Joint Open Genome and Omics Platform (JoGo)

Search by Genic region

geneid	100132994
ensemblid	ENSG00000215113.7
hgncid	34229
symbol	CXorf49B
name	chromosome X open reading frame 49B
refseq_nuc	NM_001145139.2
refseq_prot	NP_001138611.1
ensembl_nuc	ENST00000542739.3
ensembl_prot	ENSP00000482270.1
mane_status	MANE Select
chr	chrX
start	71763349
end	71767204
strand	+
ver	v1.2
region	chrX:71763349-71767204
region5000	chrX:71758349-71772204
regionname0	CXorf49B_chrX_71763349_71767204
regionname5000	CXorf49B_chrX_71758349_71772204

ahapid	grch38/ chm13v2	alen	total	AFR	AMR	EAS	EUR	SAS	JPT	regionname	genename	aa	chr	start	end
a0001	0/0	514	59	12	18	14	7	8	8	CXorf49B_chrX_71758349_71772204	CXorf49B	copy fasta	chrX	71758349	71772204
a0002	0/0	514	19	8	2	7	0	2	6	CXorf49B_chrX_71758349_71772204	CXorf49B	copy fasta	chrX	71758349	71772204
a0003	0/0	514	10	4	1	3	0	2	2	CXorf49B_chrX_71758349_71772204	CXorf49B	copy fasta	chrX	71758349	71772204
a0004	0/0	514	2	0	0	2	0	0	2	CXorf49B_chrX_71758349_71772204	CXorf49B	copy fasta	chrX	71758349	71772204
a0005	0/0	500	1	0	0	1	0	0	1	CXorf49B_chrX_71758349_71772204	CXorf49B	copy fasta	chrX	71758349	71772204
a0006	0/0	514	1	0	0	1	0	0	1	CXorf49B_chrX_71758349_71772204	CXorf49B	copy fasta	chrX	71758349	71772204
a0007	0/0	514	1	1	0	0	0	0	0	CXorf49B_chrX_71758349_71772204	CXorf49B	copy fasta	chrX	71758349	71772204
a0008	0/0	514	1	1	0	0	0	0	0	CXorf49B_chrX_71758349_71772204	CXorf49B	copy fasta	chrX	71758349	71772204
a0009	0/0	65	1	0	0	1	0	0	1	CXorf49B_chrX_71758349_71772204	CXorf49B	copy fasta	chrX	71758349	71772204

chapid	grch38/ chm13v2	clen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	cseq	chr	start	end
c0001	0/0	1545	56	9	18	14	7	8	CXorf49B_chrX_71758349_71772204	CXorf49B	copy fasta	chrX	71758349	71772204
c0002	0/0	1545	19	8	2	7	0	2	CXorf49B_chrX_71758349_71772204	CXorf49B	copy fasta	chrX	71758349	71772204
c0003	0/0	1545	10	4	1	3	0	2	CXorf49B_chrX_71758349_71772204	CXorf49B	copy fasta	chrX	71758349	71772204
c0004	0/0	1545	3	3	0	0	0	0	CXorf49B_chrX_71758349_71772204	CXorf49B	copy fasta	chrX	71758349	71772204
c0005	0/0	1545	2	0	0	2	0	0	CXorf49B_chrX_71758349_71772204	CXorf49B	copy fasta	chrX	71758349	71772204
c0006	0/0	1545	1	1	0	0	0	0	CXorf49B_chrX_71758349_71772204	CXorf49B	copy fasta	chrX	71758349	71772204
c0007	0/0	1546	1	0	0	1	0	0	CXorf49B_chrX_71758349_71772204	CXorf49B	copy fasta	chrX	71758349	71772204
c0008	0/0	1545	1	1	0	0	0	0	CXorf49B_chrX_71758349_71772204	CXorf49B	copy fasta	chrX	71758349	71772204
c0009	0/0	1544	1	0	0	1	0	0	CXorf49B_chrX_71758349_71772204	CXorf49B	copy fasta	chrX	71758349	71772204
c0010	0/0	1545	1	0	0	1	0	0	CXorf49B_chrX_71758349_71772204	CXorf49B	copy fasta	chrX	71758349	71772204

thapid	grch38 chm13v2	tlen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	tseq	chr	start	end
t0001	0/0	250	95	26	21	29	7	12	CXorf49B_chrX_71758349_71772204	CXorf49B	copy fasta	chrX	71758349	71772204

ghapid	grch38/ chm13v2	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	chr	start	end
g0001	0/0	80	20	18	24	6	12	CXorf49B_chrX_71758349_71772204	CXorf49B	chrX	71758349	71772204
g0002	0/0	3	2	1	0	0	0	CXorf49B_chrX_71758349_71772204	CXorf49B	chrX	71758349	71772204
g0003	0/0	3	0	0	3	0	0	CXorf49B_chrX_71758349_71772204	CXorf49B	chrX	71758349	71772204
g0004	0/0	2	0	1	0	1	0	CXorf49B_chrX_71758349_71772204	CXorf49B	chrX	71758349	71772204
g0005	0/0	2	2	0	0	0	0	CXorf49B_chrX_71758349_71772204	CXorf49B	chrX	71758349	71772204
g0006	0/0	1	1	0	0	0	0	CXorf49B_chrX_71758349_71772204	CXorf49B	chrX	71758349	71772204
g0007	0/0	1	0	0	1	0	0	CXorf49B_chrX_71758349_71772204	CXorf49B	chrX	71758349	71772204
g0008	0/0	1	0	0	1	0	0	CXorf49B_chrX_71758349_71772204	CXorf49B	chrX	71758349	71772204
g0009	0/0	1	0	1	0	0	0	CXorf49B_chrX_71758349_71772204	CXorf49B	chrX	71758349	71772204
g0010	0/0	1	1	0	0	0	0	CXorf49B_chrX_71758349_71772204	CXorf49B	chrX	71758349	71772204

