta	chr2	44936702	44951071
a0001c0002t0034	0/0	2705	1	0	0	1	0	0	SIX3_chr2_44936702_44951071	SIX3	copy fasta	chr2	44936702	44951071
a0001c0002t0066	0/0	2705	1	0	0	1	0	0	SIX3_chr2_44936702_44951071	SIX3	copy fasta	chr2	44936702	44951071
a0001c0003t0005	1/0	2713	1	0	0	0	0	0	SIX3_chr2_44936702_44951071	SIX3	copy fasta	chr2	44936702	44951071
a0001c0003t0011	0/0	2712	9	0	5	2	0	2	SIX3_chr2_44936702_44951071	SIX3	copy fasta	chr2	44936702	44951071
a0001c0003t0032	0/0	2713	2	0	0	0	0	2	SIX3_chr2_44936702_44951071	SIX3	copy fasta	chr2	44936702	44951071
a0001c0003t0059	0/0	2711	1	0	1	0	0	0	SIX3_chr2_44936702_44951071	SIX3	copy fasta	chr2	44936702	44951071
a0001c0003t0060	0/0	2712	1	0	0	1	0	0	SIX3_chr2_44936702_44951071	SIX3	copy fasta	chr2	44936702	44951071
a0001c0004t0002	0/0	2710	2	0	2	0	0	0	SIX3_chr2_44936702_44951071	SIX3	copy fasta	chr2	44936702	44951071
a0001c0004t0014	0/0	2709	3	3	0	0	0	0	SIX3_chr2_44936702_44951071	SIX3	copy fasta	chr2	44936702	44951071
a0001c0004t0026	0/0	2711	1	1	0	0	0	0	SIX3_chr2_44936702_44951071	SIX3	copy fasta	chr2	44936702	44951071
a0001c0005t0033	0/0	2707	2	1	0	0	0	1	SIX3_chr2_44936702_44951071	SIX3	copy fasta	chr2	44936702	44951071
a0001c0005t0068	0/0	2707	1	1	0	0	0	0	SIX3_chr2_44936702_44951071	SIX3	copy fasta	chr2	44936702	44951071
a0001c0005t0069	0/0	2707	1	1	0	0	0	0	SIX3_chr2_44936702_44951071	SIX3	copy fasta	chr2	44936702	44951071
a0001c0006t0002	0/0	2710	1	0	1	0	0	0	SIX3_chr2_44936702_44951071	SIX3	copy fasta	chr2	44936702	44951071
a0001c0011t0006	0/0	2706	1	0	1	0	0	0	SIX3_chr2_44936702_44951071	SIX3	copy fasta	chr2	44936702	44951071
a0002c0009t0005	0/0	2713	1	0	1	0	0	0	SIX3_chr2_44936702_44951071	SIX3	copy fasta	chr2	44936702	44951071
a0003c0008t0002	0/0	2710	1	0	0	1	0	0	SIX3_chr2_44936702_44951071	SIX3	copy fasta	chr2	44936702	44951071
a0004c0010t0029	0/0	2706	1	1	0	0	0	0	SIX3_chr2_44936702_44951071	SIX3	copy fasta	chr2	44936702	44951071
a0005c0007t0036	0/0	2709	1	0	0	1	0	0	SIX3_chr2_44936702_44951071	SIX3	copy fasta	chr2	44936702	44951071

actghapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	chr	start	end
a0001c0001t0001g0001	0/0	84	8	12	48	7	9	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
a0001c0001t0001g0003	0/0	3	3	0	0	0	0	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
a0001c0001t0001g0009	0/0	2	2	0	0	0	0	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
a0001c0001t0001g0013	0/0	1	0	0	0	0	1	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
a0001c0001t0002g0002	0/0	67	7	7	41	2	10	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
a0001c0001t0002g0015	0/0	1	0	0	1	0	0	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
a0001c0001t0002g0016	0/0	1	0	0	1	0	0	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
a0001c0001t0002g0018	0/0	1	0	0	1	0	0	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
a0001c0001t0003g0001	0/0	1	1	0	0	0	0	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
a0001c0001t0003g0003	0/0	31	1	1	26	0	3	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
a0001c0001t0003g0014	0/0	1	0	0	0	0	1	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
a0001c0001t0004g0001	0/0	22	2	4	13	0	3	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
a0001c0001t0004g0010	0/0	1	0	0	0	0	1	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
a0001c0001t0005g0003	0/0	16	2	12	1	1	0	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
a0001c0001t0005g0006	0/0	2	0	0	2	0	0	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
a0001c0001t0006g0004	0/0	6	6	0	0	0	0	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
a0001c0001t0007g0001	0/0	14	7	1	4	0	2	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
a0001c0001t0007g0003	0/0	1	1	0	0	0	0	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
a0001c0001t0008g0003	0/0	11	1	4	2	4	0	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
a0001c0001t0008g0006	0/0	2	0	0	2	0	0	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
a0001c0001t0009g0001	0/0	11	1	3	4	0	3	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
a0001c0001t0009g0011	0/0	1	0	0	1	0	0	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
a0001c0001t0010g0001	0/0	11	8	2	1	0	0	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
a0001c0001t0010g0003	0/0	1	0	0	1	0	0	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
a0001c0001t0012g0003	0/0	7	6	1	0	0	0	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
a0001c0001t0012g0004	0/0	1	1	0	0	0	0	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
a0001c0001t0013g0001	0/0	6	0	5	1	0	0	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
a0001c0001t0013g0002	0/0	1	1	0	0	0	0	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
a0001c0001t0014g0002	0/0	3	0	0	3	0	0	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
a0001c0001t0015g0002	0/0	5	0	2	3	0	0	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
a0001c0001t0016g0003	0/0	4	0	0	0	1	3	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
a0001c0001t0016g0006	0/0	1	0	0	1	0	0	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
a0001c0001t0017g0002	0/0	5	0	5	0	0	0	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
a0001c0001t0018g0002	0/0	4	3	1	0	0	0	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
a0001c0001t0018g0012	0/0	1	1	0	0	0	0	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
a0001c0001t0019g0001	0/0	4	4	0	0	0	0	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
a0001c0001t0020g0007	0/0	4	3	1	0	0	0	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
a0001c0001t0021g0002	0/0	3	3	0	0	0	0	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
a0001c0001t0021g0017	0/0	1	0	0	1	0	0	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
a0001c0001t0022g0003	0/1	4	0	0	3	0	0	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
a0001c0001t0023g0003	0/0	4	0	0	4	0	0	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
a0001c0001t0024g0003	0/0	4	0	0	4	0	0	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
a0001c0001t0025g0003	0/0	4	0	0	4	0	0	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
a0001c0001t0026g0002	0/0	2	1	0	1	0	0	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
a0001c0001t0027g0001	0/0	3	0	0	3	0	0	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
a0001c0001t0028g0003	0/0	3	3	0	0	0	0	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
a0001c0001t0029g0004	0/0	2	2	0	0	0	0	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
a0001c0001t0030g0002	0/0	2	0	0	2	0	0	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
a0001c0001t0031g0001	0/0	2	0	0	2	0	0	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
a0001c0001t0034g0004	0/0	1	1	0	0	0	0	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
a0001c0001t0035g0004	0/0	2	2	0	0	0	0	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
a0001c0001t0037g0001	0/0	1	0	0	1	0	0	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
a0001c0001t0038g0003	0/0	1	0	0	1	0	0	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
a0001c0001t0039g0003	0/0	1	0	0	0	0	1	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
a0001c0001t0040g0002	0/0	1	0	0	1	0	0	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
a0001c0001t0041g0001	0/0	1	0	0	1	0	0	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
a0001c0001t0042g0001	0/0	1	0	1	0	0	0	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
a0001c0001t0043g0001	0/0	1	0	1	0	0	0	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
a0001c0001t0044g0002	0/0	1	1	0	0	0	0	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
a0001c0001t0045g0002	0/0	1	0	0	1	0	0	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
a0001c0001t0046g0001	0/0	1	0	1	0	0	0	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
a0001c0001t0047g0001	0/0	1	0	0	1	0	0	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
a0001c0001t0048g0002	0/0	1	0	1	0	0	0	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
a0001c0001t0049g0002	0/0	1	0	0	0	0	1	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
a0001c0001t0050g0001	0/0	1	0	0	0	0	1	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
a0001c0001t0051g0003	0/0	1	1	0	0	0	0	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
a0001c0001t0052g0002	0/0	1	1	0	0	0	0	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
a0001c0001t0053g0001	0/0	1	0	0	1	0	0	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
a0001c0001t0054g0001	0/0	1	1	0	0	0	0	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
a0001c0001t0055g0003	0/0	1	0	0	1	0	0	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
a0001c0001t0056g0003	0/0	1	1	0	0	0	0	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
a0001c0001t0057g0001	0/0	1	0	0	1	0	0	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
a0001c0001t0058g0003	0/0	1	0	0	1	0	0	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
a0001c0001t0061g0006	0/0	1	0	0	1	0	0	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
a0001c0001t0062g0004	0/0	1	1	0	0	0	0	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
a0001c0001t0063g0004	0/0	1	1	0	0	0	0	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
a0001c0001t0064g0004	0/0	1	1	0	0	0	0	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
a0001c0001t0065g0004	0/0	1	1	0	0	0	0	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
a0001c0001t0067g0004	0/0	1	1	0	0	0	0	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
a0001c0002t0006g0004	0/0	13	1	4	5	1	2	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
a0001c0002t0034g0004	0/0	1	0	0	1	0	0	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
a0001c0002t0066g0004	0/0	1	0	0	1	0	0	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
a0001c0003t0005g0003	1/0	1	0	0	0	0	0	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
a0001c0003t0011g0005	0/0	9	0	5	2	0	2	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
a0001c0003t0032g0005	0/0	2	0	0	0	0	2	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
a0001c0003t0059g0005	0/0	1	0	1	0	0	0	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
a0001c0003t0060g0005	0/0	1	0	0	1	0	0	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
a0001c0004t0002g0002	0/0	2	0	2	0	0	0	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
a0001c0004t0014g0002	0/0	3	3	0	0	0	0	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
a0001c0004t0026g0002	0/0	1	1	0	0	0	0	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
a0001c0005t0033g0008	0/0	2	1	0	0	0	1	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
a0001c0005t0068g0008	0/0	1	1	0	0	0	0	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
a0001c0005t0069g0008	0/0	1	1	0	0	0	0	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
a0001c0006t0002g0002	0/0	1	0	1	0	0	0	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
a0001c0011t0006g0004	0/0	1	0	1	0	0	0	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
a0002c0009t0005g0003	0/0	1	0	1	0	0	0	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
a0003c0008t0002g0002	0/0	1	0	0	1	0	0	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
a0004c0010t0029g0004	0/0	1	1	0	0	0	0	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
a0005c0007t0036g0001	0/0	1	0	0	1	0	0	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071

