Joint Open Genome and Omics Platform (JoGo)

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geneid	5127
ensemblid	ENSG00000102225.17
hgncid	8749
symbol	CDK16
name	cyclin dependent kinase 16
refseq_nuc	NM_006201.5
refseq_prot	NP_006192.1
ensembl_nuc	ENST00000357227.9
ensembl_prot	ENSP00000349762.4
mane_status	MANE Select
chr	chrX
start	47218681
end	47229997
strand	+
ver	v1.2
region	chrX:47218681-47229997
region5000	chrX:47213681-47234997
regionname0	CDK16_chrX_47218681_47229997
regionname5000	CDK16_chrX_47213681_47234997

ahapid	grch38/ chm13v2	alen	total	AFR	AMR	EAS	EUR	SAS	JPT	regionname	genename	aa	chr	start	end
a0001	1/1	496	303	79	55	130	9	28	96	CDK16_chrX_47213681_47234997	CDK16	copy fasta	chrX	47213681	47234997
a0002	0/0	496	5	0	0	5	0	0	4	CDK16_chrX_47213681_47234997	CDK16	copy fasta	chrX	47213681	47234997
a0003	0/0	322	1	1	0	0	0	0	0	CDK16_chrX_47213681_47234997	CDK16	copy fasta	chrX	47213681	47234997
a0004	0/0	408	1	0	0	1	0	0	1	CDK16_chrX_47213681_47234997	CDK16	copy fasta	chrX	47213681	47234997
a0005	0/0	330	1	0	0	1	0	0	1	CDK16_chrX_47213681_47234997	CDK16	copy fasta	chrX	47213681	47234997
a0006	0/0	496	1	0	1	0	0	0	0	CDK16_chrX_47213681_47234997	CDK16	copy fasta	chrX	47213681	47234997

chapid	grch38/ chm13v2	clen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	cseq	chr	start	end
c0001	1/1	1491	279	60	50	130	9	28	CDK16_chrX_47213681_47234997	CDK16	copy fasta	chrX	47213681	47234997
c0002	0/0	1491	24	19	5	0	0	0	CDK16_chrX_47213681_47234997	CDK16	copy fasta	chrX	47213681	47234997
c0003	0/0	1491	5	0	0	5	0	0	CDK16_chrX_47213681_47234997	CDK16	copy fasta	chrX	47213681	47234997
c0004	0/0	1490	1	1	0	0	0	0	CDK16_chrX_47213681_47234997	CDK16	copy fasta	chrX	47213681	47234997
c0005	0/0	1487	1	0	0	1	0	0	CDK16_chrX_47213681_47234997	CDK16	copy fasta	chrX	47213681	47234997
c0006	0/0	1492	1	0	0	1	0	0	CDK16_chrX_47213681_47234997	CDK16	copy fasta	chrX	47213681	47234997
c0007	0/0	1491	1	0	1	0	0	0	CDK16_chrX_47213681_47234997	CDK16	copy fasta	chrX	47213681	47234997

thapid	grch38 chm13v2	tlen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	tseq	chr	start	end
t0001	1/1	1661	251	47	47	120	9	26	CDK16_chrX_47213681_47234997	CDK16	copy fasta	chrX	47213681	47234997
t0002	0/0	1661	9	7	2	0	0	0	CDK16_chrX_47213681_47234997	CDK16	copy fasta	chrX	47213681	47234997
t0003	0/0	1661	8	0	0	8	0	0	CDK16_chrX_47213681_47234997	CDK16	copy fasta	chrX	47213681	47234997
t0004	0/0	1661	6	4	2	0	0	0	CDK16_chrX_47213681_47234997	CDK16	copy fasta	chrX	47213681	47234997
t0005	0/0	1660	6	0	0	5	0	1	CDK16_chrX_47213681_47234997	CDK16	copy fasta	chrX	47213681	47234997
t0006	0/0	1661	5	4	1	0	0	0	CDK16_chrX_47213681_47234997	CDK16	copy fasta	chrX	47213681	47234997
t0007	0/0	1660	4	2	1	1	0	0	CDK16_chrX_47213681_47234997	CDK16	copy fasta	chrX	47213681	47234997
t0008	0/0	1661	3	2	1	0	0	0	CDK16_chrX_47213681_47234997	CDK16	copy fasta	chrX	47213681	47234997
t0009	0/0	1661	3	3	0	0	0	0	CDK16_chrX_47213681_47234997	CDK16	copy fasta	chrX	47213681	47234997
t0010	0/0	1662	3	0	2	1	0	0	CDK16_chrX_47213681_47234997	CDK16	copy fasta	chrX	47213681	47234997
t0011	0/0	1661	2	2	0	0	0	0	CDK16_chrX_47213681_47234997	CDK16	copy fasta	chrX	47213681	47234997
t0012	0/0	1661	2	2	0	0	0	0	CDK16_chrX_47213681_47234997	CDK16	copy fasta	chrX	47213681	47234997
t0013	0/0	1661	2	2	0	0	0	0	CDK16_chrX_47213681_47234997	CDK16	copy fasta	chrX	47213681	47234997
t0014	0/0	1661	1	1	0	0	0	0	CDK16_chrX_47213681_47234997	CDK16	copy fasta	chrX	47213681	47234997
t0015	0/0	1660	1	1	0	0	0	0	CDK16_chrX_47213681_47234997	CDK16	copy fasta	chrX	47213681	47234997
t0016	0/0	1661	1	0	0	0	0	1	CDK16_chrX_47213681_47234997	CDK16	copy fasta	chrX	47213681	47234997
t0017	0/0	1661	1	1	0	0	0	0	CDK16_chrX_47213681_47234997	CDK16	copy fasta	chrX	47213681	47234997
t0018	0/0	1661	1	0	0	1	0	0	CDK16_chrX_47213681_47234997	CDK16	copy fasta	chrX	47213681	47234997
t0019	0/0	1661	1	1	0	0	0	0	CDK16_chrX_47213681_47234997	CDK16	copy fasta	chrX	47213681	47234997
t0020	0/0	1661	1	1	0	0	0	0	CDK16_chrX_47213681_47234997	CDK16	copy fasta	chrX	47213681	47234997
t0021	0/0	1663	1	0	0	1	0	0	CDK16_chrX_47213681_47234997	CDK16	copy fasta	chrX	47213681	47234997

ghapid	grch38/ chm13v2	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	chr	start	end
g0001	0/1	58	9	8	32	1	7	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
g0002	1/0	37	8	6	14	1	7	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
g0003	0/0	25	3	6	13	3	0	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
g0004	0/0	13	13	0	0	0	0	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
g0005	0/0	13	1	1	8	1	2	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
g0006	0/0	10	8	2	0	0	0	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
g0007	0/0	8	0	0	8	0	0	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
g0008	0/0	7	6	1	0	0	0	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
g0009	0/0	7	0	7	0	0	0	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
g0010	0/0	6	0	0	6	0	0	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
g0011	0/0	6	0	0	5	0	1	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
g0012	0/0	5	0	2	0	1	2	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
g0013	0/0	5	0	0	5	0	0	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
g0014	0/0	5	1	1	2	0	1	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
g0015	0/0	4	4	0	0	0	0	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
g0016	0/0	4	0	3	1	0	0	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
g0017	0/0	4	0	0	4	0	0	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
g0018	0/0	4	0	0	4	0	0	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
g0019	0/0	3	0	2	0	0	1	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
g0020	0/0	3	1	0	1	0	1	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
g0021	0/0	2	2	0	0	0	0	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
g0022	0/0	2	1	1	0	0	0	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
g0023	0/0	2	0	0	2	0	0	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
g0024	0/0	2	0	0	2	0	0	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
g0025	0/0	2	0	0	2	0	0	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
g0026	0/0	2	0	1	1	0	0	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
g0027	0/0	2	0	1	0	1	0	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
g0028	0/0	2	0	0	2	0	0	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
g0029	0/0	2	1	0	1	0	0	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
g0030	0/0	2	0	0	2	0	0	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
g0031	0/0	2	2	0	0	0	0	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
g0032	0/0	2	0	1	0	1	0	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
g0033	0/0	2	2	0	0	0	0	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
g0034	0/0	1	1	0	0	0	0	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
g0035	0/0	1	1	0	0	0	0	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
g0036	0/0	1	1	0	0	0	0	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
g0037	0/0	1	0	1	0	0	0	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
g0038	0/0	1	1	0	0	0	0	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
g0039	0/0	1	1	0	0	0	0	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
g0040	0/0	1	1	0	0	0	0	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
g0041	0/0	1	0	1	0	0	0	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
g0042	0/0	1	1	0	0	0	0	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
g0043	0/0	1	0	0	1	0	0	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
g0044	0/0	1	1	0	0	0	0	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
g0045	0/0	1	1	0	0	0	0	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
g0046	0/0	1	0	0	1	0	0	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
g0047	0/0	1	1	0	0	0	0	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
g0048	0/0	1	0	0	1	0	0	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
g0049	0/0	1	0	0	1	0	0	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
g0050	0/0	1	0	0	0	0	1	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
g0051	0/0	1	1	0	0	0	0	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
g0052	0/0	1	0	0	1	0	0	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
g0053	0/0	1	0	0	0	0	1	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
g0054	0/0	1	0	1	0	0	0	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
g0055	0/0	1	1	0	0	0	0	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
g0056	0/0	1	0	0	1	0	0	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
g0057	0/0	1	0	0	1	0	0	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
g0058	0/0	1	0	0	0	0	1	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
g0059	0/0	1	0	0	1	0	0	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
g0060	0/0	1	0	1	0	0	0	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
g0061	0/0	1	0	1	0	0	0	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
g0062	0/0	1	0	0	1	0	0	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
g0063	0/0	1	0	0	1	0	0	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
g0064	0/0	1	0	1	0	0	0	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
g0065	0/0	1	0	0	1	0	0	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
g0066	0/0	1	0	1	0	0	0	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
g0067	0/0	1	0	0	1	0	0	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
g0068	0/0	1	0	0	1	0	0	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
g0069	0/0	1	0	0	1	0	0	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
g0070	0/0	1	0	0	1	0	0	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
g0071	0/0	1	0	0	1	0	0	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
g0072	0/0	1	0	0	1	0	0	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
g0073	0/0	1	0	0	1	0	0	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
g0074	0/0	1	0	0	1	0	0	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
g0075	0/0	1	0	0	1	0	0	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
g0076	0/0	1	0	0	1	0	0	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
g0077	0/0	1	1	0	0	0	0	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
g0078	0/0	1	1	0	0	0	0	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
g0079	0/0	1	0	0	1	0	0	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
g0080	0/0	1	0	1	0	0	0	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
g0081	0/0	1	0	1	0	0	0	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
g0082	0/0	1	0	0	0	0	1	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
g0083	0/0	1	1	0	0	0	0	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
g0084	0/0	1	1	0	0	0	0	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
g0085	0/0	1	0	0	0	0	1	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
g0086	0/0	1	0	1	0	0	0	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
g0087	0/0	1	0	1	0	0	0	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
g0088	0/0	1	1	0	0	0	0	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
g0089	0/0	1	1	0	0	0	0	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
g0090	0/0	1	0	1	0	0	0	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
g0091	0/0	1	0	1	0	0	0	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
g0092	0/0	1	0	0	0	0	1	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997

achapid	grch38/ chm13v2	clen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	cseq	chr	start	end
a0001c0001	1/1	1491	279	60	50	130	9	28	CDK16_chrX_47213681_47234997	CDK16	copy fasta	chrX	47213681	47234997
a0001c0002	0/0	1491	24	19	5	0	0	0	CDK16_chrX_47213681_47234997	CDK16	copy fasta	chrX	47213681	47234997
a0002c0003	0/0	1491	5	0	0	5	0	0	CDK16_chrX_47213681_47234997	CDK16	copy fasta	chrX	47213681	47234997
a0003c0004	0/0	1490	1	1	0	0	0	0	CDK16_chrX_47213681_47234997	CDK16	copy fasta	chrX	47213681	47234997
a0004c0005	0/0	1487	1	0	0	1	0	0	CDK16_chrX_47213681_47234997	CDK16	copy fasta	chrX	47213681	47234997
a0005c0006	0/0	1492	1	0	0	1	0	0	CDK16_chrX_47213681_47234997	CDK16	copy fasta	chrX	47213681	47234997
a0006c0007	0/0	1491	1	0	1	0	0	0	CDK16_chrX_47213681_47234997	CDK16	copy fasta	chrX	47213681	47234997

acthapid	grch38 chm13v2	tlen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	tseq	chr	start	end
a0001c0001t0001	1/1	3151	242	46	46	113	9	26	CDK16_chrX_47213681_47234997	CDK16	copy fasta	chrX	47213681	47234997
a0001c0001t0003	0/0	3151	8	0	0	8	0	0	CDK16_chrX_47213681_47234997	CDK16	copy fasta	chrX	47213681	47234997
a0001c0001t0005	0/0	3150	6	0	0	5	0	1	CDK16_chrX_47213681_47234997	CDK16	copy fasta	chrX	47213681	47234997
a0001c0001t0006	0/0	3151	5	4	1	0	0	0	CDK16_chrX_47213681_47234997	CDK16	copy fasta	chrX	47213681	47234997
a0001c0001t0007	0/0	3150	4	2	1	1	0	0	CDK16_chrX_47213681_47234997	CDK16	copy fasta	chrX	47213681	47234997
a0001c0001t0009	0/0	3151	3	3	0	0	0	0	CDK16_chrX_47213681_47234997	CDK16	copy fasta	chrX	47213681	47234997
a0001c0001t0010	0/0	3152	3	0	2	1	0	0	CDK16_chrX_47213681_47234997	CDK16	copy fasta	chrX	47213681	47234997
a0001c0001t0012	0/0	3151	2	2	0	0	0	0	CDK16_chrX_47213681_47234997	CDK16	copy fasta	chrX	47213681	47234997
a0001c0001t0016	0/0	3151	1	0	0	0	0	1	CDK16_chrX_47213681_47234997	CDK16	copy fasta	chrX	47213681	47234997
a0001c0001t0017	0/0	3151	1	1	0	0	0	0	CDK16_chrX_47213681_47234997	CDK16	copy fasta	chrX	47213681	47234997
a0001c0001t0018	0/0	3151	1	0	0	1	0	0	CDK16_chrX_47213681_47234997	CDK16	copy fasta	chrX	47213681	47234997
a0001c0001t0019	0/0	3151	1	1	0	0	0	0	CDK16_chrX_47213681_47234997	CDK16	copy fasta	chrX	47213681	47234997
a0001c0001t0020	0/0	3151	1	1	0	0	0	0	CDK16_chrX_47213681_47234997	CDK16	copy fasta	chrX	47213681	47234997
a0001c0001t0021	0/0	3153	1	0	0	1	0	0	CDK16_chrX_47213681_47234997	CDK16	copy fasta	chrX	47213681	47234997
a0001c0002t0001	0/0	3151	1	1	0	0	0	0	CDK16_chrX_47213681_47234997	CDK16	copy fasta	chrX	47213681	47234997
a0001c0002t0002	0/0	3151	9	7	2	0	0	0	CDK16_chrX_47213681_47234997	CDK16	copy fasta	chrX	47213681	47234997
a0001c0002t0004	0/0	3151	6	4	2	0	0	0	CDK16_chrX_47213681_47234997	CDK16	copy fasta	chrX	47213681	47234997
a0001c0002t0008	0/0	3151	3	2	1	0	0	0	CDK16_chrX_47213681_47234997	CDK16	copy fasta	chrX	47213681	47234997
a0001c0002t0011	0/0	3151	2	2	0	0	0	0	CDK16_chrX_47213681_47234997	CDK16	copy fasta	chrX	47213681	47234997
a0001c0002t0013	0/0	3151	2	2	0	0	0	0	CDK16_chrX_47213681_47234997	CDK16	copy fasta	chrX	47213681	47234997
a0001c0002t0014	0/0	3151	1	1	0	0	0	0	CDK16_chrX_47213681_47234997	CDK16	copy fasta	chrX	47213681	47234997
a0002c0003t0001	0/0	3151	5	0	0	5	0	0	CDK16_chrX_47213681_47234997	CDK16	copy fasta	chrX	47213681	47234997
a0003c0004t0015	0/0	3149	1	1	0	0	0	0	CDK16_chrX_47213681_47234997	CDK16	copy fasta	chrX	47213681	47234997
a0004c0005t0001	0/0	3147	1	0	0	1	0	0	CDK16_chrX_47213681_47234997	CDK16	copy fasta	chrX	47213681	47234997
a0005c0006t0001	0/0	3152	1	0	0	1	0	0	CDK16_chrX_47213681_47234997	CDK16	copy fasta	chrX	47213681	47234997
a0006c0007t0001	0/0	3151	1	0	1	0	0	0	CDK16_chrX_47213681_47234997	CDK16	copy fasta	chrX	47213681	47234997

