Joint Open Genome and Omics Platform (JoGo)

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geneid	1376
ensemblid	ENSG00000157184.7
hgncid	2330
symbol	CPT2
name	carnitine palmitoyltransferase 2
refseq_nuc	NM_000098.3
refseq_prot	NP_000089.1
ensembl_nuc	ENST00000371486.4
ensembl_prot	ENSP00000360541.3
mane_status	MANE Select
chr	chr1
start	53196824
end	53214197
strand	+
ver	v1.2
region	chr1:53196824-53214197
region5000	chr1:53191824-53219197
regionname0	CPT2_chr1_53196824_53214197
regionname5000	CPT2_chr1_53191824_53219197

ahapid	grch38/ chm13v2	alen	total	AFR	AMR	EAS	EUR	SAS	JPT	regionname	genename	aa	chr	start	end
a0001	1/0	658	217	80	42	58	7	29	48	CPT2_chr1_53191824_53219197	CPT2	copy fasta	chr1	53191824	53219197
a0002	0/1	658	85	7	12	57	4	4	48	CPT2_chr1_53191824_53219197	CPT2	copy fasta	chr1	53191824	53219197
a0003	0/0	658	40	1	3	36	0	0	31	CPT2_chr1_53191824_53219197	CPT2	copy fasta	chr1	53191824	53219197
a0004	0/0	658	34	2	7	22	0	3	16	CPT2_chr1_53191824_53219197	CPT2	copy fasta	chr1	53191824	53219197
a0005	0/0	658	2	2	0	0	0	0	0	CPT2_chr1_53191824_53219197	CPT2	copy fasta	chr1	53191824	53219197
a0006	0/0	658	2	0	2	0	0	0	0	CPT2_chr1_53191824_53219197	CPT2	copy fasta	chr1	53191824	53219197
a0007	0/0	648	1	1	0	0	0	0	0	CPT2_chr1_53191824_53219197	CPT2	copy fasta	chr1	53191824	53219197
a0008	0/0	658	1	0	1	0	0	0	0	CPT2_chr1_53191824_53219197	CPT2	copy fasta	chr1	53191824	53219197
a0009	0/0	658	1	0	0	1	0	0	1	CPT2_chr1_53191824_53219197	CPT2	copy fasta	chr1	53191824	53219197
a0010	0/0	658	1	0	0	0	1	0	0	CPT2_chr1_53191824_53219197	CPT2	copy fasta	chr1	53191824	53219197
a0011	0/0	658	1	0	1	0	0	0	0	CPT2_chr1_53191824_53219197	CPT2	copy fasta	chr1	53191824	53219197
a0012	0/0	658	1	1	0	0	0	0	0	CPT2_chr1_53191824_53219197	CPT2	copy fasta	chr1	53191824	53219197

chapid	grch38/ chm13v2	clen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	cseq	chr	start	end
c0001	1/0	1977	200	66	39	58	7	29	CPT2_chr1_53191824_53219197	CPT2	copy fasta	chr1	53191824	53219197
c0002	0/1	1977	80	7	12	52	4	4	CPT2_chr1_53191824_53219197	CPT2	copy fasta	chr1	53191824	53219197
c0003	0/0	1977	40	1	3	36	0	0	CPT2_chr1_53191824_53219197	CPT2	copy fasta	chr1	53191824	53219197
c0004	0/0	1977	34	2	7	22	0	3	CPT2_chr1_53191824_53219197	CPT2	copy fasta	chr1	53191824	53219197
c0005	0/0	1977	11	8	3	0	0	0	CPT2_chr1_53191824_53219197	CPT2	copy fasta	chr1	53191824	53219197
c0006	0/0	1977	6	6	0	0	0	0	CPT2_chr1_53191824_53219197	CPT2	copy fasta	chr1	53191824	53219197
c0007	0/0	1977	3	0	0	3	0	0	CPT2_chr1_53191824_53219197	CPT2	copy fasta	chr1	53191824	53219197
c0008	0/0	1977	2	2	0	0	0	0	CPT2_chr1_53191824_53219197	CPT2	copy fasta	chr1	53191824	53219197
c0009	0/0	1977	2	0	2	0	0	0	CPT2_chr1_53191824_53219197	CPT2	copy fasta	chr1	53191824	53219197
c0010	0/0	1977	1	0	0	1	0	0	CPT2_chr1_53191824_53219197	CPT2	copy fasta	chr1	53191824	53219197
c0011	0/0	1977	1	0	0	0	1	0	CPT2_chr1_53191824_53219197	CPT2	copy fasta	chr1	53191824	53219197
c0012	0/0	1977	1	0	1	0	0	0	CPT2_chr1_53191824_53219197	CPT2	copy fasta	chr1	53191824	53219197
c0013	0/0	1977	1	0	0	1	0	0	CPT2_chr1_53191824_53219197	CPT2	copy fasta	chr1	53191824	53219197
c0014	0/0	1947	1	1	0	0	0	0	CPT2_chr1_53191824_53219197	CPT2	copy fasta	chr1	53191824	53219197
c0015	0/0	1977	1	0	1	0	0	0	CPT2_chr1_53191824_53219197	CPT2	copy fasta	chr1	53191824	53219197
c0016	0/0	1977	1	1	0	0	0	0	CPT2_chr1_53191824_53219197	CPT2	copy fasta	chr1	53191824	53219197
c0017	0/0	1977	1	0	0	1	0	0	CPT2_chr1_53191824_53219197	CPT2	copy fasta	chr1	53191824	53219197

thapid	grch38 chm13v2	tlen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	tseq	chr	start	end
t0001	1/1	723	386	94	68	174	12	36	CPT2_chr1_53191824_53219197	CPT2	copy fasta	chr1	53191824	53219197

ghapid	grch38/ chm13v2	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	chr	start	end
g0001	0/1	53	2	11	33	2	4	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
g0002	0/0	40	1	13	11	5	10	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
g0003	0/0	31	0	10	16	0	5	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
g0004	0/0	24	11	6	4	0	3	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
g0005	0/0	21	0	3	18	0	0	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
g0006	0/0	17	14	3	0	0	0	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
g0007	0/0	16	0	3	10	0	3	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
g0008	0/0	12	11	1	0	0	0	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
g0009	0/0	9	0	0	9	0	0	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
g0010	0/0	7	6	1	0	0	0	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
g0011	0/0	6	6	0	0	0	0	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
g0012	0/0	6	0	0	6	0	0	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
g0013	0/0	5	4	1	0	0	0	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
g0014	0/0	5	0	0	5	0	0	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
g0015	0/0	4	0	0	4	0	0	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
g0016	0/0	4	0	0	4	0	0	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
g0017	0/0	3	3	0	0	0	0	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
g0018	0/0	3	2	1	0	0	0	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
g0019	0/0	3	3	0	0	0	0	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
g0020	0/0	3	3	0	0	0	0	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
g0021	0/0	3	0	0	2	0	1	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
g0022	0/0	3	0	0	3	0	0	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
g0023	0/0	3	0	1	2	0	0	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
g0024	0/0	3	0	0	3	0	0	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
g0025	0/0	2	0	2	0	0	0	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
g0026	0/0	2	0	0	2	0	0	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
g0027	0/0	2	0	0	2	0	0	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
g0028	0/0	2	2	0	0	0	0	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
g0029	0/0	2	0	0	0	0	2	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
g0030	0/0	2	0	0	2	0	0	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
g0031	0/0	2	2	0	0	0	0	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
g0032	0/0	2	0	0	2	0	0	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
g0033	0/0	2	0	0	2	0	0	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
g0034	0/0	2	0	0	2	0	0	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
g0035	0/0	2	0	0	2	0	0	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
g0036	0/0	2	0	1	0	1	0	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
g0037	0/0	1	0	1	0	0	0	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
g0038	0/0	1	1	0	0	0	0	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
g0039	0/0	1	0	1	0	0	0	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
g0040	0/0	1	0	1	0	0	0	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
g0041	0/0	1	0	0	1	0	0	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
g0042	0/0	1	1	0	0	0	0	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
g0043	0/0	1	0	0	0	0	1	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
g0044	0/0	1	0	0	1	0	0	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
g0045	0/0	1	1	0	0	0	0	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
g0046	0/0	1	0	0	0	0	1	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
g0047	0/0	1	0	1	0	0	0	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
g0048	0/0	1	1	0	0	0	0	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
g0049	0/0	1	1	0	0	0	0	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
g0050	0/0	1	1	0	0	0	0	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
g0051	0/0	1	0	0	1	0	0	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
g0052	0/0	1	0	0	0	0	1	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
g0053	0/0	1	0	0	0	0	1	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
g0054	0/0	1	0	0	1	0	0	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
g0055	0/0	1	0	0	1	0	0	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
g0056	0/0	1	1	0	0	0	0	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
g0057	0/0	1	1	0	0	0	0	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
g0058	0/0	1	0	1	0	0	0	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
g0059	0/0	1	0	1	0	0	0	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
g0060	0/0	1	1	0	0	0	0	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
g0061	0/0	1	1	0	0	0	0	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
g0062	0/0	1	0	0	0	0	1	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
g0063	0/0	1	0	0	1	0	0	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
g0064	0/0	1	1	0	0	0	0	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
g0065	0/0	1	0	0	0	1	0	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
g0066	0/0	1	0	0	0	1	0	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
g0067	0/0	1	0	1	0	0	0	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
g0068	0/0	1	1	0	0	0	0	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
g0069	0/0	1	1	0	0	0	0	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
g0070	0/0	1	0	0	0	0	1	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
g0071	0/0	1	0	1	0	0	0	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
g0072	0/0	1	1	0	0	0	0	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
g0073	0/0	1	0	1	0	0	0	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
g0074	0/0	1	0	0	0	0	1	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
g0075	0/0	1	1	0	0	0	0	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
g0076	0/0	1	1	0	0	0	0	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
g0077	0/0	1	0	0	1	0	0	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
g0078	0/0	1	1	0	0	0	0	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
g0079	0/0	1	1	0	0	0	0	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
g0080	0/0	1	1	0	0	0	0	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
g0081	0/0	1	0	0	1	0	0	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
g0082	0/0	1	0	0	1	0	0	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
g0083	0/0	1	0	0	1	0	0	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
g0084	0/0	1	1	0	0	0	0	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
g0085	0/0	1	0	0	1	0	0	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
g0086	0/0	1	0	0	1	0	0	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
g0087	0/0	1	0	0	1	0	0	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
g0088	0/0	1	0	0	1	0	0	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
g0089	0/0	1	0	0	1	0	0	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
g0090	0/0	1	0	0	1	0	0	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
g0091	0/0	1	1	0	0	0	0	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
g0092	0/0	1	1	0	0	0	0	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
g0093	0/0	1	0	0	1	0	0	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
g0094	0/0	1	0	1	0	0	0	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
g0095	1/0	1	0	0	0	0	0	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
g0096	0/0	1	0	0	1	0	0	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
g0097	0/0	1	1	0	0	0	0	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
g0098	0/0	1	0	0	0	0	1	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
g0099	0/0	1	0	0	1	0	0	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
g0100	0/0	1	0	0	1	0	0	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
g0101	0/0	1	0	0	1	0	0	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
g0102	0/0	1	0	0	1	0	0	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
g0103	0/0	1	1	0	0	0	0	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
g0104	0/0	1	0	0	1	0	0	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
g0105	0/0	1	0	0	1	0	0	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
g0106	0/0	1	0	0	1	0	0	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
g0107	0/0	1	0	0	1	0	0	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
g0108	0/0	1	0	0	0	1	0	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
g0109	0/0	1	0	0	1	0	0	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
g0110	0/0	1	0	0	0	1	0	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
g0111	0/0	1	0	1	0	0	0	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
g0112	0/0	1	0	0	1	0	0	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
g0113	0/0	1	0	0	1	0	0	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
g0114	0/0	1	0	0	1	0	0	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197

achapid	grch38/ chm13v2	clen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	cseq	chr	start	end
a0001c0001	1/0	1977	200	66	39	58	7	29	CPT2_chr1_53191824_53219197	CPT2	copy fasta	chr1	53191824	53219197
a0001c0005	0/0	1977	11	8	3	0	0	0	CPT2_chr1_53191824_53219197	CPT2	copy fasta	chr1	53191824	53219197
a0001c0006	0/0	1977	6	6	0	0	0	0	CPT2_chr1_53191824_53219197	CPT2	copy fasta	chr1	53191824	53219197
a0002c0002	0/1	1977	80	7	12	52	4	4	CPT2_chr1_53191824_53219197	CPT2	copy fasta	chr1	53191824	53219197
a0002c0007	0/0	1977	3	0	0	3	0	0	CPT2_chr1_53191824_53219197	CPT2	copy fasta	chr1	53191824	53219197
a0002c0010	0/0	1977	1	0	0	1	0	0	CPT2_chr1_53191824_53219197	CPT2	copy fasta	chr1	53191824	53219197
a0002c0017	0/0	1977	1	0	0	1	0	0	CPT2_chr1_53191824_53219197	CPT2	copy fasta	chr1	53191824	53219197
a0003c0003	0/0	1977	40	1	3	36	0	0	CPT2_chr1_53191824_53219197	CPT2	copy fasta	chr1	53191824	53219197
a0004c0004	0/0	1977	34	2	7	22	0	3	CPT2_chr1_53191824_53219197	CPT2	copy fasta	chr1	53191824	53219197
a0005c0008	0/0	1977	2	2	0	0	0	0	CPT2_chr1_53191824_53219197	CPT2	copy fasta	chr1	53191824	53219197
a0006c0009	0/0	1977	2	0	2	0	0	0	CPT2_chr1_53191824_53219197	CPT2	copy fasta	chr1	53191824	53219197
a0007c0014	0/0	1947	1	1	0	0	0	0	CPT2_chr1_53191824_53219197	CPT2	copy fasta	chr1	53191824	53219197
a0008c0012	0/0	1977	1	0	1	0	0	0	CPT2_chr1_53191824_53219197	CPT2	copy fasta	chr1	53191824	53219197
a0009c0013	0/0	1977	1	0	0	1	0	0	CPT2_chr1_53191824_53219197	CPT2	copy fasta	chr1	53191824	53219197
a0010c0011	0/0	1977	1	0	0	0	1	0	CPT2_chr1_53191824_53219197	CPT2	copy fasta	chr1	53191824	53219197
a0011c0015	0/0	1977	1	0	1	0	0	0	CPT2_chr1_53191824_53219197	CPT2	copy fasta	chr1	53191824	53219197
a0012c0016	0/0	1977	1	1	0	0	0	0	CPT2_chr1_53191824_53219197	CPT2	copy fasta	chr1	53191824	53219197

acthapid	grch38 chm13v2	tlen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	tseq	chr	start	end
a0001c0001t0001	1/0	2699	200	66	39	58	7	29	CPT2_chr1_53191824_53219197	CPT2	copy fasta	chr1	53191824	53219197
a0001c0005t0001	0/0	2699	11	8	3	0	0	0	CPT2_chr1_53191824_53219197	CPT2	copy fasta	chr1	53191824	53219197
a0001c0006t0001	0/0	2699	6	6	0	0	0	0	CPT2_chr1_53191824_53219197	CPT2	copy fasta	chr1	53191824	53219197
a0002c0002t0001	0/1	2699	80	7	12	52	4	4	CPT2_chr1_53191824_53219197	CPT2	copy fasta	chr1	53191824	53219197
a0002c0007t0001	0/0	2699	3	0	0	3	0	0	CPT2_chr1_53191824_53219197	CPT2	copy fasta	chr1	53191824	53219197
a0002c0010t0001	0/0	2699	1	0	0	1	0	0	CPT2_chr1_53191824_53219197	CPT2	copy fasta	chr1	53191824	53219197
a0002c0017t0001	0/0	2699	1	0	0	1	0	0	CPT2_chr1_53191824_53219197	CPT2	copy fasta	chr1	53191824	53219197
a0003c0003t0001	0/0	2699	40	1	3	36	0	0	CPT2_chr1_53191824_53219197	CPT2	copy fasta	chr1	53191824	53219197
a0004c0004t0001	0/0	2699	34	2	7	22	0	3	CPT2_chr1_53191824_53219197	CPT2	copy fasta	chr1	53191824	53219197
a0005c0008t0001	0/0	2699	2	2	0	0	0	0	CPT2_chr1_53191824_53219197	CPT2	copy fasta	chr1	53191824	53219197
a0006c0009t0001	0/0	2699	2	0	2	0	0	0	CPT2_chr1_53191824_53219197	CPT2	copy fasta	chr1	53191824	53219197
a0007c0014t0001	0/0	2669	1	1	0	0	0	0	CPT2_chr1_53191824_53219197	CPT2	copy fasta	chr1	53191824	53219197
a0008c0012t0001	0/0	2699	1	0	1	0	0	0	CPT2_chr1_53191824_53219197	CPT2	copy fasta	chr1	53191824	53219197
a0009c0013t0001	0/0	2699	1	0	0	1	0	0	CPT2_chr1_53191824_53219197	CPT2	copy fasta	chr1	53191824	53219197
a0010c0011t0001	0/0	2699	1	0	0	0	1	0	CPT2_chr1_53191824_53219197	CPT2	copy fasta	chr1	53191824	53219197
a0011c0015t0001	0/0	2699	1	0	1	0	0	0	CPT2_chr1_53191824_53219197	CPT2	copy fasta	chr1	53191824	53219197
a0012c0016t0001	0/0	2699	1	1	0	0	0	0	CPT2_chr1_53191824_53219197	CPT2	copy fasta	chr1	53191824	53219197

actghapid	grch38/ chm13v2	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	chr	start	end
a0001c0001t0001g0002	0/0	40	1	13	11	5	10	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
a0001c0001t0001g0003	0/0	31	0	10	16	0	5	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
a0001c0001t0001g0004	0/0	18	6	5	4	0	3	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
a0001c0001t0001g0006	0/0	8	7	1	0	0	0	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
a0001c0001t0001g0008	0/0	12	11	1	0	0	0	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
a0001c0001t0001g0009	0/0	9	0	0	9	0	0	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
a0001c0001t0001g0010	0/0	7	6	1	0	0	0	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
a0001c0001t0001g0011	0/0	6	6	0	0	0	0	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
a0001c0001t0001g0013	0/0	5	4	1	0	0	0	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
a0001c0001t0001g0015	0/0	4	0	0	4	0	0	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
a0001c0001t0001g0017	0/0	3	3	0	0	0	0	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
a0001c0001t0001g0018	0/0	3	2	1	0	0	0	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
a0001c0001t0001g0020	0/0	3	3	0	0	0	0	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
a0001c0001t0001g0021	0/0	3	0	0	2	0	1	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
a0001c0001t0001g0026	0/0	2	0	0	2	0	0	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
a0001c0001t0001g0027	0/0	2	0	0	2	0	0	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
a0001c0001t0001g0028	0/0	2	2	0	0	0	0	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
a0001c0001t0001g0029	0/0	2	0	0	0	0	2	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
a0001c0001t0001g0030	0/0	2	0	0	2	0	0	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
a0001c0001t0001g0042	0/0	1	1	0	0	0	0	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
a0001c0001t0001g0043	0/0	1	0	0	0	0	1	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
a0001c0001t0001g0044	0/0	1	0	0	1	0	0	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
a0001c0001t0001g0045	0/0	1	1	0	0	0	0	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
a0001c0001t0001g0046	0/0	1	0	0	0	0	1	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
a0001c0001t0001g0047	0/0	1	0	1	0	0	0	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
a0001c0001t0001g0048	0/0	1	1	0	0	0	0	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
a0001c0001t0001g0049	0/0	1	1	0	0	0	0	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
a0001c0001t0001g0050	0/0	1	1	0	0	0	0	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
a0001c0001t0001g0051	0/0	1	0	0	1	0	0	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
a0001c0001t0001g0052	0/0	1	0	0	0	0	1	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
a0001c0001t0001g0053	0/0	1	0	0	0	0	1	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
a0001c0001t0001g0054	0/0	1	0	0	1	0	0	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
a0001c0001t0001g0055	0/0	1	0	0	1	0	0	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
a0001c0001t0001g0056	0/0	1	1	0	0	0	0	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
a0001c0001t0001g0057	0/0	1	1	0	0	0	0	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
a0001c0001t0001g0058	0/0	1	0	1	0	0	0	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
a0001c0001t0001g0059	0/0	1	0	1	0	0	0	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
a0001c0001t0001g0060	0/0	1	1	0	0	0	0	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
a0001c0001t0001g0062	0/0	1	0	0	0	0	1	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
a0001c0001t0001g0063	0/0	1	0	0	1	0	0	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
a0001c0001t0001g0064	0/0	1	1	0	0	0	0	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
a0001c0001t0001g0065	0/0	1	0	0	0	1	0	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
a0001c0001t0001g0066	0/0	1	0	0	0	1	0	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
a0001c0001t0001g0067	0/0	1	0	1	0	0	0	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
a0001c0001t0001g0068	0/0	1	1	0	0	0	0	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
a0001c0001t0001g0069	0/0	1	1	0	0	0	0	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
a0001c0001t0001g0070	0/0	1	0	0	0	0	1	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
a0001c0001t0001g0071	0/0	1	0	1	0	0	0	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
a0001c0001t0001g0073	0/0	1	0	1	0	0	0	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
a0001c0001t0001g0074	0/0	1	0	0	0	0	1	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
a0001c0001t0001g0075	0/0	1	1	0	0	0	0	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
a0001c0001t0001g0091	0/0	1	1	0	0	0	0	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
a0001c0001t0001g0092	0/0	1	1	0	0	0	0	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
a0001c0001t0001g0095	1/0	1	0	0	0	0	0	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
a0001c0001t0001g0096	0/0	1	0	0	1	0	0	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
a0001c0001t0001g0098	0/0	1	0	0	0	0	1	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
a0001c0001t0001g0103	0/0	1	1	0	0	0	0	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
a0001c0005t0001g0006	0/0	9	7	2	0	0	0	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
a0001c0005t0001g0094	0/0	1	0	1	0	0	0	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
a0001c0005t0001g0097	0/0	1	1	0	0	0	0	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
a0001c0006t0001g0004	0/0	5	5	0	0	0	0	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
a0001c0006t0001g0072	0/0	1	1	0	0	0	0	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
a0002c0002t0001g0001	0/1	45	2	10	27	1	4	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
a0002c0002t0001g0014	0/0	5	0	0	5	0	0	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
a0002c0002t0001g0019	0/0	2	2	0	0	0	0	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
a0002c0002t0001g0022	0/0	3	0	0	3	0	0	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
a0002c0002t0001g0023	0/0	2	0	0	2	0	0	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
a0002c0002t0001g0024	0/0	3	0	0	3	0	0	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
a0002c0002t0001g0034	0/0	2	0	0	2	0	0	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
a0002c0002t0001g0035	0/0	2	0	0	2	0	0	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
a0002c0002t0001g0036	0/0	2	0	1	0	1	0	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
a0002c0002t0001g0076	0/0	1	1	0	0	0	0	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
a0002c0002t0001g0080	0/0	1	1	0	0	0	0	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
a0002c0002t0001g0084	0/0	1	1	0	0	0	0	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
a0002c0002t0001g0104	0/0	1	0	0	1	0	0	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
a0002c0002t0001g0105	0/0	1	0	0	1	0	0	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
a0002c0002t0001g0106	0/0	1	0	0	1	0	0	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
a0002c0002t0001g0107	0/0	1	0	0	1	0	0	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
a0002c0002t0001g0108	0/0	1	0	0	0	1	0	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
a0002c0002t0001g0109	0/0	1	0	0	1	0	0	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
a0002c0002t0001g0110	0/0	1	0	0	0	1	0	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
a0002c0002t0001g0111	0/0	1	0	1	0	0	0	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
a0002c0002t0001g0112	0/0	1	0	0	1	0	0	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
a0002c0002t0001g0113	0/0	1	0	0	1	0	0	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
a0002c0002t0001g0114	0/0	1	0	0	1	0	0	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
a0002c0007t0001g0001	0/0	3	0	0	3	0	0	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
a0002c0010t0001g0001	0/0	1	0	0	1	0	0	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
a0002c0017t0001g0001	0/0	1	0	0	1	0	0	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
a0003c0003t0001g0005	0/0	21	0	3	18	0	0	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
a0003c0003t0001g0012	0/0	6	0	0	6	0	0	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
a0003c0003t0001g0032	0/0	2	0	0	2	0	0	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
a0003c0003t0001g0033	0/0	2	0	0	2	0	0	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
a0003c0003t0001g0061	0/0	1	1	0	0	0	0	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
a0003c0003t0001g0082	0/0	1	0	0	1	0	0	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
a0003c0003t0001g0083	0/0	1	0	0	1	0	0	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
a0003c0003t0001g0085	0/0	1	0	0	1	0	0	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
a0003c0003t0001g0086	0/0	1	0	0	1	0	0	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
a0003c0003t0001g0087	0/0	1	0	0	1	0	0	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
a0003c0003t0001g0088	0/0	1	0	0	1	0	0	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
a0003c0003t0001g0089	0/0	1	0	0	1	0	0	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
a0003c0003t0001g0090	0/0	1	0	0	1	0	0	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
a0004c0004t0001g0007	0/0	16	0	3	10	0	3	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
a0004c0004t0001g0016	0/0	4	0	0	4	0	0	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
a0004c0004t0001g0025	0/0	1	0	1	0	0	0	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
a0004c0004t0001g0037	0/0	1	0	1	0	0	0	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
a0004c0004t0001g0038	0/0	1	1	0	0	0	0	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
a0004c0004t0001g0039	0/0	1	0	1	0	0	0	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
a0004c0004t0001g0040	0/0	1	0	1	0	0	0	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
a0004c0004t0001g0041	0/0	1	0	0	1	0	0	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
a0004c0004t0001g0077	0/0	1	0	0	1	0	0	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
a0004c0004t0001g0079	0/0	1	1	0	0	0	0	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
a0004c0004t0001g0081	0/0	1	0	0	1	0	0	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
a0004c0004t0001g0093	0/0	1	0	0	1	0	0	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
a0004c0004t0001g0099	0/0	1	0	0	1	0	0	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
a0004c0004t0001g0100	0/0	1	0	0	1	0	0	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
a0004c0004t0001g0101	0/0	1	0	0	1	0	0	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
a0004c0004t0001g0102	0/0	1	0	0	1	0	0	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
a0005c0008t0001g0031	0/0	2	2	0	0	0	0	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
a0006c0009t0001g0001	0/0	1	0	1	0	0	0	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
a0006c0009t0001g0023	0/0	1	0	1	0	0	0	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
a0007c0014t0001g0078	0/0	1	1	0	0	0	0	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
a0008c0012t0001g0025	0/0	1	0	1	0	0	0	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
a0009c0013t0001g0001	0/0	1	0	0	1	0	0	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
a0010c0011t0001g0001	0/0	1	0	0	0	1	0	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
a0011c0015t0001g0004	0/0	1	0	1	0	0	0	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
a0012c0016t0001g0019	0/0	1	1	0	0	0	0	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197

