JoGo: Joint Open Genome and Omics Platform

Search by Genic region

geneid	1203
ensemblid	ENSG00000102805.16
hgncid	2076
symbol	CLN5
name	CLN5 intracellular trafficking protein
refseq_nuc	NM_006493.4
refseq_prot	NP_006484.2
ensembl_nuc	ENST00000377453.9
ensembl_prot	ENSP00000366673.5
mane_status	MANE Select
chr	chr13
start	76992081
end	77005117
strand	+
ver	v1.2
region	chr13:76992081-77005117
region5000	chr13:76987081-77010117
regionname0	CLN5_chr13_76992081_77005117
regionname5000	CLN5_chr13_76987081_77010117

ahapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	alen	total	AFR	AMR	EAS	EUR	SAS	JPT	regionname	genename	aa	chr	start	end
a0001	1/1	358	283	49	52	135	12	33	105	CLN5_chr13_76987081_77010117	CLN5	copy fasta	chr13	76987081	77010117
a0002	0/0	358	144	45	21	73	2	3	61	CLN5_chr13_76987081_77010117	CLN5	copy fasta	chr13	76987081	77010117
a0003	0/0	358	1	1	0	0	0	0	0	CLN5_chr13_76987081_77010117	CLN5	copy fasta	chr13	76987081	77010117
a0004	0/0	358	1	1	0	0	0	0	0	CLN5_chr13_76987081_77010117	CLN5	copy fasta	chr13	76987081	77010117
a0005	0/0	358	1	0	1	0	0	0	0	CLN5_chr13_76987081_77010117	CLN5	copy fasta	chr13	76987081	77010117

chapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	clen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	cseq	chr	start	end
c0001	1/1	1077	279	49	50	134	11	33	CLN5_chr13_76987081_77010117	CLN5	copy fasta	chr13	76987081	77010117
c0002	0/0	1077	94	34	13	43	1	3	CLN5_chr13_76987081_77010117	CLN5	copy fasta	chr13	76987081	77010117
c0003	0/0	1077	33	0	2	30	1	0	CLN5_chr13_76987081_77010117	CLN5	copy fasta	chr13	76987081	77010117
c0004	0/0	1077	17	11	6	0	0	0	CLN5_chr13_76987081_77010117	CLN5	copy fasta	chr13	76987081	77010117
c0005	0/0	1077	3	0	2	0	1	0	CLN5_chr13_76987081_77010117	CLN5	copy fasta	chr13	76987081	77010117
c0006	0/0	1077	1	1	0	0	0	0	CLN5_chr13_76987081_77010117	CLN5	copy fasta	chr13	76987081	77010117
c0007	0/0	1077	1	0	0	1	0	0	CLN5_chr13_76987081_77010117	CLN5	copy fasta	chr13	76987081	77010117
c0008	0/0	1077	1	1	0	0	0	0	CLN5_chr13_76987081_77010117	CLN5	copy fasta	chr13	76987081	77010117
c0009	0/0	1077	1	0	1	0	0	0	CLN5_chr13_76987081_77010117	CLN5	copy fasta	chr13	76987081	77010117

thapid	grch38 chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	tlen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	tseq	chr	start	end
t0001	1/1	4167	231	21	48	117	10	33	CLN5_chr13_76987081_77010117	CLN5	copy fasta	chr13	76987081	77010117
t0002	0/0	4165	42	1	7	30	1	3	CLN5_chr13_76987081_77010117	CLN5	copy fasta	chr13	76987081	77010117
t0003	0/0	4164	29	0	2	27	0	0	CLN5_chr13_76987081_77010117	CLN5	copy fasta	chr13	76987081	77010117
t0004	0/0	4167	24	13	2	9	0	0	CLN5_chr13_76987081_77010117	CLN5	copy fasta	chr13	76987081	77010117
t0005	0/0	4167	16	15	1	0	0	0	CLN5_chr13_76987081_77010117	CLN5	copy fasta	chr13	76987081	77010117
t0006	0/0	4167	16	11	5	0	0	0	CLN5_chr13_76987081_77010117	CLN5	copy fasta	chr13	76987081	77010117
t0007	0/0	4167	8	8	0	0	0	0	CLN5_chr13_76987081_77010117	CLN5	copy fasta	chr13	76987081	77010117
t0008	0/0	4165	7	5	2	0	0	0	CLN5_chr13_76987081_77010117	CLN5	copy fasta	chr13	76987081	77010117
t0009	0/0	4167	6	6	0	0	0	0	CLN5_chr13_76987081_77010117	CLN5	copy fasta	chr13	76987081	77010117
t0010	0/0	4166	5	1	1	1	2	0	CLN5_chr13_76987081_77010117	CLN5	copy fasta	chr13	76987081	77010117
t0011	0/0	4167	4	0	0	4	0	0	CLN5_chr13_76987081_77010117	CLN5	copy fasta	chr13	76987081	77010117
t0012	0/0	4167	3	3	0	0	0	0	CLN5_chr13_76987081_77010117	CLN5	copy fasta	chr13	76987081	77010117
t0013	0/0	4164	3	0	0	3	0	0	CLN5_chr13_76987081_77010117	CLN5	copy fasta	chr13	76987081	77010117
t0014	0/0	4163	3	0	0	3	0	0	CLN5_chr13_76987081_77010117	CLN5	copy fasta	chr13	76987081	77010117
t0015	0/0	4167	3	3	0	0	0	0	CLN5_chr13_76987081_77010117	CLN5	copy fasta	chr13	76987081	77010117
t0016	0/0	4167	2	0	0	2	0	0	CLN5_chr13_76987081_77010117	CLN5	copy fasta	chr13	76987081	77010117
t0017	0/0	4163	2	0	0	1	1	0	CLN5_chr13_76987081_77010117	CLN5	copy fasta	chr13	76987081	77010117
t0018	0/0	4167	1	1	0	0	0	0	CLN5_chr13_76987081_77010117	CLN5	copy fasta	chr13	76987081	77010117
t0019	0/0	4167	1	0	0	1	0	0	CLN5_chr13_76987081_77010117	CLN5	copy fasta	chr13	76987081	77010117
t0020	0/0	4167	1	1	0	0	0	0	CLN5_chr13_76987081_77010117	CLN5	copy fasta	chr13	76987081	77010117
t0021	0/0	4168	1	0	0	1	0	0	CLN5_chr13_76987081_77010117	CLN5	copy fasta	chr13	76987081	77010117
t0022	0/0	4167	1	0	0	1	0	0	CLN5_chr13_76987081_77010117	CLN5	copy fasta	chr13	76987081	77010117
t0023	0/0	4156	1	0	1	0	0	0	CLN5_chr13_76987081_77010117	CLN5	copy fasta	chr13	76987081	77010117
t0024	0/0	4167	1	0	1	0	0	0	CLN5_chr13_76987081_77010117	CLN5	copy fasta	chr13	76987081	77010117
t0025	0/0	4168	1	1	0	0	0	0	CLN5_chr13_76987081_77010117	CLN5	copy fasta	chr13	76987081	77010117
t0026	0/0	4167	1	0	0	1	0	0	CLN5_chr13_76987081_77010117	CLN5	copy fasta	chr13	76987081	77010117
t0027	0/0	4167	1	1	0	0	0	0	CLN5_chr13_76987081_77010117	CLN5	copy fasta	chr13	76987081	77010117
t0028	0/0	4167	1	0	0	1	0	0	CLN5_chr13_76987081_77010117	CLN5	copy fasta	chr13	76987081	77010117
t0029	0/0	4167	1	0	0	1	0	0	CLN5_chr13_76987081_77010117	CLN5	copy fasta	chr13	76987081	77010117
t0030	0/0	4167	1	1	0	0	0	0	CLN5_chr13_76987081_77010117	CLN5	copy fasta	chr13	76987081	77010117
t0031	0/0	4167	1	0	1	0	0	0	CLN5_chr13_76987081_77010117	CLN5	copy fasta	chr13	76987081	77010117
t0032	0/0	4167	1	1	0	0	0	0	CLN5_chr13_76987081_77010117	CLN5	copy fasta	chr13	76987081	77010117
t0033	0/0	4167	1	0	0	1	0	0	CLN5_chr13_76987081_77010117	CLN5	copy fasta	chr13	76987081	77010117
t0034	0/0	4164	1	0	0	1	0	0	CLN5_chr13_76987081_77010117	CLN5	copy fasta	chr13	76987081	77010117
t0035	0/0	4164	1	0	0	1	0	0	CLN5_chr13_76987081_77010117	CLN5	copy fasta	chr13	76987081	77010117
t0036	0/0	4166	1	1	0	0	0	0	CLN5_chr13_76987081_77010117	CLN5	copy fasta	chr13	76987081	77010117
t0037	0/0	4167	1	1	0	0	0	0	CLN5_chr13_76987081_77010117	CLN5	copy fasta	chr13	76987081	77010117
t0038	0/0	4165	1	0	1	0	0	0	CLN5_chr13_76987081_77010117	CLN5	copy fasta	chr13	76987081	77010117
t0039	0/0	4168	1	1	0	0	0	0	CLN5_chr13_76987081_77010117	CLN5	copy fasta	chr13	76987081	77010117
t0040	0/0	4165	1	0	0	1	0	0	CLN5_chr13_76987081_77010117	CLN5	copy fasta	chr13	76987081	77010117
t0041	0/0	4164	1	0	0	1	0	0	CLN5_chr13_76987081_77010117	CLN5	copy fasta	chr13	76987081	77010117
t0042	0/0	4168	1	0	1	0	0	0	CLN5_chr13_76987081_77010117	CLN5	copy fasta	chr13	76987081	77010117
t0043	0/0	4167	1	0	1	0	0	0	CLN5_chr13_76987081_77010117	CLN5	copy fasta	chr13	76987081	77010117

ghapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	chr	start	end
g0001	0/0	90	8	8	59	3	12	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
g0002	0/1	85	4	20	41	7	12	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
g0003	0/0	35	6	15	11	1	2	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
g0004	0/0	27	0	2	24	1	0	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
g0005	0/0	22	1	0	17	1	3	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
g0006	0/0	17	0	6	11	0	0	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
g0007	0/0	15	15	0	0	0	0	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
g0008	0/0	14	13	1	0	0	0	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
g0009	0/0	10	6	4	0	0	0	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
g0010	0/0	9	0	2	7	0	0	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
g0011	0/0	8	8	0	0	0	0	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
g0012	0/0	5	3	2	0	0	0	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
g0013	0/0	5	0	0	5	0	0	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
g0014	0/0	4	0	0	4	0	0	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
g0015	0/0	4	2	0	1	0	1	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
g0016	0/0	4	0	0	4	0	0	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
g0017	0/0	3	1	2	0	0	0	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
g0018	0/0	3	3	0	0	0	0	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
g0019	0/0	3	3	0	0	0	0	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
g0020	0/0	3	0	1	1	0	1	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
g0021	0/0	3	0	2	0	0	1	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
g0022	0/0	3	0	0	3	0	0	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
g0023	0/0	3	3	0	0	0	0	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
g0024	0/0	3	0	0	3	0	0	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
g0025	0/0	3	0	0	3	0	0	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
g0026	0/0	2	0	2	0	0	0	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
g0027	0/0	2	2	0	0	0	0	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
g0028	0/0	2	2	0	0	0	0	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
g0029	0/0	2	0	2	0	0	0	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
g0030	0/0	2	1	1	0	0	0	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
g0031	0/0	2	0	1	1	0	0	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
g0032	0/0	1	1	0	0	0	0	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
g0033	0/0	1	0	1	0	0	0	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
g0034	0/0	1	1	0	0	0	0	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
g0035	0/0	1	1	0	0	0	0	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
g0036	0/0	1	0	0	1	0	0	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
g0037	0/0	1	1	0	0	0	0	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
g0038	0/0	1	0	0	1	0	0	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
g0039	0/0	1	1	0	0	0	0	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
g0040	0/0	1	1	0	0	0	0	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
g0041	0/0	1	1	0	0	0	0	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
g0042	0/0	1	1	0	0	0	0	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
g0043	0/0	1	1	0	0	0	0	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
g0044	0/0	1	0	0	0	1	0	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
g0045	0/0	1	1	0	0	0	0	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
g0046	0/0	1	0	0	1	0	0	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
g0047	0/0	1	0	0	1	0	0	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
g0048	0/0	1	0	0	0	0	1	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
g0049	0/0	1	0	0	0	0	1	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
g0050	0/0	1	0	0	0	0	1	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
g0051	0/0	1	0	0	0	0	1	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
g0052	0/0	1	0	0	1	0	0	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
g0053	0/0	1	0	0	1	0	0	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
g0054	1/0	1	0	0	0	0	0	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
g0055	0/0	1	0	0	1	0	0	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
g0056	0/0	1	0	0	1	0	0	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
g0057	0/0	1	0	1	0	0	0	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
g0058	0/0	1	0	0	1	0	0	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
g0059	0/0	1	0	0	1	0	0	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
g0060	0/0	1	1	0	0	0	0	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
g0061	0/0	1	1	0	0	0	0	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
g0062	0/0	1	0	0	1	0	0	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
g0063	0/0	1	0	0	1	0	0	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
g0064	0/0	1	0	0	1	0	0	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
g0065	0/0	1	1	0	0	0	0	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
g0066	0/0	1	1	0	0	0	0	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
g0067	0/0	1	1	0	0	0	0	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
g0068	0/0	1	0	1	0	0	0	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117

achapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	clen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	cseq	chr	start	end
a0001c0001	1/1	1077	279	49	50	134	11	33	CLN5_chr13_76987081_77010117	CLN5	copy fasta	chr13	76987081	77010117
a0001c0005	0/0	1077	3	0	2	0	1	0	CLN5_chr13_76987081_77010117	CLN5	copy fasta	chr13	76987081	77010117
a0001c0007	0/0	1077	1	0	0	1	0	0	CLN5_chr13_76987081_77010117	CLN5	copy fasta	chr13	76987081	77010117
a0002c0002	0/0	1077	94	34	13	43	1	3	CLN5_chr13_76987081_77010117	CLN5	copy fasta	chr13	76987081	77010117
a0002c0003	0/0	1077	33	0	2	30	1	0	CLN5_chr13_76987081_77010117	CLN5	copy fasta	chr13	76987081	77010117
a0002c0004	0/0	1077	17	11	6	0	0	0	CLN5_chr13_76987081_77010117	CLN5	copy fasta	chr13	76987081	77010117
a0003c0006	0/0	1077	1	1	0	0	0	0	CLN5_chr13_76987081_77010117	CLN5	copy fasta	chr13	76987081	77010117
a0004c0008	0/0	1077	1	1	0	0	0	0	CLN5_chr13_76987081_77010117	CLN5	copy fasta	chr13	76987081	77010117
a0005c0009	0/0	1077	1	0	1	0	0	0	CLN5_chr13_76987081_77010117	CLN5	copy fasta	chr13	76987081	77010117

acthapid	grch38 chm13v2	tlen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	tseq	chr	start	end
a0001c0001t0001	1/1	5243	225	20	45	116	9	33	CLN5_chr13_76987081_77010117	CLN5	copy fasta	chr13	76987081	77010117
a0001c0001t0005	0/0	5243	16	15	1	0	0	0	CLN5_chr13_76987081_77010117	CLN5	copy fasta	chr13	76987081	77010117
a0001c0001t0007	0/0	5243	8	8	0	0	0	0	CLN5_chr13_76987081_77010117	CLN5	copy fasta	chr13	76987081	77010117
a0001c0001t0010	0/0	5242	5	1	1	1	2	0	CLN5_chr13_76987081_77010117	CLN5	copy fasta	chr13	76987081	77010117
a0001c0001t0011	0/0	5243	4	0	0	4	0	0	CLN5_chr13_76987081_77010117	CLN5	copy fasta	chr13	76987081	77010117
a0001c0001t0013	0/0	5240	3	0	0	3	0	0	CLN5_chr13_76987081_77010117	CLN5	copy fasta	chr13	76987081	77010117
a0001c0001t0014	0/0	5239	3	0	0	3	0	0	CLN5_chr13_76987081_77010117	CLN5	copy fasta	chr13	76987081	77010117
a0001c0001t0016	0/0	5243	2	0	0	2	0	0	CLN5_chr13_76987081_77010117	CLN5	copy fasta	chr13	76987081	77010117
a0001c0001t0019	0/0	5243	1	0	0	1	0	0	CLN5_chr13_76987081_77010117	CLN5	copy fasta	chr13	76987081	77010117
a0001c0001t0023	0/0	5232	1	0	1	0	0	0	CLN5_chr13_76987081_77010117	CLN5	copy fasta	chr13	76987081	77010117
a0001c0001t0024	0/0	5243	1	0	1	0	0	0	CLN5_chr13_76987081_77010117	CLN5	copy fasta	chr13	76987081	77010117
a0001c0001t0025	0/0	5244	1	1	0	0	0	0	CLN5_chr13_76987081_77010117	CLN5	copy fasta	chr13	76987081	77010117
a0001c0001t0026	0/0	5243	1	0	0	1	0	0	CLN5_chr13_76987081_77010117	CLN5	copy fasta	chr13	76987081	77010117
a0001c0001t0027	0/0	5243	1	1	0	0	0	0	CLN5_chr13_76987081_77010117	CLN5	copy fasta	chr13	76987081	77010117
a0001c0001t0028	0/0	5243	1	0	0	1	0	0	CLN5_chr13_76987081_77010117	CLN5	copy fasta	chr13	76987081	77010117
a0001c0001t0029	0/0	5243	1	0	0	1	0	0	CLN5_chr13_76987081_77010117	CLN5	copy fasta	chr13	76987081	77010117
a0001c0001t0030	0/0	5243	1	1	0	0	0	0	CLN5_chr13_76987081_77010117	CLN5	copy fasta	chr13	76987081	77010117
a0001c0001t0031	0/0	5243	1	0	1	0	0	0	CLN5_chr13_76987081_77010117	CLN5	copy fasta	chr13	76987081	77010117
a0001c0001t0032	0/0	5243	1	1	0	0	0	0	CLN5_chr13_76987081_77010117	CLN5	copy fasta	chr13	76987081	77010117
a0001c0001t0033	0/0	5243	1	0	0	1	0	0	CLN5_chr13_76987081_77010117	CLN5	copy fasta	chr13	76987081	77010117
a0001c0001t0037	0/0	5243	1	1	0	0	0	0	CLN5_chr13_76987081_77010117	CLN5	copy fasta	chr13	76987081	77010117
a0001c0005t0001	0/0	5243	3	0	2	0	1	0	CLN5_chr13_76987081_77010117	CLN5	copy fasta	chr13	76987081	77010117
a0001c0007t0001	0/0	5243	1	0	0	1	0	0	CLN5_chr13_76987081_77010117	CLN5	copy fasta	chr13	76987081	77010117
a0002c0002t0002	0/0	5241	42	1	7	30	1	3	CLN5_chr13_76987081_77010117	CLN5	copy fasta	chr13	76987081	77010117
a0002c0002t0004	0/0	5243	24	13	2	9	0	0	CLN5_chr13_76987081_77010117	CLN5	copy fasta	chr13	76987081	77010117
a0002c0002t0008	0/0	5241	6	4	2	0	0	0	CLN5_chr13_76987081_77010117	CLN5	copy fasta	chr13	76987081	77010117
a0002c0002t0009	0/0	5243	6	6	0	0	0	0	CLN5_chr13_76987081_77010117	CLN5	copy fasta	chr13	76987081	77010117
a0002c0002t0012	0/0	5243	3	3	0	0	0	0	CLN5_chr13_76987081_77010117	CLN5	copy fasta	chr13	76987081	77010117
a0002c0002t0015	0/0	5243	3	3	0	0	0	0	CLN5_chr13_76987081_77010117	CLN5	copy fasta	chr13	76987081	77010117
a0002c0002t0018	0/0	5243	1	1	0	0	0	0	CLN5_chr13_76987081_77010117	CLN5	copy fasta	chr13	76987081	77010117
a0002c0002t0020	0/0	5243	1	1	0	0	0	0	CLN5_chr13_76987081_77010117	CLN5	copy fasta	chr13	76987081	77010117
a0002c0002t0021	0/0	5244	1	0	0	1	0	0	CLN5_chr13_76987081_77010117	CLN5	copy fasta	chr13	76987081	77010117
a0002c0002t0022	0/0	5243	1	0	0	1	0	0	CLN5_chr13_76987081_77010117	CLN5	copy fasta	chr13	76987081	77010117
a0002c0002t0036	0/0	5242	1	1	0	0	0	0	CLN5_chr13_76987081_77010117	CLN5	copy fasta	chr13	76987081	77010117
a0002c0002t0038	0/0	5241	1	0	1	0	0	0	CLN5_chr13_76987081_77010117	CLN5	copy fasta	chr13	76987081	77010117
a0002c0002t0039	0/0	5244	1	1	0	0	0	0	CLN5_chr13_76987081_77010117	CLN5	copy fasta	chr13	76987081	77010117
a0002c0002t0040	0/0	5241	1	0	0	1	0	0	CLN5_chr13_76987081_77010117	CLN5	copy fasta	chr13	76987081	77010117
a0002c0002t0041	0/0	5240	1	0	0	1	0	0	CLN5_chr13_76987081_77010117	CLN5	copy fasta	chr13	76987081	77010117
a0002c0002t0042	0/0	5244	1	0	1	0	0	0	CLN5_chr13_76987081_77010117	CLN5	copy fasta	chr13	76987081	77010117
a0002c0003t0003	0/0	5240	29	0	2	27	0	0	CLN5_chr13_76987081_77010117	CLN5	copy fasta	chr13	76987081	77010117
a0002c0003t0017	0/0	5239	2	0	0	1	1	0	CLN5_chr13_76987081_77010117	CLN5	copy fasta	chr13	76987081	77010117
a0002c0003t0034	0/0	5240	1	0	0	1	0	0	CLN5_chr13_76987081_77010117	CLN5	copy fasta	chr13	76987081	77010117
a0002c0003t0035	0/0	5240	1	0	0	1	0	0	CLN5_chr13_76987081_77010117	CLN5	copy fasta	chr13	76987081	77010117
a0002c0004t0006	0/0	5243	16	11	5	0	0	0	CLN5_chr13_76987081_77010117	CLN5	copy fasta	chr13	76987081	77010117
a0002c0004t0043	0/0	5243	1	0	1	0	0	0	CLN5_chr13_76987081_77010117	CLN5	copy fasta	chr13	76987081	77010117
a0003c0006t0001	0/0	5243	1	1	0	0	0	0	CLN5_chr13_76987081_77010117	CLN5	copy fasta	chr13	76987081	77010117
a0004c0008t0008	0/0	5241	1	1	0	0	0	0	CLN5_chr13_76987081_77010117	CLN5	copy fasta	chr13	76987081	77010117
a0005c0009t0001	0/0	5243	1	0	1	0	0	0	CLN5_chr13_76987081_77010117	CLN5	copy fasta	chr13	76987081	77010117

actghapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	chr	start	end
a0001c0001t0001g0001	0/0	78	7	8	48	3	12	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
a0001c0001t0001g0002	0/1	78	4	16	40	5	12	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
a0001c0001t0001g0003	0/0	31	5	14	10	0	2	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
a0001c0001t0001g0013	0/0	5	0	0	5	0	0	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
a0001c0001t0001g0015	0/0	2	1	0	0	0	1	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
a0001c0001t0001g0016	0/0	4	0	0	4	0	0	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
a0001c0001t0001g0020	0/0	2	0	1	0	0	1	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
a0001c0001t0001g0021	0/0	3	0	2	0	0	1	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
a0001c0001t0001g0022	0/0	3	0	0	3	0	0	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
a0001c0001t0001g0026	0/0	2	0	2	0	0	0	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
a0001c0001t0001g0027	0/0	2	2	0	0	0	0	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
a0001c0001t0001g0033	0/0	1	0	1	0	0	0	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
a0001c0001t0001g0035	0/0	1	1	0	0	0	0	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
a0001c0001t0001g0044	0/0	1	0	0	0	1	0	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
a0001c0001t0001g0046	0/0	1	0	0	1	0	0	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
a0001c0001t0001g0047	0/0	1	0	0	1	0	0	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
a0001c0001t0001g0048	0/0	1	0	0	0	0	1	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
a0001c0001t0001g0049	0/0	1	0	0	0	0	1	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
a0001c0001t0001g0050	0/0	1	0	0	0	0	1	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
a0001c0001t0001g0051	0/0	1	0	0	0	0	1	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
a0001c0001t0001g0052	0/0	1	0	0	1	0	0	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
a0001c0001t0001g0054	1/0	1	0	0	0	0	0	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
a0001c0001t0001g0055	0/0	1	0	0	1	0	0	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
a0001c0001t0001g0056	0/0	1	0	0	1	0	0	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
a0001c0001t0001g0057	0/0	1	0	1	0	0	0	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
a0001c0001t0001g0059	0/0	1	0	0	1	0	0	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
a0001c0001t0005g0008	0/0	13	12	1	0	0	0	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
a0001c0001t0005g0041	0/0	1	1	0	0	0	0	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
a0001c0001t0005g0042	0/0	1	1	0	0	0	0	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
a0001c0001t0005g0043	0/0	1	1	0	0	0	0	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
a0001c0001t0007g0011	0/0	8	8	0	0	0	0	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
a0001c0001t0010g0001	0/0	1	1	0	0	0	0	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
a0001c0001t0010g0002	0/0	2	0	1	0	1	0	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
a0001c0001t0010g0003	0/0	1	0	0	0	1	0	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
a0001c0001t0010g0015	0/0	1	0	0	1	0	0	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
a0001c0001t0011g0001	0/0	4	0	0	4	0	0	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
a0001c0001t0013g0001	0/0	3	0	0	3	0	0	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
a0001c0001t0014g0024	0/0	3	0	0	3	0	0	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
a0001c0001t0016g0001	0/0	1	0	0	1	0	0	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
a0001c0001t0016g0020	0/0	1	0	0	1	0	0	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
a0001c0001t0019g0002	0/0	1	0	0	1	0	0	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
a0001c0001t0023g0029	0/0	1	0	1	0	0	0	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
a0001c0001t0024g0003	0/0	1	0	1	0	0	0	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
a0001c0001t0025g0060	0/0	1	1	0	0	0	0	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
a0001c0001t0026g0001	0/0	1	0	0	1	0	0	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
a0001c0001t0027g0045	0/0	1	1	0	0	0	0	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
a0001c0001t0028g0001	0/0	1	0	0	1	0	0	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
a0001c0001t0029g0003	0/0	1	0	0	1	0	0	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
a0001c0001t0030g0015	0/0	1	1	0	0	0	0	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
a0001c0001t0031g0029	0/0	1	0	1	0	0	0	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
a0001c0001t0032g0008	0/0	1	1	0	0	0	0	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
a0001c0001t0033g0058	0/0	1	0	0	1	0	0	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
a0001c0001t0037g0034	0/0	1	1	0	0	0	0	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
a0001c0005t0001g0002	0/0	3	0	2	0	1	0	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
a0001c0007t0001g0001	0/0	1	0	0	1	0	0	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
a0002c0002t0002g0005	0/0	20	1	0	15	1	3	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
a0002c0002t0002g0006	0/0	17	0	6	11	0	0	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
a0002c0002t0002g0025	0/0	3	0	0	3	0	0	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
a0002c0002t0002g0031	0/0	2	0	1	1	0	0	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
a0002c0002t0004g0007	0/0	11	11	0	0	0	0	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
a0002c0002t0004g0010	0/0	8	0	2	6	0	0	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
a0002c0002t0004g0061	0/0	1	1	0	0	0	0	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
a0002c0002t0004g0062	0/0	1	0	0	1	0	0	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
a0002c0002t0004g0063	0/0	1	0	0	1	0	0	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
a0002c0002t0004g0064	0/0	1	0	0	1	0	0	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
a0002c0002t0004g0065	0/0	1	1	0	0	0	0	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
a0002c0002t0008g0017	0/0	3	1	2	0	0	0	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
a0002c0002t0008g0018	0/0	3	3	0	0	0	0	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
a0002c0002t0009g0019	0/0	3	3	0	0	0	0	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
a0002c0002t0009g0028	0/0	2	2	0	0	0	0	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
a0002c0002t0009g0030	0/0	1	1	0	0	0	0	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
a0002c0002t0012g0007	0/0	2	2	0	0	0	0	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
a0002c0002t0012g0066	0/0	1	1	0	0	0	0	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
a0002c0002t0015g0023	0/0	3	3	0	0	0	0	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
a0002c0002t0018g0007	0/0	1	1	0	0	0	0	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
a0002c0002t0020g0007	0/0	1	1	0	0	0	0	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
a0002c0002t0021g0010	0/0	1	0	0	1	0	0	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
a0002c0002t0022g0053	0/0	1	0	0	1	0	0	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
a0002c0002t0036g0037	0/0	1	1	0	0	0	0	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
a0002c0002t0038g0068	0/0	1	0	1	0	0	0	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
a0002c0002t0039g0067	0/0	1	1	0	0	0	0	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
a0002c0002t0040g0005	0/0	1	0	0	1	0	0	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
a0002c0002t0041g0005	0/0	1	0	0	1	0	0	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
a0002c0002t0042g0030	0/0	1	0	1	0	0	0	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
a0002c0003t0003g0004	0/0	24	0	2	22	0	0	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
a0002c0003t0003g0014	0/0	3	0	0	3	0	0	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
a0002c0003t0003g0036	0/0	1	0	0	1	0	0	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
a0002c0003t0003g0038	0/0	1	0	0	1	0	0	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
a0002c0003t0017g0004	0/0	2	0	0	1	1	0	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
a0002c0003t0034g0014	0/0	1	0	0	1	0	0	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
a0002c0003t0035g0004	0/0	1	0	0	1	0	0	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
a0002c0004t0006g0009	0/0	9	6	3	0	0	0	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
a0002c0004t0006g0012	0/0	5	3	2	0	0	0	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
a0002c0004t0006g0039	0/0	1	1	0	0	0	0	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
a0002c0004t0006g0040	0/0	1	1	0	0	0	0	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
a0002c0004t0043g0009	0/0	1	0	1	0	0	0	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
a0003c0006t0001g0003	0/0	1	1	0	0	0	0	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
a0004c0008t0008g0032	0/0	1	1	0	0	0	0	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
a0005c0009t0001g0002	0/0	1	0	1	0	0	0	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117