actghapid	grch38/ chm13v2	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	chr	start	end
a0001c0001t0001g0001	0/1	47	8	7	24	1	6	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
a0001c0001t0001g0002	1/0	36	7	6	14	1	7	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
a0001c0001t0001g0003	0/0	24	3	5	13	3	0	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
a0001c0001t0001g0004	0/0	12	12	0	0	0	0	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
a0001c0001t0001g0005	0/0	11	1	1	6	1	2	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
a0001c0001t0001g0007	0/0	1	0	0	1	0	0	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
a0001c0001t0001g0009	0/0	7	0	7	0	0	0	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
a0001c0001t0001g0010	0/0	6	0	0	6	0	0	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
a0001c0001t0001g0011	0/0	5	0	0	4	0	1	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
a0001c0001t0001g0012	0/0	5	0	2	0	1	2	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
a0001c0001t0001g0013	0/0	5	0	0	5	0	0	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
a0001c0001t0001g0014	0/0	5	1	1	2	0	1	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
a0001c0001t0001g0015	0/0	4	4	0	0	0	0	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
a0001c0001t0001g0016	0/0	4	0	3	1	0	0	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
a0001c0001t0001g0017	0/0	4	0	0	4	0	0	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
a0001c0001t0001g0018	0/0	3	0	0	3	0	0	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
a0001c0001t0001g0019	0/0	2	0	2	0	0	0	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
a0001c0001t0001g0020	0/0	3	1	0	1	0	1	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
a0001c0001t0001g0021	0/0	1	1	0	0	0	0	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
a0001c0001t0001g0023	0/0	2	0	0	2	0	0	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
a0001c0001t0001g0024	0/0	2	0	0	2	0	0	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
a0001c0001t0001g0025	0/0	1	0	0	1	0	0	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
a0001c0001t0001g0026	0/0	1	0	0	1	0	0	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
a0001c0001t0001g0027	0/0	2	0	1	0	1	0	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
a0001c0001t0001g0028	0/0	2	0	0	2	0	0	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
a0001c0001t0001g0029	0/0	1	0	0	1	0	0	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
a0001c0001t0001g0030	0/0	2	0	0	2	0	0	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
a0001c0001t0001g0032	0/0	2	0	1	0	1	0	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
a0001c0001t0001g0034	0/0	1	1	0	0	0	0	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
a0001c0001t0001g0036	0/0	1	1	0	0	0	0	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
a0001c0001t0001g0037	0/0	1	0	1	0	0	0	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
a0001c0001t0001g0043	0/0	1	0	0	1	0	0	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
a0001c0001t0001g0046	0/0	1	0	0	1	0	0	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
a0001c0001t0001g0047	0/0	1	1	0	0	0	0	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
a0001c0001t0001g0048	0/0	1	0	0	1	0	0	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
a0001c0001t0001g0050	0/0	1	0	0	0	0	1	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
a0001c0001t0001g0052	0/0	1	0	0	1	0	0	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
a0001c0001t0001g0053	0/0	1	0	0	0	0	1	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
a0001c0001t0001g0054	0/0	1	0	1	0	0	0	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
a0001c0001t0001g0055	0/0	1	1	0	0	0	0	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
a0001c0001t0001g0056	0/0	1	0	0	1	0	0	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
a0001c0001t0001g0057	0/0	1	0	0	1	0	0	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
a0001c0001t0001g0058	0/0	1	0	0	0	0	1	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
a0001c0001t0001g0059	0/0	1	0	0	1	0	0	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
a0001c0001t0001g0060	0/0	1	0	1	0	0	0	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
a0001c0001t0001g0061	0/0	1	0	1	0	0	0	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
a0001c0001t0001g0062	0/0	1	0	0	1	0	0	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
a0001c0001t0001g0063	0/0	1	0	0	1	0	0	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
a0001c0001t0001g0064	0/0	1	0	1	0	0	0	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
a0001c0001t0001g0065	0/0	1	0	0	1	0	0	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
a0001c0001t0001g0066	0/0	1	0	1	0	0	0	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
a0001c0001t0001g0067	0/0	1	0	0	1	0	0	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
a0001c0001t0001g0068	0/0	1	0	0	1	0	0	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
a0001c0001t0001g0071	0/0	1	0	0	1	0	0	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
a0001c0001t0001g0072	0/0	1	0	0	1	0	0	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
a0001c0001t0001g0073	0/0	1	0	0	1	0	0	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
a0001c0001t0001g0074	0/0	1	0	0	1	0	0	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
a0001c0001t0001g0075	0/0	1	0	0	1	0	0	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
a0001c0001t0001g0077	0/0	1	1	0	0	0	0	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
a0001c0001t0001g0078	0/0	1	1	0	0	0	0	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
a0001c0001t0001g0079	0/0	1	0	0	1	0	0	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
a0001c0001t0001g0080	0/0	1	0	1	0	0	0	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
a0001c0001t0001g0081	0/0	1	0	1	0	0	0	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
a0001c0001t0001g0082	0/0	1	0	0	0	0	1	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
a0001c0001t0001g0083	0/0	1	1	0	0	0	0	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
a0001c0001t0001g0085	0/0	1	0	0	0	0	1	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
a0001c0001t0001g0086	0/0	1	0	1	0	0	0	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
a0001c0001t0001g0089	0/0	1	1	0	0	0	0	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
a0001c0001t0001g0090	0/0	1	0	1	0	0	0	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
a0001c0001t0001g0092	0/0	1	0	0	0	0	1	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
a0001c0001t0003g0007	0/0	7	0	0	7	0	0	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
a0001c0001t0003g0076	0/0	1	0	0	1	0	0	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
a0001c0001t0005g0001	0/0	3	0	0	2	0	1	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
a0001c0001t0005g0005	0/0	1	0	0	1	0	0	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
a0001c0001t0005g0011	0/0	1	0	0	1	0	0	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
a0001c0001t0005g0025	0/0	1	0	0	1	0	0	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
a0001c0001t0006g0033	0/0	2	2	0	0	0	0	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
a0001c0001t0006g0044	0/0	1	1	0	0	0	0	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
a0001c0001t0006g0087	0/0	1	0	1	0	0	0	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
a0001c0001t0006g0088	0/0	1	1	0	0	0	0	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
a0001c0001t0007g0002	0/0	1	1	0	0	0	0	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
a0001c0001t0007g0003	0/0	1	0	1	0	0	0	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
a0001c0001t0007g0005	0/0	1	0	0	1	0	0	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
a0001c0001t0007g0021	0/0	1	1	0	0	0	0	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
a0001c0001t0009g0031	0/0	2	2	0	0	0	0	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
a0001c0001t0009g0084	0/0	1	1	0	0	0	0	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
a0001c0001t0010g0018	0/0	1	0	0	1	0	0	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
a0001c0001t0010g0026	0/0	1	0	1	0	0	0	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
a0001c0001t0010g0091	0/0	1	0	1	0	0	0	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
a0001c0001t0012g0004	0/0	1	1	0	0	0	0	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
a0001c0001t0012g0051	0/0	1	1	0	0	0	0	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
a0001c0001t0016g0019	0/0	1	0	0	0	0	1	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
a0001c0001t0017g0045	0/0	1	1	0	0	0	0	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
a0001c0001t0018g0001	0/0	1	0	0	1	0	0	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
a0001c0001t0019g0029	0/0	1	1	0	0	0	0	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
a0001c0001t0020g0001	0/0	1	1	0	0	0	0	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
a0001c0001t0021g0069	0/0	1	0	0	1	0	0	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
a0001c0002t0001g0035	0/0	1	1	0	0	0	0	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
a0001c0002t0002g0006	0/0	8	6	2	0	0	0	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
a0001c0002t0002g0039	0/0	1	1	0	0	0	0	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
a0001c0002t0004g0008	0/0	5	4	1	0	0	0	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
a0001c0002t0004g0041	0/0	1	0	1	0	0	0	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
a0001c0002t0008g0008	0/0	1	1	0	0	0	0	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
a0001c0002t0008g0022	0/0	2	1	1	0	0	0	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
a0001c0002t0011g0006	0/0	2	2	0	0	0	0	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
a0001c0002t0013g0008	0/0	1	1	0	0	0	0	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
a0001c0002t0013g0040	0/0	1	1	0	0	0	0	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
a0001c0002t0014g0038	0/0	1	1	0	0	0	0	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
a0002c0003t0001g0001	0/0	5	0	0	5	0	0	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
a0003c0004t0015g0042	0/0	1	1	0	0	0	0	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
a0004c0005t0001g0070	0/0	1	0	0	1	0	0	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
a0005c0006t0001g0049	0/0	1	0	0	1	0	0	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
a0006c0007t0001g0001	0/0	1	0	1	0	0	0	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997