achapid	grch38/ chm13v2	clen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	cseq	chr	start	end
a0001c0001	0/0	1545	56	9	18	14	7	8	CXorf49B_chrX_71758349_71772204	CXorf49B	copy fasta	chrX	71758349	71772204
a0001c0004	0/0	1545	3	3	0	0	0	0	CXorf49B_chrX_71758349_71772204	CXorf49B	copy fasta	chrX	71758349	71772204
a0002c0002	0/0	1545	19	8	2	7	0	2	CXorf49B_chrX_71758349_71772204	CXorf49B	copy fasta	chrX	71758349	71772204
a0003c0003	0/0	1545	10	4	1	3	0	2	CXorf49B_chrX_71758349_71772204	CXorf49B	copy fasta	chrX	71758349	71772204
a0004c0005	0/0	1545	2	0	0	2	0	0	CXorf49B_chrX_71758349_71772204	CXorf49B	copy fasta	chrX	71758349	71772204
a0005c0009	0/0	1544	1	0	0	1	0	0	CXorf49B_chrX_71758349_71772204	CXorf49B	copy fasta	chrX	71758349	71772204
a0006c0010	0/0	1545	1	0	0	1	0	0	CXorf49B_chrX_71758349_71772204	CXorf49B	copy fasta	chrX	71758349	71772204
a0007c0006	0/0	1545	1	1	0	0	0	0	CXorf49B_chrX_71758349_71772204	CXorf49B	copy fasta	chrX	71758349	71772204
a0008c0008	0/0	1545	1	1	0	0	0	0	CXorf49B_chrX_71758349_71772204	CXorf49B	copy fasta	chrX	71758349	71772204
a0009c0007	0/0	1546	1	0	0	1	0	0	CXorf49B_chrX_71758349_71772204	CXorf49B	copy fasta	chrX	71758349	71772204

acthapid	grch38 chm13v2	tlen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	tseq	chr	start	end
a0001c0001t0001	0/0	1794	56	9	18	14	7	8	CXorf49B_chrX_71758349_71772204	CXorf49B	copy fasta	chrX	71758349	71772204
a0001c0004t0001	0/0	1794	3	3	0	0	0	0	CXorf49B_chrX_71758349_71772204	CXorf49B	copy fasta	chrX	71758349	71772204
a0002c0002t0001	0/0	1794	19	8	2	7	0	2	CXorf49B_chrX_71758349_71772204	CXorf49B	copy fasta	chrX	71758349	71772204
a0003c0003t0001	0/0	1794	10	4	1	3	0	2	CXorf49B_chrX_71758349_71772204	CXorf49B	copy fasta	chrX	71758349	71772204
a0004c0005t0001	0/0	1794	2	0	0	2	0	0	CXorf49B_chrX_71758349_71772204	CXorf49B	copy fasta	chrX	71758349	71772204
a0005c0009t0001	0/0	1793	1	0	0	1	0	0	CXorf49B_chrX_71758349_71772204	CXorf49B	copy fasta	chrX	71758349	71772204
a0006c0010t0001	0/0	1794	1	0	0	1	0	0	CXorf49B_chrX_71758349_71772204	CXorf49B	copy fasta	chrX	71758349	71772204
a0007c0006t0001	0/0	1794	1	1	0	0	0	0	CXorf49B_chrX_71758349_71772204	CXorf49B	copy fasta	chrX	71758349	71772204
a0008c0008t0001	0/0	1794	1	1	0	0	0	0	CXorf49B_chrX_71758349_71772204	CXorf49B	copy fasta	chrX	71758349	71772204
a0009c0007t0001	0/0	1795	1	0	0	1	0	0	CXorf49B_chrX_71758349_71772204	CXorf49B	copy fasta	chrX	71758349	71772204

actghapid	grch38/ chm13v2	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	chr	start	end
a0001c0001t0001g0001	0/0	51	8	16	13	6	8	CXorf49B_chrX_71758349_71772204	CXorf49B	chrX	71758349	71772204
a0001c0001t0001g0004	0/0	2	0	1	0	1	0	CXorf49B_chrX_71758349_71772204	CXorf49B	chrX	71758349	71772204
a0001c0001t0001g0008	0/0	1	0	0	1	0	0	CXorf49B_chrX_71758349_71772204	CXorf49B	chrX	71758349	71772204
a0001c0001t0001g0009	0/0	1	0	1	0	0	0	CXorf49B_chrX_71758349_71772204	CXorf49B	chrX	71758349	71772204
a0001c0001t0001g0010	0/0	1	1	0	0	0	0	CXorf49B_chrX_71758349_71772204	CXorf49B	chrX	71758349	71772204
a0001c0004t0001g0001	0/0	1	1	0	0	0	0	CXorf49B_chrX_71758349_71772204	CXorf49B	chrX	71758349	71772204
a0001c0004t0001g0005	0/0	2	2	0	0	0	0	CXorf49B_chrX_71758349_71772204	CXorf49B	chrX	71758349	71772204
a0002c0002t0001g0001	0/0	16	6	1	7	0	2	CXorf49B_chrX_71758349_71772204	CXorf49B	chrX	71758349	71772204
a0002c0002t0001g0002	0/0	3	2	1	0	0	0	CXorf49B_chrX_71758349_71772204	CXorf49B	chrX	71758349	71772204
a0003c0003t0001g0001	0/0	10	4	1	3	0	2	CXorf49B_chrX_71758349_71772204	CXorf49B	chrX	71758349	71772204
a0004c0005t0001g0003	0/0	2	0	0	2	0	0	CXorf49B_chrX_71758349_71772204	CXorf49B	chrX	71758349	71772204
a0005c0009t0001g0003	0/0	1	0	0	1	0	0	CXorf49B_chrX_71758349_71772204	CXorf49B	chrX	71758349	71772204
a0006c0010t0001g0001	0/0	1	0	0	1	0	0	CXorf49B_chrX_71758349_71772204	CXorf49B	chrX	71758349	71772204
a0007c0006t0001g0001	0/0	1	1	0	0	0	0	CXorf49B_chrX_71758349_71772204	CXorf49B	chrX	71758349	71772204
a0008c0008t0001g0006	0/0	1	1	0	0	0	0	CXorf49B_chrX_71758349_71772204	CXorf49B	chrX	71758349	71772204
a0009c0007t0001g0007	0/0	1	0	0	1	0	0	CXorf49B_chrX_71758349_71772204	CXorf49B	chrX	71758349	71772204