sampleid	ID haplotypeid	ahapid	chapid	thapid	ghapid	gpopname	popname	regionname	genename	chr	start	end
HG00099	hp1	a0001	c0001	t0008	g0003	EUR	GBR	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
HG00099	hp2	a0001	c0001	t0008	g0003	EUR	GBR	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
HG00140	hp1	a0001	c0001	t0001	g0001	EUR	GBR	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
HG00140	hp2	a0001	c0001	t0016	g0003	EUR	GBR	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
HG00280	hp1	a0001	c0001	t0002	g0002	EUR	FIN	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
HG00280	hp2	a0001	c0001	t0001	g0001	EUR	FIN	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
HG00323	hp1	a0001	c0001	t0008	g0003	EUR	FIN	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
HG00323	hp2	a0001	c0001	t0001	g0001	EUR	FIN	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
HG00423	hp1	a0001	c0001	t0002	g0002	EAS	CHS	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
HG00423	hp2	a0001	c0002	t0066	g0004	EAS	CHS	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
HG00438	hp1	a0001	c0001	t0001	g0001	EAS	CHS	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
HG00438	hp2	a0001	c0001	t0002	g0002	EAS	CHS	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
HG00544	hp1	a0001	c0001	t0002	g0002	EAS	CHS	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
HG00544	hp2	a0001	c0001	t0002	g0002	EAS	CHS	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
HG00558	hp1	a0001	c0001	t0002	g0002	EAS	CHS	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
HG00558	hp2	a0001	c0001	t0003	g0003	EAS	CHS	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
HG00597	hp1	a0001	c0001	t0002	g0002	EAS	CHS	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
HG00597	hp2	a0001	c0002	t0006	g0004	EAS	CHS	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
HG00609	hp1	a0001	c0001	t0002	g0002	EAS	CHS	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
HG00609	hp2	a0001	c0001	t0055	g0003	EAS	CHS	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
HG00639	hp1	a0001	c0001	t0009	g0001	AMR	PUR	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
HG00639	hp2	a0001	c0001	t0004	g0001	AMR	PUR	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
HG00642	hp1	a0001	c0001	t0010	g0001	AMR	PUR	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
HG00642	hp2	a0001	c0001	t0002	g0002	AMR	PUR	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
HG00673	hp1	a0001	c0001	t0002	g0016	EAS	CHS	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
HG00673	hp2	a0001	c0001	t0003	g0003	EAS	CHS	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
HG00733	hp1	a0001	c0002	t0006	g0004	AMR	PUR	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
HG00733	hp2	a0001	c0001	t0005	g0003	AMR	PUR	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
HG00735	hp1	a0001	c0001	t0005	g0003	AMR	PUR	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
HG00735	hp2	a0001	c0001	t0002	g0002	AMR	PUR	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
HG00738	hp1	a0001	c0004	t0002	g0002	AMR	PUR	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
HG00738	hp2	a0001	c0001	t0002	g0002	AMR	PUR	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
HG00741	hp1	a0001	c0001	t0018	g0002	AMR	PUR	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
HG00741	hp2	a0001	c0003	t0011	g0005	AMR	PUR	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
HG01069	hp1	a0001	c0001	t0009	g0001	AMR	PUR	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
HG01069	hp2	a0001	c0001	t0005	g0003	AMR	PUR	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
HG01070	hp1	a0001	c0001	t0004	g0001	AMR	PUR	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
HG01070	hp2	a0001	c0003	t0059	g0005	AMR	PUR	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
HG01071	hp1	a0001	c0001	t0004	g0001	AMR	PUR	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
HG01071	hp2	a0001	c0001	t0009	g0001	AMR	PUR	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
HG01074	hp1	a0001	c0001	t0008	g0003	AMR	PUR	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
HG01074	hp2	a0001	c0001	t0008	g0003	AMR	PUR	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
HG01081	hp1	a0001	c0001	t0043	g0001	AMR	PUR	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
HG01081	hp2	a0001	c0001	t0020	g0007	AMR	PUR	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
HG01099	hp1	a0001	c0001	t0008	g0003	AMR	PUR	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
HG01099	hp2	a0001	c0001	t0010	g0001	AMR	PUR	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
HG01106	hp1	a0001	c0001	t0012	g0003	AMR	PUR	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
HG01106	hp2	a0001	c0001	t0013	g0001	AMR	PUR	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
HG01109	hp1	a0001	c0001	t0002	g0002	AMR	PUR	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
HG01109	hp2	a0001	c0001	t0001	g0001	AMR	PUR	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
HG01167	hp1	a0001	c0003	t0011	g0005	AMR	PUR	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
HG01167	hp2	a0001	c0001	t0008	g0003	AMR	PUR	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
HG01168	hp1	a0001	c0011	t0006	g0004	AMR	PUR	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
HG01168	hp2	a0001	c0001	t0001	g0001	AMR	PUR	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
HG01169	hp1	a0001	c0003	t0011	g0005	AMR	PUR	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
HG01169	hp2	a0001	c0001	t0001	g0001	AMR	PUR	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
HG01192	hp1	a0001	c0001	t0005	g0003	AMR	PUR	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
HG01192	hp2	a0001	c0001	t0005	g0003	AMR	PUR	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
HG01243	hp1	a0001	c0001	t0001	g0001	AMR	PUR	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
HG01243	hp2	a0001	c0001	t0003	g0003	AMR	PUR	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
HG01255	hp1	a0001	c0001	t0005	g0003	AMR	CLM	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
HG01255	hp2	a0001	c0001	t0002	g0002	AMR	CLM	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
HG01256	hp1	a0001	c0001	t0007	g0001	AMR	CLM	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
HG01256	hp2	a0001	c0001	t0005	g0003	AMR	CLM	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
HG01257	hp1	a0001	c0001	t0015	g0002	AMR	CLM	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
HG01257	hp2	a0001	c0002	t0006	g0004	AMR	CLM	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
HG01258	hp1	a0001	c0001	t0001	g0001	AMR	CLM	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
HG01258	hp2	a0001	c0001	t0015	g0002	AMR	CLM	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
HG01261	hp1	a0001	c0003	t0011	g0005	AMR	CLM	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
HG01261	hp2	a0001	c0001	t0005	g0003	AMR	CLM	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
HG01346	hp1	a0001	c0001	t0005	g0003	AMR	CLM	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
HG01346	hp2	a0001	c0004	t0002	g0002	AMR	CLM	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
HG01358	hp1	a0001	c0001	t0005	g0003	AMR	CLM	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
HG01358	hp2	a0001	c0001	t0001	g0001	AMR	CLM	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
HG01433	hp1	a0001	c0001	t0001	g0001	AMR	CLM	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
HG01433	hp2	a0001	c0001	t0005	g0003	AMR	CLM	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
HG01496	hp1	a0002	c0009	t0005	g0003	AMR	CLM	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
HG01496	hp2	a0001	c0001	t0005	g0003	AMR	CLM	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
HG01515	hp1	a0001	c0001	t0005	g0003	EUR	IBS	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
HG01515	hp2	a0001	c0001	t0001	g0001	EUR	IBS	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
HG01516	hp1	a0001	c0001	t0001	g0001	EUR	IBS	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
HG01516	hp2	a0001	c0002	t0006	g0004	EUR	IBS	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
HG01517	hp1	a0001	c0001	t0001	g0001	EUR	IBS	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
HG01517	hp2	a0001	c0001	t0008	g0003	EUR	IBS	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
HG01884	hp1	a0001	c0001	t0012	g0003	AFR	ACB	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
HG01884	hp2	a0001	c0001	t0007	g0001	AFR	ACB	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
HG01891	hp1	a0001	c0001	t0007	g0001	AFR	ACB	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
HG01891	hp2	a0001	c0001	t0005	g0003	AFR	ACB	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
HG01934	hp1	a0001	c0001	t0001	g0001	AMR	PEL	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
HG01934	hp2	a0001	c0001	t0017	g0002	AMR	PEL	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
HG01943	hp1	a0001	c0001	t0001	g0001	AMR	PEL	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
HG01943	hp2	a0001	c0001	t0017	g0002	AMR	PEL	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
HG01952	hp1	a0001	c0003	t0011	g0005	AMR	PEL	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
HG01952	hp2	a0001	c0001	t0017	g0002	AMR	PEL	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
HG01975	hp1	a0001	c0002	t0006	g0004	AMR	PEL	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
HG01975	hp2	a0001	c0001	t0017	g0002	AMR	PEL	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
HG01978	hp1	a0001	c0001	t0001	g0001	AMR	PEL	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
HG01978	hp2	a0001	c0001	t0004	g0001	AMR	PEL	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
HG01981	hp1	a0001	c0001	t0001	g0001	AMR	PEL	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
HG01981	hp2	a0001	c0001	t0002	g0002	AMR	PEL	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
HG01993	hp1	a0001	c0001	t0048	g0002	AMR	PEL	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
HG01993	hp2	a0001	c0001	t0013	g0001	AMR	PEL	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
HG02004	hp1	a0001	c0001	t0046	g0001	AMR	PEL	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
HG02004	hp2	a0001	c0006	t0002	g0002	AMR	PEL	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
HG02015	hp1	a0001	c0001	t0002	g0002	EAS	KHV	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
HG02015	hp2	a0001	c0001	t0009	g0001	EAS	KHV	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
HG02027	hp1	a0001	c0001	t0045	g0002	EAS	KHV	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
HG02027	hp2	a0001	c0001	t0053	g0001	EAS	KHV	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
HG02040	hp1	a0001	c0001	t0001	g0001	EAS	KHV	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
HG02040	hp2	a0001	c0001	t0004	g0001	EAS	KHV	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
HG02055	hp1	a0001	c0001	t0001	g0001	AFR	ACB	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
HG02055	hp2	a0001	c0004	t0014	g0002	AFR	ACB	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
HG02056	hp1	a0001	c0001	t0026	g0002	EAS	KHV	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
HG02056	hp2	a0001	c0001	t0001	g0001	EAS	KHV	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
HG02071	hp1	a0001	c0001	t0004	g0001	EAS	KHV	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
HG02071	hp2	a0001	c0001	t0001	g0001	EAS	KHV	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
HG02074	hp1	a0001	c0001	t0002	g0002	EAS	KHV	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
HG02074	hp2	a0001	c0001	t0004	g0001	EAS	KHV	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
HG02080	hp1	a0001	c0001	t0001	g0001	EAS	KHV	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
HG02080	hp2	a0001	c0001	t0003	g0003	EAS	KHV	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
HG02083	hp1	a0001	c0001	t0027	g0001	EAS	KHV	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
HG02083	hp2	a0001	c0001	t0002	g0002	EAS	KHV	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
HG02129	hp1	a0001	c0001	t0002	g0002	EAS	KHV	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
HG02129	hp2	a0001	c0001	t0002	g0002	EAS	KHV	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
HG02132	hp1	a0001	c0001	t0001	g0001	EAS	KHV	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
HG02132	hp2	a0001	c0001	t0004	g0001	EAS	KHV	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
HG02135	hp1	a0001	c0001	t0023	g0003	EAS	KHV	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
HG02135	hp2	a0001	c0001	t0001	g0001	EAS	KHV	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
HG02145	hp1	a0001	c0001	t0019	g0001	AFR	ACB	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
HG02145	hp2	a0001	c0001	t0019	g0001	AFR	ACB	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
HG02148	hp1	a0001	c0001	t0013	g0001	AMR	PEL	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
HG02148	hp2	a0001	c0001	t0001	g0001	AMR	PEL	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
HG02155	hp1	a0001	c0001	t0024	g0003	EAS	CDX	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
HG02155	hp2	a0001	c0001	t0002	g0002	EAS	CDX	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
HG02165	hp1	a0001	c0001	t0003	g0003	EAS	CDX	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
HG02165	hp2	a0001	c0001	t0002	g0002	EAS	CDX	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
HG02257	hp1	a0001	c0001	t0028	g0003	AFR	ACB	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
HG02257	hp2	a0001	c0001	t0001	g0003	AFR	ACB	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
HG02258	hp1	a0001	c0001	t0019	g0001	AFR	ACB	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
HG02258	hp2	a0001	c0001	t0005	g0003	AFR	ACB	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
HG02273	hp1	a0001	c0001	t0017	g0002	AMR	PEL	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
HG02273	hp2	a0001	c0001	t0013	g0001	AMR	PEL	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
HG02280	hp1	a0001	c0001	t0012	g0003	AFR	ACB	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
HG02280	hp2	a0001	c0001	t0004	g0001	AFR	ACB	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
HG02300	hp1	a0001	c0001	t0013	g0001	AMR	PEL	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
HG02300	hp2	a0001	c0002	t0006	g0004	AMR	PEL	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
HG02451	hp1	a0001	c0001	t0067	g0004	AFR	ACB	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
HG02451	hp2	a0001	c0001	t0001	g0001	AFR	ACB	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
HG02572	hp1	a0001	c0001	t0002	g0002	AFR	GWD	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
HG02572	hp2	a0001	c0001	t0012	g0003	AFR	GWD	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
HG02602	hp1	a0001	c0001	t0001	g0001	SAS	PJL	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
HG02602	hp2	a0001	c0001	t0003	g0014	SAS	PJL	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
HG02615	hp1	a0004	c0010	t0029	g0004	AFR	GWD	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
HG02615	hp2	a0001	c0001	t0001	g0001	AFR	GWD	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
HG02622	hp1	a0001	c0001	t0012	g0003	AFR	GWD	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
HG02622	hp2	a0001	c0001	t0028	g0003	AFR	GWD	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
HG02630	hp1	a0001	c0001	t0009	g0001	AFR	GWD	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
HG02630	hp2	a0001	c0001	t0002	g0002	AFR	GWD	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
HG02647	hp1	a0001	c0001	t0001	g0003	AFR	GWD	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
HG02647	hp2	a0001	c0001	t0044	g0002	AFR	GWD	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
HG02683	hp1	a0001	c0001	t0007	g0001	SAS	PJL	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
HG02683	hp2	a0001	c0001	t0002	g0002	SAS	PJL	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
HG02698	hp1	a0001	c0001	t0001	g0001	SAS	PJL	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
HG02698	hp2	a0001	c0002	t0006	g0004	SAS	PJL	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
HG02717	hp1	a0001	c0001	t0010	g0001	AFR	GWD	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
HG02717	hp2	a0001	c0001	t0006	g0004	AFR	GWD	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
HG02723	hp1	a0001	c0001	t0007	g0001	AFR	GWD	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
HG02723	hp2	a0001	c0001	t0001	g0001	AFR	GWD	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
HG02735	hp1	a0001	c0003	t0032	g0005	SAS	PJL	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
HG02735	hp2	a0001	c0001	t0003	g0003	SAS	PJL	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
HG02738	hp1	a0001	c0001	t0002	g0002	SAS	PJL	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
HG02738	hp2	a0001	c0001	t0001	g0013	SAS	PJL	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
HG02809	hp1	a0001	c0005	t0033	g0008	AFR	GWD	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
HG02809	hp2	a0001	c0001	t0013	g0002	AFR	GWD	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
HG02818	hp1	a0001	c0001	t0035	g0004	AFR	GWD	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
HG02818	hp2	a0001	c0001	t0010	g0001	AFR	GWD	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
HG02886	hp1	a0001	c0001	t0010	g0001	AFR	GWD	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
HG02886	hp2	a0001	c0001	t0029	g0004	AFR	GWD	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
HG02895	hp1	a0001	c0001	t0029	g0004	AFR	GWD	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
HG02895	hp2	a0001	c0001	t0052	g0002	AFR	GWD	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
HG02896	hp1	a0001	c0001	t0001	g0009	AFR	GWD	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
HG02896	hp2	a0001	c0001	t0010	g0001	AFR	GWD	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
HG02897	hp1	a0001	c0001	t0010	g0001	AFR	GWD	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
HG02897	hp2	a0001	c0001	t0021	g0002	AFR	GWD	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
HG02922	hp1	a0001	c0001	t0012	g0003	AFR	ESN	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
HG02922	hp2	a0001	c0001	t0002	g0002	AFR	ESN	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
HG02965	hp1	a0001	c0001	t0001	g0009	AFR	ESN	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
HG02965	hp2	a0001	c0001	t0007	g0003	AFR	ESN	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
HG02970	hp1	a0001	c0001	t0001	g0003	AFR	ESN	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
HG02970	hp2	a0001	c0001	t0006	g0004	AFR	ESN	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
HG02976	hp1	a0001	c0004	t0014	g0002	AFR	ESN	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
HG02976	hp2	a0001	c0005	t0068	g0008	AFR	ESN	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
HG03017	hp1	a0001	c0001	t0002	g0002	SAS	PJL	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
HG03017	hp2	a0001	c0001	t0004	g0010	SAS	PJL	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
HG03041	hp1	a0001	c0001	t0051	g0003	AFR	GWD	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
HG03041	hp2	a0001	c0001	t0018	g0002	AFR	GWD	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
HG03098	hp1	a0001	c0001	t0064	g0004	AFR	MSL	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
HG03098	hp2	a0001	c0001	t0062	g0004	AFR	MSL	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
HG03130	hp1	a0001	c0001	t0020	g0007	AFR	ESN	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
HG03130	hp2	a0001	c0001	t0054	g0001	AFR	ESN	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
HG03139	hp1	a0001	c0001	t0018	g0002	AFR	ESN	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
HG03139	hp2	a0001	c0001	t0026	g0002	AFR	ESN	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
HG03195	hp1	a0001	c0001	t0002	g0002	AFR	ESN	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
HG03195	hp2	a0001	c0001	t0018	g0002	AFR	ESN	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
HG03209	hp1	a0001	c0001	t0012	g0004	AFR	MSL	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
HG03209	hp2	a0001	c0001	t0006	g0004	AFR	MSL	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
HG03225	hp1	a0001	c0001	t0001	g0001	AFR	MSL	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
HG03225	hp2	a0001	c0001	t0018	g0012	AFR	MSL	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
HG03239	hp1	a0001	c0001	t0002	g0002	SAS	PJL	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
HG03239	hp2	a0001	c0001	t0002	g0002	SAS	PJL	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
HG03453	hp1	a0001	c0001	t0020	g0007	AFR	MSL	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
HG03453	hp2	a0001	c0001	t0034	g0004	AFR	MSL	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
HG03486	hp1	a0001	c0001	t0007	g0001	AFR	MSL	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
HG03486	hp2	a0001	c0001	t0006	g0004	AFR	MSL	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
HG03491	hp1	a0001	c0001	t0001	g0001	SAS	PJL	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
HG03491	hp2	a0001	c0001	t0016	g0003	SAS	PJL	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
HG03492	hp1	a0001	c0001	t0004	g0001	SAS	PJL	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
HG03492	hp2	a0001	c0001	t0001	g0001	SAS	PJL	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
HG03516	hp1	a0001	c0004	t0026	g0002	AFR	ESN	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
HG03516	hp2	a0001	c0001	t0010	g0001	AFR	ESN	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