sampleid	ID haplotypeid	ahapid	chapid	thapid	ghapid	gpopname	popname	regionname	genename	chr	start	end
HG00140	hp1	a0001	c0001	t0001	g0001	EUR	GBR	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
HG00280	hp1	a0001	c0001	t0001	g0005	EUR	FIN	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
HG00323	hp1	a0001	c0001	t0001	g0003	EUR	FIN	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
HG00323	hp2	a0001	c0001	t0001	g0032	EUR	FIN	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
HG00408	hp1	a0001	c0001	t0001	g0018	EAS	CHS	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
HG00408	hp2	a0001	c0001	t0001	g0011	EAS	CHS	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
HG00423	hp1	a0002	c0003	t0001	g0001	EAS	CHS	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
HG00423	hp2	a0001	c0001	t0001	g0011	EAS	CHS	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
HG00438	hp1	a0001	c0001	t0001	g0001	EAS	CHS	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
HG00438	hp2	a0001	c0001	t0003	g0007	EAS	CHS	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
HG00544	hp1	a0001	c0001	t0001	g0017	EAS	CHS	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
HG00544	hp2	a0001	c0001	t0001	g0073	EAS	CHS	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
HG00558	hp1	a0001	c0001	t0001	g0014	EAS	CHS	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
HG00558	hp2	a0001	c0001	t0001	g0074	EAS	CHS	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
HG00597	hp1	a0001	c0001	t0001	g0005	EAS	CHS	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
HG00597	hp2	a0001	c0001	t0001	g0005	EAS	CHS	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
HG00609	hp1	a0001	c0001	t0001	g0002	EAS	CHS	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
HG00621	hp1	a0001	c0001	t0001	g0003	EAS	CHS	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
HG00639	hp1	a0001	c0001	t0001	g0001	AMR	PUR	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
HG00639	hp2	a0001	c0001	t0001	g0090	AMR	PUR	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
HG00642	hp1	a0001	c0001	t0001	g0003	AMR	PUR	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
HG00673	hp1	a0001	c0001	t0001	g0003	EAS	CHS	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
HG00733	hp1	a0001	c0001	t0001	g0003	AMR	PUR	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
HG00733	hp2	a0001	c0001	t0001	g0001	AMR	PUR	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
HG00735	hp1	a0001	c0001	t0001	g0001	AMR	PUR	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
HG00735	hp2	a0001	c0001	t0001	g0086	AMR	PUR	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
HG00738	hp1	a0001	c0001	t0001	g0037	AMR	PUR	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
HG00741	hp1	a0001	c0001	t0001	g0061	AMR	PUR	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
HG00741	hp2	a0001	c0001	t0001	g0001	AMR	PUR	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
HG01069	hp1	a0001	c0001	t0001	g0002	AMR	PUR	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
HG01070	hp1	a0001	c0001	t0001	g0060	AMR	PUR	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
HG01070	hp2	a0001	c0001	t0001	g0002	AMR	PUR	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
HG01074	hp1	a0001	c0001	t0001	g0032	AMR	PUR	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
HG01081	hp1	a0001	c0001	t0001	g0003	AMR	PUR	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
HG01081	hp2	a0001	c0002	t0004	g0008	AMR	PUR	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
HG01099	hp1	a0001	c0002	t0008	g0022	AMR	PUR	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
HG01106	hp1	a0001	c0001	t0001	g0012	AMR	PUR	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
HG01109	hp1	a0001	c0001	t0001	g0005	AMR	PUR	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
HG01167	hp1	a0001	c0002	t0002	g0006	AMR	PUR	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
HG01169	hp1	a0001	c0002	t0002	g0006	AMR	PUR	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
HG01169	hp2	a0001	c0001	t0001	g0001	AMR	PUR	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
HG01192	hp1	a0001	c0001	t0001	g0019	AMR	PUR	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
HG01243	hp1	a0001	c0002	t0004	g0041	AMR	PUR	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
HG01255	hp1	a0001	c0001	t0006	g0087	AMR	CLM	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
HG01256	hp1	a0001	c0001	t0001	g0009	AMR	CLM	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
HG01257	hp1	a0001	c0001	t0001	g0009	AMR	CLM	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
HG01257	hp2	a0001	c0001	t0001	g0002	AMR	CLM	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
HG01258	hp1	a0001	c0001	t0001	g0009	AMR	CLM	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
HG01261	hp1	a0001	c0001	t0001	g0003	AMR	CLM	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
HG01358	hp1	a0001	c0001	t0010	g0091	AMR	CLM	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
HG01361	hp1	a0001	c0001	t0001	g0001	AMR	CLM	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
HG01361	hp2	a0001	c0001	t0001	g0012	AMR	CLM	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
HG01433	hp1	a0001	c0001	t0001	g0001	AMR	CLM	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
HG01496	hp1	a0001	c0001	t0001	g0016	AMR	CLM	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
HG01496	hp2	a0001	c0001	t0001	g0019	AMR	CLM	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
HG01515	hp1	a0001	c0001	t0001	g0003	EUR	IBS	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
HG01516	hp1	a0001	c0001	t0001	g0003	EUR	IBS	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
HG01516	hp2	a0001	c0001	t0001	g0012	EUR	IBS	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
HG01884	hp1	a0001	c0001	t0001	g0003	AFR	ACB	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
HG01884	hp2	a0001	c0002	t0001	g0035	AFR	ACB	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
HG01891	hp1	a0001	c0001	t0001	g0002	AFR	ACB	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
HG01891	hp2	a0001	c0002	t0002	g0006	AFR	ACB	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
HG01928	hp1	a0001	c0001	t0001	g0009	AMR	PEL	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
HG01934	hp1	a0001	c0001	t0001	g0064	AMR	PEL	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
HG01943	hp1	a0001	c0001	t0007	g0003	AMR	PEL	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
HG01952	hp1	a0001	c0001	t0010	g0026	AMR	PEL	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
HG01975	hp1	a0001	c0001	t0001	g0002	AMR	PEL	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
HG01975	hp2	a0001	c0001	t0001	g0009	AMR	PEL	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
HG01978	hp1	a0001	c0001	t0001	g0014	AMR	PEL	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
HG01978	hp2	a0001	c0001	t0001	g0016	AMR	PEL	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
HG01993	hp1	a0001	c0001	t0001	g0002	AMR	PEL	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
HG01993	hp2	a0001	c0001	t0001	g0081	AMR	PEL	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
HG02004	hp1	a0001	c0001	t0001	g0002	AMR	PEL	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
HG02004	hp2	a0001	c0001	t0001	g0009	AMR	PEL	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
HG02015	hp1	a0001	c0001	t0001	g0002	EAS	KHV	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
HG02027	hp1	a0001	c0001	t0001	g0017	EAS	KHV	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
HG02040	hp1	a0001	c0001	t0001	g0001	EAS	KHV	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
HG02055	hp1	a0001	c0001	t0009	g0084	AFR	ACB	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
HG02056	hp1	a0001	c0001	t0001	g0023	EAS	KHV	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
HG02071	hp1	a0001	c0001	t0001	g0065	EAS	KHV	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
HG02074	hp1	a0001	c0001	t0001	g0005	EAS	KHV	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
HG02080	hp1	a0001	c0001	t0007	g0005	EAS	KHV	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
HG02080	hp2	a0001	c0001	t0001	g0017	EAS	KHV	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
HG02083	hp1	a0001	c0001	t0001	g0010	EAS	KHV	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
HG02129	hp1	a0001	c0001	t0001	g0003	EAS	KHV	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
HG02132	hp1	a0001	c0001	t0001	g0002	EAS	KHV	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
HG02135	hp1	a0001	c0001	t0001	g0001	EAS	KHV	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
HG02145	hp1	a0001	c0001	t0001	g0004	AFR	ACB	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
HG02148	hp1	a0001	c0001	t0001	g0054	AMR	PEL	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
HG02148	hp2	a0001	c0001	t0001	g0080	AMR	PEL	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
HG02155	hp1	a0001	c0001	t0001	g0002	EAS	CDX	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
HG02155	hp2	a0001	c0001	t0001	g0067	EAS	CDX	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
HG02165	hp1	a0001	c0001	t0001	g0010	EAS	CDX	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
HG02165	hp2	a0001	c0001	t0001	g0002	EAS	CDX	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
HG02257	hp1	a0001	c0001	t0020	g0001	AFR	ACB	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
HG02257	hp2	a0001	c0001	t0001	g0021	AFR	ACB	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
HG02258	hp1	a0001	c0001	t0001	g0004	AFR	ACB	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
HG02273	hp1	a0001	c0001	t0001	g0016	AMR	PEL	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
HG02273	hp2	a0001	c0001	t0001	g0009	AMR	PEL	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
HG02280	hp1	a0001	c0001	t0001	g0077	AFR	ACB	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
HG02280	hp2	a0001	c0002	t0002	g0039	AFR	ACB	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
HG02293	hp1	a0001	c0001	t0001	g0003	AMR	PEL	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
HG02293	hp2	a0001	c0001	t0001	g0066	AMR	PEL	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
HG02451	hp1	a0001	c0002	t0002	g0006	AFR	ACB	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
HG02451	hp2	a0001	c0001	t0001	g0001	AFR	ACB	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
HG02523	hp1	a0001	c0001	t0001	g0003	EAS	KHV	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
HG02523	hp2	a0001	c0001	t0018	g0001	EAS	KHV	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
HG02572	hp1	a0001	c0001	t0019	g0029	AFR	GWD	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
HG02602	hp1	a0001	c0001	t0001	g0012	SAS	PJL	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
HG02615	hp1	a0001	c0001	t0001	g0002	AFR	GWD	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
HG02615	hp2	a0001	c0001	t0007	g0021	AFR	GWD	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
HG02622	hp1	a0001	c0001	t0001	g0001	AFR	GWD	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
HG02622	hp2	a0001	c0002	t0014	g0038	AFR	GWD	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
HG02630	hp1	a0001	c0002	t0002	g0006	AFR	GWD	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
HG02630	hp2	a0001	c0001	t0001	g0034	AFR	GWD	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
HG02647	hp1	a0001	c0001	t0006	g0088	AFR	GWD	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
HG02683	hp1	a0001	c0001	t0001	g0002	SAS	PJL	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
HG02683	hp2	a0001	c0001	t0001	g0092	SAS	PJL	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
HG02698	hp1	a0001	c0001	t0001	g0005	SAS	PJL	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
HG02717	hp1	a0001	c0002	t0002	g0006	AFR	GWD	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
HG02723	hp1	a0001	c0001	t0001	g0001	AFR	GWD	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
HG02723	hp2	a0001	c0001	t0001	g0002	AFR	GWD	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
HG02735	hp1	a0001	c0001	t0001	g0001	SAS	PJL	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
HG02738	hp1	a0001	c0001	t0001	g0001	SAS	PJL	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
HG02809	hp1	a0001	c0001	t0001	g0004	AFR	GWD	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
HG02809	hp2	a0001	c0001	t0001	g0001	AFR	GWD	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
HG02818	hp1	a0001	c0002	t0008	g0022	AFR	GWD	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
HG02818	hp2	a0001	c0001	t0001	g0015	AFR	GWD	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
HG02886	hp1	a0001	c0001	t0001	g0089	AFR	GWD	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
HG02886	hp2	a0001	c0002	t0002	g0006	AFR	GWD	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
HG02895	hp1	a0001	c0001	t0001	g0020	AFR	GWD	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
HG02896	hp1	a0001	c0002	t0011	g0006	AFR	GWD	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
HG02896	hp2	a0003	c0004	t0015	g0042	AFR	GWD	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
HG02897	hp1	a0001	c0001	t0001	g0083	AFR	GWD	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
HG02897	hp2	a0001	c0002	t0011	g0006	AFR	GWD	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
HG02922	hp1	a0001	c0002	t0013	g0008	AFR	ESN	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
HG02922	hp2	a0001	c0001	t0001	g0004	AFR	ESN	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
HG02965	hp1	a0001	c0001	t0001	g0002	AFR	ESN	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
HG02970	hp1	a0001	c0001	t0009	g0031	AFR	ESN	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
HG02970	hp2	a0001	c0001	t0001	g0014	AFR	ESN	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
HG02976	hp1	a0001	c0001	t0001	g0004	AFR	ESN	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
HG02976	hp2	a0001	c0001	t0001	g0003	AFR	ESN	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
HG03017	hp1	a0001	c0001	t0001	g0005	SAS	PJL	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
HG03041	hp1	a0001	c0001	t0001	g0036	AFR	GWD	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
HG03041	hp2	a0001	c0001	t0009	g0031	AFR	GWD	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
HG03098	hp1	a0001	c0001	t0012	g0051	AFR	MSL	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
HG03130	hp1	a0001	c0002	t0008	g0008	AFR	ESN	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
HG03139	hp1	a0001	c0001	t0001	g0078	AFR	ESN	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
HG03195	hp1	a0001	c0001	t0001	g0015	AFR	ESN	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
HG03195	hp2	a0001	c0001	t0001	g0004	AFR	ESN	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
HG03209	hp1	a0001	c0002	t0013	g0040	AFR	MSL	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
HG03225	hp1	a0001	c0001	t0001	g0002	AFR	MSL	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
HG03453	hp1	a0001	c0001	t0001	g0015	AFR	MSL	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
HG03453	hp2	a0001	c0001	t0001	g0004	AFR	MSL	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
HG03486	hp1	a0001	c0001	t0006	g0033	AFR	MSL	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
HG03486	hp2	a0001	c0001	t0017	g0045	AFR	MSL	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
HG03490	hp1	a0001	c0001	t0001	g0001	SAS	PJL	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
HG03491	hp1	a0001	c0001	t0001	g0002	SAS	PJL	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
HG03491	hp2	a0001	c0001	t0001	g0001	SAS	PJL	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
HG03492	hp1	a0001	c0001	t0001	g0002	SAS	PJL	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
HG03516	hp1	a0001	c0002	t0004	g0008	AFR	ESN	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
HG03516	hp2	a0001	c0001	t0001	g0001	AFR	ESN	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
HG03540	hp1	a0001	c0002	t0002	g0006	AFR	GWD	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
HG03540	hp2	a0001	c0001	t0001	g0001	AFR	GWD	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
HG03579	hp1	a0001	c0001	t0001	g0003	AFR	MSL	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
HG03654	hp1	a0001	c0001	t0001	g0001	SAS	PJL	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
HG03669	hp1	a0001	c0001	t0001	g0058	SAS	PJL	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
HG03669	hp2	a0001	c0001	t0001	g0002	SAS	PJL	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
HG03688	hp1	a0001	c0001	t0001	g0050	SAS	STU	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
HG03710	hp1	a0001	c0001	t0001	g0002	SAS	PJL	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
HG03834	hp1	a0001	c0001	t0001	g0002	SAS	BEB	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
HG03834	hp2	a0001	c0001	t0005	g0001	SAS	BEB	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
HG03927	hp1	a0001	c0001	t0001	g0020	SAS	BEB	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
HG03927	hp2	a0001	c0001	t0001	g0053	SAS	BEB	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
HG03942	hp1	a0001	c0001	t0001	g0002	SAS	BEB	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
HG04115	hp1	a0001	c0001	t0016	g0019	SAS	STU	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
HG04184	hp1	a0001	c0001	t0001	g0085	SAS	BEB	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
HG04184	hp2	a0001	c0001	t0001	g0082	SAS	BEB	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
HG04199	hp1	a0001	c0001	t0001	g0001	SAS	STU	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
HG04204	hp1	a0001	c0001	t0001	g0014	SAS	STU	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
HG04228	hp1	a0001	c0001	t0001	g0011	SAS	STU	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
NA18522	hp1	a0001	c0001	t0001	g0004	AFR	YRI	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
NA18612	hp1	a0001	c0001	t0001	g0001	EAS	CHB	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
NA18747	hp1	a0001	c0001	t0001	g0003	EAS	CHB	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
NA18906	hp1	a0001	c0001	t0007	g0002	AFR	YRI	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
NA18906	hp2	a0001	c0001	t0001	g0005	AFR	YRI	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
NA18939	hp1	a0001	c0001	t0001	g0002	EAS	JPT	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
NA18939	hp2	a0001	c0001	t0001	g0001	EAS	JPT	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
NA18940	hp1	a0001	c0001	t0001	g0020	EAS	JPT	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
NA18941	hp1	a0001	c0001	t0001	g0003	EAS	JPT	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
NA18941	hp2	a0002	c0003	t0001	g0001	EAS	JPT	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
NA18944	hp1	a0001	c0001	t0001	g0030	EAS	JPT	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
NA18945	hp1	a0001	c0001	t0001	g0003	EAS	JPT	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
NA18946	hp1	a0001	c0001	t0001	g0003	EAS	JPT	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
NA18946	hp2	a0001	c0001	t0001	g0010	EAS	JPT	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
NA18947	hp1	a0001	c0001	t0001	g0071	EAS	JPT	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
NA18947	hp2	a0001	c0001	t0001	g0018	EAS	JPT	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
NA18948	hp1	a0001	c0001	t0001	g0059	EAS	JPT	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
NA18951	hp1	a0001	c0001	t0001	g0001	EAS	JPT	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
NA18951	hp2	a0001	c0001	t0001	g0002	EAS	JPT	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
NA18952	hp1	a0001	c0001	t0001	g0001	EAS	JPT	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
NA18953	hp1	a0001	c0001	t0003	g0007	EAS	JPT	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
NA18956	hp1	a0001	c0001	t0001	g0026	EAS	JPT	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
NA18956	hp2	a0001	c0001	t0001	g0072	EAS	JPT	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
NA18957	hp1	a0001	c0001	t0001	g0001	EAS	JPT	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
NA18957	hp2	a0001	c0001	t0003	g0076	EAS	JPT	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
NA18959	hp1	a0001	c0001	t0001	g0001	EAS	JPT	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
NA18960	hp1	a0001	c0001	t0001	g0043	EAS	JPT	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
NA18961	hp1	a0001	c0001	t0001	g0005	EAS	JPT	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
NA18962	hp1	a0001	c0001	t0001	g0046	EAS	JPT	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
NA18963	hp1	a0001	c0001	t0001	g0028	EAS	JPT	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
NA18963	hp2	a0001	c0001	t0001	g0001	EAS	JPT	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
NA18964	hp1	a0001	c0001	t0001	g0001	EAS	JPT	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
NA18964	hp2	a0001	c0001	t0001	g0003	EAS	JPT	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
NA18965	hp1	a0001	c0001	t0001	g0010	EAS	JPT	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
NA18966	hp1	a0001	c0001	t0001	g0057	EAS	JPT	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
NA18967	hp1	a0001	c0001	t0001	g0007	EAS	JPT	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
NA18968	hp1	a0001	c0001	t0001	g0016	EAS	JPT	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
NA18968	hp2	a0001	c0001	t0001	g0023	EAS	JPT	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
NA18969	hp1	a0001	c0001	t0001	g0002	EAS	JPT	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
NA18969	hp2	a0001	c0001	t0001	g0029	EAS	JPT	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
NA18970	hp1	a0001	c0001	t0001	g0001	EAS	JPT	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
NA18971	hp1	a0001	c0001	t0001	g0013	EAS	JPT	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
NA18972	hp1	a0001	c0001	t0005	g0005	EAS	JPT	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
NA18972	hp2	a0001	c0001	t0001	g0005	EAS	JPT	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
NA18973	hp1	a0001	c0001	t0001	g0002	EAS	JPT	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
NA18973	hp2	a0002	c0003	t0001	g0001	EAS	JPT	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
NA18977	hp1	a0001	c0001	t0001	g0024	EAS	JPT	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
NA18979	hp1	a0001	c0001	t0001	g0001	EAS	JPT	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
NA18979	hp2	a0001	c0001	t0001	g0052	EAS	JPT	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
NA18982	hp1	a0001	c0001	t0001	g0001	EAS	JPT	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
NA18983	hp1	a0001	c0001	t0001	g0013	EAS	JPT	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
NA18984	hp1	a0001	c0001	t0001	g0001	EAS	JPT	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
NA18985	hp1	a0001	c0001	t0001	g0079	EAS	JPT	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
NA18986	hp1	a0001	c0001	t0001	g0002	EAS	JPT	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
NA18988	hp1	a0001	c0001	t0001	g0063	EAS	JPT	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
NA18989	hp1	a0001	c0001	t0001	g0048	EAS	JPT	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
NA18990	hp1	a0001	c0001	t0001	g0003	EAS	JPT	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
NA18994	hp1	a0001	c0001	t0001	g0011	EAS	JPT	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
NA18995	hp1	a0001	c0001	t0001	g0028	EAS	JPT	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
NA18998	hp1	a0001	c0001	t0003	g0007	EAS	JPT	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
NA18998	hp2	a0001	c0001	t0001	g0011	EAS	JPT	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
NA18999	hp1	a0002	c0003	t0001	g0001	EAS	JPT	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
NA18999	hp2	a0001	c0001	t0001	g0001	EAS	JPT	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
NA19000	hp1	a0001	c0001	t0003	g0007	EAS	JPT	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
NA19001	hp1	a0001	c0001	t0001	g0005	EAS	JPT	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
NA19001	hp2	a0001	c0001	t0001	g0062	EAS	JPT	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
NA19002	hp1	a0001	c0001	t0001	g0001	EAS	JPT	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
NA19002	hp2	a0001	c0001	t0003	g0007	EAS	JPT	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
NA19004	hp1	a0001	c0001	t0001	g0002	EAS	JPT	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
NA19005	hp1	a0001	c0001	t0001	g0010	EAS	JPT	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
NA19006	hp1	a0005	c0006	t0001	g0049	EAS	JPT	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
NA19007	hp1	a0001	c0001	t0001	g0013	EAS	JPT	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
NA19009	hp1	a0001	c0001	t0003	g0007	EAS	JPT	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
NA19010	hp1	a0001	c0001	t0001	g0001	EAS	JPT	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
NA19010	hp2	a0001	c0001	t0003	g0007	EAS	JPT	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
NA19012	hp1	a0001	c0001	t0005	g0011	EAS	JPT	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
NA19030	hp1	a0001	c0002	t0004	g0008	AFR	LWK	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
NA19030	hp2	a0001	c0001	t0006	g0044	AFR	LWK	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
NA19043	hp1	a0001	c0001	t0001	g0055	AFR	LWK	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
NA19055	hp1	a0001	c0001	t0005	g0001	EAS	JPT	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
NA19056	hp1	a0001	c0001	t0001	g0013	EAS	JPT	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
NA19057	hp1	a0001	c0001	t0001	g0001	EAS	JPT	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
NA19057	hp2	a0001	c0001	t0001	g0002	EAS	JPT	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
NA19058	hp1	a0001	c0001	t0001	g0001	EAS	JPT	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
NA19060	hp1	a0001	c0001	t0001	g0003	EAS	JPT	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
NA19062	hp1	a0001	c0001	t0001	g0013	EAS	JPT	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
NA19063	hp1	a0001	c0001	t0001	g0030	EAS	JPT	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
NA19065	hp1	a0001	c0001	t0001	g0001	EAS	JPT	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
NA19065	hp2	a0001	c0001	t0001	g0003	EAS	JPT	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
NA19066	hp1	a0001	c0001	t0001	g0017	EAS	JPT	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
NA19067	hp1	a0001	c0001	t0010	g0018	EAS	JPT	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
NA19068	hp1	a0001	c0001	t0001	g0001	EAS	JPT	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
NA19070	hp1	a0001	c0001	t0001	g0003	EAS	JPT	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
NA19072	hp1	a0001	c0001	t0005	g0025	EAS	JPT	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
NA19076	hp1	a0001	c0001	t0021	g0069	EAS	JPT	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
NA19079	hp1	a0001	c0001	t0001	g0010	EAS	JPT	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
NA19080	hp1	a0001	c0001	t0005	g0001	EAS	JPT	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
NA19080	hp2	a0001	c0001	t0001	g0001	EAS	JPT	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
NA19082	hp1	a0001	c0001	t0001	g0014	EAS	JPT	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
NA19083	hp1	a0001	c0001	t0001	g0075	EAS	JPT	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
NA19084	hp1	a0001	c0001	t0001	g0002	EAS	JPT	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
NA19084	hp2	a0001	c0001	t0001	g0025	EAS	JPT	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
NA19085	hp1	a0001	c0001	t0001	g0002	EAS	JPT	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
NA19086	hp1	a0002	c0003	t0001	g0001	EAS	JPT	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
NA19088	hp1	a0001	c0001	t0001	g0056	EAS	JPT	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
NA19089	hp1	a0004	c0005	t0001	g0070	EAS	JPT	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
NA19090	hp1	a0001	c0001	t0001	g0018	EAS	JPT	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
NA19090	hp2	a0001	c0001	t0001	g0001	EAS	JPT	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
NA19091	hp1	a0001	c0001	t0001	g0068	EAS	JPT	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
NA19240	hp1	a0001	c0001	t0001	g0004	AFR	YRI	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
NA19240	hp2	a0001	c0001	t0001	g0002	AFR	YRI	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
NA20129	hp1	a0001	c0001	t0006	g0033	AFR	ASW	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
NA20129	hp2	a0001	c0001	t0001	g0004	AFR	ASW	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
NA20752	hp1	a0001	c0001	t0001	g0027	EUR	TSI	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
NA20805	hp1	a0001	c0001	t0001	g0002	EUR	TSI	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
NA20905	hp1	a0001	c0001	t0001	g0012	SAS	GIH	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
HG01123	hp1	a0001	c0001	t0001	g0027	AMR	CLM	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
HG01123	hp2	a0006	c0007	t0001	g0001	AMR	CLM	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
HG02486	hp1	a0001	c0001	t0001	g0004	AFR	ACB	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
HG02559	hp1	a0001	c0001	t0001	g0004	AFR	ACB	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
HG02559	hp2	a0001	c0001	t0012	g0004	AFR	ACB	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
HG03471	hp1	a0001	c0001	t0001	g0015	AFR	MSL	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
HG06807	hp1	a0001	c0002	t0004	g0008	AFR	USA	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
HG06807	hp2	a0001	c0001	t0001	g0001	AFR	USA	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
NA18955	hp1	a0001	c0001	t0001	g0024	EAS	JPT	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
NA20300	hp1	a0001	c0001	t0001	g0002	AFR	USA	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
NA20300	hp2	a0001	c0002	t0004	g0008	AFR	USA	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
NA21309	hp1	a0001	c0001	t0001	g0001	AFR	LWK	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
NA21309	hp2	a0001	c0001	t0001	g0047	AFR	LWK	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
homoSapiens_chm13v2	hp1	a0001	c0001	t0001	g0001	REF	REF	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997
homoSapiens_grch38	hp1	a0001	c0001	t0001	g0002	REF	REF	CDK16_chrX_47213681_47234997	CDK16	chrX	47213681	47234997