sampleid	ID haplotypeid	ahapid	chapid	thapid	ghapid	gpopname	popname	regionname	genename	chr	start	end
HG00099	hp1	a0001	c0001	t0001	g0004	EUR	GBR	CXorf49B_chrX_71758349_71772204	CXorf49B	chrX	71758349	71772204
HG00099	hp2	a0001	c0001	t0001	g0001	EUR	GBR	CXorf49B_chrX_71758349_71772204	CXorf49B	chrX	71758349	71772204
HG00280	hp1	a0001	c0001	t0001	g0001	EUR	FIN	CXorf49B_chrX_71758349_71772204	CXorf49B	chrX	71758349	71772204
HG00621	hp1	a0001	c0001	t0001	g0001	EAS	CHS	CXorf49B_chrX_71758349_71772204	CXorf49B	chrX	71758349	71772204
HG00642	hp1	a0001	c0001	t0001	g0001	AMR	PUR	CXorf49B_chrX_71758349_71772204	CXorf49B	chrX	71758349	71772204
HG00738	hp1	a0001	c0001	t0001	g0001	AMR	PUR	CXorf49B_chrX_71758349_71772204	CXorf49B	chrX	71758349	71772204
HG00741	hp1	a0002	c0002	t0001	g0002	AMR	PUR	CXorf49B_chrX_71758349_71772204	CXorf49B	chrX	71758349	71772204
HG00741	hp2	a0001	c0001	t0001	g0009	AMR	PUR	CXorf49B_chrX_71758349_71772204	CXorf49B	chrX	71758349	71772204
HG01071	hp1	a0001	c0001	t0001	g0001	AMR	PUR	CXorf49B_chrX_71758349_71772204	CXorf49B	chrX	71758349	71772204
HG01071	hp2	a0001	c0001	t0001	g0001	AMR	PUR	CXorf49B_chrX_71758349_71772204	CXorf49B	chrX	71758349	71772204
HG01081	hp1	a0001	c0001	t0001	g0001	AMR	PUR	CXorf49B_chrX_71758349_71772204	CXorf49B	chrX	71758349	71772204
HG01081	hp2	a0001	c0001	t0001	g0001	AMR	PUR	CXorf49B_chrX_71758349_71772204	CXorf49B	chrX	71758349	71772204
HG01106	hp1	a0001	c0001	t0001	g0004	AMR	PUR	CXorf49B_chrX_71758349_71772204	CXorf49B	chrX	71758349	71772204
HG01168	hp1	a0001	c0001	t0001	g0001	AMR	PUR	CXorf49B_chrX_71758349_71772204	CXorf49B	chrX	71758349	71772204
HG01168	hp2	a0001	c0001	t0001	g0001	AMR	PUR	CXorf49B_chrX_71758349_71772204	CXorf49B	chrX	71758349	71772204
HG01346	hp1	a0003	c0003	t0001	g0001	AMR	CLM	CXorf49B_chrX_71758349_71772204	CXorf49B	chrX	71758349	71772204
HG01346	hp2	a0001	c0001	t0001	g0001	AMR	CLM	CXorf49B_chrX_71758349_71772204	CXorf49B	chrX	71758349	71772204
HG01515	hp1	a0001	c0001	t0001	g0001	EUR	IBS	CXorf49B_chrX_71758349_71772204	CXorf49B	chrX	71758349	71772204
HG01516	hp1	a0001	c0001	t0001	g0001	EUR	IBS	CXorf49B_chrX_71758349_71772204	CXorf49B	chrX	71758349	71772204
HG01516	hp2	a0001	c0001	t0001	g0001	EUR	IBS	CXorf49B_chrX_71758349_71772204	CXorf49B	chrX	71758349	71772204
HG01928	hp1	a0001	c0001	t0001	g0001	AMR	PEL	CXorf49B_chrX_71758349_71772204	CXorf49B	chrX	71758349	71772204
HG01934	hp1	a0002	c0002	t0001	g0001	AMR	PEL	CXorf49B_chrX_71758349_71772204	CXorf49B	chrX	71758349	71772204
HG02004	hp1	a0001	c0001	t0001	g0001	AMR	PEL	CXorf49B_chrX_71758349_71772204	CXorf49B	chrX	71758349	71772204
HG02004	hp2	a0001	c0001	t0001	g0001	AMR	PEL	CXorf49B_chrX_71758349_71772204	CXorf49B	chrX	71758349	71772204
HG02040	hp1	a0001	c0001	t0001	g0001	EAS	KHV	CXorf49B_chrX_71758349_71772204	CXorf49B	chrX	71758349	71772204
HG02071	hp1	a0001	c0001	t0001	g0001	EAS	KHV	CXorf49B_chrX_71758349_71772204	CXorf49B	chrX	71758349	71772204
HG02074	hp1	a0002	c0002	t0001	g0001	EAS	KHV	CXorf49B_chrX_71758349_71772204	CXorf49B	chrX	71758349	71772204
HG02135	hp1	a0001	c0001	t0001	g0001	EAS	KHV	CXorf49B_chrX_71758349_71772204	CXorf49B	chrX	71758349	71772204
HG02165	hp1	a0003	c0003	t0001	g0001	EAS	CDX	CXorf49B_chrX_71758349_71772204	CXorf49B	chrX	71758349	71772204
HG02165	hp2	a0001	c0001	t0001	g0008	EAS	CDX	CXorf49B_chrX_71758349_71772204	CXorf49B	chrX	71758349	71772204
HG02280	hp1	a0007	c0006	t0001	g0001	AFR	ACB	CXorf49B_chrX_71758349_71772204	CXorf49B	chrX	71758349	71772204
HG02280	hp2	a0002	c0002	t0001	g0001	AFR	ACB	CXorf49B_chrX_71758349_71772204	CXorf49B	chrX	71758349	71772204
HG02293	hp1	a0001	c0001	t0001	g0001	AMR	PEL	CXorf49B_chrX_71758349_71772204	CXorf49B	chrX	71758349	71772204
HG02293	hp2	a0001	c0001	t0001	g0001	AMR	PEL	CXorf49B_chrX_71758349_71772204	CXorf49B	chrX	71758349	71772204
HG02683	hp1	a0001	c0001	t0001	g0001	SAS	PJL	CXorf49B_chrX_71758349_71772204	CXorf49B	chrX	71758349	71772204
HG02683	hp2	a0003	c0003	t0001	g0001	SAS	PJL	CXorf49B_chrX_71758349_71772204	CXorf49B	chrX	71758349	71772204
HG02723	hp1	a0003	c0003	t0001	g0001	AFR	GWD	CXorf49B_chrX_71758349_71772204	CXorf49B	chrX	71758349	71772204
HG02723	hp2	a0001	c0004	t0001	g0005	AFR	GWD	CXorf49B_chrX_71758349_71772204	CXorf49B	chrX	71758349	71772204
HG02735	hp1	a0001	c0001	t0001	g0001	SAS	PJL	CXorf49B_chrX_71758349_71772204	CXorf49B	chrX	71758349	71772204
HG02809	hp1	a0002	c0002	t0001	g0001	AFR	GWD	CXorf49B_chrX_71758349_71772204	CXorf49B	chrX	71758349	71772204
HG02809	hp2	a0002	c0002	t0001	g0002	AFR	GWD	CXorf49B_chrX_71758349_71772204	CXorf49B	chrX	71758349	71772204
HG02895	hp1	a0001	c0001	t0001	g0001	AFR	GWD	CXorf49B_chrX_71758349_71772204	CXorf49B	chrX	71758349	71772204
HG02970	hp1	a0002	c0002	t0001	g0001	AFR	ESN	CXorf49B_chrX_71758349_71772204	CXorf49B	chrX	71758349	71772204
HG02970	hp2	a0002	c0002	t0001	g0001	AFR	ESN	CXorf49B_chrX_71758349_71772204	CXorf49B	chrX	71758349	71772204
HG03225	hp1	a0008	c0008	t0001	g0006	AFR	MSL	CXorf49B_chrX_71758349_71772204	CXorf49B	chrX	71758349	71772204
HG03453	hp1	a0002	c0002	t0001	g0002	AFR	MSL	CXorf49B_chrX_71758349_71772204	CXorf49B	chrX	71758349	71772204
HG03453	hp2	a0002	c0002	t0001	g0001	AFR	MSL	CXorf49B_chrX_71758349_71772204	CXorf49B	chrX	71758349	71772204