HG03540	hp1	a0001	c0001	t0007	g0001	AFR	GWD	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
HG03540	hp2	a0001	c0001	t0012	g0003	AFR	GWD	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
HG03579	hp1	a0001	c0001	t0001	g0001	AFR	MSL	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
HG03579	hp2	a0001	c0001	t0010	g0001	AFR	MSL	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
HG03654	hp1	a0001	c0005	t0033	g0008	SAS	PJL	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
HG03654	hp2	a0001	c0001	t0003	g0003	SAS	PJL	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
HG03669	hp1	a0001	c0001	t0049	g0002	SAS	PJL	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
HG03669	hp2	a0001	c0001	t0009	g0001	SAS	PJL	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
HG03688	hp1	a0001	c0001	t0016	g0003	SAS	STU	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
HG03688	hp2	a0001	c0001	t0050	g0001	SAS	STU	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
HG03704	hp1	a0001	c0001	t0004	g0001	SAS	PJL	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
HG03704	hp2	a0001	c0001	t0007	g0001	SAS	PJL	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
HG03710	hp1	a0001	c0001	t0001	g0001	SAS	PJL	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
HG03710	hp2	a0001	c0003	t0011	g0005	SAS	PJL	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
HG03831	hp1	a0001	c0003	t0011	g0005	SAS	BEB	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
HG03831	hp2	a0001	c0001	t0001	g0001	SAS	BEB	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
HG03834	hp1	a0001	c0001	t0001	g0001	SAS	BEB	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
HG03834	hp2	a0001	c0001	t0001	g0001	SAS	BEB	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
HG03942	hp1	a0001	c0001	t0039	g0003	SAS	BEB	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
HG03942	hp2	a0001	c0001	t0002	g0002	SAS	BEB	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
HG04115	hp1	a0001	c0001	t0009	g0001	SAS	STU	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
HG04115	hp2	a0001	c0001	t0009	g0001	SAS	STU	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
HG04184	hp1	a0001	c0001	t0002	g0002	SAS	BEB	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
HG04184	hp2	a0001	c0001	t0003	g0003	SAS	BEB	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
HG04199	hp1	a0001	c0001	t0002	g0002	SAS	STU	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
HG04199	hp2	a0001	c0002	t0006	g0004	SAS	STU	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
HG04204	hp1	a0001	c0003	t0032	g0005	SAS	STU	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
HG04204	hp2	a0001	c0001	t0002	g0002	SAS	STU	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
HG04228	hp1	a0001	c0001	t0004	g0001	SAS	STU	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
HG04228	hp2	a0001	c0001	t0016	g0003	SAS	STU	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
NA18522	hp1	a0001	c0001	t0056	g0003	AFR	YRI	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
NA18522	hp2	a0001	c0001	t0001	g0001	AFR	YRI	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
NA18612	hp1	a0001	c0001	t0037	g0001	EAS	CHB	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
NA18612	hp2	a0001	c0001	t0004	g0001	EAS	CHB	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
NA18747	hp1	a0001	c0001	t0002	g0002	EAS	CHB	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
NA18747	hp2	a0001	c0001	t0003	g0003	EAS	CHB	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
NA18906	hp1	a0001	c0001	t0002	g0002	AFR	YRI	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
NA18906	hp2	a0001	c0001	t0021	g0002	AFR	YRI	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
NA18939	hp1	a0001	c0001	t0003	g0003	EAS	JPT	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
NA18939	hp2	a0001	c0001	t0010	g0001	EAS	JPT	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
NA18940	hp1	a0001	c0001	t0023	g0003	EAS	JPT	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
NA18940	hp2	a0001	c0001	t0015	g0002	EAS	JPT	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
NA18941	hp1	a0001	c0001	t0002	g0002	EAS	JPT	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
NA18941	hp2	a0001	c0001	t0002	g0002	EAS	JPT	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
NA18942	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
NA18942	hp2	a0001	c0001	t0002	g0002	EAS	JPT	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
NA18944	hp1	a0001	c0001	t0003	g0003	EAS	JPT	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
NA18944	hp2	a0001	c0002	t0006	g0004	EAS	JPT	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
NA18945	hp1	a0001	c0001	t0004	g0001	EAS	JPT	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
NA18945	hp2	a0001	c0001	t0001	g0001	EAS	JPT	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
NA18946	hp1	a0001	c0001	t0002	g0002	EAS	JPT	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
NA18946	hp2	a0001	c0001	t0001	g0001	EAS	JPT	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
NA18947	hp1	a0001	c0001	t0025	g0003	EAS	JPT	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
NA18947	hp2	a0001	c0001	t0002	g0002	EAS	JPT	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
NA18948	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
NA18948	hp2	a0001	c0001	t0001	g0001	EAS	JPT	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
NA18949	hp1	a0001	c0001	t0013	g0001	EAS	JPT	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
NA18949	hp2	a0001	c0001	t0061	g0006	EAS	JPT	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
NA18950	hp1	a0001	c0001	t0030	g0002	EAS	JPT	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
NA18950	hp2	a0001	c0001	t0001	g0001	EAS	JPT	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
NA18951	hp1	a0001	c0001	t0057	g0001	EAS	JPT	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
NA18951	hp2	a0001	c0001	t0003	g0003	EAS	JPT	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
NA18952	hp1	a0001	c0001	t0003	g0003	EAS	JPT	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
NA18952	hp2	a0001	c0001	t0004	g0001	EAS	JPT	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
NA18953	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
NA18953	hp2	a0001	c0001	t0003	g0003	EAS	JPT	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
NA18954	hp1	a0001	c0001	t0047	g0001	EAS	JPT	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
NA18954	hp2	a0001	c0002	t0034	g0004	EAS	JPT	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
NA18956	hp1	a0001	c0001	t0022	g0003	EAS	JPT	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
NA18956	hp2	a0001	c0001	t0001	g0001	EAS	JPT	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
NA18957	hp1	a0001	c0001	t0024	g0003	EAS	JPT	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
NA18957	hp2	a0001	c0001	t0003	g0003	EAS	JPT	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
NA18959	hp1	a0001	c0001	t0003	g0003	EAS	JPT	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
NA18959	hp2	a0001	c0001	t0002	g0002	EAS	JPT	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
NA18960	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
NA18960	hp2	a0001	c0001	t0001	g0001	EAS	JPT	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
NA18961	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
NA18961	hp2	a0001	c0001	t0002	g0002	EAS	JPT	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
NA18963	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
NA18963	hp2	a0001	c0001	t0004	g0001	EAS	JPT	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
NA18964	hp1	a0001	c0001	t0002	g0002	EAS	JPT	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
NA18964	hp2	a0001	c0001	t0025	g0003	EAS	JPT	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
NA18966	hp1	a0001	c0001	t0002	g0002	EAS	JPT	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
NA18966	hp2	a0001	c0001	t0001	g0001	EAS	JPT	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
NA18967	hp1	a0001	c0001	t0040	g0002	EAS	JPT	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
NA18967	hp2	a0001	c0001	t0001	g0001	EAS	JPT	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
NA18968	hp1	a0001	c0003	t0060	g0005	EAS	JPT	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
NA18968	hp2	a0001	c0001	t0002	g0002	EAS	JPT	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
NA18971	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
NA18971	hp2	a0001	c0001	t0014	g0002	EAS	JPT	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
NA18972	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
NA18972	hp2	a0001	c0001	t0023	g0003	EAS	JPT	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
NA18973	hp1	a0001	c0001	t0009	g0001	EAS	JPT	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
NA18973	hp2	a0001	c0001	t0003	g0003	EAS	JPT	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
NA18974	hp1	a0001	c0001	t0005	g0006	EAS	JPT	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
NA18974	hp2	a0001	c0001	t0001	g0001	EAS	JPT	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
NA18975	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
NA18975	hp2	a0001	c0001	t0027	g0001	EAS	JPT	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
NA18977	hp1	a0001	c0001	t0021	g0017	EAS	JPT	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
NA18977	hp2	a0001	c0001	t0001	g0001	EAS	JPT	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
NA18979	hp1	a0001	c0001	t0022	g0003	EAS	JPT	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
NA18979	hp2	a0001	c0001	t0007	g0001	EAS	JPT	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
NA18980	hp1	a0001	c0001	t0002	g0002	EAS	JPT	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
NA18980	hp2	a0001	c0001	t0001	g0001	EAS	JPT	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
NA18982	hp1	a0001	c0001	t0003	g0003	EAS	JPT	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
NA18982	hp2	a0001	c0001	t0007	g0001	EAS	JPT	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
NA18984	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
NA18984	hp2	a0001	c0001	t0003	g0003	EAS	JPT	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
NA18985	hp1	a0001	c0001	t0015	g0002	EAS	JPT	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
NA18985	hp2	a0001	c0001	t0001	g0001	EAS	JPT	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
NA18986	hp1	a0001	c0001	t0016	g0006	EAS	JPT	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
NA18986	hp2	a0001	c0001	t0025	g0003	EAS	JPT	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
NA18989	hp1	a0001	c0001	t0002	g0002	EAS	JPT	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
NA18989	hp2	a0001	c0001	t0003	g0003	EAS	JPT	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
NA18990	hp1	a0001	c0001	t0002	g0002	EAS	JPT	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
NA18990	hp2	a0001	c0001	t0001	g0001	EAS	JPT	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
NA18993	hp1	a0001	c0001	t0008	g0003	EAS	JPT	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
NA18993	hp2	a0001	c0001	t0001	g0001	EAS	JPT	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
NA18994	hp1	a0001	c0001	t0003	g0003	EAS	JPT	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
NA18994	hp2	a0001	c0001	t0014	g0002	EAS	JPT	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
NA18995	hp1	a0001	c0001	t0005	g0003	EAS	JPT	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
NA18995	hp2	a0001	c0001	t0002	g0015	EAS	JPT	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
NA18997	hp1	a0001	c0001	t0003	g0003	EAS	JPT	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
NA18997	hp2	a0001	c0001	t0023	g0003	EAS	JPT	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
NA18998	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
NA18998	hp2	a0001	c0002	t0006	g0004	EAS	JPT	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
NA18999	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
NA18999	hp2	a0001	c0001	t0003	g0003	EAS	JPT	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
NA19000	hp1	a0001	c0001	t0041	g0001	EAS	JPT	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
NA19000	hp2	a0001	c0001	t0003	g0003	EAS	JPT	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
NA19002	hp1	a0001	c0001	t0003	g0003	EAS	JPT	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
NA19002	hp2	a0001	c0001	t0004	g0001	EAS	JPT	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
NA19003	hp1	a0001	c0001	t0008	g0003	EAS	JPT	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
NA19003	hp2	a0001	c0001	t0001	g0001	EAS	JPT	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
NA19004	hp1	a0001	c0001	t0008	g0006	EAS	JPT	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
NA19004	hp2	a0001	c0001	t0004	g0001	EAS	JPT	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
NA19005	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
NA19005	hp2	a0001	c0001	t0008	g0006	EAS	JPT	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
NA19007	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
NA19007	hp2	a0001	c0001	t0002	g0002	EAS	JPT	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
NA19009	hp1	a0001	c0001	t0002	g0002	EAS	JPT	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
NA19009	hp2	a0001	c0001	t0001	g0001	EAS	JPT	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
NA19010	hp1	a0001	c0001	t0002	g0002	EAS	JPT	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
NA19010	hp2	a0001	c0001	t0003	g0003	EAS	JPT	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
NA19011	hp1	a0001	c0001	t0014	g0002	EAS	JPT	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
NA19011	hp2	a0001	c0002	t0006	g0004	EAS	JPT	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
NA19012	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
NA19012	hp2	a0001	c0001	t0004	g0001	EAS	JPT	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
NA19030	hp1	a0001	c0005	t0069	g0008	AFR	LWK	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
NA19030	hp2	a0001	c0001	t0002	g0002	AFR	LWK	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
NA19043	hp1	a0001	c0001	t0003	g0003	AFR	LWK	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
NA19043	hp2	a0001	c0001	t0035	g0004	AFR	LWK	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
NA19054	hp1	a0001	c0002	t0006	g0004	EAS	JPT	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
NA19054	hp2	a0001	c0001	t0002	g0018	EAS	JPT	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
NA19055	hp1	a0001	c0001	t0058	g0003	EAS	JPT	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
NA19055	hp2	a0001	c0001	t0007	g0001	EAS	JPT	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
NA19057	hp1	a0001	c0001	t0002	g0002	EAS	JPT	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
NA19057	hp2	a0001	c0001	t0001	g0001	EAS	JPT	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
NA19058	hp1	a0001	c0001	t0004	g0001	EAS	JPT	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
NA19058	hp2	a0001	c0001	t0002	g0002	EAS	JPT	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
NA19059	hp1	a0001	c0001	t0005	g0006	EAS	JPT	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
NA19059	hp2	a0001	c0001	t0001	g0001	EAS	JPT	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
NA19060	hp1	a0001	c0001	t0002	g0002	EAS	JPT	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
NA19060	hp2	a0001	c0001	t0002	g0002	EAS	JPT	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
NA19063	hp1	a0001	c0001	t0002	g0002	EAS	JPT	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
NA19063	hp2	a0003	c0008	t0002	g0002	EAS	JPT	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
NA19064	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
NA19064	hp2	a0001	c0003	t0011	g0005	EAS	JPT	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
NA19067	hp1	a0001	c0001	t0002	g0002	EAS	JPT	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
NA19067	hp2	a0001	c0001	t0001	g0001	EAS	JPT	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
NA19068	hp1	a0001	c0001	t0003	g0003	EAS	JPT	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
NA19068	hp2	a0001	c0001	t0009	g0001	EAS	JPT	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
NA19070	hp1	a0001	c0001	t0004	g0001	EAS	JPT	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
NA19070	hp2	a0001	c0001	t0007	g0001	EAS	JPT	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
NA19072	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
NA19072	hp2	a0001	c0003	t0011	g0005	EAS	JPT	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
NA19074	hp1	a0001	c0001	t0002	g0002	EAS	JPT	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
NA19074	hp2	a0001	c0001	t0025	g0003	EAS	JPT	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
NA19076	hp1	a0005	c0007	t0036	g0001	EAS	JPT	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
NA19076	hp2	a0001	c0001	t0030	g0002	EAS	JPT	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
NA19078	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
NA19078	hp2	a0001	c0001	t0010	g0003	EAS	JPT	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
NA19079	hp1	a0001	c0001	t0002	g0002	EAS	JPT	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
NA19079	hp2	a0001	c0001	t0031	g0001	EAS	JPT	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
NA19080	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
NA19080	hp2	a0001	c0001	t0003	g0003	EAS	JPT	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
NA19081	hp1	a0001	c0001	t0024	g0003	EAS	JPT	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
NA19081	hp2	a0001	c0001	t0001	g0001	EAS	JPT	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
NA19083	hp1	a0001	c0001	t0009	g0001	EAS	JPT	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
NA19083	hp2	a0001	c0001	t0009	g0011	EAS	JPT	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
NA19085	hp1	a0001	c0001	t0015	g0002	EAS	JPT	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
NA19085	hp2	a0001	c0001	t0027	g0001	EAS	JPT	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
NA19087	hp1	a0001	c0001	t0031	g0001	EAS	JPT	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
NA19087	hp2	a0001	c0001	t0002	g0002	EAS	JPT	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
NA19088	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
NA19088	hp2	a0001	c0001	t0022	g0003	EAS	JPT	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
NA19090	hp1	a0001	c0001	t0038	g0003	EAS	JPT	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
NA19090	hp2	a0001	c0001	t0002	g0002	EAS	JPT	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
NA19091	hp1	a0001	c0001	t0003	g0003	EAS	JPT	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
NA19091	hp2	a0001	c0001	t0024	g0003	EAS	JPT	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
NA19240	hp1	a0001	c0001	t0001	g0001	AFR	YRI	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
NA19240	hp2	a0001	c0001	t0003	g0001	AFR	YRI	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
NA20129	hp1	a0001	c0001	t0020	g0007	AFR	ASW	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
NA20129	hp2	a0001	c0001	t0002	g0002	AFR	ASW	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
NA20752	hp1	a0001	c0001	t0001	g0001	EUR	TSI	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
NA20752	hp2	a0001	c0001	t0002	g0002	EUR	TSI	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
NA20905	hp1	a0001	c0001	t0002	g0002	SAS	GIH	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
NA20905	hp2	a0001	c0001	t0001	g0001	SAS	GIH	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
HG01123	hp1	a0001	c0001	t0042	g0001	AMR	CLM	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
HG01123	hp2	a0001	c0001	t0002	g0002	AMR	CLM	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
HG02109	hp1	a0001	c0001	t0010	g0001	AFR	ACB	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
HG02109	hp2	a0001	c0004	t0014	g0002	AFR	ACB	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
HG02486	hp1	a0001	c0001	t0004	g0001	AFR	ACB	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
HG02486	hp2	a0001	c0001	t0007	g0001	AFR	ACB	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
HG02559	hp1	a0001	c0001	t0006	g0004	AFR	ACB	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
HG02559	hp2	a0001	c0001	t0007	g0001	AFR	ACB	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
HG03471	hp1	a0001	c0001	t0065	g0004	AFR	MSL	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
HG03471	hp2	a0001	c0001	t0063	g0004	AFR	MSL	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
HG06807	hp1	a0001	c0001	t0021	g0002	AFR	USA	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
HG06807	hp2	a0001	c0001	t0019	g0001	AFR	USA	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
NA18955	hp1	a0001	c0001	t0003	g0003	EAS	JPT	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
NA18955	hp2	a0001	c0001	t0001	g0001	EAS	JPT	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
NA20300	hp1	a0001	c0001	t0008	g0003	AFR	USA	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
NA20300	hp2	a0001	c0001	t0028	g0003	AFR	USA	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
NA21309	hp1	a0001	c0001	t0006	g0004	AFR	LWK	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
NA21309	hp2	a0001	c0002	t0006	g0004	AFR	LWK	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
homoSapiens_chm13v2	hp1	a0001	c0001	t0022	g0003	REF	REF	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071
homoSapiens_grch38	hp1	a0001	c0003	t0005	g0003	REF	REF	SIX3_chr2_44936702_44951071	SIX3	chr2	44936702	44951071

