Search by Genic region
Multiple Alignments (by aa haplotype frequency)
Multiple Alignments (by aa haplotype similarity)
| geneid | 203430 |
|---|---|
| ensemblid | ENSG00000179300.4 |
| hgncid | 22997 |
| symbol | RTL3 |
| name | retrotransposon Gag like 3 |
| refseq_nuc | NM_152694.3 |
| refseq_prot | NP_689907.1 |
| ensembl_nuc | ENST00000321110.2 |
| ensembl_prot | ENSP00000316794.1 |
| mane_status | MANE Select |
| chr | chrX |
| start | 78656068 |
| end | 78659328 |
| strand | - |
| ver | v1.2 |
| region | chrX:78656068-78659328 |
| region5000 | chrX:78651068-78664328 |
| regionname0 | RTL3_chrX_78656068_78659328 |
| regionname5000 | RTL3_chrX_78651068_78664328 |
| ahapid | grch38/chm13v2 1/0: The haplotype type is the same as GRCh380/1: The haplotype type is the same as CHM13v20/0: The haplotype type matches neither GRCh38 nor CHM13v21/1: The haplotype type is the same on both GRCh38 and CHM13v2
|
alen | total | AFR | AMR | EAS | EUR | SAS | JPT | regionname | genename | aa | chr | start | end |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| a0001 | 1/1 | 475 | 291 | 55 | 58 | 144 | 9 | 23 | 115 | RTL3_chrX_78651068_78664328 | RTL3 | copy fasta | chrX | 78651068 | 78664328 |
| a0002 | 0/0 | 475 | 17 | 8 | 2 | 1 | 4 | 2 | 0 | RTL3_chrX_78651068_78664328 | RTL3 | copy fasta | chrX | 78651068 | 78664328 |
| a0003 | 0/0 | 475 | 5 | 3 | 2 | 0 | 0 | 0 | 0 | RTL3_chrX_78651068_78664328 | RTL3 | copy fasta | chrX | 78651068 | 78664328 |
| a0004 | 0/0 | 475 | 2 | 0 | 0 | 2 | 0 | 0 | 2 | RTL3_chrX_78651068_78664328 | RTL3 | copy fasta | chrX | 78651068 | 78664328 |
| a0005 | 0/0 | 475 | 2 | 1 | 1 | 0 | 0 | 0 | 0 | RTL3_chrX_78651068_78664328 | RTL3 | copy fasta | chrX | 78651068 | 78664328 |
| a0006 | 0/0 | 52 | 1 | 0 | 1 | 0 | 0 | 0 | 0 | RTL3_chrX_78651068_78664328 | RTL3 | copy fasta | chrX | 78651068 | 78664328 |
| a0007 | 0/0 | 179 | 1 | 0 | 1 | 0 | 0 | 0 | 0 | RTL3_chrX_78651068_78664328 | RTL3 | copy fasta | chrX | 78651068 | 78664328 |
| a0008 | 0/0 | 475 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | RTL3_chrX_78651068_78664328 | RTL3 | copy fasta | chrX | 78651068 | 78664328 |
| a0009 | 0/0 | 475 | 1 | 0 | 0 | 1 | 0 | 0 | 0 | RTL3_chrX_78651068_78664328 | RTL3 | copy fasta | chrX | 78651068 | 78664328 |
| a0010 | 0/0 | 475 | 1 | 0 | 0 | 0 | 0 | 1 | 0 | RTL3_chrX_78651068_78664328 | RTL3 | copy fasta | chrX | 78651068 | 78664328 |
| chapid | grch38/chm13v2 1/0: The haplotype type is the same as GRCh380/1: The haplotype type is the same as CHM13v20/0: The haplotype type matches neither GRCh38 nor CHM13v21/1: The haplotype type is the same on both GRCh38 and CHM13v2
|
clen | total | AFR | AMR | EAS | EUR | SAS | regionname | genename | cseq | chr | start | end |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| c0001 | 1/1 | 1428 | 286 | 55 | 57 | 140 | 9 | 23 | RTL3_chrX_78651068_78664328 | RTL3 | copy fasta | chrX | 78651068 | 78664328 |
| c0002 | 0/0 | 1428 | 17 | 8 | 2 | 1 | 4 | 2 | RTL3_chrX_78651068_78664328 | RTL3 | copy fasta | chrX | 78651068 | 78664328 |
| c0003 | 0/0 | 1428 | 5 | 3 | 2 | 0 | 0 | 0 | RTL3_chrX_78651068_78664328 | RTL3 | copy fasta | chrX | 78651068 | 78664328 |
| c0004 | 0/0 | 1428 | 4 | 0 | 0 | 4 | 0 | 0 | RTL3_chrX_78651068_78664328 | RTL3 | copy fasta | chrX | 78651068 | 78664328 |
| c0005 | 0/0 | 1428 | 2 | 0 | 0 | 2 | 0 | 0 | RTL3_chrX_78651068_78664328 | RTL3 | copy fasta | chrX | 78651068 | 78664328 |
| c0006 | 0/0 | 1428 | 2 | 1 | 1 | 0 | 0 | 0 | RTL3_chrX_78651068_78664328 | RTL3 | copy fasta | chrX | 78651068 | 78664328 |
| c0007 | 0/0 | 1428 | 1 | 0 | 1 | 0 | 0 | 0 | RTL3_chrX_78651068_78664328 | RTL3 | copy fasta | chrX | 78651068 | 78664328 |
| c0008 | 0/0 | 1427 | 1 | 0 | 1 | 0 | 0 | 0 | RTL3_chrX_78651068_78664328 | RTL3 | copy fasta | chrX | 78651068 | 78664328 |
| c0009 | 0/0 | 1428 | 1 | 0 | 0 | 0 | 0 | 1 | RTL3_chrX_78651068_78664328 | RTL3 | copy fasta | chrX | 78651068 | 78664328 |
| c0010 | 0/0 | 1428 | 1 | 0 | 0 | 1 | 0 | 0 | RTL3_chrX_78651068_78664328 | RTL3 | copy fasta | chrX | 78651068 | 78664328 |
| c0011 | 0/0 | 1428 | 1 | 1 | 0 | 0 | 0 | 0 | RTL3_chrX_78651068_78664328 | RTL3 | copy fasta | chrX | 78651068 | 78664328 |
| c0012 | 0/0 | 1428 | 1 | 0 | 1 | 0 | 0 | 0 | RTL3_chrX_78651068_78664328 | RTL3 | copy fasta | chrX | 78651068 | 78664328 |
| thapid | grch38chm13v2 1/0: The haplotype type is the same as GRCh380/1: The haplotype type is the same as CHM13v20/0: The haplotype type matches neither GRCh38 nor CHM13v21/1: The haplotype type is the same on both GRCh38 and CHM13v2
|
tlen | total | AFR | AMR | EAS | EUR | SAS | regionname | genename | tseq | chr | start | end |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| t0001 | 1/1 | 1222 | 254 | 25 | 56 | 140 | 8 | 23 | RTL3_chrX_78651068_78664328 | RTL3 | copy fasta | chrX | 78651068 | 78664328 |
| t0002 | 0/0 | 1223 | 52 | 34 | 8 | 3 | 4 | 3 | RTL3_chrX_78651068_78664328 | RTL3 | copy fasta | chrX | 78651068 | 78664328 |
| t0003 | 0/0 | 1223 | 3 | 3 | 0 | 0 | 0 | 0 | RTL3_chrX_78651068_78664328 | RTL3 | copy fasta | chrX | 78651068 | 78664328 |
| t0004 | 0/0 | 1222 | 3 | 3 | 0 | 0 | 0 | 0 | RTL3_chrX_78651068_78664328 | RTL3 | copy fasta | chrX | 78651068 | 78664328 |
| t0005 | 0/0 | 1224 | 2 | 1 | 1 | 0 | 0 | 0 | RTL3_chrX_78651068_78664328 | RTL3 | copy fasta | chrX | 78651068 | 78664328 |
| t0006 | 0/0 | 1223 | 1 | 1 | 0 | 0 | 0 | 0 | RTL3_chrX_78651068_78664328 | RTL3 | copy fasta | chrX | 78651068 | 78664328 |
| t0007 | 0/0 | 1214 | 1 | 0 | 0 | 1 | 0 | 0 | RTL3_chrX_78651068_78664328 | RTL3 | copy fasta | chrX | 78651068 | 78664328 |
| t0008 | 0/0 | 1223 | 1 | 0 | 0 | 1 | 0 | 0 | RTL3_chrX_78651068_78664328 | RTL3 | copy fasta | chrX | 78651068 | 78664328 |
| t0009 | 0/0 | 1224 | 1 | 1 | 0 | 0 | 0 | 0 | RTL3_chrX_78651068_78664328 | RTL3 | copy fasta | chrX | 78651068 | 78664328 |
| t0010 | 0/0 | 1222 | 1 | 0 | 0 | 1 | 0 | 0 | RTL3_chrX_78651068_78664328 | RTL3 | copy fasta | chrX | 78651068 | 78664328 |
| t0011 | 0/0 | 1223 | 1 | 0 | 0 | 0 | 1 | 0 | RTL3_chrX_78651068_78664328 | RTL3 | copy fasta | chrX | 78651068 | 78664328 |
| t0012 | 0/0 | 1223 | 1 | 0 | 0 | 1 | 0 | 0 | RTL3_chrX_78651068_78664328 | RTL3 | copy fasta | chrX | 78651068 | 78664328 |
| t0013 | 0/0 | 1222 | 1 | 0 | 0 | 1 | 0 | 0 | RTL3_chrX_78651068_78664328 | RTL3 | copy fasta | chrX | 78651068 | 78664328 |
| ghapid | grch38/chm13v2 1/0: The haplotype type is the same as GRCh380/1: The haplotype type is the same as CHM13v20/0: The haplotype type matches neither GRCh38 nor CHM13v21/1: The haplotype type is the same on both GRCh38 and CHM13v2
|