sampleid	ID haplotypeid	ahapid	chapid	thapid	ghapid	gpopname	popname	regionname	genename	chr	start	end
HG00140	hp1	a0001	c0001	t0001	g0002	EUR	GBR	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
HG00140	hp2	a0002	c0002	t0001	g0001	EUR	GBR	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
HG00323	hp1	a0002	c0002	t0001	g0110	EUR	FIN	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
HG00323	hp2	a0002	c0002	t0001	g0108	EUR	FIN	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
HG00408	hp1	a0001	c0001	t0001	g0002	EAS	CHS	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
HG00408	hp2	a0004	c0004	t0001	g0099	EAS	CHS	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
HG00438	hp1	a0002	c0002	t0001	g0001	EAS	CHS	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
HG00438	hp2	a0004	c0004	t0001	g0007	EAS	CHS	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
HG00544	hp1	a0001	c0001	t0001	g0044	EAS	CHS	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
HG00544	hp2	a0004	c0004	t0001	g0081	EAS	CHS	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
HG00558	hp1	a0004	c0004	t0001	g0101	EAS	CHS	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
HG00558	hp2	a0002	c0002	t0001	g0001	EAS	CHS	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
HG00597	hp1	a0001	c0001	t0001	g0002	EAS	CHS	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
HG00597	hp2	a0002	c0002	t0001	g0001	EAS	CHS	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
HG00639	hp1	a0001	c0001	t0001	g0002	AMR	PUR	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
HG00639	hp2	a0011	c0015	t0001	g0004	AMR	PUR	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
HG00642	hp1	a0001	c0001	t0001	g0010	AMR	PUR	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
HG00642	hp2	a0001	c0005	t0001	g0094	AMR	PUR	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
HG00735	hp1	a0001	c0001	t0001	g0004	AMR	PUR	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
HG00735	hp2	a0001	c0005	t0001	g0006	AMR	PUR	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
HG00738	hp1	a0001	c0001	t0001	g0059	AMR	PUR	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
HG00738	hp2	a0001	c0001	t0001	g0002	AMR	PUR	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
HG00741	hp1	a0001	c0001	t0001	g0004	AMR	PUR	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
HG00741	hp2	a0003	c0003	t0001	g0005	AMR	PUR	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
HG01070	hp1	a0001	c0001	t0001	g0002	AMR	PUR	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
HG01070	hp2	a0002	c0002	t0001	g0001	AMR	PUR	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
HG01071	hp1	a0002	c0002	t0001	g0001	AMR	PUR	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
HG01071	hp2	a0001	c0001	t0001	g0002	AMR	PUR	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
HG01074	hp1	a0001	c0001	t0001	g0002	AMR	PUR	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
HG01074	hp2	a0001	c0001	t0001	g0004	AMR	PUR	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
HG01081	hp1	a0002	c0002	t0001	g0001	AMR	PUR	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
HG01081	hp2	a0004	c0004	t0001	g0037	AMR	PUR	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
HG01099	hp1	a0001	c0001	t0001	g0003	AMR	PUR	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
HG01099	hp2	a0006	c0009	t0001	g0023	AMR	PUR	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
HG01106	hp1	a0001	c0001	t0001	g0002	AMR	PUR	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
HG01106	hp2	a0004	c0004	t0001	g0007	AMR	PUR	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
HG01167	hp1	a0004	c0004	t0001	g0007	AMR	PUR	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
HG01167	hp2	a0001	c0001	t0001	g0067	AMR	PUR	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
HG01168	hp1	a0001	c0001	t0001	g0018	AMR	PUR	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
HG01168	hp2	a0004	c0004	t0001	g0040	AMR	PUR	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
HG01169	hp1	a0001	c0001	t0001	g0073	AMR	PUR	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
HG01169	hp2	a0004	c0004	t0001	g0039	AMR	PUR	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
HG01175	hp1	a0002	c0002	t0001	g0001	AMR	PUR	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
HG01175	hp2	a0001	c0001	t0001	g0006	AMR	PUR	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
HG01192	hp1	a0001	c0001	t0001	g0004	AMR	PUR	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
HG01192	hp2	a0001	c0005	t0001	g0006	AMR	PUR	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
HG01243	hp1	a0001	c0001	t0001	g0008	AMR	PUR	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
HG01243	hp2	a0002	c0002	t0001	g0001	AMR	PUR	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
HG01255	hp1	a0003	c0003	t0001	g0005	AMR	CLM	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
HG01255	hp2	a0002	c0002	t0001	g0001	AMR	CLM	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
HG01258	hp1	a0001	c0001	t0001	g0002	AMR	CLM	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
HG01258	hp2	a0002	c0002	t0001	g0001	AMR	CLM	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
HG01346	hp1	a0008	c0012	t0001	g0025	AMR	CLM	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
HG01346	hp2	a0002	c0002	t0001	g0036	AMR	CLM	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
HG01358	hp1	a0006	c0009	t0001	g0001	AMR	CLM	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
HG01358	hp2	a0004	c0004	t0001	g0007	AMR	CLM	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
HG01361	hp1	a0001	c0001	t0001	g0002	AMR	CLM	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
HG01361	hp2	a0002	c0002	t0001	g0001	AMR	CLM	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
HG01433	hp1	a0001	c0001	t0001	g0002	AMR	CLM	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
HG01433	hp2	a0001	c0001	t0001	g0071	AMR	CLM	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
HG01515	hp1	a0001	c0001	t0001	g0002	EUR	IBS	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
HG01515	hp2	a0002	c0002	t0001	g0036	EUR	IBS	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
HG01516	hp1	a0001	c0001	t0001	g0065	EUR	IBS	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
HG01516	hp2	a0001	c0001	t0001	g0066	EUR	IBS	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
HG01517	hp1	a0001	c0001	t0001	g0002	EUR	IBS	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
HG01517	hp2	a0001	c0001	t0001	g0002	EUR	IBS	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
HG01884	hp1	a0001	c0001	t0001	g0045	AFR	ACB	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
HG01884	hp2	a0001	c0001	t0001	g0010	AFR	ACB	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
HG01891	hp1	a0001	c0001	t0001	g0008	AFR	ACB	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
HG01891	hp2	a0001	c0001	t0001	g0006	AFR	ACB	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
HG01943	hp1	a0001	c0001	t0001	g0002	AMR	PEL	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
HG01943	hp2	a0001	c0001	t0001	g0013	AMR	PEL	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
HG01952	hp1	a0001	c0001	t0001	g0002	AMR	PEL	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
HG01952	hp2	a0001	c0001	t0001	g0003	AMR	PEL	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
HG01975	hp1	a0001	c0001	t0001	g0002	AMR	PEL	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
HG01975	hp2	a0003	c0003	t0001	g0005	AMR	PEL	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
HG01981	hp1	a0001	c0001	t0001	g0003	AMR	PEL	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
HG01981	hp2	a0001	c0001	t0001	g0058	AMR	PEL	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
HG01993	hp1	a0001	c0001	t0001	g0003	AMR	PEL	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
HG01993	hp2	a0001	c0001	t0001	g0004	AMR	PEL	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
HG02004	hp1	a0001	c0001	t0001	g0003	AMR	PEL	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
HG02004	hp2	a0001	c0001	t0001	g0002	AMR	PEL	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
HG02015	hp1	a0002	c0002	t0001	g0001	EAS	KHV	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
HG02015	hp2	a0004	c0004	t0001	g0007	EAS	KHV	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
HG02027	hp1	a0001	c0001	t0001	g0004	EAS	KHV	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
HG02027	hp2	a0003	c0003	t0001	g0005	EAS	KHV	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
HG02040	hp1	a0002	c0002	t0001	g0001	EAS	KHV	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
HG02040	hp2	a0001	c0001	t0001	g0021	EAS	KHV	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
HG02055	hp1	a0012	c0016	t0001	g0019	AFR	ACB	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
HG02055	hp2	a0001	c0001	t0001	g0068	AFR	ACB	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
HG02071	hp1	a0003	c0003	t0001	g0085	EAS	KHV	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
HG02071	hp2	a0001	c0001	t0001	g0004	EAS	KHV	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
HG02074	hp1	a0001	c0001	t0001	g0003	EAS	KHV	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
HG02074	hp2	a0003	c0003	t0001	g0012	EAS	KHV	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
HG02080	hp1	a0002	c0002	t0001	g0001	EAS	KHV	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
HG02080	hp2	a0001	c0001	t0001	g0003	EAS	KHV	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
HG02083	hp1	a0002	c0002	t0001	g0107	EAS	KHV	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
HG02083	hp2	a0001	c0001	t0001	g0009	EAS	KHV	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
HG02132	hp1	a0002	c0007	t0001	g0001	EAS	KHV	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
HG02132	hp2	a0003	c0003	t0001	g0005	EAS	KHV	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
HG02145	hp1	a0001	c0001	t0001	g0006	AFR	ACB	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
HG02145	hp2	a0001	c0001	t0001	g0004	AFR	ACB	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
HG02148	hp1	a0001	c0001	t0001	g0003	AMR	PEL	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
HG02148	hp2	a0002	c0002	t0001	g0001	AMR	PEL	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
HG02165	hp1	a0004	c0004	t0001	g0007	EAS	CDX	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
HG02165	hp2	a0002	c0002	t0001	g0014	EAS	CDX	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
HG02257	hp1	a0001	c0006	t0001	g0004	AFR	ACB	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
HG02257	hp2	a0001	c0001	t0001	g0011	AFR	ACB	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
HG02258	hp1	a0001	c0001	t0001	g0069	AFR	ACB	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
HG02258	hp2	a0001	c0001	t0001	g0008	AFR	ACB	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
HG02273	hp1	a0001	c0001	t0001	g0003	AMR	PEL	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
HG02273	hp2	a0002	c0002	t0001	g0001	AMR	PEL	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
HG02280	hp1	a0001	c0001	t0001	g0018	AFR	ACB	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
HG02280	hp2	a0001	c0001	t0001	g0011	AFR	ACB	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
HG02293	hp1	a0001	c0001	t0001	g0003	AMR	PEL	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
HG02293	hp2	a0001	c0001	t0001	g0047	AMR	PEL	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
HG02300	hp1	a0001	c0001	t0001	g0003	AMR	PEL	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
HG02300	hp2	a0004	c0004	t0001	g0025	AMR	PEL	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
HG02451	hp1	a0001	c0005	t0001	g0006	AFR	ACB	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
HG02451	hp2	a0001	c0001	t0001	g0010	AFR	ACB	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
HG02572	hp1	a0001	c0001	t0001	g0010	AFR	GWD	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
HG02572	hp2	a0001	c0001	t0001	g0008	AFR	GWD	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
HG02602	hp1	a0001	c0001	t0001	g0062	SAS	PJL	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
HG02602	hp2	a0001	c0001	t0001	g0074	SAS	PJL	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
HG02615	hp1	a0001	c0001	t0001	g0018	AFR	GWD	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
HG02615	hp2	a0001	c0005	t0001	g0006	AFR	GWD	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
HG02622	hp1	a0001	c0001	t0001	g0091	AFR	GWD	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
HG02622	hp2	a0001	c0001	t0001	g0010	AFR	GWD	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
HG02630	hp1	a0005	c0008	t0001	g0031	AFR	GWD	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
HG02630	hp2	a0001	c0005	t0001	g0006	AFR	GWD	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
HG02647	hp1	a0001	c0001	t0001	g0004	AFR	GWD	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
HG02647	hp2	a0001	c0001	t0001	g0064	AFR	GWD	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
HG02683	hp1	a0001	c0001	t0001	g0003	SAS	PJL	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
HG02683	hp2	a0004	c0004	t0001	g0007	SAS	PJL	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
HG02698	hp1	a0001	c0001	t0001	g0003	SAS	PJL	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
HG02698	hp2	a0001	c0001	t0001	g0002	SAS	PJL	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
HG02717	hp1	a0001	c0001	t0001	g0048	AFR	GWD	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
HG02717	hp2	a0001	c0001	t0001	g0017	AFR	GWD	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
HG02723	hp1	a0001	c0001	t0001	g0013	AFR	GWD	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
HG02723	hp2	a0001	c0005	t0001	g0006	AFR	GWD	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
HG02735	hp1	a0001	c0001	t0001	g0004	SAS	PJL	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
HG02735	hp2	a0001	c0001	t0001	g0029	SAS	PJL	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
HG02738	hp1	a0001	c0001	t0001	g0003	SAS	PJL	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
HG02738	hp2	a0001	c0001	t0001	g0002	SAS	PJL	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
HG02809	hp1	a0001	c0001	t0001	g0008	AFR	GWD	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
HG02809	hp2	a0001	c0001	t0001	g0092	AFR	GWD	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
HG02818	hp1	a0002	c0002	t0001	g0084	AFR	GWD	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
HG02818	hp2	a0004	c0004	t0001	g0079	AFR	GWD	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
HG02895	hp1	a0001	c0001	t0001	g0004	AFR	GWD	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
HG02895	hp2	a0001	c0001	t0001	g0011	AFR	GWD	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
HG02896	hp1	a0001	c0001	t0001	g0008	AFR	GWD	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
HG02896	hp2	a0001	c0006	t0001	g0004	AFR	GWD	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
HG02897	hp1	a0001	c0001	t0001	g0008	AFR	GWD	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
HG02897	hp2	a0001	c0001	t0001	g0011	AFR	GWD	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
HG02922	hp1	a0001	c0001	t0001	g0008	AFR	ESN	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
HG02922	hp2	a0001	c0001	t0001	g0006	AFR	ESN	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
HG02965	hp1	a0001	c0001	t0001	g0010	AFR	ESN	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
HG02965	hp2	a0001	c0001	t0001	g0050	AFR	ESN	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
HG03017	hp1	a0002	c0002	t0001	g0001	SAS	PJL	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
HG03017	hp2	a0001	c0001	t0001	g0002	SAS	PJL	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
HG03041	hp1	a0001	c0006	t0001	g0004	AFR	GWD	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
HG03041	hp2	a0001	c0001	t0001	g0060	AFR	GWD	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
HG03098	hp1	a0002	c0002	t0001	g0080	AFR	MSL	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
HG03098	hp2	a0001	c0005	t0001	g0006	AFR	MSL	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
HG03130	hp1	a0001	c0001	t0001	g0020	AFR	ESN	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
HG03130	hp2	a0001	c0006	t0001	g0072	AFR	ESN	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
HG03139	hp1	a0001	c0001	t0001	g0006	AFR	ESN	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
HG03139	hp2	a0007	c0014	t0001	g0078	AFR	ESN	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
HG03195	hp1	a0002	c0002	t0001	g0001	AFR	ESN	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
HG03195	hp2	a0001	c0001	t0001	g0006	AFR	ESN	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
HG03209	hp1	a0001	c0001	t0001	g0028	AFR	MSL	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
HG03209	hp2	a0001	c0001	t0001	g0004	AFR	MSL	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
HG03225	hp1	a0002	c0002	t0001	g0019	AFR	MSL	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
HG03225	hp2	a0001	c0001	t0001	g0008	AFR	MSL	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
HG03453	hp1	a0001	c0001	t0001	g0103	AFR	MSL	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
HG03453	hp2	a0001	c0001	t0001	g0006	AFR	MSL	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
HG03486	hp1	a0001	c0001	t0001	g0042	AFR	MSL	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
HG03486	hp2	a0001	c0005	t0001	g0006	AFR	MSL	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
HG03492	hp1	a0001	c0001	t0001	g0029	SAS	PJL	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
HG03492	hp2	a0001	c0001	t0001	g0003	SAS	PJL	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
HG03516	hp1	a0001	c0001	t0001	g0008	AFR	ESN	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
HG03516	hp2	a0001	c0001	t0001	g0004	AFR	ESN	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
HG03540	hp1	a0001	c0006	t0001	g0004	AFR	GWD	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
HG03540	hp2	a0001	c0001	t0001	g0013	AFR	GWD	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
HG03579	hp1	a0001	c0001	t0001	g0011	AFR	MSL	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
HG03579	hp2	a0001	c0001	t0001	g0008	AFR	MSL	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
HG03654	hp1	a0001	c0001	t0001	g0052	SAS	PJL	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
HG03654	hp2	a0001	c0001	t0001	g0002	SAS	PJL	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
HG03669	hp1	a0001	c0001	t0001	g0003	SAS	PJL	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
HG03669	hp2	a0001	c0001	t0001	g0002	SAS	PJL	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
HG03688	hp1	a0001	c0001	t0001	g0002	SAS	STU	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
HG03688	hp2	a0001	c0001	t0001	g0098	SAS	STU	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
HG03831	hp1	a0004	c0004	t0001	g0007	SAS	BEB	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
HG03831	hp2	a0002	c0002	t0001	g0001	SAS	BEB	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
HG03834	hp1	a0001	c0001	t0001	g0002	SAS	BEB	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
HG03834	hp2	a0001	c0001	t0001	g0002	SAS	BEB	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
HG03927	hp1	a0002	c0002	t0001	g0001	SAS	BEB	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
HG03927	hp2	a0001	c0001	t0001	g0053	SAS	BEB	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
HG04115	hp1	a0001	c0001	t0001	g0070	SAS	STU	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
HG04115	hp2	a0001	c0001	t0001	g0004	SAS	STU	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
HG04184	hp1	a0001	c0001	t0001	g0046	SAS	BEB	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
HG04184	hp2	a0001	c0001	t0001	g0002	SAS	BEB	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
HG04199	hp1	a0002	c0002	t0001	g0001	SAS	STU	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
HG04199	hp2	a0001	c0001	t0001	g0004	SAS	STU	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
HG04204	hp1	a0001	c0001	t0001	g0002	SAS	STU	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
HG04204	hp2	a0001	c0001	t0001	g0043	SAS	STU	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
HG04228	hp1	a0001	c0001	t0001	g0021	SAS	STU	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
HG04228	hp2	a0004	c0004	t0001	g0007	SAS	STU	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
NA18522	hp1	a0001	c0006	t0001	g0004	AFR	YRI	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
NA18522	hp2	a0001	c0001	t0001	g0020	AFR	YRI	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
NA18612	hp1	a0001	c0001	t0001	g0030	EAS	CHB	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
NA18612	hp2	a0003	c0003	t0001	g0005	EAS	CHB	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
NA18906	hp1	a0001	c0001	t0001	g0017	AFR	YRI	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
NA18906	hp2	a0002	c0002	t0001	g0019	AFR	YRI	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
NA18939	hp1	a0002	c0002	t0001	g0001	EAS	JPT	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
NA18939	hp2	a0001	c0001	t0001	g0009	EAS	JPT	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
NA18941	hp1	a0001	c0001	t0001	g0002	EAS	JPT	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
NA18941	hp2	a0001	c0001	t0001	g0015	EAS	JPT	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
NA18942	hp1	a0001	c0001	t0001	g0096	EAS	JPT	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
NA18942	hp2	a0001	c0001	t0001	g0002	EAS	JPT	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
NA18944	hp1	a0002	c0002	t0001	g0001	EAS	JPT	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
NA18944	hp2	a0002	c0002	t0001	g0001	EAS	JPT	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
NA18945	hp1	a0001	c0001	t0001	g0002	EAS	JPT	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
NA18945	hp2	a0003	c0003	t0001	g0005	EAS	JPT	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
NA18946	hp1	a0001	c0001	t0001	g0002	EAS	JPT	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
NA18946	hp2	a0003	c0003	t0001	g0005	EAS	JPT	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
NA18948	hp1	a0002	c0002	t0001	g0114	EAS	JPT	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
NA18948	hp2	a0002	c0010	t0001	g0001	EAS	JPT	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
NA18949	hp1	a0002	c0002	t0001	g0001	EAS	JPT	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
NA18949	hp2	a0001	c0001	t0001	g0026	EAS	JPT	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
NA18950	hp1	a0003	c0003	t0001	g0032	EAS	JPT	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
NA18950	hp2	a0001	c0001	t0001	g0002	EAS	JPT	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
NA18951	hp1	a0003	c0003	t0001	g0082	EAS	JPT	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
NA18951	hp2	a0002	c0002	t0001	g0014	EAS	JPT	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
NA18953	hp1	a0003	c0003	t0001	g0005	EAS	JPT	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
NA18953	hp2	a0001	c0001	t0001	g0002	EAS	JPT	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
NA18954	hp1	a0001	c0001	t0001	g0027	EAS	JPT	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
NA18954	hp2	a0002	c0002	t0001	g0014	EAS	JPT	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
NA18959	hp1	a0002	c0002	t0001	g0014	EAS	JPT	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
NA18959	hp2	a0001	c0001	t0001	g0003	EAS	JPT	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
NA18960	hp1	a0002	c0002	t0001	g0001	EAS	JPT	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
NA18960	hp2	a0003	c0003	t0001	g0005	EAS	JPT	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
NA18961	hp1	a0002	c0002	t0001	g0022	EAS	JPT	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
NA18961	hp2	a0002	c0002	t0001	g0034	EAS	JPT	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
NA18963	hp1	a0001	c0001	t0001	g0003	EAS	JPT	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
NA18963	hp2	a0004	c0004	t0001	g0041	EAS	JPT	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
NA18965	hp1	a0001	c0001	t0001	g0003	EAS	JPT	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
NA18965	hp2	a0004	c0004	t0001	g0016	EAS	JPT	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
NA18969	hp1	a0002	c0002	t0001	g0001	EAS	JPT	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
NA18969	hp2	a0001	c0001	t0001	g0003	EAS	JPT	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
NA18970	hp1	a0002	c0002	t0001	g0035	EAS	JPT	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
NA18970	hp2	a0004	c0004	t0001	g0016	EAS	JPT	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
NA18971	hp1	a0004	c0004	t0001	g0007	EAS	JPT	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
NA18971	hp2	a0003	c0003	t0001	g0005	EAS	JPT	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
NA18972	hp1	a0004	c0004	t0001	g0016	EAS	JPT	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
NA18972	hp2	a0003	c0003	t0001	g0086	EAS	JPT	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
NA18973	hp1	a0004	c0004	t0001	g0100	EAS	JPT	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
NA18973	hp2	a0002	c0002	t0001	g0035	EAS	JPT	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
NA18977	hp1	a0002	c0002	t0001	g0024	EAS	JPT	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
NA18977	hp2	a0003	c0003	t0001	g0033	EAS	JPT	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
NA18980	hp1	a0001	c0001	t0001	g0009	EAS	JPT	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
NA18980	hp2	a0002	c0002	t0001	g0104	EAS	JPT	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
NA18981	hp1	a0003	c0003	t0001	g0012	EAS	JPT	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
NA18981	hp2	a0002	c0002	t0001	g0024	EAS	JPT	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
NA18982	hp1	a0001	c0001	t0001	g0026	EAS	JPT	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
NA18982	hp2	a0001	c0001	t0001	g0063	EAS	JPT	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
NA18983	hp1	a0001	c0001	t0001	g0003	EAS	JPT	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
NA18983	hp2	a0002	c0002	t0001	g0001	EAS	JPT	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
NA18986	hp1	a0003	c0003	t0001	g0005	EAS	JPT	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
NA18986	hp2	a0002	c0002	t0001	g0105	EAS	JPT	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
NA18988	hp1	a0001	c0001	t0001	g0003	EAS	JPT	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
NA18988	hp2	a0003	c0003	t0001	g0012	EAS	JPT	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
NA18990	hp1	a0002	c0002	t0001	g0001	EAS	JPT	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
NA18990	hp2	a0001	c0001	t0001	g0003	EAS	JPT	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
NA18991	hp1	a0002	c0002	t0001	g0001	EAS	JPT	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
NA18991	hp2	a0001	c0001	t0001	g0015	EAS	JPT	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
NA18992	hp1	a0002	c0002	t0001	g0001	EAS	JPT	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
NA18992	hp2	a0003	c0003	t0001	g0012	EAS	JPT	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
NA18993	hp1	a0001	c0001	t0001	g0054	EAS	JPT	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
NA18993	hp2	a0001	c0001	t0001	g0009	EAS	JPT	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
NA18994	hp1	a0001	c0001	t0001	g0002	EAS	JPT	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
NA18994	hp2	a0002	c0002	t0001	g0001	EAS	JPT	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
NA18997	hp1	a0002	c0002	t0001	g0001	EAS	JPT	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
NA18997	hp2	a0003	c0003	t0001	g0005	EAS	JPT	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
NA18998	hp1	a0004	c0004	t0001	g0102	EAS	JPT	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
NA18998	hp2	a0002	c0002	t0001	g0024	EAS	JPT	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
NA18999	hp1	a0001	c0001	t0001	g0003	EAS	JPT	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
NA18999	hp2	a0002	c0002	t0001	g0001	EAS	JPT	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
NA19000	hp1	a0001	c0001	t0001	g0003	EAS	JPT	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
NA19000	hp2	a0009	c0013	t0001	g0001	EAS	JPT	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
NA19001	hp1	a0001	c0001	t0001	g0009	EAS	JPT	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
NA19001	hp2	a0002	c0002	t0001	g0001	EAS	JPT	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
NA19003	hp1	a0002	c0002	t0001	g0001	EAS	JPT	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
NA19003	hp2	a0003	c0003	t0001	g0005	EAS	JPT	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
NA19004	hp1	a0004	c0004	t0001	g0016	EAS	JPT	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
NA19004	hp2	a0001	c0001	t0001	g0004	EAS	JPT	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
NA19005	hp1	a0004	c0004	t0001	g0007	EAS	JPT	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
NA19005	hp2	a0001	c0001	t0001	g0055	EAS	JPT	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
NA19006	hp1	a0001	c0001	t0001	g0002	EAS	JPT	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
NA19006	hp2	a0002	c0002	t0001	g0023	EAS	JPT	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
NA19007	hp1	a0004	c0004	t0001	g0007	EAS	JPT	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
NA19007	hp2	a0004	c0004	t0001	g0077	EAS	JPT	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
NA19009	hp1	a0002	c0002	t0001	g0001	EAS	JPT	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
NA19009	hp2	a0001	c0001	t0001	g0003	EAS	JPT	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
NA19010	hp1	a0001	c0001	t0001	g0004	EAS	JPT	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
NA19010	hp2	a0001	c0001	t0001	g0009	EAS	JPT	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
NA19011	hp1	a0001	c0001	t0001	g0009	EAS	JPT	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
NA19011	hp2	a0002	c0007	t0001	g0001	EAS	JPT	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
NA19030	hp1	a0001	c0001	t0001	g0028	AFR	LWK	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
NA19030	hp2	a0003	c0003	t0001	g0061	AFR	LWK	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
NA19043	hp1	a0001	c0001	t0001	g0049	AFR	LWK	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
NA19043	hp2	a0001	c0001	t0001	g0011	AFR	LWK	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
NA19054	hp1	a0003	c0003	t0001	g0005	EAS	JPT	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
NA19054	hp2	a0001	c0001	t0001	g0002	EAS	JPT	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
NA19055	hp1	a0002	c0002	t0001	g0014	EAS	JPT	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
NA19055	hp2	a0003	c0003	t0001	g0083	EAS	JPT	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
NA19056	hp1	a0001	c0001	t0001	g0027	EAS	JPT	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
NA19056	hp2	a0002	c0002	t0001	g0109	EAS	JPT	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
NA19058	hp1	a0003	c0003	t0001	g0005	EAS	JPT	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
NA19058	hp2	a0001	c0001	t0001	g0015	EAS	JPT	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
NA19062	hp1	a0002	c0002	t0001	g0022	EAS	JPT	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
NA19062	hp2	a0003	c0003	t0001	g0087	EAS	JPT	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
NA19063	hp1	a0003	c0003	t0001	g0088	EAS	JPT	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
NA19063	hp2	a0003	c0003	t0001	g0005	EAS	JPT	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
NA19064	hp1	a0003	c0003	t0001	g0005	EAS	JPT	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
NA19064	hp2	a0001	c0001	t0001	g0003	EAS	JPT	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
NA19065	hp1	a0002	c0002	t0001	g0001	EAS	JPT	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
NA19065	hp2	a0003	c0003	t0001	g0012	EAS	JPT	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
NA19066	hp1	a0001	c0001	t0001	g0003	EAS	JPT	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
NA19066	hp2	a0003	c0003	t0001	g0005	EAS	JPT	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
NA19067	hp1	a0001	c0001	t0001	g0051	EAS	JPT	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
NA19067	hp2	a0002	c0002	t0001	g0001	EAS	JPT	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
NA19068	hp1	a0001	c0001	t0001	g0003	EAS	JPT	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
NA19068	hp2	a0003	c0003	t0001	g0090	EAS	JPT	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
NA19070	hp1	a0002	c0002	t0001	g0001	EAS	JPT	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
NA19070	hp2	a0003	c0003	t0001	g0089	EAS	JPT	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
NA19074	hp1	a0003	c0003	t0001	g0033	EAS	JPT	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
NA19074	hp2	a0004	c0004	t0001	g0007	EAS	JPT	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
NA19075	hp1	a0001	c0001	t0001	g0003	EAS	JPT	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
NA19075	hp2	a0004	c0004	t0001	g0007	EAS	JPT	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
NA19076	hp1	a0003	c0003	t0001	g0005	EAS	JPT	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
NA19076	hp2	a0002	c0002	t0001	g0106	EAS	JPT	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
NA19079	hp1	a0002	c0017	t0001	g0001	EAS	JPT	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
NA19079	hp2	a0002	c0002	t0001	g0022	EAS	JPT	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
NA19080	hp1	a0002	c0007	t0001	g0001	EAS	JPT	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
NA19080	hp2	a0003	c0003	t0001	g0012	EAS	JPT	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
NA19081	hp1	a0001	c0001	t0001	g0015	EAS	JPT	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
NA19081	hp2	a0004	c0004	t0001	g0007	EAS	JPT	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
NA19083	hp1	a0002	c0002	t0001	g0023	EAS	JPT	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
NA19083	hp2	a0001	c0001	t0001	g0021	EAS	JPT	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
NA19084	hp1	a0001	c0001	t0001	g0030	EAS	JPT	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
NA19084	hp2	a0003	c0003	t0001	g0005	EAS	JPT	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
NA19085	hp1	a0002	c0002	t0001	g0001	EAS	JPT	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
NA19085	hp2	a0001	c0001	t0001	g0009	EAS	JPT	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
NA19086	hp1	a0004	c0004	t0001	g0093	EAS	JPT	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
NA19086	hp2	a0002	c0002	t0001	g0034	EAS	JPT	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
NA19088	hp1	a0002	c0002	t0001	g0112	EAS	JPT	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
NA19088	hp2	a0002	c0002	t0001	g0113	EAS	JPT	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
NA19089	hp1	a0002	c0002	t0001	g0001	EAS	JPT	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
NA19089	hp2	a0004	c0004	t0001	g0007	EAS	JPT	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
NA19091	hp1	a0001	c0001	t0001	g0009	EAS	JPT	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
NA19091	hp2	a0003	c0003	t0001	g0032	EAS	JPT	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
NA19240	hp1	a0001	c0001	t0001	g0010	AFR	YRI	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
NA19240	hp2	a0001	c0005	t0001	g0006	AFR	YRI	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
NA20129	hp1	a0001	c0001	t0001	g0057	AFR	ASW	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
NA20129	hp2	a0005	c0008	t0001	g0031	AFR	ASW	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
NA20752	hp1	a0001	c0001	t0001	g0002	EUR	TSI	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
NA20752	hp2	a0010	c0011	t0001	g0001	EUR	TSI	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
HG01123	hp1	a0001	c0001	t0001	g0003	AMR	CLM	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
HG01123	hp2	a0002	c0002	t0001	g0111	AMR	CLM	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
HG02109	hp1	a0001	c0001	t0001	g0008	AFR	ACB	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
HG02109	hp2	a0002	c0002	t0001	g0001	AFR	ACB	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
HG02486	hp1	a0001	c0001	t0001	g0056	AFR	ACB	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
HG02486	hp2	a0001	c0001	t0001	g0006	AFR	ACB	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
HG02559	hp1	a0001	c0001	t0001	g0020	AFR	ACB	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
HG02559	hp2	a0001	c0001	t0001	g0013	AFR	ACB	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
HG03471	hp1	a0001	c0001	t0001	g0017	AFR	MSL	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
HG03471	hp2	a0001	c0001	t0001	g0075	AFR	MSL	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
HG06807	hp1	a0001	c0001	t0001	g0004	AFR	USA	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
HG06807	hp2	a0001	c0001	t0001	g0013	AFR	USA	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
NA20300	hp1	a0002	c0002	t0001	g0076	AFR	USA	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
NA20300	hp2	a0004	c0004	t0001	g0038	AFR	USA	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
NA21309	hp1	a0001	c0001	t0001	g0002	AFR	LWK	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
NA21309	hp2	a0001	c0005	t0001	g0097	AFR	LWK	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
homoSapiens_chm13v2	hp1	a0002	c0002	t0001	g0001	REF	REF	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197
homoSapiens_grch38	hp1	a0001	c0001	t0001	g0095	REF	REF	CPT2_chr1_53191824_53219197	CPT2	chr1	53191824	53219197