sampleid	ID haplotypeid	ahapid	chapid	thapid	ghapid	gpopname	popname	regionname	genename	chr	start	end
HG00099	hp1	a0002	c0002	t0002	g0005	EUR	GBR	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
HG00099	hp2	a0002	c0003	t0017	g0004	EUR	GBR	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
HG00280	hp1	a0001	c0001	t0001	g0044	EUR	FIN	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
HG00280	hp2	a0001	c0001	t0001	g0001	EUR	FIN	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
HG00323	hp1	a0001	c0001	t0010	g0002	EUR	FIN	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
HG00323	hp2	a0001	c0001	t0010	g0003	EUR	FIN	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
HG00408	hp1	a0001	c0001	t0001	g0022	EAS	CHS	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
HG00408	hp2	a0001	c0001	t0001	g0001	EAS	CHS	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
HG00423	hp1	a0001	c0001	t0011	g0001	EAS	CHS	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
HG00423	hp2	a0001	c0001	t0016	g0001	EAS	CHS	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
HG00438	hp1	a0001	c0001	t0001	g0001	EAS	CHS	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
HG00438	hp2	a0002	c0002	t0002	g0006	EAS	CHS	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
HG00544	hp1	a0001	c0001	t0001	g0002	EAS	CHS	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
HG00544	hp2	a0001	c0001	t0026	g0001	EAS	CHS	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
HG00558	hp1	a0001	c0001	t0001	g0003	EAS	CHS	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
HG00558	hp2	a0001	c0001	t0001	g0002	EAS	CHS	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
HG00609	hp1	a0001	c0001	t0001	g0001	EAS	CHS	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
HG00609	hp2	a0001	c0001	t0001	g0002	EAS	CHS	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
HG00621	hp1	a0001	c0001	t0001	g0003	EAS	CHS	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
HG00621	hp2	a0002	c0002	t0004	g0010	EAS	CHS	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
HG00639	hp1	a0001	c0001	t0001	g0002	AMR	PUR	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
HG00639	hp2	a0001	c0001	t0024	g0003	AMR	PUR	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
HG00642	hp1	a0001	c0001	t0001	g0002	AMR	PUR	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
HG00642	hp2	a0001	c0001	t0001	g0001	AMR	PUR	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
HG00673	hp1	a0001	c0007	t0001	g0001	EAS	CHS	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
HG00673	hp2	a0001	c0001	t0001	g0002	EAS	CHS	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
HG00733	hp1	a0001	c0001	t0001	g0001	AMR	PUR	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
HG00733	hp2	a0001	c0001	t0001	g0003	AMR	PUR	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
HG00735	hp1	a0002	c0004	t0006	g0009	AMR	PUR	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
HG00735	hp2	a0001	c0001	t0005	g0008	AMR	PUR	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
HG00738	hp1	a0001	c0001	t0001	g0001	AMR	PUR	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
HG00738	hp2	a0001	c0001	t0001	g0002	AMR	PUR	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
HG00741	hp1	a0002	c0004	t0043	g0009	AMR	PUR	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
HG00741	hp2	a0005	c0009	t0001	g0002	AMR	PUR	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
HG01069	hp1	a0001	c0001	t0001	g0001	AMR	PUR	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
HG01069	hp2	a0002	c0002	t0004	g0010	AMR	PUR	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
HG01070	hp1	a0001	c0001	t0010	g0002	AMR	PUR	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
HG01070	hp2	a0001	c0001	t0001	g0003	AMR	PUR	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
HG01071	hp1	a0001	c0001	t0001	g0003	AMR	PUR	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
HG01071	hp2	a0002	c0002	t0004	g0010	AMR	PUR	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
HG01074	hp1	a0001	c0001	t0001	g0057	AMR	PUR	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
HG01074	hp2	a0001	c0001	t0001	g0003	AMR	PUR	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
HG01081	hp1	a0001	c0001	t0001	g0002	AMR	PUR	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
HG01081	hp2	a0001	c0001	t0001	g0033	AMR	PUR	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
HG01099	hp1	a0002	c0004	t0006	g0009	AMR	PUR	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
HG01099	hp2	a0001	c0001	t0001	g0001	AMR	PUR	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
HG01106	hp1	a0001	c0001	t0001	g0001	AMR	PUR	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
HG01106	hp2	a0001	c0001	t0001	g0002	AMR	PUR	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
HG01109	hp1	a0001	c0001	t0001	g0002	AMR	PUR	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
HG01109	hp2	a0002	c0004	t0006	g0012	AMR	PUR	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
HG01167	hp1	a0001	c0001	t0001	g0026	AMR	PUR	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
HG01167	hp2	a0001	c0001	t0023	g0029	AMR	PUR	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
HG01168	hp1	a0001	c0001	t0001	g0020	AMR	PUR	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
HG01168	hp2	a0001	c0001	t0001	g0021	AMR	PUR	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
HG01169	hp1	a0001	c0001	t0001	g0021	AMR	PUR	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
HG01169	hp2	a0001	c0001	t0001	g0026	AMR	PUR	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
HG01192	hp1	a0001	c0001	t0001	g0002	AMR	PUR	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
HG01192	hp2	a0001	c0001	t0001	g0003	AMR	PUR	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
HG01243	hp1	a0001	c0001	t0001	g0002	AMR	PUR	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
HG01243	hp2	a0002	c0004	t0006	g0012	AMR	PUR	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
HG01255	hp1	a0001	c0001	t0001	g0002	AMR	CLM	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
HG01255	hp2	a0002	c0002	t0002	g0006	AMR	CLM	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
HG01256	hp1	a0002	c0002	t0008	g0017	AMR	CLM	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
HG01256	hp2	a0001	c0001	t0001	g0001	AMR	CLM	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
HG01257	hp1	a0002	c0002	t0002	g0031	AMR	CLM	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
HG01257	hp2	a0001	c0001	t0001	g0002	AMR	CLM	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
HG01258	hp1	a0001	c0001	t0001	g0002	AMR	CLM	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
HG01258	hp2	a0002	c0002	t0008	g0017	AMR	CLM	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
HG01261	hp1	a0001	c0001	t0001	g0003	AMR	CLM	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
HG01261	hp2	a0001	c0001	t0001	g0002	AMR	CLM	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
HG01346	hp1	a0001	c0001	t0001	g0003	AMR	CLM	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
HG01346	hp2	a0002	c0003	t0003	g0004	AMR	CLM	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
HG01361	hp1	a0001	c0005	t0001	g0002	AMR	CLM	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
HG01361	hp2	a0001	c0001	t0001	g0002	AMR	CLM	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
HG01433	hp1	a0001	c0005	t0001	g0002	AMR	CLM	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
HG01433	hp2	a0001	c0001	t0001	g0002	AMR	CLM	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
HG01496	hp1	a0002	c0004	t0006	g0009	AMR	CLM	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
HG01496	hp2	a0001	c0001	t0001	g0003	AMR	CLM	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
HG01515	hp1	a0001	c0001	t0001	g0001	EUR	IBS	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
HG01515	hp2	a0001	c0001	t0001	g0002	EUR	IBS	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
HG01516	hp1	a0001	c0001	t0001	g0002	EUR	IBS	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
HG01516	hp2	a0001	c0001	t0001	g0001	EUR	IBS	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
HG01884	hp1	a0002	c0002	t0009	g0028	AFR	ACB	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
HG01884	hp2	a0001	c0001	t0030	g0015	AFR	ACB	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
HG01891	hp1	a0001	c0001	t0001	g0001	AFR	ACB	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
HG01891	hp2	a0002	c0002	t0015	g0023	AFR	ACB	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
HG01928	hp1	a0002	c0003	t0003	g0004	AMR	PEL	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
HG01928	hp2	a0001	c0001	t0001	g0003	AMR	PEL	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
HG01934	hp1	a0001	c0001	t0001	g0003	AMR	PEL	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
HG01934	hp2	a0002	c0002	t0002	g0006	AMR	PEL	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
HG01975	hp1	a0001	c0001	t0001	g0003	AMR	PEL	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
HG01975	hp2	a0002	c0002	t0038	g0068	AMR	PEL	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
HG01981	hp1	a0002	c0002	t0042	g0030	AMR	PEL	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
HG01981	hp2	a0002	c0002	t0002	g0006	AMR	PEL	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
HG02004	hp1	a0001	c0001	t0031	g0029	AMR	PEL	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
HG02004	hp2	a0001	c0001	t0001	g0002	AMR	PEL	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
HG02015	hp1	a0002	c0003	t0003	g0004	EAS	KHV	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
HG02015	hp2	a0001	c0001	t0001	g0001	EAS	KHV	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
HG02027	hp1	a0002	c0002	t0002	g0005	EAS	KHV	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
HG02027	hp2	a0001	c0001	t0001	g0001	EAS	KHV	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
HG02040	hp1	a0001	c0001	t0001	g0002	EAS	KHV	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
HG02040	hp2	a0001	c0001	t0001	g0047	EAS	KHV	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
HG02055	hp1	a0002	c0004	t0006	g0040	AFR	ACB	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
HG02055	hp2	a0001	c0001	t0001	g0003	AFR	ACB	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
HG02056	hp1	a0002	c0003	t0003	g0036	EAS	KHV	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
HG02056	hp2	a0002	c0002	t0002	g0005	EAS	KHV	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
HG02071	hp1	a0001	c0001	t0001	g0001	EAS	KHV	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
HG02071	hp2	a0002	c0002	t0002	g0025	EAS	KHV	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
HG02080	hp1	a0001	c0001	t0001	g0022	EAS	KHV	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
HG02080	hp2	a0001	c0001	t0001	g0002	EAS	KHV	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
HG02129	hp1	a0001	c0001	t0001	g0003	EAS	KHV	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
HG02129	hp2	a0002	c0002	t0002	g0025	EAS	KHV	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
HG02132	hp1	a0002	c0003	t0003	g0004	EAS	KHV	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
HG02132	hp2	a0002	c0002	t0004	g0010	EAS	KHV	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
HG02135	hp1	a0001	c0001	t0001	g0001	EAS	KHV	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
HG02135	hp2	a0001	c0001	t0001	g0001	EAS	KHV	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
HG02145	hp1	a0001	c0001	t0005	g0041	AFR	ACB	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
HG02145	hp2	a0001	c0001	t0025	g0060	AFR	ACB	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
HG02148	hp1	a0002	c0002	t0002	g0006	AMR	PEL	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
HG02148	hp2	a0001	c0001	t0001	g0003	AMR	PEL	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
HG02155	hp1	a0001	c0001	t0001	g0046	EAS	CDX	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
HG02155	hp2	a0002	c0002	t0040	g0005	EAS	CDX	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
HG02165	hp1	a0001	c0001	t0001	g0002	EAS	CDX	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
HG02165	hp2	a0001	c0001	t0001	g0001	EAS	CDX	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
HG02257	hp1	a0001	c0001	t0001	g0027	AFR	ACB	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
HG02257	hp2	a0002	c0002	t0004	g0007	AFR	ACB	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
HG02258	hp1	a0001	c0001	t0001	g0003	AFR	ACB	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
HG02258	hp2	a0001	c0001	t0001	g0002	AFR	ACB	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
HG02273	hp1	a0002	c0002	t0002	g0006	AMR	PEL	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
HG02273	hp2	a0001	c0001	t0001	g0003	AMR	PEL	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
HG02280	hp1	a0002	c0002	t0004	g0007	AFR	ACB	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
HG02280	hp2	a0003	c0006	t0001	g0003	AFR	ACB	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
HG02293	hp1	a0002	c0002	t0002	g0006	AMR	PEL	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
HG02293	hp2	a0001	c0001	t0001	g0001	AMR	PEL	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
HG02451	hp1	a0002	c0002	t0009	g0028	AFR	ACB	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
HG02451	hp2	a0002	c0004	t0006	g0009	AFR	ACB	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
HG02572	hp1	a0002	c0002	t0009	g0019	AFR	GWD	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
HG02572	hp2	a0001	c0001	t0001	g0001	AFR	GWD	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
HG02602	hp1	a0001	c0001	t0001	g0001	SAS	PJL	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
HG02602	hp2	a0001	c0001	t0001	g0049	SAS	PJL	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
HG02615	hp1	a0002	c0002	t0009	g0019	AFR	GWD	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
HG02615	hp2	a0002	c0004	t0006	g0009	AFR	GWD	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
HG02622	hp1	a0002	c0004	t0006	g0009	AFR	GWD	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
HG02622	hp2	a0002	c0002	t0009	g0030	AFR	GWD	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
HG02630	hp1	a0002	c0002	t0039	g0067	AFR	GWD	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
HG02630	hp2	a0002	c0002	t0004	g0007	AFR	GWD	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
HG02647	hp1	a0001	c0001	t0007	g0011	AFR	GWD	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
HG02647	hp2	a0001	c0001	t0027	g0045	AFR	GWD	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
HG02683	hp1	a0001	c0001	t0001	g0050	SAS	PJL	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
HG02683	hp2	a0001	c0001	t0001	g0003	SAS	PJL	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
HG02717	hp1	a0002	c0002	t0004	g0007	AFR	GWD	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
HG02717	hp2	a0001	c0001	t0005	g0042	AFR	GWD	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
HG02723	hp1	a0002	c0002	t0012	g0007	AFR	GWD	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
HG02723	hp2	a0002	c0002	t0004	g0061	AFR	GWD	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
HG02735	hp1	a0001	c0001	t0001	g0002	SAS	PJL	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
HG02735	hp2	a0001	c0001	t0001	g0002	SAS	PJL	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
HG02738	hp1	a0001	c0001	t0001	g0001	SAS	PJL	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
HG02738	hp2	a0001	c0001	t0001	g0003	SAS	PJL	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
HG02809	hp1	a0001	c0001	t0001	g0027	AFR	GWD	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
HG02809	hp2	a0001	c0001	t0005	g0008	AFR	GWD	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
HG02818	hp1	a0001	c0001	t0007	g0011	AFR	GWD	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
HG02818	hp2	a0001	c0001	t0005	g0008	AFR	GWD	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
HG02886	hp1	a0002	c0004	t0006	g0012	AFR	GWD	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
HG02886	hp2	a0002	c0002	t0015	g0023	AFR	GWD	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
HG02895	hp1	a0002	c0002	t0004	g0007	AFR	GWD	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
HG02895	hp2	a0001	c0001	t0001	g0001	AFR	GWD	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
HG02896	hp1	a0001	c0001	t0007	g0011	AFR	GWD	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
HG02896	hp2	a0002	c0004	t0006	g0009	AFR	GWD	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
HG02897	hp1	a0002	c0004	t0006	g0039	AFR	GWD	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
HG02897	hp2	a0001	c0001	t0010	g0001	AFR	GWD	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
HG02922	hp1	a0002	c0002	t0008	g0017	AFR	ESN	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
HG02922	hp2	a0001	c0001	t0005	g0043	AFR	ESN	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
HG02965	hp1	a0002	c0002	t0008	g0018	AFR	ESN	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
HG02965	hp2	a0001	c0001	t0007	g0011	AFR	ESN	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
HG02970	hp1	a0002	c0002	t0008	g0018	AFR	ESN	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
HG02970	hp2	a0002	c0002	t0009	g0019	AFR	ESN	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
HG02976	hp1	a0002	c0002	t0036	g0037	AFR	ESN	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
HG02976	hp2	a0001	c0001	t0001	g0003	AFR	ESN	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
HG03017	hp1	a0001	c0001	t0001	g0021	SAS	PJL	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
HG03017	hp2	a0001	c0001	t0001	g0048	SAS	PJL	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
HG03041	hp1	a0001	c0001	t0001	g0015	AFR	GWD	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
HG03041	hp2	a0001	c0001	t0005	g0008	AFR	GWD	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
HG03098	hp1	a0001	c0001	t0005	g0008	AFR	MSL	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
HG03098	hp2	a0001	c0001	t0001	g0001	AFR	MSL	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
HG03130	hp1	a0001	c0001	t0001	g0002	AFR	ESN	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
HG03130	hp2	a0002	c0004	t0006	g0012	AFR	ESN	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
HG03139	hp1	a0001	c0001	t0005	g0008	AFR	ESN	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
HG03139	hp2	a0001	c0001	t0001	g0003	AFR	ESN	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
HG03195	hp1	a0001	c0001	t0001	g0002	AFR	ESN	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
HG03195	hp2	a0002	c0002	t0012	g0066	AFR	ESN	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
HG03209	hp1	a0002	c0004	t0006	g0009	AFR	MSL	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
HG03209	hp2	a0002	c0002	t0004	g0007	AFR	MSL	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
HG03225	hp1	a0004	c0008	t0008	g0032	AFR	MSL	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
HG03225	hp2	a0001	c0001	t0005	g0008	AFR	MSL	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
HG03453	hp1	a0001	c0001	t0005	g0008	AFR	MSL	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
HG03453	hp2	a0002	c0002	t0004	g0007	AFR	MSL	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
HG03486	hp1	a0001	c0001	t0007	g0011	AFR	MSL	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
HG03486	hp2	a0002	c0002	t0008	g0018	AFR	MSL	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
HG03490	hp1	a0001	c0001	t0001	g0020	SAS	PJL	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
HG03490	hp2	a0001	c0001	t0001	g0015	SAS	PJL	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
HG03492	hp1	a0001	c0001	t0001	g0001	SAS	PJL	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
HG03492	hp2	a0001	c0001	t0001	g0002	SAS	PJL	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
HG03516	hp1	a0001	c0001	t0005	g0008	AFR	ESN	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
HG03516	hp2	a0001	c0001	t0005	g0008	AFR	ESN	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
HG03540	hp1	a0002	c0002	t0012	g0007	AFR	GWD	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
HG03540	hp2	a0001	c0001	t0007	g0011	AFR	GWD	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
HG03579	hp1	a0002	c0002	t0018	g0007	AFR	MSL	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
HG03579	hp2	a0002	c0002	t0004	g0007	AFR	MSL	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
HG03688	hp1	a0001	c0001	t0001	g0002	SAS	STU	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
HG03688	hp2	a0001	c0001	t0001	g0001	SAS	STU	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
HG03704	hp1	a0001	c0001	t0001	g0001	SAS	PJL	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
HG03704	hp2	a0001	c0001	t0001	g0002	SAS	PJL	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
HG03710	hp1	a0001	c0001	t0001	g0001	SAS	PJL	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
HG03710	hp2	a0001	c0001	t0001	g0001	SAS	PJL	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
HG03927	hp1	a0001	c0001	t0001	g0001	SAS	BEB	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
HG03927	hp2	a0001	c0001	t0001	g0002	SAS	BEB	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
HG03942	hp1	a0001	c0001	t0001	g0002	SAS	BEB	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
HG03942	hp2	a0001	c0001	t0001	g0051	SAS	BEB	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
HG04115	hp1	a0001	c0001	t0001	g0001	SAS	STU	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
HG04115	hp2	a0002	c0002	t0002	g0005	SAS	STU	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
HG04184	hp1	a0001	c0001	t0001	g0001	SAS	BEB	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
HG04184	hp2	a0001	c0001	t0001	g0002	SAS	BEB	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
HG04199	hp1	a0001	c0001	t0001	g0001	SAS	STU	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
HG04199	hp2	a0001	c0001	t0001	g0002	SAS	STU	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
HG04204	hp1	a0001	c0001	t0001	g0001	SAS	STU	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
HG04204	hp2	a0001	c0001	t0001	g0002	SAS	STU	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
HG04228	hp1	a0002	c0002	t0002	g0005	SAS	STU	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
HG04228	hp2	a0001	c0001	t0001	g0002	SAS	STU	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
NA18522	hp1	a0001	c0001	t0037	g0034	AFR	YRI	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
NA18522	hp2	a0001	c0001	t0001	g0001	AFR	YRI	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
NA18612	hp1	a0001	c0001	t0001	g0001	EAS	CHB	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
NA18612	hp2	a0002	c0002	t0004	g0062	EAS	CHB	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
NA18747	hp1	a0001	c0001	t0001	g0001	EAS	CHB	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
NA18747	hp2	a0001	c0001	t0001	g0002	EAS	CHB	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
NA18906	hp1	a0001	c0001	t0032	g0008	AFR	YRI	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
NA18906	hp2	a0002	c0002	t0004	g0007	AFR	YRI	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
NA18940	hp1	a0002	c0002	t0004	g0010	EAS	JPT	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
NA18940	hp2	a0001	c0001	t0001	g0001	EAS	JPT	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
NA18942	hp1	a0002	c0002	t0002	g0005	EAS	JPT	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
NA18942	hp2	a0001	c0001	t0010	g0015	EAS	JPT	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
NA18943	hp1	a0001	c0001	t0001	g0002	EAS	JPT	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
NA18943	hp2	a0002	c0003	t0003	g0014	EAS	JPT	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
NA18944	hp1	a0001	c0001	t0001	g0003	EAS	JPT	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
NA18944	hp2	a0001	c0001	t0001	g0001	EAS	JPT	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
NA18945	hp1	a0001	c0001	t0001	g0002	EAS	JPT	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
NA18945	hp2	a0002	c0003	t0003	g0014	EAS	JPT	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
NA18946	hp1	a0001	c0001	t0001	g0013	EAS	JPT	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
NA18946	hp2	a0002	c0003	t0003	g0004	EAS	JPT	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
NA18948	hp1	a0001	c0001	t0001	g0016	EAS	JPT	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
NA18948	hp2	a0001	c0001	t0001	g0002	EAS	JPT	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
NA18950	hp1	a0001	c0001	t0001	g0003	EAS	JPT	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
NA18950	hp2	a0001	c0001	t0001	g0001	EAS	JPT	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
NA18951	hp1	a0001	c0001	t0001	g0001	EAS	JPT	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
NA18951	hp2	a0002	c0003	t0034	g0014	EAS	JPT	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
NA18952	hp1	a0002	c0002	t0002	g0005	EAS	JPT	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
NA18952	hp2	a0002	c0003	t0003	g0004	EAS	JPT	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
NA18954	hp1	a0001	c0001	t0016	g0020	EAS	JPT	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
NA18954	hp2	a0002	c0002	t0002	g0006	EAS	JPT	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
NA18956	hp1	a0001	c0001	t0001	g0002	EAS	JPT	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
NA18956	hp2	a0002	c0003	t0003	g0004	EAS	JPT	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
NA18957	hp1	a0002	c0002	t0002	g0005	EAS	JPT	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
NA18957	hp2	a0001	c0001	t0001	g0002	EAS	JPT	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
NA18959	hp1	a0001	c0001	t0001	g0002	EAS	JPT	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
NA18959	hp2	a0001	c0001	t0001	g0003	EAS	JPT	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
NA18960	hp1	a0001	c0001	t0001	g0001	EAS	JPT	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
NA18960	hp2	a0002	c0002	t0002	g0005	EAS	JPT	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
NA18961	hp1	a0001	c0001	t0001	g0002	EAS	JPT	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
NA18961	hp2	a0002	c0002	t0002	g0005	EAS	JPT	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
NA18962	hp1	a0001	c0001	t0001	g0002	EAS	JPT	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
NA18962	hp2	a0001	c0001	t0001	g0001	EAS	JPT	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
NA18964	hp1	a0002	c0002	t0002	g0006	EAS	JPT	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
NA18964	hp2	a0001	c0001	t0001	g0022	EAS	JPT	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
NA18965	hp1	a0001	c0001	t0001	g0055	EAS	JPT	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
NA18965	hp2	a0001	c0001	t0001	g0001	EAS	JPT	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
NA18966	hp1	a0002	c0003	t0003	g0004	EAS	JPT	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
NA18966	hp2	a0001	c0001	t0001	g0002	EAS	JPT	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
NA18967	hp1	a0001	c0001	t0014	g0024	EAS	JPT	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
NA18967	hp2	a0002	c0002	t0002	g0005	EAS	JPT	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
NA18968	hp1	a0001	c0001	t0001	g0001	EAS	JPT	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
NA18968	hp2	a0001	c0001	t0001	g0002	EAS	JPT	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
NA18969	hp1	a0001	c0001	t0001	g0001	EAS	JPT	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
NA18969	hp2	a0002	c0002	t0041	g0005	EAS	JPT	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
NA18970	hp1	a0001	c0001	t0001	g0059	EAS	JPT	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
NA18970	hp2	a0001	c0001	t0014	g0024	EAS	JPT	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
NA18971	hp1	a0001	c0001	t0001	g0003	EAS	JPT	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
NA18971	hp2	a0002	c0002	t0002	g0006	EAS	JPT	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
NA18972	hp1	a0002	c0003	t0003	g0014	EAS	JPT	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
NA18972	hp2	a0001	c0001	t0001	g0013	EAS	JPT	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
NA18974	hp1	a0001	c0001	t0019	g0002	EAS	JPT	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
NA18974	hp2	a0002	c0002	t0002	g0006	EAS	JPT	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
NA18977	hp1	a0001	c0001	t0001	g0001	EAS	JPT	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
NA18977	hp2	a0002	c0003	t0003	g0004	EAS	JPT	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
NA18978	hp1	a0002	c0003	t0003	g0004	EAS	JPT	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
NA18978	hp2	a0001	c0001	t0011	g0001	EAS	JPT	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
NA18979	hp1	a0001	c0001	t0001	g0002	EAS	JPT	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
NA18979	hp2	a0001	c0001	t0001	g0001	EAS	JPT	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
NA18980	hp1	a0001	c0001	t0001	g0002	EAS	JPT	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
NA18980	hp2	a0001	c0001	t0001	g0013	EAS	JPT	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
NA18981	hp1	a0001	c0001	t0011	g0001	EAS	JPT	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
NA18981	hp2	a0002	c0003	t0003	g0004	EAS	JPT	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
NA18982	hp1	a0002	c0002	t0002	g0005	EAS	JPT	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
NA18982	hp2	a0002	c0003	t0003	g0004	EAS	JPT	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
NA18983	hp1	a0002	c0003	t0003	g0004	EAS	JPT	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
NA18983	hp2	a0002	c0002	t0002	g0005	EAS	JPT	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
NA18984	hp1	a0001	c0001	t0001	g0056	EAS	JPT	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
NA18984	hp2	a0001	c0001	t0001	g0001	EAS	JPT	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
NA18985	hp1	a0001	c0001	t0001	g0001	EAS	JPT	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
NA18985	hp2	a0001	c0001	t0001	g0002	EAS	JPT	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
NA18987	hp1	a0002	c0003	t0003	g0004	EAS	JPT	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
NA18987	hp2	a0001	c0001	t0001	g0002	EAS	JPT	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
NA18988	hp1	a0001	c0001	t0001	g0002	EAS	JPT	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
NA18988	hp2	a0001	c0001	t0001	g0001	EAS	JPT	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
NA18989	hp1	a0002	c0003	t0003	g0004	EAS	JPT	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
NA18989	hp2	a0001	c0001	t0001	g0002	EAS	JPT	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
NA18990	hp1	a0001	c0001	t0001	g0001	EAS	JPT	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
NA18990	hp2	a0002	c0002	t0002	g0006	EAS	JPT	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
NA18991	hp1	a0001	c0001	t0028	g0001	EAS	JPT	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
NA18991	hp2	a0001	c0001	t0001	g0001	EAS	JPT	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
NA18993	hp1	a0001	c0001	t0033	g0058	EAS	JPT	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
NA18993	hp2	a0001	c0001	t0001	g0001	EAS	JPT	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
NA18994	hp1	a0001	c0001	t0011	g0001	EAS	JPT	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
NA18994	hp2	a0001	c0001	t0001	g0003	EAS	JPT	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
NA18995	hp1	a0002	c0002	t0004	g0010	EAS	JPT	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
NA18995	hp2	a0002	c0003	t0003	g0004	EAS	JPT	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
NA18997	hp1	a0002	c0003	t0003	g0004	EAS	JPT	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
NA18997	hp2	a0002	c0002	t0002	g0031	EAS	JPT	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
NA18998	hp1	a0002	c0003	t0003	g0004	EAS	JPT	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
NA18998	hp2	a0002	c0002	t0002	g0006	EAS	JPT	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
NA18999	hp1	a0002	c0002	t0002	g0006	EAS	JPT	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
NA18999	hp2	a0001	c0001	t0001	g0001	EAS	JPT	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
NA19000	hp1	a0001	c0001	t0001	g0001	EAS	JPT	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
NA19000	hp2	a0001	c0001	t0001	g0002	EAS	JPT	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
NA19001	hp1	a0001	c0001	t0001	g0002	EAS	JPT	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
NA19001	hp2	a0001	c0001	t0001	g0001	EAS	JPT	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
NA19002	hp1	a0001	c0001	t0001	g0002	EAS	JPT	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
NA19002	hp2	a0002	c0003	t0003	g0004	EAS	JPT	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
NA19003	hp1	a0001	c0001	t0001	g0001	EAS	JPT	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
NA19003	hp2	a0001	c0001	t0001	g0003	EAS	JPT	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
NA19005	hp1	a0001	c0001	t0001	g0013	EAS	JPT	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
NA19005	hp2	a0002	c0002	t0004	g0064	EAS	JPT	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
NA19006	hp1	a0001	c0001	t0014	g0024	EAS	JPT	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
NA19006	hp2	a0002	c0002	t0002	g0005	EAS	JPT	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
NA19007	hp1	a0001	c0001	t0001	g0001	EAS	JPT	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
NA19007	hp2	a0002	c0002	t0002	g0006	EAS	JPT	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
NA19010	hp1	a0002	c0003	t0003	g0004	EAS	JPT	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
NA19010	hp2	a0001	c0001	t0001	g0001	EAS	JPT	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
NA19011	hp1	a0001	c0001	t0001	g0013	EAS	JPT	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
NA19011	hp2	a0001	c0001	t0001	g0002	EAS	JPT	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
NA19030	hp1	a0001	c0001	t0001	g0035	AFR	LWK	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
NA19030	hp2	a0001	c0001	t0001	g0002	AFR	LWK	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
NA19056	hp1	a0002	c0003	t0003	g0038	EAS	JPT	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
NA19056	hp2	a0001	c0001	t0001	g0002	EAS	JPT	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
NA19057	hp1	a0001	c0001	t0001	g0002	EAS	JPT	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
NA19057	hp2	a0001	c0001	t0001	g0001	EAS	JPT	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
NA19058	hp1	a0002	c0003	t0017	g0004	EAS	JPT	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
NA19058	hp2	a0001	c0001	t0001	g0002	EAS	JPT	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
NA19059	hp1	a0002	c0002	t0004	g0063	EAS	JPT	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
NA19059	hp2	a0002	c0003	t0003	g0004	EAS	JPT	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
NA19060	hp1	a0001	c0001	t0013	g0001	EAS	JPT	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
NA19060	hp2	a0002	c0003	t0003	g0004	EAS	JPT	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
NA19062	hp1	a0001	c0001	t0001	g0016	EAS	JPT	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
NA19062	hp2	a0001	c0001	t0001	g0002	EAS	JPT	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
NA19064	hp1	a0001	c0001	t0029	g0003	EAS	JPT	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
NA19064	hp2	a0001	c0001	t0001	g0001	EAS	JPT	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
NA19065	hp1	a0001	c0001	t0001	g0001	EAS	JPT	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
NA19065	hp2	a0001	c0001	t0001	g0052	EAS	JPT	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
NA19066	hp1	a0002	c0002	t0002	g0005	EAS	JPT	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
NA19066	hp2	a0001	c0001	t0001	g0001	EAS	JPT	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
NA19067	hp1	a0001	c0001	t0001	g0002	EAS	JPT	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
NA19067	hp2	a0001	c0001	t0001	g0001	EAS	JPT	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
NA19068	hp1	a0001	c0001	t0001	g0002	EAS	JPT	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
NA19068	hp2	a0002	c0002	t0004	g0010	EAS	JPT	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
NA19072	hp1	a0001	c0001	t0013	g0001	EAS	JPT	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
NA19072	hp2	a0002	c0002	t0002	g0025	EAS	JPT	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
NA19074	hp1	a0001	c0001	t0001	g0003	EAS	JPT	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
NA19074	hp2	a0001	c0001	t0001	g0001	EAS	JPT	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
NA19075	hp1	a0002	c0003	t0035	g0004	EAS	JPT	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
NA19075	hp2	a0001	c0001	t0013	g0001	EAS	JPT	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
NA19076	hp1	a0001	c0001	t0001	g0001	EAS	JPT	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
NA19076	hp2	a0001	c0001	t0001	g0001	EAS	JPT	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
NA19077	hp1	a0002	c0002	t0002	g0006	EAS	JPT	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
NA19077	hp2	a0001	c0001	t0001	g0001	EAS	JPT	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
NA19079	hp1	a0002	c0003	t0003	g0004	EAS	JPT	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
NA19079	hp2	a0001	c0001	t0001	g0001	EAS	JPT	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
NA19080	hp1	a0001	c0001	t0001	g0001	EAS	JPT	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
NA19080	hp2	a0001	c0001	t0001	g0002	EAS	JPT	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
NA19081	hp1	a0001	c0001	t0001	g0002	EAS	JPT	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
NA19081	hp2	a0002	c0003	t0003	g0004	EAS	JPT	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
NA19083	hp1	a0002	c0002	t0002	g0006	EAS	JPT	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
NA19083	hp2	a0002	c0002	t0022	g0053	EAS	JPT	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
NA19084	hp1	a0001	c0001	t0001	g0002	EAS	JPT	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
NA19084	hp2	a0002	c0002	t0002	g0005	EAS	JPT	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
NA19086	hp1	a0001	c0001	t0001	g0001	EAS	JPT	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
NA19086	hp2	a0001	c0001	t0001	g0016	EAS	JPT	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
NA19088	hp1	a0001	c0001	t0001	g0002	EAS	JPT	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
NA19088	hp2	a0002	c0002	t0002	g0005	EAS	JPT	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
NA19089	hp1	a0002	c0002	t0002	g0005	EAS	JPT	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
NA19089	hp2	a0002	c0002	t0021	g0010	EAS	JPT	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
NA19090	hp1	a0002	c0002	t0004	g0010	EAS	JPT	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
NA19090	hp2	a0001	c0001	t0001	g0001	EAS	JPT	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
NA19091	hp1	a0001	c0001	t0001	g0002	EAS	JPT	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
NA19091	hp2	a0001	c0001	t0001	g0016	EAS	JPT	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
NA19240	hp1	a0002	c0002	t0004	g0065	AFR	YRI	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
NA19240	hp2	a0002	c0002	t0015	g0023	AFR	YRI	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
NA20129	hp1	a0001	c0001	t0001	g0001	AFR	ASW	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
NA20129	hp2	a0002	c0002	t0020	g0007	AFR	ASW	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
NA20752	hp1	a0001	c0005	t0001	g0002	EUR	TSI	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
NA20752	hp2	a0001	c0001	t0001	g0002	EUR	TSI	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
NA20805	hp1	a0001	c0001	t0001	g0002	EUR	TSI	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
NA20805	hp2	a0001	c0001	t0001	g0002	EUR	TSI	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
NA20905	hp1	a0001	c0001	t0001	g0002	SAS	GIH	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
NA20905	hp2	a0002	c0002	t0002	g0005	SAS	GIH	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
HG01123	hp1	a0001	c0001	t0001	g0003	AMR	CLM	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
HG01123	hp2	a0001	c0001	t0001	g0002	AMR	CLM	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
HG02109	hp1	a0001	c0001	t0005	g0008	AFR	ACB	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
HG02109	hp2	a0001	c0001	t0001	g0001	AFR	ACB	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
HG02486	hp1	a0002	c0004	t0006	g0009	AFR	ACB	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
HG02486	hp2	a0002	c0002	t0004	g0007	AFR	ACB	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
HG02559	hp1	a0001	c0001	t0001	g0003	AFR	ACB	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
HG02559	hp2	a0001	c0001	t0007	g0011	AFR	ACB	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
HG03471	hp1	a0001	c0001	t0007	g0011	AFR	MSL	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
HG03471	hp2	a0001	c0001	t0005	g0008	AFR	MSL	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
HG06807	hp1	a0002	c0002	t0004	g0007	AFR	USA	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
HG06807	hp2	a0002	c0004	t0006	g0012	AFR	USA	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
NA18955	hp1	a0001	c0001	t0001	g0002	EAS	JPT	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
NA18955	hp2	a0001	c0001	t0001	g0001	EAS	JPT	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
NA21309	hp1	a0002	c0002	t0002	g0005	AFR	LWK	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
NA21309	hp2	a0001	c0001	t0005	g0008	AFR	LWK	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
homoSapiens_chm13v2	hp1	a0001	c0001	t0001	g0002	REF	REF	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117
homoSapiens_grch38	hp1	a0001	c0001	t0001	g0054	REF	REF	CLN5_chr13_76987081_77010117	CLN5	chr13	76987081	77010117