HG03486	hp1	a0001	c0004	t0001	g0001	AFR	MSL	CXorf49B_chrX_71758349_71772204	CXorf49B	chrX	71758349	71772204
HG03486	hp2	a0002	c0002	t0001	g0001	AFR	MSL	CXorf49B_chrX_71758349_71772204	CXorf49B	chrX	71758349	71772204
HG03516	hp1	a0001	c0001	t0001	g0001	AFR	ESN	CXorf49B_chrX_71758349_71772204	CXorf49B	chrX	71758349	71772204
HG03516	hp2	a0003	c0003	t0001	g0001	AFR	ESN	CXorf49B_chrX_71758349_71772204	CXorf49B	chrX	71758349	71772204
HG03540	hp1	a0003	c0003	t0001	g0001	AFR	GWD	CXorf49B_chrX_71758349_71772204	CXorf49B	chrX	71758349	71772204
HG03540	hp2	a0001	c0001	t0001	g0001	AFR	GWD	CXorf49B_chrX_71758349_71772204	CXorf49B	chrX	71758349	71772204
HG03654	hp1	a0001	c0001	t0001	g0001	SAS	PJL	CXorf49B_chrX_71758349_71772204	CXorf49B	chrX	71758349	71772204
HG03704	hp1	a0001	c0001	t0001	g0001	SAS	PJL	CXorf49B_chrX_71758349_71772204	CXorf49B	chrX	71758349	71772204
HG03704	hp2	a0001	c0001	t0001	g0001	SAS	PJL	CXorf49B_chrX_71758349_71772204	CXorf49B	chrX	71758349	71772204
HG03831	hp1	a0003	c0003	t0001	g0001	SAS	BEB	CXorf49B_chrX_71758349_71772204	CXorf49B	chrX	71758349	71772204
HG03831	hp2	a0001	c0001	t0001	g0001	SAS	BEB	CXorf49B_chrX_71758349_71772204	CXorf49B	chrX	71758349	71772204
HG03927	hp1	a0001	c0001	t0001	g0001	SAS	BEB	CXorf49B_chrX_71758349_71772204	CXorf49B	chrX	71758349	71772204
HG03927	hp2	a0001	c0001	t0001	g0001	SAS	BEB	CXorf49B_chrX_71758349_71772204	CXorf49B	chrX	71758349	71772204
HG03942	hp1	a0002	c0002	t0001	g0001	SAS	BEB	CXorf49B_chrX_71758349_71772204	CXorf49B	chrX	71758349	71772204
HG04204	hp1	a0002	c0002	t0001	g0001	SAS	STU	CXorf49B_chrX_71758349_71772204	CXorf49B	chrX	71758349	71772204
NA18747	hp1	a0001	c0001	t0001	g0001	EAS	CHB	CXorf49B_chrX_71758349_71772204	CXorf49B	chrX	71758349	71772204
NA18945	hp1	a0002	c0002	t0001	g0001	EAS	JPT	CXorf49B_chrX_71758349_71772204	CXorf49B	chrX	71758349	71772204
NA18946	hp1	a0005	c0009	t0001	g0003	EAS	JPT	CXorf49B_chrX_71758349_71772204	CXorf49B	chrX	71758349	71772204
NA18946	hp2	a0004	c0005	t0001	g0003	EAS	JPT	CXorf49B_chrX_71758349_71772204	CXorf49B	chrX	71758349	71772204
NA18952	hp1	a0004	c0005	t0001	g0003	EAS	JPT	CXorf49B_chrX_71758349_71772204	CXorf49B	chrX	71758349	71772204
NA18967	hp1	a0001	c0001	t0001	g0001	EAS	JPT	CXorf49B_chrX_71758349_71772204	CXorf49B	chrX	71758349	71772204
NA18970	hp1	a0003	c0003	t0001	g0001	EAS	JPT	CXorf49B_chrX_71758349_71772204	CXorf49B	chrX	71758349	71772204
NA18983	hp1	a0002	c0002	t0001	g0001	EAS	JPT	CXorf49B_chrX_71758349_71772204	CXorf49B	chrX	71758349	71772204
NA18984	hp1	a0001	c0001	t0001	g0001	EAS	JPT	CXorf49B_chrX_71758349_71772204	CXorf49B	chrX	71758349	71772204
NA18995	hp1	a0001	c0001	t0001	g0001	EAS	JPT	CXorf49B_chrX_71758349_71772204	CXorf49B	chrX	71758349	71772204
NA19006	hp1	a0009	c0007	t0001	g0007	EAS	JPT	CXorf49B_chrX_71758349_71772204	CXorf49B	chrX	71758349	71772204
NA19012	hp1	a0001	c0001	t0001	g0001	EAS	JPT	CXorf49B_chrX_71758349_71772204	CXorf49B	chrX	71758349	71772204
NA19058	hp1	a0001	c0001	t0001	g0001	EAS	JPT	CXorf49B_chrX_71758349_71772204	CXorf49B	chrX	71758349	71772204
NA19063	hp1	a0002	c0002	t0001	g0001	EAS	JPT	CXorf49B_chrX_71758349_71772204	CXorf49B	chrX	71758349	71772204
NA19064	hp1	a0002	c0002	t0001	g0001	EAS	JPT	CXorf49B_chrX_71758349_71772204	CXorf49B	chrX	71758349	71772204
NA19064	hp2	a0001	c0001	t0001	g0001	EAS	JPT	CXorf49B_chrX_71758349_71772204	CXorf49B	chrX	71758349	71772204
NA19067	hp1	a0002	c0002	t0001	g0001	EAS	JPT	CXorf49B_chrX_71758349_71772204	CXorf49B	chrX	71758349	71772204
NA19072	hp1	a0003	c0003	t0001	g0001	EAS	JPT	CXorf49B_chrX_71758349_71772204	CXorf49B	chrX	71758349	71772204
NA19085	hp1	a0001	c0001	t0001	g0001	EAS	JPT	CXorf49B_chrX_71758349_71772204	CXorf49B	chrX	71758349	71772204
NA19088	hp2	a0002	c0002	t0001	g0001	EAS	JPT	CXorf49B_chrX_71758349_71772204	CXorf49B	chrX	71758349	71772204
NA19089	hp1	a0006	c0010	t0001	g0001	EAS	JPT	CXorf49B_chrX_71758349_71772204	CXorf49B	chrX	71758349	71772204
NA20129	hp1	a0001	c0001	t0001	g0001	AFR	ASW	CXorf49B_chrX_71758349_71772204	CXorf49B	chrX	71758349	71772204
NA20129	hp2	a0001	c0001	t0001	g0001	AFR	ASW	CXorf49B_chrX_71758349_71772204	CXorf49B	chrX	71758349	71772204
NA20805	hp1	a0001	c0001	t0001	g0001	EUR	TSI	CXorf49B_chrX_71758349_71772204	CXorf49B	chrX	71758349	71772204
HG01123	hp1	a0001	c0001	t0001	g0001	AMR	CLM	CXorf49B_chrX_71758349_71772204	CXorf49B	chrX	71758349	71772204
HG01123	hp2	a0001	c0001	t0001	g0001	AMR	CLM	CXorf49B_chrX_71758349_71772204	CXorf49B	chrX	71758349	71772204
HG02559	hp1	a0001	c0004	t0001	g0005	AFR	ACB	CXorf49B_chrX_71758349_71772204	CXorf49B	chrX	71758349	71772204
HG02559	hp2	a0001	c0001	t0001	g0001	AFR	ACB	CXorf49B_chrX_71758349_71772204	CXorf49B	chrX	71758349	71772204
HG06807	hp1	a0003	c0003	t0001	g0001	AFR	USA	CXorf49B_chrX_71758349_71772204	CXorf49B	chrX	71758349	71772204
HG06807	hp2	a0001	c0001	t0001	g0010	AFR	USA	CXorf49B_chrX_71758349_71772204	CXorf49B	chrX	71758349	71772204
NA18955	hp1	a0001	c0001	t0001	g0001	EAS	JPT	CXorf49B_chrX_71758349_71772204	CXorf49B	chrX	71758349	71772204
NA21309	hp1	a0001	c0001	t0001	g0001	AFR	LWK	CXorf49B_chrX_71758349_71772204	CXorf49B	chrX	71758349	71772204
NA21309	hp2	a0001	c0001	t0001	g0001	AFR	LWK	CXorf49B_chrX_71758349_71772204	CXorf49B	chrX	71758349	71772204