chr:pos	ref	alt	# # of ahapid:amino-acid(protein) level	ahapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	hgvs_p	genename	geneid	featuretype	featureid	transcript_biotype	rank	cdna cdna pos length	cds cds pos length	aa aa pos length	chr	pos
chr1:53202391	C C	T T	1	a0012 a0012	1	HG02055.hp1 HG02055.hp1	missense_variant	MODERATE	c.302C>T c.302C>T	p.Ala101Val p.Ala101Val	CPT2	ENSG00000157184.7	transcript	ENST00000371486.4	protein_coding	3/5	422/2699	302/1977	101/658	chr1	53202391
chr1:53210027	A A	G G	1	a0006 a0006	2	HG01099.hp2 HG01358.hp1 HG01099.hp2 HG01358.hp1	missense_variant	MODERATE	c.353A>G c.353A>G	p.Asp118Gly p.Asp118Gly	CPT2	ENSG00000157184.7	transcript	ENST00000371486.4	protein_coding	4/5	473/2699	353/1977	118/658	chr1	53210027
chr1:53210729	T T	G G	1	a0003 a0003	40	HG00741.hp2 HG01255.hp1 HG01975.hp2 others(37): Show HG00741.hp2 HG01255.hp1 HG01975.hp2 HG02027.hp2 HG02071.hp1 HG02074.hp2 HG02132.hp2 NA18612.hp2 NA18945.hp2 NA18946.hp2 NA18950.hp1 NA18951.hp1 NA18953.hp1 NA18960.hp2 NA18971.hp2 NA18972.hp2 NA18977.hp2 NA18981.hp1 NA18986.hp1 NA18988.hp2 NA18992.hp2 NA18997.hp2 NA19003.hp2 NA19030.hp2 NA19054.hp1 NA19055.hp2 NA19058.hp1 NA19062.hp2 NA19063.hp1 NA19063.hp2 NA19064.hp1 NA19065.hp2 NA19066.hp2 NA19068.hp2 NA19070.hp2 NA19074.hp1 NA19076.hp1 NA19080.hp2 NA19084.hp2 NA19091.hp2	missense_variant	MODERATE	c.1055T>G c.1055T>G	p.Phe352Cys p.Phe352Cys	CPT2	ENSG00000157184.7	transcript	ENST00000371486.4	protein_coding	4/5	1175/2699	1055/1977	352/658	chr1	53210729
chr1:53210776	G G	A A	10	a0002 a0003 a0004 others(7): Show a0002 a0003 a0004 a0005 a0006 a0007 a0008 a0009 a0010 a0012	168	HG00140.hp2 HG00323.hp1 HG00323.hp2 others(165): Show HG00140.hp2 HG00323.hp1 HG00323.hp2 HG00408.hp2 HG00438.hp1 HG00438.hp2 HG00544.hp2 HG00558.hp1 HG00558.hp2 HG00597.hp2 HG00741.hp2 HG01070.hp2 HG01071.hp1 HG01081.hp1 HG01081.hp2 HG01099.hp2 HG01106.hp2 HG01123.hp2 HG01167.hp1 HG01168.hp2 HG01169.hp2 HG01175.hp1 HG01243.hp2 HG01255.hp1 HG01255.hp2 HG01258.hp2 HG01346.hp1 HG01346.hp2 HG01358.hp1 HG01358.hp2 HG01361.hp2 HG01515.hp2 HG01975.hp2 HG02015.hp1 HG02015.hp2 HG02027.hp2 HG02040.hp1 HG02055.hp1 HG02071.hp1 HG02074.hp2 HG02080.hp1 HG02083.hp1 HG02109.hp2 HG02132.hp1 HG02132.hp2 HG02148.hp2 HG02165.hp1 HG02165.hp2 HG02273.hp2 HG02300.hp2 HG02630.hp1 HG02683.hp2 HG02818.hp1 HG02818.hp2 HG03017.hp1 HG03098.hp1 HG03139.hp2 HG03195.hp1 HG03225.hp1 HG03831.hp1 HG03831.hp2 HG03927.hp1 HG04199.hp1 HG04228.hp2 NA18612.hp2 NA18906.hp2 NA18939.hp1 NA18944.hp1 NA18944.hp2 NA18945.hp2 NA18946.hp2 NA18948.hp1 NA18948.hp2 NA18949.hp1 NA18950.hp1 NA18951.hp1 NA18951.hp2 NA18953.hp1 NA18954.hp2 NA18959.hp1 NA18960.hp1 NA18960.hp2 NA18961.hp1 NA18961.hp2 NA18963.hp2 NA18965.hp2 NA18969.hp1 NA18970.hp1 NA18970.hp2 NA18971.hp1 NA18971.hp2 NA18972.hp1 NA18972.hp2 NA18973.hp1 NA18973.hp2 NA18977.hp1 NA18977.hp2 NA18980.hp2 NA18981.hp1 NA18981.hp2 NA18983.hp2 NA18986.hp1 NA18986.hp2 NA18988.hp2 NA18990.hp1 NA18991.hp1 NA18992.hp1 NA18992.hp2 NA18994.hp2 NA18997.hp1 NA18997.hp2 NA18998.hp1 NA18998.hp2 NA18999.hp2 NA19000.hp2 NA19001.hp2 NA19003.hp1 NA19003.hp2 NA19004.hp1 NA19005.hp1 NA19006.hp2 NA19007.hp1 NA19007.hp2 NA19009.hp1 NA19011.hp2 NA19030.hp2 NA19054.hp1 NA19055.hp1 NA19055.hp2 NA19056.hp2 NA19058.hp1 NA19062.hp1 NA19062.hp2 NA19063.hp1 NA19063.hp2 NA19064.hp1 NA19065.hp1 NA19065.hp2 NA19066.hp2 NA19067.hp2 NA19068.hp2 NA19070.hp1 NA19070.hp2 NA19074.hp1 NA19074.hp2 NA19075.hp2 NA19076.hp1 NA19076.hp2 NA19079.hp1 NA19079.hp2 NA19080.hp1 NA19080.hp2 NA19081.hp2 NA19083.hp1 NA19084.hp2 NA19085.hp1 NA19086.hp1 NA19086.hp2 NA19088.hp1 NA19088.hp2 NA19089.hp1 NA19089.hp2 NA19091.hp2 NA20129.hp2 NA20300.hp1 NA20300.hp2 NA20752.hp2 homoSapiens_chm13v2.hp1	missense_variant	MODERATE	c.1102G>A c.1102G>A	p.Val368Ile p.Val368Ile	CPT2	ENSG00000157184.7	transcript	ENST00000371486.4	protein_coding	4/5	1222/2699	1102/1977	368/658	chr1	53210776
chr1:53210921	A A	G G	1	a0011 a0011	1	HG00639.hp2 HG00639.hp2	missense_variant	MODERATE	c.1247A>G c.1247A>G	p.Asn416Ser p.Asn416Ser	CPT2	ENSG00000157184.7	transcript	ENST00000371486.4	protein_coding	4/5	1367/2699	1247/1977	416/658	chr1	53210921
chr1:53210928	GCTGACTG others(23): Show GCTGACTGATGCCTTAAAGACTGGCATCACA	G G	1	a0007 a0007	1	HG03139.hp2 HG03139.hp2	conservative_inframe_deletion	MODERATE	c.1255_1284delCTGACT others(24): Show c.1255_1284delCTGACTGATGCCTTAAAGACTGGCATCACA	p.Leu419_Thr428del p.Leu419_Thr428del	CPT2	ENSG00000157184.7	transcript	ENST00000371486.4	protein_coding	4/5	1375/2699	1255/1977	419/658	chr1	53210928
chr1:53211112	G G	A A	1	a0010 a0010	1	NA20752.hp2 NA20752.hp2	missense_variant	MODERATE	c.1438G>A c.1438G>A	p.Gly480Arg p.Gly480Arg	CPT2	ENSG00000157184.7	transcript	ENST00000371486.4	protein_coding	4/5	1558/2699	1438/1977	480/658	chr1	53211112
chr1:53211272	T T	C C	1	a0005 a0005	2	HG02630.hp1 NA20129.hp2 HG02630.hp1 NA20129.hp2	missense_variant	MODERATE	c.1598T>C c.1598T>C	p.Val533Ala p.Val533Ala	CPT2	ENSG00000157184.7	transcript	ENST00000371486.4	protein_coding	4/5	1718/2699	1598/1977	533/658	chr1	53211272
chr1:53213297	G G	A A	1	a0008 a0008	1	HG01346.hp1 HG01346.hp1	missense_variant	MODERATE	c.1679G>A c.1679G>A	p.Arg560Gln p.Arg560Gln	CPT2	ENSG00000157184.7	transcript	ENST00000371486.4	protein_coding	5/5	1799/2699	1679/1977	560/658	chr1	53213297
chr1:53213438	C C	G G	1	a0009 a0009	1	NA19000.hp2 NA19000.hp2	missense_variant	MODERATE	c.1820C>G c.1820C>G	p.Ser607Cys p.Ser607Cys	CPT2	ENSG00000157184.7	transcript	ENST00000371486.4	protein_coding	5/5	1940/2699	1820/1977	607/658	chr1	53213438
chr1:53213557	A A	G G	3	a0004 a0007 a0008 a0004 a0007 a0008	36	HG00408.hp2 HG00438.hp2 HG00544.hp2 others(33): Show HG00408.hp2 HG00438.hp2 HG00544.hp2 HG00558.hp1 HG01081.hp2 HG01106.hp2 HG01167.hp1 HG01168.hp2 HG01169.hp2 HG01346.hp1 HG01358.hp2 HG02015.hp2 HG02165.hp1 HG02300.hp2 HG02683.hp2 HG02818.hp2 HG03139.hp2 HG03831.hp1 HG04228.hp2 NA18963.hp2 NA18965.hp2 NA18970.hp2 NA18971.hp1 NA18972.hp1 NA18973.hp1 NA18998.hp1 NA19004.hp1 NA19005.hp1 NA19007.hp1 NA19007.hp2 NA19074.hp2 NA19075.hp2 NA19081.hp2 NA19086.hp1 NA19089.hp2 NA20300.hp2	missense_variant	MODERATE	c.1939A>G c.1939A>G	p.Met647Val p.Met647Val	CPT2	ENSG00000157184.7	transcript	ENST00000371486.4	protein_coding	5/5	2059/2699	1939/1977	647/658	chr1	53213557

chr:pos	ref	alt	# # of chapid	chapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	hgvs_p	genename	geneid	featuretype	featureid	transcript_biotype	rank	cdna cdna pos length	cds cds pos length	aa aa pos length	chr	pos
chr1:53200761	C C	G G	1	a0002c0017 a0002c0017	1	NA19079.hp1 NA19079.hp1	synonymous_variant	LOW	c.195C>G c.195C>G	p.Leu65Leu p.Leu65Leu	CPT2	ENSG00000157184.7	transcript	ENST00000371486.4	protein_coding	2/5	315/2699	195/1977	65/658	chr1	53200761
chr1:53210185	C C	T T	1	a0001c0006 a0001c0006	6	HG02257.hp1 HG02896.hp2 HG03041.hp1 others(3): Show HG02257.hp1 HG02896.hp2 HG03041.hp1 HG03130.hp2 HG03540.hp1 NA18522.hp1	synonymous_variant	LOW	c.511C>T c.511C>T	p.Leu171Leu p.Leu171Leu	CPT2	ENSG00000157184.7	transcript	ENST00000371486.4	protein_coding	4/5	631/2699	511/1977	171/658	chr1	53210185
chr1:53210262	T T	C C	1	a0002c0007 a0002c0007	3	HG02132.hp1 NA19011.hp2 NA19080.hp1 HG02132.hp1 NA19011.hp2 NA19080.hp1	synonymous_variant	LOW	c.588T>C c.588T>C	p.Pro196Pro p.Pro196Pro	CPT2	ENSG00000157184.7	transcript	ENST00000371486.4	protein_coding	4/5	708/2699	588/1977	196/658	chr1	53210262
chr1:53211078	G G	A A	1	a0002c0010 a0002c0010	1	NA18948.hp2 NA18948.hp2	synonymous_variant	LOW	c.1404G>A c.1404G>A	p.Gln468Gln p.Gln468Gln	CPT2	ENSG00000157184.7	transcript	ENST00000371486.4	protein_coding	4/5	1524/2699	1404/1977	468/658	chr1	53211078
chr1:53213385	G G	A A	1	a0001c0005 a0001c0005	11	HG00642.hp2 HG00735.hp2 HG01192.hp2 others(8): Show HG00642.hp2 HG00735.hp2 HG01192.hp2 HG02451.hp1 HG02615.hp2 HG02630.hp2 HG02723.hp2 HG03098.hp2 HG03486.hp2 NA19240.hp2 NA21309.hp2	synonymous_variant	LOW	c.1767G>A c.1767G>A	p.Thr589Thr p.Thr589Thr	CPT2	ENSG00000157184.7	transcript	ENST00000371486.4	protein_coding	5/5	1887/2699	1767/1977	589/658	chr1	53213385

chr:pos	ref	alt	# # of thapid:transcript level	thapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	hgvs_p	genename	geneid	featuretype	featureid	transcript_biotype	rank	cdna cdna pos length	cds cds pos length	aa aa pos length	distance	status	chr	pos