chr:pos	ref	alt	# # of ahapid:amino-acid(protein) level	ahapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	hgvs_p	genename	geneid	featuretype	featureid	transcript_biotype	rank	cdna cdna pos length	cds cds pos length	aa aa pos length	status	chr	pos
chrX:47226016	C C	T T	1	a0002 a0002	5	HG00423.hp1 NA18941.hp2 NA18973.hp2 others(2): Show HG00423.hp1 NA18941.hp2 NA18973.hp2 NA18999.hp1 NA19086.hp1	missense_variant	MODERATE	c.781C>T c.781C>T	p.His261Tyr p.His261Tyr	CDK16	ENSG00000102225.17	transcript	ENST00000357227.9	protein_coding	8/16	1212/3151	781/1491	261/496		chrX	47226016
chrX:47226375	AG AG	A A	1	a0003 a0003	1	HG02896.hp2 HG02896.hp2	frameshift_variant	HIGH	c.893delG c.893delG	p.Gly298fs p.Gly298fs	CDK16	ENSG00000102225.17	transcript	ENST00000357227.9	protein_coding	9/16	1324/3151	893/1491	298/496	INFO_REALIGN_3_PRIME	chrX	47226375
chrX:47226649	G G	C C	1	a0004 a0004	1	NA19089.hp1 NA19089.hp1	missense_variant	MODERATE	c.983G>C c.983G>C	p.Arg328Pro p.Arg328Pro	CDK16	ENSG00000102225.17	transcript	ENST00000357227.9	protein_coding	10/16	1414/3151	983/1491	328/496		chrX	47226649
chrX:47226650	G G	GC GC	1	a0005 a0005	1	NA19006.hp1 NA19006.hp1	frameshift_variant	HIGH	c.989dupC c.989dupC	p.Asp331fs p.Asp331fs	CDK16	ENSG00000102225.17	transcript	ENST00000357227.9	protein_coding	10/16	1421/3151	990/1491	330/496	INFO_REALIGN_3_PRIME	chrX	47226650
chrX:47226651	C C	G G	1	a0004 a0004	1	NA19089.hp1 NA19089.hp1	missense_variant	MODERATE	c.985C>G c.985C>G	p.Pro329Ala p.Pro329Ala	CDK16	ENSG00000102225.17	transcript	ENST00000357227.9	protein_coding	10/16	1416/3151	985/1491	329/496		chrX	47226651
chrX:47226996	AC AC	A A	1	a0004 a0004	1	NA19089.hp1 NA19089.hp1	frameshift_variant	HIGH	c.1142delC c.1142delC	p.Pro381fs p.Pro381fs	CDK16	ENSG00000102225.17	transcript	ENST00000357227.9	protein_coding	12/16	1573/3151	1142/1491	381/496	INFO_REALIGN_3_PRIME	chrX	47226996
chrX:47227389	GA GA	G G	1	a0004 a0004	1	NA19089.hp1 NA19089.hp1	frameshift_variant	HIGH	c.1298delA c.1298delA	p.Asn433fs p.Asn433fs	CDK16	ENSG00000102225.17	transcript	ENST00000357227.9	protein_coding	14/16	1729/3151	1298/1491	433/496	INFO_REALIGN_3_PRIME	chrX	47227389
chrX:47227417	GA GA	G G	1	a0004 a0004	1	NA19089.hp1 NA19089.hp1	frameshift_variant	HIGH	c.1326delA c.1326delA	p.Lys442fs p.Lys442fs	CDK16	ENSG00000102225.17	transcript	ENST00000357227.9	protein_coding	14/16	1757/3151	1326/1491	442/496	INFO_REALIGN_3_PRIME	chrX	47227417
chrX:47227462	TC TC	T T	1	a0004 a0004	1	NA19089.hp1 NA19089.hp1	frameshift_variant	HIGH	c.1370delC c.1370delC	p.Pro457fs p.Pro457fs	CDK16	ENSG00000102225.17	transcript	ENST00000357227.9	protein_coding	14/16	1801/3151	1370/1491	457/496	INFO_REALIGN_3_PRIME	chrX	47227462
chrX:47228617	C C	A A	1	a0006 a0006	1	HG01123.hp2 HG01123.hp2	missense_variant	MODERATE	c.1426C>A c.1426C>A	p.Leu476Ile p.Leu476Ile	CDK16	ENSG00000102225.17	transcript	ENST00000357227.9	protein_coding	15/16	1857/3151	1426/1491	476/496		chrX	47228617

chr:pos	ref	alt	# # of chapid	chapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	hgvs_p	genename	geneid	featuretype	featureid	transcript_biotype	rank	cdna cdna pos length	cds cds pos length	aa aa pos length	distance	status	chr	pos
chrX:47224638	A A	G G	1	a0001c0002 a0001c0002	24	HG01081.hp2 HG01099.hp1 HG01167.hp1 others(21): Show HG01081.hp2 HG01099.hp1 HG01167.hp1 HG01169.hp1 HG01243.hp1 HG01884.hp2 HG01891.hp2 HG02280.hp2 HG02451.hp1 HG02622.hp2 HG02630.hp1 HG02717.hp1 HG02818.hp1 HG02886.hp2 HG02896.hp1 HG02897.hp2 HG02922.hp1 HG03130.hp1 HG03209.hp1 HG03516.hp1 HG03540.hp1 HG06807.hp1 NA19030.hp1 NA20300.hp2	synonymous_variant	LOW	c.357A>G c.357A>G	p.Ser119Ser p.Ser119Ser	CDK16	ENSG00000102225.17	transcript	ENST00000357227.9	protein_coding	4/16	788/3151	357/1491	119/496			chrX	47224638

chr:pos	ref	alt	# # of thapid:transcript level	thapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	pos
chrX:47218724	C C	A A	1	a0001c0002t0014 a0001c0002t0014	1	HG02622.hp2 HG02622.hp2	5_prime_UTR_variant	MODIFIER	c.-388C>A c.-388C>A	CDK16	ENSG00000102225.17	transcript	ENST00000357227.9	protein_coding	1/16	4834		chrX	47218724
chrX:47218853	C C	T T	1	a0001c0001t0003 a0001c0001t0003	8	HG00438.hp2 NA18953.hp1 NA18957.hp2 others(5): Show HG00438.hp2 NA18953.hp1 NA18957.hp2 NA18998.hp1 NA19000.hp1 NA19002.hp2 NA19009.hp1 NA19010.hp2	5_prime_UTR_variant	MODIFIER	c.-259C>T c.-259C>T	CDK16	ENSG00000102225.17	transcript	ENST00000357227.9	protein_coding	1/16	4705		chrX	47218853
chrX:47219020	A A	T T	1	a0001c0001t0006 a0001c0001t0006	5	HG01255.hp1 HG02647.hp1 HG03486.hp1 others(2): Show HG01255.hp1 HG02647.hp1 HG03486.hp1 NA19030.hp2 NA20129.hp1	5_prime_UTR_variant	MODIFIER	c.-92A>T c.-92A>T	CDK16	ENSG00000102225.17	transcript	ENST00000357227.9	protein_coding	1/16	4538		chrX	47219020
chrX:47219039	CG CG	C C	1	a0003c0004t0015 a0003c0004t0015	1	HG02896.hp2 HG02896.hp2	5_prime_UTR_variant	MODIFIER	c.-70delG c.-70delG	CDK16	ENSG00000102225.17	transcript	ENST00000357227.9	protein_coding	1/16	4516	INFO_REALIGN_3_PRIME	chrX	47219039
chrX:47228803	A A	G G	1	a0001c0002t0013 a0001c0002t0013	2	HG02922.hp1 HG03209.hp1 HG02922.hp1 HG03209.hp1	3_prime_UTR_variant	MODIFIER	c.35A>G c.35A>G	CDK16	ENSG00000102225.17	transcript	ENST00000357227.9	protein_coding	16/16	35		chrX	47228803
chrX:47228879	TG TG	T T	1	a0001c0001t0021 a0001c0001t0021	1	NA19076.hp1 NA19076.hp1	3_prime_UTR_variant	MODIFIER	c.112delG c.112delG	CDK16	ENSG00000102225.17	transcript	ENST00000357227.9	protein_coding	16/16	112		chrX	47228879
chrX:47228935	T T	C C	1	a0001c0001t0016 a0001c0001t0016	1	HG04115.hp1 HG04115.hp1	3_prime_UTR_variant	MODIFIER	c.167T>C c.167T>C	CDK16	ENSG00000102225.17	transcript	ENST00000357227.9	protein_coding	16/16	167		chrX	47228935
chrX:47229041	G G	A A	2	a0001c0002t0002 a0001c0002t0011 a0001c0002t0002 a0001c0002t0011	11	HG01167.hp1 HG01169.hp1 HG01891.hp2 others(8): Show HG01167.hp1 HG01169.hp1 HG01891.hp2 HG02280.hp2 HG02451.hp1 HG02630.hp1 HG02717.hp1 HG02886.hp2 HG02896.hp1 HG02897.hp2 HG03540.hp1	3_prime_UTR_variant	MODIFIER	c.273G>A c.273G>A	CDK16	ENSG00000102225.17	transcript	ENST00000357227.9	protein_coding	16/16	273		chrX	47229041
chrX:47229077	C C	A A	2	a0001c0002t0008 a0001c0002t0013 a0001c0002t0008 a0001c0002t0013	5	HG01099.hp1 HG02818.hp1 HG02922.hp1 others(2): Show HG01099.hp1 HG02818.hp1 HG02922.hp1 HG03130.hp1 HG03209.hp1	3_prime_UTR_variant	MODIFIER	c.309C>A c.309C>A	CDK16	ENSG00000102225.17	transcript	ENST00000357227.9	protein_coding	16/16	309		chrX	47229077
chrX:47229087	G G	GC GC	1	a0001c0001t0021 a0001c0001t0021	1	NA19076.hp1 NA19076.hp1	3_prime_UTR_variant	MODIFIER	c.324dupC c.324dupC	CDK16	ENSG00000102225.17	transcript	ENST00000357227.9	protein_coding	16/16	325	INFO_REALIGN_3_PRIME	chrX	47229087
chrX:47229173	G G	A A	1	a0001c0001t0017 a0001c0001t0017	1	HG03486.hp2 HG03486.hp2	3_prime_UTR_variant	MODIFIER	c.405G>A c.405G>A	CDK16	ENSG00000102225.17	transcript	ENST00000357227.9	protein_coding	16/16	405		chrX	47229173
chrX:47229254	T T	G G	1	a0001c0002t0004 a0001c0002t0004	6	HG01081.hp2 HG01243.hp1 HG03516.hp1 others(3): Show HG01081.hp2 HG01243.hp1 HG03516.hp1 HG06807.hp1 NA19030.hp1 NA20300.hp2	3_prime_UTR_variant	MODIFIER	c.486T>G c.486T>G	CDK16	ENSG00000102225.17	transcript	ENST00000357227.9	protein_coding	16/16	486		chrX	47229254
chrX:47229263	G G	GT GT	1	a0001c0001t0010 a0001c0001t0010	3	HG01358.hp1 HG01952.hp1 NA19067.hp1 HG01358.hp1 HG01952.hp1 NA19067.hp1	3_prime_UTR_variant	MODIFIER	c.508dupT c.508dupT	CDK16	ENSG00000102225.17	transcript	ENST00000357227.9	protein_coding	16/16	509	INFO_REALIGN_3_PRIME	chrX	47229263
chrX:47229263	GT GT	G G	3	a0001c0001t0005 a0001c0001t0007 a0001c0001t0018 a0001c0001t0005 a0001c0001t0007 a0001c0001t0018	11	HG01943.hp1 HG02080.hp1 HG02523.hp2 others(8): Show HG01943.hp1 HG02080.hp1 HG02523.hp2 HG02615.hp2 HG03834.hp2 NA18906.hp1 NA18972.hp1 NA19012.hp1 NA19055.hp1 NA19072.hp1 NA19080.hp1	3_prime_UTR_variant	MODIFIER	c.508delT c.508delT	CDK16	ENSG00000102225.17	transcript	ENST00000357227.9	protein_coding	16/16	508	INFO_REALIGN_3_PRIME	chrX	47229263
chrX:47229486	C C	G G	1	a0001c0001t0020 a0001c0001t0020	1	HG02257.hp1 HG02257.hp1	3_prime_UTR_variant	MODIFIER	c.718C>G c.718C>G	CDK16	ENSG00000102225.17	transcript	ENST00000357227.9	protein_coding	16/16	718		chrX	47229486
chrX:47229504	C C	T T	2	a0001c0001t0005 a0001c0001t0018 a0001c0001t0005 a0001c0001t0018	7	HG02523.hp2 HG03834.hp2 NA18972.hp1 others(4): Show HG02523.hp2 HG03834.hp2 NA18972.hp1 NA19012.hp1 NA19055.hp1 NA19072.hp1 NA19080.hp1	3_prime_UTR_variant	MODIFIER	c.736C>T c.736C>T	CDK16	ENSG00000102225.17	transcript	ENST00000357227.9	protein_coding	16/16	736		chrX	47229504
chrX:47229616	T T	TTCC TTCC	1	a0001c0001t0021 a0001c0001t0021	1	NA19076.hp1 NA19076.hp1	3_prime_UTR_variant	MODIFIER	c.850_852dupCCT c.850_852dupCCT	CDK16	ENSG00000102225.17	transcript	ENST00000357227.9	protein_coding	16/16	853	INFO_REALIGN_3_PRIME	chrX	47229616
chrX:47229690	AG AG	A A	1	a0001c0001t0021 a0001c0001t0021	1	NA19076.hp1 NA19076.hp1	3_prime_UTR_variant	MODIFIER	c.924delG c.924delG	CDK16	ENSG00000102225.17	transcript	ENST00000357227.9	protein_coding	16/16	924	INFO_REALIGN_3_PRIME	chrX	47229690
chrX:47229729	T T	A A	1	a0001c0001t0009 a0001c0001t0009	3	HG02055.hp1 HG02970.hp1 HG03041.hp2 HG02055.hp1 HG02970.hp1 HG03041.hp2	3_prime_UTR_variant	MODIFIER	c.961T>A c.961T>A	CDK16	ENSG00000102225.17	transcript	ENST00000357227.9	protein_coding	16/16	961		chrX	47229729
chrX:47229751	A A	AG AG	1	a0001c0001t0018 a0001c0001t0018	1	HG02523.hp2 HG02523.hp2	3_prime_UTR_variant	MODIFIER	c.989dupG c.989dupG	CDK16	ENSG00000102225.17	transcript	ENST00000357227.9	protein_coding	16/16	990	INFO_REALIGN_3_PRIME	chrX	47229751
chrX:47229793	C C	T T	1	a0001c0002t0011 a0001c0002t0011	2	HG02896.hp1 HG02897.hp2 HG02896.hp1 HG02897.hp2	3_prime_UTR_variant	MODIFIER	c.1025C>T c.1025C>T	CDK16	ENSG00000102225.17	transcript	ENST00000357227.9	protein_coding	16/16	1025		chrX	47229793
chrX:47229836	T T	A A	1	a0001c0001t0012 a0001c0001t0012	2	HG02559.hp2 HG03098.hp1 HG02559.hp2 HG03098.hp1	3_prime_UTR_variant	MODIFIER	c.1068T>A c.1068T>A	CDK16	ENSG00000102225.17	transcript	ENST00000357227.9	protein_coding	16/16	1068		chrX	47229836
chrX:47229963	C C	T T	1	a0001c0001t0019 a0001c0001t0019	1	HG02572.hp1 HG02572.hp1	3_prime_UTR_variant	MODIFIER	c.1195C>T c.1195C>T	CDK16	ENSG00000102225.17	transcript	ENST00000357227.9	protein_coding	16/16	1195		chrX	47229963

