JoGo: Joint Open Genome and Omics Platform

Search by Genic region

geneid	29934
ensemblid	ENSG00000147164.12
hgncid	14976
symbol	SNX12
name	sorting nexin 12
refseq_nuc	NM_013346.4
refseq_prot	NP_037478.2
ensembl_nuc	ENST00000374274.8
ensembl_prot	ENSP00000363392.3
mane_status	MANE Select
chr	chrX
start	71059247
end	71068334
strand	-
ver	v1.2
region	chrX:71059247-71068334
region5000	chrX:71054247-71073334
regionname0	SNX12_chrX_71059247_71068334
regionname5000	SNX12_chrX_71054247_71073334

ahapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	alen	total	AFR	AMR	EAS	EUR	SAS	JPT	regionname	genename	aa	chr	start	end
a0001	1/1	162	308	74	62	131	9	30	100	SNX12_chrX_71054247_71073334	SNX12	copy fasta	chrX	71054247	71073334
a0002	0/0	162	1	0	0	1	0	0	1	SNX12_chrX_71054247_71073334	SNX12	copy fasta	chrX	71054247	71073334

chapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	clen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	cseq	chr	start	end
c0001	1/1	489	291	69	60	122	9	29	SNX12_chrX_71054247_71073334	SNX12	copy fasta	chrX	71054247	71073334
c0002	0/0	489	17	5	2	9	0	1	SNX12_chrX_71054247_71073334	SNX12	copy fasta	chrX	71054247	71073334
c0003	0/0	489	1	0	0	1	0	0	SNX12_chrX_71054247_71073334	SNX12	copy fasta	chrX	71054247	71073334

thapid	grch38 chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	tlen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	tseq	chr	start	end
t0001	0/1	1798	152	56	36	42	5	12	SNX12_chrX_71054247_71073334	SNX12	copy fasta	chrX	71054247	71073334
t0002	1/0	1798	122	8	19	77	3	14	SNX12_chrX_71054247_71073334	SNX12	copy fasta	chrX	71054247	71073334
t0003	0/0	1798	16	5	2	8	0	1	SNX12_chrX_71054247_71073334	SNX12	copy fasta	chrX	71054247	71073334
t0004	0/0	1798	5	0	3	0	1	1	SNX12_chrX_71054247_71073334	SNX12	copy fasta	chrX	71054247	71073334
t0005	0/0	1798	3	3	0	0	0	0	SNX12_chrX_71054247_71073334	SNX12	copy fasta	chrX	71054247	71073334
t0006	0/0	1798	2	0	2	0	0	0	SNX12_chrX_71054247_71073334	SNX12	copy fasta	chrX	71054247	71073334
t0007	0/0	1802	1	0	0	1	0	0	SNX12_chrX_71054247_71073334	SNX12	copy fasta	chrX	71054247	71073334
t0008	0/0	1798	1	0	0	0	0	1	SNX12_chrX_71054247_71073334	SNX12	copy fasta	chrX	71054247	71073334
t0009	0/0	1798	1	1	0	0	0	0	SNX12_chrX_71054247_71073334	SNX12	copy fasta	chrX	71054247	71073334
t0010	0/0	1798	1	1	0	0	0	0	SNX12_chrX_71054247_71073334	SNX12	copy fasta	chrX	71054247	71073334
t0011	0/0	1798	1	0	0	1	0	0	SNX12_chrX_71054247_71073334	SNX12	copy fasta	chrX	71054247	71073334
t0012	0/0	1798	1	0	0	1	0	0	SNX12_chrX_71054247_71073334	SNX12	copy fasta	chrX	71054247	71073334
t0013	0/0	1799	1	0	0	1	0	0	SNX12_chrX_71054247_71073334	SNX12	copy fasta	chrX	71054247	71073334
t0014	0/0	1798	1	0	0	0	0	1	SNX12_chrX_71054247_71073334	SNX12	copy fasta	chrX	71054247	71073334
t0015	0/0	1799	1	0	0	1	0	0	SNX12_chrX_71054247_71073334	SNX12	copy fasta	chrX	71054247	71073334

ghapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	chr	start	end
g0001	1/0	72	2	8	48	3	10	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
g0002	0/0	30	0	15	14	0	1	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
g0003	0/1	23	15	2	0	2	3	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
g0004	0/0	10	1	4	5	0	0	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
g0005	0/0	10	0	0	9	0	1	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
g0006	0/0	8	8	0	0	0	0	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
g0007	0/0	7	0	5	0	2	0	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
g0008	0/0	7	3	1	2	0	1	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
g0009	0/0	7	0	1	6	0	0	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
g0010	0/0	6	0	0	6	0	0	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
g0011	0/0	5	5	0	0	0	0	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
g0012	0/0	4	0	2	0	1	1	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
g0013	0/0	4	0	3	1	0	0	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
g0014	0/0	4	0	1	3	0	0	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
g0015	0/0	3	0	2	1	0	0	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
g0016	0/0	3	3	0	0	0	0	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
g0017	0/0	3	2	1	0	0	0	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
g0018	0/0	3	0	0	3	0	0	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
g0019	0/0	3	2	0	0	1	0	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
g0020	0/0	3	3	0	0	0	0	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
g0021	0/0	2	0	1	1	0	0	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
g0022	0/0	2	2	0	0	0	0	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
g0023	0/0	2	2	0	0	0	0	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
g0024	0/0	2	1	0	1	0	0	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
g0025	0/0	2	1	1	0	0	0	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
g0026	0/0	2	0	0	1	0	1	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
g0027	0/0	2	0	0	2	0	0	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
g0028	0/0	2	0	0	2	0	0	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
g0029	0/0	2	0	0	2	0	0	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
g0030	0/0	1	0	0	0	0	1	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
g0031	0/0	1	0	0	1	0	0	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
g0032	0/0	1	0	0	1	0	0	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
g0033	0/0	1	1	0	0	0	0	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
g0034	0/0	1	1	0	0	0	0	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
g0035	0/0	1	1	0	0	0	0	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
g0036	0/0	1	0	1	0	0	0	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
g0037	0/0	1	0	1	0	0	0	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
g0038	0/0	1	0	1	0	0	0	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
g0039	0/0	1	0	0	0	0	1	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
g0040	0/0	1	1	0	0	0	0	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
g0041	0/0	1	0	1	0	0	0	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
g0042	0/0	1	0	0	1	0	0	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
g0043	0/0	1	0	1	0	0	0	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
g0044	0/0	1	0	0	1	0	0	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
g0045	0/0	1	1	0	0	0	0	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
g0046	0/0	1	1	0	0	0	0	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
g0047	0/0	1	1	0	0	0	0	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
g0048	0/0	1	0	0	0	0	1	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
g0049	0/0	1	0	0	1	0	0	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
g0050	0/0	1	1	0	0	0	0	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
g0051	0/0	1	0	0	1	0	0	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
g0052	0/0	1	0	0	1	0	0	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
g0053	0/0	1	1	0	0	0	0	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
g0054	0/0	1	0	0	1	0	0	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
g0055	0/0	1	0	1	0	0	0	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
g0056	0/0	1	1	0	0	0	0	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
g0057	0/0	1	1	0	0	0	0	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
g0058	0/0	1	1	0	0	0	0	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
g0059	0/0	1	1	0	0	0	0	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
g0060	0/0	1	1	0	0	0	0	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
g0061	0/0	1	1	0	0	0	0	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
g0062	0/0	1	0	1	0	0	0	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
g0063	0/0	1	0	0	1	0	0	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
g0064	0/0	1	0	1	0	0	0	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
g0065	0/0	1	0	0	1	0	0	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
g0066	0/0	1	0	0	1	0	0	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
g0067	0/0	1	0	0	1	0	0	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
g0068	0/0	1	0	0	0	0	1	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
g0069	0/0	1	0	0	0	0	1	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
g0070	0/0	1	0	0	1	0	0	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
g0071	0/0	1	0	1	0	0	0	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
g0072	0/0	1	0	0	1	0	0	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
g0073	0/0	1	0	0	1	0	0	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
g0074	0/0	1	1	0	0	0	0	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
g0075	0/0	1	0	1	0	0	0	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
g0076	0/0	1	0	1	0	0	0	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
g0077	0/0	1	0	1	0	0	0	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
g0078	0/0	1	1	0	0	0	0	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
g0079	0/0	1	0	1	0	0	0	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
g0080	0/0	1	0	0	0	0	1	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
g0081	0/0	1	0	0	1	0	0	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
g0082	0/0	1	0	0	0	0	1	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
g0083	0/0	1	1	0	0	0	0	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
g0084	0/0	1	0	0	1	0	0	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
g0085	0/0	1	0	0	1	0	0	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
g0086	0/0	1	0	0	1	0	0	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
g0087	0/0	1	0	0	0	0	1	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
g0088	0/0	1	0	0	1	0	0	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
g0089	0/0	1	0	0	1	0	0	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