chr:pos	ref	alt	# # of ghapid:genebody level	ghapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	genename	geneid	featuretype	featureid	genebody_biotype	rank	status	chr	pos
chr1:53197151	C C	A A	8	a0004c0004t0001g0007 a0004c0004t0001g0025 a0004c0004t0001g0037 others(5): Show a0004c0004t0001g0007 a0004c0004t0001g0025 a0004c0004t0001g0037 a0004c0004t0001g0038 a0004c0004t0001g0039 a0004c0004t0001g0040 a0004c0004t0001g0041 a0008c0012t0001g0025	23	HG00438.hp2 HG01081.hp2 HG01106.hp2 others(20): Show HG00438.hp2 HG01081.hp2 HG01106.hp2 HG01167.hp1 HG01168.hp2 HG01169.hp2 HG01346.hp1 HG01358.hp2 HG02015.hp2 HG02165.hp1 HG02300.hp2 HG02683.hp2 HG03831.hp1 HG04228.hp2 NA18963.hp2 NA18971.hp1 NA19005.hp1 NA19007.hp1 NA19074.hp2 NA19075.hp2 NA19081.hp2 NA19089.hp2 NA20300.hp2	intron_variant	MODIFIER	c.152+56C>A c.152+56C>A	CPT2	ENSG00000157184.7	transcript	ENST00000371486.4	protein_coding	1/4		chr1	53197151
chr1:53197456	G G	T T	26	a0002c0002t0001g0001 a0002c0002t0001g0014 a0002c0002t0001g0022 others(23): Show a0002c0002t0001g0001 a0002c0002t0001g0014 a0002c0002t0001g0022 a0002c0002t0001g0023 a0002c0002t0001g0024 a0002c0002t0001g0034 a0002c0002t0001g0035 a0002c0002t0001g0036 a0002c0002t0001g0104 a0002c0002t0001g0105 a0002c0002t0001g0106 a0002c0002t0001g0107 a0002c0002t0001g0108 a0002c0002t0001g0109 a0002c0002t0001g0110 a0002c0002t0001g0111 a0002c0002t0001g0112 a0002c0002t0001g0113 a0002c0002t0001g0114 a0002c0007t0001g0001 a0002c0010t0001g0001 a0002c0017t0001g0001 a0006c0009t0001g0001 a0006c0009t0001g0023 a0009c0013t0001g0001 a0010c0011t0001g0001	84	HG00140.hp2 HG00323.hp1 HG00323.hp2 others(81): Show HG00140.hp2 HG00323.hp1 HG00323.hp2 HG00438.hp1 HG00558.hp2 HG00597.hp2 HG01070.hp2 HG01071.hp1 HG01081.hp1 HG01099.hp2 HG01123.hp2 HG01175.hp1 HG01243.hp2 HG01255.hp2 HG01258.hp2 HG01346.hp2 HG01358.hp1 HG01361.hp2 HG01515.hp2 HG02015.hp1 HG02040.hp1 HG02080.hp1 HG02083.hp1 HG02109.hp2 HG02132.hp1 HG02148.hp2 HG02165.hp2 HG02273.hp2 HG03017.hp1 HG03195.hp1 HG03831.hp2 HG03927.hp1 HG04199.hp1 NA18939.hp1 NA18944.hp1 NA18944.hp2 NA18948.hp1 NA18948.hp2 NA18949.hp1 NA18951.hp2 NA18954.hp2 NA18959.hp1 NA18960.hp1 NA18961.hp1 NA18961.hp2 NA18969.hp1 NA18970.hp1 NA18973.hp2 NA18977.hp1 NA18980.hp2 NA18981.hp2 NA18983.hp2 NA18986.hp2 NA18990.hp1 NA18991.hp1 NA18992.hp1 NA18994.hp2 NA18997.hp1 NA18998.hp2 NA18999.hp2 NA19000.hp2 NA19001.hp2 NA19003.hp1 NA19006.hp2 NA19009.hp1 NA19011.hp2 NA19055.hp1 NA19056.hp2 NA19062.hp1 NA19065.hp1 NA19067.hp2 NA19070.hp1 NA19076.hp2 NA19079.hp1 NA19079.hp2 NA19080.hp1 NA19083.hp1 NA19085.hp1 NA19086.hp2 NA19088.hp1 NA19088.hp2 NA19089.hp1 NA20752.hp2 homoSapiens_chm13v2.hp1	intron_variant	MODIFIER	c.152+361G>T c.152+361G>T	CPT2	ENSG00000157184.7	transcript	ENST00000371486.4	protein_coding	1/4		chr1	53197456
chr1:53197693	CA CA	C C	1	a0001c0001t0001g0021 a0001c0001t0001g0021	3	HG02040.hp2 HG04228.hp1 NA19083.hp2 HG02040.hp2 HG04228.hp1 NA19083.hp2	intron_variant	MODIFIER	c.152+599delA c.152+599delA	CPT2	ENSG00000157184.7	transcript	ENST00000371486.4	protein_coding	1/4		chr1	53197693
chr1:53197745	C C	T T	1	a0002c0002t0001g0114 a0002c0002t0001g0114	1	NA18948.hp1 NA18948.hp1	intron_variant	MODIFIER	c.152+650C>T c.152+650C>T	CPT2	ENSG00000157184.7	transcript	ENST00000371486.4	protein_coding	1/4		chr1	53197745
chr1:53197937	C C	T T	2	a0001c0001t0001g0020 a0001c0001t0001g0103 a0001c0001t0001g0020 a0001c0001t0001g0103	4	HG02559.hp1 HG03130.hp1 HG03453.hp1 others(1): Show HG02559.hp1 HG03130.hp1 HG03453.hp1 NA18522.hp2	intron_variant	MODIFIER	c.152+842C>T c.152+842C>T	CPT2	ENSG00000157184.7	transcript	ENST00000371486.4	protein_coding	1/4		chr1	53197937
chr1:53197969	C C	T T	4	a0004c0004t0001g0099 a0004c0004t0001g0100 a0004c0004t0001g0101 others(1): Show a0004c0004t0001g0099 a0004c0004t0001g0100 a0004c0004t0001g0101 a0004c0004t0001g0102	4	HG00408.hp2 HG00558.hp1 NA18973.hp1 others(1): Show HG00408.hp2 HG00558.hp1 NA18973.hp1 NA18998.hp1	intron_variant	MODIFIER	c.152+874C>T c.152+874C>T	CPT2	ENSG00000157184.7	transcript	ENST00000371486.4	protein_coding	1/4		chr1	53197969
chr1:53198310	G G	A A	2	a0002c0002t0001g0034 a0002c0002t0001g0104 a0002c0002t0001g0034 a0002c0002t0001g0104	3	NA18961.hp2 NA18980.hp2 NA19086.hp2 NA18961.hp2 NA18980.hp2 NA19086.hp2	intron_variant	MODIFIER	c.152+1215G>A c.152+1215G>A	CPT2	ENSG00000157184.7	transcript	ENST00000371486.4	protein_coding	1/4		chr1	53198310
chr1:53198345	A A	C C	1	a0001c0001t0001g0098 a0001c0001t0001g0098	1	HG03688.hp2 HG03688.hp2	intron_variant	MODIFIER	c.152+1250A>C c.152+1250A>C	CPT2	ENSG00000157184.7	transcript	ENST00000371486.4	protein_coding	1/4		chr1	53198345
chr1:53198435	C C	T T	1	a0001c0005t0001g0097 a0001c0005t0001g0097	1	NA21309.hp2 NA21309.hp2	intron_variant	MODIFIER	c.152+1340C>T c.152+1340C>T	CPT2	ENSG00000157184.7	transcript	ENST00000371486.4	protein_coding	1/4		chr1	53198435
chr1:53198636	G G	C C	1	a0001c0001t0001g0042 a0001c0001t0001g0042	1	HG03486.hp1 HG03486.hp1	intron_variant	MODIFIER	c.152+1541G>C c.152+1541G>C	CPT2	ENSG00000157184.7	transcript	ENST00000371486.4	protein_coding	1/4		chr1	53198636
chr1:53198893	C C	T T	2	a0001c0001t0001g0009 a0001c0001t0001g0096 a0001c0001t0001g0009 a0001c0001t0001g0096	10	HG02083.hp2 NA18939.hp2 NA18942.hp1 others(7): Show HG02083.hp2 NA18939.hp2 NA18942.hp1 NA18980.hp1 NA18993.hp2 NA19001.hp1 NA19010.hp2 NA19011.hp1 NA19085.hp2 NA19091.hp1	intron_variant	MODIFIER	c.152+1798C>T c.152+1798C>T	CPT2	ENSG00000157184.7	transcript	ENST00000371486.4	protein_coding	1/4		chr1	53198893
chr1:53198941	T T	C C	1	a0001c0001t0001g0043 a0001c0001t0001g0043	1	HG04204.hp2 HG04204.hp2	intron_variant	MODIFIER	c.153-1778T>C c.153-1778T>C	CPT2	ENSG00000157184.7	transcript	ENST00000371486.4	protein_coding	1/4		chr1	53198941
chr1:53199085	C C	CAG CAG	125	a0001c0001t0001g0002 a0001c0001t0001g0003 a0001c0001t0001g0004 others(122): Show a0001c0001t0001g0002 a0001c0001t0001g0003 a0001c0001t0001g0004 a0001c0001t0001g0006 a0001c0001t0001g0008 a0001c0001t0001g0009 a0001c0001t0001g0010 a0001c0001t0001g0011 a0001c0001t0001g0013 a0001c0001t0001g0015 a0001c0001t0001g0017 a0001c0001t0001g0018 a0001c0001t0001g0020 a0001c0001t0001g0021 a0001c0001t0001g0026 a0001c0001t0001g0027 a0001c0001t0001g0028 a0001c0001t0001g0029 a0001c0001t0001g0030 a0001c0001t0001g0042 a0001c0001t0001g0043 a0001c0001t0001g0044 a0001c0001t0001g0045 a0001c0001t0001g0046 a0001c0001t0001g0047 a0001c0001t0001g0048 a0001c0001t0001g0049 a0001c0001t0001g0050 a0001c0001t0001g0051 a0001c0001t0001g0052 a0001c0001t0001g0053 a0001c0001t0001g0054 a0001c0001t0001g0055 a0001c0001t0001g0056 a0001c0001t0001g0057 a0001c0001t0001g0058 a0001c0001t0001g0059 a0001c0001t0001g0060 a0001c0001t0001g0062 a0001c0001t0001g0063 a0001c0001t0001g0064 a0001c0001t0001g0065 a0001c0001t0001g0066 a0001c0001t0001g0067 a0001c0001t0001g0068 a0001c0001t0001g0069 a0001c0001t0001g0070 a0001c0001t0001g0071 a0001c0001t0001g0073 a0001c0001t0001g0074 a0001c0001t0001g0075 a0001c0001t0001g0091 a0001c0001t0001g0092 a0001c0001t0001g0096 a0001c0001t0001g0098 a0001c0001t0001g0103 a0001c0005t0001g0006 a0001c0005t0001g0094 a0001c0005t0001g0097 a0001c0006t0001g0004 a0001c0006t0001g0072 a0002c0002t0001g0001 a0002c0002t0001g0014 a0002c0002t0001g0019 a0002c0002t0001g0022 a0002c0002t0001g0023 a0002c0002t0001g0024 a0002c0002t0001g0034 a0002c0002t0001g0035 a0002c0002t0001g0036 a0002c0002t0001g0076 a0002c0002t0001g0080 a0002c0002t0001g0084 a0002c0002t0001g0104 a0002c0002t0001g0105 a0002c0002t0001g0106 a0002c0002t0001g0107 a0002c0002t0001g0108 a0002c0002t0001g0109 a0002c0002t0001g0110 a0002c0002t0001g0111 a0002c0002t0001g0112 a0002c0002t0001g0113 a0002c0002t0001g0114 a0002c0007t0001g0001 a0002c0010t0001g0001 a0002c0017t0001g0001 a0003c0003t0001g0005 a0003c0003t0001g0012 a0003c0003t0001g0032 a0003c0003t0001g0033 a0003c0003t0001g0061 a0003c0003t0001g0082 a0003c0003t0001g0083 a0003c0003t0001g0085 a0003c0003t0001g0086 a0003c0003t0001g0087 a0003c0003t0001g0088 a0003c0003t0001g0089 a0003c0003t0001g0090 a0004c0004t0001g0007 a0004c0004t0001g0016 a0004c0004t0001g0025 a0004c0004t0001g0037 a0004c0004t0001g0038 a0004c0004t0001g0039 a0004c0004t0001g0040 a0004c0004t0001g0041 a0004c0004t0001g0077 a0004c0004t0001g0079 a0004c0004t0001g0081 a0004c0004t0001g0093 a0004c0004t0001g0099 a0004c0004t0001g0100 a0004c0004t0001g0101 a0004c0004t0001g0102 a0005c0008t0001g0031 a0006c0009t0001g0001 a0006c0009t0001g0023 a0007c0014t0001g0078 a0008c0012t0001g0025 a0009c0013t0001g0001 a0010c0011t0001g0001 a0011c0015t0001g0004 a0012c0016t0001g0019	385	HG00140.hp1 HG00140.hp2 HG00323.hp1 others(382): Show HG00140.hp1 HG00140.hp2 HG00323.hp1 HG00323.hp2 HG00408.hp1 HG00408.hp2 HG00438.hp1 HG00438.hp2 HG00544.hp1 HG00544.hp2 HG00558.hp1 HG00558.hp2 HG00597.hp1 HG00597.hp2 HG00639.hp1 HG00639.hp2 HG00642.hp1 HG00642.hp2 HG00735.hp1 HG00735.hp2 HG00738.hp1 HG00738.hp2 HG00741.hp1 HG00741.hp2 HG01070.hp1 HG01070.hp2 HG01071.hp1 HG01071.hp2 HG01074.hp1 HG01074.hp2 HG01081.hp1 HG01081.hp2 HG01099.hp1 HG01099.hp2 HG01106.hp1 HG01106.hp2 HG01123.hp1 HG01123.hp2 HG01167.hp1 HG01167.hp2 HG01168.hp1 HG01168.hp2 HG01169.hp1 HG01169.hp2 HG01175.hp1 HG01175.hp2 HG01192.hp1 HG01192.hp2 HG01243.hp1 HG01243.hp2 HG01255.hp1 HG01255.hp2 HG01258.hp1 HG01258.hp2 HG01346.hp1 HG01346.hp2 HG01358.hp1 HG01358.hp2 HG01361.hp1 HG01361.hp2 HG01433.hp1 HG01433.hp2 HG01515.hp1 HG01515.hp2 HG01516.hp1 HG01516.hp2 HG01517.hp1 HG01517.hp2 HG01884.hp1 HG01884.hp2 HG01891.hp1 HG01891.hp2 HG01943.hp1 HG01943.hp2 HG01952.hp1 HG01952.hp2 HG01975.hp1 HG01975.hp2 HG01981.hp1 HG01981.hp2 HG01993.hp1 HG01993.hp2 HG02004.hp1 HG02004.hp2 HG02015.hp1 HG02015.hp2 HG02027.hp1 HG02027.hp2 HG02040.hp1 HG02040.hp2 HG02055.hp1 HG02055.hp2 HG02071.hp1 HG02071.hp2 HG02074.hp1 HG02074.hp2 HG02080.hp1 HG02080.hp2 HG02083.hp1 HG02083.hp2 HG02109.hp1 HG02109.hp2 HG02132.hp1 HG02132.hp2 HG02145.hp1 HG02145.hp2 HG02148.hp1 HG02148.hp2 HG02165.hp1 HG02165.hp2 HG02257.hp1 HG02257.hp2 HG02258.hp1 HG02258.hp2 HG02273.hp1 HG02273.hp2 HG02280.hp1 HG02280.hp2 HG02293.hp1 HG02293.hp2 HG02300.hp1 HG02300.hp2 HG02451.hp1 HG02451.hp2 HG02486.hp1 HG02486.hp2 HG02559.hp1 HG02559.hp2 HG02572.hp1 HG02572.hp2 HG02602.hp1 HG02602.hp2 HG02615.hp1 HG02615.hp2 HG02622.hp1 HG02622.hp2 HG02630.hp1 HG02630.hp2 HG02647.hp1 HG02647.hp2 HG02683.hp1 HG02683.hp2 HG02698.hp1 HG02698.hp2 HG02717.hp1 HG02717.hp2 HG02723.hp1 HG02723.hp2 HG02735.hp1 HG02735.hp2 HG02738.hp1 HG02738.hp2 HG02809.hp1 HG02809.hp2 HG02818.hp1 HG02818.hp2 HG02895.hp1 HG02895.hp2 HG02896.hp1 HG02896.hp2 HG02897.hp1 HG02897.hp2 HG02922.hp1 HG02922.hp2 HG02965.hp1 HG02965.hp2 HG03017.hp1 HG03017.hp2 HG03041.hp1 HG03041.hp2 HG03098.hp1 HG03098.hp2 HG03130.hp1 HG03130.hp2 HG03139.hp1 HG03139.hp2 HG03195.hp1 HG03195.hp2 HG03209.hp1 HG03209.hp2 HG03225.hp1 HG03225.hp2 HG03453.hp1 HG03453.hp2 HG03471.hp1 HG03471.hp2 HG03486.hp1 HG03486.hp2 HG03492.hp1 HG03492.hp2 HG03516.hp1 HG03516.hp2 HG03540.hp1 HG03540.hp2 HG03579.hp1 HG03579.hp2 HG03654.hp1 HG03654.hp2 HG03669.hp1 HG03669.hp2 HG03688.hp1 HG03688.hp2 HG03831.hp1 HG03831.hp2 HG03834.hp1 HG03834.hp2 HG03927.hp1 HG03927.hp2 HG04115.hp1 HG04115.hp2 HG04184.hp1 HG04184.hp2 HG04199.hp1 HG04199.hp2 HG04204.hp1 HG04204.hp2 HG04228.hp1 HG04228.hp2 HG06807.hp1 HG06807.hp2 NA18522.hp1 NA18522.hp2 NA18612.hp1 NA18612.hp2 NA18906.hp1 NA18906.hp2 NA18939.hp1 NA18939.hp2 NA18941.hp1 NA18941.hp2 NA18942.hp1 NA18942.hp2 NA18944.hp1 NA18944.hp2 NA18945.hp1 NA18945.hp2 NA18946.hp1 NA18946.hp2 NA18948.hp1 NA18948.hp2 NA18949.hp1 NA18949.hp2 NA18950.hp1 NA18950.hp2 NA18951.hp1 NA18951.hp2 NA18953.hp1 NA18953.hp2 NA18954.hp1 NA18954.hp2 NA18959.hp1 NA18959.hp2 NA18960.hp1 NA18960.hp2 NA18961.hp1 NA18961.hp2 NA18963.hp1 NA18963.hp2 NA18965.hp1 NA18965.hp2 NA18969.hp1 NA18969.hp2 NA18970.hp1 NA18970.hp2 NA18971.hp1 NA18971.hp2 NA18972.hp1 NA18972.hp2 NA18973.hp1 NA18973.hp2 NA18977.hp1 NA18977.hp2 NA18980.hp1 NA18980.hp2 NA18981.hp1 NA18981.hp2 NA18982.hp1 NA18982.hp2 NA18983.hp1 NA18983.hp2 NA18986.hp1 NA18986.hp2 NA18988.hp1 NA18988.hp2 NA18990.hp1 NA18990.hp2 NA18991.hp1 NA18991.hp2 NA18992.hp1 NA18992.hp2 NA18993.hp1 NA18993.hp2 NA18994.hp1 NA18994.hp2 NA18997.hp1 NA18997.hp2 NA18998.hp1 NA18998.hp2 NA18999.hp1 NA18999.hp2 NA19000.hp1 NA19000.hp2 NA19001.hp1 NA19001.hp2 NA19003.hp1 NA19003.hp2 NA19004.hp1 NA19004.hp2 NA19005.hp1 NA19005.hp2 NA19006.hp1 NA19006.hp2 NA19007.hp1 NA19007.hp2 NA19009.hp1 NA19009.hp2 NA19010.hp1 NA19010.hp2 NA19011.hp1 NA19011.hp2 NA19030.hp1 NA19030.hp2 NA19043.hp1 NA19043.hp2 NA19054.hp1 NA19054.hp2 NA19055.hp1 NA19055.hp2 NA19056.hp1 NA19056.hp2 NA19058.hp1 NA19058.hp2 NA19062.hp1 NA19062.hp2 NA19063.hp1 NA19063.hp2 NA19064.hp1 NA19064.hp2 NA19065.hp1 NA19065.hp2 NA19066.hp1 NA19066.hp2 NA19067.hp1 NA19067.hp2 NA19068.hp1 NA19068.hp2 NA19070.hp1 NA19070.hp2 NA19074.hp1 NA19074.hp2 NA19075.hp1 NA19075.hp2 NA19076.hp1 NA19076.hp2 NA19079.hp1 NA19079.hp2 NA19080.hp1 NA19080.hp2 NA19081.hp1 NA19081.hp2 NA19083.hp1 NA19083.hp2 NA19084.hp1 NA19084.hp2 NA19085.hp1 NA19085.hp2 NA19086.hp1 NA19086.hp2 NA19088.hp1 NA19088.hp2 NA19089.hp1 NA19089.hp2 NA19091.hp1 NA19091.hp2 NA19240.hp1 NA19240.hp2 NA20129.hp1 NA20129.hp2 NA20300.hp1 NA20300.hp2 NA20752.hp1 NA20752.hp2 NA21309.hp1 NA21309.hp2 homoSapiens_chm13v2.hp1	intron_variant	MODIFIER	c.153-1633_153-1632d others(4): Show c.153-1633_153-1632dupAG	CPT2	ENSG00000157184.7	transcript	ENST00000371486.4	protein_coding	1/4	INFO_REALIGN_3_PRIME	chr1	53199085
chr1:53199168	C C	T T	1	a0001c0005t0001g0094 a0001c0005t0001g0094	1	HG00642.hp2 HG00642.hp2	intron_variant	MODIFIER	c.153-1551C>T c.153-1551C>T	CPT2	ENSG00000157184.7	transcript	ENST00000371486.4	protein_coding	1/4		chr1	53199168
chr1:53199297	G G	C C	3	a0001c0001t0001g0021 a0001c0001t0001g0026 a0001c0001t0001g0044 a0001c0001t0001g0021 a0001c0001t0001g0026 a0001c0001t0001g0044	6	HG00544.hp1 HG02040.hp2 HG04228.hp1 others(3): Show HG00544.hp1 HG02040.hp2 HG04228.hp1 NA18949.hp2 NA18982.hp1 NA19083.hp2	intron_variant	MODIFIER	c.153-1422G>C c.153-1422G>C	CPT2	ENSG00000157184.7	transcript	ENST00000371486.4	protein_coding	1/4		chr1	53199297
chr1:53199442	G G	A A	1	a0004c0004t0001g0099 a0004c0004t0001g0099	1	HG00408.hp2 HG00408.hp2	intron_variant	MODIFIER	c.153-1277G>A c.153-1277G>A	CPT2	ENSG00000157184.7	transcript	ENST00000371486.4	protein_coding	1/4		chr1	53199442
chr1:53199479	C C	G G	64	a0001c0001t0001g0091 a0001c0001t0001g0092 a0002c0002t0001g0001 others(61): Show a0001c0001t0001g0091 a0001c0001t0001g0092 a0002c0002t0001g0001 a0002c0002t0001g0014 a0002c0002t0001g0019 a0002c0002t0001g0022 a0002c0002t0001g0023 a0002c0002t0001g0024 a0002c0002t0001g0034 a0002c0002t0001g0035 a0002c0002t0001g0036 a0002c0002t0001g0076 a0002c0002t0001g0080 a0002c0002t0001g0084 a0002c0002t0001g0104 a0002c0002t0001g0105 a0002c0002t0001g0106 a0002c0002t0001g0107 a0002c0002t0001g0108 a0002c0002t0001g0109 a0002c0002t0001g0110 a0002c0002t0001g0111 a0002c0002t0001g0112 a0002c0002t0001g0113 a0002c0002t0001g0114 a0002c0007t0001g0001 a0002c0010t0001g0001 a0002c0017t0001g0001 a0003c0003t0001g0005 a0003c0003t0001g0012 a0003c0003t0001g0032 a0003c0003t0001g0033 a0003c0003t0001g0082 a0003c0003t0001g0083 a0003c0003t0001g0085 a0003c0003t0001g0086 a0003c0003t0001g0087 a0003c0003t0001g0088 a0003c0003t0001g0089 a0003c0003t0001g0090 a0004c0004t0001g0007 a0004c0004t0001g0016 a0004c0004t0001g0025 a0004c0004t0001g0037 a0004c0004t0001g0038 a0004c0004t0001g0039 a0004c0004t0001g0040 a0004c0004t0001g0041 a0004c0004t0001g0077 a0004c0004t0001g0079 a0004c0004t0001g0081 a0004c0004t0001g0093 a0004c0004t0001g0099 a0004c0004t0001g0100 a0004c0004t0001g0101 a0004c0004t0001g0102 a0005c0008t0001g0031 a0006c0009t0001g0001 a0006c0009t0001g0023 a0007c0014t0001g0078 a0008c0012t0001g0025 a0009c0013t0001g0001 a0010c0011t0001g0001 a0012c0016t0001g0019	169	HG00140.hp2 HG00323.hp1 HG00323.hp2 others(166): Show HG00140.hp2 HG00323.hp1 HG00323.hp2 HG00408.hp2 HG00438.hp1 HG00438.hp2 HG00544.hp2 HG00558.hp1 HG00558.hp2 HG00597.hp2 HG00741.hp2 HG01070.hp2 HG01071.hp1 HG01081.hp1 HG01081.hp2 HG01099.hp2 HG01106.hp2 HG01123.hp2 HG01167.hp1 HG01168.hp2 HG01169.hp2 HG01175.hp1 HG01243.hp2 HG01255.hp1 HG01255.hp2 HG01258.hp2 HG01346.hp1 HG01346.hp2 HG01358.hp1 HG01358.hp2 HG01361.hp2 HG01515.hp2 HG01975.hp2 HG02015.hp1 HG02015.hp2 HG02027.hp2 HG02040.hp1 HG02055.hp1 HG02071.hp1 HG02074.hp2 HG02080.hp1 HG02083.hp1 HG02109.hp2 HG02132.hp1 HG02132.hp2 HG02148.hp2 HG02165.hp1 HG02165.hp2 HG02273.hp2 HG02300.hp2 HG02622.hp1 HG02630.hp1 HG02683.hp2 HG02809.hp2 HG02818.hp1 HG02818.hp2 HG03017.hp1 HG03098.hp1 HG03139.hp2 HG03195.hp1 HG03225.hp1 HG03831.hp1 HG03831.hp2 HG03927.hp1 HG04199.hp1 HG04228.hp2 NA18612.hp2 NA18906.hp2 NA18939.hp1 NA18944.hp1 NA18944.hp2 NA18945.hp2 NA18946.hp2 NA18948.hp1 NA18948.hp2 NA18949.hp1 NA18950.hp1 NA18951.hp1 NA18951.hp2 NA18953.hp1 NA18954.hp2 NA18959.hp1 NA18960.hp1 NA18960.hp2 NA18961.hp1 NA18961.hp2 NA18963.hp2 NA18965.hp2 NA18969.hp1 NA18970.hp1 NA18970.hp2 NA18971.hp1 NA18971.hp2 NA18972.hp1 NA18972.hp2 NA18973.hp1 NA18973.hp2 NA18977.hp1 NA18977.hp2 NA18980.hp2 NA18981.hp1 NA18981.hp2 NA18983.hp2 NA18986.hp1 NA18986.hp2 NA18988.hp2 NA18990.hp1 NA18991.hp1 NA18992.hp1 NA18992.hp2 NA18994.hp2 NA18997.hp1 NA18997.hp2 NA18998.hp1 NA18998.hp2 NA18999.hp2 NA19000.hp2 NA19001.hp2 NA19003.hp1 NA19003.hp2 NA19004.hp1 NA19005.hp1 NA19006.hp2 NA19007.hp1 NA19007.hp2 NA19009.hp1 NA19011.hp2 NA19054.hp1 NA19055.hp1 NA19055.hp2 NA19056.hp2 NA19058.hp1 NA19062.hp1 NA19062.hp2 NA19063.hp1 NA19063.hp2 NA19064.hp1 NA19065.hp1 NA19065.hp2 NA19066.hp2 NA19067.hp2 NA19068.hp2 NA19070.hp1 NA19070.hp2 NA19074.hp1 NA19074.hp2 NA19075.hp2 NA19076.hp1 NA19076.hp2 NA19079.hp1 NA19079.hp2 NA19080.hp1 NA19080.hp2 NA19081.hp2 NA19083.hp1 NA19084.hp2 NA19085.hp1 NA19086.hp1 NA19086.hp2 NA19088.hp1 NA19088.hp2 NA19089.hp1 NA19089.hp2 NA19091.hp2 NA20129.hp2 NA20300.hp1 NA20300.hp2 NA20752.hp2 homoSapiens_chm13v2.hp1	intron_variant	MODIFIER	c.153-1240C>G c.153-1240C>G	CPT2	ENSG00000157184.7	transcript	ENST00000371486.4	protein_coding	1/4		chr1	53199479
chr1:53199493	C C	G G	3	a0001c0001t0001g0008 a0001c0001t0001g0010 a0001c0001t0001g0075 a0001c0001t0001g0008 a0001c0001t0001g0010 a0001c0001t0001g0075	20	HG00642.hp1 HG01243.hp1 HG01884.hp2 others(17): Show HG00642.hp1 HG01243.hp1 HG01884.hp2 HG01891.hp1 HG02109.hp1 HG02258.hp2 HG02451.hp2 HG02572.hp1 HG02572.hp2 HG02622.hp2 HG02809.hp1 HG02896.hp1 HG02897.hp1 HG02922.hp1 HG02965.hp1 HG03225.hp2 HG03471.hp2 HG03516.hp1 HG03579.hp2 NA19240.hp1	intron_variant	MODIFIER	c.153-1226C>G c.153-1226C>G	CPT2	ENSG00000157184.7	transcript	ENST00000371486.4	protein_coding	1/4		chr1	53199493
chr1:53199684	G G	T T	1	a0004c0004t0001g0093 a0004c0004t0001g0093	1	NA19086.hp1 NA19086.hp1	intron_variant	MODIFIER	c.153-1035G>T c.153-1035G>T	CPT2	ENSG00000157184.7	transcript	ENST00000371486.4	protein_coding	1/4		chr1	53199684
chr1:53199827	AT AT	A A	2	a0002c0002t0001g0035 a0002c0002t0001g0105 a0002c0002t0001g0035 a0002c0002t0001g0105	3	NA18970.hp1 NA18973.hp2 NA18986.hp2 NA18970.hp1 NA18973.hp2 NA18986.hp2	intron_variant	MODIFIER	c.153-891delT c.153-891delT	CPT2	ENSG00000157184.7	transcript	ENST00000371486.4	protein_coding	1/4		chr1	53199827
chr1:53199940	G G	A A	70	a0001c0001t0001g0009 a0001c0001t0001g0021 a0001c0001t0001g0026 others(67): Show a0001c0001t0001g0009 a0001c0001t0001g0021 a0001c0001t0001g0026 a0001c0001t0001g0042 a0001c0001t0001g0044 a0001c0001t0001g0091 a0001c0001t0001g0092 a0001c0001t0001g0096 a0002c0002t0001g0001 a0002c0002t0001g0014 a0002c0002t0001g0019 a0002c0002t0001g0022 a0002c0002t0001g0023 a0002c0002t0001g0024 a0002c0002t0001g0034 a0002c0002t0001g0035 a0002c0002t0001g0036 a0002c0002t0001g0076 a0002c0002t0001g0080 a0002c0002t0001g0084 a0002c0002t0001g0104 a0002c0002t0001g0105 a0002c0002t0001g0106 a0002c0002t0001g0107 a0002c0002t0001g0108 a0002c0002t0001g0109 a0002c0002t0001g0110 a0002c0002t0001g0111 a0002c0002t0001g0112 a0002c0002t0001g0113 a0002c0002t0001g0114 a0002c0007t0001g0001 a0002c0010t0001g0001 a0002c0017t0001g0001 a0003c0003t0001g0005 a0003c0003t0001g0012 a0003c0003t0001g0032 a0003c0003t0001g0033 a0003c0003t0001g0082 a0003c0003t0001g0083 a0003c0003t0001g0085 a0003c0003t0001g0086 a0003c0003t0001g0087 a0003c0003t0001g0088 a0003c0003t0001g0089 a0003c0003t0001g0090 a0004c0004t0001g0007 a0004c0004t0001g0016 a0004c0004t0001g0025 a0004c0004t0001g0037 a0004c0004t0001g0038 a0004c0004t0001g0039 a0004c0004t0001g0040 a0004c0004t0001g0041 a0004c0004t0001g0077 a0004c0004t0001g0079 a0004c0004t0001g0081 a0004c0004t0001g0093 a0004c0004t0001g0099 a0004c0004t0001g0100 a0004c0004t0001g0101 a0004c0004t0001g0102 a0005c0008t0001g0031 a0006c0009t0001g0001 a0006c0009t0001g0023 a0007c0014t0001g0078 a0008c0012t0001g0025 a0009c0013t0001g0001 a0010c0011t0001g0001 a0012c0016t0001g0019	186	HG00140.hp2 HG00323.hp1 HG00323.hp2 others(183): Show HG00140.hp2 HG00323.hp1 HG00323.hp2 HG00408.hp2 HG00438.hp1 HG00438.hp2 HG00544.hp1 HG00544.hp2 HG00558.hp1 HG00558.hp2 HG00597.hp2 HG00741.hp2 HG01070.hp2 HG01071.hp1 HG01081.hp1 HG01081.hp2 HG01099.hp2 HG01106.hp2 HG01123.hp2 HG01167.hp1 HG01168.hp2 HG01169.hp2 HG01175.hp1 HG01243.hp2 HG01255.hp1 HG01255.hp2 HG01258.hp2 HG01346.hp1 HG01346.hp2 HG01358.hp1 HG01358.hp2 HG01361.hp2 HG01515.hp2 HG01975.hp2 HG02015.hp1 HG02015.hp2 HG02027.hp2 HG02040.hp1 HG02040.hp2 HG02055.hp1 HG02071.hp1 HG02074.hp2 HG02080.hp1 HG02083.hp1 HG02083.hp2 HG02109.hp2 HG02132.hp1 HG02132.hp2 HG02148.hp2 HG02165.hp1 HG02165.hp2 HG02273.hp2 HG02300.hp2 HG02622.hp1 HG02630.hp1 HG02683.hp2 HG02809.hp2 HG02818.hp1 HG02818.hp2 HG03017.hp1 HG03098.hp1 HG03139.hp2 HG03195.hp1 HG03225.hp1 HG03486.hp1 HG03831.hp1 HG03831.hp2 HG03927.hp1 HG04199.hp1 HG04228.hp1 HG04228.hp2 NA18612.hp2 NA18906.hp2 NA18939.hp1 NA18939.hp2 NA18942.hp1 NA18944.hp1 NA18944.hp2 NA18945.hp2 NA18946.hp2 NA18948.hp1 NA18948.hp2 NA18949.hp1 NA18949.hp2 NA18950.hp1 NA18951.hp1 NA18951.hp2 NA18953.hp1 NA18954.hp2 NA18959.hp1 NA18960.hp1 NA18960.hp2 NA18961.hp1 NA18961.hp2 NA18963.hp2 NA18965.hp2 NA18969.hp1 NA18970.hp1 NA18970.hp2 NA18971.hp1 NA18971.hp2 NA18972.hp1 NA18972.hp2 NA18973.hp1 NA18973.hp2 NA18977.hp1 NA18977.hp2 NA18980.hp1 NA18980.hp2 NA18981.hp1 NA18981.hp2 NA18982.hp1 NA18983.hp2 NA18986.hp1 NA18986.hp2 NA18988.hp2 NA18990.hp1 NA18991.hp1 NA18992.hp1 NA18992.hp2 NA18993.hp2 NA18994.hp2 NA18997.hp1 NA18997.hp2 NA18998.hp1 NA18998.hp2 NA18999.hp2 NA19000.hp2 NA19001.hp1 NA19001.hp2 NA19003.hp1 NA19003.hp2 NA19004.hp1 NA19005.hp1 NA19006.hp2 NA19007.hp1 NA19007.hp2 NA19009.hp1 NA19010.hp2 NA19011.hp1 NA19011.hp2 NA19054.hp1 NA19055.hp1 NA19055.hp2 NA19056.hp2 NA19058.hp1 NA19062.hp1 NA19062.hp2 NA19063.hp1 NA19063.hp2 NA19064.hp1 NA19065.hp1 NA19065.hp2 NA19066.hp2 NA19067.hp2 NA19068.hp2 NA19070.hp1 NA19070.hp2 NA19074.hp1 NA19074.hp2 NA19075.hp2 NA19076.hp1 NA19076.hp2 NA19079.hp1 NA19079.hp2 NA19080.hp1 NA19080.hp2 NA19081.hp2 NA19083.hp1 NA19083.hp2 NA19084.hp2 NA19085.hp1 NA19085.hp2 NA19086.hp1 NA19086.hp2 NA19088.hp1 NA19088.hp2 NA19089.hp1 NA19089.hp2 NA19091.hp1 NA19091.hp2 NA20129.hp2 NA20300.hp1 NA20300.hp2 NA20752.hp2 homoSapiens_chm13v2.hp1	intron_variant	MODIFIER	c.153-779G>A c.153-779G>A	CPT2	ENSG00000157184.7	transcript	ENST00000371486.4	protein_coding	1/4		chr1	53199940