total | AFR | AMR | EAS | EUR | SAS | regionname | genename | chr | start | end |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| g0001 | 0/1 | 234 | 23 | 51 | 131 | 7 | 21 | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| g0002 | 0/0 | 24 | 19 | 2 | 1 | 1 | 1 | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| g0003 | 0/0 | 15 | 7 | 2 | 1 | 3 | 2 | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| g0004 | 1/0 | 9 | 0 | 4 | 2 | 1 | 1 | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| g0005 | 0/0 | 5 | 3 | 2 | 0 | 0 | 0 | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| g0006 | 0/0 | 4 | 0 | 0 | 4 | 0 | 0 | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| g0007 | 0/0 | 3 | 3 | 0 | 0 | 0 | 0 | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| g0008 | 0/0 | 3 | 3 | 0 | 0 | 0 | 0 | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| g0009 | 0/0 | 2 | 2 | 0 | 0 | 0 | 0 | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| g0010 | 0/0 | 2 | 1 | 1 | 0 | 0 | 0 | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| g0011 | 0/0 | 2 | 0 | 0 | 2 | 0 | 0 | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| g0012 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| g0013 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| g0014 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| g0015 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| g0016 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| g0017 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| g0018 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| g0019 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| g0020 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| g0021 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| g0022 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| g0023 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| g0024 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| g0025 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| g0026 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| g0027 | 0/0 | 1 | 0 | 0 | 0 | 1 | 0 | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| g0028 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| g0029 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| g0030 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| achapid | grch38/chm13v2 1/0: The haplotype type is the same as GRCh380/1: The haplotype type is the same as CHM13v20/0: The haplotype type matches neither GRCh38 nor CHM13v21/1: The haplotype type is the same on both GRCh38 and CHM13v2
|
clen | total | AFR | AMR | EAS | EUR | SAS | regionname | genename | cseq | chr | start | end |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| a0001c0001 | 1/1 | 1428 | 286 | 55 | 57 | 140 | 9 | 23 | RTL3_chrX_78651068_78664328 | RTL3 | copy fasta | chrX | 78651068 | 78664328 |
| a0001c0004 | 0/0 | 1428 | 4 | 0 | 0 | 4 | 0 | 0 | RTL3_chrX_78651068_78664328 | RTL3 | copy fasta | chrX | 78651068 | 78664328 |
| a0001c0007 | 0/0 | 1428 | 1 | 0 | 1 | 0 | 0 | 0 | RTL3_chrX_78651068_78664328 | RTL3 | copy fasta | chrX | 78651068 | 78664328 |
| a0002c0002 | 0/0 | 1428 | 17 | 8 | 2 | 1 | 4 | 2 | RTL3_chrX_78651068_78664328 | RTL3 | copy fasta | chrX | 78651068 | 78664328 |
| a0003c0003 | 0/0 | 1428 | 5 | 3 | 2 | 0 | 0 | 0 | RTL3_chrX_78651068_78664328 | RTL3 | copy fasta | chrX | 78651068 | 78664328 |
| a0004c0005 | 0/0 | 1428 | 2 | 0 | 0 | 2 | 0 | 0 | RTL3_chrX_78651068_78664328 | RTL3 | copy fasta | chrX | 78651068 | 78664328 |
| a0005c0006 | 0/0 | 1428 | 2 | 1 | 1 | 0 | 0 | 0 | RTL3_chrX_78651068_78664328 | RTL3 | copy fasta | chrX | 78651068 | 78664328 |
| a0006c0012 | 0/0 | 1428 | 1 | 0 | 1 | 0 | 0 | 0 | RTL3_chrX_78651068_78664328 | RTL3 | copy fasta | chrX | 78651068 | 78664328 |
| a0007c0008 | 0/0 | 1427 | 1 | 0 | 1 | 0 | 0 | 0 | RTL3_chrX_78651068_78664328 | RTL3 | copy fasta | chrX | 78651068 | 78664328 |
| a0008c0011 | 0/0 | 1428 | 1 | 1 | 0 | 0 | 0 | 0 | RTL3_chrX_78651068_78664328 | RTL3 | copy fasta | chrX | 78651068 | 78664328 |
| a0009c0010 | 0/0 | 1428 | 1 | 0 | 0 | 1 | 0 | 0 | RTL3_chrX_78651068_78664328 | RTL3 | copy fasta | chrX | 78651068 | 78664328 |
| a0010c0009 | 0/0 | 1428 | 1 | 0 | 0 | 0 | 0 | 1 | RTL3_chrX_78651068_78664328 | RTL3 | copy fasta | chrX | 78651068 | 78664328 |
| acthapid | grch38chm13v2 | tlen | total | AFR | AMR | EAS | EUR | SAS | regionname | genename | tseq | chr | start | end |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| a0001c0001t0001 | 1/1 | 2649 | 247 | 25 | 55 | 135 | 8 | 22 | RTL3_chrX_78651068_78664328 | RTL3 | copy fasta | chrX | 78651068 | 78664328 |
| a0001c0001t0002 | 0/0 | 2650 | 28 | 23 | 2 | 1 | 1 | 1 | RTL3_chrX_78651068_78664328 | RTL3 | copy fasta | chrX | 78651068 | 78664328 |
| a0001c0001t0003 | 0/0 | 2650 | 3 | 3 | 0 | 0 | 0 | 0 | RTL3_chrX_78651068_78664328 | RTL3 | copy fasta | chrX | 78651068 | 78664328 |
| a0001c0001t0004 | 0/0 | 2649 | 3 | 3 | 0 | 0 | 0 | 0 | RTL3_chrX_78651068_78664328 | RTL3 | copy fasta | chrX | 78651068 | 78664328 |
| a0001c0001t0006 | 0/0 | 2650 | 1 | 1 | 0 | 0 | 0 | 0 | RTL3_chrX_78651068_78664328 | RTL3 | copy fasta | chrX | 78651068 | 78664328 |
| a0001c0001t0007 | 0/0 | 2641 | 1 | 0 | 0 | 1 | 0 | 0 | RTL3_chrX_78651068_78664328 | RTL3 | copy fasta | chrX | 78651068 | 78664328 |
| a0001c0001t0010 | 0/0 | 2649 | 1 | 0 | 0 | 1 | 0 | 0 | RTL3_chrX_78651068_78664328 | RTL3 | copy fasta | chrX | 78651068 | 78664328 |
| a0001c0001t0012 | 0/0 | 2650 | 1 | 0 | 0 | 1 | 0 | 0 | RTL3_chrX_78651068_78664328 | RTL3 | copy fasta | chrX | 78651068 | 78664328 |
| a0001c0001t0013 | 0/0 | 2649 | 1 | 0 | 0 | 1 | 0 | 0 | RTL3_chrX_78651068_78664328 | RTL3 | copy fasta | chrX | 78651068 | 78664328 |
| a0001c0004t0001 | 0/0 | 2649 | 4 | 0 | 0 | 4 | 0 | 0 | RTL3_chrX_78651068_78664328 | RTL3 | copy fasta | chrX | 78651068 | 78664328 |
| a0001c0007t0002 | 0/0 | 2650 | 1 | 0 | 1 | 0 | 0 | 0 | RTL3_chrX_78651068_78664328 | RTL3 | copy fasta | chrX | 78651068 | 78664328 |
| a0002c0002t0002 | 0/0 | 2650 | 15 | 7 | 2 | 1 | 3 | 2 | RTL3_chrX_78651068_78664328 | RTL3 | copy fasta | chrX | 78651068 | 78664328 |
| a0002c0002t0009 | 0/0 | 2651 | 1 | 1 | 0 | 0 | 0 | 0 | RTL3_chrX_78651068_78664328 | RTL3 | copy fasta | chrX | 78651068 | 78664328 |
| a0002c0002t0011 | 0/0 | 2650 | 1 | 0 | 0 | 0 | 1 | 0 | RTL3_chrX_78651068_78664328 | RTL3 | copy fasta | chrX | 78651068 | 78664328 |
| a0003c0003t0002 | 0/0 | 2650 | 5 | 3 | 2 | 0 | 0 | 0 | RTL3_chrX_78651068_78664328 | RTL3 | copy fasta | chrX | 78651068 | 78664328 |
| a0004c0005t0002 | 0/0 | 2650 | 1 | 0 | 0 | 1 | 0 | 0 | RTL3_chrX_78651068_78664328 | RTL3 | copy fasta | chrX | 78651068 | 78664328 |
| a0004c0005t0008 | 0/0 | 2650 | 1 | 0 | 0 | 1 | 0 | 0 | RTL3_chrX_78651068_78664328 | RTL3 | copy fasta | chrX | 78651068 | 78664328 |
| a0005c0006t0005 | 0/0 | 2651 | 2 | 1 | 1 | 0 | 0 | 0 | RTL3_chrX_78651068_78664328 | RTL3 | copy fasta | chrX | 78651068 | 78664328 |
| a0006c0012t0001 | 0/0 | 2649 | 1 | 0 | 1 | 0 | 0 | 0 | RTL3_chrX_78651068_78664328 | RTL3 | copy fasta | chrX | 78651068 | 78664328 |
| a0007c0008t0002 | 0/0 | 2649 | 1 | 0 | 1 | 0 | 0 | 0 | RTL3_chrX_78651068_78664328 | RTL3 | copy fasta | chrX | 78651068 | 78664328 |
| a0008c0011t0002 | 0/0 | 2650 | 1 | 1 | 0 | 0 | 0 | 0 | RTL3_chrX_78651068_78664328 | RTL3 | copy fasta | chrX | 78651068 | 78664328 |
| a0009c0010t0001 | 0/0 | 2649 | 1 | 0 | 0 | 1 | 0 | 0 | RTL3_chrX_78651068_78664328 | RTL3 | copy fasta | chrX | 78651068 | 78664328 |
| a0010c0009t0001 | 0/0 | 2649 | 1 | 0 | 0 | 0 | 0 | 1 | RTL3_chrX_78651068_78664328 | RTL3 | copy fasta | chrX | 78651068 | 78664328 |
| actghapid | grch38/chm13v2 1/0: The haplotype type is the same as GRCh380/1: The haplotype type is the same as CHM13v20/0: The haplotype type matches neither GRCh38 nor CHM13v21/1: The haplotype type is the same on both GRCh38 and CHM13v2
|