chr:pos	ref	alt	# # of ahapid:amino-acid(protein) level	ahapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	hgvs_p	genename	geneid	featuretype	featureid	transcript_biotype	rank	cdna cdna pos length	cds cds pos length	aa aa pos length	chr	pos
chr2:44944689	C C	A A	1	a0005 a0005	1	NA19076.hp1 NA19076.hp1	missense_variant	MODERATE	c.928C>A c.928C>A	p.Leu310Met p.Leu310Met	SIX3	ENSG00000138083.5	transcript	ENST00000260653.5	protein_coding	2/2	1331/2713	928/999	310/332	chr2	44944689
chr2:44944719	A A	C C	1	a0004 a0004	1	HG02615.hp1 HG02615.hp1	missense_variant	MODERATE	c.958A>C c.958A>C	p.Ile320Leu p.Ile320Leu	SIX3	ENSG00000138083.5	transcript	ENST00000260653.5	protein_coding	2/2	1361/2713	958/999	320/332	chr2	44944719
chr2:44944722	C C	G G	1	a0003 a0003	1	NA19063.hp2 NA19063.hp2	missense_variant	MODERATE	c.961C>G c.961C>G	p.Leu321Val p.Leu321Val	SIX3	ENSG00000138083.5	transcript	ENST00000260653.5	protein_coding	2/2	1364/2713	961/999	321/332	chr2	44944722
chr2:44944722	C C	T T	1	a0002 a0002	1	HG01496.hp1 HG01496.hp1	missense_variant	MODERATE	c.961C>T c.961C>T	p.Leu321Phe p.Leu321Phe	SIX3	ENSG00000138083.5	transcript	ENST00000260653.5	protein_coding	2/2	1364/2713	961/999	321/332	chr2	44944722