chr:pos	ref	alt	# # of ahapid:amino-acid(protein) level	ahapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	hgvs_p	genename	geneid	featuretype	featureid	transcript_biotype	rank	cdna cdna pos length	cds cds pos length	aa aa pos length	chr	pos
chr13:77000471	C C	A A	1	a0003 a0003	1	HG02280.hp2 HG02280.hp2	missense_variant	MODERATE	c.579C>A c.579C>A	p.Asn193Lys p.Asn193Lys	CLN5	ENSG00000102805.16	transcript	ENST00000377453.9	protein_coding	4/4	597/5243	579/1077	193/358	chr13	77000471
chr13:77000704	A A	G G	1	a0005 a0005	1	HG00741.hp2 HG00741.hp2	missense_variant	MODERATE	c.812A>G c.812A>G	p.Asn271Ser p.Asn271Ser	CLN5	ENSG00000102805.16	transcript	ENST00000377453.9	protein_coding	4/4	830/5243	812/1077	271/358	chr13	77000704
chr13:77000784	C C	T T	1	a0004 a0004	1	HG03225.hp1 HG03225.hp1	missense_variant	MODERATE	c.892C>T c.892C>T	p.His298Tyr p.His298Tyr	CLN5	ENSG00000102805.16	transcript	ENST00000377453.9	protein_coding	4/4	910/5243	892/1077	298/358	chr13	77000784
chr13:77000848	A A	G G	2	a0002 a0004 a0002 a0004	145	HG00099.hp1 HG00099.hp2 HG00438.hp2 others(142): Show HG00099.hp1 HG00099.hp2 HG00438.hp2 HG00621.hp2 HG00735.hp1 HG00741.hp1 HG01069.hp2 HG01071.hp2 HG01099.hp1 HG01109.hp2 HG01243.hp2 HG01255.hp2 HG01256.hp1 HG01257.hp1 HG01258.hp2 HG01346.hp2 HG01496.hp1 HG01884.hp1 HG01891.hp2 HG01928.hp1 HG01934.hp2 HG01975.hp2 HG01981.hp1 HG01981.hp2 HG02015.hp1 HG02027.hp1 HG02055.hp1 HG02056.hp1 HG02056.hp2 HG02071.hp2 HG02129.hp2 HG02132.hp1 HG02132.hp2 HG02148.hp1 HG02155.hp2 HG02257.hp2 HG02273.hp1 HG02280.hp1 HG02293.hp1 HG02451.hp1 HG02451.hp2 HG02486.hp1 HG02486.hp2 HG02572.hp1 HG02615.hp1 HG02615.hp2 HG02622.hp1 HG02622.hp2 HG02630.hp1 HG02630.hp2 HG02717.hp1 HG02723.hp1 HG02723.hp2 HG02886.hp1 HG02886.hp2 HG02895.hp1 HG02896.hp2 HG02897.hp1 HG02922.hp1 HG02965.hp1 HG02970.hp1 HG02970.hp2 HG02976.hp1 HG03130.hp2 HG03195.hp2 HG03209.hp1 HG03209.hp2 HG03225.hp1 HG03453.hp2 HG03486.hp2 HG03540.hp1 HG03579.hp1 HG03579.hp2 HG04115.hp2 HG04228.hp1 HG06807.hp1 HG06807.hp2 NA18612.hp2 NA18906.hp2 NA18940.hp1 NA18942.hp1 NA18943.hp2 NA18945.hp2 NA18946.hp2 NA18951.hp2 NA18952.hp1 NA18952.hp2 NA18954.hp2 NA18956.hp2 NA18957.hp1 NA18960.hp2 NA18961.hp2 NA18964.hp1 NA18966.hp1 NA18967.hp2 NA18969.hp2 NA18971.hp2 NA18972.hp1 NA18974.hp2 NA18977.hp2 NA18978.hp1 NA18981.hp2 NA18982.hp1 NA18982.hp2 NA18983.hp1 NA18983.hp2 NA18987.hp1 NA18989.hp1 NA18990.hp2 NA18995.hp1 NA18995.hp2 NA18997.hp1 NA18997.hp2 NA18998.hp1 NA18998.hp2 NA18999.hp1 NA19002.hp2 NA19005.hp2 NA19006.hp2 NA19007.hp2 NA19010.hp1 NA19056.hp1 NA19058.hp1 NA19059.hp1 NA19059.hp2 NA19060.hp2 NA19066.hp1 NA19068.hp2 NA19072.hp2 NA19075.hp1 NA19077.hp1 NA19079.hp1 NA19081.hp2 NA19083.hp1 NA19083.hp2 NA19084.hp2 NA19088.hp2 NA19089.hp1 NA19089.hp2 NA19090.hp1 NA19240.hp1 NA19240.hp2 NA20129.hp2 NA20905.hp2 NA21309.hp1	missense_variant	MODERATE	c.956A>G c.956A>G	p.Lys319Arg p.Lys319Arg	CLN5	ENSG00000102805.16	transcript	ENST00000377453.9	protein_coding	4/4	974/5243	956/1077	319/358	chr13	77000848

chr:pos	ref	alt	# # of chapid	chapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	hgvs_p	genename	geneid	featuretype	featureid	transcript_biotype	rank	cdna cdna pos length	cds cds pos length	aa aa pos length	chr	pos
chr13:76992185	C C	G G	2	a0001c0005 a0005c0009 a0001c0005 a0005c0009	4	HG00741.hp2 HG01361.hp1 HG01433.hp1 others(1): Show HG00741.hp2 HG01361.hp1 HG01433.hp1 NA20752.hp1	synonymous_variant	LOW	c.87C>G c.87C>G	p.Ala29Ala p.Ala29Ala	CLN5	ENSG00000102805.16	transcript	ENST00000377453.9	protein_coding	1/4	105/5243	87/1077	29/358	chr13	76992185
chr13:76995943	T T	G G	1	a0002c0003 a0002c0003	33	HG00099.hp2 HG01346.hp2 HG01928.hp1 others(30): Show HG00099.hp2 HG01346.hp2 HG01928.hp1 HG02015.hp1 HG02056.hp1 HG02132.hp1 NA18943.hp2 NA18945.hp2 NA18946.hp2 NA18951.hp2 NA18952.hp2 NA18956.hp2 NA18966.hp1 NA18972.hp1 NA18977.hp2 NA18978.hp1 NA18981.hp2 NA18982.hp2 NA18983.hp1 NA18987.hp1 NA18989.hp1 NA18995.hp2 NA18997.hp1 NA18998.hp1 NA19002.hp2 NA19010.hp1 NA19056.hp1 NA19058.hp1 NA19059.hp2 NA19060.hp2 NA19075.hp1 NA19079.hp1 NA19081.hp2	synonymous_variant	LOW	c.381T>G c.381T>G	p.Thr127Thr p.Thr127Thr	CLN5	ENSG00000102805.16	transcript	ENST00000377453.9	protein_coding	3/4	399/5243	381/1077	127/358	chr13	76995943
chr13:77000918	A A	G G	1	a0001c0007 a0001c0007	1	HG00673.hp1 HG00673.hp1	synonymous_variant	LOW	c.1026A>G c.1026A>G	p.Thr342Thr p.Thr342Thr	CLN5	ENSG00000102805.16	transcript	ENST00000377453.9	protein_coding	4/4	1044/5243	1026/1077	342/358	chr13	77000918
chr13:77000933	T T	C C	1	a0002c0004 a0002c0004	17	HG00735.hp1 HG00741.hp1 HG01099.hp1 others(14): Show HG00735.hp1 HG00741.hp1 HG01099.hp1 HG01109.hp2 HG01243.hp2 HG01496.hp1 HG02055.hp1 HG02451.hp2 HG02486.hp1 HG02615.hp2 HG02622.hp1 HG02886.hp1 HG02896.hp2 HG02897.hp1 HG03130.hp2 HG03209.hp1 HG06807.hp2	synonymous_variant	LOW	c.1041T>C c.1041T>C	p.Pro347Pro p.Pro347Pro	CLN5	ENSG00000102805.16	transcript	ENST00000377453.9	protein_coding	4/4	1059/5243	1041/1077	347/358	chr13	77000933