total | AFR | AMR | EAS | EUR | SAS | regionname | genename | chr | start | end |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| a0001c0001t0001g0001 | 0/1 | 234 | 23 | 51 | 131 | 7 | 21 | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| a0001c0001t0001g0004 | 1/0 | 9 | 0 | 4 | 2 | 1 | 1 | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| a0001c0001t0001g0011 | 0/0 | 2 | 0 | 0 | 2 | 0 | 0 | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| a0001c0001t0001g0015 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| a0001c0001t0001g0030 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| a0001c0001t0002g0002 | 0/0 | 24 | 19 | 2 | 1 | 1 | 1 | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| a0001c0001t0002g0007 | 0/0 | 3 | 3 | 0 | 0 | 0 | 0 | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| a0001c0001t0002g0013 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| a0001c0001t0003g0008 | 0/0 | 3 | 3 | 0 | 0 | 0 | 0 | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| a0001c0001t0004g0009 | 0/0 | 2 | 2 | 0 | 0 | 0 | 0 | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| a0001c0001t0004g0012 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| a0001c0001t0006g0016 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| a0001c0001t0007g0017 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| a0001c0001t0010g0023 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| a0001c0001t0012g0014 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| a0001c0001t0013g0029 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| a0001c0004t0001g0006 | 0/0 | 4 | 0 | 0 | 4 | 0 | 0 | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| a0001c0007t0002g0018 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| a0002c0002t0002g0003 | 0/0 | 15 | 7 | 2 | 1 | 3 | 2 | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| a0002c0002t0009g0026 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| a0002c0002t0011g0027 | 0/0 | 1 | 0 | 0 | 0 | 1 | 0 | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| a0003c0003t0002g0005 | 0/0 | 5 | 3 | 2 | 0 | 0 | 0 | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| a0004c0005t0002g0021 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| a0004c0005t0008g0020 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| a0005c0006t0005g0010 | 0/0 | 2 | 1 | 1 | 0 | 0 | 0 | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| a0006c0012t0001g0028 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| a0007c0008t0002g0019 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| a0008c0011t0002g0025 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| a0009c0010t0001g0024 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| a0010c0009t0001g0022 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| sampleid | ID haplotypeid
|
ahapid | chapid | thapid | ghapid | gpopname | popname | regionname | genename | chr | start | end |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| HG00099 | hp1 | a0001 | c0001 | t0001 | g0001 | EUR | GBR | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| HG00099 | hp2 | a0001 | c0001 | t0001 | g0001 | EUR | GBR | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| HG00140 | hp1 | a0002 | c0002 | t0011 | g0027 | EUR | GBR | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| HG00280 | hp1 | a0001 | c0001 | t0001 | g0001 | EUR | FIN | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| HG00323 | hp1 | a0001 | c0001 | t0001 | g0001 | EUR | FIN | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| HG00323 | hp2 | a0001 | c0001 | t0002 | g0002 | EUR | FIN | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| HG00408 | hp1 | a0001 | c0001 | t0001 | g0011 | EAS | CHS | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| HG00408 | hp2 | a0001 | c0001 | t0001 | g0001 | EAS | CHS | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| HG00438 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | CHS | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| HG00438 | hp2 | a0001 | c0001 | t0001 | g0001 | EAS | CHS | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| HG00544 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | CHS | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| HG00544 | hp2 | a0001 | c0001 | t0001 | g0001 | EAS | CHS | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| HG00558 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | CHS | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| HG00558 | hp2 | a0001 | c0001 | t0001 | g0001 | EAS | CHS | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| HG00597 | hp1 | a0001 | c0001 | t0007 | g0017 | EAS | CHS | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| HG00597 | hp2 | a0009 | c0010 | t0001 | g0024 | EAS | CHS | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| HG00609 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | CHS | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| HG00621 | hp1 | a0001 | c0001 | t0013 | g0029 | EAS | CHS | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| HG00639 | hp1 | a0001 | c0001 | t0001 | g0001 | AMR | PUR | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| HG00639 | hp2 | a0001 | c0001 | t0001 | g0001 | AMR | PUR | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| HG00642 | hp1 | a0002 | c0002 | t0002 | g0003 | AMR | PUR | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| HG00673 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | CHS | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| HG00733 | hp1 | a0001 | c0001 | t0001 | g0004 | AMR | PUR | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| HG00733 | hp2 | a0001 | c0001 | t0001 | g0001 | AMR | PUR | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| HG00735 | hp1 | a0001 | c0001 | t0001 | g0001 | AMR | PUR | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| HG00735 | hp2 | a0001 | c0001 | t0002 | g0002 | AMR | PUR | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| HG00738 | hp1 | a0001 | c0001 | t0002 | g0002 | AMR | PUR | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| HG00741 | hp1 | a0001 | c0001 | t0001 | g0001 | AMR | PUR | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| HG00741 | hp2 | a0001 | c0001 | t0001 | g0001 | AMR | PUR | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| HG01069 | hp1 | a0001 | c0001 | t0001 | g0001 | AMR | PUR | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| HG01070 | hp1 | a0001 | c0001 | t0001 | g0001 | AMR | PUR | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| HG01070 | hp2 | a0001 | c0001 | t0001 | g0004 | AMR | PUR | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| HG01071 | hp1 | a0001 | c0001 | t0001 | g0004 | AMR | PUR | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| HG01071 | hp2 | a0001 | c0001 | t0001 | g0001 | AMR | PUR | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| HG01074 | hp1 | a0001 | c0001 | t0001 | g0001 | AMR | PUR | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| HG01081 | hp1 | a0001 | c0001 | t0001 | g0001 | AMR | PUR | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| HG01081 | hp2 | a0001 | c0001 | t0001 | g0001 | AMR | PUR | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| HG01099 | hp1 | a0001 | c0001 | t0001 | g0001 | AMR | PUR | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| HG01106 | hp1 | a0001 | c0001 | t0001 | g0004 | AMR | PUR | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| HG01109 | hp1 | a0001 | c0007 | t0002 | g0018 | AMR | PUR | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| HG01167 | hp1 | a0003 | c0003 | t0002 | g0005 | AMR | PUR | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| HG01168 | hp1 | a0001 | c0001 | t0001 | g0001 | AMR | PUR | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| HG01168 | hp2 | a0001 | c0001 | t0001 | g0001 | AMR | PUR | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| HG01169 | hp1 | a0003 | c0003 | t0002 | g0005 | AMR | PUR | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| HG01169 | hp2 | a0001 | c0001 | t0001 | g0001 | AMR | PUR | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| HG01175 | hp1 | a0001 | c0001 | t0001 | g0001 | AMR | PUR | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| HG01175 | hp2 | a0001 | c0001 | t0001 | g0001 | AMR | PUR | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| HG01192 | hp1 | a0001 | c0001 | t0001 | g0001 | AMR | PUR | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| HG01243 | hp1 | a0005 | c0006 | t0005 | g0010 | AMR | PUR | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| HG01255 | hp1 | a0002 | c0002 | t0002 | g0003 | AMR | CLM | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| HG01256 | hp1 | a0007 | c0008 | t0002 | g0019 | AMR | CLM | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| HG01257 | hp1 | a0001 | c0001 | t0001 | g0001 | AMR | CLM | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| HG01257 | hp2 | a0001 | c0001 | t0001 | g0001 | AMR | CLM | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| HG01258 | hp1 | a0001 | c0001 | t0001 | g0001 | AMR | CLM | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| HG01261 | hp1 | a0001 | c0001 | t0001 | g0001 | AMR | CLM | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| HG01346 | hp1 | a0001 | c0001 | t0001 | g0001 | AMR | CLM | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| HG01346 | hp2 | a0001 | c0001 | t0001 | g0001 | AMR | CLM | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| HG01358 | hp1 | a0001 | c0001 | t0001 | g0001 | AMR | CLM | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| HG01361 | hp1 | a0001 | c0001 | t0001 | g0001 | AMR | CLM | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| HG01361 | hp2 | a0001 | c0001 | t0001 | g0001 | AMR | CLM | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| HG01433 | hp1 | a0001 | c0001 | t0001 | g0001 | AMR | CLM | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| HG01515 | hp1 | a0001 | c0001 | t0001 | g0001 | EUR | IBS | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| HG01516 | hp1 | a0001 | c0001 | t0001 | g0001 | EUR | IBS | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| HG01516 | hp2 | a0002 | c0002 | t0002 | g0003 | EUR | IBS | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| HG01517 | hp1 | a0001 | c0001 | t0001 | g0001 | EUR | IBS | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| HG01517 | hp2 | a0002 | c0002 | t0002 | g0003 | EUR | IBS | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| HG01884 | hp1 | a0001 | c0001 | t0001 | g0001 | AFR | ACB | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| HG01884 | hp2 | a0001 | c0001 | t0002 | g0002 | AFR | ACB | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| HG01891 | hp1 | a0001 | c0001 | t0002 | g0002 | AFR | ACB | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| HG01891 | hp2 | a0001 | c0001 | t0004 | g0012 | AFR | ACB | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| HG01928 | hp1 | a0001 | c0001 | t0001 | g0001 | AMR | PEL | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| HG01934 | hp1 | a0001 | c0001 | t0001 | g0001 | AMR | PEL | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| HG01943 | hp1 | a0001 | c0001 | t0001 | g0001 | AMR | PEL | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| HG01952 | hp1 | a0001 | c0001 | t0001 | g0001 | AMR | PEL | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| HG01975 | hp1 | a0001 | c0001 | t0001 | g0001 | AMR | PEL | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| HG01975 | hp2 | a0001 | c0001 | t0001 | g0001 | AMR | PEL | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| HG01978 | hp1 | a0001 | c0001 | t0001 | g0001 | AMR | PEL | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| HG01978 | hp2 | a0001 | c0001 | t0001 | g0001 | AMR | PEL | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| HG01981 | hp1 | a0001 | c0001 | t0001 | g0001 | AMR | PEL | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| HG01981 | hp2 | a0001 | c0001 | t0001 | g0001 | AMR | PEL | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| HG01993 | hp1 | a0001 | c0001 | t0001 | g0001 | AMR | PEL | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| HG01993 | hp2 | a0001 | c0001 | t0001 | g0001 | AMR | PEL | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| HG02004 | hp1 | a0001 | c0001 | t0001 | g0001 | AMR | PEL | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| HG02004 | hp2 | a0001 | c0001 | t0001 | g0001 | AMR | PEL | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| HG02015 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | KHV | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| HG02027 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | KHV | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| HG02040 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | KHV | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| HG02055 | hp1 | a0001 | c0001 | t0002 | g0002 | AFR | ACB | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| HG02056 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | KHV | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| HG02071 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | KHV | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| HG02074 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | KHV | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| HG02080 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | KHV | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| HG02080 | hp2 | a0001 | c0001 | t0001 | g0001 | EAS | KHV | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| HG02083 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | KHV | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| HG02129 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | KHV | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| HG02132 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | KHV | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| HG02135 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | KHV | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| HG02145 | hp1 | a0001 | c0001 | t0002 | g0002 | AFR | ACB | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| HG02148 | hp1 | a0001 | c0001 | t0001 | g0001 | AMR | PEL | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| HG02148 | hp2 | a0001 | c0001 | t0001 | g0001 | AMR | PEL | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| HG02155 