chr:pos	ref	alt	# # of ghapid:genebody level	ghapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	genename	geneid	featuretype	featureid	genebody_biotype	rank	status	chr	pos
chrX:47219146	T T	C C	16	a0001c0001t0001g0021 a0001c0001t0001g0034 a0001c0001t0001g0036 others(13): Show a0001c0001t0001g0021 a0001c0001t0001g0034 a0001c0001t0001g0036 a0001c0001t0001g0037 a0001c0001t0007g0021 a0001c0002t0001g0035 a0001c0002t0002g0006 a0001c0002t0002g0039 a0001c0002t0004g0008 a0001c0002t0004g0041 a0001c0002t0008g0008 a0001c0002t0008g0022 a0001c0002t0011g0006 a0001c0002t0013g0008 a0001c0002t0013g0040 a0001c0002t0014g0038	29	HG00738.hp1 HG01081.hp2 HG01099.hp1 others(26): Show HG00738.hp1 HG01081.hp2 HG01099.hp1 HG01167.hp1 HG01169.hp1 HG01243.hp1 HG01884.hp2 HG01891.hp2 HG02257.hp2 HG02280.hp2 HG02451.hp1 HG02615.hp2 HG02622.hp2 HG02630.hp1 HG02630.hp2 HG02717.hp1 HG02818.hp1 HG02886.hp2 HG02896.hp1 HG02897.hp2 HG02922.hp1 HG03041.hp1 HG03130.hp1 HG03209.hp1 HG03516.hp1 HG03540.hp1 HG06807.hp1 NA19030.hp1 NA20300.hp2	intron_variant	MODIFIER	c.-7+41T>C c.-7+41T>C	CDK16	ENSG00000102225.17	transcript	ENST00000357227.9	protein_coding	1/15		chrX	47219146
chrX:47219149	G G	GA GA	1	a0003c0004t0015g0042 a0003c0004t0015g0042	1	HG02896.hp2 HG02896.hp2	intron_variant	MODIFIER	c.-7+46dupA c.-7+46dupA	CDK16	ENSG00000102225.17	transcript	ENST00000357227.9	protein_coding	1/15	INFO_REALIGN_3_PRIME	chrX	47219149
chrX:47219171	A A	AG AG	1	a0001c0001t0001g0043 a0001c0001t0001g0043	1	NA18960.hp1 NA18960.hp1	intron_variant	MODIFIER	c.-7+70dupG c.-7+70dupG	CDK16	ENSG00000102225.17	transcript	ENST00000357227.9	protein_coding	1/15	INFO_REALIGN_3_PRIME	chrX	47219171
chrX:47219178	T T	TG TG	1	a0003c0004t0015g0042 a0003c0004t0015g0042	1	HG02896.hp2 HG02896.hp2	intron_variant	MODIFIER	c.-7+76dupG c.-7+76dupG	CDK16	ENSG00000102225.17	transcript	ENST00000357227.9	protein_coding	1/15	INFO_REALIGN_3_PRIME	chrX	47219178
chrX:47219185	CG CG	C C	1	a0003c0004t0015g0042 a0003c0004t0015g0042	1	HG02896.hp2 HG02896.hp2	intron_variant	MODIFIER	c.-7+84delG c.-7+84delG	CDK16	ENSG00000102225.17	transcript	ENST00000357227.9	protein_coding	1/15	INFO_REALIGN_3_PRIME	chrX	47219185
chrX:47219226	A A	G G	9	a0001c0002t0002g0006 a0001c0002t0002g0039 a0001c0002t0004g0008 others(6): Show a0001c0002t0002g0006 a0001c0002t0002g0039 a0001c0002t0004g0008 a0001c0002t0004g0041 a0001c0002t0008g0008 a0001c0002t0008g0022 a0001c0002t0011g0006 a0001c0002t0013g0008 a0001c0002t0013g0040	22	HG01081.hp2 HG01099.hp1 HG01167.hp1 others(19): Show HG01081.hp2 HG01099.hp1 HG01167.hp1 HG01169.hp1 HG01243.hp1 HG01891.hp2 HG02280.hp2 HG02451.hp1 HG02630.hp1 HG02717.hp1 HG02818.hp1 HG02886.hp2 HG02896.hp1 HG02897.hp2 HG02922.hp1 HG03130.hp1 HG03209.hp1 HG03516.hp1 HG03540.hp1 HG06807.hp1 NA19030.hp1 NA20300.hp2	intron_variant	MODIFIER	c.-7+121A>G c.-7+121A>G	CDK16	ENSG00000102225.17	transcript	ENST00000357227.9	protein_coding	1/15		chrX	47219226
chrX:47219241	G G	T T	1	a0001c0001t0001g0092 a0001c0001t0001g0092	1	HG02683.hp2 HG02683.hp2	intron_variant	MODIFIER	c.-7+136G>T c.-7+136G>T	CDK16	ENSG00000102225.17	transcript	ENST00000357227.9	protein_coding	1/15		chrX	47219241
chrX:47219387	T T	TG TG	1	a0001c0001t0006g0044 a0001c0001t0006g0044	1	NA19030.hp2 NA19030.hp2	intron_variant	MODIFIER	c.-7+289dupG c.-7+289dupG	CDK16	ENSG00000102225.17	transcript	ENST00000357227.9	protein_coding	1/15	INFO_REALIGN_3_PRIME	chrX	47219387
chrX:47219401	A A	T T	1	a0001c0001t0010g0091 a0001c0001t0010g0091	1	HG01358.hp1 HG01358.hp1	intron_variant	MODIFIER	c.-7+296A>T c.-7+296A>T	CDK16	ENSG00000102225.17	transcript	ENST00000357227.9	protein_coding	1/15		chrX	47219401
chrX:47219423	G G	C C	16	a0001c0001t0001g0021 a0001c0001t0001g0034 a0001c0001t0001g0036 others(13): Show a0001c0001t0001g0021 a0001c0001t0001g0034 a0001c0001t0001g0036 a0001c0001t0001g0037 a0001c0001t0007g0021 a0001c0002t0001g0035 a0001c0002t0002g0006 a0001c0002t0002g0039 a0001c0002t0004g0008 a0001c0002t0004g0041 a0001c0002t0008g0008 a0001c0002t0008g0022 a0001c0002t0011g0006 a0001c0002t0013g0008 a0001c0002t0013g0040 a0001c0002t0014g0038	29	HG00738.hp1 HG01081.hp2 HG01099.hp1 others(26): Show HG00738.hp1 HG01081.hp2 HG01099.hp1 HG01167.hp1 HG01169.hp1 HG01243.hp1 HG01884.hp2 HG01891.hp2 HG02257.hp2 HG02280.hp2 HG02451.hp1 HG02615.hp2 HG02622.hp2 HG02630.hp1 HG02630.hp2 HG02717.hp1 HG02818.hp1 HG02886.hp2 HG02896.hp1 HG02897.hp2 HG02922.hp1 HG03041.hp1 HG03130.hp1 HG03209.hp1 HG03516.hp1 HG03540.hp1 HG06807.hp1 NA19030.hp1 NA20300.hp2	intron_variant	MODIFIER	c.-7+318G>C c.-7+318G>C	CDK16	ENSG00000102225.17	transcript	ENST00000357227.9	protein_coding	1/15		chrX	47219423
chrX:47219427	G G	GC GC	1	a0003c0004t0015g0042 a0003c0004t0015g0042	1	HG02896.hp2 HG02896.hp2	intron_variant	MODIFIER	c.-7+324dupC c.-7+324dupC	CDK16	ENSG00000102225.17	transcript	ENST00000357227.9	protein_coding	1/15	INFO_REALIGN_3_PRIME	chrX	47219427
chrX:47219476	G G	T T	1	a0001c0001t0001g0090 a0001c0001t0001g0090	1	HG00639.hp2 HG00639.hp2	intron_variant	MODIFIER	c.-7+371G>T c.-7+371G>T	CDK16	ENSG00000102225.17	transcript	ENST00000357227.9	protein_coding	1/15		chrX	47219476
chrX:47220163	A A	G G	1	a0001c0001t0001g0089 a0001c0001t0001g0089	1	HG02886.hp1 HG02886.hp1	intron_variant	MODIFIER	c.-7+1058A>G c.-7+1058A>G	CDK16	ENSG00000102225.17	transcript	ENST00000357227.9	protein_coding	1/15		chrX	47220163
chrX:47220438	C C	T T	1	a0001c0002t0014g0038 a0001c0002t0014g0038	1	HG02622.hp2 HG02622.hp2	intron_variant	MODIFIER	c.-7+1333C>T c.-7+1333C>T	CDK16	ENSG00000102225.17	transcript	ENST00000357227.9	protein_coding	1/15		chrX	47220438
chrX:47220742	C C	T T	4	a0001c0001t0006g0033 a0001c0001t0006g0044 a0001c0001t0006g0087 others(1): Show a0001c0001t0006g0033 a0001c0001t0006g0044 a0001c0001t0006g0087 a0001c0001t0006g0088	5	HG01255.hp1 HG02647.hp1 HG03486.hp1 others(2): Show HG01255.hp1 HG02647.hp1 HG03486.hp1 NA19030.hp2 NA20129.hp1	intron_variant	MODIFIER	c.-7+1637C>T c.-7+1637C>T	CDK16	ENSG00000102225.17	transcript	ENST00000357227.9	protein_coding	1/15		chrX	47220742
chrX:47220793	G G	A A	1	a0001c0001t0017g0045 a0001c0001t0017g0045	1	HG03486.hp2 HG03486.hp2	intron_variant	MODIFIER	c.-7+1688G>A c.-7+1688G>A	CDK16	ENSG00000102225.17	transcript	ENST00000357227.9	protein_coding	1/15		chrX	47220793
chrX:47221135	A A	G G	2	a0001c0001t0001g0032 a0001c0001t0001g0086 a0001c0001t0001g0032 a0001c0001t0001g0086	3	HG00323.hp2 HG00735.hp2 HG01074.hp1 HG00323.hp2 HG00735.hp2 HG01074.hp1	intron_variant	MODIFIER	c.-7+2030A>G c.-7+2030A>G	CDK16	ENSG00000102225.17	transcript	ENST00000357227.9	protein_coding	1/15		chrX	47221135
chrX:47221400	A A	C C	16	a0001c0001t0001g0021 a0001c0001t0001g0034 a0001c0001t0001g0036 others(13): Show a0001c0001t0001g0021 a0001c0001t0001g0034 a0001c0001t0001g0036 a0001c0001t0001g0037 a0001c0001t0007g0021 a0001c0002t0001g0035 a0001c0002t0002g0006 a0001c0002t0002g0039 a0001c0002t0004g0008 a0001c0002t0004g0041 a0001c0002t0008g0008 a0001c0002t0008g0022 a0001c0002t0011g0006 a0001c0002t0013g0008 a0001c0002t0013g0040 a0001c0002t0014g0038	29	HG00738.hp1 HG01081.hp2 HG01099.hp1 others(26): Show HG00738.hp1 HG01081.hp2 HG01099.hp1 HG01167.hp1 HG01169.hp1 HG01243.hp1 HG01884.hp2 HG01891.hp2 HG02257.hp2 HG02280.hp2 HG02451.hp1 HG02615.hp2 HG02622.hp2 HG02630.hp1 HG02630.hp2 HG02717.hp1 HG02818.hp1 HG02886.hp2 HG02896.hp1 HG02897.hp2 HG02922.hp1 HG03041.hp1 HG03130.hp1 HG03209.hp1 HG03516.hp1 HG03540.hp1 HG06807.hp1 NA19030.hp1 NA20300.hp2	intron_variant	MODIFIER	c.-6-2152A>C c.-6-2152A>C	CDK16	ENSG00000102225.17	transcript	ENST00000357227.9	protein_coding	1/15		chrX	47221400
chrX:47221571	C C	G G	1	a0001c0001t0001g0085 a0001c0001t0001g0085	1	HG04184.hp1 HG04184.hp1	intron_variant	MODIFIER	c.-6-1981C>G c.-6-1981C>G	CDK16	ENSG00000102225.17	transcript	ENST00000357227.9	protein_coding	1/15		chrX	47221571
chrX:47221580	TC TC	T T	1	a0001c0001t0001g0046 a0001c0001t0001g0046	1	NA18962.hp1 NA18962.hp1	intron_variant	MODIFIER	c.-6-1967delC c.-6-1967delC	CDK16	ENSG00000102225.17	transcript	ENST00000357227.9	protein_coding	1/15	INFO_REALIGN_3_PRIME	chrX	47221580
chrX:47221652	A A	G G	1	a0001c0001t0001g0037 a0001c0001t0001g0037	1	HG00738.hp1 HG00738.hp1	intron_variant	MODIFIER	c.-6-1900A>G c.-6-1900A>G	CDK16	ENSG00000102225.17	transcript	ENST00000357227.9	protein_coding	1/15		chrX	47221652
chrX:47221792	G G	A A	1	a0001c0001t0001g0047 a0001c0001t0001g0047	1	NA21309.hp2 NA21309.hp2	intron_variant	MODIFIER	c.-6-1760G>A c.-6-1760G>A	CDK16	ENSG00000102225.17	transcript	ENST00000357227.9	protein_coding	1/15		chrX	47221792
chrX:47222026	G G	A A	1	a0001c0001t0001g0048 a0001c0001t0001g0048	1	NA18989.hp1 NA18989.hp1	intron_variant	MODIFIER	c.-6-1526G>A c.-6-1526G>A	CDK16	ENSG00000102225.17	transcript	ENST00000357227.9	protein_coding	1/15		chrX	47222026
chrX:47222030	C C	T T	2	a0001c0001t0009g0031 a0001c0001t0009g0084 a0001c0001t0009g0031 a0001c0001t0009g0084	3	HG02055.hp1 HG02970.hp1 HG03041.hp2 HG02055.hp1 HG02970.hp1 HG03041.hp2	intron_variant	MODIFIER	c.-6-1522C>T c.-6-1522C>T	CDK16	ENSG00000102225.17	transcript	ENST00000357227.9	protein_coding	1/15		chrX	47222030
chrX:47222130	G G	A A	4	a0001c0001t0006g0033 a0001c0001t0006g0044 a0001c0001t0006g0087 others(1): Show a0001c0001t0006g0033 a0001c0001t0006g0044 a0001c0001t0006g0087 a0001c0001t0006g0088	5	HG01255.hp1 HG02647.hp1 HG03486.hp1 others(2): Show HG01255.hp1 HG02647.hp1 HG03486.hp1 NA19030.hp2 NA20129.hp1	intron_variant	MODIFIER	c.-6-1422G>A c.-6-1422G>A	CDK16	ENSG00000102225.17	transcript	ENST00000357227.9	protein_coding	1/15		chrX	47222130
chrX:47222452	G G	A A	1	a0001c0002t0008g0022 a0001c0002t0008g0022	2	HG01099.hp1 HG02818.hp1 HG01099.hp1 HG02818.hp1	intron_variant	MODIFIER	c.-6-1100G>A c.-6-1100G>A	CDK16	ENSG00000102225.17	transcript	ENST00000357227.9	protein_coding	1/15		chrX	47222452