chr:pos	ref	alt	# # of thapid:transcript level	thapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	pos
chr13:77001002	A A	G G	9	a0002c0002t0002 a0002c0002t0009 a0002c0002t0038 others(6): Show a0002c0002t0002 a0002c0002t0009 a0002c0002t0038 a0002c0002t0039 a0002c0002t0040 a0002c0002t0041 a0002c0002t0042 a0002c0004t0006 a0002c0004t0043	70	HG00099.hp1 HG00438.hp2 HG00735.hp1 others(67): Show HG00099.hp1 HG00438.hp2 HG00735.hp1 HG00741.hp1 HG01099.hp1 HG01109.hp2 HG01243.hp2 HG01255.hp2 HG01257.hp1 HG01496.hp1 HG01884.hp1 HG01934.hp2 HG01975.hp2 HG01981.hp1 HG01981.hp2 HG02027.hp1 HG02055.hp1 HG02056.hp2 HG02071.hp2 HG02129.hp2 HG02148.hp1 HG02155.hp2 HG02273.hp1 HG02293.hp1 HG02451.hp1 HG02451.hp2 HG02486.hp1 HG02572.hp1 HG02615.hp1 HG02615.hp2 HG02622.hp1 HG02622.hp2 HG02630.hp1 HG02886.hp1 HG02896.hp2 HG02897.hp1 HG02970.hp2 HG03130.hp2 HG03209.hp1 HG04115.hp2 HG04228.hp1 HG06807.hp2 NA18942.hp1 NA18952.hp1 NA18954.hp2 NA18957.hp1 NA18960.hp2 NA18961.hp2 NA18964.hp1 NA18967.hp2 NA18969.hp2 NA18971.hp2 NA18974.hp2 NA18982.hp1 NA18983.hp2 NA18990.hp2 NA18997.hp2 NA18998.hp2 NA18999.hp1 NA19006.hp2 NA19007.hp2 NA19066.hp1 NA19072.hp2 NA19077.hp1 NA19083.hp1 NA19084.hp2 NA19088.hp2 NA19089.hp1 NA20905.hp2 NA21309.hp1	3_prime_UTR_variant	MODIFIER	c.33A>G c.33A>G	CLN5	ENSG00000102805.16	transcript	ENST00000377453.9	protein_coding	4/4	33		chr13	77001002
chr13:77001124	C C	T T	11	a0001c0001t0037 a0002c0002t0008 a0002c0002t0015 others(8): Show a0001c0001t0037 a0002c0002t0008 a0002c0002t0015 a0002c0002t0036 a0002c0003t0003 a0002c0003t0017 a0002c0003t0034 a0002c0003t0035 a0002c0004t0006 a0002c0004t0043 a0004c0008t0008	62	HG00099.hp2 HG00735.hp1 HG00741.hp1 others(59): Show HG00099.hp2 HG00735.hp1 HG00741.hp1 HG01099.hp1 HG01109.hp2 HG01243.hp2 HG01256.hp1 HG01258.hp2 HG01346.hp2 HG01496.hp1 HG01891.hp2 HG01928.hp1 HG02015.hp1 HG02055.hp1 HG02056.hp1 HG02132.hp1 HG02451.hp2 HG02486.hp1 HG02615.hp2 HG02622.hp1 HG02886.hp1 HG02886.hp2 HG02896.hp2 HG02897.hp1 HG02922.hp1 HG02965.hp1 HG02970.hp1 HG02976.hp1 HG03130.hp2 HG03209.hp1 HG03225.hp1 HG03486.hp2 HG06807.hp2 NA18522.hp1 NA18943.hp2 NA18945.hp2 NA18946.hp2 NA18951.hp2 NA18952.hp2 NA18956.hp2 NA18966.hp1 NA18972.hp1 NA18977.hp2 NA18978.hp1 NA18981.hp2 NA18982.hp2 NA18983.hp1 NA18987.hp1 NA18989.hp1 NA18995.hp2 NA18997.hp1 NA18998.hp1 NA19002.hp2 NA19010.hp1 NA19056.hp1 NA19058.hp1 NA19059.hp2 NA19060.hp2 NA19075.hp1 NA19079.hp1 NA19081.hp2 NA19240.hp2	3_prime_UTR_variant	MODIFIER	c.155C>T c.155C>T	CLN5	ENSG00000102805.16	transcript	ENST00000377453.9	protein_coding	4/4	155		chr13	77001124
chr13:77001127	C C	G G	2	a0002c0002t0008 a0004c0008t0008 a0002c0002t0008 a0004c0008t0008	7	HG01256.hp1 HG01258.hp2 HG02922.hp1 others(4): Show HG01256.hp1 HG01258.hp2 HG02922.hp1 HG02965.hp1 HG02970.hp1 HG03225.hp1 HG03486.hp2	3_prime_UTR_variant	MODIFIER	c.158C>G c.158C>G	CLN5	ENSG00000102805.16	transcript	ENST00000377453.9	protein_coding	4/4	158		chr13	77001127
chr13:77001149	C C	T T	1	a0001c0001t0037 a0001c0001t0037	1	NA18522.hp1 NA18522.hp1	3_prime_UTR_variant	MODIFIER	c.180C>T c.180C>T	CLN5	ENSG00000102805.16	transcript	ENST00000377453.9	protein_coding	4/4	180		chr13	77001149
chr13:77001238	G G	A A	1	a0002c0002t0018 a0002c0002t0018	1	HG03579.hp1 HG03579.hp1	3_prime_UTR_variant	MODIFIER	c.269G>A c.269G>A	CLN5	ENSG00000102805.16	transcript	ENST00000377453.9	protein_coding	4/4	269		chr13	77001238
chr13:77001247	G G	A A	1	a0001c0001t0019 a0001c0001t0019	1	NA18974.hp1 NA18974.hp1	3_prime_UTR_variant	MODIFIER	c.278G>A c.278G>A	CLN5	ENSG00000102805.16	transcript	ENST00000377453.9	protein_coding	4/4	278		chr13	77001247
chr13:77001261	G G	A A	18	a0001c0001t0037 a0002c0002t0002 a0002c0002t0004 others(15): Show a0001c0001t0037 a0002c0002t0002 a0002c0002t0004 a0002c0002t0008 a0002c0002t0012 a0002c0002t0018 a0002c0002t0020 a0002c0002t0021 a0002c0002t0022 a0002c0002t0038 a0002c0002t0039 a0002c0002t0040 a0002c0002t0041 a0002c0003t0003 a0002c0003t0017 a0002c0003t0034 a0002c0003t0035 a0004c0008t0008	118	HG00099.hp1 HG00099.hp2 HG00438.hp2 others(115): Show HG00099.hp1 HG00099.hp2 HG00438.hp2 HG00621.hp2 HG01069.hp2 HG01071.hp2 HG01255.hp2 HG01256.hp1 HG01257.hp1 HG01258.hp2 HG01346.hp2 HG01928.hp1 HG01934.hp2 HG01975.hp2 HG01981.hp2 HG02015.hp1 HG02027.hp1 HG02056.hp1 HG02056.hp2 HG02071.hp2 HG02129.hp2 HG02132.hp1 HG02132.hp2 HG02148.hp1 HG02155.hp2 HG02257.hp2 HG02273.hp1 HG02280.hp1 HG02293.hp1 HG02486.hp2 HG02630.hp1 HG02630.hp2 HG02717.hp1 HG02723.hp1 HG02723.hp2 HG02895.hp1 HG02922.hp1 HG02965.hp1 HG02970.hp1 HG03195.hp2 HG03209.hp2 HG03225.hp1 HG03453.hp2 HG03486.hp2 HG03540.hp1 HG03579.hp1 HG03579.hp2 HG04115.hp2 HG04228.hp1 HG06807.hp1 NA18522.hp1 NA18612.hp2 NA18906.hp2 NA18940.hp1 NA18942.hp1 NA18943.hp2 NA18945.hp2 NA18946.hp2 NA18951.hp2 NA18952.hp1 NA18952.hp2 NA18954.hp2 NA18956.hp2 NA18957.hp1 NA18960.hp2 NA18961.hp2 NA18964.hp1 NA18966.hp1 NA18967.hp2 NA18969.hp2 NA18971.hp2 NA18972.hp1 NA18974.hp2 NA18977.hp2 NA18978.hp1 NA18981.hp2 NA18982.hp1 NA18982.hp2 NA18983.hp1 NA18983.hp2 NA18987.hp1 NA18989.hp1 NA18990.hp2 NA18995.hp1 NA18995.hp2 NA18997.hp1 NA18997.hp2 NA18998.hp1 NA18998.hp2 NA18999.hp1 NA19002.hp2 NA19005.hp2 NA19006.hp2 NA19007.hp2 NA19010.hp1 NA19056.hp1 NA19058.hp1 NA19059.hp1 NA19059.hp2 NA19060.hp2 NA19066.hp1 NA19068.hp2 NA19072.hp2 NA19075.hp1 NA19077.hp1 NA19079.hp1 NA19081.hp2 NA19083.hp1 NA19083.hp2 NA19084.hp2 NA19088.hp2 NA19089.hp1 NA19089.hp2 NA19090.hp1 NA19240.hp1 NA20129.hp2 NA20905.hp2 NA21309.hp1	3_prime_UTR_variant	MODIFIER	c.292G>A c.292G>A	CLN5	ENSG00000102805.16	transcript	ENST00000377453.9	protein_coding	4/4	292		chr13	77001261
chr13:77001414	A A	C C	1	a0001c0001t0033 a0001c0001t0033	1	NA18993.hp1 NA18993.hp1	3_prime_UTR_variant	MODIFIER	c.445A>C c.445A>C	CLN5	ENSG00000102805.16	transcript	ENST00000377453.9	protein_coding	4/4	445		chr13	77001414
chr13:77001568	C C	T T	1	a0001c0001t0032 a0001c0001t0032	1	NA18906.hp1 NA18906.hp1	3_prime_UTR_variant	MODIFIER	c.599C>T c.599C>T	CLN5	ENSG00000102805.16	transcript	ENST00000377453.9	protein_coding	4/4	599		chr13	77001568
chr13:77001873	CTTCA CTTCA	C C	1	a0001c0001t0014 a0001c0001t0014	3	NA18967.hp1 NA18970.hp2 NA19006.hp1 NA18967.hp1 NA18970.hp2 NA19006.hp1	3_prime_UTR_variant	MODIFIER	c.907_910delCATT c.907_910delCATT	CLN5	ENSG00000102805.16	transcript	ENST00000377453.9	protein_coding	4/4	907	INFO_REALIGN_3_PRIME	chr13	77001873
chr13:77002101	A A	G G	5	a0002c0002t0022 a0002c0003t0003 a0002c0003t0017 others(2): Show a0002c0002t0022 a0002c0003t0003 a0002c0003t0017 a0002c0003t0034 a0002c0003t0035	34	HG00099.hp2 HG01346.hp2 HG01928.hp1 others(31): Show HG00099.hp2 HG01346.hp2 HG01928.hp1 HG02015.hp1 HG02056.hp1 HG02132.hp1 NA18943.hp2 NA18945.hp2 NA18946.hp2 NA18951.hp2 NA18952.hp2 NA18956.hp2 NA18966.hp1 NA18972.hp1 NA18977.hp2 NA18978.hp1 NA18981.hp2 NA18982.hp2 NA18983.hp1 NA18987.hp1 NA18989.hp1 NA18995.hp2 NA18997.hp1 NA18998.hp1 NA19002.hp2 NA19010.hp1 NA19056.hp1 NA19058.hp1 NA19059.hp2 NA19060.hp2 NA19075.hp1 NA19079.hp1 NA19081.hp2 NA19083.hp2	3_prime_UTR_variant	MODIFIER	c.1132A>G c.1132A>G	CLN5	ENSG00000102805.16	transcript	ENST00000377453.9	protein_coding	4/4	1132		chr13	77002101
chr13:77002128	G G	A A	2	a0002c0002t0012 a0002c0002t0020 a0002c0002t0012 a0002c0002t0020	4	HG02723.hp1 HG03195.hp2 HG03540.hp1 others(1): Show HG02723.hp1 HG03195.hp2 HG03540.hp1 NA20129.hp2	3_prime_UTR_variant	MODIFIER	c.1159G>A c.1159G>A	CLN5	ENSG00000102805.16	transcript	ENST00000377453.9	protein_coding	4/4	1159		chr13	77002128
chr13:77002208	CTTAATCA others(4): Show CTTAATCATAGA	C C	1	a0001c0001t0023 a0001c0001t0023	1	HG01167.hp2 HG01167.hp2	3_prime_UTR_variant	MODIFIER	c.1241_1251delTAAT others(7): Show c.1241_1251delTAATCATAGAT	CLN5	ENSG00000102805.16	transcript	ENST00000377453.9	protein_coding	4/4	1241	INFO_REALIGN_3_PRIME	chr13	77002208
chr13:77002221	A A	G G	1	a0001c0001t0031 a0001c0001t0031	1	HG02004.hp1 HG02004.hp1	3_prime_UTR_variant	MODIFIER	c.1252A>G c.1252A>G	CLN5	ENSG00000102805.16	transcript	ENST00000377453.9	protein_coding	4/4	1252		chr13	77002221
chr13:77002248	G G	C C	9	a0002c0002t0002 a0002c0002t0038 a0002c0002t0039 others(6): Show a0002c0002t0002 a0002c0002t0038 a0002c0002t0039 a0002c0002t0040 a0002c0002t0041 a0002c0003t0003 a0002c0003t0017 a0002c0003t0034 a0002c0003t0035	79	HG00099.hp1 HG00099.hp2 HG00438.hp2 others(76): Show HG00099.hp1 HG00099.hp2 HG00438.hp2 HG01255.hp2 HG01257.hp1 HG01346.hp2 HG01928.hp1 HG01934.hp2 HG01975.hp2 HG01981.hp2 HG02015.hp1 HG02027.hp1 HG02056.hp1 HG02056.hp2 HG02071.hp2 HG02129.hp2 HG02132.hp1 HG02148.hp1 HG02155.hp2 HG02273.hp1 HG02293.hp1 HG02630.hp1 HG04115.hp2 HG04228.hp1 NA18942.hp1 NA18943.hp2 NA18945.hp2 NA18946.hp2 NA18951.hp2 NA18952.hp1 NA18952.hp2 NA18954.hp2 NA18956.hp2 NA18957.hp1 NA18960.hp2 NA18961.hp2 NA18964.hp1 NA18966.hp1 NA18967.hp2 NA18969.hp2 NA18971.hp2 NA18972.hp1 NA18974.hp2 NA18977.hp2 NA18978.hp1 NA18981.hp2 NA18982.hp1 NA18982.hp2 NA18983.hp1 NA18983.hp2 NA18987.hp1 NA18989.hp1 NA18990.hp2 NA18995.hp2 NA18997.hp1 NA18997.hp2 NA18998.hp1 NA18998.hp2 NA18999.hp1 NA19002.hp2 NA19006.hp2 NA19007.hp2 NA19010.hp1 NA19056.hp1 NA19058.hp1 NA19059.hp2 NA19060.hp2 NA19066.hp1 NA19072.hp2 NA19075.hp1 NA19077.hp1 NA19079.hp1 NA19081.hp2 NA19083.hp1 NA19084.hp2 NA19088.hp2 NA19089.hp1 NA20905.hp2 NA21309.hp1	3_prime_UTR_variant	MODIFIER	c.1279G>C c.1279G>C	CLN5	ENSG00000102805.16	transcript	ENST00000377453.9	protein_coding	4/4	1279		chr13	77002248
chr13:77002413	G G	A A	1	a0001c0001t0024 a0001c0001t0024	1	HG00639.hp2 HG00639.hp2	3_prime_UTR_variant	MODIFIER	c.1444G>A c.1444G>A	CLN5	ENSG00000102805.16	transcript	ENST00000377453.9	protein_coding	4/4	1444		chr13	77002413
chr13:77002422	G G	C C	1	a0002c0002t0020 a0002c0002t0020	1	NA20129.hp2 NA20129.hp2	3_prime_UTR_variant	MODIFIER	c.1453G>C c.1453G>C	CLN5	ENSG00000102805.16	transcript	ENST00000377453.9	protein_coding	4/4	1453		chr13	77002422
chr13:77002508	G G	C C	1	a0002c0002t0038 a0002c0002t0038	1	HG01975.hp2 HG01975.hp2	3_prime_UTR_variant	MODIFIER	c.1539G>C c.1539G>C	CLN5	ENSG00000102805.16	transcript	ENST00000377453.9	protein_coding	4/4	1539		chr13	77002508
chr13:77002539	T T	C C	1	a0002c0002t0009 a0002c0002t0009	6	HG01884.hp1 HG02451.hp1 HG02572.hp1 others(3): Show HG01884.hp1 HG02451.hp1 HG02572.hp1 HG02615.hp1 HG02622.hp2 HG02970.hp2	3_prime_UTR_variant	MODIFIER	c.1570T>C c.1570T>C	CLN5	ENSG00000102805.16	transcript	ENST00000377453.9	protein_coding	4/4	1570		chr13	77002539
chr13:77002819	A A	G G	1	a0001c0001t0030 a0001c0001t0030	1	HG01884.hp2 HG01884.hp2	3_prime_UTR_variant	MODIFIER	c.1850A>G c.1850A>G	CLN5	ENSG00000102805.16	transcript	ENST00000377453.9	protein_coding	4/4	1850		chr13	77002819
chr13:77002892	T T	C C	5	a0002c0002t0002 a0002c0002t0038 a0002c0002t0039 others(2): Show a0002c0002t0002 a0002c0002t0038 a0002c0002t0039 a0002c0002t0040 a0002c0002t0041	46	HG00099.hp1 HG00438.hp2 HG01255.hp2 others(43): Show HG00099.hp1 HG00438.hp2 HG01255.hp2 HG01257.hp1 HG01934.hp2 HG01975.hp2 HG01981.hp2 HG02027.hp1 HG02056.hp2 HG02071.hp2 HG02129.hp2 HG02148.hp1 HG02155.hp2 HG02273.hp1 HG02293.hp1 HG02630.hp1 HG04115.hp2 HG04228.hp1 NA18942.hp1 NA18952.hp1 NA18954.hp2 NA18957.hp1 NA18960.hp2 NA18961.hp2 NA18964.hp1 NA18967.hp2 NA18969.hp2 NA18971.hp2 NA18974.hp2 NA18982.hp1 NA18983.hp2 NA18990.hp2 NA18997.hp2 NA18998.hp2 NA18999.hp1 NA19006.hp2 NA19007.hp2 NA19066.hp1 NA19072.hp2 NA19077.hp1 NA19083.hp1 NA19084.hp2 NA19088.hp2 NA19089.hp1 NA20905.hp2 NA21309.hp1	3_prime_UTR_variant	MODIFIER	c.1923T>C c.1923T>C	CLN5	ENSG00000102805.16	transcript	ENST00000377453.9	protein_coding	4/4	1923		chr13	77002892
chr13:77003134	G G	A A	1	a0001c0001t0025 a0001c0001t0025	1	HG02145.hp2 HG02145.hp2	3_prime_UTR_variant	MODIFIER	c.2165G>A c.2165G>A	CLN5	ENSG00000102805.16	transcript	ENST00000377453.9	protein_coding	4/4	2165		chr13	77003134
chr13:77003148	TA TA	T T	20	a0001c0001t0005 a0001c0001t0007 a0001c0001t0010 others(17): Show a0001c0001t0005 a0001c0001t0007 a0001c0001t0010 a0001c0001t0032 a0001c0001t0037 a0002c0002t0004 a0002c0002t0008 a0002c0002t0009 a0002c0002t0012 a0002c0002t0015 a0002c0002t0018 a0002c0002t0020 a0002c0002t0022 a0002c0002t0036 a0002c0002t0041 a0002c0003t0017 a0002c0003t0035 a0002c0004t0006 a0002c0004t0043 a0004c0008t0008	99	HG00099.hp2 HG00323.hp1 HG00323.hp2 others(96): Show HG00099.hp2 HG00323.hp1 HG00323.hp2 HG00621.hp2 HG00735.hp1 HG00735.hp2 HG00741.hp1 HG01069.hp2 HG01070.hp1 HG01071.hp2 HG01099.hp1 HG01109.hp2 HG01243.hp2 HG01256.hp1 HG01258.hp2 HG01496.hp1 HG01884.hp1 HG01891.hp2 HG02055.hp1 HG02109.hp1 HG02132.hp2 HG02145.hp1 HG02257.hp2 HG02280.hp1 HG02451.hp1 HG02451.hp2 HG02486.hp1 HG02486.hp2 HG02559.hp2 HG02572.hp1 HG02615.hp1 HG02615.hp2 HG02622.hp1 HG02622.hp2 HG02630.hp2 HG02647.hp1 HG02717.hp1 HG02717.hp2 HG02723.hp1 HG02723.hp2 HG02809.hp2 HG02818.hp1 HG02818.hp2 HG02886.hp1 HG02886.hp2 HG02895.hp1 HG02896.hp1 HG02896.hp2 HG02897.hp1 HG02897.hp2 HG02922.hp1 HG02922.hp2 HG02965.hp1 HG02965.hp2 HG02970.hp1 HG02970.hp2 HG02976.hp1 HG03041.hp2 HG03098.hp1 HG03130.hp2 HG03139.hp1 HG03195.hp2 HG03209.hp1 HG03209.hp2 HG03225.hp1 HG03225.hp2 HG03453.hp1 HG03453.hp2 HG03471.hp1 HG03471.hp2 HG03486.hp1 HG03486.hp2 HG03516.hp1 HG03516.hp2 HG03540.hp1 HG03540.hp2 HG03579.hp1 HG03579.hp2 HG06807.hp1 HG06807.hp2 NA18522.hp1 NA18612.hp2 NA18906.hp1 NA18906.hp2 NA18940.hp1 NA18942.hp2 NA18969.hp2 NA18995.hp1 NA19005.hp2 NA19058.hp1 NA19059.hp1 NA19068.hp2 NA19075.hp1 NA19083.hp2 NA19090.hp1 NA19240.hp1 NA19240.hp2 NA20129.hp2 NA21309.hp2	3_prime_UTR_variant	MODIFIER	c.2196delA c.2196delA	CLN5	ENSG00000102805.16	transcript	ENST00000377453.9	protein_coding	4/4	2196	INFO_REALIGN_3_PRIME	chr13	77003148
chr13:77003259	C C	T T	1	a0002c0002t0015 a0002c0002t0015	3	HG01891.hp2 HG02886.hp2 NA19240.hp2 HG01891.hp2 HG02886.hp2 NA19240.hp2	3_prime_UTR_variant	MODIFIER	c.2290C>T c.2290C>T	CLN5	ENSG00000102805.16	transcript	ENST00000377453.9	protein_coding	4/4	2290		chr13	77003259
chr13:77003337	A A	G G	1	a0001c0001t0029 a0001c0001t0029	1	NA19064.hp1 NA19064.hp1	3_prime_UTR_variant	MODIFIER	c.2368A>G c.2368A>G	CLN5	ENSG00000102805.16	transcript	ENST00000377453.9	protein_coding	4/4	2368		chr13	77003337
chr13:77003413	A A	G G	5	a0002c0002t0004 a0002c0002t0012 a0002c0002t0018 others(2): Show a0002c0002t0004 a0002c0002t0012 a0002c0002t0018 a0002c0002t0020 a0002c0002t0021	30	HG00621.hp2 HG01069.hp2 HG01071.hp2 others(27): Show HG00621.hp2 HG01069.hp2 HG01071.hp2 HG02132.hp2 HG02257.hp2 HG02280.hp1 HG02486.hp2 HG02630.hp2 HG02717.hp1 HG02723.hp1 HG02723.hp2 HG02895.hp1 HG03195.hp2 HG03209.hp2 HG03453.hp2 HG03540.hp1 HG03579.hp1 HG03579.hp2 HG06807.hp1 NA18612.hp2 NA18906.hp2 NA18940.hp1 NA18995.hp1 NA19005.hp2 NA19059.hp1 NA19068.hp2 NA19089.hp2 NA19090.hp1 NA19240.hp1 NA20129.hp2	3_prime_UTR_variant	MODIFIER	c.2444A>G c.2444A>G	CLN5	ENSG00000102805.16	transcript	ENST00000377453.9	protein_coding	4/4	2444		chr13	77003413
chr13:77003469	A A	G G	1	a0001c0001t0028 a0001c0001t0028	1	NA18991.hp1 NA18991.hp1	3_prime_UTR_variant	MODIFIER	c.2500A>G c.2500A>G	CLN5	ENSG00000102805.16	transcript	ENST00000377453.9	protein_coding	4/4	2500		chr13	77003469
chr13:77003510	ATAG ATAG	A A	5	a0001c0001t0013 a0002c0003t0003 a0002c0003t0017 others(2): Show a0001c0001t0013 a0002c0003t0003 a0002c0003t0017 a0002c0003t0034 a0002c0003t0035	36	HG00099.hp2 HG01346.hp2 HG01928.hp1 others(33): Show HG00099.hp2 HG01346.hp2 HG01928.hp1 HG02015.hp1 HG02056.hp1 HG02132.hp1 NA18943.hp2 NA18945.hp2 NA18946.hp2 NA18951.hp2 NA18952.hp2 NA18956.hp2 NA18966.hp1 NA18972.hp1 NA18977.hp2 NA18978.hp1 NA18981.hp2 NA18982.hp2 NA18983.hp1 NA18987.hp1 NA18989.hp1 NA18995.hp2 NA18997.hp1 NA18998.hp1 NA19002.hp2 NA19010.hp1 NA19056.hp1 NA19058.hp1 NA19059.hp2 NA19060.hp1 NA19060.hp2 NA19072.hp1 NA19075.hp1 NA19075.hp2 NA19079.hp1 NA19081.hp2	3_prime_UTR_variant	MODIFIER	c.2546_2548delAGT c.2546_2548delAGT	CLN5	ENSG00000102805.16	transcript	ENST00000377453.9	protein_coding	4/4	2546	INFO_REALIGN_3_PRIME	chr13	77003510
chr13:77003519	G G	A A	1	a0002c0003t0034 a0002c0003t0034	1	NA18951.hp2 NA18951.hp2	3_prime_UTR_variant	MODIFIER	c.2550G>A c.2550G>A	CLN5	ENSG00000102805.16	transcript	ENST00000377453.9	protein_coding	4/4	2550		chr13	77003519
chr13:77003554	A A	G G	1	a0001c0001t0027 a0001c0001t0027	1	HG02647.hp2 HG02647.hp2	3_prime_UTR_variant	MODIFIER	c.2585A>G c.2585A>G	CLN5	ENSG00000102805.16	transcript	ENST00000377453.9	protein_coding	4/4	2585		chr13	77003554
chr13:77003574	G G	C C	1	a0001c0001t0037 a0001c0001t0037	1	NA18522.hp1 NA18522.hp1	3_prime_UTR_variant	MODIFIER	c.2605G>C c.2605G>C	CLN5	ENSG00000102805.16	transcript	ENST00000377453.9	protein_coding	4/4	2605		chr13	77003574
chr13:77003776	G G	A A	1	a0001c0001t0016 a0001c0001t0016	2	HG00423.hp2 NA18954.hp1 HG00423.hp2 NA18954.hp1	3_prime_UTR_variant	MODIFIER	c.2807G>A c.2807G>A	CLN5	ENSG00000102805.16	transcript	ENST00000377453.9	protein_coding	4/4	2807		chr13	77003776
chr13:77003941	G G	A A	1	a0002c0002t0042 a0002c0002t0042	1	HG01981.hp1 HG01981.hp1	3_prime_UTR_variant	MODIFIER	c.2972G>A c.2972G>A	CLN5	ENSG00000102805.16	transcript	ENST00000377453.9	protein_coding	4/4	2972		chr13	77003941
chr13:77004056	C C	G G	1	a0001c0001t0011 a0001c0001t0011	4	HG00423.hp1 NA18978.hp2 NA18981.hp1 others(1): Show HG00423.hp1 NA18978.hp2 NA18981.hp1 NA18994.hp1	3_prime_UTR_variant	MODIFIER	c.3087C>G c.3087C>G	CLN5	ENSG00000102805.16	transcript	ENST00000377453.9	protein_coding	4/4	3087		chr13	77004056
chr13:77004095	AAC AAC	A A	6	a0002c0002t0002 a0002c0002t0008 a0002c0002t0038 others(3): Show a0002c0002t0002 a0002c0002t0008 a0002c0002t0038 a0002c0002t0040 a0002c0002t0041 a0004c0008t0008	52	HG00099.hp1 HG00438.hp2 HG01255.hp2 others(49): Show HG00099.hp1 HG00438.hp2 HG01255.hp2 HG01256.hp1 HG01257.hp1 HG01258.hp2 HG01934.hp2 HG01975.hp2 HG01981.hp2 HG02027.hp1 HG02056.hp2 HG02071.hp2 HG02129.hp2 HG02148.hp1 HG02155.hp2 HG02273.hp1 HG02293.hp1 HG02922.hp1 HG02965.hp1 HG02970.hp1 HG03225.hp1 HG03486.hp2 HG04115.hp2 HG04228.hp1 NA18942.hp1 NA18952.hp1 NA18954.hp2 NA18957.hp1 NA18960.hp2 NA18961.hp2 NA18964.hp1 NA18967.hp2 NA18969.hp2 NA18971.hp2 NA18974.hp2 NA18982.hp1 NA18983.hp2 NA18990.hp2 NA18997.hp2 NA18998.hp2 NA18999.hp1 NA19006.hp2 NA19007.hp2 NA19066.hp1 NA19072.hp2 NA19077.hp1 NA19083.hp1 NA19084.hp2 NA19088.hp2 NA19089.hp1 NA20905.hp2 NA21309.hp1	3_prime_UTR_variant	MODIFIER	c.3130_3131delCA c.3130_3131delCA	CLN5	ENSG00000102805.16	transcript	ENST00000377453.9	protein_coding	4/4	3130	INFO_REALIGN_3_PRIME	chr13	77004095
chr13:77004115	T T	TA TA	28	a0001c0001t0005 a0001c0001t0007 a0001c0001t0025 others(25): Show a0001c0001t0005 a0001c0001t0007 a0001c0001t0025 a0001c0001t0032 a0001c0001t0037 a0002c0002t0002 a0002c0002t0004 a0002c0002t0008 a0002c0002t0009 a0002c0002t0012 a0002c0002t0015 a0002c0002t0018 a0002c0002t0020 a0002c0002t0021 a0002c0002t0022 a0002c0002t0036 a0002c0002t0038 a0002c0002t0039 a0002c0002t0040 a0002c0002t0041 a0002c0002t0042 a0002c0003t0003 a0002c0003t0017 a0002c0003t0034 a0002c0003t0035 a0002c0004t0006 a0002c0004t0043 a0004c0008t0008	172	HG00099.hp1 HG00099.hp2 HG00438.hp2 others(169): Show HG00099.hp1 HG00099.hp2 HG00438.hp2 HG00621.hp2 HG00735.hp1 HG00735.hp2 HG00741.hp1 HG01069.hp2 HG01071.hp2 HG01099.hp1 HG01109.hp2 HG01243.hp2 HG01255.hp2 HG01256.hp1 HG01257.hp1 HG01258.hp2 HG01346.hp2 HG01496.hp1 HG01884.hp1 HG01891.hp2 HG01928.hp1 HG01934.hp2 HG01975.hp2 HG01981.hp1 HG01981.hp2 HG02015.hp1 HG02027.hp1 HG02055.hp1 HG02056.hp1 HG02056.hp2 HG02071.hp2 HG02109.hp1 HG02129.hp2 HG02132.hp1 HG02132.hp2 HG02145.hp1 HG02145.hp2 HG02148.hp1 HG02155.hp2 HG02257.hp2 HG02273.hp1 HG02280.hp1 HG02293.hp1 HG02451.hp1 HG02451.hp2 HG02486.hp1 HG02486.hp2 HG02559.hp2 HG02572.hp1 HG02615.hp1 HG02615.hp2 HG02622.hp1 HG02622.hp2 HG02630.hp1 HG02630.hp2 HG02647.hp1 HG02717.hp1 HG02717.hp2 HG02723.hp1 HG02723.hp2 HG02809.hp2 HG02818.hp1 HG02818.hp2 HG02886.hp1 HG02886.hp2 HG02895.hp1 HG02896.hp1 HG02896.hp2 HG02897.hp1 HG02922.hp1 HG02922.hp2 HG02965.hp1 HG02965.hp2 HG02970.hp1 HG02970.hp2 HG02976.hp1 HG03041.hp2 HG03098.hp1 HG03130.hp2 HG03139.hp1 HG03195.hp2 HG03209.hp1 HG03209.hp2 HG03225.hp1 HG03225.hp2 HG03453.hp1 HG03453.hp2 HG03471.hp1 HG03471.hp2 HG03486.hp1 HG03486.hp2 HG03516.hp1 HG03516.hp2 HG03540.hp1 HG03540.hp2 HG03579.hp1 HG03579.hp2 HG04115.hp2 HG04228.hp1 HG06807.hp1 HG06807.hp2 NA18522.hp1 NA18612.hp2 NA18906.hp1 NA18906.hp2 NA18940.hp1 NA18942.hp1 NA18943.hp2 NA18945.hp2 NA18946.hp2 NA18951.hp2 NA18952.hp1 NA18952.hp2 NA18954.hp2 NA18956.hp2 NA18957.hp1 NA18960.hp2 NA18961.hp2 NA18964.hp1 NA18966.hp1 NA18967.hp2 NA18969.hp2 NA18971.hp2 NA18972.hp1 NA18974.hp2 NA18977.hp2 NA18978.hp1 NA18981.hp2 NA18982.hp1 NA18982.hp2 NA18983.hp1 NA18983.hp2 NA18987.hp1 NA18989.hp1 NA18990.hp2 NA18995.hp1 NA18995.hp2 NA18997.hp1 NA18997.hp2 NA18998.hp1 NA18998.hp2 NA18999.hp1 NA19002.hp2 NA19005.hp2 NA19006.hp2 NA19007.hp2 NA19010.hp1 NA19056.hp1 NA19058.hp1 NA19059.hp1 NA19059.hp2 NA19060.hp2 NA19066.hp1 NA19068.hp2 NA19072.hp2 NA19075.hp1 NA19077.hp1 NA19079.hp1 NA19081.hp2 NA19083.hp1 NA19083.hp2 NA19084.hp2 NA19088.hp2 NA19089.hp1 NA19089.hp2 NA19090.hp1 NA19240.hp1 NA19240.hp2 NA20129.hp2 NA20905.hp2 NA21309.hp1 NA21309.hp2	3_prime_UTR_variant	MODIFIER	c.3148dupA c.3148dupA	CLN5	ENSG00000102805.16	transcript	ENST00000377453.9	protein_coding	4/4	3149	INFO_REALIGN_3_PRIME	chr13	77004115
chr13:77004328	T T	C C	1	a0001c0001t0027 a0001c0001t0027	1	HG02647.hp2 HG02647.hp2	3_prime_UTR_variant	MODIFIER	c.3359T>C c.3359T>C	CLN5	ENSG00000102805.16	transcript	ENST00000377453.9	protein_coding	4/4	3359		chr13	77004328
chr13:77004364	G G	C C	2	a0002c0002t0015 a0002c0002t0036 a0002c0002t0015 a0002c0002t0036	4	HG01891.hp2 HG02886.hp2 HG02976.hp1 others(1): Show HG01891.hp2 HG02886.hp2 HG02976.hp1 NA19240.hp2	3_prime_UTR_variant	MODIFIER	c.3395G>C c.3395G>C	CLN5	ENSG00000102805.16	transcript	ENST00000377453.9	protein_coding	4/4	3395		chr13	77004364
chr13:77004377	A A	G G	1	a0002c0004t0043 a0002c0004t0043	1	HG00741.hp1 HG00741.hp1	3_prime_UTR_variant	MODIFIER	c.3408A>G c.3408A>G	CLN5	ENSG00000102805.16	transcript	ENST00000377453.9	protein_coding	4/4	3408		chr13	77004377
chr13:77004465	T T	C C	2	a0001c0001t0005 a0001c0001t0032 a0001c0001t0005 a0001c0001t0032	17	HG00735.hp2 HG02109.hp1 HG02145.hp1 others(14): Show HG00735.hp2 HG02109.hp1 HG02145.hp1 HG02717.hp2 HG02809.hp2 HG02818.hp2 HG02922.hp2 HG03041.hp2 HG03098.hp1 HG03139.hp1 HG03225.hp2 HG03453.hp1 HG03471.hp2 HG03516.hp1 HG03516.hp2 NA18906.hp1 NA21309.hp2	3_prime_UTR_variant	MODIFIER	c.3496T>C c.3496T>C	CLN5	ENSG00000102805.16	transcript	ENST00000377453.9	protein_coding	4/4	3496		chr13	77004465
chr13:77004615	G G	T T	1	a0001c0001t0007 a0001c0001t0007	8	HG02559.hp2 HG02647.hp1 HG02818.hp1 others(5): Show HG02559.hp2 HG02647.hp1 HG02818.hp1 HG02896.hp1 HG02965.hp2 HG03471.hp1 HG03486.hp1 HG03540.hp2	3_prime_UTR_variant	MODIFIER	c.3646G>T c.3646G>T	CLN5	ENSG00000102805.16	transcript	ENST00000377453.9	protein_coding	4/4	3646		chr13	77004615
chr13:77004684	TA TA	T T	8	a0002c0002t0002 a0002c0002t0036 a0002c0002t0038 others(5): Show a0002c0002t0002 a0002c0002t0036 a0002c0002t0038 a0002c0002t0040 a0002c0002t0041 a0002c0003t0003 a0002c0003t0017 a0002c0003t0034	78	HG00099.hp1 HG00099.hp2 HG00438.hp2 others(75): Show HG00099.hp1 HG00099.hp2 HG00438.hp2 HG01255.hp2 HG01257.hp1 HG01346.hp2 HG01928.hp1 HG01934.hp2 HG01975.hp2 HG01981.hp2 HG02015.hp1 HG02027.hp1 HG02056.hp1 HG02056.hp2 HG02071.hp2 HG02129.hp2 HG02132.hp1 HG02148.hp1 HG02155.hp2 HG02273.hp1 HG02293.hp1 HG02976.hp1 HG04115.hp2 HG04228.hp1 NA18942.hp1 NA18943.hp2 NA18945.hp2 NA18946.hp2 NA18951.hp2 NA18952.hp1 NA18952.hp2 NA18954.hp2 NA18956.hp2 NA18957.hp1 NA18960.hp2 NA18961.hp2 NA18964.hp1 NA18966.hp1 NA18967.hp2 NA18969.hp2 NA18971.hp2 NA18972.hp1 NA18974.hp2 NA18977.hp2 NA18978.hp1 NA18981.hp2 NA18982.hp1 NA18982.hp2 NA18983.hp1 NA18983.hp2 NA18987.hp1 NA18989.hp1 NA18990.hp2 NA18995.hp2 NA18997.hp1 NA18997.hp2 NA18998.hp1 NA18998.hp2 NA18999.hp1 NA19002.hp2 NA19006.hp2 NA19007.hp2 NA19010.hp1 NA19056.hp1 NA19058.hp1 NA19059.hp2 NA19060.hp2 NA19066.hp1 NA19072.hp2 NA19077.hp1 NA19079.hp1 NA19081.hp2 NA19083.hp1 NA19084.hp2 NA19088.hp2 NA19089.hp1 NA20905.hp2 NA21309.hp1	3_prime_UTR_variant	MODIFIER	c.3727delA c.3727delA	CLN5	ENSG00000102805.16	transcript	ENST00000377453.9	protein_coding	4/4	3727	INFO_REALIGN_3_PRIME	chr13	77004684
chr13:77004911	A A	G G	1	a0002c0002t0040 a0002c0002t0040	1	HG02155.hp2 HG02155.hp2	3_prime_UTR_variant	MODIFIER	c.3942A>G c.3942A>G	CLN5	ENSG00000102805.16	transcript	ENST00000377453.9	protein_coding	4/4	3942		chr13	77004911
chr13:77004912	C C	T T	5	a0002c0002t0004 a0002c0002t0012 a0002c0002t0018 others(2): Show a0002c0002t0004 a0002c0002t0012 a0002c0002t0018 a0002c0002t0020 a0002c0002t0021	30	HG00621.hp2 HG01069.hp2 HG01071.hp2 others(27): Show HG00621.hp2 HG01069.hp2 HG01071.hp2 HG02132.hp2 HG02257.hp2 HG02280.hp1 HG02486.hp2 HG02630.hp2 HG02717.hp1 HG02723.hp1 HG02723.hp2 HG02895.hp1 HG03195.hp2 HG03209.hp2 HG03453.hp2 HG03540.hp1 HG03579.hp1 HG03579.hp2 HG06807.hp1 NA18612.hp2 NA18906.hp2 NA18940.hp1 NA18995.hp1 NA19005.hp2 NA19059.hp1 NA19068.hp2 NA19089.hp2 NA19090.hp1 NA19240.hp1 NA20129.hp2	3_prime_UTR_variant	MODIFIER	c.3943C>T c.3943C>T	CLN5	ENSG00000102805.16	transcript	ENST00000377453.9	protein_coding	4/4	3943		chr13	77004912
chr13:77005014	C C	G G	1	a0001c0001t0026 a0001c0001t0026	1	HG00544.hp2 HG00544.hp2	3_prime_UTR_variant	MODIFIER	c.4045C>G c.4045C>G	CLN5	ENSG00000102805.16	transcript	ENST00000377453.9	protein_coding	4/4	4045		chr13	77005014