g0090	0/0	1	0	0	1	0	0	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
g0091	0/0	1	0	0	1	0	0	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
g0092	0/0	1	1	0	0	0	0	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
g0093	0/0	1	0	0	1	0	0	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
g0094	0/0	1	0	0	0	0	1	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
g0095	0/0	1	1	0	0	0	0	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
g0096	0/0	1	0	0	1	0	0	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
g0097	0/0	1	0	1	0	0	0	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
g0098	0/0	1	0	0	0	0	1	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
g0099	0/0	1	0	0	0	0	1	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
g0100	0/0	1	0	1	0	0	0	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
g0101	0/0	1	0	0	0	0	1	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
g0102	0/0	1	1	0	0	0	0	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
g0103	0/0	1	1	0	0	0	0	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
g0104	0/0	1	1	0	0	0	0	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
g0105	0/0	1	1	0	0	0	0	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334

achapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	clen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	cseq	chr	start	end
a0001c0001	1/1	489	291	69	60	122	9	29	SNX12_chrX_71054247_71073334	SNX12	copy fasta	chrX	71054247	71073334
a0001c0002	0/0	489	17	5	2	9	0	1	SNX12_chrX_71054247_71073334	SNX12	copy fasta	chrX	71054247	71073334
a0002c0003	0/0	489	1	0	0	1	0	0	SNX12_chrX_71054247_71073334	SNX12	copy fasta	chrX	71054247	71073334

acthapid	grch38 chm13v2	tlen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	tseq	chr	start	end
a0001c0001t0001	0/1	2286	152	56	36	42	5	12	SNX12_chrX_71054247_71073334	SNX12	copy fasta	chrX	71054247	71073334
a0001c0001t0002	1/0	2286	121	8	19	76	3	14	SNX12_chrX_71054247_71073334	SNX12	copy fasta	chrX	71054247	71073334
a0001c0001t0004	0/0	2286	5	0	3	0	1	1	SNX12_chrX_71054247_71073334	SNX12	copy fasta	chrX	71054247	71073334
a0001c0001t0005	0/0	2286	3	3	0	0	0	0	SNX12_chrX_71054247_71073334	SNX12	copy fasta	chrX	71054247	71073334
a0001c0001t0006	0/0	2286	2	0	2	0	0	0	SNX12_chrX_71054247_71073334	SNX12	copy fasta	chrX	71054247	71073334
a0001c0001t0008	0/0	2286	1	0	0	0	0	1	SNX12_chrX_71054247_71073334	SNX12	copy fasta	chrX	71054247	71073334
a0001c0001t0009	0/0	2286	1	1	0	0	0	0	SNX12_chrX_71054247_71073334	SNX12	copy fasta	chrX	71054247	71073334
a0001c0001t0010	0/0	2286	1	1	0	0	0	0	SNX12_chrX_71054247_71073334	SNX12	copy fasta	chrX	71054247	71073334
a0001c0001t0011	0/0	2286	1	0	0	1	0	0	SNX12_chrX_71054247_71073334	SNX12	copy fasta	chrX	71054247	71073334
a0001c0001t0012	0/0	2286	1	0	0	1	0	0	SNX12_chrX_71054247_71073334	SNX12	copy fasta	chrX	71054247	71073334
a0001c0001t0013	0/0	2287	1	0	0	1	0	0	SNX12_chrX_71054247_71073334	SNX12	copy fasta	chrX	71054247	71073334
a0001c0001t0014	0/0	2286	1	0	0	0	0	1	SNX12_chrX_71054247_71073334	SNX12	copy fasta	chrX	71054247	71073334
a0001c0001t0015	0/0	2287	1	0	0	1	0	0	SNX12_chrX_71054247_71073334	SNX12	copy fasta	chrX	71054247	71073334
a0001c0002t0003	0/0	2286	16	5	2	8	0	1	SNX12_chrX_71054247_71073334	SNX12	copy fasta	chrX	71054247	71073334
a0001c0002t0007	0/0	2290	1	0	0	1	0	0	SNX12_chrX_71054247_71073334	SNX12	copy fasta	chrX	71054247	71073334
a0002c0003t0002	0/0	2286	1	0	0	1	0	0	SNX12_chrX_71054247_71073334	SNX12	copy fasta	chrX	71054247	71073334

actghapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	chr	start	end
a0001c0001t0001g0002	0/0	30	0	15	14	0	1	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
a0001c0001t0001g0003	0/1	23	15	2	0	2	3	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
a0001c0001t0001g0005	0/0	10	0	0	9	0	1	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
a0001c0001t0001g0006	0/0	8	8	0	0	0	0	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
a0001c0001t0001g0007	0/0	7	0	5	0	2	0	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
a0001c0001t0001g0011	0/0	5	5	0	0	0	0	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
a0001c0001t0001g0013	0/0	4	0	3	1	0	0	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
a0001c0001t0001g0014	0/0	4	0	1	3	0	0	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
a0001c0001t0001g0015	0/0	3	0	2	1	0	0	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
a0001c0001t0001g0016	0/0	3	3	0	0	0	0	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
a0001c0001t0001g0019	0/0	3	2	0	0	1	0	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
a0001c0001t0001g0020	0/0	3	3	0	0	0	0	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
a0001c0001t0001g0022	0/0	2	2	0	0	0	0	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
a0001c0001t0001g0024	0/0	2	1	0	1	0	0	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
a0001c0001t0001g0027	0/0	2	0	0	2	0	0	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
a0001c0001t0001g0028	0/0	2	0	0	2	0	0	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
a0001c0001t0001g0029	0/0	2	0	0	2	0	0	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
a0001c0001t0001g0030	0/0	1	0	0	0	0	1	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
a0001c0001t0001g0031	0/0	1	0	0	1	0	0	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
a0001c0001t0001g0033	0/0	1	1	0	0	0	0	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
a0001c0001t0001g0034	0/0	1	1	0	0	0	0	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
a0001c0001t0001g0035	0/0	1	1	0	0	0	0	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
a0001c0001t0001g0036	0/0	1	0	1	0	0	0	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
a0001c0001t0001g0037	0/0	1	0	1	0	0	0	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
a0001c0001t0001g0039	0/0	1	0	0	0	0	1	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
a0001c0001t0001g0040	0/0	1	1	0	0	0	0	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
a0001c0001t0001g0041	0/0	1	0	1	0	0	0	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
a0001c0001t0001g0050	0/0	1	1	0	0	0	0	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
a0001c0001t0001g0051	0/0	1	0	0	1	0	0	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
a0001c0001t0001g0054	0/0	1	0	0	1	0	0	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
a0001c0001t0001g0056	0/0	1	1	0	0	0	0	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
a0001c0001t0001g0057	0/0	1	1	0	0	0	0	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
a0001c0001t0001g0058	0/0	1	1	0	0	0	0	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
a0001c0001t0001g0059	0/0	1	1	0	0	0	0	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
a0001c0001t0001g0061	0/0	1	1	0	0	0	0	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
a0001c0001t0001g0062	0/0	1	0	1	0	0	0	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
a0001c0001t0001g0073	0/0	1	0	0	1	0	0	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
a0001c0001t0001g0075	0/0	1	0	1	0	0	0	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
a0001c0001t0001g0076	0/0	1	0	1	0	0	0	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
a0001c0001t0001g0077	0/0	1	0	1	0	0	0	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
a0001c0001t0001g0078	0/0	1	1	0	0	0	0	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
a0001c0001t0001g0080	0/0	1	0	0	0	0	1	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
a0001c0001t0001g0087	0/0	1	0	0	0	0	1	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
a0001c0001t0001g0088	0/0	1	0	0	1	0	0	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
a0001c0001t0001g0091	0/0	1	0	0	1	0	0	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
a0001c0001t0001g0092	0/0	1	1	0	0	0	0	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
a0001c0001t0001g0093	0/0	1	0	0	1	0	0	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
a0001c0001t0001g0095	0/0	1	1	0	0	0	0	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
a0001c0001t0001g0097	0/0	1	0	1	0	0	0	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
a0001c0001t0001g0098	0/0	1	0	0	0	0	1	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
a0001c0001t0001g0099	0/0	1	0	0	0	0	1	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
a0001c0001t0001g0101	0/0	1	0	0	0	0	1	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
a0001c0001t0001g0102	0/0	1	1	0	0	0	0	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
a0001c0001t0001g0103	0/0	1	1	0	0	0	0	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
a0001c0001t0001g0104	0/0	1	1	0	0	0	0	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
a0001c0001t0001g0105	0/0	1	1	0	0	0	0	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
a0001c0001t0002g0001	1/0	72	2	8	48	3	10	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
a0001c0001t0002g0004	0/0	10	1	4	5	0	0	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
a0001c0001t0002g0008	0/0	7	3	1	2	0	1	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
a0001c0001t0002g0009	0/0	7	0	1	6	0	0	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
a0001c0001t0002g0018	0/0	3	0	0	3	0	0	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
a0001c0001t0002g0021	0/0	2	0	1	1	0	0	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
a0001c0001t0002g0025	0/0	2	1	1	0	0	0	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
a0001c0001t0002g0026	0/0	2	0	0	1	0	1	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
a0001c0001t0002g0032	0/0	1	0	0	1	0	0	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
a0001c0001t0002g0049	0/0	1	0	0	1	0	0	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
a0001c0001t0002g0052	0/0	1	0	0	1	0	0	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
a0001c0001t0002g0060	0/0	1	1	0	0	0	0	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