chrX:47222650	C C	CG CG	6	a0001c0001t0001g0050 a0001c0001t0001g0052 a0001c0001t0001g0053 others(3): Show a0001c0001t0001g0050 a0001c0001t0001g0052 a0001c0001t0001g0053 a0001c0001t0006g0087 a0001c0001t0012g0051 a0005c0006t0001g0049	6	HG01255.hp1 HG03098.hp1 HG03688.hp1 others(3): Show HG01255.hp1 HG03098.hp1 HG03688.hp1 HG03927.hp2 NA18979.hp2 NA19006.hp1	intron_variant	MODIFIER	c.-6-895dupG c.-6-895dupG	CDK16	ENSG00000102225.17	transcript	ENST00000357227.9	protein_coding	1/15	INFO_REALIGN_3_PRIME	chrX	47222650
chrX:47222666	T T	TG TG	35	a0001c0001t0001g0005 a0001c0001t0001g0014 a0001c0001t0001g0018 others(32): Show a0001c0001t0001g0005 a0001c0001t0001g0014 a0001c0001t0001g0018 a0001c0001t0001g0020 a0001c0001t0001g0026 a0001c0001t0001g0027 a0001c0001t0001g0028 a0001c0001t0001g0029 a0001c0001t0001g0036 a0001c0001t0001g0043 a0001c0001t0001g0052 a0001c0001t0001g0053 a0001c0001t0001g0071 a0001c0001t0001g0072 a0001c0001t0001g0073 a0001c0001t0001g0074 a0001c0001t0001g0075 a0001c0001t0001g0077 a0001c0001t0001g0078 a0001c0001t0001g0079 a0001c0001t0001g0080 a0001c0001t0001g0081 a0001c0001t0001g0082 a0001c0001t0001g0085 a0001c0001t0001g0086 a0001c0001t0003g0076 a0001c0001t0005g0005 a0001c0001t0006g0033 a0001c0001t0006g0044 a0001c0001t0007g0005 a0001c0001t0009g0084 a0001c0001t0010g0018 a0001c0001t0010g0026 a0001c0001t0019g0029 a0001c0002t0004g0041	56	HG00280.hp1 HG00408.hp1 HG00544.hp2 others(53): Show HG00280.hp1 HG00408.hp1 HG00544.hp2 HG00558.hp1 HG00558.hp2 HG00597.hp1 HG00597.hp2 HG00735.hp2 HG01109.hp1 HG01123.hp1 HG01243.hp1 HG01952.hp1 HG01978.hp1 HG01993.hp2 HG02055.hp1 HG02074.hp1 HG02080.hp1 HG02148.hp2 HG02280.hp1 HG02572.hp1 HG02698.hp1 HG02895.hp1 HG02970.hp2 HG03017.hp1 HG03041.hp1 HG03139.hp1 HG03486.hp1 HG03927.hp1 HG03927.hp2 HG04184.hp1 HG04184.hp2 HG04204.hp1 NA18906.hp2 NA18940.hp1 NA18947.hp1 NA18947.hp2 NA18956.hp1 NA18956.hp2 NA18957.hp2 NA18960.hp1 NA18961.hp1 NA18963.hp1 NA18969.hp2 NA18972.hp1 NA18972.hp2 NA18979.hp2 NA18985.hp1 NA18995.hp1 NA19001.hp1 NA19030.hp2 NA19067.hp1 NA19082.hp1 NA19083.hp1 NA19090.hp1 NA20129.hp1 NA20752.hp1	intron_variant	MODIFIER	c.-6-877dupG c.-6-877dupG	CDK16	ENSG00000102225.17	transcript	ENST00000357227.9	protein_coding	1/15	INFO_REALIGN_3_PRIME	chrX	47222666
chrX:47222666	T T	TGG TGG	5	a0001c0001t0001g0021 a0001c0001t0001g0083 a0001c0001t0006g0087 others(2): Show a0001c0001t0001g0021 a0001c0001t0001g0083 a0001c0001t0006g0087 a0001c0001t0006g0088 a0001c0001t0007g0021	5	HG01255.hp1 HG02257.hp2 HG02615.hp2 others(2): Show HG01255.hp1 HG02257.hp2 HG02615.hp2 HG02647.hp1 HG02897.hp1	intron_variant	MODIFIER	c.-6-878_-6-877dupGG c.-6-878_-6-877dupGG	CDK16	ENSG00000102225.17	transcript	ENST00000357227.9	protein_coding	1/15	INFO_REALIGN_3_PRIME	chrX	47222666
chrX:47222674	G G	T T	1	a0001c0001t0001g0030 a0001c0001t0001g0030	2	NA18944.hp1 NA19063.hp1 NA18944.hp1 NA19063.hp1	intron_variant	MODIFIER	c.-6-878G>T c.-6-878G>T	CDK16	ENSG00000102225.17	transcript	ENST00000357227.9	protein_coding	1/15		chrX	47222674
chrX:47222744	C C	T T	1	a0001c0002t0014g0038 a0001c0002t0014g0038	1	HG02622.hp2 HG02622.hp2	intron_variant	MODIFIER	c.-6-808C>T c.-6-808C>T	CDK16	ENSG00000102225.17	transcript	ENST00000357227.9	protein_coding	1/15		chrX	47222744
chrX:47222850	G G	T T	84	a0001c0001t0001g0001 a0001c0001t0001g0004 a0001c0001t0001g0005 others(81): Show a0001c0001t0001g0001 a0001c0001t0001g0004 a0001c0001t0001g0005 a0001c0001t0001g0007 a0001c0001t0001g0010 a0001c0001t0001g0011 a0001c0001t0001g0012 a0001c0001t0001g0013 a0001c0001t0001g0015 a0001c0001t0001g0016 a0001c0001t0001g0017 a0001c0001t0001g0018 a0001c0001t0001g0021 a0001c0001t0001g0024 a0001c0001t0001g0025 a0001c0001t0001g0026 a0001c0001t0001g0027 a0001c0001t0001g0028 a0001c0001t0001g0029 a0001c0001t0001g0034 a0001c0001t0001g0036 a0001c0001t0001g0037 a0001c0001t0001g0043 a0001c0001t0001g0047 a0001c0001t0001g0050 a0001c0001t0001g0052 a0001c0001t0001g0053 a0001c0001t0001g0060 a0001c0001t0001g0061 a0001c0001t0001g0062 a0001c0001t0001g0063 a0001c0001t0001g0064 a0001c0001t0001g0065 a0001c0001t0001g0066 a0001c0001t0001g0067 a0001c0001t0001g0068 a0001c0001t0001g0077 a0001c0001t0001g0078 a0001c0001t0001g0079 a0001c0001t0001g0080 a0001c0001t0001g0081 a0001c0001t0001g0082 a0001c0001t0001g0089 a0001c0001t0001g0090 a0001c0001t0003g0007 a0001c0001t0003g0076 a0001c0001t0005g0001 a0001c0001t0005g0005 a0001c0001t0005g0011 a0001c0001t0005g0025 a0001c0001t0006g0033 a0001c0001t0006g0044 a0001c0001t0006g0087 a0001c0001t0006g0088 a0001c0001t0007g0005 a0001c0001t0007g0021 a0001c0001t0009g0031 a0001c0001t0009g0084 a0001c0001t0010g0018 a0001c0001t0010g0026 a0001c0001t0010g0091 a0001c0001t0012g0004 a0001c0001t0012g0051 a0001c0001t0017g0045 a0001c0001t0018g0001 a0001c0001t0019g0029 a0001c0001t0020g0001 a0001c0001t0021g0069 a0001c0002t0001g0035 a0001c0002t0002g0006 a0001c0002t0002g0039 a0001c0002t0004g0008 a0001c0002t0004g0041 a0001c0002t0008g0008 a0001c0002t0008g0022 a0001c0002t0011g0006 a0001c0002t0013g0008 a0001c0002t0013g0040 a0001c0002t0014g0038 a0002c0003t0001g0001 a0003c0004t0015g0042 a0004c0005t0001g0070 a0005c0006t0001g0049 a0006c0007t0001g0001	209	HG00140.hp1 HG00280.hp1 HG00408.hp1 others(206): Show HG00140.hp1 HG00280.hp1 HG00408.hp1 HG00408.hp2 HG00423.hp1 HG00423.hp2 HG00438.hp1 HG00438.hp2 HG00544.hp1 HG00597.hp1 HG00597.hp2 HG00639.hp1 HG00639.hp2 HG00733.hp2 HG00735.hp1 HG00738.hp1 HG00741.hp1 HG00741.hp2 HG01070.hp1 HG01081.hp2 HG01099.hp1 HG01106.hp1 HG01109.hp1 HG01123.hp1 HG01123.hp2 HG01167.hp1 HG01169.hp1 HG01169.hp2 HG01243.hp1 HG01255.hp1 HG01358.hp1 HG01361.hp1 HG01361.hp2 HG01433.hp1 HG01496.hp1 HG01516.hp2 HG01884.hp2 HG01891.hp2 HG01934.hp1 HG01952.hp1 HG01978.hp2 HG01993.hp2 HG02027.hp1 HG02040.hp1 HG02055.hp1 HG02071.hp1 HG02074.hp1 HG02080.hp1 HG02080.hp2 HG02083.hp1 HG02135.hp1 HG02145.hp1 HG02148.hp2 HG02155.hp2 HG02165.hp1 HG02257.hp1 HG02257.hp2 HG02258.hp1 HG02273.hp1 HG02280.hp1 HG02280.hp2 HG02293.hp2 HG02451.hp1 HG02451.hp2 HG02486.hp1 HG02523.hp2 HG02559.hp1 HG02559.hp2 HG02572.hp1 HG02602.hp1 HG02615.hp2 HG02622.hp1 HG02622.hp2 HG02630.hp1 HG02630.hp2 HG02647.hp1 HG02698.hp1 HG02717.hp1 HG02723.hp1 HG02735.hp1 HG02738.hp1 HG02809.hp1 HG02809.hp2 HG02818.hp1 HG02818.hp2 HG02886.hp1 HG02886.hp2 HG02896.hp1 HG02896.hp2 HG02897.hp2 HG02922.hp1 HG02922.hp2 HG02970.hp1 HG02976.hp1 HG03017.hp1 HG03041.hp1 HG03041.hp2 HG03098.hp1 HG03130.hp1 HG03139.hp1 HG03195.hp1 HG03195.hp2 HG03209.hp1 HG03453.hp1 HG03453.hp2 HG03471.hp1 HG03486.hp1 HG03486.hp2 HG03490.hp1 HG03491.hp2 HG03516.hp1 HG03516.hp2 HG03540.hp1 HG03540.hp2 HG03654.hp1 HG03688.hp1 HG03834.hp2 HG03927.hp2 HG04184.hp2 HG04199.hp1 HG04228.hp1 HG06807.hp1 HG06807.hp2 NA18522.hp1 NA18612.hp1 NA18906.hp2 NA18939.hp2 NA18941.hp2 NA18946.hp2 NA18947.hp2 NA18951.hp1 NA18952.hp1 NA18953.hp1 NA18955.hp1 NA18956.hp1 NA18957.hp1 NA18957.hp2 NA18959.hp1 NA18960.hp1 NA18961.hp1 NA18963.hp1 NA18963.hp2 NA18964.hp1 NA18965.hp1 NA18967.hp1 NA18968.hp1 NA18969.hp2 NA18970.hp1 NA18971.hp1 NA18972.hp1 NA18972.hp2 NA18973.hp2 NA18977.hp1 NA18979.hp1 NA18979.hp2 NA18982.hp1 NA18983.hp1 NA18984.hp1 NA18985.hp1 NA18988.hp1 NA18994.hp1 NA18995.hp1 NA18998.hp1 NA18998.hp2 NA18999.hp1 NA18999.hp2 NA19000.hp1 NA19001.hp1 NA19001.hp2 NA19002.hp1 NA19002.hp2 NA19005.hp1 NA19006.hp1 NA19007.hp1 NA19009.hp1 NA19010.hp1 NA19010.hp2 NA19012.hp1 NA19030.hp1 NA19030.hp2 NA19055.hp1 NA19056.hp1 NA19057.hp1 NA19058.hp1 NA19062.hp1 NA19065.hp1 NA19066.hp1 NA19067.hp1 NA19068.hp1 NA19072.hp1 NA19076.hp1 NA19079.hp1 NA19080.hp1 NA19080.hp2 NA19084.hp2 NA19086.hp1 NA19089.hp1 NA19090.hp1 NA19090.hp2 NA19091.hp1 NA19240.hp1 NA20129.hp1 NA20129.hp2 NA20300.hp2 NA20752.hp1 NA20905.hp1 NA21309.hp1 NA21309.hp2 homoSapiens_chm13v2.hp1	intron_variant	MODIFIER	c.-6-702G>T c.-6-702G>T	CDK16	ENSG00000102225.17	transcript	ENST00000357227.9	protein_coding	1/15		chrX	47222850
chrX:47222887	A A	AC AC	3	a0001c0001t0001g0060 a0001c0001t0001g0061 a0001c0001t0001g0062 a0001c0001t0001g0060 a0001c0001t0001g0061 a0001c0001t0001g0062	3	HG00741.hp1 HG01070.hp1 NA19001.hp2 HG00741.hp1 HG01070.hp1 NA19001.hp2	intron_variant	MODIFIER	c.-6-658dupC c.-6-658dupC	CDK16	ENSG00000102225.17	transcript	ENST00000357227.9	protein_coding	1/15	INFO_REALIGN_3_PRIME	chrX	47222887
chrX:47222957	T T	TC TC	18	a0001c0001t0001g0011 a0001c0001t0001g0017 a0001c0001t0001g0018 others(15): Show a0001c0001t0001g0011 a0001c0001t0001g0017 a0001c0001t0001g0018 a0001c0001t0001g0019 a0001c0001t0001g0029 a0001c0001t0001g0053 a0001c0001t0001g0059 a0001c0001t0001g0061 a0001c0001t0001g0062 a0001c0001t0001g0075 a0001c0001t0001g0082 a0001c0001t0001g0085 a0001c0001t0005g0011 a0001c0001t0006g0044 a0001c0001t0010g0018 a0001c0001t0016g0019 a0001c0001t0019g0029 a0001c0002t0013g0040	28	HG00408.hp1 HG00408.hp2 HG00423.hp2 others(25): Show HG00408.hp1 HG00408.hp2 HG00423.hp2 HG00544.hp1 HG00741.hp1 HG01192.hp1 HG01496.hp2 HG02027.hp1 HG02080.hp2 HG02572.hp1 HG03209.hp1 HG03927.hp2 HG04115.hp1 HG04184.hp1 HG04184.hp2 HG04228.hp1 NA18947.hp2 NA18948.hp1 NA18969.hp2 NA18994.hp1 NA18998.hp2 NA19001.hp2 NA19012.hp1 NA19030.hp2 NA19066.hp1 NA19067.hp1 NA19083.hp1 NA19090.hp1	intron_variant	MODIFIER	c.-6-585dupC c.-6-585dupC	CDK16	ENSG00000102225.17	transcript	ENST00000357227.9	protein_coding	1/15	INFO_REALIGN_3_PRIME	chrX	47222957
chrX:47222957	TC TC	T T	3	a0001c0001t0001g0024 a0001c0001t0001g0071 a0005c0006t0001g0049 a0001c0001t0001g0024 a0001c0001t0001g0071 a0005c0006t0001g0049	4	NA18947.hp1 NA18955.hp1 NA18977.hp1 others(1): Show NA18947.hp1 NA18955.hp1 NA18977.hp1 NA19006.hp1	intron_variant	MODIFIER	c.-6-585delC c.-6-585delC	CDK16	ENSG00000102225.17	transcript	ENST00000357227.9	protein_coding	1/15	INFO_REALIGN_3_PRIME	chrX	47222957
chrX:47222967	C C	A A	1	a0001c0001t0001g0054 a0001c0001t0001g0054	1	HG02148.hp1 HG02148.hp1	intron_variant	MODIFIER	c.-6-585C>A c.-6-585C>A	CDK16	ENSG00000102225.17	transcript	ENST00000357227.9	protein_coding	1/15		chrX	47222967