chr:pos	ref	alt	# # of ghapid:genebody level	ghapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	genename	geneid	featuretype	featureid	genebody_biotype	rank	status	chr	pos
chr13:76992279	C C	T T	8	a0002c0002t0002g0005 a0002c0002t0002g0006 a0002c0002t0002g0025 others(5): Show a0002c0002t0002g0005 a0002c0002t0002g0006 a0002c0002t0002g0025 a0002c0002t0002g0031 a0002c0002t0038g0068 a0002c0002t0039g0067 a0002c0002t0040g0005 a0002c0002t0041g0005	46	HG00099.hp1 HG00438.hp2 HG01255.hp2 others(43): Show HG00099.hp1 HG00438.hp2 HG01255.hp2 HG01257.hp1 HG01934.hp2 HG01975.hp2 HG01981.hp2 HG02027.hp1 HG02056.hp2 HG02071.hp2 HG02129.hp2 HG02148.hp1 HG02155.hp2 HG02273.hp1 HG02293.hp1 HG02630.hp1 HG04115.hp2 HG04228.hp1 NA18942.hp1 NA18952.hp1 NA18954.hp2 NA18957.hp1 NA18960.hp2 NA18961.hp2 NA18964.hp1 NA18967.hp2 NA18969.hp2 NA18971.hp2 NA18974.hp2 NA18982.hp1 NA18983.hp2 NA18990.hp2 NA18997.hp2 NA18998.hp2 NA18999.hp1 NA19006.hp2 NA19007.hp2 NA19066.hp1 NA19072.hp2 NA19077.hp1 NA19083.hp1 NA19084.hp2 NA19088.hp2 NA19089.hp1 NA20905.hp2 NA21309.hp1	splice_region_variant&intron_variant	LOW	c.173+8C>T c.173+8C>T	CLN5	ENSG00000102805.16	transcript	ENST00000377453.9	protein_coding	1/3		chr13	76992279
chr13:76992289	C C	T T	14	a0002c0002t0004g0007 a0002c0002t0004g0010 a0002c0002t0004g0061 others(11): Show a0002c0002t0004g0007 a0002c0002t0004g0010 a0002c0002t0004g0061 a0002c0002t0004g0062 a0002c0002t0004g0063 a0002c0002t0004g0064 a0002c0002t0004g0065 a0002c0002t0009g0030 a0002c0002t0012g0007 a0002c0002t0012g0066 a0002c0002t0018g0007 a0002c0002t0020g0007 a0002c0002t0021g0010 a0002c0002t0042g0030	32	HG00621.hp2 HG01069.hp2 HG01071.hp2 others(29): Show HG00621.hp2 HG01069.hp2 HG01071.hp2 HG01981.hp1 HG02132.hp2 HG02257.hp2 HG02280.hp1 HG02486.hp2 HG02622.hp2 HG02630.hp2 HG02717.hp1 HG02723.hp1 HG02723.hp2 HG02895.hp1 HG03195.hp2 HG03209.hp2 HG03453.hp2 HG03540.hp1 HG03579.hp1 HG03579.hp2 HG06807.hp1 NA18612.hp2 NA18906.hp2 NA18940.hp1 NA18995.hp1 NA19005.hp2 NA19059.hp1 NA19068.hp2 NA19089.hp2 NA19090.hp1 NA19240.hp1 NA20129.hp2	intron_variant	MODIFIER	c.173+18C>T c.173+18C>T	CLN5	ENSG00000102805.16	transcript	ENST00000377453.9	protein_coding	1/3		chr13	76992289
chr13:76992458	C C	T T	1	a0001c0001t0014g0024 a0001c0001t0014g0024	3	NA18967.hp1 NA18970.hp2 NA19006.hp1 NA18967.hp1 NA18970.hp2 NA19006.hp1	intron_variant	MODIFIER	c.173+187C>T c.173+187C>T	CLN5	ENSG00000102805.16	transcript	ENST00000377453.9	protein_coding	1/3		chr13	76992458
chr13:76992469	G G	T T	1	a0002c0002t0015g0023 a0002c0002t0015g0023	3	HG01891.hp2 HG02886.hp2 NA19240.hp2 HG01891.hp2 HG02886.hp2 NA19240.hp2	intron_variant	MODIFIER	c.173+198G>T c.173+198G>T	CLN5	ENSG00000102805.16	transcript	ENST00000377453.9	protein_coding	1/3		chr13	76992469
chr13:76992484	G G	A A	3	a0002c0002t0008g0017 a0002c0002t0008g0018 a0004c0008t0008g0032 a0002c0002t0008g0017 a0002c0002t0008g0018 a0004c0008t0008g0032	7	HG01256.hp1 HG01258.hp2 HG02922.hp1 others(4): Show HG01256.hp1 HG01258.hp2 HG02922.hp1 HG02965.hp1 HG02970.hp1 HG03225.hp1 HG03486.hp2	intron_variant	MODIFIER	c.173+213G>A c.173+213G>A	CLN5	ENSG00000102805.16	transcript	ENST00000377453.9	protein_coding	1/3		chr13	76992484
chr13:76992509	C C	T T	3	a0002c0002t0008g0017 a0002c0002t0008g0018 a0004c0008t0008g0032 a0002c0002t0008g0017 a0002c0002t0008g0018 a0004c0008t0008g0032	7	HG01256.hp1 HG01258.hp2 HG02922.hp1 others(4): Show HG01256.hp1 HG01258.hp2 HG02922.hp1 HG02965.hp1 HG02970.hp1 HG03225.hp1 HG03486.hp2	intron_variant	MODIFIER	c.173+238C>T c.173+238C>T	CLN5	ENSG00000102805.16	transcript	ENST00000377453.9	protein_coding	1/3		chr13	76992509
chr13:76992530	G G	A A	1	a0001c0001t0001g0033 a0001c0001t0001g0033	1	HG01081.hp2 HG01081.hp2	intron_variant	MODIFIER	c.173+259G>A c.173+259G>A	CLN5	ENSG00000102805.16	transcript	ENST00000377453.9	protein_coding	1/3		chr13	76992530
chr13:76992702	G G	T T	1	a0001c0001t0025g0060 a0001c0001t0025g0060	1	HG02145.hp2 HG02145.hp2	intron_variant	MODIFIER	c.173+431G>T c.173+431G>T	CLN5	ENSG00000102805.16	transcript	ENST00000377453.9	protein_coding	1/3		chr13	76992702
chr13:76992763	A A	G G	1	a0001c0001t0007g0011 a0001c0001t0007g0011	8	HG02559.hp2 HG02647.hp1 HG02818.hp1 others(5): Show HG02559.hp2 HG02647.hp1 HG02818.hp1 HG02896.hp1 HG02965.hp2 HG03471.hp1 HG03486.hp1 HG03540.hp2	intron_variant	MODIFIER	c.173+492A>G c.173+492A>G	CLN5	ENSG00000102805.16	transcript	ENST00000377453.9	protein_coding	1/3		chr13	76992763
chr13:76992784	C C	T T	1	a0001c0001t0001g0059 a0001c0001t0001g0059	1	NA18970.hp1 NA18970.hp1	intron_variant	MODIFIER	c.173+513C>T c.173+513C>T	CLN5	ENSG00000102805.16	transcript	ENST00000377453.9	protein_coding	1/3		chr13	76992784
chr13:76992788	G G	C C	1	a0001c0001t0001g0026 a0001c0001t0001g0026	2	HG01167.hp1 HG01169.hp2 HG01167.hp1 HG01169.hp2	intron_variant	MODIFIER	c.173+517G>C c.173+517G>C	CLN5	ENSG00000102805.16	transcript	ENST00000377453.9	protein_coding	1/3		chr13	76992788
chr13:76992793	C C	T T	1	a0001c0001t0033g0058 a0001c0001t0033g0058	1	NA18993.hp1 NA18993.hp1	intron_variant	MODIFIER	c.173+522C>T c.173+522C>T	CLN5	ENSG00000102805.16	transcript	ENST00000377453.9	protein_coding	1/3		chr13	76992793
chr13:76992805	T T	G G	1	a0001c0001t0001g0059 a0001c0001t0001g0059	1	NA18970.hp1 NA18970.hp1	intron_variant	MODIFIER	c.173+534T>G c.173+534T>G	CLN5	ENSG00000102805.16	transcript	ENST00000377453.9	protein_coding	1/3		chr13	76992805
chr13:76992817	G G	C C	1	a0001c0001t0001g0059 a0001c0001t0001g0059	1	NA18970.hp1 NA18970.hp1	intron_variant	MODIFIER	c.173+546G>C c.173+546G>C	CLN5	ENSG00000102805.16	transcript	ENST00000377453.9	protein_coding	1/3		chr13	76992817
chr13:76992819	T T	C C	1	a0001c0001t0001g0059 a0001c0001t0001g0059	1	NA18970.hp1 NA18970.hp1	intron_variant	MODIFIER	c.173+548T>C c.173+548T>C	CLN5	ENSG00000102805.16	transcript	ENST00000377453.9	protein_coding	1/3		chr13	76992819
chr13:76992820	T T	C C	1	a0001c0001t0001g0059 a0001c0001t0001g0059	1	NA18970.hp1 NA18970.hp1	intron_variant	MODIFIER	c.173+549T>C c.173+549T>C	CLN5	ENSG00000102805.16	transcript	ENST00000377453.9	protein_coding	1/3		chr13	76992820
chr13:76992827	G G	T T	1	a0001c0001t0001g0059 a0001c0001t0001g0059	1	NA18970.hp1 NA18970.hp1	intron_variant	MODIFIER	c.173+556G>T c.173+556G>T	CLN5	ENSG00000102805.16	transcript	ENST00000377453.9	protein_coding	1/3		chr13	76992827
chr13:76992828	C C	G G	1	a0001c0001t0001g0059 a0001c0001t0001g0059	1	NA18970.hp1 NA18970.hp1	intron_variant	MODIFIER	c.173+557C>G c.173+557C>G	CLN5	ENSG00000102805.16	transcript	ENST00000377453.9	protein_coding	1/3		chr13	76992828
chr13:76992829	T T	G G	1	a0001c0001t0001g0059 a0001c0001t0001g0059	1	NA18970.hp1 NA18970.hp1	intron_variant	MODIFIER	c.173+558T>G c.173+558T>G	CLN5	ENSG00000102805.16	transcript	ENST00000377453.9	protein_coding	1/3		chr13	76992829
chr13:76992831	T T	C C	1	a0001c0001t0001g0059 a0001c0001t0001g0059	1	NA18970.hp1 NA18970.hp1	intron_variant	MODIFIER	c.173+560T>C c.173+560T>C	CLN5	ENSG00000102805.16	transcript	ENST00000377453.9	protein_coding	1/3		chr13	76992831
chr13:76992835	C C	G G	1	a0001c0001t0001g0059 a0001c0001t0001g0059	1	NA18970.hp1 NA18970.hp1	intron_variant	MODIFIER	c.173+564C>G c.173+564C>G	CLN5	ENSG00000102805.16	transcript	ENST00000377453.9	protein_coding	1/3		chr13	76992835
chr13:76992836	C C	A A	1	a0001c0001t0001g0059 a0001c0001t0001g0059	1	NA18970.hp1 NA18970.hp1	intron_variant	MODIFIER	c.173+565C>A c.173+565C>A	CLN5	ENSG00000102805.16	transcript	ENST00000377453.9	protein_coding	1/3		chr13	76992836
chr13:76992843	C C	T T	1	a0001c0001t0001g0059 a0001c0001t0001g0059	1	NA18970.hp1 NA18970.hp1	intron_variant	MODIFIER	c.173+572C>T c.173+572C>T	CLN5	ENSG00000102805.16	transcript	ENST00000377453.9	protein_coding	1/3		chr13	76992843
chr13:76992870	A A	G G	1	a0001c0001t0001g0059 a0001c0001t0001g0059	1	NA18970.hp1 NA18970.hp1	intron_variant	MODIFIER	c.173+599A>G c.173+599A>G	CLN5	ENSG00000102805.16	transcript	ENST00000377453.9	protein_coding	1/3		chr13	76992870
chr13:76992873	C C	G G	1	a0001c0001t0001g0059 a0001c0001t0001g0059	1	NA18970.hp1 NA18970.hp1	intron_variant	MODIFIER	c.173+602C>G c.173+602C>G	CLN5	ENSG00000102805.16	transcript	ENST00000377453.9	protein_coding	1/3		chr13	76992873
chr13:76993003	A A	G G	1	a0001c0001t0001g0016 a0001c0001t0001g0016	4	NA18948.hp1 NA19062.hp1 NA19086.hp2 others(1): Show NA18948.hp1 NA19062.hp1 NA19086.hp2 NA19091.hp2	intron_variant	MODIFIER	c.173+732A>G c.173+732A>G	CLN5	ENSG00000102805.16	transcript	ENST00000377453.9	protein_coding	1/3		chr13	76993003
chr13:76993332	A A	G G	1	a0001c0001t0007g0011 a0001c0001t0007g0011	8	HG02559.hp2 HG02647.hp1 HG02818.hp1 others(5): Show HG02559.hp2 HG02647.hp1 HG02818.hp1 HG02896.hp1 HG02965.hp2 HG03471.hp1 HG03486.hp1 HG03540.hp2	intron_variant	MODIFIER	c.173+1061A>G c.173+1061A>G	CLN5	ENSG00000102805.16	transcript	ENST00000377453.9	protein_coding	1/3		chr13	76993332
chr13:76993410	T T	C C	1	a0001c0001t0037g0034 a0001c0001t0037g0034	1	NA18522.hp1 NA18522.hp1	intron_variant	MODIFIER	c.173+1139T>C c.173+1139T>C	CLN5	ENSG00000102805.16	transcript	ENST00000377453.9	protein_coding	1/3		chr13	76993410
chr13:76993570	T T	G G	1	a0001c0001t0001g0027 a0001c0001t0001g0027	2	HG02257.hp1 HG02809.hp1 HG02257.hp1 HG02809.hp1	intron_variant	MODIFIER	c.173+1299T>G c.173+1299T>G	CLN5	ENSG00000102805.16	transcript	ENST00000377453.9	protein_coding	1/3		chr13	76993570
chr13:76993600	T T	C C	3	a0002c0002t0008g0017 a0002c0002t0008g0018 a0004c0008t0008g0032 a0002c0002t0008g0017 a0002c0002t0008g0018 a0004c0008t0008g0032	7	HG01256.hp1 HG01258.hp2 HG02922.hp1 others(4): Show HG01256.hp1 HG01258.hp2 HG02922.hp1 HG02965.hp1 HG02970.hp1 HG03225.hp1 HG03486.hp2	intron_variant	MODIFIER	c.173+1329T>C c.173+1329T>C	CLN5	ENSG00000102805.16	transcript	ENST00000377453.9	protein_coding	1/3		chr13	76993600
chr13:76993951	C C	A A	1	a0001c0001t0001g0035 a0001c0001t0001g0035	1	NA19030.hp1 NA19030.hp1	intron_variant	MODIFIER	c.174-1112C>A c.174-1112C>A	CLN5	ENSG00000102805.16	transcript	ENST00000377453.9	protein_coding	1/3		chr13	76993951
chr13:76994051	A A	G G	1	a0001c0001t0001g0057 a0001c0001t0001g0057	1	HG01074.hp1 HG01074.hp1	intron_variant	MODIFIER	c.174-1012A>G c.174-1012A>G	CLN5	ENSG00000102805.16	transcript	ENST00000377453.9	protein_coding	1/3		chr13	76994051
chr13:76994112	G G	A A	1	a0002c0003t0003g0036 a0002c0003t0003g0036	1	HG02056.hp1 HG02056.hp1	intron_variant	MODIFIER	c.174-951G>A c.174-951G>A	CLN5	ENSG00000102805.16	transcript	ENST00000377453.9	protein_coding	1/3		chr13	76994112
chr13:76994124	C C	T T	1	a0004c0008t0008g0032 a0004c0008t0008g0032	1	HG03225.hp1 HG03225.hp1	intron_variant	MODIFIER	c.174-939C>T c.174-939C>T	CLN5	ENSG00000102805.16	transcript	ENST00000377453.9	protein_coding	1/3		chr13	76994124
chr13:76994510	A A	G G	2	a0001c0001t0023g0029 a0001c0001t0031g0029 a0001c0001t0023g0029 a0001c0001t0031g0029	2	HG01167.hp2 HG02004.hp1 HG01167.hp2 HG02004.hp1	intron_variant	MODIFIER	c.174-553A>G c.174-553A>G	CLN5	ENSG00000102805.16	transcript	ENST00000377453.9	protein_coding	1/3		chr13	76994510
chr13:76994597	A A	G G	8	a0002c0002t0002g0005 a0002c0002t0002g0006 a0002c0002t0002g0025 others(5): Show a0002c0002t0002g0005 a0002c0002t0002g0006 a0002c0002t0002g0025 a0002c0002t0002g0031 a0002c0002t0038g0068 a0002c0002t0039g0067 a0002c0002t0040g0005 a0002c0002t0041g0005	46	HG00099.hp1 HG00438.hp2 HG01255.hp2 others(43): Show HG00099.hp1 HG00438.hp2 HG01255.hp2 HG01257.hp1 HG01934.hp2 HG01975.hp2 HG01981.hp2 HG02027.hp1 HG02056.hp2 HG02071.hp2 HG02129.hp2 HG02148.hp1 HG02155.hp2 HG02273.hp1 HG02293.hp1 HG02630.hp1 HG04115.hp2 HG04228.hp1 NA18942.hp1 NA18952.hp1 NA18954.hp2 NA18957.hp1 NA18960.hp2 NA18961.hp2 NA18964.hp1 NA18967.hp2 NA18969.hp2 NA18971.hp2 NA18974.hp2 NA18982.hp1 NA18983.hp2 NA18990.hp2 NA18997.hp2 NA18998.hp2 NA18999.hp1 NA19006.hp2 NA19007.hp2 NA19066.hp1 NA19072.hp2 NA19077.hp1 NA19083.hp1 NA19084.hp2 NA19088.hp2 NA19089.hp1 NA20905.hp2 NA21309.hp1	intron_variant	MODIFIER	c.174-466A>G c.174-466A>G	CLN5	ENSG00000102805.16	transcript	ENST00000377453.9	protein_coding	1/3		chr13	76994597
chr13:76994602	T T	C C	49	a0001c0001t0005g0008 a0001c0001t0005g0041 a0001c0001t0005g0042 others(46): Show a0001c0001t0005g0008 a0001c0001t0005g0041 a0001c0001t0005g0042 a0001c0001t0005g0043 a0001c0001t0007g0011 a0001c0001t0025g0060 a0001c0001t0032g0008 a0001c0001t0037g0034 a0002c0002t0002g0005 a0002c0002t0002g0006 a0002c0002t0002g0025 a0002c0002t0002g0031 a0002c0002t0004g0007 a0002c0002t0004g0010 a0002c0002t0004g0061 a0002c0002t0004g0062 a0002c0002t0004g0063 a0002c0002t0004g0064 a0002c0002t0004g0065 a0002c0002t0008g0017 a0002c0002t0008g0018 a0002c0002t0009g0019 a0002c0002t0009g0028 a0002c0002t0009g0030 a0002c0002t0012g0007 a0002c0002t0012g0066 a0002c0002t0015g0023 a0002c0002t0018g0007 a0002c0002t0020g0007 a0002c0002t0021g0010 a0002c0002t0036g0037 a0002c0002t0038g0068 a0002c0002t0039g0067 a0002c0002t0040g0005 a0002c0002t0041g0005 a0002c0002t0042g0030 a0002c0003t0003g0004 a0002c0003t0003g0014 a0002c0003t0003g0036 a0002c0003t0003g0038 a0002c0003t0017g0004 a0002c0003t0034g0014 a0002c0003t0035g0004 a0002c0004t0006g0009 a0002c0004t0006g0012 a0002c0004t0006g0039 a0002c0004t0006g0040 a0002c0004t0043g0009 a0004c0008t0008g0032	171	HG00099.hp1 HG00099.hp2 HG00438.hp2 others(168): Show HG00099.hp1 HG00099.hp2 HG00438.hp2 HG00621.hp2 HG00735.hp1 HG00735.hp2 HG00741.hp1 HG01069.hp2 HG01071.hp2 HG01099.hp1 HG01109.hp2 HG01243.hp2 HG01255.hp2 HG01256.hp1 HG01257.hp1 HG01258.hp2 HG01346.hp2 HG01496.hp1 HG01884.hp1 HG01891.hp2 HG01928.hp1 HG01934.hp2 HG01975.hp2 HG01981.hp1 HG01981.hp2 HG02015.hp1 HG02027.hp1 HG02055.hp1 HG02056.hp1 HG02056.hp2 HG02071.hp2 HG02109.hp1 HG02129.hp2 HG02132.hp1 HG02132.hp2 HG02145.hp1 HG02145.hp2 HG02148.hp1 HG02155.hp2 HG02257.hp2 HG02273.hp1 HG02280.hp1 HG02293.hp1 HG02451.hp1 HG02451.hp2 HG02486.hp1 HG02486.hp2 HG02559.hp2 HG02572.hp1 HG02615.hp1 HG02615.hp2 HG02622.hp1 HG02622.hp2 HG02630.hp1 HG02630.hp2 HG02647.hp1 HG02717.hp1 HG02717.hp2 HG02723.hp1 HG02723.hp2 HG02809.hp2 HG02818.hp1 HG02818.hp2 HG02886.hp1 HG02886.hp2 HG02895.hp1 HG02896.hp1 HG02896.hp2 HG02897.hp1 HG02922.hp1 HG02922.hp2 HG02965.hp1 HG02965.hp2 HG02970.hp1 HG02970.hp2 HG02976.hp1 HG03041.hp2 HG03098.hp1 HG03130.hp2 HG03139.hp1 HG03195.hp2 HG03209.hp1 HG03209.hp2 HG03225.hp1 HG03225.hp2 HG03453.hp1 HG03453.hp2 HG03471.hp1 HG03471.hp2 HG03486.hp1 HG03486.hp2 HG03516.hp1 HG03516.hp2 HG03540.hp1 HG03540.hp2 HG03579.hp1 HG03579.hp2 HG04115.hp2 HG04228.hp1 HG06807.hp1 HG06807.hp2 NA18522.hp1 NA18612.hp2 NA18906.hp1 NA18906.hp2 NA18940.hp1 NA18942.hp1 NA18943.hp2 NA18945.hp2 NA18946.hp2 NA18951.hp2 NA18952.hp1 NA18952.hp2 NA18954.hp2 NA18956.hp2 NA18957.hp1 NA18960.hp2 NA18961.hp2 NA18964.hp1 NA18966.hp1 NA18967.hp2 NA18969.hp2 NA18971.hp2 NA18972.hp1 NA18974.hp2 NA18977.hp2 NA18978.hp1 NA18981.hp2 NA18982.hp1 NA18982.hp2 NA18983.hp1 NA18983.hp2 NA18987.hp1 NA18989.hp1 NA18990.hp2 NA18995.hp1 NA18995.hp2 NA18997.hp1 NA18997.hp2 NA18998.hp1 NA18998.hp2 NA18999.hp1 NA19002.hp2 NA19005.hp2 NA19006.hp2 NA19007.hp2 NA19010.hp1 NA19056.hp1 NA19058.hp1 NA19059.hp1 NA19059.hp2 NA19060.hp2 NA19066.hp1 NA19068.hp2 NA19072.hp2 NA19075.hp1 NA19077.hp1 NA19079.hp1 NA19081.hp2 NA19083.hp1 NA19084.hp2 NA19088.hp2 NA19089.hp1 NA19089.hp2 NA19090.hp1 NA19240.hp1 NA19240.hp2 NA20129.hp2 NA20905.hp2 NA21309.hp1 NA21309.hp2	intron_variant	MODIFIER	c.174-461T>C c.174-461T>C	CLN5	ENSG00000102805.16	transcript	ENST00000377453.9	protein_coding	1/3		chr13	76994602
chr13:76994630	G G	A A	1	a0002c0002t0008g0017 a0002c0002t0008g0017	3	HG01256.hp1 HG01258.hp2 HG02922.hp1 HG01256.hp1 HG01258.hp2 HG02922.hp1	intron_variant	MODIFIER	c.174-433G>A c.174-433G>A	CLN5	ENSG00000102805.16	transcript	ENST00000377453.9	protein_coding	1/3		chr13	76994630
chr13:76994779	C C	A A	1	a0002c0002t0036g0037 a0002c0002t0036g0037	1	HG02976.hp1 HG02976.hp1	intron_variant	MODIFIER	c.174-284C>A c.174-284C>A	CLN5	ENSG00000102805.16	transcript	ENST00000377453.9	protein_coding	1/3		chr13	76994779
chr13:76995036	A A	C C	1	a0001c0001t0001g0013 a0001c0001t0001g0013	5	NA18946.hp1 NA18972.hp2 NA18980.hp2 others(2): Show NA18946.hp1 NA18972.hp2 NA18980.hp2 NA19005.hp1 NA19011.hp1	intron_variant	MODIFIER	c.174-27A>C c.174-27A>C	CLN5	ENSG00000102805.16	transcript	ENST00000377453.9	protein_coding	1/3		chr13	76995036
chr13:76995308	A A	G G	1	a0001c0001t0001g0056 a0001c0001t0001g0056	1	NA18984.hp1 NA18984.hp1	intron_variant	MODIFIER	c.339+80A>G c.339+80A>G	CLN5	ENSG00000102805.16	transcript	ENST00000377453.9	protein_coding	2/3		chr13	76995308
chr13:76995382	T T	C C	1	a0001c0001t0001g0044 a0001c0001t0001g0044	1	HG00280.hp1 HG00280.hp1	intron_variant	MODIFIER	c.339+154T>C c.339+154T>C	CLN5	ENSG00000102805.16	transcript	ENST00000377453.9	protein_coding	2/3		chr13	76995382
chr13:76995537	T T	C C	27	a0002c0002t0002g0005 a0002c0002t0002g0006 a0002c0002t0002g0025 others(24): Show a0002c0002t0002g0005 a0002c0002t0002g0006 a0002c0002t0002g0025 a0002c0002t0002g0031 a0002c0002t0008g0017 a0002c0002t0008g0018 a0002c0002t0009g0019 a0002c0002t0009g0028 a0002c0002t0009g0030 a0002c0002t0038g0068 a0002c0002t0039g0067 a0002c0002t0040g0005 a0002c0002t0041g0005 a0002c0002t0042g0030 a0002c0003t0003g0004 a0002c0003t0003g0014 a0002c0003t0003g0036 a0002c0003t0003g0038 a0002c0003t0017g0004 a0002c0003t0034g0014 a0002c0003t0035g0004 a0002c0004t0006g0009 a0002c0004t0006g0012 a0002c0004t0006g0039 a0002c0004t0006g0040 a0002c0004t0043g0009 a0004c0008t0008g0032	110	HG00099.hp1 HG00099.hp2 HG00438.hp2 others(107): Show HG00099.hp1 HG00099.hp2 HG00438.hp2 HG00735.hp1 HG00741.hp1 HG01099.hp1 HG01109.hp2 HG01243.hp2 HG01255.hp2 HG01256.hp1 HG01257.hp1 HG01258.hp2 HG01346.hp2 HG01496.hp1 HG01884.hp1 HG01928.hp1 HG01934.hp2 HG01975.hp2 HG01981.hp1 HG01981.hp2 HG02015.hp1 HG02027.hp1 HG02055.hp1 HG02056.hp1 HG02056.hp2 HG02071.hp2 HG02129.hp2 HG02132.hp1 HG02148.hp1 HG02155.hp2 HG02273.hp1 HG02293.hp1 HG02451.hp1 HG02451.hp2 HG02486.hp1 HG02572.hp1 HG02615.hp1 HG02615.hp2 HG02622.hp1 HG02622.hp2 HG02630.hp1 HG02886.hp1 HG02896.hp2 HG02897.hp1 HG02922.hp1 HG02965.hp1 HG02970.hp1 HG02970.hp2 HG03130.hp2 HG03209.hp1 HG03225.hp1 HG03486.hp2 HG04115.hp2 HG04228.hp1 HG06807.hp2 NA18942.hp1 NA18943.hp2 NA18945.hp2 NA18946.hp2 NA18951.hp2 NA18952.hp1 NA18952.hp2 NA18954.hp2 NA18956.hp2 NA18957.hp1 NA18960.hp2 NA18961.hp2 NA18964.hp1 NA18966.hp1 NA18967.hp2 NA18969.hp2 NA18971.hp2 NA18972.hp1 NA18974.hp2 NA18977.hp2 NA18978.hp1 NA18981.hp2 NA18982.hp1 NA18982.hp2 NA18983.hp1 NA18983.hp2 NA18987.hp1 NA18989.hp1 NA18990.hp2 NA18995.hp2 NA18997.hp1 NA18997.hp2 NA18998.hp1 NA18998.hp2 NA18999.hp1 NA19002.hp2 NA19006.hp2 NA19007.hp2 NA19010.hp1 NA19056.hp1 NA19058.hp1 NA19059.hp2 NA19060.hp2 NA19066.hp1 NA19072.hp2 NA19075.hp1 NA19077.hp1 NA19079.hp1 NA19081.hp2 NA19083.hp1 NA19084.hp2 NA19088.hp2 NA19089.hp1 NA20905.hp2 NA21309.hp1	intron_variant	MODIFIER	c.339+309T>C c.339+309T>C	CLN5	ENSG00000102805.16	transcript	ENST00000377453.9	protein_coding	2/3		chr13	76995537
chr13:76995586	A A	G G	1	a0001c0001t0001g0055 a0001c0001t0001g0055	1	NA18965.hp1 NA18965.hp1	intron_variant	MODIFIER	c.340-316A>G c.340-316A>G	CLN5	ENSG00000102805.16	transcript	ENST00000377453.9	protein_coding	2/3		chr13	76995586
chr13:76995654	T T	C C	1	a0001c0001t0007g0011 a0001c0001t0007g0011	8	HG02559.hp2 HG02647.hp1 HG02818.hp1 others(5): Show HG02559.hp2 HG02647.hp1 HG02818.hp1 HG02896.hp1 HG02965.hp2 HG03471.hp1 HG03486.hp1 HG03540.hp2	intron_variant	MODIFIER	c.340-248T>C c.340-248T>C	CLN5	ENSG00000102805.16	transcript	ENST00000377453.9	protein_coding	2/3		chr13	76995654
chr13:76995717	C C	G G	3	a0002c0002t0008g0017 a0002c0002t0008g0018 a0004c0008t0008g0032 a0002c0002t0008g0017 a0002c0002t0008g0018 a0004c0008t0008g0032	7	HG01256.hp1 HG01258.hp2 HG02922.hp1 others(4): Show HG01256.hp1 HG01258.hp2 HG02922.hp1 HG02965.hp1 HG02970.hp1 HG03225.hp1 HG03486.hp2	intron_variant	MODIFIER	c.340-185C>G c.340-185C>G	CLN5	ENSG00000102805.16	transcript	ENST00000377453.9	protein_coding	2/3		chr13	76995717