a0001c0001t0002g0063	0/0	1	0	0	1	0	0	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
a0001c0001t0002g0064	0/0	1	0	1	0	0	0	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
a0001c0001t0002g0065	0/0	1	0	0	1	0	0	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
a0001c0001t0002g0068	0/0	1	0	0	0	0	1	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
a0001c0001t0002g0070	0/0	1	0	0	1	0	0	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
a0001c0001t0002g0072	0/0	1	0	0	1	0	0	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
a0001c0001t0002g0079	0/0	1	0	1	0	0	0	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
a0001c0001t0002g0081	0/0	1	0	0	1	0	0	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
a0001c0001t0002g0082	0/0	1	0	0	0	0	1	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
a0001c0001t0002g0085	0/0	1	0	0	1	0	0	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
a0001c0001t0002g0086	0/0	1	0	0	1	0	0	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
a0001c0001t0002g0100	0/0	1	0	1	0	0	0	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
a0001c0001t0004g0012	0/0	4	0	2	0	1	1	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
a0001c0001t0004g0038	0/0	1	0	1	0	0	0	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
a0001c0001t0005g0023	0/0	2	2	0	0	0	0	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
a0001c0001t0005g0074	0/0	1	1	0	0	0	0	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
a0001c0001t0006g0055	0/0	1	0	1	0	0	0	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
a0001c0001t0006g0071	0/0	1	0	1	0	0	0	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
a0001c0001t0008g0069	0/0	1	0	0	0	0	1	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
a0001c0001t0009g0053	0/0	1	1	0	0	0	0	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
a0001c0001t0010g0083	0/0	1	1	0	0	0	0	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
a0001c0001t0011g0096	0/0	1	0	0	1	0	0	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
a0001c0001t0012g0067	0/0	1	0	0	1	0	0	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
a0001c0001t0013g0089	0/0	1	0	0	1	0	0	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
a0001c0001t0014g0094	0/0	1	0	0	0	0	1	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
a0001c0001t0015g0090	0/0	1	0	0	1	0	0	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
a0001c0002t0003g0010	0/0	6	0	0	6	0	0	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
a0001c0002t0003g0017	0/0	3	2	1	0	0	0	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
a0001c0002t0003g0043	0/0	1	0	1	0	0	0	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
a0001c0002t0003g0044	0/0	1	0	0	1	0	0	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
a0001c0002t0003g0045	0/0	1	1	0	0	0	0	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
a0001c0002t0003g0046	0/0	1	1	0	0	0	0	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
a0001c0002t0003g0047	0/0	1	1	0	0	0	0	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
a0001c0002t0003g0048	0/0	1	0	0	0	0	1	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
a0001c0002t0003g0084	0/0	1	0	0	1	0	0	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
a0001c0002t0007g0042	0/0	1	0	0	1	0	0	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
a0002c0003t0002g0066	0/0	1	0	0	1	0	0	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334

sampleid	ID haplotypeid	ahapid	chapid	thapid	ghapid	gpopname	popname	regionname	genename	chr	start	end
HG00099	hp1	a0001	c0001	t0004	g0012	EUR	GBR	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
HG00099	hp2	a0001	c0001	t0001	g0003	EUR	GBR	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
HG00140	hp1	a0001	c0001	t0001	g0007	EUR	GBR	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
HG00280	hp1	a0001	c0001	t0002	g0001	EUR	FIN	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
HG00323	hp1	a0001	c0001	t0002	g0001	EUR	FIN	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
HG00323	hp2	a0001	c0001	t0001	g0019	EUR	FIN	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
HG00408	hp1	a0001	c0001	t0002	g0001	EAS	CHS	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
HG00408	hp2	a0001	c0001	t0002	g0001	EAS	CHS	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
HG00423	hp1	a0001	c0001	t0002	g0001	EAS	CHS	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
HG00423	hp2	a0001	c0002	t0003	g0010	EAS	CHS	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
HG00544	hp1	a0001	c0001	t0001	g0014	EAS	CHS	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
HG00544	hp2	a0001	c0001	t0002	g0001	EAS	CHS	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
HG00558	hp1	a0001	c0001	t0002	g0063	EAS	CHS	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
HG00558	hp2	a0001	c0001	t0002	g0001	EAS	CHS	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
HG00609	hp1	a0001	c0001	t0002	g0001	EAS	CHS	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
HG00621	hp1	a0001	c0001	t0002	g0001	EAS	CHS	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
HG00639	hp1	a0001	c0001	t0002	g0001	AMR	PUR	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
HG00639	hp2	a0001	c0001	t0001	g0002	AMR	PUR	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
HG00642	hp1	a0001	c0001	t0004	g0012	AMR	PUR	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
HG00673	hp1	a0001	c0001	t0001	g0027	EAS	CHS	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
HG00733	hp1	a0001	c0001	t0002	g0001	AMR	PUR	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
HG00733	hp2	a0001	c0001	t0001	g0037	AMR	PUR	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
HG00735	hp1	a0001	c0002	t0003	g0017	AMR	PUR	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
HG00735	hp2	a0001	c0001	t0002	g0001	AMR	PUR	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
HG00738	hp1	a0001	c0001	t0001	g0041	AMR	PUR	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
HG00741	hp1	a0001	c0001	t0001	g0003	AMR	PUR	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
HG00741	hp2	a0001	c0001	t0002	g0064	AMR	PUR	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
HG01069	hp1	a0001	c0001	t0001	g0015	AMR	PUR	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
HG01070	hp1	a0001	c0001	t0001	g0036	AMR	PUR	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
HG01070	hp2	a0001	c0001	t0002	g0004	AMR	PUR	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
HG01071	hp1	a0001	c0001	t0002	g0001	AMR	PUR	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
HG01071	hp2	a0001	c0001	t0001	g0015	AMR	PUR	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
HG01074	hp1	a0001	c0001	t0002	g0001	AMR	PUR	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
HG01081	hp1	a0001	c0001	t0001	g0007	AMR	PUR	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
HG01081	hp2	a0001	c0002	t0003	g0043	AMR	PUR	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
HG01099	hp1	a0001	c0001	t0001	g0007	AMR	PUR	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
HG01106	hp1	a0001	c0001	t0001	g0007	AMR	PUR	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
HG01109	hp1	a0001	c0001	t0001	g0077	AMR	PUR	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
HG01167	hp1	a0001	c0001	t0006	g0071	AMR	PUR	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
HG01168	hp1	a0001	c0001	t0001	g0002	AMR	PUR	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
HG01168	hp2	a0001	c0001	t0004	g0038	AMR	PUR	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
HG01169	hp1	a0001	c0001	t0001	g0013	AMR	PUR	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
HG01169	hp2	a0001	c0001	t0006	g0055	AMR	PUR	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
HG01175	hp1	a0001	c0001	t0001	g0003	AMR	PUR	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
HG01175	hp2	a0001	c0001	t0001	g0007	AMR	PUR	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
HG01192	hp1	a0001	c0001	t0001	g0007	AMR	PUR	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
HG01243	hp1	a0001	c0001	t0002	g0079	AMR	PUR	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
HG01255	hp1	a0001	c0001	t0002	g0025	AMR	CLM	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
HG01256	hp1	a0001	c0001	t0001	g0013	AMR	CLM	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
HG01257	hp1	a0001	c0001	t0002	g0004	AMR	CLM	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
HG01257	hp2	a0001	c0001	t0001	g0076	AMR	CLM	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
HG01258	hp1	a0001	c0001	t0001	g0002	AMR	CLM	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
HG01261	hp1	a0001	c0001	t0002	g0100	AMR	CLM	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
HG01358	hp1	a0001	c0001	t0002	g0004	AMR	CLM	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
HG01361	hp1	a0001	c0001	t0002	g0009	AMR	CLM	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
HG01361	hp2	a0001	c0001	t0001	g0002	AMR	CLM	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
HG01433	hp1	a0001	c0001	t0001	g0097	AMR	CLM	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
HG01496	hp1	a0001	c0001	t0001	g0002	AMR	CLM	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
HG01496	hp2	a0001	c0001	t0002	g0001	AMR	CLM	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
HG01515	hp1	a0001	c0001	t0002	g0001	EUR	IBS	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
HG01884	hp1	a0001	c0001	t0010	g0083	AFR	ACB	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
HG01884	hp2	a0001	c0001	t0001	g0024	AFR	ACB	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
HG01891	hp1	a0001	c0001	t0001	g0011	AFR	ACB	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
HG01891	hp2	a0001	c0001	t0001	g0003	AFR	ACB	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