chrX:47223121	A A	G G	16	a0001c0001t0001g0021 a0001c0001t0001g0034 a0001c0001t0001g0036 others(13): Show a0001c0001t0001g0021 a0001c0001t0001g0034 a0001c0001t0001g0036 a0001c0001t0001g0037 a0001c0001t0007g0021 a0001c0002t0001g0035 a0001c0002t0002g0006 a0001c0002t0002g0039 a0001c0002t0004g0008 a0001c0002t0004g0041 a0001c0002t0008g0008 a0001c0002t0008g0022 a0001c0002t0011g0006 a0001c0002t0013g0008 a0001c0002t0013g0040 a0001c0002t0014g0038	29	HG00738.hp1 HG01081.hp2 HG01099.hp1 others(26): Show HG00738.hp1 HG01081.hp2 HG01099.hp1 HG01167.hp1 HG01169.hp1 HG01243.hp1 HG01884.hp2 HG01891.hp2 HG02257.hp2 HG02280.hp2 HG02451.hp1 HG02615.hp2 HG02622.hp2 HG02630.hp1 HG02630.hp2 HG02717.hp1 HG02818.hp1 HG02886.hp2 HG02896.hp1 HG02897.hp2 HG02922.hp1 HG03041.hp1 HG03130.hp1 HG03209.hp1 HG03516.hp1 HG03540.hp1 HG06807.hp1 NA19030.hp1 NA20300.hp2	intron_variant	MODIFIER	c.-6-431A>G c.-6-431A>G	CDK16	ENSG00000102225.17	transcript	ENST00000357227.9	protein_coding	1/15		chrX	47223121
chrX:47223217	C C	G G	2	a0001c0001t0009g0031 a0001c0001t0009g0084 a0001c0001t0009g0031 a0001c0001t0009g0084	3	HG02055.hp1 HG02970.hp1 HG03041.hp2 HG02055.hp1 HG02970.hp1 HG03041.hp2	intron_variant	MODIFIER	c.-6-335C>G c.-6-335C>G	CDK16	ENSG00000102225.17	transcript	ENST00000357227.9	protein_coding	1/15		chrX	47223217
chrX:47223273	C C	T T	21	a0001c0001t0001g0010 a0001c0001t0001g0013 a0001c0001t0001g0016 others(18): Show a0001c0001t0001g0010 a0001c0001t0001g0013 a0001c0001t0001g0016 a0001c0001t0001g0017 a0001c0001t0001g0018 a0001c0001t0001g0024 a0001c0001t0001g0028 a0001c0001t0001g0043 a0001c0001t0001g0052 a0001c0001t0001g0062 a0001c0001t0001g0066 a0001c0001t0001g0067 a0001c0001t0001g0068 a0001c0001t0001g0079 a0001c0001t0001g0080 a0001c0001t0001g0081 a0001c0001t0001g0090 a0001c0001t0010g0018 a0001c0001t0021g0069 a0004c0005t0001g0070 a0005c0006t0001g0049	40	HG00408.hp1 HG00544.hp1 HG00639.hp2 others(37): Show HG00408.hp1 HG00544.hp1 HG00639.hp2 HG01496.hp1 HG01978.hp2 HG01993.hp2 HG02027.hp1 HG02080.hp2 HG02083.hp1 HG02148.hp2 HG02155.hp2 HG02165.hp1 HG02273.hp1 HG02293.hp2 NA18946.hp2 NA18947.hp2 NA18955.hp1 NA18960.hp1 NA18963.hp1 NA18965.hp1 NA18968.hp1 NA18971.hp1 NA18977.hp1 NA18979.hp2 NA18983.hp1 NA18985.hp1 NA18995.hp1 NA19001.hp2 NA19005.hp1 NA19006.hp1 NA19007.hp1 NA19056.hp1 NA19062.hp1 NA19066.hp1 NA19067.hp1 NA19076.hp1 NA19079.hp1 NA19089.hp1 NA19090.hp1 NA19091.hp1	intron_variant	MODIFIER	c.-6-279C>T c.-6-279C>T	CDK16	ENSG00000102225.17	transcript	ENST00000357227.9	protein_coding	1/15		chrX	47223273
chrX:47223377	T T	A A	4	a0001c0001t0006g0033 a0001c0001t0006g0044 a0001c0001t0006g0087 others(1): Show a0001c0001t0006g0033 a0001c0001t0006g0044 a0001c0001t0006g0087 a0001c0001t0006g0088	5	HG01255.hp1 HG02647.hp1 HG03486.hp1 others(2): Show HG01255.hp1 HG02647.hp1 HG03486.hp1 NA19030.hp2 NA20129.hp1	intron_variant	MODIFIER	c.-6-175T>A c.-6-175T>A	CDK16	ENSG00000102225.17	transcript	ENST00000357227.9	protein_coding	1/15		chrX	47223377
chrX:47223787	A A	G G	5	a0001c0001t0001g0016 a0001c0001t0001g0080 a0001c0001t0001g0081 others(2): Show a0001c0001t0001g0016 a0001c0001t0001g0080 a0001c0001t0001g0081 a0001c0001t0001g0090 a0004c0005t0001g0070	8	HG00639.hp2 HG01496.hp1 HG01978.hp2 others(5): Show HG00639.hp2 HG01496.hp1 HG01978.hp2 HG01993.hp2 HG02148.hp2 HG02273.hp1 NA18968.hp1 NA19089.hp1	intron_variant	MODIFIER	c.202+28A>G c.202+28A>G	CDK16	ENSG00000102225.17	transcript	ENST00000357227.9	protein_coding	2/15		chrX	47223787
chrX:47223917	G G	A A	1	a0001c0001t0001g0063 a0001c0001t0001g0063	1	NA18988.hp1 NA18988.hp1	intron_variant	MODIFIER	c.202+158G>A c.202+158G>A	CDK16	ENSG00000102225.17	transcript	ENST00000357227.9	protein_coding	2/15		chrX	47223917
chrX:47224257	G G	A A	1	a0001c0001t0001g0055 a0001c0001t0001g0055	1	NA19043.hp1 NA19043.hp1	intron_variant	MODIFIER	c.203-128G>A c.203-128G>A	CDK16	ENSG00000102225.17	transcript	ENST00000357227.9	protein_coding	2/15		chrX	47224257
chrX:47224970	C C	T T	3	a0001c0001t0001g0015 a0001c0001t0001g0078 a0001c0001t0001g0089 a0001c0001t0001g0015 a0001c0001t0001g0078 a0001c0001t0001g0089	6	HG02818.hp2 HG02886.hp1 HG03139.hp1 others(3): Show HG02818.hp2 HG02886.hp1 HG03139.hp1 HG03195.hp1 HG03453.hp1 HG03471.hp1	intron_variant	MODIFIER	c.520-18C>T c.520-18C>T	CDK16	ENSG00000102225.17	transcript	ENST00000357227.9	protein_coding	5/15		chrX	47224970
chrX:47225307	AG AG	A A	1	a0001c0001t0021g0069 a0001c0001t0021g0069	1	NA19076.hp1 NA19076.hp1	intron_variant	MODIFIER	c.634+208delG c.634+208delG	CDK16	ENSG00000102225.17	transcript	ENST00000357227.9	protein_coding	6/15	INFO_REALIGN_3_PRIME	chrX	47225307
chrX:47225335	A A	G G	1	a0001c0001t0001g0074 a0001c0001t0001g0074	1	HG00558.hp2 HG00558.hp2	intron_variant	MODIFIER	c.634+233A>G c.634+233A>G	CDK16	ENSG00000102225.17	transcript	ENST00000357227.9	protein_coding	6/15		chrX	47225335
chrX:47225488	CA CA	C C	1	a0001c0001t0021g0069 a0001c0001t0021g0069	1	NA19076.hp1 NA19076.hp1	intron_variant	MODIFIER	c.635-279delA c.635-279delA	CDK16	ENSG00000102225.17	transcript	ENST00000357227.9	protein_coding	6/15	INFO_REALIGN_3_PRIME	chrX	47225488
chrX:47225556	C C	T T	4	a0001c0001t0001g0004 a0001c0001t0001g0077 a0001c0001t0012g0004 others(1): Show a0001c0001t0001g0004 a0001c0001t0001g0077 a0001c0001t0012g0004 a0001c0001t0012g0051	15	HG02145.hp1 HG02258.hp1 HG02280.hp1 others(12): Show HG02145.hp1 HG02258.hp1 HG02280.hp1 HG02486.hp1 HG02559.hp1 HG02559.hp2 HG02809.hp1 HG02922.hp2 HG02976.hp1 HG03098.hp1 HG03195.hp2 HG03453.hp2 NA18522.hp1 NA19240.hp1 NA20129.hp2	intron_variant	MODIFIER	c.635-216C>T c.635-216C>T	CDK16	ENSG00000102225.17	transcript	ENST00000357227.9	protein_coding	6/15		chrX	47225556
chrX:47226229	C C	T T	4	a0001c0001t0001g0007 a0001c0001t0001g0065 a0001c0001t0003g0007 others(1): Show a0001c0001t0001g0007 a0001c0001t0001g0065 a0001c0001t0003g0007 a0001c0001t0003g0076	10	HG00438.hp2 HG02071.hp1 NA18953.hp1 others(7): Show HG00438.hp2 HG02071.hp1 NA18953.hp1 NA18957.hp2 NA18967.hp1 NA18998.hp1 NA19000.hp1 NA19002.hp2 NA19009.hp1 NA19010.hp2	intron_variant	MODIFIER	c.793-50C>T c.793-50C>T	CDK16	ENSG00000102225.17	transcript	ENST00000357227.9	protein_coding	8/15		chrX	47226229
chrX:47226274	C C	T T	2	a0001c0001t0001g0009 a0001c0001t0001g0054 a0001c0001t0001g0009 a0001c0001t0001g0054	8	HG01256.hp1 HG01257.hp1 HG01258.hp1 others(5): Show HG01256.hp1 HG01257.hp1 HG01258.hp1 HG01928.hp1 HG01975.hp2 HG02004.hp2 HG02148.hp1 HG02273.hp2	splice_region_variant&intron_variant	LOW	c.793-5C>T c.793-5C>T	CDK16	ENSG00000102225.17	transcript	ENST00000357227.9	protein_coding	8/15		chrX	47226274
chrX:47226743	AG AG	A A	1	a0004c0005t0001g0070 a0004c0005t0001g0070	1	NA19089.hp1 NA19089.hp1	intron_variant	MODIFIER	c.1037+45delG c.1037+45delG	CDK16	ENSG00000102225.17	transcript	ENST00000357227.9	protein_coding	10/15	INFO_REALIGN_3_PRIME	chrX	47226743
chrX:47226790	T T	A A	1	a0004c0005t0001g0070 a0004c0005t0001g0070	1	NA19089.hp1 NA19089.hp1	intron_variant	MODIFIER	c.1038-22T>A c.1038-22T>A	CDK16	ENSG00000102225.17	transcript	ENST00000357227.9	protein_coding	10/15		chrX	47226790
chrX:47226948	G G	A A	84	a0001c0001t0001g0001 a0001c0001t0001g0004 a0001c0001t0001g0005 others(81): Show a0001c0001t0001g0001 a0001c0001t0001g0004 a0001c0001t0001g0005 a0001c0001t0001g0007 a0001c0001t0001g0010 a0001c0001t0001g0011 a0001c0001t0001g0012 a0001c0001t0001g0013 a0001c0001t0001g0015 a0001c0001t0001g0016 a0001c0001t0001g0017 a0001c0001t0001g0018 a0001c0001t0001g0021 a0001c0001t0001g0024 a0001c0001t0001g0025 a0001c0001t0001g0026 a0001c0001t0001g0027 a0001c0001t0001g0028 a0001c0001t0001g0029 a0001c0001t0001g0034 a0001c0001t0001g0036 a0001c0001t0001g0037 a0001c0001t0001g0043 a0001c0001t0001g0047 a0001c0001t0001g0050 a0001c0001t0001g0052 a0001c0001t0001g0053 a0001c0001t0001g0060 a0001c0001t0001g0061 a0001c0001t0001g0062 a0001c0001t0001g0063 a0001c0001t0001g0064 a0001c0001t0001g0065 a0001c0001t0001g0066 a0001c0001t0001g0067 a0001c0001t0001g0068 a0001c0001t0001g0077 a0001c0001t0001g0078 a0001c0001t0001g0079 a0001c0001t0001g0080 a0001c0001t0001g0081 a0001c0001t0001g0082 a0001c0001t0001g0089 a0001c0001t0001g0090 a0001c0001t0003g0007 a0001c0001t0003g0076 a0001c0001t0005g0001 a0001c0001t0005g0005 a0001c0001t0005g0011 a0001c0001t0005g0025 a0001c0001t0006g0033 a0001c0001t0006g0044 a0001c0001t0006g0087 a0001c0001t0006g0088 a0001c0001t0007g0005 a0001c0001t0007g0021 a0001c0001t0009g0031 a0001c0001t0009g0084 a0001c0001t0010g0018 a0001c0001t0010g0026 a0001c0001t0010g0091 a0001c0001t0012g0004 a0001c0001t0012g0051 a0001c0001t0017g0045 a0001c0001t0018g0001 a0001c0001t0019g0029 a0001c0001t0020g0001 a0001c0001t0021g0069 a0001c0002t0001g0035 a0001c0002t0002g0006 a0001c0002t0002g0039 a0001c0002t0004g0008 a0001c0002t0004g0041 a0001c0002t0008g0008 a0001c0002t0008g0022 a0001c0002t0011g0006 a0001c0002t0013g0008 a0001c0002t0013g0040 a0001c0002t0014g0038 a0002c0003t0001g0001 a0003c0004t0015g0042 a0004c0005t0001g0070 a0005c0006t0001g0049 a0006c0007t0001g0001	209	HG00140.hp1 HG00280.hp1 HG00408.hp1 others(206): Show HG00140.hp1 HG00280.hp1 HG00408.hp1 HG00408.hp2 HG00423.hp1 HG00423.hp2 HG00438.hp1 HG00438.hp2 HG00544.hp1 HG00597.hp1 HG00597.hp2 HG00639.hp1 HG00639.hp2 HG00733.hp2 HG00735.hp1 HG00738.hp1 HG00741.hp1 HG00741.hp2 HG01070.hp1 HG01081.hp2 HG01099.hp1 HG01106.hp1 HG01109.hp1 HG01123.hp1 HG01123.hp2 HG01167.hp1 HG01169.hp1 HG01169.hp2 HG01243.hp1 HG01255.hp1 HG01358.hp1 HG01361.hp1 HG01361.hp2 HG01433.hp1 HG01496.hp1 HG01516.hp2 HG01884.hp2 HG01891.hp2 HG01934.hp1 HG01952.hp1 HG01978.hp2 HG01993.hp2 HG02027.hp1 HG02040.hp1 HG02055.hp1 HG02071.hp1 HG02074.hp1 HG02080.hp1 HG02080.hp2 HG02083.hp1 HG02135.hp1 HG02145.hp1 HG02148.hp2 HG02155.hp2 HG02165.hp1 HG02257.hp1 HG02257.hp2 HG02258.hp1 HG02273.hp1 HG02280.hp1 HG02280.hp2 HG02293.hp2 HG02451.hp1 HG02451.hp2 HG02486.hp1 HG02523.hp2 HG02559.hp1 HG02559.hp2 HG02572.hp1 HG02602.hp1 HG02615.hp2 HG02622.hp1 HG02622.hp2 HG02630.hp1 HG02630.hp2 HG02647.hp1 HG02698.hp1 HG02717.hp1 HG02723.hp1 HG02735.hp1 HG02738.hp1 HG02809.hp1 HG02809.hp2 HG02818.hp1 HG02818.hp2 HG02886.hp1 HG02886.hp2 HG02896.hp1 HG02896.hp2 HG02897.hp2 HG02922.hp1 HG02922.hp2 HG02970.hp1 HG02976.hp1 HG03017.hp1 HG03041.hp1 HG03041.hp2 HG03098.hp1 HG03130.hp1 HG03139.hp1 HG03195.hp1 HG03195.hp2 HG03209.hp1 HG03453.hp1 HG03453.hp2 HG03471.hp1 HG03486.hp1 HG03486.hp2 HG03490.hp1 HG03491.hp2 HG03516.hp1 HG03516.hp2 HG03540.hp1 HG03540.hp2 HG03654.hp1 HG03688.hp1 HG03834.hp2 HG03927.hp2 HG04184.hp2 HG04199.hp1 HG04228.hp1 HG06807.hp1 HG06807.hp2 NA18522.hp1 NA18612.hp1 NA18906.hp2 NA18939.hp2 NA18941.hp2 NA18946.hp2 NA18947.hp2 NA18951.hp1 NA18952.hp1 NA18953.hp1 NA18955.hp1 NA18956.hp1 NA18957.hp1 NA18957.hp2 NA18959.hp1 NA18960.hp1 NA18961.hp1 NA18963.hp1 NA18963.hp2 NA18964.hp1 NA18965.hp1 NA18967.hp1 NA18968.hp1 NA18969.hp2 NA18970.hp1 NA18971.hp1 NA18972.hp1 NA18972.hp2 NA18973.hp2 NA18977.hp1 NA18979.hp1 NA18979.hp2 NA18982.hp1 NA18983.hp1 NA18984.hp1 NA18985.hp1 NA18988.hp1 NA18994.hp1 NA18995.hp1 NA18998.hp1 NA18998.hp2 NA18999.hp1 NA18999.hp2 NA19000.hp1 NA19001.hp1 NA19001.hp2 NA19002.hp1 NA19002.hp2 NA19005.hp1 NA19006.hp1 NA19007.hp1 NA19009.hp1 NA19010.hp1 NA19010.hp2 NA19012.hp1 NA19030.hp1 NA19030.hp2 NA19055.hp1 NA19056.hp1 NA19057.hp1 NA19058.hp1 NA19062.hp1 NA19065.hp1 NA19066.hp1 NA19067.hp1 NA19068.hp1 NA19072.hp1 NA19076.hp1 NA19079.hp1 NA19080.hp1 NA19080.hp2 NA19084.hp2 NA19086.hp1 NA19089.hp1 NA19090.hp1 NA19090.hp2 NA19091.hp1 NA19240.hp1 NA20129.hp1 NA20129.hp2 NA20300.hp2 NA20752.hp1 NA20905.hp1 NA21309.hp1 NA21309.hp2 homoSapiens_chm13v2.hp1	intron_variant	MODIFIER	c.1135+39G>A c.1135+39G>A	CDK16	ENSG00000102225.17	transcript	ENST00000357227.9	protein_coding	11/15		chrX	47226948