chr13:76995766	G G	A A	98	a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0003 others(95): Show a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0003 a0001c0001t0001g0013 a0001c0001t0001g0015 a0001c0001t0001g0016 a0001c0001t0001g0020 a0001c0001t0001g0021 a0001c0001t0001g0022 a0001c0001t0001g0026 a0001c0001t0001g0027 a0001c0001t0001g0033 a0001c0001t0001g0035 a0001c0001t0001g0044 a0001c0001t0001g0046 a0001c0001t0001g0047 a0001c0001t0001g0048 a0001c0001t0001g0049 a0001c0001t0001g0050 a0001c0001t0001g0051 a0001c0001t0001g0052 a0001c0001t0001g0055 a0001c0001t0001g0056 a0001c0001t0001g0057 a0001c0001t0001g0059 a0001c0001t0005g0008 a0001c0001t0005g0041 a0001c0001t0005g0042 a0001c0001t0005g0043 a0001c0001t0007g0011 a0001c0001t0010g0001 a0001c0001t0010g0002 a0001c0001t0010g0003 a0001c0001t0010g0015 a0001c0001t0011g0001 a0001c0001t0013g0001 a0001c0001t0014g0024 a0001c0001t0016g0001 a0001c0001t0016g0020 a0001c0001t0019g0002 a0001c0001t0023g0029 a0001c0001t0024g0003 a0001c0001t0025g0060 a0001c0001t0026g0001 a0001c0001t0027g0045 a0001c0001t0028g0001 a0001c0001t0029g0003 a0001c0001t0030g0015 a0001c0001t0031g0029 a0001c0001t0032g0008 a0001c0001t0033g0058 a0001c0001t0037g0034 a0001c0005t0001g0002 a0001c0007t0001g0001 a0002c0002t0002g0005 a0002c0002t0002g0006 a0002c0002t0002g0025 a0002c0002t0002g0031 a0002c0002t0004g0007 a0002c0002t0004g0010 a0002c0002t0004g0061 a0002c0002t0004g0062 a0002c0002t0004g0063 a0002c0002t0004g0064 a0002c0002t0004g0065 a0002c0002t0008g0017 a0002c0002t0008g0018 a0002c0002t0009g0019 a0002c0002t0009g0028 a0002c0002t0009g0030 a0002c0002t0012g0007 a0002c0002t0012g0066 a0002c0002t0015g0023 a0002c0002t0018g0007 a0002c0002t0020g0007 a0002c0002t0021g0010 a0002c0002t0022g0053 a0002c0002t0036g0037 a0002c0002t0038g0068 a0002c0002t0039g0067 a0002c0002t0040g0005 a0002c0002t0041g0005 a0002c0002t0042g0030 a0002c0003t0003g0004 a0002c0003t0003g0014 a0002c0003t0003g0036 a0002c0003t0003g0038 a0002c0003t0017g0004 a0002c0003t0034g0014 a0002c0003t0035g0004 a0002c0004t0006g0009 a0002c0004t0006g0012 a0002c0004t0006g0039 a0002c0004t0006g0040 a0002c0004t0043g0009 a0003c0006t0001g0003 a0004c0008t0008g0032 a0005c0009t0001g0002	429	HG00099.hp1 HG00099.hp2 HG00280.hp1 others(426): Show HG00099.hp1 HG00099.hp2 HG00280.hp1 HG00280.hp2 HG00323.hp1 HG00323.hp2 HG00408.hp1 HG00408.hp2 HG00423.hp1 HG00423.hp2 HG00438.hp1 HG00438.hp2 HG00544.hp1 HG00544.hp2 HG00558.hp1 HG00558.hp2 HG00609.hp1 HG00609.hp2 HG00621.hp1 HG00621.hp2 HG00639.hp1 HG00639.hp2 HG00642.hp1 HG00642.hp2 HG00673.hp1 HG00673.hp2 HG00733.hp1 HG00733.hp2 HG00735.hp1 HG00735.hp2 HG00738.hp1 HG00738.hp2 HG00741.hp1 HG00741.hp2 HG01069.hp1 HG01069.hp2 HG01070.hp1 HG01070.hp2 HG01071.hp1 HG01071.hp2 HG01074.hp1 HG01074.hp2 HG01081.hp1 HG01081.hp2 HG01099.hp1 HG01099.hp2 HG01106.hp1 HG01106.hp2 HG01109.hp1 HG01109.hp2 HG01123.hp1 HG01123.hp2 HG01167.hp1 HG01167.hp2 HG01168.hp1 HG01168.hp2 HG01169.hp1 HG01169.hp2 HG01192.hp1 HG01192.hp2 HG01243.hp1 HG01243.hp2 HG01255.hp1 HG01255.hp2 HG01256.hp1 HG01256.hp2 HG01257.hp1 HG01257.hp2 HG01258.hp1 HG01258.hp2 HG01261.hp1 HG01261.hp2 HG01346.hp1 HG01346.hp2 HG01361.hp1 HG01361.hp2 HG01433.hp1 HG01433.hp2 HG01496.hp1 HG01496.hp2 HG01515.hp1 HG01515.hp2 HG01516.hp1 HG01516.hp2 HG01884.hp1 HG01884.hp2 HG01891.hp1 HG01891.hp2 HG01928.hp1 HG01928.hp2 HG01934.hp1 HG01934.hp2 HG01975.hp1 HG01975.hp2 HG01981.hp1 HG01981.hp2 HG02004.hp1 HG02004.hp2 HG02015.hp1 HG02015.hp2 HG02027.hp1 HG02027.hp2 HG02040.hp1 HG02040.hp2 HG02055.hp1 HG02055.hp2 HG02056.hp1 HG02056.hp2 HG02071.hp1 HG02071.hp2 HG02080.hp1 HG02080.hp2 HG02109.hp1 HG02109.hp2 HG02129.hp1 HG02129.hp2 HG02132.hp1 HG02132.hp2 HG02135.hp1 HG02135.hp2 HG02145.hp1 HG02145.hp2 HG02148.hp1 HG02148.hp2 HG02155.hp1 HG02155.hp2 HG02165.hp1 HG02165.hp2 HG02257.hp1 HG02257.hp2 HG02258.hp1 HG02258.hp2 HG02273.hp1 HG02273.hp2 HG02280.hp1 HG02280.hp2 HG02293.hp1 HG02293.hp2 HG02451.hp1 HG02451.hp2 HG02486.hp1 HG02486.hp2 HG02559.hp1 HG02559.hp2 HG02572.hp1 HG02572.hp2 HG02602.hp1 HG02602.hp2 HG02615.hp1 HG02615.hp2 HG02622.hp1 HG02622.hp2 HG02630.hp1 HG02630.hp2 HG02647.hp1 HG02647.hp2 HG02683.hp1 HG02683.hp2 HG02717.hp1 HG02717.hp2 HG02723.hp1 HG02723.hp2 HG02735.hp1 HG02735.hp2 HG02738.hp1 HG02738.hp2 HG02809.hp1 HG02809.hp2 HG02818.hp1 HG02818.hp2 HG02886.hp1 HG02886.hp2 HG02895.hp1 HG02895.hp2 HG02896.hp1 HG02896.hp2 HG02897.hp1 HG02897.hp2 HG02922.hp1 HG02922.hp2 HG02965.hp1 HG02965.hp2 HG02970.hp1 HG02970.hp2 HG02976.hp1 HG02976.hp2 HG03017.hp1 HG03017.hp2 HG03041.hp1 HG03041.hp2 HG03098.hp1 HG03098.hp2 HG03130.hp1 HG03130.hp2 HG03139.hp1 HG03139.hp2 HG03195.hp1 HG03195.hp2 HG03209.hp1 HG03209.hp2 HG03225.hp1 HG03225.hp2 HG03453.hp1 HG03453.hp2 HG03471.hp1 HG03471.hp2 HG03486.hp1 HG03486.hp2 HG03490.hp1 HG03490.hp2 HG03492.hp1 HG03492.hp2 HG03516.hp1 HG03516.hp2 HG03540.hp1 HG03540.hp2 HG03579.hp1 HG03579.hp2 HG03688.hp1 HG03688.hp2 HG03704.hp1 HG03704.hp2 HG03710.hp1 HG03710.hp2 HG03927.hp1 HG03927.hp2 HG03942.hp1 HG03942.hp2 HG04115.hp1 HG04115.hp2 HG04184.hp1 HG04184.hp2 HG04199.hp1 HG04199.hp2 HG04204.hp1 HG04204.hp2 HG04228.hp1 HG04228.hp2 HG06807.hp1 HG06807.hp2 NA18522.hp1 NA18522.hp2 NA18612.hp1 NA18612.hp2 NA18747.hp1 NA18747.hp2 NA18906.hp1 NA18906.hp2 NA18940.hp1 NA18940.hp2 NA18942.hp1 NA18942.hp2 NA18943.hp1 NA18943.hp2 NA18944.hp1 NA18944.hp2 NA18945.hp1 NA18945.hp2 NA18946.hp1 NA18946.hp2 NA18948.hp1 NA18948.hp2 NA18950.hp1 NA18950.hp2 NA18951.hp1 NA18951.hp2 NA18952.hp1 NA18952.hp2 NA18954.hp1 NA18954.hp2 NA18955.hp1 NA18955.hp2 NA18956.hp1 NA18956.hp2 NA18957.hp1 NA18957.hp2 NA18959.hp1 NA18959.hp2 NA18960.hp1 NA18960.hp2 NA18961.hp1 NA18961.hp2 NA18962.hp1 NA18962.hp2 NA18964.hp1 NA18964.hp2 NA18965.hp1 NA18965.hp2 NA18966.hp1 NA18966.hp2 NA18967.hp1 NA18967.hp2 NA18968.hp1 NA18968.hp2 NA18969.hp1 NA18969.hp2 NA18970.hp1 NA18970.hp2 NA18971.hp1 NA18971.hp2 NA18972.hp1 NA18972.hp2 NA18974.hp1 NA18974.hp2 NA18977.hp1 NA18977.hp2 NA18978.hp1 NA18978.hp2 NA18979.hp1 NA18979.hp2 NA18980.hp1 NA18980.hp2 NA18981.hp1 NA18981.hp2 NA18982.hp1 NA18982.hp2 NA18983.hp1 NA18983.hp2 NA18984.hp1 NA18984.hp2 NA18985.hp1 NA18985.hp2 NA18987.hp1 NA18987.hp2 NA18988.hp1 NA18988.hp2 NA18989.hp1 NA18989.hp2 NA18990.hp1 NA18990.hp2 NA18991.hp1 NA18991.hp2 NA18993.hp1 NA18993.hp2 NA18994.hp1 NA18994.hp2 NA18995.hp1 NA18995.hp2 NA18997.hp1 NA18997.hp2 NA18998.hp1 NA18998.hp2 NA18999.hp1 NA18999.hp2 NA19000.hp1 NA19000.hp2 NA19001.hp1 NA19001.hp2 NA19002.hp1 NA19002.hp2 NA19003.hp1 NA19003.hp2 NA19005.hp1 NA19005.hp2 NA19006.hp1 NA19006.hp2 NA19007.hp1 NA19007.hp2 NA19010.hp1 NA19010.hp2 NA19011.hp1 NA19011.hp2 NA19030.hp1 NA19030.hp2 NA19056.hp1 NA19056.hp2 NA19057.hp1 NA19057.hp2 NA19058.hp1 NA19058.hp2 NA19059.hp1 NA19059.hp2 NA19060.hp1 NA19060.hp2 NA19062.hp1 NA19062.hp2 NA19064.hp1 NA19064.hp2 NA19065.hp1 NA19065.hp2 NA19066.hp1 NA19066.hp2 NA19067.hp1 NA19067.hp2 NA19068.hp1 NA19068.hp2 NA19072.hp1 NA19072.hp2 NA19074.hp1 NA19074.hp2 NA19075.hp1 NA19075.hp2 NA19076.hp1 NA19076.hp2 NA19077.hp1 NA19077.hp2 NA19079.hp1 NA19079.hp2 NA19080.hp1 NA19080.hp2 NA19081.hp1 NA19081.hp2 NA19083.hp1 NA19083.hp2 NA19084.hp1 NA19084.hp2 NA19086.hp1 NA19086.hp2 NA19088.hp1 NA19088.hp2 NA19089.hp1 NA19089.hp2 NA19090.hp1 NA19090.hp2 NA19091.hp1 NA19091.hp2 NA19240.hp1 NA19240.hp2 NA20129.hp1 NA20129.hp2 NA20752.hp1 NA20752.hp2 NA20805.hp1 NA20805.hp2 NA20905.hp1 NA20905.hp2 NA21309.hp1 NA21309.hp2 homoSapiens_chm13v2.hp1	intron_variant	MODIFIER	c.340-136G>A c.340-136G>A	CLN5	ENSG00000102805.16	transcript	ENST00000377453.9	protein_coding	2/3		chr13	76995766
chr13:76995812	A A	T T	2	a0002c0002t0002g0006 a0002c0002t0038g0068 a0002c0002t0002g0006 a0002c0002t0038g0068	18	HG00438.hp2 HG01255.hp2 HG01934.hp2 others(15): Show HG00438.hp2 HG01255.hp2 HG01934.hp2 HG01975.hp2 HG01981.hp2 HG02148.hp1 HG02273.hp1 HG02293.hp1 NA18954.hp2 NA18964.hp1 NA18971.hp2 NA18974.hp2 NA18990.hp2 NA18998.hp2 NA18999.hp1 NA19007.hp2 NA19077.hp1 NA19083.hp1	intron_variant	MODIFIER	c.340-90A>T c.340-90A>T	CLN5	ENSG00000102805.16	transcript	ENST00000377453.9	protein_coding	2/3		chr13	76995812
chr13:76996217	T T	A A	7	a0002c0002t0002g0005 a0002c0002t0002g0006 a0002c0002t0002g0025 others(4): Show a0002c0002t0002g0005 a0002c0002t0002g0006 a0002c0002t0002g0025 a0002c0002t0002g0031 a0002c0002t0038g0068 a0002c0002t0040g0005 a0002c0002t0041g0005	45	HG00099.hp1 HG00438.hp2 HG01255.hp2 others(42): Show HG00099.hp1 HG00438.hp2 HG01255.hp2 HG01257.hp1 HG01934.hp2 HG01975.hp2 HG01981.hp2 HG02027.hp1 HG02056.hp2 HG02071.hp2 HG02129.hp2 HG02148.hp1 HG02155.hp2 HG02273.hp1 HG02293.hp1 HG04115.hp2 HG04228.hp1 NA18942.hp1 NA18952.hp1 NA18954.hp2 NA18957.hp1 NA18960.hp2 NA18961.hp2 NA18964.hp1 NA18967.hp2 NA18969.hp2 NA18971.hp2 NA18974.hp2 NA18982.hp1 NA18983.hp2 NA18990.hp2 NA18997.hp2 NA18998.hp2 NA18999.hp1 NA19006.hp2 NA19007.hp2 NA19066.hp1 NA19072.hp2 NA19077.hp1 NA19083.hp1 NA19084.hp2 NA19088.hp2 NA19089.hp1 NA20905.hp2 NA21309.hp1	intron_variant	MODIFIER	c.565+90T>A c.565+90T>A	CLN5	ENSG00000102805.16	transcript	ENST00000377453.9	protein_coding	3/3		chr13	76996217
chr13:76996374	T T	C C	1	a0002c0002t0004g0061 a0002c0002t0004g0061	1	HG02723.hp2 HG02723.hp2	intron_variant	MODIFIER	c.565+247T>C c.565+247T>C	CLN5	ENSG00000102805.16	transcript	ENST00000377453.9	protein_coding	3/3		chr13	76996374
chr13:76996390	G G	A A	1	a0001c0001t0027g0045 a0001c0001t0027g0045	1	HG02647.hp2 HG02647.hp2	intron_variant	MODIFIER	c.565+263G>A c.565+263G>A	CLN5	ENSG00000102805.16	transcript	ENST00000377453.9	protein_coding	3/3		chr13	76996390
chr13:76996448	CCT CCT	C C	7	a0002c0002t0002g0005 a0002c0002t0002g0006 a0002c0002t0002g0031 others(4): Show a0002c0002t0002g0005 a0002c0002t0002g0006 a0002c0002t0002g0031 a0002c0002t0038g0068 a0002c0002t0039g0067 a0002c0002t0040g0005 a0002c0002t0041g0005	43	HG00099.hp1 HG00438.hp2 HG01255.hp2 others(40): Show HG00099.hp1 HG00438.hp2 HG01255.hp2 HG01257.hp1 HG01934.hp2 HG01975.hp2 HG01981.hp2 HG02027.hp1 HG02056.hp2 HG02148.hp1 HG02155.hp2 HG02273.hp1 HG02293.hp1 HG02630.hp1 HG04115.hp2 HG04228.hp1 NA18942.hp1 NA18952.hp1 NA18954.hp2 NA18957.hp1 NA18960.hp2 NA18961.hp2 NA18964.hp1 NA18967.hp2 NA18969.hp2 NA18971.hp2 NA18974.hp2 NA18982.hp1 NA18983.hp2 NA18990.hp2 NA18997.hp2 NA18998.hp2 NA18999.hp1 NA19006.hp2 NA19007.hp2 NA19066.hp1 NA19077.hp1 NA19083.hp1 NA19084.hp2 NA19088.hp2 NA19089.hp1 NA20905.hp2 NA21309.hp1	intron_variant	MODIFIER	c.565+325_565+326del others(2): Show c.565+325_565+326delTC	CLN5	ENSG00000102805.16	transcript	ENST00000377453.9	protein_coding	3/3	INFO_REALIGN_3_PRIME	chr13	76996448
chr13:76996455	G G	A A	1	a0001c0001t0001g0046 a0001c0001t0001g0046	1	HG02155.hp1 HG02155.hp1	intron_variant	MODIFIER	c.565+328G>A c.565+328G>A	CLN5	ENSG00000102805.16	transcript	ENST00000377453.9	protein_coding	3/3		chr13	76996455
chr13:76996496	C C	T T	11	a0001c0001t0001g0003 a0001c0001t0001g0013 a0001c0001t0001g0022 others(8): Show a0001c0001t0001g0003 a0001c0001t0001g0013 a0001c0001t0001g0022 a0001c0001t0001g0027 a0001c0001t0001g0052 a0001c0001t0001g0056 a0001c0001t0010g0003 a0001c0001t0024g0003 a0001c0001t0029g0003 a0002c0002t0022g0053 a0003c0006t0001g0003	48	HG00323.hp2 HG00408.hp1 HG00558.hp1 others(45): Show HG00323.hp2 HG00408.hp1 HG00558.hp1 HG00621.hp1 HG00639.hp2 HG00733.hp2 HG01070.hp2 HG01071.hp1 HG01074.hp2 HG01123.hp1 HG01192.hp2 HG01261.hp1 HG01346.hp1 HG01496.hp2 HG01928.hp2 HG01934.hp1 HG01975.hp1 HG02055.hp2 HG02080.hp1 HG02129.hp1 HG02148.hp2 HG02257.hp1 HG02258.hp1 HG02273.hp2 HG02280.hp2 HG02559.hp1 HG02683.hp2 HG02738.hp2 HG02809.hp1 HG02976.hp2 HG03139.hp2 NA18944.hp1 NA18946.hp1 NA18950.hp1 NA18959.hp2 NA18964.hp2 NA18971.hp1 NA18972.hp2 NA18980.hp2 NA18984.hp1 NA18994.hp2 NA19003.hp2 NA19005.hp1 NA19011.hp1 NA19064.hp1 NA19065.hp2 NA19074.hp1 NA19083.hp2	intron_variant	MODIFIER	c.565+369C>T c.565+369C>T	CLN5	ENSG00000102805.16	transcript	ENST00000377453.9	protein_coding	3/3		chr13	76996496
chr13:76996512	C C	T T	13	a0002c0002t0002g0005 a0002c0002t0002g0006 a0002c0002t0002g0025 others(10): Show a0002c0002t0002g0005 a0002c0002t0002g0006 a0002c0002t0002g0025 a0002c0002t0002g0031 a0002c0002t0038g0068 a0002c0002t0039g0067 a0002c0002t0040g0005 a0002c0002t0041g0005 a0002c0004t0006g0009 a0002c0004t0006g0012 a0002c0004t0006g0039 a0002c0004t0006g0040 a0002c0004t0043g0009	63	HG00099.hp1 HG00438.hp2 HG00735.hp1 others(60): Show HG00099.hp1 HG00438.hp2 HG00735.hp1 HG00741.hp1 HG01099.hp1 HG01109.hp2 HG01243.hp2 HG01255.hp2 HG01257.hp1 HG01496.hp1 HG01934.hp2 HG01975.hp2 HG01981.hp2 HG02027.hp1 HG02055.hp1 HG02056.hp2 HG02071.hp2 HG02129.hp2 HG02148.hp1 HG02155.hp2 HG02273.hp1 HG02293.hp1 HG02451.hp2 HG02486.hp1 HG02615.hp2 HG02622.hp1 HG02630.hp1 HG02886.hp1 HG02896.hp2 HG02897.hp1 HG03130.hp2 HG03209.hp1 HG04115.hp2 HG04228.hp1 HG06807.hp2 NA18942.hp1 NA18952.hp1 NA18954.hp2 NA18957.hp1 NA18960.hp2 NA18961.hp2 NA18964.hp1 NA18967.hp2 NA18969.hp2 NA18971.hp2 NA18974.hp2 NA18982.hp1 NA18983.hp2 NA18990.hp2 NA18997.hp2 NA18998.hp2 NA18999.hp1 NA19006.hp2 NA19007.hp2 NA19066.hp1 NA19072.hp2 NA19077.hp1 NA19083.hp1 NA19084.hp2 NA19088.hp2 NA19089.hp1 NA20905.hp2 NA21309.hp1	intron_variant	MODIFIER	c.565+385C>T c.565+385C>T	CLN5	ENSG00000102805.16	transcript	ENST00000377453.9	protein_coding	3/3		chr13	76996512
chr13:76996542	A A	G G	8	a0002c0002t0002g0005 a0002c0002t0002g0006 a0002c0002t0002g0025 others(5): Show a0002c0002t0002g0005 a0002c0002t0002g0006 a0002c0002t0002g0025 a0002c0002t0002g0031 a0002c0002t0038g0068 a0002c0002t0039g0067 a0002c0002t0040g0005 a0002c0002t0041g0005	46	HG00099.hp1 HG00438.hp2 HG01255.hp2 others(43): Show HG00099.hp1 HG00438.hp2 HG01255.hp2 HG01257.hp1 HG01934.hp2 HG01975.hp2 HG01981.hp2 HG02027.hp1 HG02056.hp2 HG02071.hp2 HG02129.hp2 HG02148.hp1 HG02155.hp2 HG02273.hp1 HG02293.hp1 HG02630.hp1 HG04115.hp2 HG04228.hp1 NA18942.hp1 NA18952.hp1 NA18954.hp2 NA18957.hp1 NA18960.hp2 NA18961.hp2 NA18964.hp1 NA18967.hp2 NA18969.hp2 NA18971.hp2 NA18974.hp2 NA18982.hp1 NA18983.hp2 NA18990.hp2 NA18997.hp2 NA18998.hp2 NA18999.hp1 NA19006.hp2 NA19007.hp2 NA19066.hp1 NA19072.hp2 NA19077.hp1 NA19083.hp1 NA19084.hp2 NA19088.hp2 NA19089.hp1 NA20905.hp2 NA21309.hp1	intron_variant	MODIFIER	c.565+415A>G c.565+415A>G	CLN5	ENSG00000102805.16	transcript	ENST00000377453.9	protein_coding	3/3		chr13	76996542
chr13:76996654	T T	G G	9	a0002c0002t0009g0019 a0002c0002t0009g0028 a0002c0002t0009g0030 others(6): Show a0002c0002t0009g0019 a0002c0002t0009g0028 a0002c0002t0009g0030 a0002c0002t0042g0030 a0002c0004t0006g0009 a0002c0004t0006g0012 a0002c0004t0006g0039 a0002c0004t0006g0040 a0002c0004t0043g0009	24	HG00735.hp1 HG00741.hp1 HG01099.hp1 others(21): Show HG00735.hp1 HG00741.hp1 HG01099.hp1 HG01109.hp2 HG01243.hp2 HG01496.hp1 HG01884.hp1 HG01981.hp1 HG02055.hp1 HG02451.hp1 HG02451.hp2 HG02486.hp1 HG02572.hp1 HG02615.hp1 HG02615.hp2 HG02622.hp1 HG02622.hp2 HG02886.hp1 HG02896.hp2 HG02897.hp1 HG02970.hp2 HG03130.hp2 HG03209.hp1 HG06807.hp2	intron_variant	MODIFIER	c.565+527T>G c.565+527T>G	CLN5	ENSG00000102805.16	transcript	ENST00000377453.9	protein_coding	3/3		chr13	76996654
chr13:76996665	T T	C C	8	a0002c0002t0002g0005 a0002c0002t0002g0006 a0002c0002t0002g0025 others(5): Show a0002c0002t0002g0005 a0002c0002t0002g0006 a0002c0002t0002g0025 a0002c0002t0002g0031 a0002c0002t0038g0068 a0002c0002t0039g0067 a0002c0002t0040g0005 a0002c0002t0041g0005	46	HG00099.hp1 HG00438.hp2 HG01255.hp2 others(43): Show HG00099.hp1 HG00438.hp2 HG01255.hp2 HG01257.hp1 HG01934.hp2 HG01975.hp2 HG01981.hp2 HG02027.hp1 HG02056.hp2 HG02071.hp2 HG02129.hp2 HG02148.hp1 HG02155.hp2 HG02273.hp1 HG02293.hp1 HG02630.hp1 HG04115.hp2 HG04228.hp1 NA18942.hp1 NA18952.hp1 NA18954.hp2 NA18957.hp1 NA18960.hp2 NA18961.hp2 NA18964.hp1 NA18967.hp2 NA18969.hp2 NA18971.hp2 NA18974.hp2 NA18982.hp1 NA18983.hp2 NA18990.hp2 NA18997.hp2 NA18998.hp2 NA18999.hp1 NA19006.hp2 NA19007.hp2 NA19066.hp1 NA19072.hp2 NA19077.hp1 NA19083.hp1 NA19084.hp2 NA19088.hp2 NA19089.hp1 NA20905.hp2 NA21309.hp1	intron_variant	MODIFIER	c.565+538T>C c.565+538T>C	CLN5	ENSG00000102805.16	transcript	ENST00000377453.9	protein_coding	3/3		chr13	76996665
chr13:76997143	G G	T T	75	a0001c0001t0001g0002 a0001c0001t0001g0003 a0001c0001t0001g0013 others(72): Show a0001c0001t0001g0002 a0001c0001t0001g0003 a0001c0001t0001g0013 a0001c0001t0001g0015 a0001c0001t0001g0021 a0001c0001t0001g0022 a0001c0001t0001g0027 a0001c0001t0001g0033 a0001c0001t0001g0044 a0001c0001t0001g0049 a0001c0001t0001g0050 a0001c0001t0001g0051 a0001c0001t0001g0052 a0001c0001t0001g0056 a0001c0001t0001g0057 a0001c0001t0005g0008 a0001c0001t0005g0041 a0001c0001t0005g0042 a0001c0001t0005g0043 a0001c0001t0007g0011 a0001c0001t0010g0002 a0001c0001t0010g0003 a0001c0001t0010g0015 a0001c0001t0019g0002 a0001c0001t0023g0029 a0001c0001t0024g0003 a0001c0001t0025g0060 a0001c0001t0029g0003 a0001c0001t0030g0015 a0001c0001t0031g0029 a0001c0001t0032g0008 a0001c0001t0037g0034 a0001c0005t0001g0002 a0002c0002t0002g0005 a0002c0002t0002g0006 a0002c0002t0002g0025 a0002c0002t0002g0031 a0002c0002t0004g0007 a0002c0002t0004g0010 a0002c0002t0004g0061 a0002c0002t0004g0062 a0002c0002t0004g0063 a0002c0002t0004g0064 a0002c0002t0004g0065 a0002c0002t0008g0017 a0002c0002t0008g0018 a0002c0002t0009g0019 a0002c0002t0009g0028 a0002c0002t0009g0030 a0002c0002t0012g0007 a0002c0002t0012g0066 a0002c0002t0015g0023 a0002c0002t0018g0007 a0002c0002t0020g0007 a0002c0002t0021g0010 a0002c0002t0022g0053 a0002c0002t0036g0037 a0002c0002t0038g0068 a0002c0002t0039g0067 a0002c0002t0040g0005 a0002c0002t0041g0005 a0002c0002t0042g0030 a0002c0003t0003g0004 a0002c0003t0003g0036 a0002c0003t0003g0038 a0002c0003t0017g0004 a0002c0003t0035g0004 a0002c0004t0006g0009 a0002c0004t0006g0012 a0002c0004t0006g0039 a0002c0004t0006g0040 a0002c0004t0043g0009 a0003c0006t0001g0003 a0004c0008t0008g0032 a0005c0009t0001g0002	315	HG00099.hp1 HG00099.hp2 HG00280.hp1 others(312): Show HG00099.hp1 HG00099.hp2 HG00280.hp1 HG00323.hp1 HG00323.hp2 HG00408.hp1 HG00438.hp2 HG00544.hp1 HG00558.hp1 HG00558.hp2 HG00609.hp2 HG00621.hp1 HG00621.hp2 HG00639.hp1 HG00639.hp2 HG00642.hp1 HG00673.hp2 HG00733.hp2 HG00735.hp1 HG00735.hp2 HG00738.hp2 HG00741.hp1 HG00741.hp2 HG01069.hp2 HG01070.hp1 HG01070.hp2 HG01071.hp1 HG01071.hp2 HG01074.hp1 HG01074.hp2 HG01081.hp1 HG01081.hp2 HG01099.hp1 HG01106.hp2 HG01109.hp1 HG01109.hp2 HG01123.hp1 HG01123.hp2 HG01167.hp2 HG01168.hp2 HG01169.hp1 HG01192.hp1 HG01192.hp2 HG01243.hp1 HG01243.hp2 HG01255.hp1 HG01255.hp2 HG01256.hp1 HG01257.hp1 HG01257.hp2 HG01258.hp1 HG01258.hp2 HG01261.hp1 HG01261.hp2 HG01346.hp1 HG01346.hp2 HG01361.hp1 HG01361.hp2 HG01433.hp1 HG01433.hp2 HG01496.hp1 HG01496.hp2 HG01515.hp2 HG01516.hp1 HG01884.hp1 HG01884.hp2 HG01891.hp2 HG01928.hp1 HG01928.hp2 HG01934.hp1 HG01934.hp2 HG01975.hp1 HG01975.hp2 HG01981.hp1 HG01981.hp2 HG02004.hp1 HG02004.hp2 HG02015.hp1 HG02027.hp1 HG02040.hp1 HG02055.hp1 HG02055.hp2 HG02056.hp1 HG02056.hp2 HG02071.hp2 HG02080.hp1 HG02080.hp2 HG02109.hp1 HG02129.hp1 HG02129.hp2 HG02132.hp1 HG02132.hp2 HG02145.hp1 HG02145.hp2 HG02148.hp1 HG02148.hp2 HG02155.hp2 HG02165.hp1 HG02257.hp1 HG02257.hp2 HG02258.hp1 HG02258.hp2 HG02273.hp1 HG02273.hp2 HG02280.hp1 HG02280.hp2 HG02293.hp1 HG02451.hp1 HG02451.hp2 HG02486.hp1 HG02486.hp2 HG02559.hp1 HG02559.hp2 HG02572.hp1 HG02602.hp2 HG02615.hp1 HG02615.hp2 HG02622.hp1 HG02622.hp2 HG02630.hp1 HG02630.hp2 HG02647.hp1 HG02683.hp1 HG02683.hp2 HG02717.hp1 HG02717.hp2 HG02723.hp1 HG02723.hp2 HG02735.hp1 HG02735.hp2 HG02738.hp2 HG02809.hp1 HG02809.hp2 HG02818.hp1 HG02818.hp2 HG02886.hp1 HG02886.hp2 HG02895.hp1 HG02896.hp1 HG02896.hp2 HG02897.hp1 HG02922.hp1 HG02922.hp2 HG02965.hp1 HG02965.hp2 HG02970.hp1 HG02970.hp2 HG02976.hp1 HG02976.hp2 HG03017.hp1 HG03041.hp1 HG03041.hp2 HG03098.hp1 HG03130.hp1 HG03130.hp2 HG03139.hp1 HG03139.hp2 HG03195.hp1 HG03195.hp2 HG03209.hp1 HG03209.hp2 HG03225.hp1 HG03225.hp2 HG03453.hp1 HG03453.hp2 HG03471.hp1 HG03471.hp2 HG03486.hp1 HG03486.hp2 HG03490.hp2 HG03492.hp2 HG03516.hp1 HG03516.hp2 HG03540.hp1 HG03540.hp2 HG03579.hp1 HG03579.hp2 HG03688.hp1 HG03704.hp2 HG03927.hp2 HG03942.hp1 HG03942.hp2 HG04115.hp2 HG04184.hp2 HG04199.hp2 HG04204.hp2 HG04228.hp1 HG04228.hp2 HG06807.hp1 HG06807.hp2 NA18522.hp1 NA18612.hp2 NA18747.hp2 NA18906.hp1 NA18906.hp2 NA18940.hp1 NA18942.hp1 NA18942.hp2 NA18943.hp1 NA18944.hp1 NA18945.hp1 NA18946.hp1 NA18946.hp2 NA18948.hp2 NA18950.hp1 NA18952.hp1 NA18952.hp2 NA18954.hp2 NA18955.hp1 NA18956.hp1 NA18956.hp2 NA18957.hp1 NA18957.hp2 NA18959.hp1 NA18959.hp2 NA18960.hp2 NA18961.hp1 NA18961.hp2 NA18962.hp1 NA18964.hp1 NA18964.hp2 NA18966.hp1 NA18966.hp2 NA18967.hp2 NA18968.hp2 NA18969.hp2 NA18971.hp1 NA18971.hp2 NA18972.hp2 NA18974.hp1 NA18974.hp2 NA18977.hp2 NA18978.hp1 NA18979.hp1 NA18980.hp1 NA18980.hp2 NA18981.hp2 NA18982.hp1 NA18982.hp2 NA18983.hp1 NA18983.hp2 NA18984.hp1 NA18985.hp2 NA18987.hp1 NA18987.hp2 NA18988.hp1 NA18989.hp1 NA18989.hp2 NA18990.hp2 NA18994.hp2 NA18995.hp1 NA18995.hp2 NA18997.hp1 NA18997.hp2 NA18998.hp1 NA18998.hp2 NA18999.hp1 NA19000.hp2 NA19001.hp1 NA19002.hp1 NA19002.hp2 NA19003.hp2 NA19005.hp1 NA19005.hp2 NA19006.hp2 NA19007.hp2 NA19010.hp1 NA19011.hp1 NA19011.hp2 NA19030.hp2 NA19056.hp1 NA19056.hp2 NA19057.hp1 NA19058.hp1 NA19058.hp2 NA19059.hp1 NA19059.hp2 NA19060.hp2 NA19062.hp2 NA19064.hp1 NA19065.hp2 NA19066.hp1 NA19067.hp1 NA19068.hp1 NA19068.hp2 NA19072.hp2 NA19074.hp1 NA19075.hp1 NA19077.hp1 NA19079.hp1 NA19080.hp2 NA19081.hp1 NA19081.hp2 NA19083.hp1 NA19083.hp2 NA19084.hp1 NA19084.hp2 NA19088.hp1 NA19088.hp2 NA19089.hp1 NA19089.hp2 NA19090.hp1 NA19091.hp1 NA19240.hp1 NA19240.hp2 NA20129.hp2 NA20752.hp1 NA20752.hp2 NA20805.hp1 NA20805.hp2 NA20905.hp1 NA20905.hp2 NA21309.hp1 NA21309.hp2 homoSapiens_chm13v2.hp1	intron_variant	MODIFIER	c.565+1016G>T c.565+1016G>T	CLN5	ENSG00000102805.16	transcript	ENST00000377453.9	protein_coding	3/3		chr13	76997143
chr13:76997149	GTTGT GTTGT	G G	17	a0002c0002t0004g0007 a0002c0002t0004g0010 a0002c0002t0004g0061 others(14): Show a0002c0002t0004g0007 a0002c0002t0004g0010 a0002c0002t0004g0061 a0002c0002t0004g0062 a0002c0002t0004g0063 a0002c0002t0004g0064 a0002c0002t0004g0065 a0002c0002t0008g0017 a0002c0002t0008g0018 a0002c0002t0012g0007 a0002c0002t0012g0066 a0002c0002t0015g0023 a0002c0002t0018g0007 a0002c0002t0020g0007 a0002c0002t0021g0010 a0002c0002t0036g0037 a0004c0008t0008g0032	41	HG00621.hp2 HG01069.hp2 HG01071.hp2 others(38): Show HG00621.hp2 HG01069.hp2 HG01071.hp2 HG01256.hp1 HG01258.hp2 HG01891.hp2 HG02132.hp2 HG02257.hp2 HG02280.hp1 HG02486.hp2 HG02630.hp2 HG02717.hp1 HG02723.hp1 HG02723.hp2 HG02886.hp2 HG02895.hp1 HG02922.hp1 HG02965.hp1 HG02970.hp1 HG02976.hp1 HG03195.hp2 HG03209.hp2 HG03225.hp1 HG03453.hp2 HG03486.hp2 HG03540.hp1 HG03579.hp1 HG03579.hp2 HG06807.hp1 NA18612.hp2 NA18906.hp2 NA18940.hp1 NA18995.hp1 NA19005.hp2 NA19059.hp1 NA19068.hp2 NA19089.hp2 NA19090.hp1 NA19240.hp1 NA19240.hp2 NA20129.hp2	intron_variant	MODIFIER	c.565+1034_565+1037d others(6): Show c.565+1034_565+1037delTTTG	CLN5	ENSG00000102805.16	transcript	ENST00000377453.9	protein_coding	3/3	INFO_REALIGN_3_PRIME	chr13	76997149
chr13:76997201	C C	T T	1	a0001c0001t0001g0022 a0001c0001t0001g0022	3	HG00408.hp1 HG02080.hp1 NA18964.hp2 HG00408.hp1 HG02080.hp1 NA18964.hp2	intron_variant	MODIFIER	c.565+1074C>T c.565+1074C>T	CLN5	ENSG00000102805.16	transcript	ENST00000377453.9	protein_coding	3/3		chr13	76997201
chr13:76997209	C C	T T	17	a0002c0002t0002g0005 a0002c0002t0002g0006 a0002c0002t0002g0025 others(14): Show a0002c0002t0002g0005 a0002c0002t0002g0006 a0002c0002t0002g0025 a0002c0002t0002g0031 a0002c0002t0009g0019 a0002c0002t0009g0028 a0002c0002t0009g0030 a0002c0002t0038g0068 a0002c0002t0039g0067 a0002c0002t0040g0005 a0002c0002t0041g0005 a0002c0002t0042g0030 a0002c0004t0006g0009 a0002c0004t0006g0012 a0002c0004t0006g0039 a0002c0004t0006g0040 a0002c0004t0043g0009	70	HG00099.hp1 HG00438.hp2 HG00735.hp1 others(67): Show HG00099.hp1 HG00438.hp2 HG00735.hp1 HG00741.hp1 HG01099.hp1 HG01109.hp2 HG01243.hp2 HG01255.hp2 HG01257.hp1 HG01496.hp1 HG01884.hp1 HG01934.hp2 HG01975.hp2 HG01981.hp1 HG01981.hp2 HG02027.hp1 HG02055.hp1 HG02056.hp2 HG02071.hp2 HG02129.hp2 HG02148.hp1 HG02155.hp2 HG02273.hp1 HG02293.hp1 HG02451.hp1 HG02451.hp2 HG02486.hp1 HG02572.hp1 HG02615.hp1 HG02615.hp2 HG02622.hp1 HG02622.hp2 HG02630.hp1 HG02886.hp1 HG02896.hp2 HG02897.hp1 HG02970.hp2 HG03130.hp2 HG03209.hp1 HG04115.hp2 HG04228.hp1 HG06807.hp2 NA18942.hp1 NA18952.hp1 NA18954.hp2 NA18957.hp1 NA18960.hp2 NA18961.hp2 NA18964.hp1 NA18967.hp2 NA18969.hp2 NA18971.hp2 NA18974.hp2 NA18982.hp1 NA18983.hp2 NA18990.hp2 NA18997.hp2 NA18998.hp2 NA18999.hp1 NA19006.hp2 NA19007.hp2 NA19066.hp1 NA19072.hp2 NA19077.hp1 NA19083.hp1 NA19084.hp2 NA19088.hp2 NA19089.hp1 NA20905.hp2 NA21309.hp1	intron_variant	MODIFIER	c.565+1082C>T c.565+1082C>T	CLN5	ENSG00000102805.16	transcript	ENST00000377453.9	protein_coding	3/3		chr13	76997209