HG01928	hp1	a0001	c0001	t0002	g0008	AMR	PEL	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
HG01934	hp1	a0001	c0001	t0001	g0002	AMR	PEL	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
HG01943	hp1	a0001	c0001	t0001	g0002	AMR	PEL	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
HG01952	hp1	a0001	c0001	t0001	g0002	AMR	PEL	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
HG01975	hp1	a0001	c0001	t0001	g0002	AMR	PEL	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
HG01975	hp2	a0001	c0001	t0002	g0004	AMR	PEL	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
HG01978	hp1	a0001	c0001	t0002	g0001	AMR	PEL	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
HG01978	hp2	a0001	c0001	t0001	g0062	AMR	PEL	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
HG01981	hp1	a0001	c0001	t0001	g0002	AMR	PEL	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
HG01981	hp2	a0001	c0001	t0001	g0002	AMR	PEL	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
HG01993	hp1	a0001	c0001	t0001	g0002	AMR	PEL	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
HG01993	hp2	a0001	c0001	t0002	g0021	AMR	PEL	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
HG02015	hp1	a0001	c0001	t0001	g0024	EAS	KHV	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
HG02027	hp1	a0001	c0001	t0002	g0001	EAS	KHV	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
HG02040	hp1	a0001	c0001	t0002	g0001	EAS	KHV	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
HG02055	hp1	a0001	c0001	t0001	g0006	AFR	ACB	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
HG02056	hp1	a0001	c0001	t0001	g0014	EAS	KHV	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
HG02071	hp1	a0001	c0001	t0002	g0018	EAS	KHV	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
HG02074	hp1	a0001	c0001	t0001	g0015	EAS	KHV	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
HG02080	hp1	a0001	c0001	t0002	g0001	EAS	KHV	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
HG02080	hp2	a0001	c0001	t0001	g0002	EAS	KHV	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
HG02083	hp1	a0001	c0001	t0002	g0001	EAS	KHV	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
HG02129	hp1	a0001	c0001	t0002	g0001	EAS	KHV	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
HG02132	hp1	a0001	c0001	t0002	g0001	EAS	KHV	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
HG02135	hp1	a0001	c0001	t0002	g0001	EAS	KHV	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
HG02145	hp1	a0001	c0001	t0005	g0023	AFR	ACB	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
HG02148	hp1	a0001	c0001	t0001	g0075	AMR	PEL	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
HG02148	hp2	a0001	c0001	t0001	g0014	AMR	PEL	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
HG02155	hp1	a0001	c0001	t0001	g0002	EAS	CDX	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
HG02155	hp2	a0001	c0001	t0001	g0031	EAS	CDX	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
HG02165	hp1	a0001	c0001	t0001	g0002	EAS	CDX	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
HG02165	hp2	a0001	c0001	t0001	g0005	EAS	CDX	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
HG02258	hp1	a0001	c0001	t0001	g0035	AFR	ACB	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
HG02273	hp1	a0001	c0001	t0001	g0013	AMR	PEL	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
HG02273	hp2	a0001	c0001	t0001	g0002	AMR	PEL	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
HG02280	hp1	a0001	c0001	t0001	g0057	AFR	ACB	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
HG02280	hp2	a0001	c0001	t0001	g0006	AFR	ACB	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
HG02293	hp1	a0001	c0001	t0001	g0002	AMR	PEL	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
HG02293	hp2	a0001	c0001	t0002	g0001	AMR	PEL	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
HG02451	hp1	a0001	c0001	t0001	g0056	AFR	ACB	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
HG02451	hp2	a0001	c0001	t0002	g0001	AFR	ACB	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
HG02523	hp1	a0001	c0001	t0001	g0005	EAS	KHV	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
HG02523	hp2	a0001	c0001	t0002	g0001	EAS	KHV	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
HG02572	hp1	a0001	c0001	t0001	g0011	AFR	GWD	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
HG02602	hp1	a0001	c0001	t0002	g0001	SAS	PJL	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
HG02622	hp1	a0001	c0001	t0001	g0006	AFR	GWD	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
HG02622	hp2	a0001	c0001	t0001	g0003	AFR	GWD	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
HG02630	hp1	a0001	c0001	t0001	g0016	AFR	GWD	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
HG02630	hp2	a0001	c0001	t0001	g0040	AFR	GWD	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
HG02647	hp1	a0001	c0001	t0001	g0020	AFR	GWD	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
HG02683	hp1	a0001	c0001	t0001	g0039	SAS	PJL	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
HG02683	hp2	a0001	c0001	t0001	g0080	SAS	PJL	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
HG02698	hp1	a0001	c0001	t0001	g0003	SAS	PJL	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
HG02717	hp1	a0001	c0001	t0002	g0008	AFR	GWD	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
HG02735	hp1	a0001	c0001	t0002	g0001	SAS	PJL	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
HG02738	hp1	a0001	c0001	t0002	g0082	SAS	PJL	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
HG02809	hp1	a0001	c0001	t0001	g0020	AFR	GWD	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
HG02809	hp2	a0001	c0001	t0009	g0053	AFR	GWD	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
HG02886	hp1	a0001	c0001	t0001	g0033	AFR	GWD	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
HG02886	hp2	a0001	c0001	t0001	g0006	AFR	GWD	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
HG02895	hp1	a0001	c0001	t0001	g0019	AFR	GWD	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
HG02896	hp1	a0001	c0001	t0001	g0102	AFR	GWD	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
HG02896	hp2	a0001	c0001	t0001	g0011	AFR	GWD	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
HG02897	hp1	a0001	c0001	t0001	g0011	AFR	GWD	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
HG02897	hp2	a0001	c0001	t0001	g0003	AFR	GWD	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
HG02922	hp1	a0001	c0001	t0001	g0003	AFR	ESN	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
HG02922	hp2	a0001	c0001	t0002	g0004	AFR	ESN	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
HG02965	hp1	a0001	c0001	t0001	g0003	AFR	ESN	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
HG02970	hp1	a0001	c0002	t0003	g0017	AFR	ESN	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
HG02970	hp2	a0001	c0001	t0001	g0103	AFR	ESN	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
HG02976	hp1	a0001	c0001	t0001	g0105	AFR	ESN	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
HG02976	hp2	a0001	c0001	t0002	g0008	AFR	ESN	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
HG03017	hp1	a0001	c0001	t0001	g0087	SAS	PJL	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
HG03041	hp1	a0001	c0001	t0005	g0074	AFR	GWD	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
HG03041	hp2	a0001	c0001	t0001	g0003	AFR	GWD	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
HG03098	hp1	a0001	c0001	t0002	g0025	AFR	MSL	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
HG03130	hp1	a0001	c0001	t0001	g0059	AFR	ESN	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
HG03139	hp1	a0001	c0001	t0001	g0020	AFR	ESN	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
HG03195	hp1	a0001	c0002	t0003	g0017	AFR	ESN	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
HG03195	hp2	a0001	c0001	t0001	g0006	AFR	ESN	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
HG03209	hp1	a0001	c0001	t0001	g0011	AFR	MSL	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
HG03225	hp1	a0001	c0001	t0001	g0003	AFR	MSL	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
HG03239	hp1	a0001	c0001	t0002	g0026	SAS	PJL	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
HG03239	hp2	a0001	c0001	t0001	g0003	SAS	PJL	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
HG03453	hp1	a0001	c0001	t0001	g0022	AFR	MSL	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
HG03453	hp2	a0001	c0001	t0005	g0023	AFR	MSL	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
HG03486	hp1	a0001	c0001	t0001	g0003	AFR	MSL	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
HG03486	hp2	a0001	c0001	t0001	g0058	AFR	MSL	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
HG03490	hp1	a0001	c0001	t0001	g0030	SAS	PJL	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
HG03491	hp1	a0001	c0001	t0002	g0001	SAS	PJL	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
HG03491	hp2	a0001	c0001	t0002	g0001	SAS	PJL	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
HG03492	hp1	a0001	c0001	t0002	g0001	SAS	PJL	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
HG03516	hp1	a0001	c0001	t0001	g0050	AFR	ESN	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
HG03516	hp2	a0001	c0002	t0003	g0046	AFR	ESN	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
HG03540	hp1	a0001	c0001	t0001	g0003	AFR	GWD	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
HG03540	hp2	a0001	c0001	t0001	g0022	AFR	GWD	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
HG03579	hp1	a0001	c0001	t0001	g0016	AFR	MSL	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
HG03654	hp1	a0001	c0001	t0001	g0005	SAS	PJL	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
HG03669	hp1	a0001	c0001	t0002	g0001	SAS	PJL	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
HG03669	hp2	a0001	c0001	t0004	g0012	SAS	PJL	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