chrX:47226974	T T	TA TA	1	a0001c0001t0021g0069 a0001c0001t0021g0069	1	NA19076.hp1 NA19076.hp1	intron_variant	MODIFIER	c.1136-18dupA c.1136-18dupA	CDK16	ENSG00000102225.17	transcript	ENST00000357227.9	protein_coding	11/15	INFO_REALIGN_3_PRIME	chrX	47226974
chrX:47227117	G G	T T	1	a0001c0002t0002g0039 a0001c0002t0002g0039	1	HG02280.hp2 HG02280.hp2	intron_variant	MODIFIER	c.1241+18G>T c.1241+18G>T	CDK16	ENSG00000102225.17	transcript	ENST00000357227.9	protein_coding	12/15		chrX	47227117
chrX:47227263	CA CA	C C	1	a0004c0005t0001g0070 a0004c0005t0001g0070	1	NA19089.hp1 NA19089.hp1	intron_variant	MODIFIER	c.1284+42delA c.1284+42delA	CDK16	ENSG00000102225.17	transcript	ENST00000357227.9	protein_coding	13/15	INFO_REALIGN_3_PRIME	chrX	47227263
chrX:47227269	T T	G G	1	a0001c0001t0001g0066 a0001c0001t0001g0066	1	HG02293.hp2 HG02293.hp2	intron_variant	MODIFIER	c.1284+46T>G c.1284+46T>G	CDK16	ENSG00000102225.17	transcript	ENST00000357227.9	protein_coding	13/15		chrX	47227269
chrX:47227273	GA GA	G G	1	a0004c0005t0001g0070 a0004c0005t0001g0070	1	NA19089.hp1 NA19089.hp1	intron_variant	MODIFIER	c.1284+53delA c.1284+53delA	CDK16	ENSG00000102225.17	transcript	ENST00000357227.9	protein_coding	13/15	INFO_REALIGN_3_PRIME	chrX	47227273
chrX:47227282	A A	AC AC	26	a0001c0001t0001g0003 a0001c0001t0001g0020 a0001c0001t0001g0021 others(23): Show a0001c0001t0001g0003 a0001c0001t0001g0020 a0001c0001t0001g0021 a0001c0001t0001g0025 a0001c0001t0001g0026 a0001c0001t0001g0030 a0001c0001t0001g0032 a0001c0001t0001g0034 a0001c0001t0001g0036 a0001c0001t0001g0037 a0001c0001t0001g0050 a0001c0001t0001g0057 a0001c0001t0001g0059 a0001c0001t0001g0065 a0001c0001t0001g0071 a0001c0001t0001g0074 a0001c0001t0001g0075 a0001c0001t0001g0083 a0001c0001t0001g0086 a0001c0001t0005g0025 a0001c0001t0007g0003 a0001c0001t0007g0021 a0001c0001t0010g0026 a0001c0002t0002g0006 a0001c0002t0002g0039 a0001c0002t0011g0006	61	HG00323.hp1 HG00323.hp2 HG00558.hp2 others(58): Show HG00323.hp1 HG00323.hp2 HG00558.hp2 HG00621.hp1 HG00642.hp1 HG00673.hp1 HG00733.hp1 HG00735.hp2 HG00738.hp1 HG01074.hp1 HG01081.hp1 HG01167.hp1 HG01169.hp1 HG01261.hp1 HG01515.hp1 HG01516.hp1 HG01884.hp1 HG01891.hp2 HG01943.hp1 HG01952.hp1 HG02071.hp1 HG02129.hp1 HG02257.hp2 HG02280.hp2 HG02293.hp1 HG02451.hp1 HG02523.hp1 HG02615.hp2 HG02630.hp1 HG02630.hp2 HG02717.hp1 HG02886.hp2 HG02895.hp1 HG02896.hp1 HG02897.hp1 HG02897.hp2 HG02976.hp2 HG03041.hp1 HG03540.hp1 HG03579.hp1 HG03688.hp1 HG03927.hp1 NA18747.hp1 NA18940.hp1 NA18941.hp1 NA18944.hp1 NA18945.hp1 NA18946.hp1 NA18947.hp1 NA18948.hp1 NA18956.hp1 NA18964.hp2 NA18966.hp1 NA18990.hp1 NA19060.hp1 NA19063.hp1 NA19065.hp2 NA19070.hp1 NA19072.hp1 NA19083.hp1 NA19084.hp2	intron_variant	MODIFIER	c.1284+68dupC c.1284+68dupC	CDK16	ENSG00000102225.17	transcript	ENST00000357227.9	protein_coding	13/15	INFO_REALIGN_3_PRIME	chrX	47227282
chrX:47227282	A A	ACC ACC	2	a0001c0001t0001g0023 a0001c0001t0001g0073 a0001c0001t0001g0023 a0001c0001t0001g0073	3	HG00544.hp2 HG02056.hp1 NA18968.hp2 HG00544.hp2 HG02056.hp1 NA18968.hp2	intron_variant	MODIFIER	c.1284+67_1284+68dup others(2): Show c.1284+67_1284+68dupCC	CDK16	ENSG00000102225.17	transcript	ENST00000357227.9	protein_coding	13/15	INFO_REALIGN_3_PRIME	chrX	47227282
chrX:47227292	T T	C C	2	a0001c0001t0001g0056 a0001c0001t0001g0072 a0001c0001t0001g0056 a0001c0001t0001g0072	2	NA18956.hp2 NA19088.hp1 NA18956.hp2 NA19088.hp1	intron_variant	MODIFIER	c.1284+69T>C c.1284+69T>C	CDK16	ENSG00000102225.17	transcript	ENST00000357227.9	protein_coding	13/15		chrX	47227292
chrX:47227356	C C	T T	1	a0001c0001t0001g0057 a0001c0001t0001g0057	1	NA18966.hp1 NA18966.hp1	intron_variant	MODIFIER	c.1285-23C>T c.1285-23C>T	CDK16	ENSG00000102225.17	transcript	ENST00000357227.9	protein_coding	13/15		chrX	47227356
chrX:47227567	C C	T T	1	a0001c0001t0001g0068 a0001c0001t0001g0068	1	NA19091.hp1 NA19091.hp1	intron_variant	MODIFIER	c.1375+98C>T c.1375+98C>T	CDK16	ENSG00000102225.17	transcript	ENST00000357227.9	protein_coding	14/15		chrX	47227567
chrX:47227625	AT AT	A A	1	a0004c0005t0001g0070 a0004c0005t0001g0070	1	NA19089.hp1 NA19089.hp1	intron_variant	MODIFIER	c.1375+162delT c.1375+162delT	CDK16	ENSG00000102225.17	transcript	ENST00000357227.9	protein_coding	14/15	INFO_REALIGN_3_PRIME	chrX	47227625
chrX:47227640	G G	C C	1	a0001c0001t0001g0080 a0001c0001t0001g0080	1	HG02148.hp2 HG02148.hp2	intron_variant	MODIFIER	c.1375+171G>C c.1375+171G>C	CDK16	ENSG00000102225.17	transcript	ENST00000357227.9	protein_coding	14/15		chrX	47227640
chrX:47227666	TA TA	T T	1	a0004c0005t0001g0070 a0004c0005t0001g0070	1	NA19089.hp1 NA19089.hp1	intron_variant	MODIFIER	c.1375+201delA c.1375+201delA	CDK16	ENSG00000102225.17	transcript	ENST00000357227.9	protein_coding	14/15	INFO_REALIGN_3_PRIME	chrX	47227666
chrX:47227779	TA TA	T T	1	a0004c0005t0001g0070 a0004c0005t0001g0070	1	NA19089.hp1 NA19089.hp1	intron_variant	MODIFIER	c.1375+313delA c.1375+313delA	CDK16	ENSG00000102225.17	transcript	ENST00000357227.9	protein_coding	14/15	INFO_REALIGN_3_PRIME	chrX	47227779
chrX:47227836	T T	G G	2	a0001c0001t0001g0064 a0003c0004t0015g0042 a0001c0001t0001g0064 a0003c0004t0015g0042	2	HG01934.hp1 HG02896.hp2 HG01934.hp1 HG02896.hp2	intron_variant	MODIFIER	c.1375+367T>G c.1375+367T>G	CDK16	ENSG00000102225.17	transcript	ENST00000357227.9	protein_coding	14/15		chrX	47227836
chrX:47227836	T T	TC TC	1	a0004c0005t0001g0070 a0004c0005t0001g0070	1	NA19089.hp1 NA19089.hp1	intron_variant	MODIFIER	c.1375+371dupC c.1375+371dupC	CDK16	ENSG00000102225.17	transcript	ENST00000357227.9	protein_coding	14/15	INFO_REALIGN_3_PRIME	chrX	47227836
chrX:47227994	TA TA	T T	1	a0004c0005t0001g0070 a0004c0005t0001g0070	1	NA19089.hp1 NA19089.hp1	intron_variant	MODIFIER	c.1375+530delA c.1375+530delA	CDK16	ENSG00000102225.17	transcript	ENST00000357227.9	protein_coding	14/15	INFO_REALIGN_3_PRIME	chrX	47227994
chrX:47228055	T T	C C	6	a0001c0001t0001g0013 a0001c0001t0001g0024 a0001c0001t0001g0043 others(3): Show a0001c0001t0001g0013 a0001c0001t0001g0024 a0001c0001t0001g0043 a0001c0001t0001g0079 a0001c0001t0021g0069 a0005c0006t0001g0049	11	NA18955.hp1 NA18960.hp1 NA18971.hp1 others(8): Show NA18955.hp1 NA18960.hp1 NA18971.hp1 NA18977.hp1 NA18983.hp1 NA18985.hp1 NA19006.hp1 NA19007.hp1 NA19056.hp1 NA19062.hp1 NA19076.hp1	intron_variant	MODIFIER	c.1376-512T>C c.1376-512T>C	CDK16	ENSG00000102225.17	transcript	ENST00000357227.9	protein_coding	14/15		chrX	47228055
chrX:47228280	T T	C C	1	a0001c0001t0001g0067 a0001c0001t0001g0067	1	HG02155.hp2 HG02155.hp2	intron_variant	MODIFIER	c.1376-287T>C c.1376-287T>C	CDK16	ENSG00000102225.17	transcript	ENST00000357227.9	protein_coding	14/15		chrX	47228280
chrX:47228413	G G	T T	3	a0001c0001t0001g0012 a0001c0001t0001g0027 a0001c0001t0001g0082 a0001c0001t0001g0012 a0001c0001t0001g0027 a0001c0001t0001g0082	8	HG01106.hp1 HG01123.hp1 HG01361.hp2 others(5): Show HG01106.hp1 HG01123.hp1 HG01361.hp2 HG01516.hp2 HG02602.hp1 HG04184.hp2 NA20752.hp1 NA20905.hp1	intron_variant	MODIFIER	c.1376-154G>T c.1376-154G>T	CDK16	ENSG00000102225.17	transcript	ENST00000357227.9	protein_coding	14/15		chrX	47228413
chrX:47228557	C C	T T	1	a0001c0001t0001g0058 a0001c0001t0001g0058	1	HG03669.hp1 HG03669.hp1	intron_variant	MODIFIER	c.1376-10C>T c.1376-10C>T	CDK16	ENSG00000102225.17	transcript	ENST00000357227.9	protein_coding	14/15		chrX	47228557

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JoGo Online Haplotype Explorer CDK16_chrX_47213681_47234997

JoGo Local Haplotype Explorer (on iGV) CDK16_chrX_47213681_47234997

Translation Multiple Alignment View

🧬 Gene Summary (with MANE)

AAmino acid(protein) Level Haplotype Info (Total: 6)

CCoding Level Haplotype Info (Total: 7)

TTranscript Level Haplotype Info (Total: 21)

GGenebody Level Haplotype Info (Total: 92)

A C AC Level (Amino Acid + Coding) Haplotype Info (Total: 7)

A C T ACT Level (Amino Acid + Coding + Transcript) Haplotype Info (Total: 26)

A C T G ACTG Level (Amino Acid + Coding + Transcript + Genebody) Haplotype Info (Total: 113)

Haplotype Details by Sample (Haploid Level) (Total: 312)

AAmino acid(protein) Level Haplotype Related Variants (Effect to Protein Coding Variants) (Total: 10)

CCoding Level Variants (On coding region but no effect to protein coding variants: Synonymous Mutations) (Total: 1)

TTranscript Level Haplotype Variants (Exon) (Total: 23)

GGenebody Level Haplotype Variants (Intron) (Total: 74)

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Annotation (Repeats)

Annotation (SNP Array)