chr13:76997214	T T	A A	8	a0002c0002t0002g0005 a0002c0002t0002g0006 a0002c0002t0002g0025 others(5): Show a0002c0002t0002g0005 a0002c0002t0002g0006 a0002c0002t0002g0025 a0002c0002t0002g0031 a0002c0002t0038g0068 a0002c0002t0039g0067 a0002c0002t0040g0005 a0002c0002t0041g0005	46	HG00099.hp1 HG00438.hp2 HG01255.hp2 others(43): Show HG00099.hp1 HG00438.hp2 HG01255.hp2 HG01257.hp1 HG01934.hp2 HG01975.hp2 HG01981.hp2 HG02027.hp1 HG02056.hp2 HG02071.hp2 HG02129.hp2 HG02148.hp1 HG02155.hp2 HG02273.hp1 HG02293.hp1 HG02630.hp1 HG04115.hp2 HG04228.hp1 NA18942.hp1 NA18952.hp1 NA18954.hp2 NA18957.hp1 NA18960.hp2 NA18961.hp2 NA18964.hp1 NA18967.hp2 NA18969.hp2 NA18971.hp2 NA18974.hp2 NA18982.hp1 NA18983.hp2 NA18990.hp2 NA18997.hp2 NA18998.hp2 NA18999.hp1 NA19006.hp2 NA19007.hp2 NA19066.hp1 NA19072.hp2 NA19077.hp1 NA19083.hp1 NA19084.hp2 NA19088.hp2 NA19089.hp1 NA20905.hp2 NA21309.hp1	intron_variant	MODIFIER	c.565+1087T>A c.565+1087T>A	CLN5	ENSG00000102805.16	transcript	ENST00000377453.9	protein_coding	3/3		chr13	76997214
chr13:76997241	G G	A A	1	a0001c0001t0001g0046 a0001c0001t0001g0046	1	HG02155.hp1 HG02155.hp1	intron_variant	MODIFIER	c.565+1114G>A c.565+1114G>A	CLN5	ENSG00000102805.16	transcript	ENST00000377453.9	protein_coding	3/3		chr13	76997241
chr13:76997343	C C	T T	7	a0002c0002t0004g0007 a0002c0002t0004g0061 a0002c0002t0004g0065 others(4): Show a0002c0002t0004g0007 a0002c0002t0004g0061 a0002c0002t0004g0065 a0002c0002t0012g0007 a0002c0002t0012g0066 a0002c0002t0018g0007 a0002c0002t0020g0007	18	HG02257.hp2 HG02280.hp1 HG02486.hp2 others(15): Show HG02257.hp2 HG02280.hp1 HG02486.hp2 HG02630.hp2 HG02717.hp1 HG02723.hp1 HG02723.hp2 HG02895.hp1 HG03195.hp2 HG03209.hp2 HG03453.hp2 HG03540.hp1 HG03579.hp1 HG03579.hp2 HG06807.hp1 NA18906.hp2 NA19240.hp1 NA20129.hp2	intron_variant	MODIFIER	c.565+1216C>T c.565+1216C>T	CLN5	ENSG00000102805.16	transcript	ENST00000377453.9	protein_coding	3/3		chr13	76997343
chr13:76997356	A A	AG AG	17	a0002c0002t0002g0005 a0002c0002t0002g0006 a0002c0002t0002g0025 others(14): Show a0002c0002t0002g0005 a0002c0002t0002g0006 a0002c0002t0002g0025 a0002c0002t0002g0031 a0002c0002t0009g0019 a0002c0002t0009g0028 a0002c0002t0009g0030 a0002c0002t0038g0068 a0002c0002t0039g0067 a0002c0002t0040g0005 a0002c0002t0041g0005 a0002c0002t0042g0030 a0002c0004t0006g0009 a0002c0004t0006g0012 a0002c0004t0006g0039 a0002c0004t0006g0040 a0002c0004t0043g0009	70	HG00099.hp1 HG00438.hp2 HG00735.hp1 others(67): Show HG00099.hp1 HG00438.hp2 HG00735.hp1 HG00741.hp1 HG01099.hp1 HG01109.hp2 HG01243.hp2 HG01255.hp2 HG01257.hp1 HG01496.hp1 HG01884.hp1 HG01934.hp2 HG01975.hp2 HG01981.hp1 HG01981.hp2 HG02027.hp1 HG02055.hp1 HG02056.hp2 HG02071.hp2 HG02129.hp2 HG02148.hp1 HG02155.hp2 HG02273.hp1 HG02293.hp1 HG02451.hp1 HG02451.hp2 HG02486.hp1 HG02572.hp1 HG02615.hp1 HG02615.hp2 HG02622.hp1 HG02622.hp2 HG02630.hp1 HG02886.hp1 HG02896.hp2 HG02897.hp1 HG02970.hp2 HG03130.hp2 HG03209.hp1 HG04115.hp2 HG04228.hp1 HG06807.hp2 NA18942.hp1 NA18952.hp1 NA18954.hp2 NA18957.hp1 NA18960.hp2 NA18961.hp2 NA18964.hp1 NA18967.hp2 NA18969.hp2 NA18971.hp2 NA18974.hp2 NA18982.hp1 NA18983.hp2 NA18990.hp2 NA18997.hp2 NA18998.hp2 NA18999.hp1 NA19006.hp2 NA19007.hp2 NA19066.hp1 NA19072.hp2 NA19077.hp1 NA19083.hp1 NA19084.hp2 NA19088.hp2 NA19089.hp1 NA20905.hp2 NA21309.hp1	intron_variant	MODIFIER	c.565+1230dupG c.565+1230dupG	CLN5	ENSG00000102805.16	transcript	ENST00000377453.9	protein_coding	3/3	INFO_REALIGN_3_PRIME	chr13	76997356
chr13:76997368	A A	G G	17	a0002c0002t0002g0005 a0002c0002t0002g0006 a0002c0002t0002g0025 others(14): Show a0002c0002t0002g0005 a0002c0002t0002g0006 a0002c0002t0002g0025 a0002c0002t0002g0031 a0002c0002t0009g0019 a0002c0002t0009g0028 a0002c0002t0009g0030 a0002c0002t0038g0068 a0002c0002t0039g0067 a0002c0002t0040g0005 a0002c0002t0041g0005 a0002c0002t0042g0030 a0002c0004t0006g0009 a0002c0004t0006g0012 a0002c0004t0006g0039 a0002c0004t0006g0040 a0002c0004t0043g0009	70	HG00099.hp1 HG00438.hp2 HG00735.hp1 others(67): Show HG00099.hp1 HG00438.hp2 HG00735.hp1 HG00741.hp1 HG01099.hp1 HG01109.hp2 HG01243.hp2 HG01255.hp2 HG01257.hp1 HG01496.hp1 HG01884.hp1 HG01934.hp2 HG01975.hp2 HG01981.hp1 HG01981.hp2 HG02027.hp1 HG02055.hp1 HG02056.hp2 HG02071.hp2 HG02129.hp2 HG02148.hp1 HG02155.hp2 HG02273.hp1 HG02293.hp1 HG02451.hp1 HG02451.hp2 HG02486.hp1 HG02572.hp1 HG02615.hp1 HG02615.hp2 HG02622.hp1 HG02622.hp2 HG02630.hp1 HG02886.hp1 HG02896.hp2 HG02897.hp1 HG02970.hp2 HG03130.hp2 HG03209.hp1 HG04115.hp2 HG04228.hp1 HG06807.hp2 NA18942.hp1 NA18952.hp1 NA18954.hp2 NA18957.hp1 NA18960.hp2 NA18961.hp2 NA18964.hp1 NA18967.hp2 NA18969.hp2 NA18971.hp2 NA18974.hp2 NA18982.hp1 NA18983.hp2 NA18990.hp2 NA18997.hp2 NA18998.hp2 NA18999.hp1 NA19006.hp2 NA19007.hp2 NA19066.hp1 NA19072.hp2 NA19077.hp1 NA19083.hp1 NA19084.hp2 NA19088.hp2 NA19089.hp1 NA20905.hp2 NA21309.hp1	intron_variant	MODIFIER	c.565+1241A>G c.565+1241A>G	CLN5	ENSG00000102805.16	transcript	ENST00000377453.9	protein_coding	3/3		chr13	76997368
chr13:76997397	T T	C C	17	a0002c0002t0002g0005 a0002c0002t0002g0006 a0002c0002t0002g0025 others(14): Show a0002c0002t0002g0005 a0002c0002t0002g0006 a0002c0002t0002g0025 a0002c0002t0002g0031 a0002c0002t0009g0019 a0002c0002t0009g0028 a0002c0002t0009g0030 a0002c0002t0038g0068 a0002c0002t0039g0067 a0002c0002t0040g0005 a0002c0002t0041g0005 a0002c0002t0042g0030 a0002c0004t0006g0009 a0002c0004t0006g0012 a0002c0004t0006g0039 a0002c0004t0006g0040 a0002c0004t0043g0009	70	HG00099.hp1 HG00438.hp2 HG00735.hp1 others(67): Show HG00099.hp1 HG00438.hp2 HG00735.hp1 HG00741.hp1 HG01099.hp1 HG01109.hp2 HG01243.hp2 HG01255.hp2 HG01257.hp1 HG01496.hp1 HG01884.hp1 HG01934.hp2 HG01975.hp2 HG01981.hp1 HG01981.hp2 HG02027.hp1 HG02055.hp1 HG02056.hp2 HG02071.hp2 HG02129.hp2 HG02148.hp1 HG02155.hp2 HG02273.hp1 HG02293.hp1 HG02451.hp1 HG02451.hp2 HG02486.hp1 HG02572.hp1 HG02615.hp1 HG02615.hp2 HG02622.hp1 HG02622.hp2 HG02630.hp1 HG02886.hp1 HG02896.hp2 HG02897.hp1 HG02970.hp2 HG03130.hp2 HG03209.hp1 HG04115.hp2 HG04228.hp1 HG06807.hp2 NA18942.hp1 NA18952.hp1 NA18954.hp2 NA18957.hp1 NA18960.hp2 NA18961.hp2 NA18964.hp1 NA18967.hp2 NA18969.hp2 NA18971.hp2 NA18974.hp2 NA18982.hp1 NA18983.hp2 NA18990.hp2 NA18997.hp2 NA18998.hp2 NA18999.hp1 NA19006.hp2 NA19007.hp2 NA19066.hp1 NA19072.hp2 NA19077.hp1 NA19083.hp1 NA19084.hp2 NA19088.hp2 NA19089.hp1 NA20905.hp2 NA21309.hp1	intron_variant	MODIFIER	c.565+1270T>C c.565+1270T>C	CLN5	ENSG00000102805.16	transcript	ENST00000377453.9	protein_coding	3/3		chr13	76997397
chr13:76997416	G G	T T	1	a0001c0001t0001g0048 a0001c0001t0001g0048	1	HG03017.hp2 HG03017.hp2	intron_variant	MODIFIER	c.565+1289G>T c.565+1289G>T	CLN5	ENSG00000102805.16	transcript	ENST00000377453.9	protein_coding	3/3		chr13	76997416
chr13:76997442	G G	A A	1	a0002c0002t0004g0062 a0002c0002t0004g0062	1	NA18612.hp2 NA18612.hp2	intron_variant	MODIFIER	c.565+1315G>A c.565+1315G>A	CLN5	ENSG00000102805.16	transcript	ENST00000377453.9	protein_coding	3/3		chr13	76997442
chr13:76997811	A A	C C	17	a0002c0002t0004g0007 a0002c0002t0004g0010 a0002c0002t0004g0061 others(14): Show a0002c0002t0004g0007 a0002c0002t0004g0010 a0002c0002t0004g0061 a0002c0002t0004g0062 a0002c0002t0004g0063 a0002c0002t0004g0064 a0002c0002t0004g0065 a0002c0002t0008g0017 a0002c0002t0008g0018 a0002c0002t0012g0007 a0002c0002t0012g0066 a0002c0002t0015g0023 a0002c0002t0018g0007 a0002c0002t0020g0007 a0002c0002t0021g0010 a0002c0002t0036g0037 a0004c0008t0008g0032	41	HG00621.hp2 HG01069.hp2 HG01071.hp2 others(38): Show HG00621.hp2 HG01069.hp2 HG01071.hp2 HG01256.hp1 HG01258.hp2 HG01891.hp2 HG02132.hp2 HG02257.hp2 HG02280.hp1 HG02486.hp2 HG02630.hp2 HG02717.hp1 HG02723.hp1 HG02723.hp2 HG02886.hp2 HG02895.hp1 HG02922.hp1 HG02965.hp1 HG02970.hp1 HG02976.hp1 HG03195.hp2 HG03209.hp2 HG03225.hp1 HG03453.hp2 HG03486.hp2 HG03540.hp1 HG03579.hp1 HG03579.hp2 HG06807.hp1 NA18612.hp2 NA18906.hp2 NA18940.hp1 NA18995.hp1 NA19005.hp2 NA19059.hp1 NA19068.hp2 NA19089.hp2 NA19090.hp1 NA19240.hp1 NA19240.hp2 NA20129.hp2	intron_variant	MODIFIER	c.565+1684A>C c.565+1684A>C	CLN5	ENSG00000102805.16	transcript	ENST00000377453.9	protein_coding	3/3		chr13	76997811
chr13:76997844	A A	G G	1	a0002c0004t0006g0040 a0002c0004t0006g0040	1	HG02055.hp1 HG02055.hp1	intron_variant	MODIFIER	c.565+1717A>G c.565+1717A>G	CLN5	ENSG00000102805.16	transcript	ENST00000377453.9	protein_coding	3/3		chr13	76997844
chr13:76998710	A A	T T	1	a0002c0004t0006g0040 a0002c0004t0006g0040	1	HG02055.hp1 HG02055.hp1	intron_variant	MODIFIER	c.566-1748A>T c.566-1748A>T	CLN5	ENSG00000102805.16	transcript	ENST00000377453.9	protein_coding	3/3		chr13	76998710
chr13:76998911	A A	G G	9	a0002c0002t0009g0019 a0002c0002t0009g0028 a0002c0002t0009g0030 others(6): Show a0002c0002t0009g0019 a0002c0002t0009g0028 a0002c0002t0009g0030 a0002c0002t0042g0030 a0002c0004t0006g0009 a0002c0004t0006g0012 a0002c0004t0006g0039 a0002c0004t0006g0040 a0002c0004t0043g0009	24	HG00735.hp1 HG00741.hp1 HG01099.hp1 others(21): Show HG00735.hp1 HG00741.hp1 HG01099.hp1 HG01109.hp2 HG01243.hp2 HG01496.hp1 HG01884.hp1 HG01981.hp1 HG02055.hp1 HG02451.hp1 HG02451.hp2 HG02486.hp1 HG02572.hp1 HG02615.hp1 HG02615.hp2 HG02622.hp1 HG02622.hp2 HG02886.hp1 HG02896.hp2 HG02897.hp1 HG02970.hp2 HG03130.hp2 HG03209.hp1 HG06807.hp2	intron_variant	MODIFIER	c.566-1547A>G c.566-1547A>G	CLN5	ENSG00000102805.16	transcript	ENST00000377453.9	protein_coding	3/3		chr13	76998911
chr13:76999009	T T	TA TA	3	a0002c0002t0008g0017 a0002c0002t0008g0018 a0004c0008t0008g0032 a0002c0002t0008g0017 a0002c0002t0008g0018 a0004c0008t0008g0032	7	HG01256.hp1 HG01258.hp2 HG02922.hp1 others(4): Show HG01256.hp1 HG01258.hp2 HG02922.hp1 HG02965.hp1 HG02970.hp1 HG03225.hp1 HG03486.hp2	intron_variant	MODIFIER	c.566-1446dupA c.566-1446dupA	CLN5	ENSG00000102805.16	transcript	ENST00000377453.9	protein_coding	3/3	INFO_REALIGN_3_PRIME	chr13	76999009
chr13:76999045	T T	C C	3	a0002c0002t0008g0017 a0002c0002t0008g0018 a0004c0008t0008g0032 a0002c0002t0008g0017 a0002c0002t0008g0018 a0004c0008t0008g0032	7	HG01256.hp1 HG01258.hp2 HG02922.hp1 others(4): Show HG01256.hp1 HG01258.hp2 HG02922.hp1 HG02965.hp1 HG02970.hp1 HG03225.hp1 HG03486.hp2	intron_variant	MODIFIER	c.566-1413T>C c.566-1413T>C	CLN5	ENSG00000102805.16	transcript	ENST00000377453.9	protein_coding	3/3		chr13	76999045
chr13:76999046	C C	A A	3	a0002c0002t0008g0017 a0002c0002t0008g0018 a0004c0008t0008g0032 a0002c0002t0008g0017 a0002c0002t0008g0018 a0004c0008t0008g0032	7	HG01256.hp1 HG01258.hp2 HG02922.hp1 others(4): Show HG01256.hp1 HG01258.hp2 HG02922.hp1 HG02965.hp1 HG02970.hp1 HG03225.hp1 HG03486.hp2	intron_variant	MODIFIER	c.566-1412C>A c.566-1412C>A	CLN5	ENSG00000102805.16	transcript	ENST00000377453.9	protein_coding	3/3		chr13	76999046
chr13:76999108	G G	T T	2	a0002c0002t0015g0023 a0002c0002t0036g0037 a0002c0002t0015g0023 a0002c0002t0036g0037	4	HG01891.hp2 HG02886.hp2 HG02976.hp1 others(1): Show HG01891.hp2 HG02886.hp2 HG02976.hp1 NA19240.hp2	intron_variant	MODIFIER	c.566-1350G>T c.566-1350G>T	CLN5	ENSG00000102805.16	transcript	ENST00000377453.9	protein_coding	3/3		chr13	76999108
chr13:76999413	A A	G G	49	a0001c0001t0005g0008 a0001c0001t0005g0041 a0001c0001t0005g0042 others(46): Show a0001c0001t0005g0008 a0001c0001t0005g0041 a0001c0001t0005g0042 a0001c0001t0005g0043 a0001c0001t0007g0011 a0001c0001t0032g0008 a0001c0001t0037g0034 a0002c0002t0002g0005 a0002c0002t0002g0006 a0002c0002t0002g0025 a0002c0002t0002g0031 a0002c0002t0004g0007 a0002c0002t0004g0010 a0002c0002t0004g0061 a0002c0002t0004g0062 a0002c0002t0004g0063 a0002c0002t0004g0064 a0002c0002t0004g0065 a0002c0002t0008g0017 a0002c0002t0008g0018 a0002c0002t0009g0019 a0002c0002t0009g0028 a0002c0002t0009g0030 a0002c0002t0012g0007 a0002c0002t0012g0066 a0002c0002t0015g0023 a0002c0002t0018g0007 a0002c0002t0020g0007 a0002c0002t0021g0010 a0002c0002t0022g0053 a0002c0002t0036g0037 a0002c0002t0038g0068 a0002c0002t0039g0067 a0002c0002t0040g0005 a0002c0002t0041g0005 a0002c0002t0042g0030 a0002c0003t0003g0004 a0002c0003t0003g0014 a0002c0003t0003g0036 a0002c0003t0003g0038 a0002c0003t0017g0004 a0002c0003t0034g0014 a0002c0003t0035g0004 a0002c0004t0006g0009 a0002c0004t0006g0012 a0002c0004t0006g0039 a0002c0004t0006g0040 a0002c0004t0043g0009 a0004c0008t0008g0032	171	HG00099.hp1 HG00099.hp2 HG00438.hp2 others(168): Show HG00099.hp1 HG00099.hp2 HG00438.hp2 HG00621.hp2 HG00735.hp1 HG00735.hp2 HG00741.hp1 HG01069.hp2 HG01071.hp2 HG01099.hp1 HG01109.hp2 HG01243.hp2 HG01255.hp2 HG01256.hp1 HG01257.hp1 HG01258.hp2 HG01346.hp2 HG01496.hp1 HG01884.hp1 HG01891.hp2 HG01928.hp1 HG01934.hp2 HG01975.hp2 HG01981.hp1 HG01981.hp2 HG02015.hp1 HG02027.hp1 HG02055.hp1 HG02056.hp1 HG02056.hp2 HG02071.hp2 HG02109.hp1 HG02129.hp2 HG02132.hp1 HG02132.hp2 HG02145.hp1 HG02148.hp1 HG02155.hp2 HG02257.hp2 HG02273.hp1 HG02280.hp1 HG02293.hp1 HG02451.hp1 HG02451.hp2 HG02486.hp1 HG02486.hp2 HG02559.hp2 HG02572.hp1 HG02615.hp1 HG02615.hp2 HG02622.hp1 HG02622.hp2 HG02630.hp1 HG02630.hp2 HG02647.hp1 HG02717.hp1 HG02717.hp2 HG02723.hp1 HG02723.hp2 HG02809.hp2 HG02818.hp1 HG02818.hp2 HG02886.hp1 HG02886.hp2 HG02895.hp1 HG02896.hp1 HG02896.hp2 HG02897.hp1 HG02922.hp1 HG02922.hp2 HG02965.hp1 HG02965.hp2 HG02970.hp1 HG02970.hp2 HG02976.hp1 HG03041.hp2 HG03098.hp1 HG03130.hp2 HG03139.hp1 HG03195.hp2 HG03209.hp1 HG03209.hp2 HG03225.hp1 HG03225.hp2 HG03453.hp1 HG03453.hp2 HG03471.hp1 HG03471.hp2 HG03486.hp1 HG03486.hp2 HG03516.hp1 HG03516.hp2 HG03540.hp1 HG03540.hp2 HG03579.hp1 HG03579.hp2 HG04115.hp2 HG04228.hp1 HG06807.hp1 HG06807.hp2 NA18522.hp1 NA18612.hp2 NA18906.hp1 NA18906.hp2 NA18940.hp1 NA18942.hp1 NA18943.hp2 NA18945.hp2 NA18946.hp2 NA18951.hp2 NA18952.hp1 NA18952.hp2 NA18954.hp2 NA18956.hp2 NA18957.hp1 NA18960.hp2 NA18961.hp2 NA18964.hp1 NA18966.hp1 NA18967.hp2 NA18969.hp2 NA18971.hp2 NA18972.hp1 NA18974.hp2 NA18977.hp2 NA18978.hp1 NA18981.hp2 NA18982.hp1 NA18982.hp2 NA18983.hp1 NA18983.hp2 NA18987.hp1 NA18989.hp1 NA18990.hp2 NA18995.hp1 NA18995.hp2 NA18997.hp1 NA18997.hp2 NA18998.hp1 NA18998.hp2 NA18999.hp1 NA19002.hp2 NA19005.hp2 NA19006.hp2 NA19007.hp2 NA19010.hp1 NA19056.hp1 NA19058.hp1 NA19059.hp1 NA19059.hp2 NA19060.hp2 NA19066.hp1 NA19068.hp2 NA19072.hp2 NA19075.hp1 NA19077.hp1 NA19079.hp1 NA19081.hp2 NA19083.hp1 NA19083.hp2 NA19084.hp2 NA19088.hp2 NA19089.hp1 NA19089.hp2 NA19090.hp1 NA19240.hp1 NA19240.hp2 NA20129.hp2 NA20905.hp2 NA21309.hp1 NA21309.hp2	intron_variant	MODIFIER	c.566-1045A>G c.566-1045A>G	CLN5	ENSG00000102805.16	transcript	ENST00000377453.9	protein_coding	3/3		chr13	76999413
chr13:76999478	T T	C C	2	a0001c0001t0001g0021 a0001c0001t0001g0044 a0001c0001t0001g0021 a0001c0001t0001g0044	4	HG00280.hp1 HG01168.hp2 HG01169.hp1 others(1): Show HG00280.hp1 HG01168.hp2 HG01169.hp1 HG03017.hp1	intron_variant	MODIFIER	c.566-980T>C c.566-980T>C	CLN5	ENSG00000102805.16	transcript	ENST00000377453.9	protein_coding	3/3		chr13	76999478
chr13:76999512	C C	G G	1	a0001c0001t0001g0051 a0001c0001t0001g0051	1	HG03942.hp2 HG03942.hp2	intron_variant	MODIFIER	c.566-946C>G c.566-946C>G	CLN5	ENSG00000102805.16	transcript	ENST00000377453.9	protein_coding	3/3		chr13	76999512
chr13:76999525	G G	A A	13	a0002c0002t0002g0005 a0002c0002t0002g0006 a0002c0002t0002g0025 others(10): Show a0002c0002t0002g0005 a0002c0002t0002g0006 a0002c0002t0002g0025 a0002c0002t0002g0031 a0002c0002t0038g0068 a0002c0002t0039g0067 a0002c0002t0040g0005 a0002c0002t0041g0005 a0002c0004t0006g0009 a0002c0004t0006g0012 a0002c0004t0006g0039 a0002c0004t0006g0040 a0002c0004t0043g0009	63	HG00099.hp1 HG00438.hp2 HG00735.hp1 others(60): Show HG00099.hp1 HG00438.hp2 HG00735.hp1 HG00741.hp1 HG01099.hp1 HG01109.hp2 HG01243.hp2 HG01255.hp2 HG01257.hp1 HG01496.hp1 HG01934.hp2 HG01975.hp2 HG01981.hp2 HG02027.hp1 HG02055.hp1 HG02056.hp2 HG02071.hp2 HG02129.hp2 HG02148.hp1 HG02155.hp2 HG02273.hp1 HG02293.hp1 HG02451.hp2 HG02486.hp1 HG02615.hp2 HG02622.hp1 HG02630.hp1 HG02886.hp1 HG02896.hp2 HG02897.hp1 HG03130.hp2 HG03209.hp1 HG04115.hp2 HG04228.hp1 HG06807.hp2 NA18942.hp1 NA18952.hp1 NA18954.hp2 NA18957.hp1 NA18960.hp2 NA18961.hp2 NA18964.hp1 NA18967.hp2 NA18969.hp2 NA18971.hp2 NA18974.hp2 NA18982.hp1 NA18983.hp2 NA18990.hp2 NA18997.hp2 NA18998.hp2 NA18999.hp1 NA19006.hp2 NA19007.hp2 NA19066.hp1 NA19072.hp2 NA19077.hp1 NA19083.hp1 NA19084.hp2 NA19088.hp2 NA19089.hp1 NA20905.hp2 NA21309.hp1	intron_variant	MODIFIER	c.566-933G>A c.566-933G>A	CLN5	ENSG00000102805.16	transcript	ENST00000377453.9	protein_coding	3/3		chr13	76999525
chr13:76999582	T T	C C	2	a0001c0001t0001g0021 a0001c0001t0001g0044 a0001c0001t0001g0021 a0001c0001t0001g0044	4	HG00280.hp1 HG01168.hp2 HG01169.hp1 others(1): Show HG00280.hp1 HG01168.hp2 HG01169.hp1 HG03017.hp1	intron_variant	MODIFIER	c.566-876T>C c.566-876T>C	CLN5	ENSG00000102805.16	transcript	ENST00000377453.9	protein_coding	3/3		chr13	76999582
chr13:76999915	A A	G G	1	a0001c0001t0001g0050 a0001c0001t0001g0050	1	HG02683.hp1 HG02683.hp1	intron_variant	MODIFIER	c.566-543A>G c.566-543A>G	CLN5	ENSG00000102805.16	transcript	ENST00000377453.9	protein_coding	3/3		chr13	76999915
chr13:77000059	CTTAAAA CTTAAAA	C C	3	a0002c0002t0008g0017 a0002c0002t0008g0018 a0004c0008t0008g0032 a0002c0002t0008g0017 a0002c0002t0008g0018 a0004c0008t0008g0032	7	HG01256.hp1 HG01258.hp2 HG02922.hp1 others(4): Show HG01256.hp1 HG01258.hp2 HG02922.hp1 HG02965.hp1 HG02970.hp1 HG03225.hp1 HG03486.hp2	intron_variant	MODIFIER	c.566-394_566-389del others(6): Show c.566-394_566-389delAATTAA	CLN5	ENSG00000102805.16	transcript	ENST00000377453.9	protein_coding	3/3	INFO_REALIGN_3_PRIME	chr13	77000059
chr13:77000069	A A	G G	5	a0001c0001t0005g0008 a0001c0001t0005g0041 a0001c0001t0005g0042 others(2): Show a0001c0001t0005g0008 a0001c0001t0005g0041 a0001c0001t0005g0042 a0001c0001t0005g0043 a0001c0001t0032g0008	17	HG00735.hp2 HG02109.hp1 HG02145.hp1 others(14): Show HG00735.hp2 HG02109.hp1 HG02145.hp1 HG02717.hp2 HG02809.hp2 HG02818.hp2 HG02922.hp2 HG03041.hp2 HG03098.hp1 HG03139.hp1 HG03225.hp2 HG03453.hp1 HG03471.hp2 HG03516.hp1 HG03516.hp2 NA18906.hp1 NA21309.hp2	intron_variant	MODIFIER	c.566-389A>G c.566-389A>G	CLN5	ENSG00000102805.16	transcript	ENST00000377453.9	protein_coding	3/3		chr13	77000069
chr13:77000117	T T	C C	1	a0001c0001t0005g0041 a0001c0001t0005g0041	1	HG02145.hp1 HG02145.hp1	intron_variant	MODIFIER	c.566-341T>C c.566-341T>C	CLN5	ENSG00000102805.16	transcript	ENST00000377453.9	protein_coding	3/3		chr13	77000117
chr13:77000137	A A	C C	3	a0002c0002t0008g0017 a0002c0002t0008g0018 a0004c0008t0008g0032 a0002c0002t0008g0017 a0002c0002t0008g0018 a0004c0008t0008g0032	7	HG01256.hp1 HG01258.hp2 HG02922.hp1 others(4): Show HG01256.hp1 HG01258.hp2 HG02922.hp1 HG02965.hp1 HG02970.hp1 HG03225.hp1 HG03486.hp2	intron_variant	MODIFIER	c.566-321A>C c.566-321A>C	CLN5	ENSG00000102805.16	transcript	ENST00000377453.9	protein_coding	3/3		chr13	77000137
chr13:77000311	G G	A A	1	a0002c0004t0006g0040 a0002c0004t0006g0040	1	HG02055.hp1 HG02055.hp1	intron_variant	MODIFIER	c.566-147G>A c.566-147G>A	CLN5	ENSG00000102805.16	transcript	ENST00000377453.9	protein_coding	3/3		chr13	77000311
chr13:77000361	G G	A A	12	a0002c0002t0004g0007 a0002c0002t0004g0010 a0002c0002t0004g0061 others(9): Show a0002c0002t0004g0007 a0002c0002t0004g0010 a0002c0002t0004g0061 a0002c0002t0004g0062 a0002c0002t0004g0063 a0002c0002t0004g0064 a0002c0002t0004g0065 a0002c0002t0012g0007 a0002c0002t0012g0066 a0002c0002t0018g0007 a0002c0002t0020g0007 a0002c0002t0021g0010	30	HG00621.hp2 HG01069.hp2 HG01071.hp2 others(27): Show HG00621.hp2 HG01069.hp2 HG01071.hp2 HG02132.hp2 HG02257.hp2 HG02280.hp1 HG02486.hp2 HG02630.hp2 HG02717.hp1 HG02723.hp1 HG02723.hp2 HG02895.hp1 HG03195.hp2 HG03209.hp2 HG03453.hp2 HG03540.hp1 HG03579.hp1 HG03579.hp2 HG06807.hp1 NA18612.hp2 NA18906.hp2 NA18940.hp1 NA18995.hp1 NA19005.hp2 NA19059.hp1 NA19068.hp2 NA19089.hp2 NA19090.hp1 NA19240.hp1 NA20129.hp2	intron_variant	MODIFIER	c.566-97G>A c.566-97G>A	CLN5	ENSG00000102805.16	transcript	ENST00000377453.9	protein_coding	3/3		chr13	77000361
chr13:77000383	T T	TA TA	14	a0001c0001t0001g0047 a0001c0001t0001g0049 a0001c0001t0005g0042 others(11): Show a0001c0001t0001g0047 a0001c0001t0001g0049 a0001c0001t0005g0042 a0001c0001t0025g0060 a0001c0001t0037g0034 a0002c0002t0002g0031 a0002c0002t0004g0063 a0002c0002t0004g0065 a0002c0002t0009g0019 a0002c0002t0009g0030 a0002c0002t0042g0030 a0002c0004t0006g0009 a0002c0004t0006g0040 a0002c0004t0043g0009	25	HG00735.hp1 HG00741.hp1 HG01099.hp1 others(22): Show HG00735.hp1 HG00741.hp1 HG01099.hp1 HG01257.hp1 HG01496.hp1 HG01981.hp1 HG02040.hp2 HG02055.hp1 HG02145.hp2 HG02451.hp2 HG02486.hp1 HG02572.hp1 HG02602.hp2 HG02615.hp1 HG02615.hp2 HG02622.hp1 HG02622.hp2 HG02717.hp2 HG02896.hp2 HG02970.hp2 HG03209.hp1 NA18522.hp1 NA18997.hp2 NA19059.hp1 NA19240.hp1	intron_variant	MODIFIER	c.566-55dupA c.566-55dupA	CLN5	ENSG00000102805.16	transcript	ENST00000377453.9	protein_coding	3/3	INFO_REALIGN_3_PRIME	chr13	77000383
chr13:77000383	T T	TAA TAA	7	a0002c0002t0002g0005 a0002c0002t0002g0006 a0002c0002t0002g0025 others(4): Show a0002c0002t0002g0005 a0002c0002t0002g0006 a0002c0002t0002g0025 a0002c0002t0039g0067 a0002c0002t0040g0005 a0002c0002t0041g0005 a0002c0004t0006g0012	48	HG00099.hp1 HG00438.hp2 HG01109.hp2 others(45): Show HG00099.hp1 HG00438.hp2 HG01109.hp2 HG01243.hp2 HG01255.hp2 HG01934.hp2 HG01981.hp2 HG02027.hp1 HG02056.hp2 HG02071.hp2 HG02129.hp2 HG02148.hp1 HG02155.hp2 HG02273.hp1 HG02293.hp1 HG02630.hp1 HG02886.hp1 HG03130.hp2 HG04115.hp2 HG04228.hp1 HG06807.hp2 NA18942.hp1 NA18952.hp1 NA18954.hp2 NA18957.hp1 NA18960.hp2 NA18961.hp2 NA18964.hp1 NA18967.hp2 NA18969.hp2 NA18971.hp2 NA18974.hp2 NA18982.hp1 NA18983.hp2 NA18990.hp2 NA18998.hp2 NA18999.hp1 NA19006.hp2 NA19007.hp2 NA19066.hp1 NA19072.hp2 NA19077.hp1 NA19083.hp1 NA19084.hp2 NA19088.hp2 NA19089.hp1 NA20905.hp2 NA21309.hp1	intron_variant	MODIFIER	c.566-56_566-55dupAA c.566-56_566-55dupAA	CLN5	ENSG00000102805.16	transcript	ENST00000377453.9	protein_coding	3/3	INFO_REALIGN_3_PRIME	chr13	77000383
chr13:77000383	TA TA	T T	18	a0001c0001t0001g0015 a0001c0001t0001g0020 a0001c0001t0001g0052 others(15): Show a0001c0001t0001g0015 a0001c0001t0001g0020 a0001c0001t0001g0052 a0001c0001t0005g0043 a0001c0001t0010g0015 a0001c0001t0016g0020 a0001c0001t0030g0015 a0002c0002t0004g0062 a0002c0002t0004g0064 a0002c0002t0012g0066 a0002c0002t0015g0023 a0002c0002t0036g0037 a0002c0003t0003g0004 a0002c0003t0003g0014 a0002c0003t0003g0036 a0002c0003t0017g0004 a0002c0003t0034g0014 a0002c0003t0035g0004	48	HG00099.hp2 HG01168.hp1 HG01346.hp2 others(45): Show HG00099.hp2 HG01168.hp1 HG01346.hp2 HG01884.hp2 HG01891.hp2 HG01928.hp1 HG02015.hp1 HG02056.hp1 HG02132.hp1 HG02886.hp2 HG02922.hp2 HG02976.hp1 HG03041.hp1 HG03195.hp2 HG03490.hp1 HG03490.hp2 NA18612.hp2 NA18942.hp2 NA18943.hp2 NA18945.hp2 NA18946.hp2 NA18951.hp2 NA18952.hp2 NA18954.hp1 NA18956.hp2 NA18966.hp1 NA18972.hp1 NA18977.hp2 NA18978.hp1 NA18981.hp2 NA18982.hp2 NA18983.hp1 NA18987.hp1 NA18989.hp1 NA18995.hp2 NA18997.hp1 NA18998.hp1 NA19002.hp2 NA19005.hp2 NA19010.hp1 NA19058.hp1 NA19059.hp2 NA19060.hp2 NA19065.hp2 NA19075.hp1 NA19079.hp1 NA19081.hp2 NA19240.hp2	intron_variant	MODIFIER	c.566-55delA c.566-55delA	CLN5	ENSG00000102805.16	transcript	ENST00000377453.9	protein_coding	3/3	INFO_REALIGN_3_PRIME	chr13	77000383