HG03688	hp1	a0001	c0001	t0002	g0001	SAS	STU	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
HG03710	hp1	a0001	c0001	t0001	g0099	SAS	PJL	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
HG03831	hp1	a0001	c0001	t0001	g0101	SAS	BEB	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
HG03831	hp2	a0001	c0001	t0002	g0008	SAS	BEB	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
HG03834	hp1	a0001	c0002	t0003	g0048	SAS	BEB	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
HG03834	hp2	a0001	c0001	t0001	g0003	SAS	BEB	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
HG03942	hp1	a0001	c0001	t0001	g0098	SAS	BEB	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
HG04115	hp1	a0001	c0001	t0001	g0002	SAS	STU	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
HG04184	hp1	a0001	c0001	t0002	g0068	SAS	BEB	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
HG04184	hp2	a0001	c0001	t0014	g0094	SAS	BEB	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
HG04199	hp1	a0001	c0001	t0008	g0069	SAS	STU	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
HG04204	hp1	a0001	c0001	t0002	g0001	SAS	STU	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
HG04228	hp1	a0001	c0001	t0002	g0001	SAS	STU	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
NA18522	hp1	a0001	c0001	t0001	g0034	AFR	YRI	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
NA18612	hp1	a0001	c0001	t0002	g0004	EAS	CHB	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
NA18747	hp1	a0001	c0001	t0002	g0001	EAS	CHB	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
NA18906	hp1	a0001	c0001	t0001	g0095	AFR	YRI	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
NA18906	hp2	a0001	c0001	t0002	g0060	AFR	YRI	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
NA18939	hp1	a0001	c0001	t0001	g0002	EAS	JPT	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
NA18939	hp2	a0001	c0001	t0002	g0001	EAS	JPT	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
NA18940	hp1	a0001	c0001	t0002	g0021	EAS	JPT	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
NA18941	hp1	a0001	c0001	t0002	g0009	EAS	JPT	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
NA18941	hp2	a0001	c0001	t0001	g0005	EAS	JPT	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
NA18942	hp1	a0001	c0001	t0001	g0002	EAS	JPT	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
NA18942	hp2	a0001	c0001	t0002	g0004	EAS	JPT	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
NA18943	hp1	a0001	c0001	t0002	g0026	EAS	JPT	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
NA18944	hp1	a0001	c0001	t0002	g0001	EAS	JPT	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
NA18945	hp1	a0001	c0001	t0001	g0002	EAS	JPT	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
NA18946	hp1	a0001	c0001	t0002	g0001	EAS	JPT	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
NA18946	hp2	a0001	c0001	t0002	g0001	EAS	JPT	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
NA18947	hp1	a0001	c0001	t0002	g0001	EAS	JPT	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
NA18947	hp2	a0001	c0001	t0001	g0093	EAS	JPT	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
NA18948	hp1	a0001	c0001	t0002	g0001	EAS	JPT	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
NA18950	hp1	a0001	c0001	t0001	g0002	EAS	JPT	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
NA18950	hp2	a0001	c0001	t0002	g0001	EAS	JPT	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
NA18951	hp1	a0001	c0001	t0002	g0008	EAS	JPT	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
NA18951	hp2	a0001	c0001	t0001	g0054	EAS	JPT	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
NA18952	hp1	a0001	c0002	t0003	g0010	EAS	JPT	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
NA18953	hp1	a0001	c0001	t0001	g0002	EAS	JPT	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
NA18957	hp1	a0001	c0001	t0001	g0005	EAS	JPT	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
NA18957	hp2	a0001	c0001	t0001	g0002	EAS	JPT	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
NA18959	hp1	a0001	c0001	t0002	g0004	EAS	JPT	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
NA18960	hp1	a0001	c0001	t0002	g0009	EAS	JPT	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
NA18961	hp1	a0001	c0001	t0002	g0070	EAS	JPT	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
NA18962	hp1	a0001	c0001	t0002	g0001	EAS	JPT	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
NA18965	hp1	a0001	c0001	t0001	g0073	EAS	JPT	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
NA18966	hp1	a0001	c0001	t0002	g0086	EAS	JPT	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
NA18967	hp1	a0001	c0001	t0002	g0032	EAS	JPT	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
NA18968	hp1	a0001	c0001	t0001	g0029	EAS	JPT	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
NA18968	hp2	a0001	c0001	t0002	g0081	EAS	JPT	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
NA18969	hp1	a0001	c0001	t0002	g0001	EAS	JPT	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
NA18969	hp2	a0001	c0001	t0002	g0009	EAS	JPT	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
NA18970	hp1	a0001	c0001	t0002	g0009	EAS	JPT	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
NA18971	hp1	a0001	c0001	t0002	g0001	EAS	JPT	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
NA18974	hp1	a0001	c0001	t0001	g0013	EAS	JPT	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
NA18977	hp1	a0001	c0001	t0002	g0018	EAS	JPT	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
NA18978	hp1	a0001	c0001	t0002	g0001	EAS	JPT	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
NA18978	hp2	a0001	c0001	t0002	g0009	EAS	JPT	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
NA18980	hp1	a0001	c0002	t0003	g0010	EAS	JPT	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
NA18980	hp2	a0001	c0001	t0001	g0005	EAS	JPT	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
NA18981	hp1	a0001	c0001	t0002	g0004	EAS	JPT	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
NA18981	hp2	a0001	c0001	t0001	g0005	EAS	JPT	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
NA18982	hp1	a0001	c0001	t0002	g0001	EAS	JPT	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
NA18983	hp1	a0001	c0001	t0002	g0065	EAS	JPT	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
NA18984	hp1	a0001	c0001	t0002	g0001	EAS	JPT	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
NA18986	hp1	a0001	c0001	t0002	g0001	EAS	JPT	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
NA18988	hp1	a0001	c0001	t0001	g0091	EAS	JPT	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
NA18989	hp1	a0001	c0001	t0002	g0004	EAS	JPT	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
NA18990	hp1	a0001	c0001	t0002	g0001	EAS	JPT	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
NA18991	hp1	a0001	c0001	t0001	g0027	EAS	JPT	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
NA18991	hp2	a0001	c0001	t0002	g0001	EAS	JPT	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
NA18993	hp1	a0001	c0001	t0001	g0014	EAS	JPT	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
NA18993	hp2	a0001	c0001	t0002	g0001	EAS	JPT	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
NA18994	hp1	a0001	c0001	t0002	g0052	EAS	JPT	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
NA18995	hp1	a0001	c0001	t0002	g0001	EAS	JPT	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
NA18999	hp1	a0001	c0002	t0003	g0010	EAS	JPT	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
NA18999	hp2	a0001	c0001	t0001	g0088	EAS	JPT	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
NA19000	hp1	a0001	c0001	t0002	g0001	EAS	JPT	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
NA19004	hp1	a0001	c0001	t0002	g0001	EAS	JPT	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
NA19005	hp1	a0001	c0001	t0001	g0002	EAS	JPT	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
NA19006	hp1	a0001	c0001	t0002	g0001	EAS	JPT	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
NA19007	hp1	a0001	c0001	t0001	g0002	EAS	JPT	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
NA19009	hp1	a0001	c0002	t0003	g0010	EAS	JPT	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
NA19012	hp1	a0001	c0002	t0003	g0044	EAS	JPT	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
NA19030	hp1	a0001	c0001	t0001	g0003	AFR	LWK	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
NA19030	hp2	a0001	c0001	t0001	g0006	AFR	LWK	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
NA19043	hp1	a0001	c0001	t0001	g0019	AFR	LWK	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
NA19054	hp1	a0001	c0001	t0001	g0002	EAS	JPT	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
NA19054	hp2	a0001	c0001	t0002	g0001	EAS	JPT	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
NA19055	hp1	a0001	c0001	t0002	g0001	EAS	JPT	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
NA19056	hp1	a0001	c0001	t0001	g0002	EAS	JPT	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
NA19058	hp1	a0001	c0001	t0011	g0096	EAS	JPT	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
NA19062	hp1	a0001	c0001	t0002	g0001	EAS	JPT	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
NA19063	hp1	a0001	c0001	t0002	g0085	EAS	JPT	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
NA19064	hp1	a0001	c0001	t0002	g0001	EAS	JPT	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
NA19064	hp2	a0001	c0001	t0001	g0002	EAS	JPT	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
NA19066	hp1	a0001	c0001	t0001	g0028	EAS	JPT	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
NA19067	hp1	a0001	c0001	t0013	g0089	EAS	JPT	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
NA19068	hp1	a0001	c0001	t0002	g0001	EAS	JPT	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