chr:pos	ref	alt	# # of chapid	chapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	hgvs_p	genename	geneid	featuretype	featureid	transcript_biotype	rank	cdna cdna pos length	cds cds pos length	aa aa pos length	chr	pos
chr2:44942194	G G	T T	2	a0001c0002 a0001c0011 a0001c0002 a0001c0011	16	HG00423.hp2 HG00597.hp2 HG00733.hp1 others(13): Show HG00423.hp2 HG00597.hp2 HG00733.hp1 HG01168.hp1 HG01257.hp2 HG01516.hp2 HG01975.hp1 HG02300.hp2 HG02698.hp2 HG04199.hp2 NA18944.hp2 NA18954.hp2 NA18998.hp2 NA19011.hp2 NA19054.hp1 NA21309.hp2	synonymous_variant	LOW	c.90G>T c.90G>T	p.Ala30Ala p.Ala30Ala	SIX3	ENSG00000138083.5	transcript	ENST00000260653.5	protein_coding	1/2	493/2713	90/999	30/332	chr2	44942194
chr2:44942293	C C	A A	1	a0001c0006 a0001c0006	1	HG02004.hp2 HG02004.hp2	synonymous_variant	LOW	c.189C>A c.189C>A	p.Gly63Gly p.Gly63Gly	SIX3	ENSG00000138083.5	transcript	ENST00000260653.5	protein_coding	1/2	592/2713	189/999	63/332	chr2	44942293
chr2:44942629	G G	A A	1	a0001c0004 a0001c0004	6	HG00738.hp1 HG01346.hp2 HG02055.hp2 others(3): Show HG00738.hp1 HG01346.hp2 HG02055.hp2 HG02109.hp2 HG02976.hp1 HG03516.hp1	synonymous_variant	LOW	c.525G>A c.525G>A	p.Gln175Gln p.Gln175Gln	SIX3	ENSG00000138083.5	transcript	ENST00000260653.5	protein_coding	1/2	928/2713	525/999	175/332	chr2	44942629
chr2:44942656	A A	G G	1	a0001c0011 a0001c0011	1	HG01168.hp1 HG01168.hp1	synonymous_variant	LOW	c.552A>G c.552A>G	p.Pro184Pro p.Pro184Pro	SIX3	ENSG00000138083.5	transcript	ENST00000260653.5	protein_coding	1/2	955/2713	552/999	184/332	chr2	44942656
chr2:44942680	C C	T T	1	a0001c0005 a0001c0005	4	HG02809.hp1 HG02976.hp2 HG03654.hp1 others(1): Show HG02809.hp1 HG02976.hp2 HG03654.hp1 NA19030.hp1	synonymous_variant	LOW	c.576C>T c.576C>T	p.Arg192Arg p.Arg192Arg	SIX3	ENSG00000138083.5	transcript	ENST00000260653.5	protein_coding	1/2	979/2713	576/999	192/332	chr2	44942680
chr2:44944703	A A	G G	9	a0001c0001 a0001c0002 a0001c0004 others(6): Show a0001c0001 a0001c0002 a0001c0004 a0001c0006 a0001c0011 a0002c0009 a0003c0008 a0004c0010 a0005c0007	430	HG00099.hp1 HG00099.hp2 HG00140.hp1 others(427): Show HG00099.hp1 HG00099.hp2 HG00140.hp1 HG00140.hp2 HG00280.hp1 HG00280.hp2 HG00323.hp1 HG00323.hp2 HG00423.hp1 HG00423.hp2 HG00438.hp1 HG00438.hp2 HG00544.hp1 HG00544.hp2 HG00558.hp1 HG00558.hp2 HG00597.hp1 HG00597.hp2 HG00609.hp1 HG00609.hp2 HG00639.hp1 HG00639.hp2 HG00642.hp1 HG00642.hp2 HG00673.hp1 HG00673.hp2 HG00733.hp1 HG00733.hp2 HG00735.hp1 HG00735.hp2 HG00738.hp1 HG00738.hp2 HG00741.hp1 HG01069.hp1 HG01069.hp2 HG01070.hp1 HG01071.hp1 HG01071.hp2 HG01074.hp1 HG01074.hp2 HG01081.hp1 HG01081.hp2 HG01099.hp1 HG01099.hp2 HG01106.hp1 HG01106.hp2 HG01109.hp1 HG01109.hp2 HG01123.hp1 HG01123.hp2 HG01167.hp2 HG01168.hp1 HG01168.hp2 HG01169.hp2 HG01192.hp1 HG01192.hp2 HG01243.hp1 HG01243.hp2 HG01255.hp1 HG01255.hp2 HG01256.hp1 HG01256.hp2 HG01257.hp1 HG01257.hp2 HG01258.hp1 HG01258.hp2 HG01261.hp2 HG01346.hp1 HG01346.hp2 HG01358.hp1 HG01358.hp2 HG01433.hp1 HG01433.hp2 HG01496.hp1 HG01496.hp2 HG01515.hp1 HG01515.hp2 HG01516.hp1 HG01516.hp2 HG01517.hp1 HG01517.hp2 HG01884.hp1 HG01884.hp2 HG01891.hp1 HG01891.hp2 HG01934.hp1 HG01934.hp2 HG01943.hp1 HG01943.hp2 HG01952.hp2 HG01975.hp1 HG01975.hp2 HG01978.hp1 HG01978.hp2 HG01981.hp1 HG01981.hp2 HG01993.hp1 HG01993.hp2 HG02004.hp1 HG02004.hp2 HG02015.hp1 HG02015.hp2 HG02027.hp1 HG02027.hp2 HG02040.hp1 HG02040.hp2 HG02055.hp1 HG02055.hp2 HG02056.hp1 HG02056.hp2 HG02071.hp1 HG02071.hp2 HG02074.hp1 HG02074.hp2 HG02080.hp1 HG02080.hp2 HG02083.hp1 HG02083.hp2 HG02109.hp1 HG02109.hp2 HG02129.hp1 HG02129.hp2 HG02132.hp1 HG02132.hp2 HG02135.hp1 HG02135.hp2 HG02145.hp1 HG02145.hp2 HG02148.hp1 HG02148.hp2 HG02155.hp1 HG02155.hp2 HG02165.hp1 HG02165.hp2 HG02257.hp1 HG02257.hp2 HG02258.hp1 HG02258.hp2 HG02273.hp1 HG02273.hp2 HG02280.hp1 HG02280.hp2 HG02300.hp1 HG02300.hp2 HG02451.hp1 HG02451.hp2 HG02486.hp1 HG02486.hp2 HG02559.hp1 HG02559.hp2 HG02572.hp1 HG02572.hp2 HG02602.hp1 HG02602.hp2 HG02615.hp1 HG02615.hp2 HG02622.hp1 HG02622.hp2 HG02630.hp1 HG02630.hp2 HG02647.hp1 HG02647.hp2 HG02683.hp1 HG02683.hp2 HG02698.hp1 HG02698.hp2 HG02717.hp1 HG02717.hp2 HG02723.hp1 HG02723.hp2 HG02735.hp2 HG02738.hp1 HG02738.hp2 HG02809.hp2 HG02818.hp1 HG02818.hp2 HG02886.hp1 HG02886.hp2 HG02895.hp1 HG02895.hp2 HG02896.hp1 HG02896.hp2 HG02897.hp1 HG02897.hp2 HG02922.hp1 HG02922.hp2 HG02965.hp1 HG02965.hp2 HG02970.hp1 HG02970.hp2 HG02976.hp1 HG03017.hp1 HG03017.hp2 HG03041.hp1 HG03041.hp2 HG03098.hp1 HG03098.hp2 HG03130.hp1 HG03130.hp2 HG03139.hp1 HG03139.hp2 HG03195.hp1 HG03195.hp2 HG03209.hp1 HG03209.hp2 HG03225.hp1 HG03225.hp2 HG03239.hp1 HG03239.hp2 HG03453.hp1 HG03453.hp2 HG03471.hp1 HG03471.hp2 HG03486.hp1 HG03486.hp2 HG03491.hp1 HG03491.hp2 HG03492.hp1 HG03492.hp2 HG03516.hp1 HG03516.hp2 HG03540.hp1 HG03540.hp2 HG03579.hp1 HG03579.hp2 HG03654.hp2 HG03669.hp1 HG03669.hp2 HG03688.hp1 HG03688.hp2 HG03704.hp1 HG03704.hp2 HG03710.hp1 HG03831.hp2 HG03834.hp1 HG03834.hp2 HG03942.hp1 HG03942.hp2 HG04115.hp1 HG04115.hp2 HG04184.hp1 HG04184.hp2 HG04199.hp1 HG04199.hp2 HG04204.hp2 HG04228.hp1 HG04228.hp2 HG06807.hp1 HG06807.hp2 NA18522.hp1 NA18522.hp2 NA18612.hp1 NA18612.hp2 NA18747.hp1 NA18747.hp2 NA18906.hp1 NA18906.hp2 NA18939.hp1 NA18939.hp2 NA18940.hp1 NA18940.hp2 NA18941.hp1 NA18941.hp2 NA18942.hp1 NA18942.hp2 NA18944.hp1 NA18944.hp2 NA18945.hp1 NA18945.hp2 NA18946.hp1 NA18946.hp2 NA18947.hp1 NA18947.hp2 NA18948.hp1 NA18948.hp2 NA18949.hp1 NA18949.hp2 NA18950.hp1 NA18950.hp2 NA18951.hp1 NA18951.hp2 NA18952.hp1 NA18952.hp2 NA18953.hp1 NA18953.hp2 NA18954.hp1 NA18954.hp2 NA18955.hp1 NA18955.hp2 NA18956.hp1 NA18956.hp2 NA18957.hp1 NA18957.hp2 NA18959.hp1 NA18959.hp2 NA18960.hp1 NA18960.hp2 NA18961.hp1 NA18961.hp2 NA18963.hp1 NA18963.hp2 NA18964.hp1 NA18964.hp2 NA18966.hp1 NA18966.hp2 NA18967.hp1 NA18967.hp2 NA18968.hp2 NA18971.hp1 NA18971.hp2 NA18972.hp1 NA18972.hp2 NA18973.hp1 NA18973.hp2 NA18974.hp1 NA18974.hp2 NA18975.hp1 NA18975.hp2 NA18977.hp1 NA18977.hp2 NA18979.hp1 NA18979.hp2 NA18980.hp1 NA18980.hp2 NA18982.hp1 NA18982.hp2 NA18984.hp1 NA18984.hp2 NA18985.hp1 NA18985.hp2 NA18986.hp1 NA18986.hp2 NA18989.hp1 NA18989.hp2 NA18990.hp1 NA18990.hp2 NA18993.hp1 NA18993.hp2 NA18994.hp1 NA18994.hp2 NA18995.hp1 NA18995.hp2 NA18997.hp1 NA18997.hp2 NA18998.hp1 NA18998.hp2 NA18999.hp1 NA18999.hp2 NA19000.hp1 NA19000.hp2 NA19002.hp1 NA19002.hp2 NA19003.hp1 NA19003.hp2 NA19004.hp1 NA19004.hp2 NA19005.hp1 NA19005.hp2 NA19007.hp1 NA19007.hp2 NA19009.hp1 NA19009.hp2 NA19010.hp1 NA19010.hp2 NA19011.hp1 NA19011.hp2 NA19012.hp1 NA19012.hp2 NA19030.hp2 NA19043.hp1 NA19043.hp2 NA19054.hp1 NA19054.hp2 NA19055.hp1 NA19055.hp2 NA19057.hp1 NA19057.hp2 NA19058.hp1 NA19058.hp2 NA19059.hp1 NA19059.hp2 NA19060.hp1 NA19060.hp2 NA19063.hp1 NA19063.hp2 NA19064.hp1 NA19067.hp1 NA19067.hp2 NA19068.hp1 NA19068.hp2 NA19070.hp1 NA19070.hp2 NA19072.hp1 NA19074.hp1 NA19074.hp2 NA19076.hp1 NA19076.hp2 NA19078.hp1 NA19078.hp2 NA19079.hp1 NA19079.hp2 NA19080.hp1 NA19080.hp2 NA19081.hp1 NA19081.hp2 NA19083.hp1 NA19083.hp2 NA19085.hp1 NA19085.hp2 NA19087.hp1 NA19087.hp2 NA19088.hp1 NA19088.hp2 NA19090.hp1 NA19090.hp2 NA19091.hp1 NA19091.hp2 NA19240.hp1 NA19240.hp2 NA20129.hp1 NA20129.hp2 NA20300.hp1 NA20300.hp2 NA20752.hp1 NA20752.hp2 NA20905.hp1 NA20905.hp2 NA21309.hp1 NA21309.hp2 homoSapiens_chm13v2.hp1	synonymous_variant	LOW	c.942A>G c.942A>G	p.Ala314Ala p.Ala314Ala	SIX3	ENSG00000138083.5	transcript	ENST00000260653.5	protein_coding	2/2	1345/2713	942/999	314/332	chr2	44944703