chr1:53200167	A A	G G	1	a0001c0001t0001g0015 a0001c0001t0001g0015	4	NA18941.hp2 NA18991.hp2 NA19058.hp2 others(1): Show NA18941.hp2 NA18991.hp2 NA19058.hp2 NA19081.hp1	intron_variant	MODIFIER	c.153-552A>G c.153-552A>G	CPT2	ENSG00000157184.7	transcript	ENST00000371486.4	protein_coding	1/4		chr1	53200167
chr1:53200385	G G	A A	1	a0002c0002t0001g0076 a0002c0002t0001g0076	1	NA20300.hp1 NA20300.hp1	intron_variant	MODIFIER	c.153-334G>A c.153-334G>A	CPT2	ENSG00000157184.7	transcript	ENST00000371486.4	protein_coding	1/4		chr1	53200385
chr1:53200386	C C	T T	1	a0002c0002t0001g0076 a0002c0002t0001g0076	1	NA20300.hp1 NA20300.hp1	intron_variant	MODIFIER	c.153-333C>T c.153-333C>T	CPT2	ENSG00000157184.7	transcript	ENST00000371486.4	protein_coding	1/4		chr1	53200386
chr1:53200436	T T	C C	29	a0001c0001t0001g0026 a0001c0001t0001g0044 a0002c0002t0001g0001 others(26): Show a0001c0001t0001g0026 a0001c0001t0001g0044 a0002c0002t0001g0001 a0002c0002t0001g0014 a0002c0002t0001g0022 a0002c0002t0001g0023 a0002c0002t0001g0024 a0002c0002t0001g0034 a0002c0002t0001g0035 a0002c0002t0001g0036 a0002c0002t0001g0104 a0002c0002t0001g0105 a0002c0002t0001g0106 a0002c0002t0001g0107 a0002c0002t0001g0108 a0002c0002t0001g0109 a0002c0002t0001g0110 a0002c0002t0001g0111 a0002c0002t0001g0112 a0002c0002t0001g0113 a0002c0002t0001g0114 a0002c0007t0001g0001 a0002c0010t0001g0001 a0002c0017t0001g0001 a0004c0004t0001g0077 a0006c0009t0001g0001 a0006c0009t0001g0023 a0009c0013t0001g0001 a0010c0011t0001g0001	88	HG00140.hp2 HG00323.hp1 HG00323.hp2 others(85): Show HG00140.hp2 HG00323.hp1 HG00323.hp2 HG00438.hp1 HG00544.hp1 HG00558.hp2 HG00597.hp2 HG01070.hp2 HG01071.hp1 HG01081.hp1 HG01099.hp2 HG01123.hp2 HG01175.hp1 HG01243.hp2 HG01255.hp2 HG01258.hp2 HG01346.hp2 HG01358.hp1 HG01361.hp2 HG01515.hp2 HG02015.hp1 HG02040.hp1 HG02080.hp1 HG02083.hp1 HG02109.hp2 HG02132.hp1 HG02148.hp2 HG02165.hp2 HG02273.hp2 HG03017.hp1 HG03195.hp1 HG03831.hp2 HG03927.hp1 HG04199.hp1 NA18939.hp1 NA18944.hp1 NA18944.hp2 NA18948.hp1 NA18948.hp2 NA18949.hp1 NA18949.hp2 NA18951.hp2 NA18954.hp2 NA18959.hp1 NA18960.hp1 NA18961.hp1 NA18961.hp2 NA18969.hp1 NA18970.hp1 NA18973.hp2 NA18977.hp1 NA18980.hp2 NA18981.hp2 NA18982.hp1 NA18983.hp2 NA18986.hp2 NA18990.hp1 NA18991.hp1 NA18992.hp1 NA18994.hp2 NA18997.hp1 NA18998.hp2 NA18999.hp2 NA19000.hp2 NA19001.hp2 NA19003.hp1 NA19006.hp2 NA19007.hp2 NA19009.hp1 NA19011.hp2 NA19055.hp1 NA19056.hp2 NA19062.hp1 NA19065.hp1 NA19067.hp2 NA19070.hp1 NA19076.hp2 NA19079.hp1 NA19079.hp2 NA19080.hp1 NA19083.hp1 NA19085.hp1 NA19086.hp2 NA19088.hp1 NA19088.hp2 NA19089.hp1 NA20752.hp2 homoSapiens_chm13v2.hp1	intron_variant	MODIFIER	c.153-283T>C c.153-283T>C	CPT2	ENSG00000157184.7	transcript	ENST00000371486.4	protein_coding	1/4		chr1	53200436
chr1:53200543	G G	A A	1	a0001c0001t0001g0103 a0001c0001t0001g0103	1	HG03453.hp1 HG03453.hp1	intron_variant	MODIFIER	c.153-176G>A c.153-176G>A	CPT2	ENSG00000157184.7	transcript	ENST00000371486.4	protein_coding	1/4		chr1	53200543
chr1:53200716	C C	A A	1	a0004c0004t0001g0093 a0004c0004t0001g0093	1	NA19086.hp1 NA19086.hp1	splice_region_variant&intron_variant	LOW	c.153-3C>A c.153-3C>A	CPT2	ENSG00000157184.7	transcript	ENST00000371486.4	protein_coding	1/4		chr1	53200716
chr1:53201111	G G	C C	1	a0001c0001t0001g0045 a0001c0001t0001g0045	1	HG01884.hp1 HG01884.hp1	intron_variant	MODIFIER	c.233+312G>C c.233+312G>C	CPT2	ENSG00000157184.7	transcript	ENST00000371486.4	protein_coding	2/4		chr1	53201111
chr1:53201206	C C	T T	18	a0001c0001t0001g0004 a0001c0001t0001g0011 a0001c0001t0001g0013 others(15): Show a0001c0001t0001g0004 a0001c0001t0001g0011 a0001c0001t0001g0013 a0001c0001t0001g0018 a0001c0001t0001g0029 a0001c0001t0001g0030 a0001c0001t0001g0043 a0001c0001t0001g0045 a0001c0001t0001g0068 a0001c0001t0001g0069 a0001c0001t0001g0070 a0001c0001t0001g0071 a0001c0001t0001g0073 a0001c0001t0001g0074 a0001c0001t0001g0098 a0001c0006t0001g0004 a0001c0006t0001g0072 a0011c0015t0001g0004	52	HG00639.hp2 HG00735.hp1 HG00741.hp1 others(49): Show HG00639.hp2 HG00735.hp1 HG00741.hp1 HG01074.hp2 HG01168.hp1 HG01169.hp1 HG01192.hp1 HG01433.hp2 HG01884.hp1 HG01943.hp2 HG01993.hp2 HG02027.hp1 HG02055.hp2 HG02071.hp2 HG02145.hp2 HG02257.hp1 HG02257.hp2 HG02258.hp1 HG02280.hp1 HG02280.hp2 HG02559.hp2 HG02602.hp2 HG02615.hp1 HG02647.hp1 HG02723.hp1 HG02735.hp1 HG02735.hp2 HG02895.hp1 HG02895.hp2 HG02896.hp2 HG02897.hp2 HG03041.hp1 HG03130.hp2 HG03209.hp2 HG03492.hp1 HG03516.hp2 HG03540.hp1 HG03540.hp2 HG03579.hp1 HG03688.hp2 HG04115.hp1 HG04115.hp2 HG04199.hp2 HG04204.hp2 HG06807.hp1 HG06807.hp2 NA18522.hp1 NA18612.hp1 NA19004.hp2 NA19010.hp1 NA19043.hp2 NA19084.hp1	intron_variant	MODIFIER	c.233+407C>T c.233+407C>T	CPT2	ENSG00000157184.7	transcript	ENST00000371486.4	protein_coding	2/4		chr1	53201206
chr1:53201293	T T	G G	70	a0001c0001t0001g0009 a0001c0001t0001g0021 a0001c0001t0001g0026 others(67): Show a0001c0001t0001g0009 a0001c0001t0001g0021 a0001c0001t0001g0026 a0001c0001t0001g0042 a0001c0001t0001g0044 a0001c0001t0001g0091 a0001c0001t0001g0092 a0001c0001t0001g0096 a0002c0002t0001g0001 a0002c0002t0001g0014 a0002c0002t0001g0019 a0002c0002t0001g0022 a0002c0002t0001g0023 a0002c0002t0001g0024 a0002c0002t0001g0034 a0002c0002t0001g0035 a0002c0002t0001g0036 a0002c0002t0001g0076 a0002c0002t0001g0080 a0002c0002t0001g0084 a0002c0002t0001g0104 a0002c0002t0001g0105 a0002c0002t0001g0106 a0002c0002t0001g0107 a0002c0002t0001g0108 a0002c0002t0001g0109 a0002c0002t0001g0110 a0002c0002t0001g0111 a0002c0002t0001g0112 a0002c0002t0001g0113 a0002c0002t0001g0114 a0002c0007t0001g0001 a0002c0010t0001g0001 a0002c0017t0001g0001 a0003c0003t0001g0005 a0003c0003t0001g0012 a0003c0003t0001g0032 a0003c0003t0001g0033 a0003c0003t0001g0082 a0003c0003t0001g0083 a0003c0003t0001g0085 a0003c0003t0001g0086 a0003c0003t0001g0087 a0003c0003t0001g0088 a0003c0003t0001g0089 a0003c0003t0001g0090 a0004c0004t0001g0007 a0004c0004t0001g0016 a0004c0004t0001g0025 a0004c0004t0001g0037 a0004c0004t0001g0038 a0004c0004t0001g0039 a0004c0004t0001g0040 a0004c0004t0001g0041 a0004c0004t0001g0077 a0004c0004t0001g0079 a0004c0004t0001g0081 a0004c0004t0001g0093 a0004c0004t0001g0099 a0004c0004t0001g0100 a0004c0004t0001g0101 a0004c0004t0001g0102 a0005c0008t0001g0031 a0006c0009t0001g0001 a0006c0009t0001g0023 a0007c0014t0001g0078 a0008c0012t0001g0025 a0009c0013t0001g0001 a0010c0011t0001g0001 a0012c0016t0001g0019	186	HG00140.hp2 HG00323.hp1 HG00323.hp2 others(183): Show HG00140.hp2 HG00323.hp1 HG00323.hp2 HG00408.hp2 HG00438.hp1 HG00438.hp2 HG00544.hp1 HG00544.hp2 HG00558.hp1 HG00558.hp2 HG00597.hp2 HG00741.hp2 HG01070.hp2 HG01071.hp1 HG01081.hp1 HG01081.hp2 HG01099.hp2 HG01106.hp2 HG01123.hp2 HG01167.hp1 HG01168.hp2 HG01169.hp2 HG01175.hp1 HG01243.hp2 HG01255.hp1 HG01255.hp2 HG01258.hp2 HG01346.hp1 HG01346.hp2 HG01358.hp1 HG01358.hp2 HG01361.hp2 HG01515.hp2 HG01975.hp2 HG02015.hp1 HG02015.hp2 HG02027.hp2 HG02040.hp1 HG02040.hp2 HG02055.hp1 HG02071.hp1 HG02074.hp2 HG02080.hp1 HG02083.hp1 HG02083.hp2 HG02109.hp2 HG02132.hp1 HG02132.hp2 HG02148.hp2 HG02165.hp1 HG02165.hp2 HG02273.hp2 HG02300.hp2 HG02622.hp1 HG02630.hp1 HG02683.hp2 HG02809.hp2 HG02818.hp1 HG02818.hp2 HG03017.hp1 HG03098.hp1 HG03139.hp2 HG03195.hp1 HG03225.hp1 HG03486.hp1 HG03831.hp1 HG03831.hp2 HG03927.hp1 HG04199.hp1 HG04228.hp1 HG04228.hp2 NA18612.hp2 NA18906.hp2 NA18939.hp1 NA18939.hp2 NA18942.hp1 NA18944.hp1 NA18944.hp2 NA18945.hp2 NA18946.hp2 NA18948.hp1 NA18948.hp2 NA18949.hp1 NA18949.hp2 NA18950.hp1 NA18951.hp1 NA18951.hp2 NA18953.hp1 NA18954.hp2 NA18959.hp1 NA18960.hp1 NA18960.hp2 NA18961.hp1 NA18961.hp2 NA18963.hp2 NA18965.hp2 NA18969.hp1 NA18970.hp1 NA18970.hp2 NA18971.hp1 NA18971.hp2 NA18972.hp1 NA18972.hp2 NA18973.hp1 NA18973.hp2 NA18977.hp1 NA18977.hp2 NA18980.hp1 NA18980.hp2 NA18981.hp1 NA18981.hp2 NA18982.hp1 NA18983.hp2 NA18986.hp1 NA18986.hp2 NA18988.hp2 NA18990.hp1 NA18991.hp1 NA18992.hp1 NA18992.hp2 NA18993.hp2 NA18994.hp2 NA18997.hp1 NA18997.hp2 NA18998.hp1 NA18998.hp2 NA18999.hp2 NA19000.hp2 NA19001.hp1 NA19001.hp2 NA19003.hp1 NA19003.hp2 NA19004.hp1 NA19005.hp1 NA19006.hp2 NA19007.hp1 NA19007.hp2 NA19009.hp1 NA19010.hp2 NA19011.hp1 NA19011.hp2 NA19054.hp1 NA19055.hp1 NA19055.hp2 NA19056.hp2 NA19058.hp1 NA19062.hp1 NA19062.hp2 NA19063.hp1 NA19063.hp2 NA19064.hp1 NA19065.hp1 NA19065.hp2 NA19066.hp2 NA19067.hp2 NA19068.hp2 NA19070.hp1 NA19070.hp2 NA19074.hp1 NA19074.hp2 NA19075.hp2 NA19076.hp1 NA19076.hp2 NA19079.hp1 NA19079.hp2 NA19080.hp1 NA19080.hp2 NA19081.hp2 NA19083.hp1 NA19083.hp2 NA19084.hp2 NA19085.hp1 NA19085.hp2 NA19086.hp1 NA19086.hp2 NA19088.hp1 NA19088.hp2 NA19089.hp1 NA19089.hp2 NA19091.hp1 NA19091.hp2 NA20129.hp2 NA20300.hp1 NA20300.hp2 NA20752.hp2 homoSapiens_chm13v2.hp1	intron_variant	MODIFIER	c.233+494T>G c.233+494T>G	CPT2	ENSG00000157184.7	transcript	ENST00000371486.4	protein_coding	2/4		chr1	53201293
chr1:53201311	A A	G G	2	a0001c0001t0001g0091 a0001c0001t0001g0092 a0001c0001t0001g0091 a0001c0001t0001g0092	2	HG02622.hp1 HG02809.hp2 HG02622.hp1 HG02809.hp2	intron_variant	MODIFIER	c.233+512A>G c.233+512A>G	CPT2	ENSG00000157184.7	transcript	ENST00000371486.4	protein_coding	2/4		chr1	53201311
chr1:53201459	T T	C C	1	a0001c0001t0001g0046 a0001c0001t0001g0046	1	HG04184.hp1 HG04184.hp1	intron_variant	MODIFIER	c.233+660T>C c.233+660T>C	CPT2	ENSG00000157184.7	transcript	ENST00000371486.4	protein_coding	2/4		chr1	53201459
chr1:53201537	A A	G G	15	a0002c0002t0001g0019 a0002c0002t0001g0084 a0003c0003t0001g0005 others(12): Show a0002c0002t0001g0019 a0002c0002t0001g0084 a0003c0003t0001g0005 a0003c0003t0001g0012 a0003c0003t0001g0032 a0003c0003t0001g0033 a0003c0003t0001g0082 a0003c0003t0001g0083 a0003c0003t0001g0085 a0003c0003t0001g0086 a0003c0003t0001g0087 a0003c0003t0001g0088 a0003c0003t0001g0089 a0003c0003t0001g0090 a0012c0016t0001g0019	43	HG00741.hp2 HG01255.hp1 HG01975.hp2 others(40): Show HG00741.hp2 HG01255.hp1 HG01975.hp2 HG02027.hp2 HG02055.hp1 HG02071.hp1 HG02074.hp2 HG02132.hp2 HG02818.hp1 HG03225.hp1 NA18612.hp2 NA18906.hp2 NA18945.hp2 NA18946.hp2 NA18950.hp1 NA18951.hp1 NA18953.hp1 NA18960.hp2 NA18971.hp2 NA18972.hp2 NA18977.hp2 NA18981.hp1 NA18986.hp1 NA18988.hp2 NA18992.hp2 NA18997.hp2 NA19003.hp2 NA19054.hp1 NA19055.hp2 NA19058.hp1 NA19062.hp2 NA19063.hp1 NA19063.hp2 NA19064.hp1 NA19065.hp2 NA19066.hp2 NA19068.hp2 NA19070.hp2 NA19074.hp1 NA19076.hp1 NA19080.hp2 NA19084.hp2 NA19091.hp2	intron_variant	MODIFIER	c.233+738A>G c.233+738A>G	CPT2	ENSG00000157184.7	transcript	ENST00000371486.4	protein_coding	2/4		chr1	53201537
chr1:53201542	T T	C C	1	a0001c0001t0001g0042 a0001c0001t0001g0042	1	HG03486.hp1 HG03486.hp1	intron_variant	MODIFIER	c.233+743T>C c.233+743T>C	CPT2	ENSG00000157184.7	transcript	ENST00000371486.4	protein_coding	2/4		chr1	53201542
chr1:53201791	G G	A A	1	a0001c0001t0001g0047 a0001c0001t0001g0047	1	HG02293.hp2 HG02293.hp2	intron_variant	MODIFIER	c.234-532G>A c.234-532G>A	CPT2	ENSG00000157184.7	transcript	ENST00000371486.4	protein_coding	2/4		chr1	53201791
chr1:53201842	G G	A A	1	a0001c0001t0001g0048 a0001c0001t0001g0048	1	HG02717.hp1 HG02717.hp1	intron_variant	MODIFIER	c.234-481G>A c.234-481G>A	CPT2	ENSG00000157184.7	transcript	ENST00000371486.4	protein_coding	2/4		chr1	53201842
chr1:53202230	G G	T T	1	a0004c0004t0001g0093 a0004c0004t0001g0093	1	NA19086.hp1 NA19086.hp1	intron_variant	MODIFIER	c.234-93G>T c.234-93G>T	CPT2	ENSG00000157184.7	transcript	ENST00000371486.4	protein_coding	2/4		chr1	53202230
chr1:53202257	G G	T T	1	a0001c0001t0001g0067 a0001c0001t0001g0067	1	HG01167.hp2 HG01167.hp2	intron_variant	MODIFIER	c.234-66G>T c.234-66G>T	CPT2	ENSG00000157184.7	transcript	ENST00000371486.4	protein_coding	2/4		chr1	53202257
chr1:53202549	C C	T T	3	a0001c0001t0001g0008 a0001c0001t0001g0010 a0001c0001t0001g0075 a0001c0001t0001g0008 a0001c0001t0001g0010 a0001c0001t0001g0075	20	HG00642.hp1 HG01243.hp1 HG01884.hp2 others(17): Show HG00642.hp1 HG01243.hp1 HG01884.hp2 HG01891.hp1 HG02109.hp1 HG02258.hp2 HG02451.hp2 HG02572.hp1 HG02572.hp2 HG02622.hp2 HG02809.hp1 HG02896.hp1 HG02897.hp1 HG02922.hp1 HG02965.hp1 HG03225.hp2 HG03471.hp2 HG03516.hp1 HG03579.hp2 NA19240.hp1	intron_variant	MODIFIER	c.340+120C>T c.340+120C>T	CPT2	ENSG00000157184.7	transcript	ENST00000371486.4	protein_coding	3/4		chr1	53202549
chr1:53202551	T T	A A	2	a0001c0001t0001g0011 a0001c0001t0001g0013 a0001c0001t0001g0011 a0001c0001t0001g0013	11	HG01943.hp2 HG02257.hp2 HG02280.hp2 others(8): Show HG01943.hp2 HG02257.hp2 HG02280.hp2 HG02559.hp2 HG02723.hp1 HG02895.hp2 HG02897.hp2 HG03540.hp2 HG03579.hp1 HG06807.hp2 NA19043.hp2	intron_variant	MODIFIER	c.340+122T>A c.340+122T>A	CPT2	ENSG00000157184.7	transcript	ENST00000371486.4	protein_coding	3/4		chr1	53202551
chr1:53202787	C C	T T	1	a0003c0003t0001g0090 a0003c0003t0001g0090	1	NA19068.hp2 NA19068.hp2	intron_variant	MODIFIER	c.340+358C>T c.340+358C>T	CPT2	ENSG00000157184.7	transcript	ENST00000371486.4	protein_coding	3/4		chr1	53202787
chr1:53202816	C C	T T	1	a0001c0001t0001g0066 a0001c0001t0001g0066	1	HG01516.hp2 HG01516.hp2	intron_variant	MODIFIER	c.340+387C>T c.340+387C>T	CPT2	ENSG00000157184.7	transcript	ENST00000371486.4	protein_coding	3/4		chr1	53202816
chr1:53202849	T T	C C	2	a0001c0001t0001g0091 a0001c0001t0001g0092 a0001c0001t0001g0091 a0001c0001t0001g0092	2	HG02622.hp1 HG02809.hp2 HG02622.hp1 HG02809.hp2	intron_variant	MODIFIER	c.340+420T>C c.340+420T>C	CPT2	ENSG00000157184.7	transcript	ENST00000371486.4	protein_coding	3/4		chr1	53202849
chr1:53202920	G G	C C	1	a0001c0001t0001g0042 a0001c0001t0001g0042	1	HG03486.hp1 HG03486.hp1	intron_variant	MODIFIER	c.340+491G>C c.340+491G>C	CPT2	ENSG00000157184.7	transcript	ENST00000371486.4	protein_coding	3/4		chr1	53202920
chr1:53203029	A A	G G	1	a0001c0001t0001g0042 a0001c0001t0001g0042	1	HG03486.hp1 HG03486.hp1	intron_variant	MODIFIER	c.340+600A>G c.340+600A>G	CPT2	ENSG00000157184.7	transcript	ENST00000371486.4	protein_coding	3/4		chr1	53203029
chr1:53203159	C C	T T	2	a0001c0001t0001g0008 a0001c0001t0001g0075 a0001c0001t0001g0008 a0001c0001t0001g0075	13	HG01243.hp1 HG01891.hp1 HG02109.hp1 others(10): Show HG01243.hp1 HG01891.hp1 HG02109.hp1 HG02258.hp2 HG02572.hp2 HG02809.hp1 HG02896.hp1 HG02897.hp1 HG02922.hp1 HG03225.hp2 HG03471.hp2 HG03516.hp1 HG03579.hp2	intron_variant	MODIFIER	c.340+730C>T c.340+730C>T	CPT2	ENSG00000157184.7	transcript	ENST00000371486.4	protein_coding	3/4		chr1	53203159
chr1:53203282	G G	A A	6	a0001c0001t0001g0006 a0001c0001t0001g0049 a0001c0001t0001g0050 others(3): Show a0001c0001t0001g0006 a0001c0001t0001g0049 a0001c0001t0001g0050 a0001c0005t0001g0006 a0001c0005t0001g0094 a0001c0005t0001g0097	21	HG00642.hp2 HG00735.hp2 HG01175.hp2 others(18): Show HG00642.hp2 HG00735.hp2 HG01175.hp2 HG01192.hp2 HG01891.hp2 HG02145.hp1 HG02451.hp1 HG02486.hp2 HG02615.hp2 HG02630.hp2 HG02723.hp2 HG02922.hp2 HG02965.hp2 HG03098.hp2 HG03139.hp1 HG03195.hp2 HG03453.hp2 HG03486.hp2 NA19043.hp1 NA19240.hp2 NA21309.hp2	intron_variant	MODIFIER	c.340+853G>A c.340+853G>A	CPT2	ENSG00000157184.7	transcript	ENST00000371486.4	protein_coding	3/4		chr1	53203282
chr1:53203319	A A	C C	1	a0002c0002t0001g0113 a0002c0002t0001g0113	1	NA19088.hp2 NA19088.hp2	intron_variant	MODIFIER	c.340+890A>C c.340+890A>C	CPT2	ENSG00000157184.7	transcript	ENST00000371486.4	protein_coding	3/4		chr1	53203319
chr1:53203351	A A	G G	1	a0001c0001t0001g0042 a0001c0001t0001g0042	1	HG03486.hp1 HG03486.hp1	intron_variant	MODIFIER	c.340+922A>G c.340+922A>G	CPT2	ENSG00000157184.7	transcript	ENST00000371486.4	protein_coding	3/4		chr1	53203351
chr1:53203355	T T	A A	1	a0004c0004t0001g0093 a0004c0004t0001g0093	1	NA19086.hp1 NA19086.hp1	intron_variant	MODIFIER	c.340+926T>A c.340+926T>A	CPT2	ENSG00000157184.7	transcript	ENST00000371486.4	protein_coding	3/4		chr1	53203355
chr1:53203370	T T	A A	1	a0004c0004t0001g0093 a0004c0004t0001g0093	1	NA19086.hp1 NA19086.hp1	intron_variant	MODIFIER	c.340+941T>A c.340+941T>A	CPT2	ENSG00000157184.7	transcript	ENST00000371486.4	protein_coding	3/4		chr1	53203370
chr1:53203498	C C	T T	2	a0001c0001t0001g0009 a0001c0001t0001g0096 a0001c0001t0001g0009 a0001c0001t0001g0096	10	HG02083.hp2 NA18939.hp2 NA18942.hp1 others(7): Show HG02083.hp2 NA18939.hp2 NA18942.hp1 NA18980.hp1 NA18993.hp2 NA19001.hp1 NA19010.hp2 NA19011.hp1 NA19085.hp2 NA19091.hp1	intron_variant	MODIFIER	c.340+1069C>T c.340+1069C>T	CPT2	ENSG00000157184.7	transcript	ENST00000371486.4	protein_coding	3/4		chr1	53203498
chr1:53203502	G G	A A	1	a0001c0001t0001g0043 a0001c0001t0001g0043	1	HG04204.hp2 HG04204.hp2	intron_variant	MODIFIER	c.340+1073G>A c.340+1073G>A	CPT2	ENSG00000157184.7	transcript	ENST00000371486.4	protein_coding	3/4		chr1	53203502
chr1:53203590	G G	C C	1	a0001c0001t0001g0042 a0001c0001t0001g0042	1	HG03486.hp1 HG03486.hp1	intron_variant	MODIFIER	c.340+1161G>C c.340+1161G>C	CPT2	ENSG00000157184.7	transcript	ENST00000371486.4	protein_coding	3/4		chr1	53203590
chr1:53203752	A A	G G	22	a0002c0002t0001g0019 a0002c0002t0001g0084 a0003c0003t0001g0005 others(19): Show a0002c0002t0001g0019 a0002c0002t0001g0084 a0003c0003t0001g0005 a0003c0003t0001g0012 a0003c0003t0001g0032 a0003c0003t0001g0033 a0003c0003t0001g0082 a0003c0003t0001g0083 a0003c0003t0001g0085 a0003c0003t0001g0086 a0003c0003t0001g0087 a0003c0003t0001g0088 a0003c0003t0001g0089 a0003c0003t0001g0090 a0004c0004t0001g0016 a0004c0004t0001g0081 a0004c0004t0001g0093 a0004c0004t0001g0099 a0004c0004t0001g0100 a0004c0004t0001g0101 a0004c0004t0001g0102 a0012c0016t0001g0019	53	HG00408.hp2 HG00544.hp2 HG00558.hp1 others(50): Show HG00408.hp2 HG00544.hp2 HG00558.hp1 HG00741.hp2 HG01255.hp1 HG01975.hp2 HG02027.hp2 HG02055.hp1 HG02071.hp1 HG02074.hp2 HG02132.hp2 HG02818.hp1 HG03225.hp1 NA18612.hp2 NA18906.hp2 NA18945.hp2 NA18946.hp2 NA18950.hp1 NA18951.hp1 NA18953.hp1 NA18960.hp2 NA18965.hp2 NA18970.hp2 NA18971.hp2 NA18972.hp1 NA18972.hp2 NA18973.hp1 NA18977.hp2 NA18981.hp1 NA18986.hp1 NA18988.hp2 NA18992.hp2 NA18997.hp2 NA18998.hp1 NA19003.hp2 NA19004.hp1 NA19054.hp1 NA19055.hp2 NA19058.hp1 NA19062.hp2 NA19063.hp1 NA19063.hp2 NA19064.hp1 NA19065.hp2 NA19066.hp2 NA19068.hp2 NA19070.hp2 NA19074.hp1 NA19076.hp1 NA19080.hp2 NA19084.hp2 NA19086.hp1 NA19091.hp2	intron_variant	MODIFIER	c.340+1323A>G c.340+1323A>G	CPT2	ENSG00000157184.7	transcript	ENST00000371486.4	protein_coding	3/4		chr1	53203752
chr1:53203775	CTT CTT	C C	4	a0001c0001t0001g0096 a0002c0002t0001g0014 a0002c0002t0001g0105 others(1): Show a0001c0001t0001g0096 a0002c0002t0001g0014 a0002c0002t0001g0105 a0005c0008t0001g0031	9	HG02165.hp2 HG02630.hp1 NA18942.hp1 others(6): Show HG02165.hp2 HG02630.hp1 NA18942.hp1 NA18951.hp2 NA18954.hp2 NA18959.hp1 NA18986.hp2 NA19055.hp1 NA20129.hp2	intron_variant	MODIFIER	c.340+1350_340+1351d others(4): Show c.340+1350_340+1351delTT	CPT2	ENSG00000157184.7	transcript	ENST00000371486.4	protein_coding	3/4	INFO_REALIGN_3_PRIME	chr1	53203775
chr1:53203778	T T	TC TC	18	a0002c0002t0001g0084 a0003c0003t0001g0005 a0003c0003t0001g0012 others(15): Show a0002c0002t0001g0084 a0003c0003t0001g0005 a0003c0003t0001g0012 a0003c0003t0001g0032 a0003c0003t0001g0033 a0003c0003t0001g0085 a0003c0003t0001g0086 a0003c0003t0001g0087 a0003c0003t0001g0088 a0003c0003t0001g0089 a0003c0003t0001g0090 a0004c0004t0001g0016 a0004c0004t0001g0081 a0004c0004t0001g0093 a0004c0004t0001g0099 a0004c0004t0001g0100 a0004c0004t0001g0101 a0004c0004t0001g0102	48	HG00408.hp2 HG00544.hp2 HG00558.hp1 others(45): Show HG00408.hp2 HG00544.hp2 HG00558.hp1 HG00741.hp2 HG01255.hp1 HG01975.hp2 HG02027.hp2 HG02071.hp1 HG02074.hp2 HG02132.hp2 HG02818.hp1 NA18612.hp2 NA18945.hp2 NA18946.hp2 NA18950.hp1 NA18953.hp1 NA18960.hp2 NA18965.hp2 NA18970.hp2 NA18971.hp2 NA18972.hp1 NA18972.hp2 NA18973.hp1 NA18977.hp2 NA18981.hp1 NA18986.hp1 NA18988.hp2 NA18992.hp2 NA18997.hp2 NA18998.hp1 NA19003.hp2 NA19004.hp1 NA19054.hp1 NA19058.hp1 NA19062.hp2 NA19063.hp1 NA19063.hp2 NA19064.hp1 NA19065.hp2 NA19066.hp2 NA19068.hp2 NA19070.hp2 NA19074.hp1 NA19076.hp1 NA19080.hp2 NA19084.hp2 NA19086.hp1 NA19091.hp2	intron_variant	MODIFIER	c.340+1349_340+1350i others(3): Show c.340+1349_340+1350insC	CPT2	ENSG00000157184.7	transcript	ENST00000371486.4	protein_coding	3/4		chr1	53203778