chr:pos	ref	alt	# # of ahapid:amino-acid(protein) level	ahapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	hgvs_p	genename	geneid	featuretype	featureid	transcript_biotype	rank	cdna cdna pos length	cds cds pos length	aa aa pos length	status	chr	pos
chrX:71763431	C C	T T	3	a0004 a0005 a0006 a0004 a0005 a0006	4	NA18946.hp1 NA18946.hp2 NA18952.hp1 others(1): Show NA18946.hp1 NA18946.hp2 NA18952.hp1 NA19089.hp1	missense_variant	MODERATE	c.8C>T c.8C>T	p.Ser3Phe p.Ser3Phe	CXorf49B	ENSG00000215113.7	transcript	ENST00000542739.3	protein_coding	1/6	83/1795	8/1545	3/514		chrX	71763431
chrX:71763453	T T	G G	1	a0002 a0002	19	HG00741.hp1 HG01934.hp1 HG02074.hp1 others(16): Show HG00741.hp1 HG01934.hp1 HG02074.hp1 HG02280.hp2 HG02809.hp1 HG02809.hp2 HG02970.hp1 HG02970.hp2 HG03453.hp1 HG03453.hp2 HG03486.hp2 HG03942.hp1 HG04204.hp1 NA18945.hp1 NA18983.hp1 NA19063.hp1 NA19064.hp1 NA19067.hp1 NA19088.hp2	missense_variant	MODERATE	c.30T>G c.30T>G	p.Cys10Trp p.Cys10Trp	CXorf49B	ENSG00000215113.7	transcript	ENST00000542739.3	protein_coding	1/6	105/1795	30/1545	10/514		chrX	71763453
chrX:71763575	G G	A A	1	a0007 a0007	1	HG02280.hp1 HG02280.hp1	missense_variant	MODERATE	c.152G>A c.152G>A	p.Ser51Asn p.Ser51Asn	CXorf49B	ENSG00000215113.7	transcript	ENST00000542739.3	protein_coding	1/6	227/1795	152/1545	51/514		chrX	71763575
chrX:71763582	C C	CG CG	1	a0009 a0009	1	NA19006.hp1 NA19006.hp1	frameshift_variant	HIGH	c.162dupG c.162dupG	p.Phe55fs p.Phe55fs	CXorf49B	ENSG00000215113.7	transcript	ENST00000542739.3	protein_coding	1/6	238/1795	163/1545	55/514	INFO_REALIGN_3_PRIME	chrX	71763582
chrX:71763851	A A	G G	1	a0003 a0003	10	HG01346.hp1 HG02165.hp1 HG02683.hp2 others(7): Show HG01346.hp1 HG02165.hp1 HG02683.hp2 HG02723.hp1 HG03516.hp2 HG03540.hp1 HG03831.hp1 HG06807.hp1 NA18970.hp1 NA19072.hp1	missense_variant	MODERATE	c.428A>G c.428A>G	p.Asp143Gly p.Asp143Gly	CXorf49B	ENSG00000215113.7	transcript	ENST00000542739.3	protein_coding	1/6	503/1795	428/1545	143/514		chrX	71763851
chrX:71763899	G G	C C	2	a0004 a0005 a0004 a0005	3	NA18946.hp1 NA18946.hp2 NA18952.hp1 NA18946.hp1 NA18946.hp2 NA18952.hp1	missense_variant	MODERATE	c.476G>C c.476G>C	p.Arg159Pro p.Arg159Pro	CXorf49B	ENSG00000215113.7	transcript	ENST00000542739.3	protein_coding	1/6	551/1795	476/1545	159/514		chrX	71763899
chrX:71764268	C C	T T	1	a0003 a0003	10	HG01346.hp1 HG02165.hp1 HG02683.hp2 others(7): Show HG01346.hp1 HG02165.hp1 HG02683.hp2 HG02723.hp1 HG03516.hp2 HG03540.hp1 HG03831.hp1 HG06807.hp1 NA18970.hp1 NA19072.hp1	missense_variant	MODERATE	c.845C>T c.845C>T	p.Pro282Leu p.Pro282Leu	CXorf49B	ENSG00000215113.7	transcript	ENST00000542739.3	protein_coding	1/6	920/1795	845/1545	282/514		chrX	71764268
chrX:71764421	T T	C C	3	a0002 a0003 a0008 a0002 a0003 a0008	30	HG00741.hp1 HG01346.hp1 HG01934.hp1 others(27): Show HG00741.hp1 HG01346.hp1 HG01934.hp1 HG02074.hp1 HG02165.hp1 HG02280.hp2 HG02683.hp2 HG02723.hp1 HG02809.hp1 HG02809.hp2 HG02970.hp1 HG02970.hp2 HG03225.hp1 HG03453.hp1 HG03453.hp2 HG03486.hp2 HG03516.hp2 HG03540.hp1 HG03831.hp1 HG03942.hp1 HG04204.hp1 HG06807.hp1 NA18945.hp1 NA18970.hp1 NA18983.hp1 NA19063.hp1 NA19064.hp1 NA19067.hp1 NA19072.hp1 NA19088.hp2	missense_variant	MODERATE	c.998T>C c.998T>C	p.Leu333Pro p.Leu333Pro	CXorf49B	ENSG00000215113.7	transcript	ENST00000542739.3	protein_coding	1/6	1073/1795	998/1545	333/514		chrX	71764421
chrX:71765946	TC TC	T T	1	a0005 a0005	1	NA18946.hp1 NA18946.hp1	frameshift_variant	HIGH	c.1409delC c.1409delC	p.Pro470fs p.Pro470fs	CXorf49B	ENSG00000215113.7	transcript	ENST00000542739.3	protein_coding	3/6	1484/1795	1409/1545	470/514	INFO_REALIGN_3_PRIME	chrX	71765946