chr:pos	ref	alt	# # of thapid:transcript level	thapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	pos
chr2:44941797	C C	G G	1	a0001c0005t0069 a0001c0005t0069	1	NA19030.hp1 NA19030.hp1	5_prime_UTR_premature_start_codon_gain_variant	LOW	c.-308C>G c.-308C>G	SIX3	ENSG00000138083.5	transcript	ENST00000260653.5	protein_coding	1/2			chr2	44941797
chr2:44941807	TCTCTCC TCTCTCC	T T	17	a0001c0001t0006 a0001c0001t0029 a0001c0001t0034 others(14): Show a0001c0001t0006 a0001c0001t0029 a0001c0001t0034 a0001c0001t0035 a0001c0001t0062 a0001c0001t0063 a0001c0001t0064 a0001c0001t0065 a0001c0001t0067 a0001c0002t0006 a0001c0002t0034 a0001c0002t0066 a0001c0005t0033 a0001c0005t0068 a0001c0005t0069 a0001c0011t0006 a0004c0010t0029	37	HG00423.hp2 HG00597.hp2 HG00733.hp1 others(34): Show HG00423.hp2 HG00597.hp2 HG00733.hp1 HG01168.hp1 HG01257.hp2 HG01516.hp2 HG01975.hp1 HG02300.hp2 HG02451.hp1 HG02559.hp1 HG02615.hp1 HG02698.hp2 HG02717.hp2 HG02809.hp1 HG02818.hp1 HG02886.hp2 HG02895.hp1 HG02970.hp2 HG02976.hp2 HG03098.hp1 HG03098.hp2 HG03209.hp2 HG03453.hp2 HG03471.hp1 HG03471.hp2 HG03486.hp2 HG03654.hp1 HG04199.hp2 NA18944.hp2 NA18954.hp2 NA18998.hp2 NA19011.hp2 NA19030.hp1 NA19043.hp2 NA19054.hp1 NA21309.hp1 NA21309.hp2	5_prime_UTR_variant	MODIFIER	c.-280_-275delCCTCTC c.-280_-275delCCTCTC	SIX3	ENSG00000138083.5	transcript	ENST00000260653.5	protein_coding	1/2	275	INFO_REALIGN_3_PRIME	chr2	44941807
chr2:44942010	C C	T T	1	a0001c0001t0061 a0001c0001t0061	1	NA18949.hp2 NA18949.hp2	5_prime_UTR_variant	MODIFIER	c.-95C>T c.-95C>T	SIX3	ENSG00000138083.5	transcript	ENST00000260653.5	protein_coding	1/2	95		chr2	44942010
chr2:44942011	T T	C C	1	a0001c0001t0061 a0001c0001t0061	1	NA18949.hp2 NA18949.hp2	5_prime_UTR_variant	MODIFIER	c.-94T>C c.-94T>C	SIX3	ENSG00000138083.5	transcript	ENST00000260653.5	protein_coding	1/2	94		chr2	44942011
chr2:44942086	T T	A A	1	a0005c0007t0036 a0005c0007t0036	1	NA19076.hp1 NA19076.hp1	5_prime_UTR_variant	MODIFIER	c.-19T>A c.-19T>A	SIX3	ENSG00000138083.5	transcript	ENST00000260653.5	protein_coding	1/2	19		chr2	44942086
chr2:44944928	C C	A A	1	a0005c0007t0036 a0005c0007t0036	1	NA19076.hp1 NA19076.hp1	3_prime_UTR_variant	MODIFIER	c.168C>A c.168C>A	SIX3	ENSG00000138083.5	transcript	ENST00000260653.5	protein_coding	2/2	168		chr2	44944928
chr2:44945039	C C	G G	1	a0001c0003t0060 a0001c0003t0060	1	NA18968.hp1 NA18968.hp1	3_prime_UTR_variant	MODIFIER	c.279C>G c.279C>G	SIX3	ENSG00000138083.5	transcript	ENST00000260653.5	protein_coding	2/2	279		chr2	44945039
chr2:44945087	C C	A A	1	a0001c0001t0037 a0001c0001t0037	1	NA18612.hp1 NA18612.hp1	3_prime_UTR_variant	MODIFIER	c.327C>A c.327C>A	SIX3	ENSG00000138083.5	transcript	ENST00000260653.5	protein_coding	2/2	327		chr2	44945087
chr2:44945119	C C	T T	6	a0001c0003t0011 a0001c0003t0032 a0001c0003t0059 others(3): Show a0001c0003t0011 a0001c0003t0032 a0001c0003t0059 a0001c0003t0060 a0001c0005t0068 a0001c0005t0069	15	HG00741.hp2 HG01070.hp2 HG01167.hp1 others(12): Show HG00741.hp2 HG01070.hp2 HG01167.hp1 HG01169.hp1 HG01261.hp1 HG01952.hp1 HG02735.hp1 HG02976.hp2 HG03710.hp2 HG03831.hp1 HG04204.hp1 NA18968.hp1 NA19030.hp1 NA19064.hp2 NA19072.hp2	3_prime_UTR_variant	MODIFIER	c.359C>T c.359C>T	SIX3	ENSG00000138083.5	transcript	ENST00000260653.5	protein_coding	2/2	359		chr2	44945119
chr2:44945215	C C	G G	1	a0001c0001t0058 a0001c0001t0058	1	NA19055.hp1 NA19055.hp1	3_prime_UTR_variant	MODIFIER	c.455C>G c.455C>G	SIX3	ENSG00000138083.5	transcript	ENST00000260653.5	protein_coding	2/2	455		chr2	44945215
chr2:44945254	G G	A A	1	a0001c0001t0019 a0001c0001t0019	4	HG02145.hp1 HG02145.hp2 HG02258.hp1 others(1): Show HG02145.hp1 HG02145.hp2 HG02258.hp1 HG06807.hp2	3_prime_UTR_variant	MODIFIER	c.494G>A c.494G>A	SIX3	ENSG00000138083.5	transcript	ENST00000260653.5	protein_coding	2/2	494		chr2	44945254
chr2:44945310	TA TA	T T	10	a0001c0001t0008 a0001c0001t0029 a0001c0001t0039 others(7): Show a0001c0001t0008 a0001c0001t0029 a0001c0001t0039 a0001c0001t0040 a0001c0001t0041 a0001c0001t0065 a0001c0003t0011 a0001c0003t0060 a0001c0005t0069 a0004c0010t0029	31	HG00099.hp1 HG00099.hp2 HG00323.hp1 others(28): Show HG00099.hp1 HG00099.hp2 HG00323.hp1 HG00741.hp2 HG01074.hp1 HG01074.hp2 HG01099.hp1 HG01167.hp1 HG01167.hp2 HG01169.hp1 HG01261.hp1 HG01517.hp2 HG01952.hp1 HG02615.hp1 HG02886.hp2 HG02895.hp1 HG03471.hp1 HG03710.hp2 HG03831.hp1 HG03942.hp1 NA18967.hp1 NA18968.hp1 NA18993.hp1 NA19000.hp1 NA19003.hp1 NA19004.hp1 NA19005.hp2 NA19030.hp1 NA19064.hp2 NA19072.hp2 NA20300.hp1	3_prime_UTR_variant	MODIFIER	c.576delA c.576delA	SIX3	ENSG00000138083.5	transcript	ENST00000260653.5	protein_coding	2/2	576	INFO_REALIGN_3_PRIME	chr2	44945310
chr2:44945310	TAA TAA	T T	14	a0001c0001t0006 a0001c0001t0009 a0001c0001t0013 others(11): Show a0001c0001t0006 a0001c0001t0009 a0001c0001t0013 a0001c0001t0015 a0001c0001t0016 a0001c0001t0017 a0001c0001t0030 a0001c0001t0042 a0001c0001t0043 a0001c0001t0044 a0001c0002t0006 a0001c0002t0066 a0001c0003t0059 a0001c0011t0006	61	HG00140.hp2 HG00423.hp2 HG00597.hp2 others(58): Show HG00140.hp2 HG00423.hp2 HG00597.hp2 HG00639.hp1 HG00733.hp1 HG01069.hp1 HG01070.hp2 HG01071.hp2 HG01081.hp1 HG01106.hp2 HG01123.hp1 HG01168.hp1 HG01257.hp1 HG01257.hp2 HG01258.hp2 HG01516.hp2 HG01934.hp2 HG01943.hp2 HG01952.hp2 HG01975.hp1 HG01975.hp2 HG01993.hp2 HG02015.hp2 HG02148.hp1 HG02273.hp1 HG02273.hp2 HG02300.hp1 HG02300.hp2 HG02559.hp1 HG02630.hp1 HG02647.hp2 HG02698.hp2 HG02717.hp2 HG02809.hp2 HG02970.hp2 HG03209.hp2 HG03486.hp2 HG03491.hp2 HG03669.hp2 HG03688.hp1 HG04115.hp1 HG04115.hp2 HG04199.hp2 HG04228.hp2 NA18940.hp2 NA18944.hp2 NA18949.hp1 NA18950.hp1 NA18973.hp1 NA18985.hp1 NA18986.hp1 NA18998.hp2 NA19011.hp2 NA19054.hp1 NA19068.hp2 NA19076.hp2 NA19083.hp1 NA19083.hp2 NA19085.hp1 NA21309.hp1 NA21309.hp2	3_prime_UTR_variant	MODIFIER	c.575_576delAA c.575_576delAA	SIX3	ENSG00000138083.5	transcript	ENST00000260653.5	protein_coding	2/2	575	INFO_REALIGN_3_PRIME	chr2	44945310
chr2:44945310	TAAA TAAA	T T	24	a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 others(21): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 a0001c0001t0018 a0001c0001t0019 a0001c0001t0020 a0001c0001t0021 a0001c0001t0026 a0001c0001t0031 a0001c0001t0034 a0001c0001t0037 a0001c0001t0045 a0001c0001t0046 a0001c0001t0047 a0001c0001t0048 a0001c0001t0049 a0001c0001t0050 a0001c0001t0053 a0001c0002t0034 a0001c0004t0002 a0001c0004t0026 a0001c0006t0002 a0003c0008t0002 a0005c0007t0036	220	HG00140.hp1 HG00280.hp1 HG00280.hp2 others(217): Show HG00140.hp1 HG00280.hp1 HG00280.hp2 HG00323.hp2 HG00423.hp1 HG00438.hp1 HG00438.hp2 HG00544.hp1 HG00544.hp2 HG00558.hp1 HG00597.hp1 HG00609.hp1 HG00639.hp2 HG00642.hp2 HG00673.hp1 HG00735.hp2 HG00738.hp1 HG00738.hp2 HG00741.hp1 HG01070.hp1 HG01071.hp1 HG01081.hp2 HG01109.hp1 HG01109.hp2 HG01123.hp2 HG01168.hp2 HG01169.hp2 HG01243.hp1 HG01255.hp2 HG01258.hp1 HG01346.hp2 HG01358.hp2 HG01433.hp1 HG01515.hp2 HG01516.hp1 HG01517.hp1 HG01934.hp1 HG01943.hp1 HG01978.hp1 HG01978.hp2 HG01981.hp1 HG01981.hp2 HG01993.hp1 HG02004.hp1 HG02004.hp2 HG02015.hp1 HG02027.hp1 HG02027.hp2 HG02040.hp1 HG02040.hp2 HG02055.hp1 HG02056.hp1 HG02056.hp2 HG02071.hp1 HG02071.hp2 HG02074.hp1 HG02074.hp2 HG02080.hp1 HG02083.hp2 HG02129.hp1 HG02129.hp2 HG02132.hp1 HG02132.hp2 HG02135.hp2 HG02145.hp1 HG02145.hp2 HG02148.hp2 HG02155.hp2 HG02165.hp2 HG02257.hp2 HG02258.hp1 HG02280.hp2 HG02451.hp2 HG02486.hp1 HG02572.hp1 HG02602.hp1 HG02615.hp2 HG02630.hp2 HG02647.hp1 HG02683.hp2 HG02698.hp1 HG02723.hp2 HG02738.hp1 HG02738.hp2 HG02896.hp1 HG02897.hp2 HG02922.hp2 HG02965.hp1 HG02970.hp1 HG03017.hp1 HG03017.hp2 HG03041.hp2 HG03130.hp1 HG03139.hp1 HG03139.hp2 HG03195.hp1 HG03195.hp2 HG03225.hp1 HG03225.hp2 HG03239.hp1 HG03239.hp2 HG03453.hp1 HG03453.hp2 HG03491.hp1 HG03492.hp1 HG03492.hp2 HG03516.hp1 HG03579.hp1 HG03669.hp1 HG03688.hp2 HG03704.hp1 HG03710.hp1 HG03831.hp2 HG03834.hp1 HG03834.hp2 HG03942.hp2 HG04184.hp1 HG04199.hp1 HG04204.hp2 HG04228.hp1 HG06807.hp1 HG06807.hp2 NA18522.hp2 NA18612.hp1 NA18612.hp2 NA18747.hp1 NA18906.hp1 NA18906.hp2 NA18941.hp1 NA18941.hp2 NA18942.hp1 NA18942.hp2 NA18945.hp1 NA18945.hp2 NA18946.hp1 NA18946.hp2 NA18947.hp2 NA18948.hp1 NA18948.hp2 NA18950.hp2 NA18952.hp2 NA18953.hp1 NA18954.hp1 NA18954.hp2 NA18955.hp2 NA18956.hp2 NA18959.hp2 NA18960.hp1 NA18960.hp2 NA18961.hp1 NA18961.hp2 NA18963.hp1 NA18963.hp2 NA18964.hp1 NA18966.hp1 NA18966.hp2 NA18967.hp2 NA18968.hp2 NA18971.hp1 NA18972.hp1 NA18974.hp2 NA18975.hp1 NA18977.hp1 NA18977.hp2 NA18980.hp1 NA18980.hp2 NA18984.hp1 NA18985.hp2 NA18989.hp1 NA18990.hp1 NA18990.hp2 NA18993.hp2 NA18995.hp2 NA18998.hp1 NA18999.hp1 NA19002.hp2 NA19003.hp2 NA19004.hp2 NA19005.hp1 NA19007.hp1 NA19007.hp2 NA19009.hp1 NA19009.hp2 NA19010.hp1 NA19012.hp1 NA19012.hp2 NA19030.hp2 NA19054.hp2 NA19057.hp1 NA19057.hp2 NA19058.hp1 NA19058.hp2 NA19059.hp2 NA19060.hp1 NA19060.hp2 NA19063.hp1 NA19063.hp2 NA19064.hp1 NA19067.hp1 NA19067.hp2 NA19070.hp1 NA19072.hp1 NA19074.hp1 NA19076.hp1 NA19078.hp1 NA19079.hp1 NA19079.hp2 NA19080.hp1 NA19081.hp2 NA19087.hp1 NA19087.hp2 NA19088.hp1 NA19090.hp2 NA19240.hp1 NA20129.hp1 NA20129.hp2 NA20752.hp1 NA20752.hp2 NA20905.hp1 NA20905.hp2	3_prime_UTR_variant	MODIFIER	c.574_576delAAA c.574_576delAAA	SIX3	ENSG00000138083.5	transcript	ENST00000260653.5	protein_coding	2/2	574	INFO_REALIGN_3_PRIME	chr2	44945310
chr2:44945310	TAAAA TAAAA	T T	9	a0001c0001t0007 a0001c0001t0010 a0001c0001t0012 others(6): Show a0001c0001t0007 a0001c0001t0010 a0001c0001t0012 a0001c0001t0014 a0001c0001t0027 a0001c0001t0035 a0001c0001t0051 a0001c0001t0052 a0001c0004t0014	48	HG00642.hp1 HG01099.hp2 HG01106.hp1 others(45): Show HG00642.hp1 HG01099.hp2 HG01106.hp1 HG01256.hp1 HG01884.hp1 HG01884.hp2 HG01891.hp1 HG02055.hp2 HG02083.hp1 HG02109.hp1 HG02109.hp2 HG02280.hp1 HG02486.hp2 HG02559.hp2 HG02572.hp2 HG02622.hp1 HG02683.hp1 HG02717.hp1 HG02723.hp1 HG02818.hp1 HG02818.hp2 HG02886.hp1 HG02895.hp2 HG02896.hp2 HG02897.hp1 HG02922.hp1 HG02965.hp2 HG02976.hp1 HG03041.hp1 HG03209.hp1 HG03486.hp1 HG03516.hp2 HG03540.hp1 HG03540.hp2 HG03579.hp2 HG03704.hp2 NA18939.hp2 NA18971.hp2 NA18975.hp2 NA18979.hp2 NA18982.hp2 NA18994.hp2 NA19011.hp1 NA19043.hp2 NA19055.hp2 NA19070.hp2 NA19078.hp2 NA19085.hp2	3_prime_UTR_variant	MODIFIER	c.573_576delAAAA c.573_576delAAAA	SIX3	ENSG00000138083.5	transcript	ENST00000260653.5	protein_coding	2/2	573	INFO_REALIGN_3_PRIME	chr2	44945310
chr2:44945310	TAAAAA TAAAAA	T T	7	a0001c0001t0003 a0001c0001t0022 a0001c0001t0023 others(4): Show a0001c0001t0003 a0001c0001t0022 a0001c0001t0023 a0001c0001t0028 a0001c0001t0054 a0001c0001t0055 a0001c0001t0067	47	HG00558.hp2 HG00609.hp2 HG00673.hp2 others(44): Show HG00558.hp2 HG00609.hp2 HG00673.hp2 HG01243.hp2 HG02080.hp2 HG02135.hp1 HG02165.hp1 HG02257.hp1 HG02451.hp1 HG02602.hp2 HG02622.hp2 HG02735.hp2 HG03130.hp2 HG03654.hp2 HG04184.hp2 NA18747.hp2 NA18939.hp1 NA18940.hp1 NA18944.hp1 NA18951.hp2 NA18952.hp1 NA18953.hp2 NA18955.hp1 NA18956.hp1 NA18957.hp2 NA18959.hp1 NA18972.hp2 NA18973.hp2 NA18979.hp1 NA18982.hp1 NA18984.hp2 NA18989.hp2 NA18994.hp1 NA18997.hp1 NA18997.hp2 NA18999.hp2 NA19000.hp2 NA19002.hp1 NA19010.hp2 NA19043.hp1 NA19068.hp1 NA19080.hp2 NA19088.hp2 NA19091.hp1 NA19240.hp2 NA20300.hp2 homoSapiens_chm13v2.hp1	3_prime_UTR_variant	MODIFIER	c.572_576delAAAAA c.572_576delAAAAA	SIX3	ENSG00000138083.5	transcript	ENST00000260653.5	protein_coding	2/2	572	INFO_REALIGN_3_PRIME	chr2	44945310
chr2:44945310	TAAAAAA TAAAAAA	T T	4	a0001c0001t0024 a0001c0001t0025 a0001c0001t0056 others(1): Show a0001c0001t0024 a0001c0001t0025 a0001c0001t0056 a0001c0001t0058	10	HG02155.hp1 NA18522.hp1 NA18947.hp1 others(7): Show HG02155.hp1 NA18522.hp1 NA18947.hp1 NA18957.hp1 NA18964.hp2 NA18986.hp2 NA19055.hp1 NA19074.hp2 NA19081.hp1 NA19091.hp2	3_prime_UTR_variant	MODIFIER	c.571_576delAAAAAA c.571_576delAAAAAA	SIX3	ENSG00000138083.5	transcript	ENST00000260653.5	protein_coding	2/2	571	INFO_REALIGN_3_PRIME	chr2	44945310
chr2:44945310	TAAAAAAA others(10): Show TAAAAAAAAAAAAAAAAA	T T	1	a0001c0001t0057 a0001c0001t0057	1	NA18951.hp1 NA18951.hp1	3_prime_UTR_variant	MODIFIER	c.560_576delAAAAAA others(11): Show c.560_576delAAAAAAAAAAAAAAAAA	SIX3	ENSG00000138083.5	transcript	ENST00000260653.5	protein_coding	2/2	560	INFO_REALIGN_3_PRIME	chr2	44945310
chr2:44945336	A A	G G	1	a0001c0001t0053 a0001c0001t0053	1	HG02027.hp2 HG02027.hp2	3_prime_UTR_variant	MODIFIER	c.576A>G c.576A>G	SIX3	ENSG00000138083.5	transcript	ENST00000260653.5	protein_coding	2/2	576		chr2	44945336
chr2:44945340	C C	T T	7	a0001c0001t0004 a0001c0001t0013 a0001c0001t0027 others(4): Show a0001c0001t0004 a0001c0001t0013 a0001c0001t0027 a0001c0001t0041 a0001c0001t0050 a0001c0001t0057 a0005c0007t0036	37	HG00639.hp2 HG01070.hp1 HG01071.hp1 others(34): Show HG00639.hp2 HG01070.hp1 HG01071.hp1 HG01106.hp2 HG01978.hp2 HG01993.hp2 HG02040.hp2 HG02071.hp1 HG02074.hp2 HG02083.hp1 HG02132.hp2 HG02148.hp1 HG02273.hp2 HG02280.hp2 HG02300.hp1 HG02486.hp1 HG02809.hp2 HG03017.hp2 HG03492.hp1 HG03688.hp2 HG03704.hp1 HG04228.hp1 NA18612.hp2 NA18945.hp1 NA18949.hp1 NA18951.hp1 NA18952.hp2 NA18963.hp2 NA18975.hp2 NA19000.hp1 NA19002.hp2 NA19004.hp2 NA19012.hp2 NA19058.hp1 NA19070.hp1 NA19076.hp1 NA19085.hp2	3_prime_UTR_variant	MODIFIER	c.580C>T c.580C>T	SIX3	ENSG00000138083.5	transcript	ENST00000260653.5	protein_coding	2/2	580		chr2	44945340
chr2:44945340	CA CA	C C	2	a0001c0001t0030 a0001c0001t0040 a0001c0001t0030 a0001c0001t0040	3	NA18950.hp1 NA18967.hp1 NA19076.hp2 NA18950.hp1 NA18967.hp1 NA19076.hp2	3_prime_UTR_variant	MODIFIER	c.581delA c.581delA	SIX3	ENSG00000138083.5	transcript	ENST00000260653.5	protein_coding	2/2	581		chr2	44945340
chr2:44945340	CAG CAG	C C	3	a0001c0001t0017 a0001c0001t0048 a0001c0001t0049 a0001c0001t0017 a0001c0001t0048 a0001c0001t0049	7	HG01934.hp2 HG01943.hp2 HG01952.hp2 others(4): Show HG01934.hp2 HG01943.hp2 HG01952.hp2 HG01975.hp2 HG01993.hp1 HG02273.hp1 HG03669.hp1	3_prime_UTR_variant	MODIFIER	c.581_582delAG c.581_582delAG	SIX3	ENSG00000138083.5	transcript	ENST00000260653.5	protein_coding	2/2	581		chr2	44945340
chr2:44945345	G G	A A	1	a0001c0001t0020 a0001c0001t0020	4	HG01081.hp2 HG03130.hp1 HG03453.hp1 others(1): Show HG01081.hp2 HG03130.hp1 HG03453.hp1 NA20129.hp1	3_prime_UTR_variant	MODIFIER	c.585G>A c.585G>A	SIX3	ENSG00000138083.5	transcript	ENST00000260653.5	protein_coding	2/2	585		chr2	44945345