Search by Genic region

Search

🧬 JoGo Online Haplotype Explorer CLN5_chr13_76987081_77010117

JoGo Local Haplotype Explorer (on iGV) CLN5_chr13_76987081_77010117

Translation Multiple Alignment View

ACTG-Haplotype Mutation Positions 3D Viewer

🧬 Gene Summary

AAmino acid(protein) Level Haplotype Info (Total: 5)

CCoding Level Haplotype Info (Total: 9)

TTranscript Level Haplotype Info (Total: 43)

GGenebody Level Haplotype Info (Total: 68)

A C AC Level (Amino Acid + Coding) Haplotype Info (Total: 9)

A C T ACT Level (Amino Acid + Coding + Transcript) Haplotype Info (Total: 48)

A C T G ACTG Level (Amino Acid + Coding + Transcript + Genebody) Haplotype Info (Total: 99)

Haplotype Details by Sample (Haploid Level) (Total: 430)

AAmino acid(protein) Level Haplotype Related Variants (Effect to Protein Coding Variants) (Total: 4)

CCoding Level Variants (Synonymous Mutations) (Total: 4)

TTranscript Level Haplotype Variants (5'UTR+3'UTR) (Total: 45)

GGenebody Level Haplotype Variants (Intron) (Total: 93)

External Link

Annotation (Repeats)

Annotation (SNP Array)