chr:pos	ref	alt	# # of chapid	chapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	hgvs_p	genename	geneid	featuretype	featureid	transcript_biotype	rank	cdna cdna pos length	cds cds pos length	aa aa pos length	distance	status	chr	pos
chrX:71763792	C C	T T	1	a0007c0006 a0007c0006	1	HG02280.hp1 HG02280.hp1	synonymous_variant	LOW	c.369C>T c.369C>T	p.Ala123Ala p.Ala123Ala	CXorf49B	ENSG00000215113.7	transcript	ENST00000542739.3	protein_coding	1/6	444/1795	369/1545	123/514			chrX	71763792
chrX:71764335	T T	C C	9	a0001c0001 a0002c0002 a0003c0003 others(6): Show a0001c0001 a0002c0002 a0003c0003 a0004c0005 a0005c0009 a0006c0010 a0007c0006 a0008c0008 a0009c0007	92	HG00099.hp1 HG00099.hp2 HG00280.hp1 others(89): Show HG00099.hp1 HG00099.hp2 HG00280.hp1 HG00621.hp1 HG00642.hp1 HG00738.hp1 HG00741.hp1 HG00741.hp2 HG01071.hp1 HG01071.hp2 HG01081.hp1 HG01081.hp2 HG01106.hp1 HG01123.hp1 HG01123.hp2 HG01168.hp1 HG01168.hp2 HG01346.hp1 HG01346.hp2 HG01515.hp1 HG01516.hp1 HG01516.hp2 HG01928.hp1 HG01934.hp1 HG02004.hp1 HG02004.hp2 HG02040.hp1 HG02071.hp1 HG02074.hp1 HG02135.hp1 HG02165.hp1 HG02165.hp2 HG02280.hp1 HG02280.hp2 HG02293.hp1 HG02293.hp2 HG02559.hp2 HG02683.hp1 HG02683.hp2 HG02723.hp1 HG02735.hp1 HG02809.hp1 HG02809.hp2 HG02895.hp1 HG02970.hp1 HG02970.hp2 HG03225.hp1 HG03453.hp1 HG03453.hp2 HG03486.hp2 HG03516.hp1 HG03516.hp2 HG03540.hp1 HG03540.hp2 HG03654.hp1 HG03704.hp1 HG03704.hp2 HG03831.hp1 HG03831.hp2 HG03927.hp1 HG03927.hp2 HG03942.hp1 HG04204.hp1 HG06807.hp1 HG06807.hp2 NA18747.hp1 NA18945.hp1 NA18946.hp1 NA18946.hp2 NA18952.hp1 NA18955.hp1 NA18967.hp1 NA18970.hp1 NA18983.hp1 NA18984.hp1 NA18995.hp1 NA19006.hp1 NA19012.hp1 NA19058.hp1 NA19063.hp1 NA19064.hp1 NA19064.hp2 NA19067.hp1 NA19072.hp1 NA19085.hp1 NA19088.hp2 NA19089.hp1 NA20129.hp1 NA20129.hp2 NA20805.hp1 NA21309.hp1 NA21309.hp2	synonymous_variant	LOW	c.912T>C c.912T>C	p.Ala304Ala p.Ala304Ala	CXorf49B	ENSG00000215113.7	transcript	ENST00000542739.3	protein_coding	1/6	987/1795	912/1545	304/514			chrX	71764335