chr2:44945345	G G	GA GA	8	a0001c0001t0003 a0001c0001t0010 a0001c0001t0012 others(5): Show a0001c0001t0003 a0001c0001t0010 a0001c0001t0012 a0001c0001t0025 a0001c0001t0028 a0001c0001t0031 a0001c0001t0042 a0001c0001t0056	64	HG00558.hp2 HG00642.hp1 HG00673.hp2 others(61): Show HG00558.hp2 HG00642.hp1 HG00673.hp2 HG01099.hp2 HG01106.hp1 HG01123.hp1 HG01243.hp2 HG01884.hp1 HG02080.hp2 HG02109.hp1 HG02165.hp1 HG02257.hp1 HG02280.hp1 HG02572.hp2 HG02602.hp2 HG02622.hp1 HG02622.hp2 HG02717.hp1 HG02735.hp2 HG02818.hp2 HG02886.hp1 HG02896.hp2 HG02897.hp1 HG02922.hp1 HG03209.hp1 HG03516.hp2 HG03540.hp2 HG03579.hp2 HG03654.hp2 HG04184.hp2 NA18522.hp1 NA18747.hp2 NA18939.hp1 NA18939.hp2 NA18944.hp1 NA18947.hp1 NA18951.hp2 NA18952.hp1 NA18953.hp2 NA18955.hp1 NA18957.hp2 NA18959.hp1 NA18964.hp2 NA18973.hp2 NA18982.hp1 NA18984.hp2 NA18986.hp2 NA18989.hp2 NA18994.hp1 NA18997.hp1 NA18999.hp2 NA19000.hp2 NA19002.hp1 NA19010.hp2 NA19043.hp1 NA19068.hp1 NA19074.hp2 NA19078.hp2 NA19079.hp2 NA19080.hp2 NA19087.hp1 NA19091.hp1 NA19240.hp2 NA20300.hp2	3_prime_UTR_variant	MODIFIER	c.585_586insA c.585_586insA	SIX3	ENSG00000138083.5	transcript	ENST00000260653.5	protein_coding	2/2	586		chr2	44945345
chr2:44945345	G G	GAA GAA	4	a0001c0001t0022 a0001c0001t0023 a0001c0001t0024 others(1): Show a0001c0001t0022 a0001c0001t0023 a0001c0001t0024 a0001c0001t0058	13	HG02135.hp1 HG02155.hp1 NA18940.hp1 others(10): Show HG02135.hp1 HG02155.hp1 NA18940.hp1 NA18956.hp1 NA18957.hp1 NA18972.hp2 NA18979.hp1 NA18997.hp2 NA19055.hp1 NA19081.hp1 NA19088.hp2 NA19091.hp2 homoSapiens_chm13v2.hp1	3_prime_UTR_variant	MODIFIER	c.585_586insAA c.585_586insAA	SIX3	ENSG00000138083.5	transcript	ENST00000260653.5	protein_coding	2/2	586		chr2	44945345
chr2:44945346	G G	A A	36	a0001c0001t0001 a0001c0001t0003 a0001c0001t0004 others(33): Show a0001c0001t0001 a0001c0001t0003 a0001c0001t0004 a0001c0001t0007 a0001c0001t0009 a0001c0001t0010 a0001c0001t0012 a0001c0001t0013 a0001c0001t0019 a0001c0001t0020 a0001c0001t0022 a0001c0001t0023 a0001c0001t0024 a0001c0001t0025 a0001c0001t0027 a0001c0001t0028 a0001c0001t0030 a0001c0001t0031 a0001c0001t0037 a0001c0001t0040 a0001c0001t0041 a0001c0001t0042 a0001c0001t0045 a0001c0001t0046 a0001c0001t0051 a0001c0001t0053 a0001c0001t0054 a0001c0001t0056 a0001c0001t0057 a0001c0001t0058 a0001c0001t0065 a0001c0003t0011 a0001c0003t0032 a0001c0003t0059 a0001c0003t0060 a0005c0007t0036	261	HG00140.hp1 HG00280.hp2 HG00323.hp2 others(258): Show HG00140.hp1 HG00280.hp2 HG00323.hp2 HG00438.hp1 HG00558.hp2 HG00639.hp1 HG00639.hp2 HG00642.hp1 HG00673.hp2 HG00741.hp2 HG01069.hp1 HG01070.hp1 HG01070.hp2 HG01071.hp1 HG01071.hp2 HG01081.hp2 HG01099.hp2 HG01106.hp1 HG01106.hp2 HG01109.hp2 HG01123.hp1 HG01167.hp1 HG01168.hp2 HG01169.hp1 HG01169.hp2 HG01243.hp1 HG01243.hp2 HG01256.hp1 HG01258.hp1 HG01261.hp1 HG01358.hp2 HG01433.hp1 HG01515.hp2 HG01516.hp1 HG01517.hp1 HG01884.hp1 HG01884.hp2 HG01891.hp1 HG01934.hp1 HG01943.hp1 HG01952.hp1 HG01978.hp1 HG01978.hp2 HG01981.hp1 HG01993.hp2 HG02004.hp1 HG02015.hp2 HG02027.hp1 HG02027.hp2 HG02040.hp1 HG02040.hp2 HG02055.hp1 HG02056.hp2 HG02071.hp1 HG02071.hp2 HG02074.hp2 HG02080.hp1 HG02080.hp2 HG02083.hp1 HG02109.hp1 HG02132.hp1 HG02132.hp2 HG02135.hp1 HG02135.hp2 HG02145.hp1 HG02145.hp2 HG02148.hp1 HG02148.hp2 HG02155.hp1 HG02165.hp1 HG02257.hp1 HG02257.hp2 HG02258.hp1 HG02273.hp2 HG02280.hp1 HG02280.hp2 HG02300.hp1 HG02451.hp2 HG02486.hp1 HG02486.hp2 HG02559.hp2 HG02572.hp2 HG02602.hp1 HG02602.hp2 HG02615.hp2 HG02622.hp1 HG02622.hp2 HG02630.hp1 HG02647.hp1 HG02683.hp1 HG02698.hp1 HG02717.hp1 HG02723.hp1 HG02723.hp2 HG02735.hp1 HG02735.hp2 HG02738.hp2 HG02809.hp2 HG02818.hp2 HG02886.hp1 HG02896.hp1 HG02896.hp2 HG02897.hp1 HG02922.hp1 HG02965.hp1 HG02965.hp2 HG02970.hp1 HG03017.hp2 HG03041.hp1 HG03130.hp1 HG03130.hp2 HG03209.hp1 HG03225.hp1 HG03453.hp1 HG03471.hp1 HG03486.hp1 HG03491.hp1 HG03492.hp1 HG03492.hp2 HG03516.hp2 HG03540.hp1 HG03540.hp2 HG03579.hp1 HG03579.hp2 HG03654.hp2 HG03669.hp2 HG03704.hp1 HG03704.hp2 HG03710.hp1 HG03710.hp2 HG03831.hp1 HG03831.hp2 HG03834.hp1 HG03834.hp2 HG04115.hp1 HG04115.hp2 HG04184.hp2 HG04204.hp1 HG04228.hp1 HG06807.hp2 NA18522.hp1 NA18522.hp2 NA18612.hp1 NA18612.hp2 NA18747.hp2 NA18939.hp1 NA18939.hp2 NA18940.hp1 NA18942.hp1 NA18944.hp1 NA18945.hp1 NA18945.hp2 NA18946.hp2 NA18947.hp1 NA18948.hp1 NA18948.hp2 NA18949.hp1 NA18950.hp1 NA18950.hp2 NA18951.hp1 NA18951.hp2 NA18952.hp1 NA18952.hp2 NA18953.hp1 NA18953.hp2 NA18955.hp1 NA18955.hp2 NA18956.hp1 NA18956.hp2 NA18957.hp1 NA18957.hp2 NA18959.hp1 NA18960.hp1 NA18960.hp2 NA18961.hp1 NA18963.hp1 NA18963.hp2 NA18964.hp2 NA18966.hp2 NA18967.hp1 NA18967.hp2 NA18968.hp1 NA18971.hp1 NA18972.hp1 NA18972.hp2 NA18973.hp1 NA18973.hp2 NA18974.hp2 NA18975.hp1 NA18975.hp2 NA18977.hp2 NA18979.hp1 NA18979.hp2 NA18980.hp2 NA18982.hp1 NA18982.hp2 NA18984.hp1 NA18984.hp2 NA18985.hp2 NA18986.hp2 NA18989.hp2 NA18990.hp2 NA18993.hp2 NA18994.hp1 NA18997.hp1 NA18997.hp2 NA18998.hp1 NA18999.hp1 NA18999.hp2 NA19000.hp1 NA19000.hp2 NA19002.hp1 NA19002.hp2 NA19003.hp2 NA19004.hp2 NA19005.hp1 NA19007.hp1 NA19009.hp2 NA19010.hp2 NA19012.hp1 NA19012.hp2 NA19043.hp1 NA19055.hp1 NA19055.hp2 NA19057.hp2 NA19058.hp1 NA19059.hp2 NA19064.hp1 NA19064.hp2 NA19067.hp2 NA19068.hp1 NA19068.hp2 NA19070.hp1 NA19070.hp2 NA19072.hp1 NA19072.hp2 NA19074.hp2 NA19076.hp1 NA19076.hp2 NA19078.hp1 NA19078.hp2 NA19079.hp2 NA19080.hp1 NA19080.hp2 NA19081.hp1 NA19081.hp2 NA19083.hp1 NA19083.hp2 NA19085.hp2 NA19087.hp1 NA19088.hp1 NA19088.hp2 NA19091.hp1 NA19091.hp2 NA19240.hp1 NA19240.hp2 NA20129.hp1 NA20300.hp2 NA20752.hp1 NA20905.hp2 homoSapiens_chm13v2.hp1	3_prime_UTR_variant	MODIFIER	c.586G>A c.586G>A	SIX3	ENSG00000138083.5	transcript	ENST00000260653.5	protein_coding	2/2	586		chr2	44945346
chr2:44945346	G G	GA GA	13	a0001c0001t0006 a0001c0001t0026 a0001c0001t0034 others(10): Show a0001c0001t0006 a0001c0001t0026 a0001c0001t0034 a0001c0001t0035 a0001c0001t0038 a0001c0001t0055 a0001c0001t0062 a0001c0001t0067 a0001c0002t0006 a0001c0002t0034 a0001c0004t0026 a0001c0005t0069 a0001c0011t0006	32	HG00597.hp2 HG00609.hp2 HG00733.hp1 others(29): Show HG00597.hp2 HG00609.hp2 HG00733.hp1 HG01168.hp1 HG01257.hp2 HG01516.hp2 HG01975.hp1 HG02056.hp1 HG02300.hp2 HG02451.hp1 HG02559.hp1 HG02698.hp2 HG02717.hp2 HG02818.hp1 HG02970.hp2 HG03098.hp2 HG03139.hp2 HG03209.hp2 HG03453.hp2 HG03486.hp2 HG03516.hp1 HG04199.hp2 NA18944.hp2 NA18954.hp2 NA18998.hp2 NA19011.hp2 NA19030.hp1 NA19043.hp2 NA19054.hp1 NA19090.hp1 NA21309.hp1 NA21309.hp2	3_prime_UTR_variant	MODIFIER	c.601dupA c.601dupA	SIX3	ENSG00000138083.5	transcript	ENST00000260653.5	protein_coding	2/2	602	INFO_REALIGN_3_PRIME	chr2	44945346
chr2:44945362	G G	A A	10	a0001c0001t0029 a0001c0001t0062 a0001c0001t0063 others(7): Show a0001c0001t0029 a0001c0001t0062 a0001c0001t0063 a0001c0001t0064 a0001c0001t0065 a0001c0003t0011 a0001c0003t0032 a0001c0003t0059 a0001c0003t0060 a0004c0010t0029	20	HG00741.hp2 HG01070.hp2 HG01167.hp1 others(17): Show HG00741.hp2 HG01070.hp2 HG01167.hp1 HG01169.hp1 HG01261.hp1 HG01952.hp1 HG02615.hp1 HG02735.hp1 HG02886.hp2 HG02895.hp1 HG03098.hp1 HG03098.hp2 HG03471.hp1 HG03471.hp2 HG03710.hp2 HG03831.hp1 HG04204.hp1 NA18968.hp1 NA19064.hp2 NA19072.hp2	3_prime_UTR_variant	MODIFIER	c.602G>A c.602G>A	SIX3	ENSG00000138083.5	transcript	ENST00000260653.5	protein_coding	2/2	602		chr2	44945362
chr2:44945417	CT CT	C C	32	a0001c0001t0001 a0001c0001t0003 a0001c0001t0004 others(29): Show a0001c0001t0001 a0001c0001t0003 a0001c0001t0004 a0001c0001t0007 a0001c0001t0009 a0001c0001t0010 a0001c0001t0012 a0001c0001t0013 a0001c0001t0019 a0001c0001t0020 a0001c0001t0022 a0001c0001t0023 a0001c0001t0024 a0001c0001t0025 a0001c0001t0027 a0001c0001t0028 a0001c0001t0031 a0001c0001t0037 a0001c0001t0041 a0001c0001t0042 a0001c0001t0043 a0001c0001t0045 a0001c0001t0047 a0001c0001t0050 a0001c0001t0051 a0001c0001t0053 a0001c0001t0054 a0001c0001t0055 a0001c0001t0056 a0001c0001t0057 a0001c0001t0058 a0005c0007t0036	247	HG00140.hp1 HG00280.hp2 HG00323.hp2 others(244): Show HG00140.hp1 HG00280.hp2 HG00323.hp2 HG00438.hp1 HG00558.hp2 HG00609.hp2 HG00639.hp1 HG00639.hp2 HG00642.hp1 HG00673.hp2 HG01069.hp1 HG01070.hp1 HG01071.hp1 HG01071.hp2 HG01081.hp1 HG01081.hp2 HG01099.hp2 HG01106.hp1 HG01106.hp2 HG01109.hp2 HG01123.hp1 HG01168.hp2 HG01169.hp2 HG01243.hp1 HG01243.hp2 HG01256.hp1 HG01258.hp1 HG01358.hp2 HG01433.hp1 HG01515.hp2 HG01516.hp1 HG01517.hp1 HG01884.hp1 HG01884.hp2 HG01891.hp1 HG01934.hp1 HG01943.hp1 HG01978.hp1 HG01978.hp2 HG01981.hp1 HG01993.hp2 HG02015.hp2 HG02027.hp1 HG02027.hp2 HG02040.hp1 HG02040.hp2 HG02055.hp1 HG02056.hp2 HG02071.hp1 HG02071.hp2 HG02074.hp2 HG02080.hp1 HG02080.hp2 HG02083.hp1 HG02109.hp1 HG02132.hp1 HG02132.hp2 HG02135.hp1 HG02135.hp2 HG02145.hp1 HG02145.hp2 HG02148.hp1 HG02148.hp2 HG02155.hp1 HG02165.hp1 HG02257.hp1 HG02257.hp2 HG02258.hp1 HG02273.hp2 HG02280.hp1 HG02280.hp2 HG02300.hp1 HG02451.hp2 HG02486.hp1 HG02486.hp2 HG02559.hp2 HG02572.hp2 HG02602.hp1 HG02602.hp2 HG02615.hp2 HG02622.hp1 HG02622.hp2 HG02630.hp1 HG02647.hp1 HG02683.hp1 HG02698.hp1 HG02717.hp1 HG02723.hp1 HG02723.hp2 HG02735.hp2 HG02738.hp2 HG02809.hp2 HG02818.hp2 HG02886.hp1 HG02896.hp1 HG02896.hp2 HG02897.hp1 HG02922.hp1 HG02965.hp1 HG02965.hp2 HG02970.hp1 HG03017.hp2 HG03041.hp1 HG03130.hp1 HG03130.hp2 HG03209.hp1 HG03225.hp1 HG03453.hp1 HG03486.hp1 HG03491.hp1 HG03492.hp1 HG03492.hp2 HG03516.hp2 HG03540.hp1 HG03540.hp2 HG03579.hp1 HG03579.hp2 HG03654.hp2 HG03669.hp2 HG03688.hp2 HG03704.hp1 HG03704.hp2 HG03710.hp1 HG03831.hp2 HG03834.hp1 HG03834.hp2 HG04115.hp1 HG04115.hp2 HG04184.hp2 HG04228.hp1 HG06807.hp2 NA18522.hp1 NA18522.hp2 NA18612.hp1 NA18612.hp2 NA18747.hp2 NA18939.hp1 NA18939.hp2 NA18940.hp1 NA18942.hp1 NA18944.hp1 NA18945.hp1 NA18945.hp2 NA18946.hp2 NA18947.hp1 NA18948.hp1 NA18948.hp2 NA18949.hp1 NA18950.hp2 NA18951.hp1 NA18951.hp2 NA18952.hp1 NA18952.hp2 NA18953.hp1 NA18953.hp2 NA18954.hp1 NA18955.hp1 NA18955.hp2 NA18956.hp1 NA18956.hp2 NA18957.hp1 NA18957.hp2 NA18959.hp1 NA18960.hp1 NA18960.hp2 NA18961.hp1 NA18963.hp1 NA18963.hp2 NA18964.hp2 NA18966.hp2 NA18967.hp2 NA18971.hp1 NA18972.hp1 NA18972.hp2 NA18973.hp1 NA18973.hp2 NA18974.hp2 NA18975.hp1 NA18975.hp2 NA18977.hp2 NA18979.hp1 NA18979.hp2 NA18980.hp2 NA18982.hp1 NA18982.hp2 NA18984.hp1 NA18984.hp2 NA18985.hp2 NA18986.hp2 NA18989.hp2 NA18990.hp2 NA18993.hp2 NA18994.hp1 NA18997.hp1 NA18997.hp2 NA18998.hp1 NA18999.hp1 NA18999.hp2 NA19000.hp1 NA19000.hp2 NA19002.hp1 NA19002.hp2 NA19003.hp2 NA19004.hp2 NA19005.hp1 NA19007.hp1 NA19009.hp2 NA19010.hp2 NA19012.hp1 NA19012.hp2 NA19043.hp1 NA19055.hp1 NA19055.hp2 NA19057.hp2 NA19058.hp1 NA19059.hp2 NA19064.hp1 NA19067.hp2 NA19068.hp1 NA19068.hp2 NA19070.hp1 NA19070.hp2 NA19072.hp1 NA19074.hp2 NA19076.hp1 NA19078.hp1 NA19078.hp2 NA19079.hp2 NA19080.hp1 NA19080.hp2 NA19081.hp1 NA19081.hp2 NA19083.hp1 NA19083.hp2 NA19085.hp2 NA19087.hp1 NA19088.hp1 NA19088.hp2 NA19091.hp1 NA19091.hp2 NA19240.hp1 NA19240.hp2 NA20129.hp1 NA20300.hp2 NA20752.hp1 NA20905.hp2 homoSapiens_chm13v2.hp1	3_prime_UTR_variant	MODIFIER	c.666delT c.666delT	SIX3	ENSG00000138083.5	transcript	ENST00000260653.5	protein_coding	2/2	666	INFO_REALIGN_3_PRIME	chr2	44945417
chr2:44945431	C C	T T	2	a0001c0001t0018 a0001c0001t0044 a0001c0001t0018 a0001c0001t0044	6	HG00741.hp1 HG02647.hp2 HG03041.hp2 others(3): Show HG00741.hp1 HG02647.hp2 HG03041.hp2 HG03139.hp1 HG03195.hp2 HG03225.hp2	3_prime_UTR_variant	MODIFIER	c.671C>T c.671C>T	SIX3	ENSG00000138083.5	transcript	ENST00000260653.5	protein_coding	2/2	671		chr2	44945431
chr2:44945669	G G	A A	1	a0001c0001t0039 a0001c0001t0039	1	HG03942.hp1 HG03942.hp1	3_prime_UTR_variant	MODIFIER	c.909G>A c.909G>A	SIX3	ENSG00000138083.5	transcript	ENST00000260653.5	protein_coding	2/2	909		chr2	44945669
chr2:44945688	A A	G G	1	a0001c0001t0064 a0001c0001t0064	1	HG03098.hp1 HG03098.hp1	3_prime_UTR_variant	MODIFIER	c.928A>G c.928A>G	SIX3	ENSG00000138083.5	transcript	ENST00000260653.5	protein_coding	2/2	928		chr2	44945688
chr2:44945731	C C	T T	1	a0001c0001t0049 a0001c0001t0049	1	HG03669.hp1 HG03669.hp1	3_prime_UTR_variant	MODIFIER	c.971C>T c.971C>T	SIX3	ENSG00000138083.5	transcript	ENST00000260653.5	protein_coding	2/2	971		chr2	44945731
chr2:44945786	G G	A A	16	a0001c0001t0002 a0001c0001t0014 a0001c0001t0015 others(13): Show a0001c0001t0002 a0001c0001t0014 a0001c0001t0015 a0001c0001t0017 a0001c0001t0018 a0001c0001t0026 a0001c0001t0030 a0001c0001t0040 a0001c0001t0044 a0001c0001t0048 a0001c0001t0049 a0001c0004t0002 a0001c0004t0014 a0001c0004t0026 a0001c0006t0002 a0003c0008t0002	104	HG00280.hp1 HG00423.hp1 HG00438.hp2 others(101): Show HG00280.hp1 HG00423.hp1 HG00438.hp2 HG00544.hp1 HG00544.hp2 HG00558.hp1 HG00597.hp1 HG00609.hp1 HG00642.hp2 HG00673.hp1 HG00735.hp2 HG00738.hp1 HG00738.hp2 HG00741.hp1 HG01109.hp1 HG01123.hp2 HG01255.hp2 HG01257.hp1 HG01258.hp2 HG01346.hp2 HG01934.hp2 HG01943.hp2 HG01952.hp2 HG01975.hp2 HG01981.hp2 HG01993.hp1 HG02004.hp2 HG02015.hp1 HG02055.hp2 HG02056.hp1 HG02074.hp1 HG02083.hp2 HG02109.hp2 HG02129.hp1 HG02129.hp2 HG02155.hp2 HG02165.hp2 HG02273.hp1 HG02572.hp1 HG02630.hp2 HG02647.hp2 HG02683.hp2 HG02738.hp1 HG02922.hp2 HG02976.hp1 HG03017.hp1 HG03041.hp2 HG03139.hp1 HG03139.hp2 HG03195.hp1 HG03195.hp2 HG03225.hp2 HG03239.hp1 HG03239.hp2 HG03516.hp1 HG03669.hp1 HG03942.hp2 HG04184.hp1 HG04199.hp1 HG04204.hp2 NA18747.hp1 NA18906.hp1 NA18940.hp2 NA18941.hp1 NA18941.hp2 NA18942.hp2 NA18946.hp1 NA18947.hp2 NA18950.hp1 NA18959.hp2 NA18961.hp2 NA18964.hp1 NA18966.hp1 NA18967.hp1 NA18968.hp2 NA18971.hp2 NA18980.hp1 NA18985.hp1 NA18989.hp1 NA18990.hp1 NA18994.hp2 NA18995.hp2 NA19007.hp2 NA19009.hp1 NA19010.hp1 NA19011.hp1 NA19030.hp2 NA19054.hp2 NA19057.hp1 NA19058.hp2 NA19060.hp1 NA19060.hp2 NA19063.hp1 NA19063.hp2 NA19067.hp1 NA19074.hp1 NA19076.hp2 NA19079.hp1 NA19085.hp1 NA19087.hp2 NA19090.hp2 NA20129.hp2 NA20752.hp2 NA20905.hp1	3_prime_UTR_variant	MODIFIER	c.1026G>A c.1026G>A	SIX3	ENSG00000138083.5	transcript	ENST00000260653.5	protein_coding	2/2	1026		chr2	44945786
chr2:44945833	C C	T T	7	a0001c0001t0012 a0001c0001t0023 a0001c0001t0024 others(4): Show a0001c0001t0012 a0001c0001t0023 a0001c0001t0024 a0001c0001t0028 a0001c0001t0051 a0001c0001t0056 a0001c0001t0058	22	HG01106.hp1 HG01884.hp1 HG02135.hp1 others(19): Show HG01106.hp1 HG01884.hp1 HG02135.hp1 HG02155.hp1 HG02257.hp1 HG02280.hp1 HG02572.hp2 HG02622.hp1 HG02622.hp2 HG02922.hp1 HG03041.hp1 HG03209.hp1 HG03540.hp2 NA18522.hp1 NA18940.hp1 NA18957.hp1 NA18972.hp2 NA18997.hp2 NA19055.hp1 NA19081.hp1 NA19091.hp2 NA20300.hp2	3_prime_UTR_variant	MODIFIER	c.1073C>T c.1073C>T	SIX3	ENSG00000138083.5	transcript	ENST00000260653.5	protein_coding	2/2	1073		chr2	44945833
chr2:44945834	G G	A A	1	a0001c0001t0045 a0001c0001t0045	1	HG02027.hp1 HG02027.hp1	3_prime_UTR_variant	MODIFIER	c.1074G>A c.1074G>A	SIX3	ENSG00000138083.5	transcript	ENST00000260653.5	protein_coding	2/2	1074		chr2	44945834
chr2:44945943	G G	C C	7	a0001c0003t0011 a0001c0003t0032 a0001c0003t0059 others(4): Show a0001c0003t0011 a0001c0003t0032 a0001c0003t0059 a0001c0003t0060 a0001c0005t0033 a0001c0005t0068 a0001c0005t0069	17	HG00741.hp2 HG01070.hp2 HG01167.hp1 others(14): Show HG00741.hp2 HG01070.hp2 HG01167.hp1 HG01169.hp1 HG01261.hp1 HG01952.hp1 HG02735.hp1 HG02809.hp1 HG02976.hp2 HG03654.hp1 HG03710.hp2 HG03831.hp1 HG04204.hp1 NA18968.hp1 NA19030.hp1 NA19064.hp2 NA19072.hp2	3_prime_UTR_variant	MODIFIER	c.1183G>C c.1183G>C	SIX3	ENSG00000138083.5	transcript	ENST00000260653.5	protein_coding	2/2	1183		chr2	44945943