NA19070	hp1	a0001	c0001	t0002	g0001	EAS	JPT	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
NA19072	hp1	a0001	c0001	t0002	g0072	EAS	JPT	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
NA19074	hp1	a0001	c0001	t0012	g0067	EAS	JPT	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
NA19074	hp2	a0001	c0001	t0002	g0001	EAS	JPT	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
NA19075	hp1	a0001	c0001	t0002	g0018	EAS	JPT	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
NA19076	hp1	a0001	c0001	t0001	g0051	EAS	JPT	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
NA19078	hp1	a0001	c0001	t0001	g0005	EAS	JPT	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
NA19078	hp2	a0001	c0001	t0002	g0049	EAS	JPT	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
NA19079	hp1	a0001	c0001	t0001	g0028	EAS	JPT	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
NA19081	hp1	a0001	c0001	t0002	g0001	EAS	JPT	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
NA19081	hp2	a0001	c0002	t0003	g0084	EAS	JPT	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
NA19082	hp1	a0001	c0001	t0002	g0009	EAS	JPT	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
NA19083	hp1	a0001	c0001	t0001	g0005	EAS	JPT	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
NA19085	hp1	a0001	c0001	t0002	g0001	EAS	JPT	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
NA19086	hp1	a0001	c0001	t0002	g0008	EAS	JPT	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
NA19087	hp1	a0002	c0003	t0002	g0066	EAS	JPT	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
NA19087	hp2	a0001	c0002	t0003	g0010	EAS	JPT	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
NA19088	hp1	a0001	c0001	t0001	g0029	EAS	JPT	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
NA19089	hp1	a0001	c0002	t0007	g0042	EAS	JPT	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
NA19090	hp1	a0001	c0001	t0001	g0005	EAS	JPT	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
NA19090	hp2	a0001	c0001	t0015	g0090	EAS	JPT	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
NA19091	hp1	a0001	c0001	t0002	g0001	EAS	JPT	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
NA19240	hp1	a0001	c0002	t0003	g0047	AFR	YRI	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
NA19240	hp2	a0001	c0001	t0002	g0008	AFR	YRI	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
NA20129	hp1	a0001	c0001	t0001	g0078	AFR	ASW	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
NA20129	hp2	a0001	c0001	t0001	g0006	AFR	ASW	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
NA20752	hp1	a0001	c0001	t0001	g0003	EUR	TSI	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
NA20805	hp1	a0001	c0001	t0001	g0007	EUR	TSI	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
NA20905	hp1	a0001	c0001	t0002	g0001	SAS	GIH	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
HG01123	hp1	a0001	c0001	t0004	g0012	AMR	CLM	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
HG01123	hp2	a0001	c0001	t0001	g0002	AMR	CLM	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
HG02109	hp1	a0001	c0001	t0001	g0003	AFR	ACB	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
HG02109	hp2	a0001	c0002	t0003	g0045	AFR	ACB	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
HG02486	hp1	a0001	c0001	t0001	g0092	AFR	ACB	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
HG02559	hp1	a0001	c0001	t0001	g0003	AFR	ACB	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
HG02559	hp2	a0001	c0001	t0001	g0006	AFR	ACB	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
HG03471	hp1	a0001	c0001	t0001	g0003	AFR	MSL	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
HG06807	hp1	a0001	c0001	t0001	g0061	AFR	USA	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
HG06807	hp2	a0001	c0001	t0001	g0003	AFR	USA	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
NA18955	hp1	a0001	c0001	t0002	g0001	EAS	JPT	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
NA20300	hp1	a0001	c0001	t0002	g0001	AFR	USA	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
NA20300	hp2	a0001	c0001	t0001	g0003	AFR	USA	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
NA21309	hp1	a0001	c0001	t0001	g0016	AFR	LWK	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
NA21309	hp2	a0001	c0001	t0001	g0104	AFR	LWK	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
homoSapiens_chm13v2	hp1	a0001	c0001	t0001	g0003	REF	REF	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334
homoSapiens_grch38	hp1	a0001	c0001	t0002	g0001	REF	REF	SNX12_chrX_71054247_71073334	SNX12	chrX	71054247	71073334

chr:pos	ref	alt	# # of ahapid:amino-acid(protein) level	ahapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	hgvs_p	genename	geneid	featuretype	featureid	transcript_biotype	rank	cdna cdna pos length	cds cds pos length	aa aa pos length	distance	status	chr	pos
chrX:71061960	A A	T T	1	a0002 a0002	1	NA19087.hp1 NA19087.hp1	missense_variant	MODERATE	c.269T>A c.269T>A	p.Val90Glu p.Val90Glu	SNX12	ENSG00000147164.12	transcript	ENST00000374274.8	protein_coding	3/4	297/2286	269/489	90/162			chrX	71061960

chr:pos	ref	alt	# # of chapid	chapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	hgvs_p	genename	geneid	featuretype	featureid	transcript_biotype	rank	cdna cdna pos length	cds cds pos length	aa aa pos length	distance	status	chr	pos
chrX:71062914	G G	A A	1	a0001c0002 a0001c0002	17	HG00423.hp2 HG00735.hp1 HG01081.hp2 others(14): Show HG00423.hp2 HG00735.hp1 HG01081.hp2 HG02109.hp2 HG02970.hp1 HG03195.hp1 HG03516.hp2 HG03834.hp1 NA18952.hp1 NA18980.hp1 NA18999.hp1 NA19009.hp1 NA19012.hp1 NA19081.hp2 NA19087.hp2 NA19089.hp1 NA19240.hp1	synonymous_variant	LOW	c.201C>T c.201C>T	p.Cys67Cys p.Cys67Cys	SNX12	ENSG00000147164.12	transcript	ENST00000374274.8	protein_coding	2/4	229/2286	201/489	67/162			chrX	71062914

chr:pos	ref	alt	# # of thapid:transcript level	thapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	chr	pos
chrX:71059277	T T	C C	1	a0001c0001t0012 a0001c0001t0012	1	NA19074.hp1 NA19074.hp1	3_prime_UTR_variant	MODIFIER	c.1739A>G c.1739A>G	SNX12	ENSG00000147164.12	transcript	ENST00000374274.8	protein_coding	4/4	1739	chrX	71059277
chrX:71059319	A A	G G	1	a0001c0001t0006 a0001c0001t0006	2	HG01167.hp1 HG01169.hp2 HG01167.hp1 HG01169.hp2	3_prime_UTR_variant	MODIFIER	c.1697T>C c.1697T>C	SNX12	ENSG00000147164.12	transcript	ENST00000374274.8	protein_coding	4/4	1697	chrX	71059319
chrX:71059322	A A	T T	1	a0001c0001t0004 a0001c0001t0004	5	HG00099.hp1 HG00642.hp1 HG01123.hp1 others(2): Show HG00099.hp1 HG00642.hp1 HG01123.hp1 HG01168.hp2 HG03669.hp2	3_prime_UTR_variant	MODIFIER	c.1694T>A c.1694T>A	SNX12	ENSG00000147164.12	transcript	ENST00000374274.8	protein_coding	4/4	1694	chrX	71059322
chrX:71059327	C C	G G	1	a0001c0001t0004 a0001c0001t0004	5	HG00099.hp1 HG00642.hp1 HG01123.hp1 others(2): Show HG00099.hp1 HG00642.hp1 HG01123.hp1 HG01168.hp2 HG03669.hp2	3_prime_UTR_variant	MODIFIER	c.1689G>C c.1689G>C	SNX12	ENSG00000147164.12	transcript	ENST00000374274.8	protein_coding	4/4	1689	chrX	71059327
chrX:71059362	G G	C C	1	a0001c0001t0011 a0001c0001t0011	1	NA19058.hp1 NA19058.hp1	3_prime_UTR_variant	MODIFIER	c.1654C>G c.1654C>G	SNX12	ENSG00000147164.12	transcript	ENST00000374274.8	protein_coding	4/4	1654	chrX	71059362
chrX:71059642	A A	C C	10	a0001c0001t0001 a0001c0001t0004 a0001c0001t0005 others(7): Show a0001c0001t0001 a0001c0001t0004 a0001c0001t0005 a0001c0001t0006 a0001c0001t0009 a0001c0001t0010 a0001c0001t0011 a0001c0001t0014 a0001c0002t0003 a0001c0002t0007	183	HG00099.hp1 HG00099.hp2 HG00140.hp1 others(180): Show HG00099.hp1 HG00099.hp2 HG00140.hp1 HG00323.hp2 HG00423.hp2 HG00544.hp1 HG00639.hp2 HG00642.hp1 HG00673.hp1 HG00733.hp2 HG00735.hp1 HG00738.hp1 HG00741.hp1 HG01069.hp1 HG01070.hp1 HG01071.hp2 HG01081.hp1 HG01081.hp2 HG01099.hp1 HG01106.hp1 HG01109.hp1 HG01123.hp1 HG01123.hp2 HG01167.hp1 HG01168.hp1 HG01168.hp2 HG01169.hp1 HG01169.hp2 HG01175.hp1 HG01175.hp2 HG01192.hp1 HG01256.hp1 HG01257.hp2 HG01258.hp1 HG01361.hp2 HG01433.hp1 HG01496.hp1 HG01884.hp1 HG01884.hp2 HG01891.hp1 HG01891.hp2 HG01934.hp1 HG01943.hp1 HG01952.hp1 HG01975.hp1 HG01978.hp2 HG01981.hp1 HG01981.hp2 HG01993.hp1 HG02015.hp1 HG02055.hp1 HG02056.hp1 HG02074.hp1 HG02080.hp2 HG02109.hp1 HG02109.hp2 HG02145.hp1 HG02148.hp1 HG02148.hp2 HG02155.hp1 HG02155.hp2 HG02165.hp1 HG02165.hp2 HG02258.hp1 HG02273.hp1 HG02273.hp2 HG02280.hp1 HG02280.hp2 HG02293.hp1 HG02451.hp1 HG02486.hp1 HG02523.hp1 HG02559.hp1 HG02559.hp2 HG02572.hp1 HG02622.hp1 HG02622.hp2 HG02630.hp1 HG02630.hp2 HG02647.hp1 HG02683.hp1 HG02683.hp2 HG02698.hp1 HG02809.hp1 HG02809.hp2 HG02886.hp1 HG02886.hp2 HG02895.hp1 HG02896.hp1 HG02896.hp2 HG02897.hp1 HG02897.hp2 HG02922.hp1 HG02965.hp1 HG02970.hp1 HG02970.hp2 HG02976.hp1 HG03017.hp1 HG03041.hp1 HG03041.hp2 HG03130.hp1 HG03139.hp1 HG03195.hp1 HG03195.hp2 HG03209.hp1 HG03225.hp1 HG03239.hp2 HG03453.hp1 HG03453.hp2 HG03471.hp1 HG03486.hp1 HG03486.hp2 HG03490.hp1 HG03516.hp1 HG03516.hp2 HG03540.hp1 HG03540.hp2 HG03579.hp1 HG03654.hp1 HG03669.hp2 HG03710.hp1 HG03831.hp1 HG03834.hp1 HG03834.hp2 HG03942.hp1 HG04115.hp1 HG04184.hp2 HG06807.hp1 HG06807.hp2 NA18522.hp1 NA18906.hp1 NA18939.hp1 NA18941.hp2 NA18942.hp1 NA18945.hp1 NA18947.hp2 NA18950.hp1 NA18951.hp2 NA18952.hp1 NA18953.hp1 NA18957.hp1 NA18957.hp2 NA18965.hp1 NA18968.hp1 NA18974.hp1 NA18980.hp1 NA18980.hp2 NA18981.hp2 NA18988.hp1 NA18991.hp1 NA18993.hp1 NA18999.hp1 NA18999.hp2 NA19005.hp1 NA19007.hp1 NA19009.hp1 NA19012.hp1 NA19030.hp1 NA19030.hp2 NA19043.hp1 NA19054.hp1 NA19056.hp1 NA19058.hp1 NA19064.hp2 NA19066.hp1 NA19076.hp1 NA19078.hp1 NA19079.hp1 NA19081.hp2 NA19083.hp1 NA19087.hp2 NA19088.hp1 NA19089.hp1 NA19090.hp1 NA19240.hp1 NA20129.hp1 NA20129.hp2 NA20300.hp2 NA20752.hp1 NA20805.hp1 NA21309.hp1 NA21309.hp2 homoSapiens_chm13v2.hp1	3_prime_UTR_variant	MODIFIER	c.1374T>G c.1374T>G	SNX12	ENSG00000147164.12	transcript	ENST00000374274.8	protein_coding	4/4	1374	chrX	71059642