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | CDX | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| HG02155 | hp2 | a0002 | c0002 | t0002 | g0003 | EAS | CDX | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| HG02165 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | CDX | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| HG02165 | hp2 | a0001 | c0001 | t0001 | g0001 | EAS | CDX | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| HG02257 | hp1 | a0003 | c0003 | t0002 | g0005 | AFR | ACB | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| HG02257 | hp2 | a0001 | c0001 | t0003 | g0008 | AFR | ACB | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| HG02258 | hp1 | a0001 | c0001 | t0002 | g0007 | AFR | ACB | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| HG02273 | hp1 | a0006 | c0012 | t0001 | g0028 | AMR | PEL | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| HG02273 | hp2 | a0001 | c0001 | t0001 | g0001 | AMR | PEL | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| HG02280 | hp1 | a0001 | c0001 | t0001 | g0001 | AFR | ACB | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| HG02280 | hp2 | a0001 | c0001 | t0001 | g0001 | AFR | ACB | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| HG02293 | hp1 | a0001 | c0001 | t0001 | g0001 | AMR | PEL | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| HG02293 | hp2 | a0001 | c0001 | t0001 | g0001 | AMR | PEL | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| HG02300 | hp1 | a0001 | c0001 | t0001 | g0001 | AMR | PEL | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| HG02451 | hp1 | a0001 | c0001 | t0001 | g0001 | AFR | ACB | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| HG02451 | hp2 | a0001 | c0001 | t0002 | g0002 | AFR | ACB | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| HG02572 | hp1 | a0001 | c0001 | t0002 | g0002 | AFR | GWD | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| HG02602 | hp1 | a0001 | c0001 | t0001 | g0001 | SAS | PJL | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| HG02615 | hp1 | a0001 | c0001 | t0001 | g0001 | AFR | GWD | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| HG02615 | hp2 | a0001 | c0001 | t0002 | g0002 | AFR | GWD | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| HG02622 | hp1 | a0001 | c0001 | t0001 | g0001 | AFR | GWD | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| HG02622 | hp2 | a0001 | c0001 | t0003 | g0008 | AFR | GWD | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| HG02647 | hp1 | a0001 | c0001 | t0002 | g0002 | AFR | GWD | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| HG02683 | hp1 | a0001 | c0001 | t0001 | g0001 | SAS | PJL | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| HG02683 | hp2 | a0001 | c0001 | t0001 | g0001 | SAS | PJL | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| HG02698 | hp1 | a0001 | c0001 | t0001 | g0001 | SAS | PJL | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| HG02717 | hp1 | a0008 | c0011 | t0002 | g0025 | AFR | GWD | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| HG02723 | hp1 | a0001 | c0001 | t0003 | g0008 | AFR | GWD | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| HG02723 | hp2 | a0001 | c0001 | t0001 | g0001 | AFR | GWD | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| HG02735 | hp1 | a0001 | c0001 | t0001 | g0001 | SAS | PJL | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| HG02738 | hp1 | a0002 | c0002 | t0002 | g0003 | SAS | PJL | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| HG02809 | hp1 | a0001 | c0001 | t0002 | g0002 | AFR | GWD | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| HG02809 | hp2 | a0001 | c0001 | t0001 | g0001 | AFR | GWD | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| HG02818 | hp1 | a0001 | c0001 | t0001 | g0001 | AFR | GWD | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| HG02818 | hp2 | a0001 | c0001 | t0002 | g0002 | AFR | GWD | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| HG02886 | hp1 | a0002 | c0002 | t0002 | g0003 | AFR | GWD | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| HG02886 | hp2 | a0001 | c0001 | t0002 | g0002 | AFR | GWD | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| HG02895 | hp1 | a0001 | c0001 | t0001 | g0001 | AFR | GWD | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| HG02896 | hp1 | a0001 | c0001 | t0002 | g0007 | AFR | GWD | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| HG02896 | hp2 | a0002 | c0002 | t0002 | g0003 | AFR | GWD | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| HG02897 | hp1 | a0002 | c0002 | t0002 | g0003 | AFR | GWD | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| HG02897 | hp2 | a0001 | c0001 | t0001 | g0001 | AFR | GWD | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| HG02922 | hp1 | a0001 | c0001 | t0001 | g0001 | AFR | ESN | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| HG02922 | hp2 | a0002 | c0002 | t0002 | g0003 | AFR | ESN | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| HG02965 | hp1 | a0002 | c0002 | t0009 | g0026 | AFR | ESN | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| HG03017 | hp1 | a0001 | c0001 | t0001 | g0001 | SAS | PJL | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| HG03041 | hp1 | a0001 | c0001 | t0001 | g0001 | AFR | GWD | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| HG03041 | hp2 | a0001 | c0001 | t0002 | g0002 | AFR | GWD | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| HG03098 | hp1 | a0001 | c0001 | t0002 | g0002 | AFR | MSL | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| HG03130 | hp1 | a0001 | c0001 | t0002 | g0002 | AFR | ESN | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| HG03139 | hp1 | a0001 | c0001 | t0002 | g0002 | AFR | ESN | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| HG03195 | hp1 | a0001 | c0001 | t0001 | g0001 | AFR | ESN | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| HG03195 | hp2 | a0001 | c0001 | t0001 | g0001 | AFR | ESN | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| HG03209 | hp1 | a0001 | c0001 | t0001 | g0001 | AFR | MSL | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| HG03225 | hp1 | a0001 | c0001 | t0004 | g0009 | AFR | MSL | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| HG03453 | hp1 | a0001 | c0001 | t0002 | g0007 | AFR | MSL | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| HG03453 | hp2 | a0001 | c0001 | t0002 | g0002 | AFR | MSL | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| HG03486 | hp1 | a0001 | c0001 | t0001 | g0001 | AFR | MSL | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| HG03486 | hp2 | a0002 | c0002 | t0002 | g0003 | AFR | MSL | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| HG03490 | hp1 | a0001 | c0001 | t0001 | g0001 | SAS | PJL | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| HG03491 | hp1 | a0010 | c0009 | t0001 | g0022 | SAS | PJL | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| HG03491 | hp2 | a0001 | c0001 | t0001 | g0001 | SAS | PJL | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| HG03492 | hp1 | a0001 | c0001 | t0001 | g0001 | SAS | PJL | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| HG03516 | hp1 | a0001 | c0001 | t0006 | g0016 | AFR | ESN | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| HG03516 | hp2 | a0005 | c0006 | t0005 | g0010 | AFR | ESN | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| HG03579 | hp1 | a0001 | c0001 | t0001 | g0001 | AFR | MSL | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| HG03654 | hp1 | a0002 | c0002 | t0002 | g0003 | SAS | PJL | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| HG03688 | hp1 | a0001 | c0001 | t0001 | g0001 | SAS | STU | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| HG03704 | hp1 | a0001 | c0001 | t0001 | g0001 | SAS | PJL | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| HG03704 | hp2 | a0001 | c0001 | t0001 | g0001 | SAS | PJL | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| HG03710 | hp1 | a0001 | c0001 | t0001 | g0001 | SAS | PJL | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| HG03831 | hp1 | a0001 | c0001 | t0001 | g0004 | SAS | BEB | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| HG03831 | hp2 | a0001 | c0001 | t0001 | g0001 | SAS | BEB | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| HG03927 | hp1 | a0001 | c0001 | t0001 | g0001 | SAS | BEB | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| HG03927 | hp2 | a0001 | c0001 | t0001 | g0001 | SAS | BEB | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| HG03942 | hp1 | a0001 | c0001 | t0001 | g0001 | SAS | BEB | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| HG04115 | hp1 | a0001 | c0001 | t0001 | g0001 | SAS | STU | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| HG04199 | hp1 | a0001 | c0001 | t0001 | g0001 | SAS | STU | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| HG04204 | hp1 | a0001 | c0001 | t0002 | g0002 | SAS | STU | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| HG04228 | hp1 | a0001 | c0001 | t0001 | g0001 | SAS | STU | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| NA18522 | hp1 | a0003 | c0003 | t0002 | g0005 | AFR | YRI | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| NA18612 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | CHB | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| NA18747 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | CHB | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| NA18939 | hp1 | a0001 | c0004 | t0001 | g0006 | EAS | JPT | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| NA18939 | hp2 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| NA18940 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| NA18941 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| NA18941 | hp2 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| NA18943 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| NA18944 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| NA18945 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| NA18946 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| NA18946 | hp2 | a0001 | c0004 | t0001 | g0006 | EAS | JPT | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| NA18948 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| NA18949 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| NA18949 | hp2 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| NA18950 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| NA18950 | hp2 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| NA18951 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| NA18951 | hp2 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| NA18952 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| NA18953 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| NA18956 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| NA18956 | hp2 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| NA18957 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| NA18957 | hp2 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| NA18959 | hp1 | a0001 | c0001 | t0002 | g0002 | EAS | JPT | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| NA18960 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| NA18961 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| NA18962 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| NA18964 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| NA18964 | hp2 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| NA18965 | hp1 | a0001 | c0001 | t0001 | g0004 | EAS | JPT | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| NA18966 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| NA18967 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| NA18968 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| NA18968 | hp2 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| NA18969 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| NA18969 | hp2 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| NA18970 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| NA18971 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| NA18972 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| NA18972 | hp2 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| NA18974 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| NA18975 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| NA18975 | hp2 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| NA18977 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| NA18978 | hp1 | a0001 | c0001 | t0010 | g0023 | EAS | JPT | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| NA18978 | hp2 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| NA18980 | hp1 | a0001 | c0004 | t0001 | g0006 | EAS | JPT | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| NA18980 | hp2 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| NA18981 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| NA18981 | hp2 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| NA18982 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| NA18983 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| NA18984 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| NA18985 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| NA18986 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| NA18988 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| NA18989 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| NA18990 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| NA18993 | hp1 | a0004 | c0005 | t0008 | g0020 | EAS | JPT | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| NA18993 | hp2 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| NA18994 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| NA18995 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| NA18998 | hp1 | a0001 | c0004 | t0001 | g0006 | EAS | JPT | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| NA18998 | hp2 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| NA19000 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| NA19001 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| NA19001 | hp2 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| NA19003 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| NA19003 | hp2 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| NA19004 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| NA19005 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| NA19006 | hp1 | a0004 | c0005 | t0002 | g0021 | EAS | JPT | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| NA19007 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| NA19009 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| NA19011 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| NA19011 | hp2 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| NA19012 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| NA19030 | hp1 | a0001 | c0001 | t0004 | g0009 | AFR | LWK | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| NA19030 | hp2 | a0001 | c0001 | t0002 | g0002 | AFR | LWK | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| NA19043 | hp1 | a0001 | c0001 | t0001 | g0030 | AFR | LWK | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| NA19055 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| NA19056 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| NA19057 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| NA19057 | hp2 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| NA19058 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| NA19059 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| NA19059 | hp2 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| NA19060 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| NA19062 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| NA19063 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| NA19064 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| NA19064 | hp2 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| NA19065 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| NA19065 | hp2 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| NA19066 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| NA19067 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| NA19068 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| NA19070 | hp1 | a0001 | c0001 | t0001 | g0011 | EAS | JPT | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| NA19072 | hp1 | a0001 | c0001 | t0012 | g0014 | EAS | JPT | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| NA19074 | hp1 | a0001 | c0001 | t0001 | g0004 | EAS | JPT | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| NA19074 | hp2 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| NA19075 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| NA19076 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| NA19077 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| NA19077 | hp2 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| NA19078 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| NA19078 | hp2 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| NA19079 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| NA19081 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| NA19081 | hp2 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| NA19082 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| NA19083 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| NA19084 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| NA19084 | hp2 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| NA19085 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| NA19086 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| NA19088 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| NA19089 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| NA19091 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| NA20129 | hp1 | a0001 | c0001 | t0001 | g0001 | AFR | ASW | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| NA20129 | hp2 | a0001 | c0001 | t0001 | g0015 | AFR | ASW | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| NA20752 | hp1 | a0002 | c0002 | t0002 | g0003 | EUR | TSI | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| NA20805 | hp1 | a0001 | c0001 | t0001 | g0004 | EUR | TSI | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| NA20905 | hp1 | a0001 | c0001 | t0001 | g0001 | SAS | GIH | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| HG01123 | hp1 | a0001 | c0001 | t0001 | g0001 | AMR | CLM | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| HG01123 | hp2 | a0001 | c0001 | t0001 | g0001 | AMR | CLM | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| HG02109 | hp1 | a0001 | c0001 | t0001 | g0001 | AFR | ACB | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| HG02109 | hp2 | a0001 | c0001 | t0002 | g0013 | AFR | ACB | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| HG02486 | hp1 | a0002 | c0002 | t0002 | g0003 | AFR | ACB | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| HG03471 | hp1 | a0001 | c0001 | t0002 | g0002 | AFR | MSL | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| HG06807 | hp1 | a0001 | c0001 | t0002 | g0002 | AFR | USA | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| HG06807 | hp2 | a0003 | c0003 | t0002 | g0005 | AFR | USA | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| NA18955 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| NA20300 | hp1 | a0002 | c0002 | t0002 | g0003 | AFR | USA | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| NA20300 | hp2 | a0001 | c0001 | t0001 | g0001 | AFR | USA | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| NA21309 | hp1 | a0001 | c0001 | t0001 | g0001 | AFR | LWK | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| NA21309 | hp2 | a0001 | c0001 | t0001 | g0001 | AFR | LWK | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| homoSapiens_chm13v2 | hp1 | a0001 | c0001 | t0001 | g0001 | REF | REF | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| homoSapiens_grch38 | hp1 | a0001 | c0001 | t0001 | g0004 | REF | REF | RTL3_chrX_78651068_78664328 | RTL3 | chrX | 78651068 | 78664328 |
| chr:pos | ref | alt | # # of ahapid:amino-acid(protein) level |
ahapids | # # of haplotypeids |
haplotypeids | annotation | impact | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length |
cds cds pos length |
aa aa pos length |
distance | status | chr | pos |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| chrX:78657009
|
A | G | 1 | a0010 | 1 | HG03491.hp1 | missense_variant | MODERATE | c.1412T>C | p.Ile471Thr | RTL3 | ENSG00000179300.4 | transcript | ENST00000321110.2 | protein_coding | 2/2 | 1708/2649 | 1412/1428 | 471/475 | chrX | 78657009 | ||
| chrX:78657109
|
G | A | 1 | a0005 | 2 | HG01243.hp1 HG03516.hp2 |
missense_variant | MODERATE | c.1312C>T | p.Arg438Cys | RTL3 | ENSG00000179300.4 | transcript | ENST00000321110.2 | protein_coding | 2/2 | 1608/2649 | 1312/1428 | 438/475 | chrX | 78657109 | ||
| chrX:78657726
|
T | G | 1 | a0009 | 1 | HG00597.hp2 | missense_variant | MODERATE | c.695A>C | p.Glu232Ala | RTL3 | ENSG00000179300.4 | transcript | ENST00000321110.2 | protein_coding | 2/2 | 991/2649 | 695/1428 | 232/475 | chrX | 78657726 | ||
| chrX:78657899
|
C | A | 1 | a0008 | 1 | HG02717.hp1 | missense_variant | MODERATE | c.522G>T | p.Gln174His | RTL3 | ENSG00000179300.4 | transcript | ENST00000321110.2 | protein_coding | 2/2 | 818/2649 | 522/1428 | 174/475 | chrX | 78657899 | ||
| chrX:78657932
|
A | T | 1 | a0004 | 2 | NA18993.hp1 NA19006.hp1 |
missense_variant | MODERATE | c.489T>A | p.Asn163Lys | RTL3 | ENSG00000179300.4 | transcript | ENST00000321110.2 | protein_coding | 2/2 | 785/2649 | 489/1428 | 163/475 | chrX | 78657932 | ||