chr:pos	ref	alt	# # of ghapid:genebody level	ghapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	genename	geneid	featuretype	featureid	genebody_biotype	rank	chr	pos
chr2:44943014	G G	A A	31	a0001c0001t0001g0001 a0001c0001t0001g0009 a0001c0001t0001g0013 others(28): Show a0001c0001t0001g0001 a0001c0001t0001g0009 a0001c0001t0001g0013 a0001c0001t0003g0001 a0001c0001t0004g0001 a0001c0001t0004g0010 a0001c0001t0007g0001 a0001c0001t0009g0001 a0001c0001t0009g0011 a0001c0001t0010g0001 a0001c0001t0013g0001 a0001c0001t0018g0012 a0001c0001t0019g0001 a0001c0001t0020g0007 a0001c0001t0027g0001 a0001c0001t0031g0001 a0001c0001t0037g0001 a0001c0001t0041g0001 a0001c0001t0042g0001 a0001c0001t0043g0001 a0001c0001t0046g0001 a0001c0001t0047g0001 a0001c0001t0050g0001 a0001c0001t0053g0001 a0001c0001t0054g0001 a0001c0001t0057g0001 a0001c0003t0011g0005 a0001c0003t0032g0005 a0001c0003t0059g0005 a0001c0003t0060g0005 a0005c0007t0036g0001	192	HG00140.hp1 HG00280.hp2 HG00323.hp2 others(189): Show HG00140.hp1 HG00280.hp2 HG00323.hp2 HG00438.hp1 HG00639.hp1 HG00639.hp2 HG00642.hp1 HG00741.hp2 HG01069.hp1 HG01070.hp1 HG01070.hp2 HG01071.hp1 HG01071.hp2 HG01081.hp1 HG01081.hp2 HG01099.hp2 HG01106.hp2 HG01109.hp2 HG01123.hp1 HG01167.hp1 HG01168.hp2 HG01169.hp1 HG01169.hp2 HG01243.hp1 HG01256.hp1 HG01258.hp1 HG01261.hp1 HG01358.hp2 HG01433.hp1 HG01515.hp2 HG01516.hp1 HG01517.hp1 HG01884.hp2 HG01891.hp1 HG01934.hp1 HG01943.hp1 HG01952.hp1 HG01978.hp1 HG01978.hp2 HG01981.hp1 HG01993.hp2 HG02004.hp1 HG02015.hp2 HG02027.hp2 HG02040.hp1 HG02040.hp2 HG02055.hp1 HG02056.hp2 HG02071.hp1 HG02071.hp2 HG02074.hp2 HG02080.hp1 HG02083.hp1 HG02109.hp1 HG02132.hp1 HG02132.hp2 HG02135.hp2 HG02145.hp1 HG02145.hp2 HG02148.hp1 HG02148.hp2 HG02258.hp1 HG02273.hp2 HG02280.hp2 HG02300.hp1 HG02451.hp2 HG02486.hp1 HG02486.hp2 HG02559.hp2 HG02602.hp1 HG02615.hp2 HG02630.hp1 HG02683.hp1 HG02698.hp1 HG02717.hp1 HG02723.hp1 HG02723.hp2 HG02735.hp1 HG02738.hp2 HG02818.hp2 HG02886.hp1 HG02896.hp1 HG02896.hp2 HG02897.hp1 HG02965.hp1 HG03017.hp2 HG03130.hp1 HG03130.hp2 HG03225.hp1 HG03225.hp2 HG03453.hp1 HG03486.hp1 HG03491.hp1 HG03492.hp1 HG03492.hp2 HG03516.hp2 HG03540.hp1 HG03579.hp1 HG03579.hp2 HG03669.hp2 HG03688.hp2 HG03704.hp1 HG03704.hp2 HG03710.hp1 HG03710.hp2 HG03831.hp1 HG03831.hp2 HG03834.hp1 HG03834.hp2 HG04115.hp1 HG04115.hp2 HG04204.hp1 HG04228.hp1 HG06807.hp2 NA18522.hp2 NA18612.hp1 NA18612.hp2 NA18939.hp2 NA18942.hp1 NA18945.hp1 NA18945.hp2 NA18946.hp2 NA18948.hp1 NA18948.hp2 NA18949.hp1 NA18950.hp2 NA18951.hp1 NA18952.hp2 NA18953.hp1 NA18954.hp1 NA18955.hp2 NA18956.hp2 NA18960.hp1 NA18960.hp2 NA18961.hp1 NA18963.hp1 NA18963.hp2 NA18966.hp2 NA18967.hp2 NA18968.hp1 NA18971.hp1 NA18972.hp1 NA18973.hp1 NA18974.hp2 NA18975.hp1 NA18975.hp2 NA18977.hp2 NA18979.hp2 NA18980.hp2 NA18982.hp2 NA18984.hp1 NA18985.hp2 NA18990.hp2 NA18993.hp2 NA18998.hp1 NA18999.hp1 NA19000.hp1 NA19002.hp2 NA19003.hp2 NA19004.hp2 NA19005.hp1 NA19007.hp1 NA19009.hp2 NA19012.hp1 NA19012.hp2 NA19055.hp2 NA19057.hp2 NA19058.hp1 NA19059.hp2 NA19064.hp1 NA19064.hp2 NA19067.hp2 NA19068.hp2 NA19070.hp1 NA19070.hp2 NA19072.hp1 NA19072.hp2 NA19076.hp1 NA19078.hp1 NA19079.hp2 NA19080.hp1 NA19081.hp2 NA19083.hp1 NA19083.hp2 NA19085.hp2 NA19087.hp1 NA19088.hp1 NA19240.hp1 NA19240.hp2 NA20129.hp1 NA20752.hp1 NA20905.hp2	intron_variant	MODIFIER	c.806+104G>A c.806+104G>A	SIX3	ENSG00000138083.5	transcript	ENST00000260653.5	protein_coding	1/1	chr2	44943014
chr2:44943032	G G	C C	1	a0001c0001t0004g0010 a0001c0001t0004g0010	1	HG03017.hp2 HG03017.hp2	intron_variant	MODIFIER	c.806+122G>C c.806+122G>C	SIX3	ENSG00000138083.5	transcript	ENST00000260653.5	protein_coding	1/1	chr2	44943032
chr2:44943053	G G	C C	15	a0001c0001t0006g0004 a0001c0001t0012g0004 a0001c0001t0029g0004 others(12): Show a0001c0001t0006g0004 a0001c0001t0012g0004 a0001c0001t0029g0004 a0001c0001t0034g0004 a0001c0001t0035g0004 a0001c0001t0062g0004 a0001c0001t0063g0004 a0001c0001t0064g0004 a0001c0001t0065g0004 a0001c0001t0067g0004 a0001c0002t0006g0004 a0001c0002t0034g0004 a0001c0002t0066g0004 a0001c0011t0006g0004 a0004c0010t0029g0004	34	HG00423.hp2 HG00597.hp2 HG00733.hp1 others(31): Show HG00423.hp2 HG00597.hp2 HG00733.hp1 HG01168.hp1 HG01257.hp2 HG01516.hp2 HG01975.hp1 HG02300.hp2 HG02451.hp1 HG02559.hp1 HG02615.hp1 HG02698.hp2 HG02717.hp2 HG02818.hp1 HG02886.hp2 HG02895.hp1 HG02970.hp2 HG03098.hp1 HG03098.hp2 HG03209.hp1 HG03209.hp2 HG03453.hp2 HG03471.hp1 HG03471.hp2 HG03486.hp2 HG04199.hp2 NA18944.hp2 NA18954.hp2 NA18998.hp2 NA19011.hp2 NA19043.hp2 NA19054.hp1 NA21309.hp1 NA21309.hp2	intron_variant	MODIFIER	c.806+143G>C c.806+143G>C	SIX3	ENSG00000138083.5	transcript	ENST00000260653.5	protein_coding	1/1	chr2	44943053
chr2:44943055	A A	G G	22	a0001c0001t0006g0004 a0001c0001t0012g0004 a0001c0001t0029g0004 others(19): Show a0001c0001t0006g0004 a0001c0001t0012g0004 a0001c0001t0029g0004 a0001c0001t0034g0004 a0001c0001t0035g0004 a0001c0001t0062g0004 a0001c0001t0063g0004 a0001c0001t0064g0004 a0001c0001t0065g0004 a0001c0001t0067g0004 a0001c0002t0006g0004 a0001c0002t0034g0004 a0001c0002t0066g0004 a0001c0003t0011g0005 a0001c0003t0032g0005 a0001c0003t0059g0005 a0001c0003t0060g0005 a0001c0005t0033g0008 a0001c0005t0068g0008 a0001c0005t0069g0008 a0001c0011t0006g0004 a0004c0010t0029g0004	51	HG00423.hp2 HG00597.hp2 HG00733.hp1 others(48): Show HG00423.hp2 HG00597.hp2 HG00733.hp1 HG00741.hp2 HG01070.hp2 HG01167.hp1 HG01168.hp1 HG01169.hp1 HG01257.hp2 HG01261.hp1 HG01516.hp2 HG01952.hp1 HG01975.hp1 HG02300.hp2 HG02451.hp1 HG02559.hp1 HG02615.hp1 HG02698.hp2 HG02717.hp2 HG02735.hp1 HG02809.hp1 HG02818.hp1 HG02886.hp2 HG02895.hp1 HG02970.hp2 HG02976.hp2 HG03098.hp1 HG03098.hp2 HG03209.hp1 HG03209.hp2 HG03453.hp2 HG03471.hp1 HG03471.hp2 HG03486.hp2 HG03654.hp1 HG03710.hp2 HG03831.hp1 HG04199.hp2 HG04204.hp1 NA18944.hp2 NA18954.hp2 NA18968.hp1 NA18998.hp2 NA19011.hp2 NA19030.hp1 NA19043.hp2 NA19054.hp1 NA19064.hp2 NA19072.hp2 NA21309.hp1 NA21309.hp2	intron_variant	MODIFIER	c.806+145A>G c.806+145A>G	SIX3	ENSG00000138083.5	transcript	ENST00000260653.5	protein_coding	1/1	chr2	44943055
chr2:44943296	G G	A A	18	a0001c0001t0006g0004 a0001c0001t0012g0004 a0001c0001t0029g0004 others(15): Show a0001c0001t0006g0004 a0001c0001t0012g0004 a0001c0001t0029g0004 a0001c0001t0034g0004 a0001c0001t0035g0004 a0001c0001t0062g0004 a0001c0001t0063g0004 a0001c0001t0064g0004 a0001c0001t0065g0004 a0001c0001t0067g0004 a0001c0002t0006g0004 a0001c0002t0034g0004 a0001c0002t0066g0004 a0001c0005t0033g0008 a0001c0005t0068g0008 a0001c0005t0069g0008 a0001c0011t0006g0004 a0004c0010t0029g0004	38	HG00423.hp2 HG00597.hp2 HG00733.hp1 others(35): Show HG00423.hp2 HG00597.hp2 HG00733.hp1 HG01168.hp1 HG01257.hp2 HG01516.hp2 HG01975.hp1 HG02300.hp2 HG02451.hp1 HG02559.hp1 HG02615.hp1 HG02698.hp2 HG02717.hp2 HG02809.hp1 HG02818.hp1 HG02886.hp2 HG02895.hp1 HG02970.hp2 HG02976.hp2 HG03098.hp1 HG03098.hp2 HG03209.hp1 HG03209.hp2 HG03453.hp2 HG03471.hp1 HG03471.hp2 HG03486.hp2 HG03654.hp1 HG04199.hp2 NA18944.hp2 NA18954.hp2 NA18998.hp2 NA19011.hp2 NA19030.hp1 NA19043.hp2 NA19054.hp1 NA21309.hp1 NA21309.hp2	intron_variant	MODIFIER	c.806+386G>A c.806+386G>A	SIX3	ENSG00000138083.5	transcript	ENST00000260653.5	protein_coding	1/1	chr2	44943296
chr2:44943307	C C	T T	3	a0001c0005t0033g0008 a0001c0005t0068g0008 a0001c0005t0069g0008 a0001c0005t0033g0008 a0001c0005t0068g0008 a0001c0005t0069g0008	4	HG02809.hp1 HG02976.hp2 HG03654.hp1 others(1): Show HG02809.hp1 HG02976.hp2 HG03654.hp1 NA19030.hp1	intron_variant	MODIFIER	c.806+397C>T c.806+397C>T	SIX3	ENSG00000138083.5	transcript	ENST00000260653.5	protein_coding	1/1	chr2	44943307
chr2:44943376	A A	G G	41	a0001c0001t0002g0002 a0001c0001t0002g0016 a0001c0001t0002g0018 others(38): Show a0001c0001t0002g0002 a0001c0001t0002g0016 a0001c0001t0002g0018 a0001c0001t0006g0004 a0001c0001t0012g0004 a0001c0001t0013g0002 a0001c0001t0014g0002 a0001c0001t0015g0002 a0001c0001t0017g0002 a0001c0001t0018g0002 a0001c0001t0021g0002 a0001c0001t0021g0017 a0001c0001t0026g0002 a0001c0001t0029g0004 a0001c0001t0030g0002 a0001c0001t0034g0004 a0001c0001t0035g0004 a0001c0001t0040g0002 a0001c0001t0044g0002 a0001c0001t0045g0002 a0001c0001t0048g0002 a0001c0001t0049g0002 a0001c0001t0052g0002 a0001c0001t0062g0004 a0001c0001t0063g0004 a0001c0001t0064g0004 a0001c0001t0065g0004 a0001c0001t0067g0004 a0001c0002t0006g0004 a0001c0002t0034g0004 a0001c0002t0066g0004 a0001c0004t0002g0002 a0001c0004t0014g0002 a0001c0004t0026g0002 a0001c0005t0033g0008 a0001c0005t0068g0008 a0001c0005t0069g0008 a0001c0006t0002g0002 a0001c0011t0006g0004 a0003c0008t0002g0002 a0004c0010t0029g0004	147	HG00280.hp1 HG00423.hp1 HG00423.hp2 others(144): Show HG00280.hp1 HG00423.hp1 HG00423.hp2 HG00438.hp2 HG00544.hp1 HG00544.hp2 HG00558.hp1 HG00597.hp1 HG00597.hp2 HG00609.hp1 HG00642.hp2 HG00673.hp1 HG00733.hp1 HG00735.hp2 HG00738.hp1 HG00738.hp2 HG00741.hp1 HG01109.hp1 HG01123.hp2 HG01168.hp1 HG01255.hp2 HG01257.hp1 HG01257.hp2 HG01258.hp2 HG01346.hp2 HG01516.hp2 HG01934.hp2 HG01943.hp2 HG01952.hp2 HG01975.hp1 HG01975.hp2 HG01981.hp2 HG01993.hp1 HG02004.hp2 HG02015.hp1 HG02027.hp1 HG02055.hp2 HG02056.hp1 HG02074.hp1 HG02083.hp2 HG02109.hp2 HG02129.hp1 HG02129.hp2 HG02155.hp2 HG02165.hp2 HG02273.hp1 HG02300.hp2 HG02451.hp1 HG02559.hp1 HG02572.hp1 HG02615.hp1 HG02630.hp2 HG02647.hp2 HG02683.hp2 HG02698.hp2 HG02717.hp2 HG02738.hp1 HG02809.hp1 HG02809.hp2 HG02818.hp1 HG02886.hp2 HG02895.hp1 HG02895.hp2 HG02897.hp2 HG02922.hp2 HG02970.hp2 HG02976.hp1 HG02976.hp2 HG03017.hp1 HG03041.hp2 HG03098.hp1 HG03098.hp2 HG03139.hp1 HG03139.hp2 HG03195.hp1 HG03195.hp2 HG03209.hp1 HG03209.hp2 HG03239.hp1 HG03239.hp2 HG03453.hp2 HG03471.hp1 HG03471.hp2 HG03486.hp2 HG03516.hp1 HG03654.hp1 HG03669.hp1 HG03942.hp2 HG04184.hp1 HG04199.hp1 HG04199.hp2 HG04204.hp2 HG06807.hp1 NA18747.hp1 NA18906.hp1 NA18906.hp2 NA18940.hp2 NA18941.hp1 NA18941.hp2 NA18942.hp2 NA18944.hp2 NA18946.hp1 NA18947.hp2 NA18950.hp1 NA18954.hp2 NA18959.hp2 NA18961.hp2 NA18964.hp1 NA18966.hp1 NA18967.hp1 NA18968.hp2 NA18971.hp2 NA18977.hp1 NA18980.hp1 NA18985.hp1 NA18989.hp1 NA18990.hp1 NA18994.hp2 NA18998.hp2 NA19007.hp2 NA19009.hp1 NA19010.hp1 NA19011.hp1 NA19011.hp2 NA19030.hp1 NA19030.hp2 NA19043.hp2 NA19054.hp1 NA19054.hp2 NA19057.hp1 NA19058.hp2 NA19060.hp1 NA19060.hp2 NA19063.hp1 NA19063.hp2 NA19067.hp1 NA19074.hp1 NA19076.hp2 NA19079.hp1 NA19085.hp1 NA19087.hp2 NA19090.hp2 NA20129.hp2 NA20752.hp2 NA20905.hp1 NA21309.hp1 NA21309.hp2	intron_variant	MODIFIER	c.806+466A>G c.806+466A>G	SIX3	ENSG00000138083.5	transcript	ENST00000260653.5	protein_coding	1/1	chr2	44943376
chr2:44943410	A A	G G	1	a0001c0001t0001g0009 a0001c0001t0001g0009	2	HG02896.hp1 HG02965.hp1 HG02896.hp1 HG02965.hp1	intron_variant	MODIFIER	c.806+500A>G c.806+500A>G	SIX3	ENSG00000138083.5	transcript	ENST00000260653.5	protein_coding	1/1	chr2	44943410
chr2:44943895	G G	A A	1	a0001c0001t0020g0007 a0001c0001t0020g0007	4	HG01081.hp2 HG03130.hp1 HG03453.hp1 others(1): Show HG01081.hp2 HG03130.hp1 HG03453.hp1 NA20129.hp1	intron_variant	MODIFIER	c.807-673G>A c.807-673G>A	SIX3	ENSG00000138083.5	transcript	ENST00000260653.5	protein_coding	1/1	chr2	44943895
chr2:44943907	A A	C C	46	a0001c0001t0001g0013 a0001c0001t0002g0002 a0001c0001t0002g0018 others(43): Show a0001c0001t0001g0013 a0001c0001t0002g0002 a0001c0001t0002g0018 a0001c0001t0006g0004 a0001c0001t0012g0004 a0001c0001t0013g0002 a0001c0001t0014g0002 a0001c0001t0015g0002 a0001c0001t0017g0002 a0001c0001t0018g0002 a0001c0001t0018g0012 a0001c0001t0021g0002 a0001c0001t0021g0017 a0001c0001t0026g0002 a0001c0001t0029g0004 a0001c0001t0030g0002 a0001c0001t0034g0004 a0001c0001t0035g0004 a0001c0001t0040g0002 a0001c0001t0044g0002 a0001c0001t0045g0002 a0001c0001t0048g0002 a0001c0001t0049g0002 a0001c0001t0052g0002 a0001c0001t0062g0004 a0001c0001t0063g0004 a0001c0001t0064g0004 a0001c0001t0065g0004 a0001c0001t0067g0004 a0001c0002t0006g0004 a0001c0002t0034g0004 a0001c0002t0066g0004 a0001c0003t0011g0005 a0001c0003t0032g0005 a0001c0003t0059g0005 a0001c0003t0060g0005 a0001c0004t0002g0002 a0001c0004t0014g0002 a0001c0004t0026g0002 a0001c0005t0033g0008 a0001c0005t0068g0008 a0001c0005t0069g0008 a0001c0006t0002g0002 a0001c0011t0006g0004 a0003c0008t0002g0002 a0004c0010t0029g0004	161	HG00280.hp1 HG00423.hp1 HG00423.hp2 others(158): Show HG00280.hp1 HG00423.hp1 HG00423.hp2 HG00438.hp2 HG00544.hp1 HG00544.hp2 HG00558.hp1 HG00597.hp1 HG00597.hp2 HG00609.hp1 HG00642.hp2 HG00733.hp1 HG00735.hp2 HG00738.hp1 HG00738.hp2 HG00741.hp1 HG00741.hp2 HG01070.hp2 HG01109.hp1 HG01123.hp2 HG01167.hp1 HG01168.hp1 HG01169.hp1 HG01255.hp2 HG01257.hp1 HG01257.hp2 HG01258.hp2 HG01261.hp1 HG01346.hp2 HG01516.hp2 HG01934.hp2 HG01943.hp2 HG01952.hp1 HG01952.hp2 HG01975.hp1 HG01975.hp2 HG01981.hp2 HG01993.hp1 HG02004.hp2 HG02015.hp1 HG02027.hp1 HG02055.hp2 HG02056.hp1 HG02074.hp1 HG02083.hp2 HG02109.hp2 HG02129.hp1 HG02129.hp2 HG02155.hp2 HG02165.hp2 HG02273.hp1 HG02300.hp2 HG02451.hp1 HG02559.hp1 HG02572.hp1 HG02615.hp1 HG02630.hp2 HG02647.hp2 HG02683.hp2 HG02698.hp2 HG02717.hp2 HG02735.hp1 HG02738.hp1 HG02738.hp2 HG02809.hp1 HG02809.hp2 HG02818.hp1 HG02886.hp2 HG02895.hp1 HG02895.hp2 HG02897.hp2 HG02922.hp2 HG02970.hp2 HG02976.hp1 HG02976.hp2 HG03017.hp1 HG03041.hp2 HG03098.hp1 HG03098.hp2 HG03139.hp1 HG03139.hp2 HG03195.hp1 HG03195.hp2 HG03209.hp1 HG03209.hp2 HG03225.hp2 HG03239.hp1 HG03239.hp2 HG03453.hp2 HG03471.hp1 HG03471.hp2 HG03486.hp2 HG03516.hp1 HG03654.hp1 HG03669.hp1 HG03710.hp2 HG03831.hp1 HG03942.hp2 HG04184.hp1 HG04199.hp1 HG04199.hp2 HG04204.hp1 HG04204.hp2 HG06807.hp1 NA18747.hp1 NA18906.hp1 NA18906.hp2 NA18940.hp2 NA18941.hp1 NA18941.hp2 NA18942.hp2 NA18944.hp2 NA18946.hp1 NA18947.hp2 NA18950.hp1 NA18954.hp2 NA18959.hp2 NA18961.hp2 NA18964.hp1 NA18966.hp1 NA18967.hp1 NA18968.hp1 NA18968.hp2 NA18971.hp2 NA18977.hp1 NA18980.hp1 NA18985.hp1 NA18989.hp1 NA18990.hp1 NA18994.hp2 NA18998.hp2 NA19007.hp2 NA19009.hp1 NA19010.hp1 NA19011.hp1 NA19011.hp2 NA19030.hp1 NA19030.hp2 NA19043.hp2 NA19054.hp1 NA19054.hp2 NA19057.hp1 NA19058.hp2 NA19060.hp1 NA19060.hp2 NA19063.hp1 NA19063.hp2 NA19064.hp2 NA19067.hp1 NA19072.hp2 NA19074.hp1 NA19076.hp2 NA19079.hp1 NA19085.hp1 NA19087.hp2 NA19090.hp2 NA20129.hp2 NA20752.hp2 NA20905.hp1 NA21309.hp1 NA21309.hp2	intron_variant	MODIFIER	c.807-661A>C c.807-661A>C	SIX3	ENSG00000138083.5	transcript	ENST00000260653.5	protein_coding	1/1	chr2	44943907
chr2:44943991	A A	G G	4	a0001c0001t0005g0006 a0001c0001t0008g0006 a0001c0001t0016g0006 others(1): Show a0001c0001t0005g0006 a0001c0001t0008g0006 a0001c0001t0016g0006 a0001c0001t0061g0006	6	NA18949.hp2 NA18974.hp1 NA18986.hp1 others(3): Show NA18949.hp2 NA18974.hp1 NA18986.hp1 NA19004.hp1 NA19005.hp2 NA19059.hp1	intron_variant	MODIFIER	c.807-577A>G c.807-577A>G	SIX3	ENSG00000138083.5	transcript	ENST00000260653.5	protein_coding	1/1	chr2	44943991
chr2:44944221	G G	A A	45	a0001c0001t0002g0002 a0001c0001t0002g0018 a0001c0001t0006g0004 others(42): Show a0001c0001t0002g0002 a0001c0001t0002g0018 a0001c0001t0006g0004 a0001c0001t0012g0004 a0001c0001t0013g0002 a0001c0001t0014g0002 a0001c0001t0015g0002 a0001c0001t0017g0002 a0001c0001t0018g0002 a0001c0001t0018g0012 a0001c0001t0021g0002 a0001c0001t0021g0017 a0001c0001t0026g0002 a0001c0001t0029g0004 a0001c0001t0030g0002 a0001c0001t0034g0004 a0001c0001t0035g0004 a0001c0001t0040g0002 a0001c0001t0044g0002 a0001c0001t0045g0002 a0001c0001t0048g0002 a0001c0001t0049g0002 a0001c0001t0052g0002 a0001c0001t0062g0004 a0001c0001t0063g0004 a0001c0001t0064g0004 a0001c0001t0065g0004 a0001c0001t0067g0004 a0001c0002t0006g0004 a0001c0002t0034g0004 a0001c0002t0066g0004 a0001c0003t0011g0005 a0001c0003t0032g0005 a0001c0003t0059g0005 a0001c0003t0060g0005 a0001c0004t0002g0002 a0001c0004t0014g0002 a0001c0004t0026g0002 a0001c0005t0033g0008 a0001c0005t0068g0008 a0001c0005t0069g0008 a0001c0006t0002g0002 a0001c0011t0006g0004 a0003c0008t0002g0002 a0004c0010t0029g0004	160	HG00280.hp1 HG00423.hp1 HG00423.hp2 others(157): Show HG00280.hp1 HG00423.hp1 HG00423.hp2 HG00438.hp2 HG00544.hp1 HG00544.hp2 HG00558.hp1 HG00597.hp1 HG00597.hp2 HG00609.hp1 HG00642.hp2 HG00733.hp1 HG00735.hp2 HG00738.hp1 HG00738.hp2 HG00741.hp1 HG00741.hp2 HG01070.hp2 HG01109.hp1 HG01123.hp2 HG01167.hp1 HG01168.hp1 HG01169.hp1 HG01255.hp2 HG01257.hp1 HG01257.hp2 HG01258.hp2 HG01261.hp1 HG01346.hp2 HG01516.hp2 HG01934.hp2 HG01943.hp2 HG01952.hp1 HG01952.hp2 HG01975.hp1 HG01975.hp2 HG01981.hp2 HG01993.hp1 HG02004.hp2 HG02015.hp1 HG02027.hp1 HG02055.hp2 HG02056.hp1 HG02074.hp1 HG02083.hp2 HG02109.hp2 HG02129.hp1 HG02129.hp2 HG02155.hp2 HG02165.hp2 HG02273.hp1 HG02300.hp2 HG02451.hp1 HG02559.hp1 HG02572.hp1 HG02615.hp1 HG02630.hp2 HG02647.hp2 HG02683.hp2 HG02698.hp2 HG02717.hp2 HG02735.hp1 HG02738.hp1 HG02809.hp1 HG02809.hp2 HG02818.hp1 HG02886.hp2 HG02895.hp1 HG02895.hp2 HG02897.hp2 HG02922.hp2 HG02970.hp2 HG02976.hp1 HG02976.hp2 HG03017.hp1 HG03041.hp2 HG03098.hp1 HG03098.hp2 HG03139.hp1 HG03139.hp2 HG03195.hp1 HG03195.hp2 HG03209.hp1 HG03209.hp2 HG03225.hp2 HG03239.hp1 HG03239.hp2 HG03453.hp2 HG03471.hp1 HG03471.hp2 HG03486.hp2 HG03516.hp1 HG03654.hp1 HG03669.hp1 HG03710.hp2 HG03831.hp1 HG03942.hp2 HG04184.hp1 HG04199.hp1 HG04199.hp2 HG04204.hp1 HG04204.hp2 HG06807.hp1 NA18747.hp1 NA18906.hp1 NA18906.hp2 NA18940.hp2 NA18941.hp1 NA18941.hp2 NA18942.hp2 NA18944.hp2 NA18946.hp1 NA18947.hp2 NA18950.hp1 NA18954.hp2 NA18959.hp2 NA18961.hp2 NA18964.hp1 NA18966.hp1 NA18967.hp1 NA18968.hp1 NA18968.hp2 NA18971.hp2 NA18977.hp1 NA18980.hp1 NA18985.hp1 NA18989.hp1 NA18990.hp1 NA18994.hp2 NA18998.hp2 NA19007.hp2 NA19009.hp1 NA19010.hp1 NA19011.hp1 NA19011.hp2 NA19030.hp1 NA19030.hp2 NA19043.hp2 NA19054.hp1 NA19054.hp2 NA19057.hp1 NA19058.hp2 NA19060.hp1 NA19060.hp2 NA19063.hp1 NA19063.hp2 NA19064.hp2 NA19067.hp1 NA19072.hp2 NA19074.hp1 NA19076.hp2 NA19079.hp1 NA19085.hp1 NA19087.hp2 NA19090.hp2 NA20129.hp2 NA20752.hp2 NA20905.hp1 NA21309.hp1 NA21309.hp2	intron_variant	MODIFIER	c.807-347G>A c.807-347G>A	SIX3	ENSG00000138083.5	transcript	ENST00000260653.5	protein_coding	1/1	chr2	44944221
chr2:44944407	C C	T T	23	a0001c0001t0002g0002 a0001c0001t0002g0015 a0001c0001t0002g0018 others(20): Show a0001c0001t0002g0002 a0001c0001t0002g0015 a0001c0001t0002g0018 a0001c0001t0013g0002 a0001c0001t0014g0002 a0001c0001t0015g0002 a0001c0001t0017g0002 a0001c0001t0018g0002 a0001c0001t0018g0012 a0001c0001t0021g0002 a0001c0001t0026g0002 a0001c0001t0030g0002 a0001c0001t0040g0002 a0001c0001t0044g0002 a0001c0001t0045g0002 a0001c0001t0048g0002 a0001c0001t0049g0002 a0001c0001t0052g0002 a0001c0004t0002g0002 a0001c0004t0014g0002 a0001c0004t0026g0002 a0001c0006t0002g0002 a0003c0008t0002g0002	109	HG00280.hp1 HG00423.hp1 HG00438.hp2 others(106): Show HG00280.hp1 HG00423.hp1 HG00438.hp2 HG00544.hp1 HG00544.hp2 HG00558.hp1 HG00597.hp1 HG00609.hp1 HG00642.hp2 HG00735.hp2 HG00738.hp1 HG00738.hp2 HG00741.hp1 HG01109.hp1 HG01123.hp2 HG01255.hp2 HG01257.hp1 HG01258.hp2 HG01346.hp2 HG01934.hp2 HG01943.hp2 HG01952.hp2 HG01975.hp2 HG01981.hp2 HG01993.hp1 HG02004.hp2 HG02015.hp1 HG02027.hp1 HG02055.hp2 HG02056.hp1 HG02074.hp1 HG02083.hp2 HG02109.hp2 HG02129.hp1 HG02129.hp2 HG02155.hp2 HG02165.hp2 HG02273.hp1 HG02572.hp1 HG02630.hp2 HG02647.hp2 HG02683.hp2 HG02738.hp1 HG02809.hp2 HG02895.hp2 HG02897.hp2 HG02922.hp2 HG02976.hp1 HG03017.hp1 HG03041.hp2 HG03139.hp1 HG03139.hp2 HG03195.hp1 HG03195.hp2 HG03225.hp2 HG03239.hp1 HG03239.hp2 HG03516.hp1 HG03669.hp1 HG03942.hp2 HG04184.hp1 HG04199.hp1 HG04204.hp2 HG06807.hp1 NA18747.hp1 NA18906.hp1 NA18906.hp2 NA18940.hp2 NA18941.hp1 NA18941.hp2 NA18942.hp2 NA18946.hp1 NA18947.hp2 NA18950.hp1 NA18959.hp2 NA18961.hp2 NA18964.hp1 NA18966.hp1 NA18967.hp1 NA18968.hp2 NA18971.hp2 NA18980.hp1 NA18985.hp1 NA18989.hp1 NA18990.hp1 NA18994.hp2 NA18995.hp2 NA19007.hp2 NA19009.hp1 NA19010.hp1 NA19011.hp1 NA19030.hp2 NA19054.hp2 NA19057.hp1 NA19058.hp2 NA19060.hp1 NA19060.hp2 NA19063.hp1 NA19063.hp2 NA19067.hp1 NA19074.hp1 NA19076.hp2 NA19079.hp1 NA19085.hp1 NA19087.hp2 NA19090.hp2 NA20129.hp2 NA20752.hp2 NA20905.hp1	intron_variant	MODIFIER	c.807-161C>T c.807-161C>T	SIX3	ENSG00000138083.5	transcript	ENST00000260653.5	protein_coding	1/1	chr2	44944407
chr2:44944434	G G	A A	2	a0001c0001t0003g0014 a0001c0001t0009g0011 a0001c0001t0003g0014 a0001c0001t0009g0011	2	HG02602.hp2 NA19083.hp2 HG02602.hp2 NA19083.hp2	intron_variant	MODIFIER	c.807-134G>A c.807-134G>A	SIX3	ENSG00000138083.5	transcript	ENST00000260653.5	protein_coding	1/1	chr2	44944434
chr2:44944511	G G	A A	1	a0001c0001t0002g0018 a0001c0001t0002g0018	1	NA19054.hp2 NA19054.hp2	intron_variant	MODIFIER	c.807-57G>A c.807-57G>A	SIX3	ENSG00000138083.5	transcript	ENST00000260653.5	protein_coding	1/1	chr2	44944511

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🧬 JoGo Online Haplotype Explorer SIX3_chr2_44936702_44951071

JoGo Local Haplotype Explorer (on iGV) SIX3_chr2_44936702_44951071

Translation Multiple Alignment View

🧬 Gene Summary

AAmino acid(protein) Level Haplotype Info (Total: 5)

CCoding Level Haplotype Info (Total: 11)

TTranscript Level Haplotype Info (Total: 69)

GGenebody Level Haplotype Info (Total: 18)

A C AC Level (Amino Acid + Coding) Haplotype Info (Total: 11)

A C T ACT Level (Amino Acid + Coding + Transcript) Haplotype Info (Total: 80)

A C T G ACTG Level (Amino Acid + Coding + Transcript + Genebody) Haplotype Info (Total: 99)

Haplotype Details by Sample (Haploid Level) (Total: 448)

AAmino acid(protein) Level Haplotype Related Variants (Effect to Protein Coding Variants) (Total: 4)

CCoding Level Variants (Synonymous Mutations) (Total: 6)

TTranscript Level Haplotype Variants (5'UTR+3'UTR) (Total: 37)

GGenebody Level Haplotype Variants (Intron) (Total: 15)

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Annotation (Repeats)

Annotation (SNP Array)