chrX:71059742	C C	CACCA CACCA	1	a0001c0002t0007 a0001c0002t0007	1	NA19089.hp1 NA19089.hp1	3_prime_UTR_variant	MODIFIER	c.1270_1273dupTGGT c.1270_1273dupTGGT	SNX12	ENSG00000147164.12	transcript	ENST00000374274.8	protein_coding	4/4	1273	chrX	71059742
chrX:71059950	T T	TG TG	1	a0001c0001t0013 a0001c0001t0013	1	NA19067.hp1 NA19067.hp1	3_prime_UTR_variant	MODIFIER	c.1065dupC c.1065dupC	SNX12	ENSG00000147164.12	transcript	ENST00000374274.8	protein_coding	4/4	1065	chrX	71059950
chrX:71059962	CA CA	C C	1	a0001c0002t0007 a0001c0002t0007	1	NA19089.hp1 NA19089.hp1	3_prime_UTR_variant	MODIFIER	c.1053delT c.1053delT	SNX12	ENSG00000147164.12	transcript	ENST00000374274.8	protein_coding	4/4	1053	chrX	71059962
chrX:71060120	G G	T T	1	a0001c0001t0010 a0001c0001t0010	1	HG01884.hp1 HG01884.hp1	3_prime_UTR_variant	MODIFIER	c.896C>A c.896C>A	SNX12	ENSG00000147164.12	transcript	ENST00000374274.8	protein_coding	4/4	896	chrX	71060120
chrX:71060266	T T	A A	1	a0001c0001t0014 a0001c0001t0014	1	HG04184.hp2 HG04184.hp2	3_prime_UTR_variant	MODIFIER	c.750A>T c.750A>T	SNX12	ENSG00000147164.12	transcript	ENST00000374274.8	protein_coding	4/4	750	chrX	71060266
chrX:71060359	A A	G G	1	a0001c0001t0005 a0001c0001t0005	3	HG02145.hp1 HG03041.hp1 HG03453.hp2 HG02145.hp1 HG03041.hp1 HG03453.hp2	3_prime_UTR_variant	MODIFIER	c.657T>C c.657T>C	SNX12	ENSG00000147164.12	transcript	ENST00000374274.8	protein_coding	4/4	657	chrX	71060359
chrX:71060646	A A	G G	1	a0001c0001t0009 a0001c0001t0009	1	HG02809.hp2 HG02809.hp2	3_prime_UTR_variant	MODIFIER	c.370T>C c.370T>C	SNX12	ENSG00000147164.12	transcript	ENST00000374274.8	protein_coding	4/4	370	chrX	71060646
chrX:71060718	G G	A A	2	a0001c0002t0003 a0001c0002t0007 a0001c0002t0003 a0001c0002t0007	17	HG00423.hp2 HG00735.hp1 HG01081.hp2 others(14): Show HG00423.hp2 HG00735.hp1 HG01081.hp2 HG02109.hp2 HG02970.hp1 HG03195.hp1 HG03516.hp2 HG03834.hp1 NA18952.hp1 NA18980.hp1 NA18999.hp1 NA19009.hp1 NA19012.hp1 NA19081.hp2 NA19087.hp2 NA19089.hp1 NA19240.hp1	3_prime_UTR_variant	MODIFIER	c.298C>T c.298C>T	SNX12	ENSG00000147164.12	transcript	ENST00000374274.8	protein_coding	4/4	298	chrX	71060718
chrX:71060769	T T	TC TC	1	a0001c0001t0015 a0001c0001t0015	1	NA19090.hp2 NA19090.hp2	3_prime_UTR_variant	MODIFIER	c.246dupG c.246dupG	SNX12	ENSG00000147164.12	transcript	ENST00000374274.8	protein_coding	4/4	246	chrX	71060769
chrX:71060793	C C	T T	1	a0001c0001t0008 a0001c0001t0008	1	HG04199.hp1 HG04199.hp1	3_prime_UTR_variant	MODIFIER	c.223G>A c.223G>A	SNX12	ENSG00000147164.12	transcript	ENST00000374274.8	protein_coding	4/4	223	chrX	71060793
chrX:71060801	A A	AG AG	1	a0001c0002t0007 a0001c0002t0007	1	NA19089.hp1 NA19089.hp1	3_prime_UTR_variant	MODIFIER	c.214dupC c.214dupC	SNX12	ENSG00000147164.12	transcript	ENST00000374274.8	protein_coding	4/4	214	chrX	71060801

chr:pos	ref	alt	# # of ghapid:genebody level	ghapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	genename	geneid	featuretype	featureid	genebody_biotype	rank	chr	pos
chrX:71061150	AT AT	A A	1	a0001c0002t0007g0042 a0001c0002t0007g0042	1	NA19089.hp1 NA19089.hp1	intron_variant	MODIFIER	c.387-33delA c.387-33delA	SNX12	ENSG00000147164.12	transcript	ENST00000374274.8	protein_coding	3/3	chrX	71061150
chrX:71061334	T T	C C	1	a0001c0001t0010g0083 a0001c0001t0010g0083	1	HG01884.hp1 HG01884.hp1	intron_variant	MODIFIER	c.387-216A>G c.387-216A>G	SNX12	ENSG00000147164.12	transcript	ENST00000374274.8	protein_coding	3/3	chrX	71061334
chrX:71061417	T T	TG TG	1	a0001c0002t0007g0042 a0001c0002t0007g0042	1	NA19089.hp1 NA19089.hp1	intron_variant	MODIFIER	c.387-300dupC c.387-300dupC	SNX12	ENSG00000147164.12	transcript	ENST00000374274.8	protein_coding	3/3	chrX	71061417
chrX:71061438	A A	G G	1	a0001c0001t0001g0105 a0001c0001t0001g0105	1	HG02976.hp1 HG02976.hp1	intron_variant	MODIFIER	c.387-320T>C c.387-320T>C	SNX12	ENSG00000147164.12	transcript	ENST00000374274.8	protein_coding	3/3	chrX	71061438
chrX:71061471	G G	A A	1	a0001c0001t0001g0075 a0001c0001t0001g0075	1	HG02148.hp1 HG02148.hp1	intron_variant	MODIFIER	c.387-353C>T c.387-353C>T	SNX12	ENSG00000147164.12	transcript	ENST00000374274.8	protein_coding	3/3	chrX	71061471
chrX:71061550	T T	C C	1	a0001c0002t0003g0043 a0001c0002t0003g0043	1	HG01081.hp2 HG01081.hp2	intron_variant	MODIFIER	c.386+293A>G c.386+293A>G	SNX12	ENSG00000147164.12	transcript	ENST00000374274.8	protein_coding	3/3	chrX	71061550
chrX:71061665	G G	A A	1	a0001c0001t0001g0031 a0001c0001t0001g0031	1	HG02155.hp2 HG02155.hp2	intron_variant	MODIFIER	c.386+178C>T c.386+178C>T	SNX12	ENSG00000147164.12	transcript	ENST00000374274.8	protein_coding	3/3	chrX	71061665
chrX:71061711	T T	G G	1	a0001c0001t0002g0068 a0001c0001t0002g0068	1	HG04184.hp1 HG04184.hp1	intron_variant	MODIFIER	c.386+132A>C c.386+132A>C	SNX12	ENSG00000147164.12	transcript	ENST00000374274.8	protein_coding	3/3	chrX	71061711
chrX:71061814	C C	T T	1	a0001c0001t0010g0083 a0001c0001t0010g0083	1	HG01884.hp1 HG01884.hp1	intron_variant	MODIFIER	c.386+29G>A c.386+29G>A	SNX12	ENSG00000147164.12	transcript	ENST00000374274.8	protein_coding	3/3	chrX	71061814
chrX:71062035	C C	T T	1	a0001c0001t0002g0065 a0001c0001t0002g0065	1	NA18983.hp1 NA18983.hp1	intron_variant	MODIFIER	c.262-68G>A c.262-68G>A	SNX12	ENSG00000147164.12	transcript	ENST00000374274.8	protein_coding	2/3	chrX	71062035
chrX:71062130	G G	C C	1	a0001c0001t0001g0029 a0001c0001t0001g0029	2	NA18968.hp1 NA19088.hp1 NA18968.hp1 NA19088.hp1	intron_variant	MODIFIER	c.262-163C>G c.262-163C>G	SNX12	ENSG00000147164.12	transcript	ENST00000374274.8	protein_coding	2/3	chrX	71062130
chrX:71062146	GT GT	G G	1	a0001c0001t0001g0091 a0001c0001t0001g0091	1	NA18988.hp1 NA18988.hp1	intron_variant	MODIFIER	c.262-180delA c.262-180delA	SNX12	ENSG00000147164.12	transcript	ENST00000374274.8	protein_coding	2/3	chrX	71062146
chrX:71062169	CCA CCA	C C	1	a0001c0001t0010g0083 a0001c0001t0010g0083	1	HG01884.hp1 HG01884.hp1	intron_variant	MODIFIER	c.262-204_262-203del others(2): Show c.262-204_262-203delTG	SNX12	ENSG00000147164.12	transcript	ENST00000374274.8	protein_coding	2/3	chrX	71062169
chrX:71062368	C C	CT CT	27	a0001c0001t0001g0003 a0001c0001t0001g0005 a0001c0001t0001g0006 others(24): Show a0001c0001t0001g0003 a0001c0001t0001g0005 a0001c0001t0001g0006 a0001c0001t0001g0014 a0001c0001t0001g0019 a0001c0001t0001g0020 a0001c0001t0001g0029 a0001c0001t0001g0031 a0001c0001t0001g0054 a0001c0001t0001g0059 a0001c0001t0001g0087 a0001c0001t0001g0088 a0001c0001t0001g0092 a0001c0001t0001g0093 a0001c0001t0001g0097 a0001c0001t0001g0098 a0001c0001t0001g0099 a0001c0001t0001g0101 a0001c0001t0001g0104 a0001c0001t0001g0105 a0001c0001t0002g0018 a0001c0001t0002g0025 a0001c0001t0010g0083 a0001c0001t0014g0094 a0001c0002t0003g0017 a0001c0002t0003g0045 a0001c0002t0003g0047	78	HG00099.hp2 HG00323.hp2 HG00544.hp1 others(75): Show HG00099.hp2 HG00323.hp2 HG00544.hp1 HG00735.hp1 HG00741.hp1 HG01175.hp1 HG01255.hp1 HG01433.hp1 HG01884.hp1 HG01891.hp2 HG02055.hp1 HG02056.hp1 HG02071.hp1 HG02109.hp1 HG02109.hp2 HG02148.hp2 HG02155.hp2 HG02165.hp2 HG02280.hp2 HG02486.hp1 HG02523.hp1 HG02559.hp1 HG02559.hp2 HG02622.hp1 HG02622.hp2 HG02647.hp1 HG02698.hp1 HG02809.hp1 HG02886.hp2 HG02895.hp1 HG02897.hp2 HG02922.hp1 HG02965.hp1 HG02970.hp1 HG02976.hp1 HG03017.hp1 HG03041.hp2 HG03098.hp1 HG03130.hp1 HG03139.hp1 HG03195.hp1 HG03195.hp2 HG03225.hp1 HG03239.hp2 HG03471.hp1 HG03486.hp1 HG03540.hp1 HG03654.hp1 HG03710.hp1 HG03831.hp1 HG03834.hp2 HG03942.hp1 HG04184.hp2 HG06807.hp2 NA18941.hp2 NA18947.hp2 NA18951.hp2 NA18957.hp1 NA18968.hp1 NA18977.hp1 NA18980.hp2 NA18981.hp2 NA18993.hp1 NA18999.hp2 NA19030.hp1 NA19030.hp2 NA19043.hp1 NA19075.hp1 NA19078.hp1 NA19083.hp1 NA19088.hp1 NA19090.hp1 NA19240.hp1 NA20129.hp2 NA20300.hp2 NA20752.hp1 NA21309.hp2 homoSapiens_chm13v2.hp1	intron_variant	MODIFIER	c.262-402dupA c.262-402dupA	SNX12	ENSG00000147164.12	transcript	ENST00000374274.8	protein_coding	2/3	chrX	71062368
chrX:71062368	C C	CTT CTT	9	a0001c0001t0001g0028 a0001c0001t0001g0103 a0001c0001t0011g0096 others(6): Show a0001c0001t0001g0028 a0001c0001t0001g0103 a0001c0001t0011g0096 a0001c0002t0003g0010 a0001c0002t0003g0044 a0001c0002t0003g0046 a0001c0002t0003g0048 a0001c0002t0003g0084 a0001c0002t0007g0042	15	HG00423.hp2 HG02970.hp2 HG03516.hp2 others(12): Show HG00423.hp2 HG02970.hp2 HG03516.hp2 HG03834.hp1 NA18952.hp1 NA18980.hp1 NA18999.hp1 NA19009.hp1 NA19012.hp1 NA19058.hp1 NA19066.hp1 NA19079.hp1 NA19081.hp2 NA19087.hp2 NA19089.hp1	intron_variant	MODIFIER	c.262-403_262-402dup others(2): Show c.262-403_262-402dupAA	SNX12	ENSG00000147164.12	transcript	ENST00000374274.8	protein_coding	2/3	chrX	71062368
chrX:71062368	CT CT	C C	9	a0001c0001t0001g0030 a0001c0001t0001g0035 a0001c0001t0001g0076 others(6): Show a0001c0001t0001g0030 a0001c0001t0001g0035 a0001c0001t0001g0076 a0001c0001t0002g0052 a0001c0001t0002g0070 a0001c0001t0002g0081 a0001c0001t0004g0038 a0001c0001t0005g0074 a0001c0001t0008g0069	9	HG01168.hp2 HG01257.hp2 HG02258.hp1 others(6): Show HG01168.hp2 HG01257.hp2 HG02258.hp1 HG03041.hp1 HG03490.hp1 HG04199.hp1 NA18961.hp1 NA18968.hp2 NA18994.hp1	intron_variant	MODIFIER	c.262-402delA c.262-402delA	SNX12	ENSG00000147164.12	transcript	ENST00000374274.8	protein_coding	2/3	chrX	71062368
chrX:71062368	CTTT CTTT	C C	1	a0001c0001t0001g0041 a0001c0001t0001g0041	1	HG00738.hp1 HG00738.hp1	intron_variant	MODIFIER	c.262-404_262-402del others(3): Show c.262-404_262-402delAAA	SNX12	ENSG00000147164.12	transcript	ENST00000374274.8	protein_coding	2/3	chrX	71062368
chrX:71062368	CTTTT CTTTT	C C	1	a0001c0001t0001g0040 a0001c0001t0001g0040	1	HG02630.hp2 HG02630.hp2	intron_variant	MODIFIER	c.262-405_262-402del others(4): Show c.262-405_262-402delAAAA	SNX12	ENSG00000147164.12	transcript	ENST00000374274.8	protein_coding	2/3	chrX	71062368