| chrX:78657969
|
TG | T | 1 | a0007 | 1 | HG01256.hp1 | frameshift_variant | HIGH | c.451delC | p.Gln151fs | RTL3 | ENSG00000179300.4 | transcript | ENST00000321110.2 | protein_coding | 2/2 | 747/2649 | 451/1428 | 151/475 | chrX | 78657969 | ||
| chrX:78658060
|
G | A | 1 | a0003 | 5 | HG01167.hp1 HG01169.hp1 HG02257.hp1 others(2): Show |
missense_variant | MODERATE | c.361C>T | p.Arg121Trp | RTL3 | ENSG00000179300.4 | transcript | ENST00000321110.2 | protein_coding | 2/2 | 657/2649 | 361/1428 | 121/475 | chrX | 78658060 | ||
| chrX:78658072
|
G | A | 2 | a0002a0003 | 22 | HG00140.hp1 HG00642.hp1 HG01167.hp1 others(19): Show |
missense_variant | MODERATE | c.349C>T | p.Pro117Ser | RTL3 | ENSG00000179300.4 | transcript | ENST00000321110.2 | protein_coding | 2/2 | 645/2649 | 349/1428 | 117/475 | chrX | 78658072 | ||
| chrX:78658264
|
G | A | 1 | a0006 | 1 | HG02273.hp1 | stop_gained | HIGH | c.157C>T | p.Arg53* | RTL3 | ENSG00000179300.4 | transcript | ENST00000321110.2 | protein_coding | 2/2 | 453/2649 | 157/1428 | 53/475 | chrX | 78658264 |
| chr:pos | ref | alt | # # of chapid |
chapids | # # of haplotypeids |
haplotypeids | annotation | impact | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length |
cds cds pos length |
aa aa pos length |
distance | status | chr | pos |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| chrX:78657983
|
A | G | 1 | a0001c0004 | 4 | NA18939.hp1 NA18946.hp2 NA18980.hp1 others(1): Show |
synonymous_variant | LOW | c.438T>C | p.Asp146Asp | RTL3 | ENSG00000179300.4 | transcript | ENST00000321110.2 | protein_coding | 2/2 | 734/2649 | 438/1428 | 146/475 | chrX | 78657983 | ||
| chrX:78658366
|
G | T | 1 | a0001c0007 | 1 | HG01109.hp1 | synonymous_variant | LOW | c.55C>A | p.Arg19Arg | RTL3 | ENSG00000179300.4 | transcript | ENST00000321110.2 | protein_coding | 2/2 | 351/2649 | 55/1428 | 19/475 | chrX | 78658366 |
| chr:pos | ref | alt | # # of thapid:transcript level |
thapids | # # of haplotypeids |
haplotypeids | annotation | impact | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length |
cds cds pos length |
aa aa pos length |
distance | status | chr | pos |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| chrX:78656316
|
G | GA | 11 | a0001c0001t0002a0001c0001t0003a0001c0001t0006others(8): Show | 58 | HG00140.hp1 HG00323.hp2 HG00642.hp1 others(55): Show |
3_prime_UTR_variant | MODIFIER | c.*676dupT | RTL3 | ENSG00000179300.4 | transcript | ENST00000321110.2 | protein_coding | 2/2 | 676 | chrX | 78656316 | |||||
| chrX:78656316
|
G | GAA | 2 | a0002c0002t0009a0005c0006t0005 | 3 | HG01243.hp1 HG02965.hp1 HG03516.hp2 |
3_prime_UTR_variant | MODIFIER | c.*675_*676dupTT | RTL3 | ENSG00000179300.4 | transcript | ENST00000321110.2 | protein_coding | 2/2 | 676 | chrX | 78656316 | |||||
| chrX:78656377
|
T | C | 1 | a0001c0001t0003 | 3 | HG02257.hp2 HG02622.hp2 HG02723.hp1 |
3_prime_UTR_variant | MODIFIER | c.*616A>G | RTL3 | ENSG00000179300.4 | transcript | ENST00000321110.2 | protein_coding | 2/2 | 616 | chrX | 78656377 | |||||
| chrX:78656412
|
A | T | 1 | a0004c0005t0008 | 1 | NA18993.hp1 | 3_prime_UTR_variant | MODIFIER | c.*581T>A | RTL3 | ENSG00000179300.4 | transcript | ENST00000321110.2 | protein_coding | 2/2 | 581 | chrX | 78656412 | |||||
| chrX:78656476
|
GA | G | 1 | a0001c0001t0010 | 1 | NA18978.hp1 | 3_prime_UTR_variant | MODIFIER | c.*516delT | RTL3 | ENSG00000179300.4 | transcript | ENST00000321110.2 | protein_coding | 2/2 | 516 | chrX | 78656476 | |||||
| chrX:78656527
|
C | T | 1 | a0005c0006t0005 | 2 | HG01243.hp1 HG03516.hp2 |
3_prime_UTR_variant | MODIFIER | c.*466G>A | RTL3 | ENSG00000179300.4 | transcript | ENST00000321110.2 | protein_coding | 2/2 | 466 | chrX | 78656527 | |||||
| chrX:78656690
|
C | T | 1 | a0001c0001t0004 | 3 | HG01891.hp2 HG03225.hp1 NA19030.hp1 |
3_prime_UTR_variant | MODIFIER | c.*303G>A | RTL3 | ENSG00000179300.4 | transcript | ENST00000321110.2 | protein_coding | 2/2 | 303 | chrX | 78656690 | |||||
| chrX:78656952
|
G | GA | 1 | a0001c0001t0010 | 1 | NA18978.hp1 | 3_prime_UTR_variant | MODIFIER | c.*40_*41insT | RTL3 | ENSG00000179300.4 | transcript | ENST00000321110.2 | protein_coding | 2/2 | 40 | chrX | 78656952 | |||||
| chrX:78656981
|
G | A | 1 | a0002c0002t0011 | 1 | HG00140.hp1 | 3_prime_UTR_variant | MODIFIER | c.*12C>T | RTL3 | ENSG00000179300.4 | transcript | ENST00000321110.2 | protein_coding | 2/2 | 12 | chrX | 78656981 | |||||
| chrX:78656987
|
T | TC | 1 | a0001c0001t0012 | 1 | NA19072.hp1 | 3_prime_UTR_variant | MODIFIER | c.*5dupG | RTL3 | ENSG00000179300.4 | transcript | ENST00000321110.2 | protein_coding | 2/2 | 5 | chrX | 78656987 | |||||
| chrX:78658424
|
TTGAGGAA others(1): Show |
T | 1 | a0001c0001t0007 | 1 | HG00597.hp1 | 5_prime_UTR_variant | MODIFIER | c.-12_-5delTTTCCTCA | RTL3 | ENSG00000179300.4 | transcript | ENST00000321110.2 | protein_coding | 2/2 | 5 | chrX | 78658424 | |||||
| chrX:78658470
|
G | C | 1 | a0001c0001t0013 | 1 | HG00621.hp1 | 5_prime_UTR_variant | MODIFIER | c.-50C>G | RTL3 | ENSG00000179300.4 | transcript | ENST00000321110.2 | protein_coding | 2/2 | 50 | chrX | 78658470 | |||||
| chrX:78658547
|
A | T | 1 | a0001c0001t0006 | 1 | HG03516.hp1 | 5_prime_UTR_variant | MODIFIER | c.-127T>A | RTL3 | ENSG00000179300.4 | transcript | ENST00000321110.2 | protein_coding | 2/2 | 127 | chrX | 78658547 | |||||
| chrX:78658557
|
C | T | 1 | a0001c0001t0003 | 3 | HG02257.hp2 HG02622.hp2 HG02723.hp1 |
5_prime_UTR_variant | MODIFIER | c.-137G>A | RTL3 | ENSG00000179300.4 | transcript | ENST00000321110.2 | protein_coding | 2/2 | 137 | chrX | 78658557 |
| chr:pos | ref | alt | # # of ghapid:genebody level |
ghapids | # # of haplotypeids |
haplotypeids | annotation | impact | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | genebody_biotype | rank | cdna cdna pos length |
cds cds pos length |
aa aa pos length |
distance | status | chr | pos |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| chrX:78658652
|
C | A | 1 | a0001c0001t0001g0030 | 1 | NA19043.hp1 | splice_region_variant&intron_variant | LOW | c.-228-4G>T | RTL3 | ENSG00000179300.4 | transcript | ENST00000321110.2 | protein_coding | 1/1 | chrX | 78658652 | ||||||
| chrX:78658991
|
A | T | 1 | a0001c0001t0001g0015 | 1 | NA20129.hp2 | intron_variant | MODIFIER | c.-229+270T>A | RTL3 | ENSG00000179300.4 | transcript | ENST00000321110.2 | protein_coding | 1/1 | chrX | 78658991 | ||||||
| chrX:78659151
|
C | T | 2 | a0001c0001t0002g0007a0001c0001t0004g0012 | 4 | HG01891.hp2 HG02258.hp1 HG02896.hp1 others(1): Show |
intron_variant | MODIFIER | c.-229+110G>A | RTL3 | ENSG00000179300.4 | transcript | ENST00000321110.2 | protein_coding | 1/1 | chrX | 78659151 | ||||||
| chrX:78659157
|
AAT | A | 25 | a0001c0001t0001g0001a0001c0001t0001g0011a0001c0001t0001g0015others(22): Show | 307 | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(304): Show |
intron_variant | MODIFIER | c.-229+102_-229+103d others(4): Show |
RTL3 | ENSG00000179300.4 | transcript | ENST00000321110.2 | protein_coding | 1/1 | chrX | 78659157 | ||||||
| chrX:78659198
|
T | C | 1 | a0001c0001t0001g0011 | 2 | HG00408.hp1 NA19070.hp1 |
intron_variant | MODIFIER | c.-229+63A>G | RTL3 | ENSG00000179300.4 | transcript | ENST00000321110.2 | protein_coding | 1/1 | chrX | 78659198 |