chr:pos	ref	alt	# # of thapid:transcript level	thapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	hgvs_p	genename	geneid	featuretype	featureid	transcript_biotype	rank	cdna cdna pos length	cds cds pos length	aa aa pos length	distance	status	chr	pos

chr:pos	ref	alt	# # of ghapid:genebody level	ghapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	genename	geneid	featuretype	featureid	genebody_biotype	rank	status	chr	pos
chrX:71764796	G G	A A	1	a0008c0008t0001g0006 a0008c0008t0001g0006	1	HG03225.hp1 HG03225.hp1	intron_variant	MODIFIER	c.1224+149G>A c.1224+149G>A	CXorf49B	ENSG00000215113.7	transcript	ENST00000542739.3	protein_coding	1/5		chrX	71764796
chrX:71764885	G G	GC GC	1	a0009c0007t0001g0007 a0009c0007t0001g0007	1	NA19006.hp1 NA19006.hp1	intron_variant	MODIFIER	c.1224+241dupC c.1224+241dupC	CXorf49B	ENSG00000215113.7	transcript	ENST00000542739.3	protein_coding	1/5	INFO_REALIGN_3_PRIME	chrX	71764885
chrX:71765167	C C	G G	1	a0008c0008t0001g0006 a0008c0008t0001g0006	1	HG03225.hp1 HG03225.hp1	intron_variant	MODIFIER	c.1225-57C>G c.1225-57C>G	CXorf49B	ENSG00000215113.7	transcript	ENST00000542739.3	protein_coding	1/5		chrX	71765167
chrX:71765472	C C	T T	2	a0004c0005t0001g0003 a0005c0009t0001g0003 a0004c0005t0001g0003 a0005c0009t0001g0003	3	NA18946.hp1 NA18946.hp2 NA18952.hp1 NA18946.hp1 NA18946.hp2 NA18952.hp1	intron_variant	MODIFIER	c.1381+92C>T c.1381+92C>T	CXorf49B	ENSG00000215113.7	transcript	ENST00000542739.3	protein_coding	2/5		chrX	71765472
chrX:71765505	C C	CG CG	1	a0009c0007t0001g0007 a0009c0007t0001g0007	1	NA19006.hp1 NA19006.hp1	intron_variant	MODIFIER	c.1381+129dupG c.1381+129dupG	CXorf49B	ENSG00000215113.7	transcript	ENST00000542739.3	protein_coding	2/5	INFO_REALIGN_3_PRIME	chrX	71765505
chrX:71765580	C C	T T	1	a0001c0001t0001g0010 a0001c0001t0001g0010	1	HG06807.hp2 HG06807.hp2	intron_variant	MODIFIER	c.1381+200C>T c.1381+200C>T	CXorf49B	ENSG00000215113.7	transcript	ENST00000542739.3	protein_coding	2/5		chrX	71765580
chrX:71765780	C C	CA CA	1	a0009c0007t0001g0007 a0009c0007t0001g0007	1	NA19006.hp1 NA19006.hp1	intron_variant	MODIFIER	c.1382-143dupA c.1382-143dupA	CXorf49B	ENSG00000215113.7	transcript	ENST00000542739.3	protein_coding	2/5	INFO_REALIGN_3_PRIME	chrX	71765780
chrX:71766014	T T	TG TG	1	a0009c0007t0001g0007 a0009c0007t0001g0007	1	NA19006.hp1 NA19006.hp1	intron_variant	MODIFIER	c.1458+16dupG c.1458+16dupG	CXorf49B	ENSG00000215113.7	transcript	ENST00000542739.3	protein_coding	3/5	INFO_REALIGN_3_PRIME	chrX	71766014
chrX:71766063	G G	GT GT	1	a0001c0001t0001g0009 a0001c0001t0001g0009	1	HG00741.hp2 HG00741.hp2	intron_variant	MODIFIER	c.1458+65dupT c.1458+65dupT	CXorf49B	ENSG00000215113.7	transcript	ENST00000542739.3	protein_coding	3/5	INFO_REALIGN_3_PRIME	chrX	71766063
chrX:71766385	T T	TG TG	1	a0009c0007t0001g0007 a0009c0007t0001g0007	1	NA19006.hp1 NA19006.hp1	intron_variant	MODIFIER	c.1504+62dupG c.1504+62dupG	CXorf49B	ENSG00000215113.7	transcript	ENST00000542739.3	protein_coding	4/5	INFO_REALIGN_3_PRIME	chrX	71766385
chrX:71766489	C C	G G	1	a0001c0001t0001g0008 a0001c0001t0001g0008	1	HG02165.hp2 HG02165.hp2	intron_variant	MODIFIER	c.1504+161C>G c.1504+161C>G	CXorf49B	ENSG00000215113.7	transcript	ENST00000542739.3	protein_coding	4/5		chrX	71766489