chr1:53203779	T T	C C	44	a0001c0001t0001g0009 a0001c0001t0001g0026 a0001c0001t0001g0044 others(41): Show a0001c0001t0001g0009 a0001c0001t0001g0026 a0001c0001t0001g0044 a0002c0002t0001g0001 a0002c0002t0001g0019 a0002c0002t0001g0022 a0002c0002t0001g0023 a0002c0002t0001g0024 a0002c0002t0001g0034 a0002c0002t0001g0035 a0002c0002t0001g0036 a0002c0002t0001g0076 a0002c0002t0001g0080 a0002c0002t0001g0104 a0002c0002t0001g0106 a0002c0002t0001g0107 a0002c0002t0001g0108 a0002c0002t0001g0109 a0002c0002t0001g0110 a0002c0002t0001g0111 a0002c0002t0001g0112 a0002c0002t0001g0113 a0002c0002t0001g0114 a0002c0007t0001g0001 a0002c0010t0001g0001 a0002c0017t0001g0001 a0003c0003t0001g0082 a0003c0003t0001g0083 a0004c0004t0001g0007 a0004c0004t0001g0025 a0004c0004t0001g0037 a0004c0004t0001g0038 a0004c0004t0001g0039 a0004c0004t0001g0040 a0004c0004t0001g0041 a0004c0004t0001g0077 a0004c0004t0001g0079 a0006c0009t0001g0001 a0006c0009t0001g0023 a0007c0014t0001g0078 a0008c0012t0001g0025 a0009c0013t0001g0001 a0010c0011t0001g0001 a0012c0016t0001g0019	123	HG00140.hp2 HG00323.hp1 HG00323.hp2 others(120): Show HG00140.hp2 HG00323.hp1 HG00323.hp2 HG00438.hp1 HG00438.hp2 HG00544.hp1 HG00558.hp2 HG00597.hp2 HG01070.hp2 HG01071.hp1 HG01081.hp1 HG01081.hp2 HG01099.hp2 HG01106.hp2 HG01123.hp2 HG01167.hp1 HG01168.hp2 HG01169.hp2 HG01175.hp1 HG01243.hp2 HG01255.hp2 HG01258.hp2 HG01346.hp1 HG01346.hp2 HG01358.hp1 HG01358.hp2 HG01361.hp2 HG01515.hp2 HG02015.hp1 HG02015.hp2 HG02040.hp1 HG02055.hp1 HG02080.hp1 HG02083.hp1 HG02083.hp2 HG02109.hp2 HG02132.hp1 HG02148.hp2 HG02165.hp1 HG02273.hp2 HG02300.hp2 HG02683.hp2 HG02818.hp2 HG03017.hp1 HG03098.hp1 HG03139.hp2 HG03195.hp1 HG03225.hp1 HG03831.hp1 HG03831.hp2 HG03927.hp1 HG04199.hp1 HG04228.hp2 NA18906.hp2 NA18939.hp1 NA18939.hp2 NA18944.hp1 NA18944.hp2 NA18948.hp1 NA18948.hp2 NA18949.hp1 NA18949.hp2 NA18951.hp1 NA18960.hp1 NA18961.hp1 NA18961.hp2 NA18963.hp2 NA18969.hp1 NA18970.hp1 NA18971.hp1 NA18973.hp2 NA18977.hp1 NA18980.hp1 NA18980.hp2 NA18981.hp2 NA18982.hp1 NA18983.hp2 NA18990.hp1 NA18991.hp1 NA18992.hp1 NA18993.hp2 NA18994.hp2 NA18997.hp1 NA18998.hp2 NA18999.hp2 NA19000.hp2 NA19001.hp1 NA19001.hp2 NA19003.hp1 NA19005.hp1 NA19006.hp2 NA19007.hp1 NA19007.hp2 NA19009.hp1 NA19010.hp2 NA19011.hp1 NA19011.hp2 NA19055.hp2 NA19056.hp2 NA19062.hp1 NA19065.hp1 NA19067.hp2 NA19070.hp1 NA19074.hp2 NA19075.hp2 NA19076.hp2 NA19079.hp1 NA19079.hp2 NA19080.hp1 NA19081.hp2 NA19083.hp1 NA19085.hp1 NA19085.hp2 NA19086.hp2 NA19088.hp1 NA19088.hp2 NA19089.hp1 NA19089.hp2 NA19091.hp1 NA20300.hp1 NA20300.hp2 NA20752.hp2 homoSapiens_chm13v2.hp1	intron_variant	MODIFIER	c.340+1350T>C c.340+1350T>C	CPT2	ENSG00000157184.7	transcript	ENST00000371486.4	protein_coding	3/4		chr1	53203779
chr1:53203780	TC TC	T T	37	a0001c0001t0001g0009 a0001c0001t0001g0021 a0001c0001t0001g0026 others(34): Show a0001c0001t0001g0009 a0001c0001t0001g0021 a0001c0001t0001g0026 a0001c0001t0001g0044 a0002c0002t0001g0001 a0002c0002t0001g0022 a0002c0002t0001g0023 a0002c0002t0001g0034 a0002c0002t0001g0035 a0002c0002t0001g0036 a0002c0002t0001g0080 a0002c0002t0001g0106 a0002c0002t0001g0107 a0002c0002t0001g0108 a0002c0002t0001g0109 a0002c0002t0001g0110 a0002c0002t0001g0111 a0002c0002t0001g0113 a0002c0002t0001g0114 a0002c0007t0001g0001 a0002c0010t0001g0001 a0002c0017t0001g0001 a0004c0004t0001g0007 a0004c0004t0001g0025 a0004c0004t0001g0037 a0004c0004t0001g0038 a0004c0004t0001g0039 a0004c0004t0001g0040 a0004c0004t0001g0041 a0004c0004t0001g0077 a0004c0004t0001g0079 a0006c0009t0001g0001 a0006c0009t0001g0023 a0007c0014t0001g0078 a0008c0012t0001g0025 a0009c0013t0001g0001 a0010c0011t0001g0001	115	HG00140.hp2 HG00323.hp1 HG00323.hp2 others(112): Show HG00140.hp2 HG00323.hp1 HG00323.hp2 HG00438.hp1 HG00438.hp2 HG00544.hp1 HG00558.hp2 HG00597.hp2 HG01070.hp2 HG01071.hp1 HG01081.hp1 HG01081.hp2 HG01099.hp2 HG01106.hp2 HG01123.hp2 HG01167.hp1 HG01168.hp2 HG01169.hp2 HG01175.hp1 HG01243.hp2 HG01255.hp2 HG01258.hp2 HG01346.hp1 HG01346.hp2 HG01358.hp1 HG01358.hp2 HG01361.hp2 HG01515.hp2 HG02015.hp1 HG02015.hp2 HG02040.hp1 HG02040.hp2 HG02080.hp1 HG02083.hp1 HG02083.hp2 HG02109.hp2 HG02132.hp1 HG02148.hp2 HG02165.hp1 HG02273.hp2 HG02300.hp2 HG02683.hp2 HG02818.hp2 HG03017.hp1 HG03098.hp1 HG03139.hp2 HG03195.hp1 HG03831.hp1 HG03831.hp2 HG03927.hp1 HG04199.hp1 HG04228.hp1 HG04228.hp2 NA18939.hp1 NA18939.hp2 NA18944.hp1 NA18944.hp2 NA18948.hp1 NA18948.hp2 NA18949.hp1 NA18949.hp2 NA18960.hp1 NA18961.hp1 NA18961.hp2 NA18963.hp2 NA18969.hp1 NA18970.hp1 NA18971.hp1 NA18973.hp2 NA18980.hp1 NA18982.hp1 NA18983.hp2 NA18990.hp1 NA18991.hp1 NA18992.hp1 NA18993.hp2 NA18994.hp2 NA18997.hp1 NA18999.hp2 NA19000.hp2 NA19001.hp1 NA19001.hp2 NA19003.hp1 NA19005.hp1 NA19006.hp2 NA19007.hp1 NA19007.hp2 NA19009.hp1 NA19010.hp2 NA19011.hp1 NA19011.hp2 NA19056.hp2 NA19062.hp1 NA19065.hp1 NA19067.hp2 NA19070.hp1 NA19074.hp2 NA19075.hp2 NA19076.hp2 NA19079.hp1 NA19079.hp2 NA19080.hp1 NA19081.hp2 NA19083.hp1 NA19083.hp2 NA19085.hp1 NA19085.hp2 NA19086.hp2 NA19088.hp2 NA19089.hp1 NA19089.hp2 NA19091.hp1 NA20300.hp2 NA20752.hp2 homoSapiens_chm13v2.hp1	intron_variant	MODIFIER	c.340+1352delC c.340+1352delC	CPT2	ENSG00000157184.7	transcript	ENST00000371486.4	protein_coding	3/4		chr1	53203780
chr1:53203781	C C	CT CT	18	a0001c0001t0001g0004 a0001c0001t0001g0011 a0001c0001t0001g0013 others(15): Show a0001c0001t0001g0004 a0001c0001t0001g0011 a0001c0001t0001g0013 a0001c0001t0001g0029 a0001c0001t0001g0030 a0001c0001t0001g0043 a0001c0001t0001g0045 a0001c0001t0001g0065 a0001c0001t0001g0068 a0001c0001t0001g0069 a0001c0001t0001g0070 a0001c0001t0001g0071 a0001c0001t0001g0073 a0001c0001t0001g0074 a0001c0001t0001g0098 a0001c0006t0001g0004 a0001c0006t0001g0072 a0011c0015t0001g0004	50	HG00639.hp2 HG00735.hp1 HG00741.hp1 others(47): Show HG00639.hp2 HG00735.hp1 HG00741.hp1 HG01074.hp2 HG01169.hp1 HG01192.hp1 HG01433.hp2 HG01516.hp1 HG01884.hp1 HG01943.hp2 HG01993.hp2 HG02027.hp1 HG02055.hp2 HG02071.hp2 HG02145.hp2 HG02257.hp1 HG02257.hp2 HG02258.hp1 HG02280.hp2 HG02559.hp2 HG02602.hp2 HG02647.hp1 HG02723.hp1 HG02735.hp1 HG02735.hp2 HG02895.hp1 HG02895.hp2 HG02896.hp2 HG02897.hp2 HG03041.hp1 HG03130.hp2 HG03209.hp2 HG03492.hp1 HG03516.hp2 HG03540.hp1 HG03540.hp2 HG03579.hp1 HG03688.hp2 HG04115.hp1 HG04115.hp2 HG04199.hp2 HG04204.hp2 HG06807.hp1 HG06807.hp2 NA18522.hp1 NA18612.hp1 NA19004.hp2 NA19010.hp1 NA19043.hp2 NA19084.hp1	intron_variant	MODIFIER	c.340+1367dupT c.340+1367dupT	CPT2	ENSG00000157184.7	transcript	ENST00000371486.4	protein_coding	3/4	INFO_REALIGN_3_PRIME	chr1	53203781
chr1:53203781	C C	T T	26	a0002c0002t0001g0019 a0002c0002t0001g0024 a0002c0002t0001g0076 others(23): Show a0002c0002t0001g0019 a0002c0002t0001g0024 a0002c0002t0001g0076 a0002c0002t0001g0084 a0002c0002t0001g0104 a0002c0002t0001g0112 a0003c0003t0001g0005 a0003c0003t0001g0012 a0003c0003t0001g0032 a0003c0003t0001g0033 a0003c0003t0001g0082 a0003c0003t0001g0083 a0003c0003t0001g0085 a0003c0003t0001g0086 a0003c0003t0001g0087 a0003c0003t0001g0088 a0003c0003t0001g0089 a0003c0003t0001g0090 a0004c0004t0001g0016 a0004c0004t0001g0081 a0004c0004t0001g0093 a0004c0004t0001g0099 a0004c0004t0001g0100 a0004c0004t0001g0101 a0004c0004t0001g0102 a0012c0016t0001g0019	59	HG00408.hp2 HG00544.hp2 HG00558.hp1 others(56): Show HG00408.hp2 HG00544.hp2 HG00558.hp1 HG00741.hp2 HG01255.hp1 HG01975.hp2 HG02027.hp2 HG02055.hp1 HG02071.hp1 HG02074.hp2 HG02132.hp2 HG02818.hp1 HG03225.hp1 NA18612.hp2 NA18906.hp2 NA18945.hp2 NA18946.hp2 NA18950.hp1 NA18951.hp1 NA18953.hp1 NA18960.hp2 NA18965.hp2 NA18970.hp2 NA18971.hp2 NA18972.hp1 NA18972.hp2 NA18973.hp1 NA18977.hp1 NA18977.hp2 NA18980.hp2 NA18981.hp1 NA18981.hp2 NA18986.hp1 NA18988.hp2 NA18992.hp2 NA18997.hp2 NA18998.hp1 NA18998.hp2 NA19003.hp2 NA19004.hp1 NA19054.hp1 NA19055.hp2 NA19058.hp1 NA19062.hp2 NA19063.hp1 NA19063.hp2 NA19064.hp1 NA19065.hp2 NA19066.hp2 NA19068.hp2 NA19070.hp2 NA19074.hp1 NA19076.hp1 NA19080.hp2 NA19084.hp2 NA19086.hp1 NA19088.hp1 NA19091.hp2 NA20300.hp1	intron_variant	MODIFIER	c.340+1352C>T c.340+1352C>T	CPT2	ENSG00000157184.7	transcript	ENST00000371486.4	protein_coding	3/4		chr1	53203781
chr1:53203933	G G	T T	2	a0001c0001t0001g0011 a0001c0001t0001g0013 a0001c0001t0001g0011 a0001c0001t0001g0013	11	HG01943.hp2 HG02257.hp2 HG02280.hp2 others(8): Show HG01943.hp2 HG02257.hp2 HG02280.hp2 HG02559.hp2 HG02723.hp1 HG02895.hp2 HG02897.hp2 HG03540.hp2 HG03579.hp1 HG06807.hp2 NA19043.hp2	intron_variant	MODIFIER	c.340+1504G>T c.340+1504G>T	CPT2	ENSG00000157184.7	transcript	ENST00000371486.4	protein_coding	3/4		chr1	53203933
chr1:53204258	TA TA	T T	5	a0001c0001t0001g0006 a0001c0001t0001g0050 a0001c0005t0001g0006 others(2): Show a0001c0001t0001g0006 a0001c0001t0001g0050 a0001c0005t0001g0006 a0001c0005t0001g0094 a0001c0005t0001g0097	20	HG00642.hp2 HG00735.hp2 HG01175.hp2 others(17): Show HG00642.hp2 HG00735.hp2 HG01175.hp2 HG01192.hp2 HG01891.hp2 HG02145.hp1 HG02451.hp1 HG02486.hp2 HG02615.hp2 HG02630.hp2 HG02723.hp2 HG02922.hp2 HG02965.hp2 HG03098.hp2 HG03139.hp1 HG03195.hp2 HG03453.hp2 HG03486.hp2 NA19240.hp2 NA21309.hp2	intron_variant	MODIFIER	c.340+1831delA c.340+1831delA	CPT2	ENSG00000157184.7	transcript	ENST00000371486.4	protein_coding	3/4	INFO_REALIGN_3_PRIME	chr1	53204258
chr1:53204662	C C	A A	1	a0002c0002t0001g0106 a0002c0002t0001g0106	1	NA19076.hp2 NA19076.hp2	intron_variant	MODIFIER	c.340+2233C>A c.340+2233C>A	CPT2	ENSG00000157184.7	transcript	ENST00000371486.4	protein_coding	3/4		chr1	53204662
chr1:53204701	A A	C C	1	a0001c0001t0001g0042 a0001c0001t0001g0042	1	HG03486.hp1 HG03486.hp1	intron_variant	MODIFIER	c.340+2272A>C c.340+2272A>C	CPT2	ENSG00000157184.7	transcript	ENST00000371486.4	protein_coding	3/4		chr1	53204701
chr1:53204721	T T	C C	1	a0001c0001t0001g0048 a0001c0001t0001g0048	1	HG02717.hp1 HG02717.hp1	intron_variant	MODIFIER	c.340+2292T>C c.340+2292T>C	CPT2	ENSG00000157184.7	transcript	ENST00000371486.4	protein_coding	3/4		chr1	53204721
chr1:53204779	G G	A A	10	a0002c0002t0001g0019 a0002c0002t0001g0084 a0004c0004t0001g0016 others(7): Show a0002c0002t0001g0019 a0002c0002t0001g0084 a0004c0004t0001g0016 a0004c0004t0001g0081 a0004c0004t0001g0093 a0004c0004t0001g0099 a0004c0004t0001g0100 a0004c0004t0001g0101 a0004c0004t0001g0102 a0012c0016t0001g0019	14	HG00408.hp2 HG00544.hp2 HG00558.hp1 others(11): Show HG00408.hp2 HG00544.hp2 HG00558.hp1 HG02055.hp1 HG02818.hp1 HG03225.hp1 NA18906.hp2 NA18965.hp2 NA18970.hp2 NA18972.hp1 NA18973.hp1 NA18998.hp1 NA19004.hp1 NA19086.hp1	intron_variant	MODIFIER	c.340+2350G>A c.340+2350G>A	CPT2	ENSG00000157184.7	transcript	ENST00000371486.4	protein_coding	3/4		chr1	53204779
chr1:53205298	G G	T T	1	a0003c0003t0001g0089 a0003c0003t0001g0089	1	NA19070.hp2 NA19070.hp2	intron_variant	MODIFIER	c.340+2869G>T c.340+2869G>T	CPT2	ENSG00000157184.7	transcript	ENST00000371486.4	protein_coding	3/4		chr1	53205298
chr1:53205331	T T	C C	1	a0002c0002t0001g0076 a0002c0002t0001g0076	1	NA20300.hp1 NA20300.hp1	intron_variant	MODIFIER	c.340+2902T>C c.340+2902T>C	CPT2	ENSG00000157184.7	transcript	ENST00000371486.4	protein_coding	3/4		chr1	53205331
chr1:53205364	A A	C C	64	a0001c0001t0001g0026 a0001c0001t0001g0044 a0002c0002t0001g0001 others(61): Show a0001c0001t0001g0026 a0001c0001t0001g0044 a0002c0002t0001g0001 a0002c0002t0001g0014 a0002c0002t0001g0019 a0002c0002t0001g0022 a0002c0002t0001g0023 a0002c0002t0001g0024 a0002c0002t0001g0034 a0002c0002t0001g0035 a0002c0002t0001g0036 a0002c0002t0001g0076 a0002c0002t0001g0080 a0002c0002t0001g0084 a0002c0002t0001g0104 a0002c0002t0001g0105 a0002c0002t0001g0106 a0002c0002t0001g0107 a0002c0002t0001g0108 a0002c0002t0001g0109 a0002c0002t0001g0110 a0002c0002t0001g0111 a0002c0002t0001g0112 a0002c0002t0001g0113 a0002c0002t0001g0114 a0002c0007t0001g0001 a0002c0010t0001g0001 a0002c0017t0001g0001 a0003c0003t0001g0005 a0003c0003t0001g0012 a0003c0003t0001g0032 a0003c0003t0001g0033 a0003c0003t0001g0082 a0003c0003t0001g0083 a0003c0003t0001g0085 a0003c0003t0001g0086 a0003c0003t0001g0087 a0003c0003t0001g0088 a0003c0003t0001g0089 a0003c0003t0001g0090 a0004c0004t0001g0007 a0004c0004t0001g0016 a0004c0004t0001g0025 a0004c0004t0001g0037 a0004c0004t0001g0038 a0004c0004t0001g0039 a0004c0004t0001g0040 a0004c0004t0001g0041 a0004c0004t0001g0077 a0004c0004t0001g0079 a0004c0004t0001g0081 a0004c0004t0001g0093 a0004c0004t0001g0099 a0004c0004t0001g0100 a0004c0004t0001g0101 a0004c0004t0001g0102 a0005c0008t0001g0031 a0006c0009t0001g0001 a0006c0009t0001g0023 a0007c0014t0001g0078 a0008c0012t0001g0025 a0009c0013t0001g0001 a0010c0011t0001g0001 a0012c0016t0001g0019	170	HG00140.hp2 HG00323.hp1 HG00323.hp2 others(167): Show HG00140.hp2 HG00323.hp1 HG00323.hp2 HG00408.hp2 HG00438.hp1 HG00438.hp2 HG00544.hp1 HG00544.hp2 HG00558.hp1 HG00558.hp2 HG00597.hp2 HG00741.hp2 HG01070.hp2 HG01071.hp1 HG01081.hp1 HG01081.hp2 HG01099.hp2 HG01106.hp2 HG01123.hp2 HG01167.hp1 HG01168.hp2 HG01169.hp2 HG01175.hp1 HG01243.hp2 HG01255.hp1 HG01255.hp2 HG01258.hp2 HG01346.hp1 HG01346.hp2 HG01358.hp1 HG01358.hp2 HG01361.hp2 HG01515.hp2 HG01975.hp2 HG02015.hp1 HG02015.hp2 HG02027.hp2 HG02040.hp1 HG02055.hp1 HG02071.hp1 HG02074.hp2 HG02080.hp1 HG02083.hp1 HG02109.hp2 HG02132.hp1 HG02132.hp2 HG02148.hp2 HG02165.hp1 HG02165.hp2 HG02273.hp2 HG02300.hp2 HG02630.hp1 HG02683.hp2 HG02818.hp1 HG02818.hp2 HG03017.hp1 HG03098.hp1 HG03139.hp2 HG03195.hp1 HG03225.hp1 HG03831.hp1 HG03831.hp2 HG03927.hp1 HG04199.hp1 HG04228.hp2 NA18612.hp2 NA18906.hp2 NA18939.hp1 NA18944.hp1 NA18944.hp2 NA18945.hp2 NA18946.hp2 NA18948.hp1 NA18948.hp2 NA18949.hp1 NA18949.hp2 NA18950.hp1 NA18951.hp1 NA18951.hp2 NA18953.hp1 NA18954.hp2 NA18959.hp1 NA18960.hp1 NA18960.hp2 NA18961.hp1 NA18961.hp2 NA18963.hp2 NA18965.hp2 NA18969.hp1 NA18970.hp1 NA18970.hp2 NA18971.hp1 NA18971.hp2 NA18972.hp1 NA18972.hp2 NA18973.hp1 NA18973.hp2 NA18977.hp1 NA18977.hp2 NA18980.hp2 NA18981.hp1 NA18981.hp2 NA18982.hp1 NA18983.hp2 NA18986.hp1 NA18986.hp2 NA18988.hp2 NA18990.hp1 NA18991.hp1 NA18992.hp1 NA18992.hp2 NA18994.hp2 NA18997.hp1 NA18997.hp2 NA18998.hp1 NA18998.hp2 NA18999.hp2 NA19000.hp2 NA19001.hp2 NA19003.hp1 NA19003.hp2 NA19004.hp1 NA19005.hp1 NA19006.hp2 NA19007.hp1 NA19007.hp2 NA19009.hp1 NA19011.hp2 NA19054.hp1 NA19055.hp1 NA19055.hp2 NA19056.hp2 NA19058.hp1 NA19062.hp1 NA19062.hp2 NA19063.hp1 NA19063.hp2 NA19064.hp1 NA19065.hp1 NA19065.hp2 NA19066.hp2 NA19067.hp2 NA19068.hp2 NA19070.hp1 NA19070.hp2 NA19074.hp1 NA19074.hp2 NA19075.hp2 NA19076.hp1 NA19076.hp2 NA19079.hp1 NA19079.hp2 NA19080.hp1 NA19080.hp2 NA19081.hp2 NA19083.hp1 NA19084.hp2 NA19085.hp1 NA19086.hp1 NA19086.hp2 NA19088.hp1 NA19088.hp2 NA19089.hp1 NA19089.hp2 NA19091.hp2 NA20129.hp2 NA20300.hp1 NA20300.hp2 NA20752.hp2 homoSapiens_chm13v2.hp1	intron_variant	MODIFIER	c.340+2935A>C c.340+2935A>C	CPT2	ENSG00000157184.7	transcript	ENST00000371486.4	protein_coding	3/4		chr1	53205364
chr1:53205428	C C	G G	2	a0001c0001t0001g0009 a0001c0001t0001g0096 a0001c0001t0001g0009 a0001c0001t0001g0096	10	HG02083.hp2 NA18939.hp2 NA18942.hp1 others(7): Show HG02083.hp2 NA18939.hp2 NA18942.hp1 NA18980.hp1 NA18993.hp2 NA19001.hp1 NA19010.hp2 NA19011.hp1 NA19085.hp2 NA19091.hp1	intron_variant	MODIFIER	c.340+2999C>G c.340+2999C>G	CPT2	ENSG00000157184.7	transcript	ENST00000371486.4	protein_coding	3/4		chr1	53205428
chr1:53205794	C C	T T	1	a0001c0001t0001g0074 a0001c0001t0001g0074	1	HG02602.hp2 HG02602.hp2	intron_variant	MODIFIER	c.340+3365C>T c.340+3365C>T	CPT2	ENSG00000157184.7	transcript	ENST00000371486.4	protein_coding	3/4		chr1	53205794
chr1:53205878	G G	A A	2	a0001c0001t0001g0009 a0001c0001t0001g0096 a0001c0001t0001g0009 a0001c0001t0001g0096	10	HG02083.hp2 NA18939.hp2 NA18942.hp1 others(7): Show HG02083.hp2 NA18939.hp2 NA18942.hp1 NA18980.hp1 NA18993.hp2 NA19001.hp1 NA19010.hp2 NA19011.hp1 NA19085.hp2 NA19091.hp1	intron_variant	MODIFIER	c.340+3449G>A c.340+3449G>A	CPT2	ENSG00000157184.7	transcript	ENST00000371486.4	protein_coding	3/4		chr1	53205878
chr1:53206040	C C	T T	1	a0002c0002t0001g0036 a0002c0002t0001g0036	2	HG01346.hp2 HG01515.hp2 HG01346.hp2 HG01515.hp2	intron_variant	MODIFIER	c.340+3611C>T c.340+3611C>T	CPT2	ENSG00000157184.7	transcript	ENST00000371486.4	protein_coding	3/4		chr1	53206040
chr1:53206182	C C	CA CA	11	a0001c0001t0001g0021 a0001c0001t0001g0044 a0001c0001t0001g0051 others(8): Show a0001c0001t0001g0021 a0001c0001t0001g0044 a0001c0001t0001g0051 a0001c0001t0001g0068 a0001c0001t0001g0069 a0002c0002t0001g0107 a0003c0003t0001g0085 a0003c0003t0001g0086 a0003c0003t0001g0087 a0004c0004t0001g0037 a0004c0004t0001g0100	13	HG00544.hp1 HG01081.hp2 HG02040.hp2 others(10): Show HG00544.hp1 HG01081.hp2 HG02040.hp2 HG02055.hp2 HG02071.hp1 HG02083.hp1 HG02258.hp1 HG04228.hp1 NA18972.hp2 NA18973.hp1 NA19062.hp2 NA19067.hp1 NA19083.hp2	intron_variant	MODIFIER	c.340+3774dupA c.340+3774dupA	CPT2	ENSG00000157184.7	transcript	ENST00000371486.4	protein_coding	3/4	INFO_REALIGN_3_PRIME	chr1	53206182
chr1:53206182	CA CA	C C	17	a0001c0001t0001g0042 a0001c0001t0001g0063 a0001c0001t0001g0073 others(14): Show a0001c0001t0001g0042 a0001c0001t0001g0063 a0001c0001t0001g0073 a0001c0001t0001g0092 a0002c0002t0001g0019 a0002c0002t0001g0023 a0002c0002t0001g0080 a0002c0002t0001g0084 a0002c0002t0001g0106 a0002c0002t0001g0111 a0003c0003t0001g0033 a0003c0003t0001g0083 a0004c0004t0001g0040 a0004c0004t0001g0041 a0005c0008t0001g0031 a0006c0009t0001g0023 a0012c0016t0001g0019	21	HG01099.hp2 HG01123.hp2 HG01168.hp2 others(18): Show HG01099.hp2 HG01123.hp2 HG01168.hp2 HG01169.hp1 HG02055.hp1 HG02630.hp1 HG02809.hp2 HG02818.hp1 HG03098.hp1 HG03225.hp1 HG03486.hp1 NA18906.hp2 NA18963.hp2 NA18977.hp2 NA18982.hp2 NA19006.hp2 NA19055.hp2 NA19074.hp1 NA19076.hp2 NA19083.hp1 NA20129.hp2	intron_variant	MODIFIER	c.340+3774delA c.340+3774delA	CPT2	ENSG00000157184.7	transcript	ENST00000371486.4	protein_coding	3/4	INFO_REALIGN_3_PRIME	chr1	53206182
chr1:53206182	CAAAAAAA others(3): Show CAAAAAAAAAA	C C	1	a0001c0001t0001g0064 a0001c0001t0001g0064	1	HG02647.hp2 HG02647.hp2	intron_variant	MODIFIER	c.340+3765_340+3774d others(12): Show c.340+3765_340+3774delAAAAAAAAAA	CPT2	ENSG00000157184.7	transcript	ENST00000371486.4	protein_coding	3/4	INFO_REALIGN_3_PRIME	chr1	53206182
chr1:53206231	G G	A A	1	a0001c0001t0001g0070 a0001c0001t0001g0070	1	HG04115.hp1 HG04115.hp1	intron_variant	MODIFIER	c.341-3784G>A c.341-3784G>A	CPT2	ENSG00000157184.7	transcript	ENST00000371486.4	protein_coding	3/4		chr1	53206231
chr1:53206253	T T	G G	1	a0001c0001t0001g0052 a0001c0001t0001g0052	1	HG03654.hp1 HG03654.hp1	intron_variant	MODIFIER	c.341-3762T>G c.341-3762T>G	CPT2	ENSG00000157184.7	transcript	ENST00000371486.4	protein_coding	3/4		chr1	53206253
chr1:53206356	A A	G G	17	a0004c0004t0001g0007 a0004c0004t0001g0016 a0004c0004t0001g0025 others(14): Show a0004c0004t0001g0007 a0004c0004t0001g0016 a0004c0004t0001g0025 a0004c0004t0001g0037 a0004c0004t0001g0038 a0004c0004t0001g0039 a0004c0004t0001g0040 a0004c0004t0001g0041 a0004c0004t0001g0079 a0004c0004t0001g0081 a0004c0004t0001g0093 a0004c0004t0001g0099 a0004c0004t0001g0100 a0004c0004t0001g0101 a0004c0004t0001g0102 a0007c0014t0001g0078 a0008c0012t0001g0025	35	HG00408.hp2 HG00438.hp2 HG00544.hp2 others(32): Show HG00408.hp2 HG00438.hp2 HG00544.hp2 HG00558.hp1 HG01081.hp2 HG01106.hp2 HG01167.hp1 HG01168.hp2 HG01169.hp2 HG01346.hp1 HG01358.hp2 HG02015.hp2 HG02165.hp1 HG02300.hp2 HG02683.hp2 HG02818.hp2 HG03139.hp2 HG03831.hp1 HG04228.hp2 NA18963.hp2 NA18965.hp2 NA18970.hp2 NA18971.hp1 NA18972.hp1 NA18973.hp1 NA18998.hp1 NA19004.hp1 NA19005.hp1 NA19007.hp1 NA19074.hp2 NA19075.hp2 NA19081.hp2 NA19086.hp1 NA19089.hp2 NA20300.hp2	intron_variant	MODIFIER	c.341-3659A>G c.341-3659A>G	CPT2	ENSG00000157184.7	transcript	ENST00000371486.4	protein_coding	3/4		chr1	53206356
chr1:53206469	C C	T T	1	a0001c0001t0001g0062 a0001c0001t0001g0062	1	HG02602.hp1 HG02602.hp1	intron_variant	MODIFIER	c.341-3546C>T c.341-3546C>T	CPT2	ENSG00000157184.7	transcript	ENST00000371486.4	protein_coding	3/4		chr1	53206469
chr1:53206498	C C	T T	1	a0001c0006t0001g0072 a0001c0006t0001g0072	1	HG03130.hp2 HG03130.hp2	intron_variant	MODIFIER	c.341-3517C>T c.341-3517C>T	CPT2	ENSG00000157184.7	transcript	ENST00000371486.4	protein_coding	3/4		chr1	53206498
chr1:53206598	G G	A A	50	a0002c0002t0001g0001 a0002c0002t0001g0014 a0002c0002t0001g0019 others(47): Show a0002c0002t0001g0001 a0002c0002t0001g0014 a0002c0002t0001g0019 a0002c0002t0001g0022 a0002c0002t0001g0023 a0002c0002t0001g0024 a0002c0002t0001g0034 a0002c0002t0001g0035 a0002c0002t0001g0036 a0002c0002t0001g0076 a0002c0002t0001g0080 a0002c0002t0001g0084 a0002c0002t0001g0104 a0002c0002t0001g0105 a0002c0002t0001g0106 a0002c0002t0001g0107 a0002c0002t0001g0108 a0002c0002t0001g0109 a0002c0002t0001g0110 a0002c0002t0001g0111 a0002c0002t0001g0112 a0002c0002t0001g0113 a0002c0002t0001g0114 a0002c0007t0001g0001 a0002c0010t0001g0001 a0002c0017t0001g0001 a0004c0004t0001g0007 a0004c0004t0001g0016 a0004c0004t0001g0025 a0004c0004t0001g0037 a0004c0004t0001g0038 a0004c0004t0001g0039 a0004c0004t0001g0040 a0004c0004t0001g0041 a0004c0004t0001g0077 a0004c0004t0001g0079 a0004c0004t0001g0081 a0004c0004t0001g0093 a0004c0004t0001g0099 a0004c0004t0001g0100 a0004c0004t0001g0101 a0004c0004t0001g0102 a0005c0008t0001g0031 a0006c0009t0001g0001 a0006c0009t0001g0023 a0007c0014t0001g0078 a0008c0012t0001g0025 a0009c0013t0001g0001 a0010c0011t0001g0001 a0012c0016t0001g0019	128	HG00140.hp2 HG00323.hp1 HG00323.hp2 others(125): Show HG00140.hp2 HG00323.hp1 HG00323.hp2 HG00408.hp2 HG00438.hp1 HG00438.hp2 HG00544.hp2 HG00558.hp1 HG00558.hp2 HG00597.hp2 HG01070.hp2 HG01071.hp1 HG01081.hp1 HG01081.hp2 HG01099.hp2 HG01106.hp2 HG01123.hp2 HG01167.hp1 HG01168.hp2 HG01169.hp2 HG01175.hp1 HG01243.hp2 HG01255.hp2 HG01258.hp2 HG01346.hp1 HG01346.hp2 HG01358.hp1 HG01358.hp2 HG01361.hp2 HG01515.hp2 HG02015.hp1 HG02015.hp2 HG02040.hp1 HG02055.hp1 HG02080.hp1 HG02083.hp1 HG02109.hp2 HG02132.hp1 HG02148.hp2 HG02165.hp1 HG02165.hp2 HG02273.hp2 HG02300.hp2 HG02630.hp1 HG02683.hp2 HG02818.hp1 HG02818.hp2 HG03017.hp1 HG03098.hp1 HG03139.hp2 HG03195.hp1 HG03225.hp1 HG03831.hp1 HG03831.hp2 HG03927.hp1 HG04199.hp1 HG04228.hp2 NA18906.hp2 NA18939.hp1 NA18944.hp1 NA18944.hp2 NA18948.hp1 NA18948.hp2 NA18949.hp1 NA18951.hp2 NA18954.hp2 NA18959.hp1 NA18960.hp1 NA18961.hp1 NA18961.hp2 NA18963.hp2 NA18965.hp2 NA18969.hp1 NA18970.hp1 NA18970.hp2 NA18971.hp1 NA18972.hp1 NA18973.hp1 NA18973.hp2 NA18977.hp1 NA18980.hp2 NA18981.hp2 NA18983.hp2 NA18986.hp2 NA18990.hp1 NA18991.hp1 NA18992.hp1 NA18994.hp2 NA18997.hp1 NA18998.hp1 NA18998.hp2 NA18999.hp2 NA19000.hp2 NA19001.hp2 NA19003.hp1 NA19004.hp1 NA19005.hp1 NA19006.hp2 NA19007.hp1 NA19007.hp2 NA19009.hp1 NA19011.hp2 NA19055.hp1 NA19056.hp2 NA19062.hp1 NA19065.hp1 NA19067.hp2 NA19070.hp1 NA19074.hp2 NA19075.hp2 NA19076.hp2 NA19079.hp1 NA19079.hp2 NA19080.hp1 NA19081.hp2 NA19083.hp1 NA19085.hp1 NA19086.hp1 NA19086.hp2 NA19088.hp1 NA19088.hp2 NA19089.hp1 NA19089.hp2 NA20129.hp2 NA20300.hp1 NA20300.hp2 NA20752.hp2 homoSapiens_chm13v2.hp1	intron_variant	MODIFIER	c.341-3417G>A c.341-3417G>A	CPT2	ENSG00000157184.7	transcript	ENST00000371486.4	protein_coding	3/4		chr1	53206598
chr1:53206708	C C	T T	18	a0001c0001t0001g0004 a0001c0001t0001g0011 a0001c0001t0001g0013 others(15): Show a0001c0001t0001g0004 a0001c0001t0001g0011 a0001c0001t0001g0013 a0001c0001t0001g0018 a0001c0001t0001g0029 a0001c0001t0001g0030 a0001c0001t0001g0043 a0001c0001t0001g0045 a0001c0001t0001g0068 a0001c0001t0001g0069 a0001c0001t0001g0070 a0001c0001t0001g0071 a0001c0001t0001g0073 a0001c0001t0001g0074 a0001c0001t0001g0098 a0001c0006t0001g0004 a0001c0006t0001g0072 a0011c0015t0001g0004	52	HG00639.hp2 HG00735.hp1 HG00741.hp1 others(49): Show HG00639.hp2 HG00735.hp1 HG00741.hp1 HG01074.hp2 HG01168.hp1 HG01169.hp1 HG01192.hp1 HG01433.hp2 HG01884.hp1 HG01943.hp2 HG01993.hp2 HG02027.hp1 HG02055.hp2 HG02071.hp2 HG02145.hp2 HG02257.hp1 HG02257.hp2 HG02258.hp1 HG02280.hp1 HG02280.hp2 HG02559.hp2 HG02602.hp2 HG02615.hp1 HG02647.hp1 HG02723.hp1 HG02735.hp1 HG02735.hp2 HG02895.hp1 HG02895.hp2 HG02896.hp2 HG02897.hp2 HG03041.hp1 HG03130.hp2 HG03209.hp2 HG03492.hp1 HG03516.hp2 HG03540.hp1 HG03540.hp2 HG03579.hp1 HG03688.hp2 HG04115.hp1 HG04115.hp2 HG04199.hp2 HG04204.hp2 HG06807.hp1 HG06807.hp2 NA18522.hp1 NA18612.hp1 NA19004.hp2 NA19010.hp1 NA19043.hp2 NA19084.hp1	intron_variant	MODIFIER	c.341-3307C>T c.341-3307C>T	CPT2	ENSG00000157184.7	transcript	ENST00000371486.4	protein_coding	3/4		chr1	53206708
chr1:53206951	A A	C C	2	a0001c0001t0001g0009 a0001c0001t0001g0096 a0001c0001t0001g0009 a0001c0001t0001g0096	10	HG02083.hp2 NA18939.hp2 NA18942.hp1 others(7): Show HG02083.hp2 NA18939.hp2 NA18942.hp1 NA18980.hp1 NA18993.hp2 NA19001.hp1 NA19010.hp2 NA19011.hp1 NA19085.hp2 NA19091.hp1	intron_variant	MODIFIER	c.341-3064A>C c.341-3064A>C	CPT2	ENSG00000157184.7	transcript	ENST00000371486.4	protein_coding	3/4		chr1	53206951
chr1:53206983	G G	A A	1	a0001c0001t0001g0042 a0001c0001t0001g0042	1	HG03486.hp1 HG03486.hp1	intron_variant	MODIFIER	c.341-3032G>A c.341-3032G>A	CPT2	ENSG00000157184.7	transcript	ENST00000371486.4	protein_coding	3/4		chr1	53206983
chr1:53207016	T T	C C	29	a0001c0001t0001g0026 a0001c0001t0001g0044 a0002c0002t0001g0001 others(26): Show a0001c0001t0001g0026 a0001c0001t0001g0044 a0002c0002t0001g0001 a0002c0002t0001g0014 a0002c0002t0001g0022 a0002c0002t0001g0023 a0002c0002t0001g0024 a0002c0002t0001g0034 a0002c0002t0001g0035 a0002c0002t0001g0036 a0002c0002t0001g0104 a0002c0002t0001g0105 a0002c0002t0001g0106 a0002c0002t0001g0107 a0002c0002t0001g0108 a0002c0002t0001g0109 a0002c0002t0001g0110 a0002c0002t0001g0111 a0002c0002t0001g0112 a0002c0002t0001g0113 a0002c0002t0001g0114 a0002c0007t0001g0001 a0002c0010t0001g0001 a0002c0017t0001g0001 a0004c0004t0001g0077 a0006c0009t0001g0001 a0006c0009t0001g0023 a0009c0013t0001g0001 a0010c0011t0001g0001	88	HG00140.hp2 HG00323.hp1 HG00323.hp2 others(85): Show HG00140.hp2 HG00323.hp1 HG00323.hp2 HG00438.hp1 HG00544.hp1 HG00558.hp2 HG00597.hp2 HG01070.hp2 HG01071.hp1 HG01081.hp1 HG01099.hp2 HG01123.hp2 HG01175.hp1 HG01243.hp2 HG01255.hp2 HG01258.hp2 HG01346.hp2 HG01358.hp1 HG01361.hp2 HG01515.hp2 HG02015.hp1 HG02040.hp1 HG02080.hp1 HG02083.hp1 HG02109.hp2 HG02132.hp1 HG02148.hp2 HG02165.hp2 HG02273.hp2 HG03017.hp1 HG03195.hp1 HG03831.hp2 HG03927.hp1 HG04199.hp1 NA18939.hp1 NA18944.hp1 NA18944.hp2 NA18948.hp1 NA18948.hp2 NA18949.hp1 NA18949.hp2 NA18951.hp2 NA18954.hp2 NA18959.hp1 NA18960.hp1 NA18961.hp1 NA18961.hp2 NA18969.hp1 NA18970.hp1 NA18973.hp2 NA18977.hp1 NA18980.hp2 NA18981.hp2 NA18982.hp1 NA18983.hp2 NA18986.hp2 NA18990.hp1 NA18991.hp1 NA18992.hp1 NA18994.hp2 NA18997.hp1 NA18998.hp2 NA18999.hp2 NA19000.hp2 NA19001.hp2 NA19003.hp1 NA19006.hp2 NA19007.hp2 NA19009.hp1 NA19011.hp2 NA19055.hp1 NA19056.hp2 NA19062.hp1 NA19065.hp1 NA19067.hp2 NA19070.hp1 NA19076.hp2 NA19079.hp1 NA19079.hp2 NA19080.hp1 NA19083.hp1 NA19085.hp1 NA19086.hp2 NA19088.hp1 NA19088.hp2 NA19089.hp1 NA20752.hp2 homoSapiens_chm13v2.hp1	intron_variant	MODIFIER	c.341-2999T>C c.341-2999T>C	CPT2	ENSG00000157184.7	transcript	ENST00000371486.4	protein_coding	3/4		chr1	53207016
chr1:53207165	A A	G G	2	a0001c0001t0001g0009 a0001c0001t0001g0096 a0001c0001t0001g0009 a0001c0001t0001g0096	10	HG02083.hp2 NA18939.hp2 NA18942.hp1 others(7): Show HG02083.hp2 NA18939.hp2 NA18942.hp1 NA18980.hp1 NA18993.hp2 NA19001.hp1 NA19010.hp2 NA19011.hp1 NA19085.hp2 NA19091.hp1	intron_variant	MODIFIER	c.341-2850A>G c.341-2850A>G	CPT2	ENSG00000157184.7	transcript	ENST00000371486.4	protein_coding	3/4		chr1	53207165
chr1:53207494	T T	C C	1	a0001c0001t0001g0042 a0001c0001t0001g0042	1	HG03486.hp1 HG03486.hp1	intron_variant	MODIFIER	c.341-2521T>C c.341-2521T>C	CPT2	ENSG00000157184.7	transcript	ENST00000371486.4	protein_coding	3/4		chr1	53207494
chr1:53207532	G G	A A	1	a0001c0001t0001g0011 a0001c0001t0001g0011	6	HG02257.hp2 HG02280.hp2 HG02895.hp2 others(3): Show HG02257.hp2 HG02280.hp2 HG02895.hp2 HG02897.hp2 HG03579.hp1 NA19043.hp2	intron_variant	MODIFIER	c.341-2483G>A c.341-2483G>A	CPT2	ENSG00000157184.7	transcript	ENST00000371486.4	protein_coding	3/4		chr1	53207532
chr1:53207712	C C	T T	2	a0003c0003t0001g0061 a0005c0008t0001g0031 a0003c0003t0001g0061 a0005c0008t0001g0031	3	HG02630.hp1 NA19030.hp2 NA20129.hp2 HG02630.hp1 NA19030.hp2 NA20129.hp2	intron_variant	MODIFIER	c.341-2303C>T c.341-2303C>T	CPT2	ENSG00000157184.7	transcript	ENST00000371486.4	protein_coding	3/4		chr1	53207712
chr1:53208397	T T	G G	1	a0002c0002t0001g0076 a0002c0002t0001g0076	1	NA20300.hp1 NA20300.hp1	intron_variant	MODIFIER	c.341-1618T>G c.341-1618T>G	CPT2	ENSG00000157184.7	transcript	ENST00000371486.4	protein_coding	3/4		chr1	53208397
chr1:53208497	T T	C C	1	a0002c0002t0001g0111 a0002c0002t0001g0111	1	HG01123.hp2 HG01123.hp2	intron_variant	MODIFIER	c.341-1518T>C c.341-1518T>C	CPT2	ENSG00000157184.7	transcript	ENST00000371486.4	protein_coding	3/4		chr1	53208497
chr1:53208813	A A	C C	3	a0001c0001t0001g0028 a0001c0001t0001g0060 a0001c0001t0001g0064 a0001c0001t0001g0028 a0001c0001t0001g0060 a0001c0001t0001g0064	4	HG02647.hp2 HG03041.hp2 HG03209.hp1 others(1): Show HG02647.hp2 HG03041.hp2 HG03209.hp1 NA19030.hp1	intron_variant	MODIFIER	c.341-1202A>C c.341-1202A>C	CPT2	ENSG00000157184.7	transcript	ENST00000371486.4	protein_coding	3/4		chr1	53208813
chr1:53208870	G G	A A	17	a0004c0004t0001g0007 a0004c0004t0001g0016 a0004c0004t0001g0025 others(14): Show a0004c0004t0001g0007 a0004c0004t0001g0016 a0004c0004t0001g0025 a0004c0004t0001g0037 a0004c0004t0001g0038 a0004c0004t0001g0039 a0004c0004t0001g0040 a0004c0004t0001g0041 a0004c0004t0001g0079 a0004c0004t0001g0081 a0004c0004t0001g0093 a0004c0004t0001g0099 a0004c0004t0001g0100 a0004c0004t0001g0101 a0004c0004t0001g0102 a0007c0014t0001g0078 a0008c0012t0001g0025	35	HG00408.hp2 HG00438.hp2 HG00544.hp2 others(32): Show HG00408.hp2 HG00438.hp2 HG00544.hp2 HG00558.hp1 HG01081.hp2 HG01106.hp2 HG01167.hp1 HG01168.hp2 HG01169.hp2 HG01346.hp1 HG01358.hp2 HG02015.hp2 HG02165.hp1 HG02300.hp2 HG02683.hp2 HG02818.hp2 HG03139.hp2 HG03831.hp1 HG04228.hp2 NA18963.hp2 NA18965.hp2 NA18970.hp2 NA18971.hp1 NA18972.hp1 NA18973.hp1 NA18998.hp1 NA19004.hp1 NA19005.hp1 NA19007.hp1 NA19074.hp2 NA19075.hp2 NA19081.hp2 NA19086.hp1 NA19089.hp2 NA20300.hp2	intron_variant	MODIFIER	c.341-1145G>A c.341-1145G>A	CPT2	ENSG00000157184.7	transcript	ENST00000371486.4	protein_coding	3/4		chr1	53208870
chr1:53209024	G G	A A	1	a0002c0002t0001g0108 a0002c0002t0001g0108	1	HG00323.hp2 HG00323.hp2	intron_variant	MODIFIER	c.341-991G>A c.341-991G>A	CPT2	ENSG00000157184.7	transcript	ENST00000371486.4	protein_coding	3/4		chr1	53209024
chr1:53209187	C C	G G	3	a0001c0001t0001g0028 a0001c0001t0001g0060 a0001c0001t0001g0064 a0001c0001t0001g0028 a0001c0001t0001g0060 a0001c0001t0001g0064	4	HG02647.hp2 HG03041.hp2 HG03209.hp1 others(1): Show HG02647.hp2 HG03041.hp2 HG03209.hp1 NA19030.hp1	intron_variant	MODIFIER	c.341-828C>G c.341-828C>G	CPT2	ENSG00000157184.7	transcript	ENST00000371486.4	protein_coding	3/4		chr1	53209187
chr1:53209335	G G	C C	1	a0001c0001t0001g0053 a0001c0001t0001g0053	1	HG03927.hp2 HG03927.hp2	intron_variant	MODIFIER	c.341-680G>C c.341-680G>C	CPT2	ENSG00000157184.7	transcript	ENST00000371486.4	protein_coding	3/4		chr1	53209335
chr1:53209377	G G	A A	116	a0001c0001t0001g0003 a0001c0001t0001g0004 a0001c0001t0001g0006 others(113): Show a0001c0001t0001g0003 a0001c0001t0001g0004 a0001c0001t0001g0006 a0001c0001t0001g0008 a0001c0001t0001g0009 a0001c0001t0001g0010 a0001c0001t0001g0011 a0001c0001t0001g0013 a0001c0001t0001g0015 a0001c0001t0001g0017 a0001c0001t0001g0018 a0001c0001t0001g0020 a0001c0001t0001g0021 a0001c0001t0001g0026 a0001c0001t0001g0027 a0001c0001t0001g0028 a0001c0001t0001g0029 a0001c0001t0001g0030 a0001c0001t0001g0042 a0001c0001t0001g0043 a0001c0001t0001g0044 a0001c0001t0001g0045 a0001c0001t0001g0047 a0001c0001t0001g0048 a0001c0001t0001g0049 a0001c0001t0001g0050 a0001c0001t0001g0054 a0001c0001t0001g0055 a0001c0001t0001g0056 a0001c0001t0001g0057 a0001c0001t0001g0058 a0001c0001t0001g0060 a0001c0001t0001g0063 a0001c0001t0001g0064 a0001c0001t0001g0067 a0001c0001t0001g0068 a0001c0001t0001g0069 a0001c0001t0001g0070 a0001c0001t0001g0071 a0001c0001t0001g0073 a0001c0001t0001g0074 a0001c0001t0001g0075 a0001c0001t0001g0091 a0001c0001t0001g0092 a0001c0001t0001g0096 a0001c0001t0001g0098 a0001c0001t0001g0103 a0001c0005t0001g0006 a0001c0005t0001g0094 a0001c0005t0001g0097 a0001c0006t0001g0004 a0001c0006t0001g0072 a0002c0002t0001g0001 a0002c0002t0001g0014 a0002c0002t0001g0019 a0002c0002t0001g0022 a0002c0002t0001g0023 a0002c0002t0001g0024 a0002c0002t0001g0034 a0002c0002t0001g0035 a0002c0002t0001g0036 a0002c0002t0001g0076 a0002c0002t0001g0080 a0002c0002t0001g0084 a0002c0002t0001g0104 a0002c0002t0001g0105 a0002c0002t0001g0106 a0002c0002t0001g0107 a0002c0002t0001g0108 a0002c0002t0001g0109 a0002c0002t0001g0110 a0002c0002t0001g0111 a0002c0002t0001g0112 a0002c0002t0001g0113 a0002c0002t0001g0114 a0002c0007t0001g0001 a0002c0010t0001g0001 a0002c0017t0001g0001 a0003c0003t0001g0005 a0003c0003t0001g0012 a0003c0003t0001g0032 a0003c0003t0001g0033 a0003c0003t0001g0061 a0003c0003t0001g0082 a0003c0003t0001g0083 a0003c0003t0001g0085 a0003c0003t0001g0086 a0003c0003t0001g0087 a0003c0003t0001g0088 a0003c0003t0001g0089 a0003c0003t0001g0090 a0004c0004t0001g0007 a0004c0004t0001g0016 a0004c0004t0001g0025 a0004c0004t0001g0037 a0004c0004t0001g0038 a0004c0004t0001g0039 a0004c0004t0001g0040 a0004c0004t0001g0041 a0004c0004t0001g0077 a0004c0004t0001g0079 a0004c0004t0001g0081 a0004c0004t0001g0093 a0004c0004t0001g0099 a0004c0004t0001g0100 a0004c0004t0001g0101 a0004c0004t0001g0102 a0005c0008t0001g0031 a0006c0009t0001g0001 a0006c0009t0001g0023 a0007c0014t0001g0078 a0008c0012t0001g0025 a0009c0013t0001g0001 a0010c0011t0001g0001 a0011c0015t0001g0004 a0012c0016t0001g0019	337	HG00140.hp2 HG00323.hp1 HG00323.hp2 others(334): Show HG00140.hp2 HG00323.hp1 HG00323.hp2 HG00408.hp2 HG00438.hp1 HG00438.hp2 HG00544.hp1 HG00544.hp2 HG00558.hp1 HG00558.hp2 HG00597.hp2 HG00639.hp2 HG00642.hp1 HG00642.hp2 HG00735.hp1 HG00735.hp2 HG00741.hp1 HG00741.hp2 HG01070.hp2 HG01071.hp1 HG01074.hp2 HG01081.hp1 HG01081.hp2 HG01099.hp1 HG01099.hp2 HG01106.hp2 HG01123.hp1 HG01123.hp2 HG01167.hp1 HG01167.hp2 HG01168.hp1 HG01168.hp2 HG01169.hp1 HG01169.hp2 HG01175.hp1 HG01175.hp2 HG01192.hp1 HG01192.hp2 HG01243.hp1 HG01243.hp2 HG01255.hp1 HG01255.hp2 HG01258.hp2 HG01346.hp1 HG01346.hp2 HG01358.hp1 HG01358.hp2 HG01361.hp2 HG01433.hp2 HG01515.hp2 HG01884.hp1 HG01884.hp2 HG01891.hp1 HG01891.hp2 HG01943.hp2 HG01952.hp2 HG01975.hp2 HG01981.hp1 HG01981.hp2 HG01993.hp1 HG01993.hp2 HG02004.hp1 HG02015.hp1 HG02015.hp2 HG02027.hp1 HG02027.hp2 HG02040.hp1 HG02040.hp2 HG02055.hp1 HG02055.hp2 HG02071.hp1 HG02071.hp2 HG02074.hp1 HG02074.hp2 HG02080.hp1 HG02080.hp2 HG02083.hp1 HG02083.hp2 HG02109.hp1 HG02109.hp2 HG02132.hp1 HG02132.hp2 HG02145.hp1 HG02145.hp2 HG02148.hp1 HG02148.hp2 HG02165.hp1 HG02165.hp2 HG02257.hp1 HG02257.hp2 HG02258.hp1 HG02258.hp2 HG02273.hp1 HG02273.hp2 HG02280.hp1 HG02280.hp2 HG02293.hp1 HG02293.hp2 HG02300.hp1 HG02300.hp2 HG02451.hp1 HG02451.hp2 HG02486.hp1 HG02486.hp2 HG02559.hp1 HG02559.hp2 HG02572.hp1 HG02572.hp2 HG02602.hp2 HG02615.hp1 HG02615.hp2 HG02622.hp1 HG02622.hp2 HG02630.hp1 HG02630.hp2 HG02647.hp1 HG02647.hp2 HG02683.hp1 HG02683.hp2 HG02698.hp1 HG02717.hp1 HG02717.hp2 HG02723.hp1 HG02723.hp2 HG02735.hp1 HG02735.hp2 HG02738.hp1 HG02809.hp1 HG02809.hp2 HG02818.hp1 HG02818.hp2 HG02895.hp1 HG02895.hp2 HG02896.hp1 HG02896.hp2 HG02897.hp1 HG02897.hp2 HG02922.hp1 HG02922.hp2 HG02965.hp1 HG02965.hp2 HG03017.hp1 HG03041.hp1 HG03041.hp2 HG03098.hp1 HG03098.hp2 HG03130.hp1 HG03130.hp2 HG03139.hp1 HG03139.hp2 HG03195.hp1 HG03195.hp2 HG03209.hp1 HG03209.hp2 HG03225.hp1 HG03225.hp2 HG03453.hp1 HG03453.hp2 HG03471.hp1 HG03471.hp2 HG03486.hp1 HG03486.hp2 HG03492.hp1 HG03492.hp2 HG03516.hp1 HG03516.hp2 HG03540.hp1 HG03540.hp2 HG03579.hp1 HG03579.hp2 HG03669.hp1 HG03688.hp2 HG03831.hp1 HG03831.hp2 HG03927.hp1 HG04115.hp1 HG04115.hp2 HG04199.hp1 HG04199.hp2 HG04204.hp2 HG04228.hp1 HG04228.hp2 HG06807.hp1 HG06807.hp2 NA18522.hp1 NA18522.hp2 NA18612.hp1 NA18612.hp2 NA18906.hp1 NA18906.hp2 NA18939.hp1 NA18939.hp2 NA18941.hp2 NA18942.hp1 NA18944.hp1 NA18944.hp2 NA18945.hp2 NA18946.hp2 NA18948.hp1 NA18948.hp2 NA18949.hp1 NA18949.hp2 NA18950.hp1 NA18951.hp1 NA18951.hp2 NA18953.hp1 NA18954.hp1 NA18954.hp2 NA18959.hp1 NA18959.hp2 NA18960.hp1 NA18960.hp2 NA18961.hp1 NA18961.hp2 NA18963.hp1 NA18963.hp2 NA18965.hp1 NA18965.hp2 NA18969.hp1 NA18969.hp2 NA18970.hp1 NA18970.hp2 NA18971.hp1 NA18971.hp2 NA18972.hp1 NA18972.hp2 NA18973.hp1 NA18973.hp2 NA18977.hp1 NA18977.hp2 NA18980.hp1 NA18980.hp2 NA18981.hp1 NA18981.hp2 NA18982.hp1 NA18982.hp2 NA18983.hp1 NA18983.hp2 NA18986.hp1 NA18986.hp2 NA18988.hp1 NA18988.hp2 NA18990.hp1 NA18990.hp2 NA18991.hp1 NA18991.hp2 NA18992.hp1 NA18992.hp2 NA18993.hp1 NA18993.hp2 NA18994.hp2 NA18997.hp1 NA18997.hp2 NA18998.hp1 NA18998.hp2 NA18999.hp1 NA18999.hp2 NA19000.hp1 NA19000.hp2 NA19001.hp1 NA19001.hp2 NA19003.hp1 NA19003.hp2 NA19004.hp1 NA19004.hp2 NA19005.hp1 NA19005.hp2 NA19006.hp2 NA19007.hp1 NA19007.hp2 NA19009.hp1 NA19009.hp2 NA19010.hp1 NA19010.hp2 NA19011.hp1 NA19011.hp2 NA19030.hp1 NA19030.hp2 NA19043.hp1 NA19043.hp2 NA19054.hp1 NA19055.hp1 NA19055.hp2 NA19056.hp1 NA19056.hp2 NA19058.hp1 NA19058.hp2 NA19062.hp1 NA19062.hp2 NA19063.hp1 NA19063.hp2 NA19064.hp1 NA19064.hp2 NA19065.hp1 NA19065.hp2 NA19066.hp1 NA19066.hp2 NA19067.hp2 NA19068.hp1 NA19068.hp2 NA19070.hp1 NA19070.hp2 NA19074.hp1 NA19074.hp2 NA19075.hp1 NA19075.hp2 NA19076.hp1 NA19076.hp2 NA19079.hp1 NA19079.hp2 NA19080.hp1 NA19080.hp2 NA19081.hp1 NA19081.hp2 NA19083.hp1 NA19083.hp2 NA19084.hp1 NA19084.hp2 NA19085.hp1 NA19085.hp2 NA19086.hp1 NA19086.hp2 NA19088.hp1 NA19088.hp2 NA19089.hp1 NA19089.hp2 NA19091.hp1 NA19091.hp2 NA19240.hp1 NA19240.hp2 NA20129.hp1 NA20129.hp2 NA20300.hp1 NA20300.hp2 NA20752.hp2 NA21309.hp2 homoSapiens_chm13v2.hp1	intron_variant	MODIFIER	c.341-638G>A c.341-638G>A	CPT2	ENSG00000157184.7	transcript	ENST00000371486.4	protein_coding	3/4		chr1	53209377
chr1:53209383	C C	T T	2	a0002c0002t0001g0036 a0002c0002t0001g0110 a0002c0002t0001g0036 a0002c0002t0001g0110	3	HG00323.hp1 HG01346.hp2 HG01515.hp2 HG00323.hp1 HG01346.hp2 HG01515.hp2	intron_variant	MODIFIER	c.341-632C>T c.341-632C>T	CPT2	ENSG00000157184.7	transcript	ENST00000371486.4	protein_coding	3/4		chr1	53209383
chr1:53209547	G G	A A	1	a0001c0001t0001g0068 a0001c0001t0001g0068	1	HG02055.hp2 HG02055.hp2	intron_variant	MODIFIER	c.341-468G>A c.341-468G>A	CPT2	ENSG00000157184.7	transcript	ENST00000371486.4	protein_coding	3/4		chr1	53209547
chr1:53209651	C C	T T	1	a0001c0001t0001g0075 a0001c0001t0001g0075	1	HG03471.hp2 HG03471.hp2	intron_variant	MODIFIER	c.341-364C>T c.341-364C>T	CPT2	ENSG00000157184.7	transcript	ENST00000371486.4	protein_coding	3/4		chr1	53209651
chr1:53209701	G G	A A	1	a0003c0003t0001g0085 a0003c0003t0001g0085	1	HG02071.hp1 HG02071.hp1	intron_variant	MODIFIER	c.341-314G>A c.341-314G>A	CPT2	ENSG00000157184.7	transcript	ENST00000371486.4	protein_coding	3/4		chr1	53209701
chr1:53209708	G G	A A	1	a0001c0001t0001g0060 a0001c0001t0001g0060	1	HG03041.hp2 HG03041.hp2	intron_variant	MODIFIER	c.341-307G>A c.341-307G>A	CPT2	ENSG00000157184.7	transcript	ENST00000371486.4	protein_coding	3/4		chr1	53209708
chr1:53209802	G G	T T	1	a0004c0004t0001g0079 a0004c0004t0001g0079	1	HG02818.hp2 HG02818.hp2	intron_variant	MODIFIER	c.341-213G>T c.341-213G>T	CPT2	ENSG00000157184.7	transcript	ENST00000371486.4	protein_coding	3/4		chr1	53209802
chr1:53209860	T T	C C	30	a0001c0001t0001g0026 a0001c0001t0001g0044 a0002c0002t0001g0001 others(27): Show a0001c0001t0001g0026 a0001c0001t0001g0044 a0002c0002t0001g0001 a0002c0002t0001g0014 a0002c0002t0001g0022 a0002c0002t0001g0023 a0002c0002t0001g0024 a0002c0002t0001g0034 a0002c0002t0001g0035 a0002c0002t0001g0036 a0002c0002t0001g0104 a0002c0002t0001g0105 a0002c0002t0001g0106 a0002c0002t0001g0107 a0002c0002t0001g0108 a0002c0002t0001g0109 a0002c0002t0001g0110 a0002c0002t0001g0111 a0002c0002t0001g0112 a0002c0002t0001g0113 a0002c0002t0001g0114 a0002c0007t0001g0001 a0002c0010t0001g0001 a0002c0017t0001g0001 a0003c0003t0001g0088 a0004c0004t0001g0077 a0006c0009t0001g0001 a0006c0009t0001g0023 a0009c0013t0001g0001 a0010c0011t0001g0001	89	HG00140.hp2 HG00323.hp1 HG00323.hp2 others(86): Show HG00140.hp2 HG00323.hp1 HG00323.hp2 HG00438.hp1 HG00544.hp1 HG00558.hp2 HG00597.hp2 HG01070.hp2 HG01071.hp1 HG01081.hp1 HG01099.hp2 HG01123.hp2 HG01175.hp1 HG01243.hp2 HG01255.hp2 HG01258.hp2 HG01346.hp2 HG01358.hp1 HG01361.hp2 HG01515.hp2 HG02015.hp1 HG02040.hp1 HG02080.hp1 HG02083.hp1 HG02109.hp2 HG02132.hp1 HG02148.hp2 HG02165.hp2 HG02273.hp2 HG03017.hp1 HG03195.hp1 HG03831.hp2 HG03927.hp1 HG04199.hp1 NA18939.hp1 NA18944.hp1 NA18944.hp2 NA18948.hp1 NA18948.hp2 NA18949.hp1 NA18949.hp2 NA18951.hp2 NA18954.hp2 NA18959.hp1 NA18960.hp1 NA18961.hp1 NA18961.hp2 NA18969.hp1 NA18970.hp1 NA18973.hp2 NA18977.hp1 NA18980.hp2 NA18981.hp2 NA18982.hp1 NA18983.hp2 NA18986.hp2 NA18990.hp1 NA18991.hp1 NA18992.hp1 NA18994.hp2 NA18997.hp1 NA18998.hp2 NA18999.hp2 NA19000.hp2 NA19001.hp2 NA19003.hp1 NA19006.hp2 NA19007.hp2 NA19009.hp1 NA19011.hp2 NA19055.hp1 NA19056.hp2 NA19062.hp1 NA19063.hp1 NA19065.hp1 NA19067.hp2 NA19070.hp1 NA19076.hp2 NA19079.hp1 NA19079.hp2 NA19080.hp1 NA19083.hp1 NA19085.hp1 NA19086.hp2 NA19088.hp1 NA19088.hp2 NA19089.hp1 NA20752.hp2 homoSapiens_chm13v2.hp1	intron_variant	MODIFIER	c.341-155T>C c.341-155T>C	CPT2	ENSG00000157184.7	transcript	ENST00000371486.4	protein_coding	3/4		chr1	53209860
chr1:53209999	T T	C C	1	a0004c0004t0001g0038 a0004c0004t0001g0038	1	NA20300.hp2 NA20300.hp2	intron_variant	MODIFIER	c.341-16T>C c.341-16T>C	CPT2	ENSG00000157184.7	transcript	ENST00000371486.4	protein_coding	3/4		chr1	53209999
chr1:53211414	G G	A A	1	a0001c0001t0001g0042 a0001c0001t0001g0042	1	HG03486.hp1 HG03486.hp1	intron_variant	MODIFIER	c.1645+95G>A c.1645+95G>A	CPT2	ENSG00000157184.7	transcript	ENST00000371486.4	protein_coding	4/4		chr1	53211414
chr1:53211417	C C	G G	1	a0001c0001t0001g0058 a0001c0001t0001g0058	1	HG01981.hp2 HG01981.hp2	intron_variant	MODIFIER	c.1645+98C>G c.1645+98C>G	CPT2	ENSG00000157184.7	transcript	ENST00000371486.4	protein_coding	4/4		chr1	53211417
chr1:53211447	A A	C C	3	a0001c0001t0001g0021 a0001c0001t0001g0026 a0001c0001t0001g0044 a0001c0001t0001g0021 a0001c0001t0001g0026 a0001c0001t0001g0044	6	HG00544.hp1 HG02040.hp2 HG04228.hp1 others(3): Show HG00544.hp1 HG02040.hp2 HG04228.hp1 NA18949.hp2 NA18982.hp1 NA19083.hp2	intron_variant	MODIFIER	c.1645+128A>C c.1645+128A>C	CPT2	ENSG00000157184.7	transcript	ENST00000371486.4	protein_coding	4/4		chr1	53211447
chr1:53211600	C C	CT CT	8	a0001c0001t0001g0009 a0001c0001t0001g0027 a0001c0001t0001g0030 others(5): Show a0001c0001t0001g0009 a0001c0001t0001g0027 a0001c0001t0001g0030 a0001c0001t0001g0059 a0001c0001t0001g0062 a0001c0001t0001g0071 a0001c0001t0001g0096 a0002c0002t0001g0076	18	HG00738.hp1 HG01433.hp2 HG02083.hp2 others(15): Show HG00738.hp1 HG01433.hp2 HG02083.hp2 HG02602.hp1 NA18612.hp1 NA18939.hp2 NA18942.hp1 NA18954.hp1 NA18980.hp1 NA18993.hp2 NA19001.hp1 NA19010.hp2 NA19011.hp1 NA19056.hp1 NA19084.hp1 NA19085.hp2 NA19091.hp1 NA20300.hp1	intron_variant	MODIFIER	c.1645+299dupT c.1645+299dupT	CPT2	ENSG00000157184.7	transcript	ENST00000371486.4	protein_coding	4/4	INFO_REALIGN_3_PRIME	chr1	53211600
chr1:53211600	CT CT	C C	7	a0001c0001t0001g0092 a0002c0002t0001g0080 a0003c0003t0001g0012 others(4): Show a0001c0001t0001g0092 a0002c0002t0001g0080 a0003c0003t0001g0012 a0003c0003t0001g0032 a0003c0003t0001g0082 a0003c0003t0001g0086 a0004c0004t0001g0040	13	HG01168.hp2 HG02074.hp2 HG02809.hp2 others(10): Show HG01168.hp2 HG02074.hp2 HG02809.hp2 HG03098.hp1 NA18950.hp1 NA18951.hp1 NA18972.hp2 NA18981.hp1 NA18988.hp2 NA18992.hp2 NA19065.hp2 NA19080.hp2 NA19091.hp2	intron_variant	MODIFIER	c.1645+299delT c.1645+299delT	CPT2	ENSG00000157184.7	transcript	ENST00000371486.4	protein_coding	4/4	INFO_REALIGN_3_PRIME	chr1	53211600
chr1:53211600	CTTTTTTT others(1): Show CTTTTTTTT	C C	26	a0002c0002t0001g0001 a0002c0002t0001g0014 a0002c0002t0001g0022 others(23): Show a0002c0002t0001g0001 a0002c0002t0001g0014 a0002c0002t0001g0022 a0002c0002t0001g0023 a0002c0002t0001g0024 a0002c0002t0001g0034 a0002c0002t0001g0035 a0002c0002t0001g0036 a0002c0002t0001g0104 a0002c0002t0001g0105 a0002c0002t0001g0106 a0002c0002t0001g0107 a0002c0002t0001g0108 a0002c0002t0001g0109 a0002c0002t0001g0110 a0002c0002t0001g0111 a0002c0002t0001g0112 a0002c0002t0001g0113 a0002c0002t0001g0114 a0002c0007t0001g0001 a0002c0010t0001g0001 a0002c0017t0001g0001 a0006c0009t0001g0001 a0006c0009t0001g0023 a0009c0013t0001g0001 a0010c0011t0001g0001	84	HG00140.hp2 HG00323.hp1 HG00323.hp2 others(81): Show HG00140.hp2 HG00323.hp1 HG00323.hp2 HG00438.hp1 HG00558.hp2 HG00597.hp2 HG01070.hp2 HG01071.hp1 HG01081.hp1 HG01099.hp2 HG01123.hp2 HG01175.hp1 HG01243.hp2 HG01255.hp2 HG01258.hp2 HG01346.hp2 HG01358.hp1 HG01361.hp2 HG01515.hp2 HG02015.hp1 HG02040.hp1 HG02080.hp1 HG02083.hp1 HG02109.hp2 HG02132.hp1 HG02148.hp2 HG02165.hp2 HG02273.hp2 HG03017.hp1 HG03195.hp1 HG03831.hp2 HG03927.hp1 HG04199.hp1 NA18939.hp1 NA18944.hp1 NA18944.hp2 NA18948.hp1 NA18948.hp2 NA18949.hp1 NA18951.hp2 NA18954.hp2 NA18959.hp1 NA18960.hp1 NA18961.hp1 NA18961.hp2 NA18969.hp1 NA18970.hp1 NA18973.hp2 NA18977.hp1 NA18980.hp2 NA18981.hp2 NA18983.hp2 NA18986.hp2 NA18990.hp1 NA18991.hp1 NA18992.hp1 NA18994.hp2 NA18997.hp1 NA18998.hp2 NA18999.hp2 NA19000.hp2 NA19001.hp2 NA19003.hp1 NA19006.hp2 NA19009.hp1 NA19011.hp2 NA19055.hp1 NA19056.hp2 NA19062.hp1 NA19065.hp1 NA19067.hp2 NA19070.hp1 NA19076.hp2 NA19079.hp1 NA19079.hp2 NA19080.hp1 NA19083.hp1 NA19085.hp1 NA19086.hp2 NA19088.hp1 NA19088.hp2 NA19089.hp1 NA20752.hp2 homoSapiens_chm13v2.hp1	intron_variant	MODIFIER	c.1645+292_1645+299d others(10): Show c.1645+292_1645+299delTTTTTTTT	CPT2	ENSG00000157184.7	transcript	ENST00000371486.4	protein_coding	4/4	INFO_REALIGN_3_PRIME	chr1	53211600