chrX:71766623	T T	C C	15	a0001c0001t0001g0001 a0001c0001t0001g0004 a0001c0001t0001g0008 others(12): Show a0001c0001t0001g0001 a0001c0001t0001g0004 a0001c0001t0001g0008 a0001c0001t0001g0009 a0001c0001t0001g0010 a0001c0004t0001g0001 a0002c0002t0001g0001 a0002c0002t0001g0002 a0003c0003t0001g0001 a0004c0005t0001g0003 a0005c0009t0001g0003 a0006c0010t0001g0001 a0007c0006t0001g0001 a0008c0008t0001g0006 a0009c0007t0001g0007	93	HG00099.hp1 HG00099.hp2 HG00280.hp1 others(90): Show HG00099.hp1 HG00099.hp2 HG00280.hp1 HG00621.hp1 HG00642.hp1 HG00738.hp1 HG00741.hp1 HG00741.hp2 HG01071.hp1 HG01071.hp2 HG01081.hp1 HG01081.hp2 HG01106.hp1 HG01123.hp1 HG01123.hp2 HG01168.hp1 HG01168.hp2 HG01346.hp1 HG01346.hp2 HG01515.hp1 HG01516.hp1 HG01516.hp2 HG01928.hp1 HG01934.hp1 HG02004.hp1 HG02004.hp2 HG02040.hp1 HG02071.hp1 HG02074.hp1 HG02135.hp1 HG02165.hp1 HG02165.hp2 HG02280.hp1 HG02280.hp2 HG02293.hp1 HG02293.hp2 HG02559.hp2 HG02683.hp1 HG02683.hp2 HG02723.hp1 HG02735.hp1 HG02809.hp1 HG02809.hp2 HG02895.hp1 HG02970.hp1 HG02970.hp2 HG03225.hp1 HG03453.hp1 HG03453.hp2 HG03486.hp1 HG03486.hp2 HG03516.hp1 HG03516.hp2 HG03540.hp1 HG03540.hp2 HG03654.hp1 HG03704.hp1 HG03704.hp2 HG03831.hp1 HG03831.hp2 HG03927.hp1 HG03927.hp2 HG03942.hp1 HG04204.hp1 HG06807.hp1 HG06807.hp2 NA18747.hp1 NA18945.hp1 NA18946.hp1 NA18946.hp2 NA18952.hp1 NA18955.hp1 NA18967.hp1 NA18970.hp1 NA18983.hp1 NA18984.hp1 NA18995.hp1 NA19006.hp1 NA19012.hp1 NA19058.hp1 NA19063.hp1 NA19064.hp1 NA19064.hp2 NA19067.hp1 NA19072.hp1 NA19085.hp1 NA19088.hp2 NA19089.hp1 NA20129.hp1 NA20129.hp2 NA20805.hp1 NA21309.hp1 NA21309.hp2	intron_variant	MODIFIER	c.1505-260T>C c.1505-260T>C	CXorf49B	ENSG00000215113.7	transcript	ENST00000542739.3	protein_coding	4/5		chrX	71766623
chrX:71766694	G G	GC GC	1	a0009c0007t0001g0007 a0009c0007t0001g0007	1	NA19006.hp1 NA19006.hp1	intron_variant	MODIFIER	c.1505-186dupC c.1505-186dupC	CXorf49B	ENSG00000215113.7	transcript	ENST00000542739.3	protein_coding	4/5	INFO_REALIGN_3_PRIME	chrX	71766694
chrX:71766762	T T	C C	1	a0001c0001t0001g0004 a0001c0001t0001g0004	2	HG00099.hp1 HG01106.hp1 HG00099.hp1 HG01106.hp1	intron_variant	MODIFIER	c.1505-121T>C c.1505-121T>C	CXorf49B	ENSG00000215113.7	transcript	ENST00000542739.3	protein_coding	4/5		chrX	71766762
chrX:71766818	C C	CG CG	1	a0009c0007t0001g0007 a0009c0007t0001g0007	1	NA19006.hp1 NA19006.hp1	intron_variant	MODIFIER	c.1505-61dupG c.1505-61dupG	CXorf49B	ENSG00000215113.7	transcript	ENST00000542739.3	protein_coding	4/5	INFO_REALIGN_3_PRIME	chrX	71766818
chrX:71766819	G G	A A	1	a0002c0002t0001g0002 a0002c0002t0001g0002	3	HG00741.hp1 HG02809.hp2 HG03453.hp1 HG00741.hp1 HG02809.hp2 HG03453.hp1	intron_variant	MODIFIER	c.1505-64G>A c.1505-64G>A	CXorf49B	ENSG00000215113.7	transcript	ENST00000542739.3	protein_coding	4/5		chrX	71766819
chrX:71766945	G G	GC GC	1	a0009c0007t0001g0007 a0009c0007t0001g0007	1	NA19006.hp1 NA19006.hp1	intron_variant	MODIFIER	c.1+25dupC c.1+25dupC	CXorf49B	ENSG00000215113.7	transcript	ENST00000542739.3	protein_coding	5/5	INFO_REALIGN_3_PRIME	chrX	71766945

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Translation Multiple Alignment View

🧬 Gene Summary (with MANE)

AAmino acid(protein) Level Haplotype Info (Total: 9)

CCoding Level Haplotype Info (Total: 10)

TTranscript Level Haplotype Info (Total: 1)

GGenebody Level Haplotype Info (Total: 10)

A C AC Level (Amino Acid + Coding) Haplotype Info (Total: 10)

A C T ACT Level (Amino Acid + Coding + Transcript) Haplotype Info (Total: 10)

A C T G ACTG Level (Amino Acid + Coding + Transcript + Genebody) Haplotype Info (Total: 16)

Haplotype Details by Sample (Haploid Level) (Total: 95)

AAmino acid(protein) Level Haplotype Related Variants (Effect to Protein Coding Variants) (Total: 9)

CCoding Level Variants (On coding region but no effect to protein coding variants: Synonymous Mutations) (Total: 2)

TTranscript Level Haplotype Variants (Exon) (Total: 0)

GGenebody Level Haplotype Variants (Intron) (Total: 17)

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Annotation (Repeats)

Annotation (SNP Array)