chr1:53211605	T T	C C	1	a0003c0003t0001g0032 a0003c0003t0001g0032	2	NA18950.hp1 NA19091.hp2 NA18950.hp1 NA19091.hp2	intron_variant	MODIFIER	c.1645+286T>C c.1645+286T>C	CPT2	ENSG00000157184.7	transcript	ENST00000371486.4	protein_coding	4/4		chr1	53211605
chr1:53211669	G G	A A	2	a0001c0001t0001g0029 a0001c0001t0001g0071 a0001c0001t0001g0029 a0001c0001t0001g0071	3	HG01433.hp2 HG02735.hp2 HG03492.hp1 HG01433.hp2 HG02735.hp2 HG03492.hp1	intron_variant	MODIFIER	c.1645+350G>A c.1645+350G>A	CPT2	ENSG00000157184.7	transcript	ENST00000371486.4	protein_coding	4/4		chr1	53211669
chr1:53211693	G G	C C	1	a0004c0004t0001g0101 a0004c0004t0001g0101	1	HG00558.hp1 HG00558.hp1	intron_variant	MODIFIER	c.1645+374G>C c.1645+374G>C	CPT2	ENSG00000157184.7	transcript	ENST00000371486.4	protein_coding	4/4		chr1	53211693
chr1:53211748	G G	T T	1	a0001c0001t0001g0057 a0001c0001t0001g0057	1	NA20129.hp1 NA20129.hp1	intron_variant	MODIFIER	c.1645+429G>T c.1645+429G>T	CPT2	ENSG00000157184.7	transcript	ENST00000371486.4	protein_coding	4/4		chr1	53211748
chr1:53211861	A A	T T	1	a0002c0002t0001g0112 a0002c0002t0001g0112	1	NA19088.hp1 NA19088.hp1	intron_variant	MODIFIER	c.1645+542A>T c.1645+542A>T	CPT2	ENSG00000157184.7	transcript	ENST00000371486.4	protein_coding	4/4		chr1	53211861
chr1:53211891	A A	G G	72	a0001c0001t0001g0009 a0001c0001t0001g0021 a0001c0001t0001g0026 others(69): Show a0001c0001t0001g0009 a0001c0001t0001g0021 a0001c0001t0001g0026 a0001c0001t0001g0042 a0001c0001t0001g0044 a0001c0001t0001g0056 a0001c0001t0001g0091 a0001c0001t0001g0092 a0001c0001t0001g0096 a0002c0002t0001g0001 a0002c0002t0001g0014 a0002c0002t0001g0019 a0002c0002t0001g0022 a0002c0002t0001g0023 a0002c0002t0001g0024 a0002c0002t0001g0034 a0002c0002t0001g0035 a0002c0002t0001g0036 a0002c0002t0001g0076 a0002c0002t0001g0080 a0002c0002t0001g0084 a0002c0002t0001g0104 a0002c0002t0001g0105 a0002c0002t0001g0106 a0002c0002t0001g0107 a0002c0002t0001g0108 a0002c0002t0001g0109 a0002c0002t0001g0110 a0002c0002t0001g0111 a0002c0002t0001g0112 a0002c0002t0001g0113 a0002c0002t0001g0114 a0002c0007t0001g0001 a0002c0010t0001g0001 a0002c0017t0001g0001 a0003c0003t0001g0005 a0003c0003t0001g0012 a0003c0003t0001g0032 a0003c0003t0001g0033 a0003c0003t0001g0061 a0003c0003t0001g0082 a0003c0003t0001g0083 a0003c0003t0001g0085 a0003c0003t0001g0086 a0003c0003t0001g0087 a0003c0003t0001g0088 a0003c0003t0001g0089 a0003c0003t0001g0090 a0004c0004t0001g0007 a0004c0004t0001g0016 a0004c0004t0001g0025 a0004c0004t0001g0037 a0004c0004t0001g0038 a0004c0004t0001g0039 a0004c0004t0001g0040 a0004c0004t0001g0041 a0004c0004t0001g0077 a0004c0004t0001g0079 a0004c0004t0001g0081 a0004c0004t0001g0093 a0004c0004t0001g0099 a0004c0004t0001g0100 a0004c0004t0001g0101 a0004c0004t0001g0102 a0005c0008t0001g0031 a0006c0009t0001g0001 a0006c0009t0001g0023 a0007c0014t0001g0078 a0008c0012t0001g0025 a0009c0013t0001g0001 a0010c0011t0001g0001 a0012c0016t0001g0019	188	HG00140.hp2 HG00323.hp1 HG00323.hp2 others(185): Show HG00140.hp2 HG00323.hp1 HG00323.hp2 HG00408.hp2 HG00438.hp1 HG00438.hp2 HG00544.hp1 HG00544.hp2 HG00558.hp1 HG00558.hp2 HG00597.hp2 HG00741.hp2 HG01070.hp2 HG01071.hp1 HG01081.hp1 HG01081.hp2 HG01099.hp2 HG01106.hp2 HG01123.hp2 HG01167.hp1 HG01168.hp2 HG01169.hp2 HG01175.hp1 HG01243.hp2 HG01255.hp1 HG01255.hp2 HG01258.hp2 HG01346.hp1 HG01346.hp2 HG01358.hp1 HG01358.hp2 HG01361.hp2 HG01515.hp2 HG01975.hp2 HG02015.hp1 HG02015.hp2 HG02027.hp2 HG02040.hp1 HG02040.hp2 HG02055.hp1 HG02071.hp1 HG02074.hp2 HG02080.hp1 HG02083.hp1 HG02083.hp2 HG02109.hp2 HG02132.hp1 HG02132.hp2 HG02148.hp2 HG02165.hp1 HG02165.hp2 HG02273.hp2 HG02300.hp2 HG02486.hp1 HG02622.hp1 HG02630.hp1 HG02683.hp2 HG02809.hp2 HG02818.hp1 HG02818.hp2 HG03017.hp1 HG03098.hp1 HG03139.hp2 HG03195.hp1 HG03225.hp1 HG03486.hp1 HG03831.hp1 HG03831.hp2 HG03927.hp1 HG04199.hp1 HG04228.hp1 HG04228.hp2 NA18612.hp2 NA18906.hp2 NA18939.hp1 NA18939.hp2 NA18942.hp1 NA18944.hp1 NA18944.hp2 NA18945.hp2 NA18946.hp2 NA18948.hp1 NA18948.hp2 NA18949.hp1 NA18949.hp2 NA18950.hp1 NA18951.hp1 NA18951.hp2 NA18953.hp1 NA18954.hp2 NA18959.hp1 NA18960.hp1 NA18960.hp2 NA18961.hp1 NA18961.hp2 NA18963.hp2 NA18965.hp2 NA18969.hp1 NA18970.hp1 NA18970.hp2 NA18971.hp1 NA18971.hp2 NA18972.hp1 NA18972.hp2 NA18973.hp1 NA18973.hp2 NA18977.hp1 NA18977.hp2 NA18980.hp1 NA18980.hp2 NA18981.hp1 NA18981.hp2 NA18982.hp1 NA18983.hp2 NA18986.hp1 NA18986.hp2 NA18988.hp2 NA18990.hp1 NA18991.hp1 NA18992.hp1 NA18992.hp2 NA18993.hp2 NA18994.hp2 NA18997.hp1 NA18997.hp2 NA18998.hp1 NA18998.hp2 NA18999.hp2 NA19000.hp2 NA19001.hp1 NA19001.hp2 NA19003.hp1 NA19003.hp2 NA19004.hp1 NA19005.hp1 NA19006.hp2 NA19007.hp1 NA19007.hp2 NA19009.hp1 NA19010.hp2 NA19011.hp1 NA19011.hp2 NA19030.hp2 NA19054.hp1 NA19055.hp1 NA19055.hp2 NA19056.hp2 NA19058.hp1 NA19062.hp1 NA19062.hp2 NA19063.hp1 NA19063.hp2 NA19064.hp1 NA19065.hp1 NA19065.hp2 NA19066.hp2 NA19067.hp2 NA19068.hp2 NA19070.hp1 NA19070.hp2 NA19074.hp1 NA19074.hp2 NA19075.hp2 NA19076.hp1 NA19076.hp2 NA19079.hp1 NA19079.hp2 NA19080.hp1 NA19080.hp2 NA19081.hp2 NA19083.hp1 NA19083.hp2 NA19084.hp2 NA19085.hp1 NA19085.hp2 NA19086.hp1 NA19086.hp2 NA19088.hp1 NA19088.hp2 NA19089.hp1 NA19089.hp2 NA19091.hp1 NA19091.hp2 NA20129.hp2 NA20300.hp1 NA20300.hp2 NA20752.hp2 homoSapiens_chm13v2.hp1	intron_variant	MODIFIER	c.1645+572A>G c.1645+572A>G	CPT2	ENSG00000157184.7	transcript	ENST00000371486.4	protein_coding	4/4		chr1	53211891
chr1:53212059	A A	C C	26	a0002c0002t0001g0019 a0002c0002t0001g0076 a0002c0002t0001g0080 others(23): Show a0002c0002t0001g0019 a0002c0002t0001g0076 a0002c0002t0001g0080 a0002c0002t0001g0084 a0003c0003t0001g0005 a0003c0003t0001g0012 a0003c0003t0001g0032 a0003c0003t0001g0033 a0003c0003t0001g0061 a0003c0003t0001g0082 a0003c0003t0001g0083 a0003c0003t0001g0085 a0003c0003t0001g0086 a0003c0003t0001g0087 a0003c0003t0001g0088 a0003c0003t0001g0089 a0003c0003t0001g0090 a0004c0004t0001g0016 a0004c0004t0001g0081 a0004c0004t0001g0093 a0004c0004t0001g0099 a0004c0004t0001g0100 a0004c0004t0001g0101 a0004c0004t0001g0102 a0005c0008t0001g0031 a0012c0016t0001g0019	58	HG00408.hp2 HG00544.hp2 HG00558.hp1 others(55): Show HG00408.hp2 HG00544.hp2 HG00558.hp1 HG00741.hp2 HG01255.hp1 HG01975.hp2 HG02027.hp2 HG02055.hp1 HG02071.hp1 HG02074.hp2 HG02132.hp2 HG02630.hp1 HG02818.hp1 HG03098.hp1 HG03225.hp1 NA18612.hp2 NA18906.hp2 NA18945.hp2 NA18946.hp2 NA18950.hp1 NA18951.hp1 NA18953.hp1 NA18960.hp2 NA18965.hp2 NA18970.hp2 NA18971.hp2 NA18972.hp1 NA18972.hp2 NA18973.hp1 NA18977.hp2 NA18981.hp1 NA18986.hp1 NA18988.hp2 NA18992.hp2 NA18997.hp2 NA18998.hp1 NA19003.hp2 NA19004.hp1 NA19030.hp2 NA19054.hp1 NA19055.hp2 NA19058.hp1 NA19062.hp2 NA19063.hp1 NA19063.hp2 NA19064.hp1 NA19065.hp2 NA19066.hp2 NA19068.hp2 NA19070.hp2 NA19074.hp1 NA19076.hp1 NA19080.hp2 NA19084.hp2 NA19086.hp1 NA19091.hp2 NA20129.hp2 NA20300.hp1	intron_variant	MODIFIER	c.1645+740A>C c.1645+740A>C	CPT2	ENSG00000157184.7	transcript	ENST00000371486.4	protein_coding	4/4		chr1	53212059
chr1:53212067	A A	AT AT	114	a0001c0001t0001g0002 a0001c0001t0001g0003 a0001c0001t0001g0004 others(111): Show a0001c0001t0001g0002 a0001c0001t0001g0003 a0001c0001t0001g0004 a0001c0001t0001g0008 a0001c0001t0001g0009 a0001c0001t0001g0010 a0001c0001t0001g0011 a0001c0001t0001g0013 a0001c0001t0001g0015 a0001c0001t0001g0017 a0001c0001t0001g0018 a0001c0001t0001g0020 a0001c0001t0001g0021 a0001c0001t0001g0026 a0001c0001t0001g0027 a0001c0001t0001g0028 a0001c0001t0001g0029 a0001c0001t0001g0030 a0001c0001t0001g0043 a0001c0001t0001g0044 a0001c0001t0001g0045 a0001c0001t0001g0046 a0001c0001t0001g0047 a0001c0001t0001g0048 a0001c0001t0001g0050 a0001c0001t0001g0051 a0001c0001t0001g0052 a0001c0001t0001g0053 a0001c0001t0001g0055 a0001c0001t0001g0057 a0001c0001t0001g0058 a0001c0001t0001g0059 a0001c0001t0001g0060 a0001c0001t0001g0062 a0001c0001t0001g0063 a0001c0001t0001g0064 a0001c0001t0001g0065 a0001c0001t0001g0066 a0001c0001t0001g0067 a0001c0001t0001g0068 a0001c0001t0001g0069 a0001c0001t0001g0070 a0001c0001t0001g0071 a0001c0001t0001g0073 a0001c0001t0001g0074 a0001c0001t0001g0075 a0001c0001t0001g0091 a0001c0001t0001g0092 a0001c0001t0001g0096 a0001c0001t0001g0098 a0001c0001t0001g0103 a0001c0006t0001g0004 a0001c0006t0001g0072 a0002c0002t0001g0001 a0002c0002t0001g0014 a0002c0002t0001g0019 a0002c0002t0001g0022 a0002c0002t0001g0023 a0002c0002t0001g0024 a0002c0002t0001g0034 a0002c0002t0001g0035 a0002c0002t0001g0036 a0002c0002t0001g0076 a0002c0002t0001g0080 a0002c0002t0001g0084 a0002c0002t0001g0104 a0002c0002t0001g0105 a0002c0002t0001g0106 a0002c0002t0001g0107 a0002c0002t0001g0108 a0002c0002t0001g0110 a0002c0002t0001g0111 a0002c0002t0001g0112 a0002c0002t0001g0113 a0002c0007t0001g0001 a0002c0010t0001g0001 a0002c0017t0001g0001 a0003c0003t0001g0005 a0003c0003t0001g0012 a0003c0003t0001g0032 a0003c0003t0001g0033 a0003c0003t0001g0061 a0003c0003t0001g0082 a0003c0003t0001g0083 a0003c0003t0001g0085 a0003c0003t0001g0086 a0003c0003t0001g0087 a0003c0003t0001g0088 a0003c0003t0001g0089 a0003c0003t0001g0090 a0004c0004t0001g0007 a0004c0004t0001g0016 a0004c0004t0001g0025 a0004c0004t0001g0037 a0004c0004t0001g0038 a0004c0004t0001g0040 a0004c0004t0001g0041 a0004c0004t0001g0077 a0004c0004t0001g0079 a0004c0004t0001g0081 a0004c0004t0001g0093 a0004c0004t0001g0099 a0004c0004t0001g0100 a0004c0004t0001g0101 a0004c0004t0001g0102 a0005c0008t0001g0031 a0006c0009t0001g0001 a0006c0009t0001g0023 a0007c0014t0001g0078 a0008c0012t0001g0025 a0009c0013t0001g0001 a0010c0011t0001g0001 a0011c0015t0001g0004 a0012c0016t0001g0019	359	HG00140.hp1 HG00140.hp2 HG00323.hp1 others(356): Show HG00140.hp1 HG00140.hp2 HG00323.hp1 HG00323.hp2 HG00408.hp1 HG00408.hp2 HG00438.hp1 HG00438.hp2 HG00544.hp1 HG00544.hp2 HG00558.hp1 HG00558.hp2 HG00597.hp1 HG00597.hp2 HG00639.hp1 HG00639.hp2 HG00642.hp1 HG00735.hp1 HG00738.hp1 HG00738.hp2 HG00741.hp1 HG00741.hp2 HG01070.hp1 HG01070.hp2 HG01071.hp1 HG01071.hp2 HG01074.hp1 HG01074.hp2 HG01081.hp1 HG01081.hp2 HG01099.hp1 HG01099.hp2 HG01106.hp1 HG01106.hp2 HG01123.hp1 HG01123.hp2 HG01167.hp1 HG01167.hp2 HG01168.hp1 HG01168.hp2 HG01169.hp1 HG01175.hp1 HG01192.hp1 HG01243.hp1 HG01243.hp2 HG01255.hp1 HG01255.hp2 HG01258.hp1 HG01258.hp2 HG01346.hp1 HG01346.hp2 HG01358.hp1 HG01358.hp2 HG01361.hp1 HG01361.hp2 HG01433.hp1 HG01433.hp2 HG01515.hp1 HG01515.hp2 HG01516.hp1 HG01516.hp2 HG01517.hp1 HG01517.hp2 HG01884.hp1 HG01884.hp2 HG01891.hp1 HG01943.hp1 HG01943.hp2 HG01952.hp1 HG01952.hp2 HG01975.hp1 HG01975.hp2 HG01981.hp1 HG01981.hp2 HG01993.hp1 HG01993.hp2 HG02004.hp1 HG02004.hp2 HG02015.hp1 HG02015.hp2 HG02027.hp1 HG02027.hp2 HG02040.hp1 HG02040.hp2 HG02055.hp1 HG02055.hp2 HG02071.hp1 HG02071.hp2 HG02074.hp1 HG02074.hp2 HG02080.hp1 HG02080.hp2 HG02083.hp1 HG02083.hp2 HG02109.hp1 HG02109.hp2 HG02132.hp1 HG02132.hp2 HG02145.hp2 HG02148.hp1 HG02148.hp2 HG02165.hp1 HG02165.hp2 HG02257.hp1 HG02257.hp2 HG02258.hp1 HG02258.hp2 HG02273.hp1 HG02273.hp2 HG02280.hp1 HG02280.hp2 HG02293.hp1 HG02293.hp2 HG02300.hp1 HG02300.hp2 HG02451.hp2 HG02559.hp1 HG02559.hp2 HG02572.hp1 HG02572.hp2 HG02602.hp1 HG02602.hp2 HG02615.hp1 HG02622.hp1 HG02622.hp2 HG02630.hp1 HG02647.hp1 HG02647.hp2 HG02683.hp1 HG02683.hp2 HG02698.hp1 HG02698.hp2 HG02717.hp1 HG02717.hp2 HG02723.hp1 HG02735.hp1 HG02735.hp2 HG02738.hp1 HG02738.hp2 HG02809.hp1 HG02809.hp2 HG02818.hp1 HG02818.hp2 HG02895.hp1 HG02895.hp2 HG02896.hp1 HG02896.hp2 HG02897.hp1 HG02897.hp2 HG02922.hp1 HG02965.hp1 HG02965.hp2 HG03017.hp1 HG03017.hp2 HG03041.hp1 HG03041.hp2 HG03098.hp1 HG03130.hp1 HG03130.hp2 HG03139.hp2 HG03195.hp1 HG03209.hp1 HG03209.hp2 HG03225.hp1 HG03225.hp2 HG03453.hp1 HG03471.hp1 HG03471.hp2 HG03492.hp1 HG03492.hp2 HG03516.hp1 HG03516.hp2 HG03540.hp1 HG03540.hp2 HG03579.hp1 HG03579.hp2 HG03654.hp1 HG03654.hp2 HG03669.hp1 HG03669.hp2 HG03688.hp1 HG03688.hp2 HG03831.hp1 HG03831.hp2 HG03834.hp1 HG03834.hp2 HG03927.hp1 HG03927.hp2 HG04115.hp1 HG04115.hp2 HG04184.hp1 HG04184.hp2 HG04199.hp1 HG04199.hp2 HG04204.hp1 HG04204.hp2 HG04228.hp1 HG04228.hp2 HG06807.hp1 HG06807.hp2 NA18522.hp1 NA18522.hp2 NA18612.hp1 NA18612.hp2 NA18906.hp1 NA18906.hp2 NA18939.hp1 NA18939.hp2 NA18941.hp1 NA18941.hp2 NA18942.hp1 NA18942.hp2 NA18944.hp1 NA18944.hp2 NA18945.hp1 NA18945.hp2 NA18946.hp1 NA18946.hp2 NA18948.hp2 NA18949.hp1 NA18949.hp2 NA18950.hp1 NA18950.hp2 NA18951.hp1 NA18951.hp2 NA18953.hp1 NA18953.hp2 NA18954.hp1 NA18954.hp2 NA18959.hp1 NA18959.hp2 NA18960.hp1 NA18960.hp2 NA18961.hp1 NA18961.hp2 NA18963.hp1 NA18963.hp2 NA18965.hp1 NA18965.hp2 NA18969.hp1 NA18969.hp2 NA18970.hp1 NA18970.hp2 NA18971.hp1 NA18971.hp2 NA18972.hp1 NA18972.hp2 NA18973.hp1 NA18973.hp2 NA18977.hp1 NA18977.hp2 NA18980.hp1 NA18980.hp2 NA18981.hp1 NA18981.hp2 NA18982.hp1 NA18982.hp2 NA18983.hp1 NA18983.hp2 NA18986.hp1 NA18986.hp2 NA18988.hp1 NA18988.hp2 NA18990.hp1 NA18990.hp2 NA18991.hp1 NA18991.hp2 NA18992.hp1 NA18992.hp2 NA18993.hp2 NA18994.hp1 NA18994.hp2 NA18997.hp1 NA18997.hp2 NA18998.hp1 NA18998.hp2 NA18999.hp1 NA18999.hp2 NA19000.hp1 NA19000.hp2 NA19001.hp1 NA19001.hp2 NA19003.hp1 NA19003.hp2 NA19004.hp1 NA19004.hp2 NA19005.hp1 NA19005.hp2 NA19006.hp1 NA19006.hp2 NA19007.hp1 NA19007.hp2 NA19009.hp1 NA19009.hp2 NA19010.hp1 NA19010.hp2 NA19011.hp1 NA19011.hp2 NA19030.hp1 NA19030.hp2 NA19043.hp2 NA19054.hp1 NA19054.hp2 NA19055.hp1 NA19055.hp2 NA19056.hp1 NA19058.hp1 NA19058.hp2 NA19062.hp1 NA19062.hp2 NA19063.hp1 NA19063.hp2 NA19064.hp1 NA19064.hp2 NA19065.hp1 NA19065.hp2 NA19066.hp1 NA19066.hp2 NA19067.hp1 NA19067.hp2 NA19068.hp1 NA19068.hp2 NA19070.hp1 NA19070.hp2 NA19074.hp1 NA19074.hp2 NA19075.hp1 NA19075.hp2 NA19076.hp1 NA19076.hp2 NA19079.hp1 NA19079.hp2 NA19080.hp1 NA19080.hp2 NA19081.hp1 NA19081.hp2 NA19083.hp1 NA19083.hp2 NA19084.hp1 NA19084.hp2 NA19085.hp1 NA19085.hp2 NA19086.hp1 NA19086.hp2 NA19088.hp1 NA19088.hp2 NA19089.hp1 NA19089.hp2 NA19091.hp1 NA19091.hp2 NA19240.hp1 NA20129.hp1 NA20129.hp2 NA20300.hp1 NA20300.hp2 NA20752.hp1 NA20752.hp2 NA21309.hp1 homoSapiens_chm13v2.hp1	intron_variant	MODIFIER	c.1645+763dupT c.1645+763dupT	CPT2	ENSG00000157184.7	transcript	ENST00000371486.4	protein_coding	4/4	INFO_REALIGN_3_PRIME	chr1	53212067
chr1:53212067	A A	ATT ATT	6	a0001c0001t0001g0006 a0001c0001t0001g0049 a0001c0001t0001g0056 others(3): Show a0001c0001t0001g0006 a0001c0001t0001g0049 a0001c0001t0001g0056 a0001c0005t0001g0006 a0001c0005t0001g0094 a0001c0005t0001g0097	21	HG00642.hp2 HG00735.hp2 HG01175.hp2 others(18): Show HG00642.hp2 HG00735.hp2 HG01175.hp2 HG01192.hp2 HG01891.hp2 HG02145.hp1 HG02451.hp1 HG02486.hp1 HG02486.hp2 HG02615.hp2 HG02630.hp2 HG02723.hp2 HG02922.hp2 HG03098.hp2 HG03139.hp1 HG03195.hp2 HG03453.hp2 HG03486.hp2 NA19043.hp1 NA19240.hp2 NA21309.hp2	intron_variant	MODIFIER	c.1645+762_1645+763d others(4): Show c.1645+762_1645+763dupTT	CPT2	ENSG00000157184.7	transcript	ENST00000371486.4	protein_coding	4/4	INFO_REALIGN_3_PRIME	chr1	53212067
chr1:53212167	C C	T T	2	a0002c0002t0001g0022 a0002c0002t0001g0109 a0002c0002t0001g0022 a0002c0002t0001g0109	4	NA18961.hp1 NA19056.hp2 NA19062.hp1 others(1): Show NA18961.hp1 NA19056.hp2 NA19062.hp1 NA19079.hp2	intron_variant	MODIFIER	c.1645+848C>T c.1645+848C>T	CPT2	ENSG00000157184.7	transcript	ENST00000371486.4	protein_coding	4/4		chr1	53212167
chr1:53212209	C C	T T	1	a0001c0001t0001g0055 a0001c0001t0001g0055	1	NA19005.hp2 NA19005.hp2	intron_variant	MODIFIER	c.1645+890C>T c.1645+890C>T	CPT2	ENSG00000157184.7	transcript	ENST00000371486.4	protein_coding	4/4		chr1	53212209
chr1:53212247	T T	C C	1	a0004c0004t0001g0081 a0004c0004t0001g0081	1	HG00544.hp2 HG00544.hp2	intron_variant	MODIFIER	c.1645+928T>C c.1645+928T>C	CPT2	ENSG00000157184.7	transcript	ENST00000371486.4	protein_coding	4/4		chr1	53212247
chr1:53212555	A A	G G	2	a0004c0004t0001g0025 a0008c0012t0001g0025 a0004c0004t0001g0025 a0008c0012t0001g0025	2	HG01346.hp1 HG02300.hp2 HG01346.hp1 HG02300.hp2	intron_variant	MODIFIER	c.1646-709A>G c.1646-709A>G	CPT2	ENSG00000157184.7	transcript	ENST00000371486.4	protein_coding	4/4		chr1	53212555
chr1:53212882	A A	G G	65	a0001c0001t0001g0026 a0001c0001t0001g0044 a0002c0002t0001g0001 others(62): Show a0001c0001t0001g0026 a0001c0001t0001g0044 a0002c0002t0001g0001 a0002c0002t0001g0014 a0002c0002t0001g0019 a0002c0002t0001g0022 a0002c0002t0001g0023 a0002c0002t0001g0024 a0002c0002t0001g0034 a0002c0002t0001g0035 a0002c0002t0001g0036 a0002c0002t0001g0076 a0002c0002t0001g0080 a0002c0002t0001g0084 a0002c0002t0001g0104 a0002c0002t0001g0105 a0002c0002t0001g0106 a0002c0002t0001g0107 a0002c0002t0001g0108 a0002c0002t0001g0109 a0002c0002t0001g0110 a0002c0002t0001g0111 a0002c0002t0001g0112 a0002c0002t0001g0113 a0002c0002t0001g0114 a0002c0007t0001g0001 a0002c0010t0001g0001 a0002c0017t0001g0001 a0003c0003t0001g0005 a0003c0003t0001g0012 a0003c0003t0001g0032 a0003c0003t0001g0033 a0003c0003t0001g0061 a0003c0003t0001g0082 a0003c0003t0001g0083 a0003c0003t0001g0085 a0003c0003t0001g0086 a0003c0003t0001g0087 a0003c0003t0001g0088 a0003c0003t0001g0089 a0003c0003t0001g0090 a0004c0004t0001g0007 a0004c0004t0001g0016 a0004c0004t0001g0025 a0004c0004t0001g0037 a0004c0004t0001g0038 a0004c0004t0001g0039 a0004c0004t0001g0040 a0004c0004t0001g0041 a0004c0004t0001g0077 a0004c0004t0001g0079 a0004c0004t0001g0081 a0004c0004t0001g0093 a0004c0004t0001g0099 a0004c0004t0001g0100 a0004c0004t0001g0101 a0004c0004t0001g0102 a0005c0008t0001g0031 a0006c0009t0001g0001 a0006c0009t0001g0023 a0007c0014t0001g0078 a0008c0012t0001g0025 a0009c0013t0001g0001 a0010c0011t0001g0001 a0012c0016t0001g0019	171	HG00140.hp2 HG00323.hp1 HG00323.hp2 others(168): Show HG00140.hp2 HG00323.hp1 HG00323.hp2 HG00408.hp2 HG00438.hp1 HG00438.hp2 HG00544.hp1 HG00544.hp2 HG00558.hp1 HG00558.hp2 HG00597.hp2 HG00741.hp2 HG01070.hp2 HG01071.hp1 HG01081.hp1 HG01081.hp2 HG01099.hp2 HG01106.hp2 HG01123.hp2 HG01167.hp1 HG01168.hp2 HG01169.hp2 HG01175.hp1 HG01243.hp2 HG01255.hp1 HG01255.hp2 HG01258.hp2 HG01346.hp1 HG01346.hp2 HG01358.hp1 HG01358.hp2 HG01361.hp2 HG01515.hp2 HG01975.hp2 HG02015.hp1 HG02015.hp2 HG02027.hp2 HG02040.hp1 HG02055.hp1 HG02071.hp1 HG02074.hp2 HG02080.hp1 HG02083.hp1 HG02109.hp2 HG02132.hp1 HG02132.hp2 HG02148.hp2 HG02165.hp1 HG02165.hp2 HG02273.hp2 HG02300.hp2 HG02630.hp1 HG02683.hp2 HG02818.hp1 HG02818.hp2 HG03017.hp1 HG03098.hp1 HG03139.hp2 HG03195.hp1 HG03225.hp1 HG03831.hp1 HG03831.hp2 HG03927.hp1 HG04199.hp1 HG04228.hp2 NA18612.hp2 NA18906.hp2 NA18939.hp1 NA18944.hp1 NA18944.hp2 NA18945.hp2 NA18946.hp2 NA18948.hp1 NA18948.hp2 NA18949.hp1 NA18949.hp2 NA18950.hp1 NA18951.hp1 NA18951.hp2 NA18953.hp1 NA18954.hp2 NA18959.hp1 NA18960.hp1 NA18960.hp2 NA18961.hp1 NA18961.hp2 NA18963.hp2 NA18965.hp2 NA18969.hp1 NA18970.hp1 NA18970.hp2 NA18971.hp1 NA18971.hp2 NA18972.hp1 NA18972.hp2 NA18973.hp1 NA18973.hp2 NA18977.hp1 NA18977.hp2 NA18980.hp2 NA18981.hp1 NA18981.hp2 NA18982.hp1 NA18983.hp2 NA18986.hp1 NA18986.hp2 NA18988.hp2 NA18990.hp1 NA18991.hp1 NA18992.hp1 NA18992.hp2 NA18994.hp2 NA18997.hp1 NA18997.hp2 NA18998.hp1 NA18998.hp2 NA18999.hp2 NA19000.hp2 NA19001.hp2 NA19003.hp1 NA19003.hp2 NA19004.hp1 NA19005.hp1 NA19006.hp2 NA19007.hp1 NA19007.hp2 NA19009.hp1 NA19011.hp2 NA19030.hp2 NA19054.hp1 NA19055.hp1 NA19055.hp2 NA19056.hp2 NA19058.hp1 NA19062.hp1 NA19062.hp2 NA19063.hp1 NA19063.hp2 NA19064.hp1 NA19065.hp1 NA19065.hp2 NA19066.hp2 NA19067.hp2 NA19068.hp2 NA19070.hp1 NA19070.hp2 NA19074.hp1 NA19074.hp2 NA19075.hp2 NA19076.hp1 NA19076.hp2 NA19079.hp1 NA19079.hp2 NA19080.hp1 NA19080.hp2 NA19081.hp2 NA19083.hp1 NA19084.hp2 NA19085.hp1 NA19086.hp1 NA19086.hp2 NA19088.hp1 NA19088.hp2 NA19089.hp1 NA19089.hp2 NA19091.hp2 NA20129.hp2 NA20300.hp1 NA20300.hp2 NA20752.hp2 homoSapiens_chm13v2.hp1	intron_variant	MODIFIER	c.1646-382A>G c.1646-382A>G	CPT2	ENSG00000157184.7	transcript	ENST00000371486.4	protein_coding	4/4		chr1	53212882
chr1:53213056	C C	T T	8	a0001c0001t0001g0003 a0001c0001t0001g0015 a0001c0001t0001g0027 others(5): Show a0001c0001t0001g0003 a0001c0001t0001g0015 a0001c0001t0001g0027 a0001c0001t0001g0047 a0001c0001t0001g0054 a0001c0001t0001g0055 a0001c0001t0001g0058 a0001c0001t0001g0063	42	HG01099.hp1 HG01123.hp1 HG01952.hp2 others(39): Show HG01099.hp1 HG01123.hp1 HG01952.hp2 HG01981.hp1 HG01981.hp2 HG01993.hp1 HG02004.hp1 HG02074.hp1 HG02080.hp2 HG02148.hp1 HG02273.hp1 HG02293.hp1 HG02293.hp2 HG02300.hp1 HG02683.hp1 HG02698.hp1 HG02738.hp1 HG03492.hp2 HG03669.hp1 NA18941.hp2 NA18954.hp1 NA18959.hp2 NA18963.hp1 NA18965.hp1 NA18969.hp2 NA18982.hp2 NA18983.hp1 NA18988.hp1 NA18990.hp2 NA18991.hp2 NA18993.hp1 NA18999.hp1 NA19000.hp1 NA19005.hp2 NA19009.hp2 NA19056.hp1 NA19058.hp2 NA19064.hp2 NA19066.hp1 NA19068.hp1 NA19075.hp1 NA19081.hp1	intron_variant	MODIFIER	c.1646-208C>T c.1646-208C>T	CPT2	ENSG00000157184.7	transcript	ENST00000371486.4	protein_coding	4/4		chr1	53213056

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JoGo Local Haplotype Explorer (on iGV) CPT2_chr1_53191824_53219197

Translation Multiple Alignment View

🧬 Gene Summary (with MANE)

AAmino acid(protein) Level Haplotype Info (Total: 12)

CCoding Level Haplotype Info (Total: 17)

TTranscript Level Haplotype Info (Total: 1)

GGenebody Level Haplotype Info (Total: 114)

A C AC Level (Amino Acid + Coding) Haplotype Info (Total: 17)

A C T ACT Level (Amino Acid + Coding + Transcript) Haplotype Info (Total: 17)

A C T G ACTG Level (Amino Acid + Coding + Transcript + Genebody) Haplotype Info (Total: 126)

Haplotype Details by Sample (Haploid Level) (Total: 386)

AAmino acid(protein) Level Haplotype Related Variants (Effect to Protein Coding Variants) (Total: 11)

CCoding Level Variants (On coding region but no effect to protein coding variants: Synonymous Mutations) (Total: 5)

TTranscript Level Haplotype Variants (Exon) (Total: 0)

GGenebody Level Haplotype Variants (Intron) (Total: 128)

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Annotation (Repeats)

Annotation (SNP Array)