chrX:71062368	CTTTTT CTTTTT	C C	1	a0001c0001t0001g0057 a0001c0001t0001g0057	1	HG02280.hp1 HG02280.hp1	intron_variant	MODIFIER	c.262-406_262-402del others(5): Show c.262-406_262-402delAAAAA	SNX12	ENSG00000147164.12	transcript	ENST00000374274.8	protein_coding	2/3	chrX	71062368
chrX:71062368	CTTTTTT CTTTTTT	C C	1	a0001c0001t0001g0058 a0001c0001t0001g0058	1	HG03486.hp2 HG03486.hp2	intron_variant	MODIFIER	c.262-407_262-402del others(6): Show c.262-407_262-402delAAAAAA	SNX12	ENSG00000147164.12	transcript	ENST00000374274.8	protein_coding	2/3	chrX	71062368
chrX:71062436	G G	A A	1	a0001c0001t0001g0041 a0001c0001t0001g0041	1	HG00738.hp1 HG00738.hp1	intron_variant	MODIFIER	c.261+418C>T c.261+418C>T	SNX12	ENSG00000147164.12	transcript	ENST00000374274.8	protein_coding	2/3	chrX	71062436
chrX:71062494	T T	A A	1	a0001c0001t0001g0077 a0001c0001t0001g0077	1	HG01109.hp1 HG01109.hp1	intron_variant	MODIFIER	c.261+360A>T c.261+360A>T	SNX12	ENSG00000147164.12	transcript	ENST00000374274.8	protein_coding	2/3	chrX	71062494
chrX:71062525	AC AC	A A	10	a0001c0001t0001g0005 a0001c0001t0001g0028 a0001c0001t0001g0029 others(7): Show a0001c0001t0001g0005 a0001c0001t0001g0028 a0001c0001t0001g0029 a0001c0001t0001g0031 a0001c0001t0001g0087 a0001c0001t0001g0088 a0001c0001t0001g0091 a0001c0001t0001g0093 a0001c0001t0001g0098 a0001c0001t0011g0096	21	HG02155.hp2 HG02165.hp2 HG02523.hp1 others(18): Show HG02155.hp2 HG02165.hp2 HG02523.hp1 HG03017.hp1 HG03654.hp1 HG03942.hp1 NA18941.hp2 NA18947.hp2 NA18957.hp1 NA18968.hp1 NA18980.hp2 NA18981.hp2 NA18988.hp1 NA18999.hp2 NA19058.hp1 NA19066.hp1 NA19078.hp1 NA19079.hp1 NA19083.hp1 NA19088.hp1 NA19090.hp1	intron_variant	MODIFIER	c.261+328delG c.261+328delG	SNX12	ENSG00000147164.12	transcript	ENST00000374274.8	protein_coding	2/3	chrX	71062525
chrX:71062620	GC GC	G G	1	a0001c0001t0001g0091 a0001c0001t0001g0091	1	NA18988.hp1 NA18988.hp1	intron_variant	MODIFIER	c.261+233delG c.261+233delG	SNX12	ENSG00000147164.12	transcript	ENST00000374274.8	protein_coding	2/3	chrX	71062620
chrX:71062668	C C	A A	1	a0001c0001t0010g0083 a0001c0001t0010g0083	1	HG01884.hp1 HG01884.hp1	intron_variant	MODIFIER	c.261+186G>T c.261+186G>T	SNX12	ENSG00000147164.12	transcript	ENST00000374274.8	protein_coding	2/3	chrX	71062668
chrX:71062846	A A	G G	75	a0001c0001t0001g0002 a0001c0001t0001g0003 a0001c0001t0001g0005 others(72): Show a0001c0001t0001g0002 a0001c0001t0001g0003 a0001c0001t0001g0005 a0001c0001t0001g0006 a0001c0001t0001g0007 a0001c0001t0001g0011 a0001c0001t0001g0013 a0001c0001t0001g0014 a0001c0001t0001g0015 a0001c0001t0001g0016 a0001c0001t0001g0019 a0001c0001t0001g0020 a0001c0001t0001g0022 a0001c0001t0001g0024 a0001c0001t0001g0027 a0001c0001t0001g0028 a0001c0001t0001g0029 a0001c0001t0001g0030 a0001c0001t0001g0031 a0001c0001t0001g0033 a0001c0001t0001g0034 a0001c0001t0001g0035 a0001c0001t0001g0036 a0001c0001t0001g0037 a0001c0001t0001g0039 a0001c0001t0001g0040 a0001c0001t0001g0041 a0001c0001t0001g0050 a0001c0001t0001g0051 a0001c0001t0001g0054 a0001c0001t0001g0056 a0001c0001t0001g0057 a0001c0001t0001g0058 a0001c0001t0001g0059 a0001c0001t0001g0061 a0001c0001t0001g0062 a0001c0001t0001g0073 a0001c0001t0001g0075 a0001c0001t0001g0076 a0001c0001t0001g0077 a0001c0001t0001g0080 a0001c0001t0001g0087 a0001c0001t0001g0088 a0001c0001t0001g0091 a0001c0001t0001g0092 a0001c0001t0001g0093 a0001c0001t0001g0095 a0001c0001t0001g0097 a0001c0001t0001g0098 a0001c0001t0001g0099 a0001c0001t0001g0101 a0001c0001t0001g0102 a0001c0001t0001g0103 a0001c0001t0001g0104 a0001c0001t0001g0105 a0001c0001t0004g0012 a0001c0001t0004g0038 a0001c0001t0005g0023 a0001c0001t0005g0074 a0001c0001t0006g0055 a0001c0001t0006g0071 a0001c0001t0009g0053 a0001c0001t0010g0083 a0001c0001t0011g0096 a0001c0001t0014g0094 a0001c0002t0003g0010 a0001c0002t0003g0017 a0001c0002t0003g0043 a0001c0002t0003g0044 a0001c0002t0003g0045 a0001c0002t0003g0046 a0001c0002t0003g0047 a0001c0002t0003g0048 a0001c0002t0003g0084 a0001c0002t0007g0042	182	HG00099.hp1 HG00099.hp2 HG00140.hp1 others(179): Show HG00099.hp1 HG00099.hp2 HG00140.hp1 HG00323.hp2 HG00423.hp2 HG00544.hp1 HG00639.hp2 HG00642.hp1 HG00673.hp1 HG00733.hp2 HG00735.hp1 HG00738.hp1 HG00741.hp1 HG01069.hp1 HG01070.hp1 HG01071.hp2 HG01081.hp1 HG01081.hp2 HG01099.hp1 HG01106.hp1 HG01109.hp1 HG01123.hp1 HG01123.hp2 HG01167.hp1 HG01168.hp1 HG01168.hp2 HG01169.hp1 HG01169.hp2 HG01175.hp1 HG01175.hp2 HG01192.hp1 HG01256.hp1 HG01257.hp2 HG01258.hp1 HG01361.hp2 HG01433.hp1 HG01496.hp1 HG01884.hp1 HG01884.hp2 HG01891.hp1 HG01891.hp2 HG01934.hp1 HG01943.hp1 HG01952.hp1 HG01975.hp1 HG01978.hp2 HG01981.hp1 HG01981.hp2 HG01993.hp1 HG02015.hp1 HG02055.hp1 HG02056.hp1 HG02074.hp1 HG02080.hp2 HG02109.hp1 HG02109.hp2 HG02145.hp1 HG02148.hp1 HG02148.hp2 HG02155.hp1 HG02155.hp2 HG02165.hp1 HG02165.hp2 HG02258.hp1 HG02273.hp1 HG02273.hp2 HG02280.hp1 HG02280.hp2 HG02293.hp1 HG02451.hp1 HG02486.hp1 HG02523.hp1 HG02559.hp1 HG02559.hp2 HG02572.hp1 HG02622.hp1 HG02622.hp2 HG02630.hp1 HG02630.hp2 HG02647.hp1 HG02683.hp1 HG02683.hp2 HG02698.hp1 HG02809.hp1 HG02809.hp2 HG02886.hp1 HG02886.hp2 HG02895.hp1 HG02896.hp1 HG02896.hp2 HG02897.hp1 HG02897.hp2 HG02922.hp1 HG02965.hp1 HG02970.hp1 HG02970.hp2 HG02976.hp1 HG03017.hp1 HG03041.hp1 HG03041.hp2 HG03130.hp1 HG03139.hp1 HG03195.hp1 HG03195.hp2 HG03209.hp1 HG03225.hp1 HG03239.hp2 HG03453.hp1 HG03453.hp2 HG03471.hp1 HG03486.hp1 HG03486.hp2 HG03490.hp1 HG03516.hp1 HG03516.hp2 HG03540.hp1 HG03540.hp2 HG03579.hp1 HG03654.hp1 HG03669.hp2 HG03710.hp1 HG03831.hp1 HG03834.hp1 HG03834.hp2 HG03942.hp1 HG04115.hp1 HG04184.hp2 HG06807.hp1 HG06807.hp2 NA18522.hp1 NA18906.hp1 NA18939.hp1 NA18941.hp2 NA18942.hp1 NA18945.hp1 NA18947.hp2 NA18950.hp1 NA18951.hp2 NA18952.hp1 NA18953.hp1 NA18957.hp1 NA18957.hp2 NA18965.hp1 NA18968.hp1 NA18974.hp1 NA18980.hp1 NA18980.hp2 NA18981.hp2 NA18988.hp1 NA18991.hp1 NA18993.hp1 NA18999.hp1 NA18999.hp2 NA19005.hp1 NA19007.hp1 NA19009.hp1 NA19012.hp1 NA19030.hp1 NA19030.hp2 NA19043.hp1 NA19054.hp1 NA19056.hp1 NA19058.hp1 NA19064.hp2 NA19066.hp1 NA19076.hp1 NA19078.hp1 NA19079.hp1 NA19081.hp2 NA19083.hp1 NA19087.hp2 NA19088.hp1 NA19089.hp1 NA19090.hp1 NA19240.hp1 NA20129.hp2 NA20300.hp2 NA20752.hp1 NA20805.hp1 NA21309.hp1 NA21309.hp2 homoSapiens_chm13v2.hp1	splice_region_variant&intron_variant	LOW	c.261+8T>C c.261+8T>C	SNX12	ENSG00000147164.12	transcript	ENST00000374274.8	protein_coding	2/3	chrX	71062846
chrX:71063117	AC AC	A A	1	a0001c0002t0003g0084 a0001c0002t0003g0084	1	NA19081.hp2 NA19081.hp2	intron_variant	MODIFIER	c.166-169delG c.166-169delG	SNX12	ENSG00000147164.12	transcript	ENST00000374274.8	protein_coding	1/3	chrX	71063117
chrX:71063150	C C	T T	1	a0001c0001t0002g0064 a0001c0001t0002g0064	1	HG00741.hp2 HG00741.hp2	intron_variant	MODIFIER	c.166-201G>A c.166-201G>A	SNX12	ENSG00000147164.12	transcript	ENST00000374274.8	protein_coding	1/3	chrX	71063150
chrX:71063227	TG TG	T T	1	a0001c0002t0003g0084 a0001c0002t0003g0084	1	NA19081.hp2 NA19081.hp2	intron_variant	MODIFIER	c.166-279delC c.166-279delC	SNX12	ENSG00000147164.12	transcript	ENST00000374274.8	protein_coding	1/3	chrX	71063227
chrX:71063363	G G	A A	2	a0001c0001t0006g0055 a0001c0001t0006g0071 a0001c0001t0006g0055 a0001c0001t0006g0071	2	HG01167.hp1 HG01169.hp2 HG01167.hp1 HG01169.hp2	intron_variant	MODIFIER	c.166-414C>T c.166-414C>T	SNX12	ENSG00000147164.12	transcript	ENST00000374274.8	protein_coding	1/3	chrX	71063363
chrX:71063428	C C	CG CG	1	a0001c0002t0003g0084 a0001c0002t0003g0084	1	NA19081.hp2 NA19081.hp2	intron_variant	MODIFIER	c.166-480dupC c.166-480dupC	SNX12	ENSG00000147164.12	transcript	ENST00000374274.8	protein_coding	1/3	chrX	71063428
chrX:71063496	C C	CA CA	2	a0001c0001t0002g0049 a0001c0002t0003g0084 a0001c0001t0002g0049 a0001c0002t0003g0084	2	NA19078.hp2 NA19081.hp2 NA19078.hp2 NA19081.hp2	intron_variant	MODIFIER	c.166-548dupT c.166-548dupT	SNX12	ENSG00000147164.12	transcript	ENST00000374274.8	protein_coding	1/3	chrX	71063496
chrX:71063509	AAG AAG	A A	1	a0001c0001t0001g0097 a0001c0001t0001g0097	1	HG01433.hp1 HG01433.hp1	intron_variant	MODIFIER	c.166-562_166-561del others(2): Show c.166-562_166-561delCT	SNX12	ENSG00000147164.12	transcript	ENST00000374274.8	protein_coding	1/3	chrX	71063509
chrX:71063547	A A	AG AG	1	a0001c0002t0003g0084 a0001c0002t0003g0084	1	NA19081.hp2 NA19081.hp2	intron_variant	MODIFIER	c.166-599_166-598ins others(1): Show c.166-599_166-598insC	SNX12	ENSG00000147164.12	transcript	ENST00000374274.8	protein_coding	1/3	chrX	71063547
chrX:71063668	C C	CT CT	1	a0001c0002t0003g0084 a0001c0002t0003g0084	1	NA19081.hp2 NA19081.hp2	intron_variant	MODIFIER	c.166-720dupA c.166-720dupA	SNX12	ENSG00000147164.12	transcript	ENST00000374274.8	protein_coding	1/3	chrX	71063668
chrX:71063869	TG TG	T T	1	a0001c0002t0003g0084 a0001c0002t0003g0084	1	NA19081.hp2 NA19081.hp2	intron_variant	MODIFIER	c.166-921delC c.166-921delC	SNX12	ENSG00000147164.12	transcript	ENST00000374274.8	protein_coding	1/3	chrX	71063869
chrX:71063891	G G	A A	13	a0001c0001t0001g0002 a0001c0001t0001g0013 a0001c0001t0001g0014 others(10): Show a0001c0001t0001g0002 a0001c0001t0001g0013 a0001c0001t0001g0014 a0001c0001t0001g0027 a0001c0001t0001g0030 a0001c0001t0001g0051 a0001c0001t0001g0054 a0001c0001t0001g0062 a0001c0001t0001g0073 a0001c0001t0001g0075 a0001c0001t0001g0076 a0001c0001t0001g0077 a0001c0001t0001g0080	49	HG00544.hp1 HG00639.hp2 HG00673.hp1 others(46): Show HG00544.hp1 HG00639.hp2 HG00673.hp1 HG01109.hp1 HG01123.hp2 HG01168.hp1 HG01169.hp1 HG01256.hp1 HG01257.hp2 HG01258.hp1 HG01361.hp2 HG01496.hp1 HG01934.hp1 HG01943.hp1 HG01952.hp1 HG01975.hp1 HG01978.hp2 HG01981.hp1 HG01981.hp2 HG01993.hp1 HG02056.hp1 HG02080.hp2 HG02148.hp1 HG02148.hp2 HG02155.hp1 HG02165.hp1 HG02273.hp1 HG02273.hp2 HG02293.hp1 HG02683.hp2 HG03490.hp1 HG04115.hp1 NA18939.hp1 NA18942.hp1 NA18945.hp1 NA18950.hp1 NA18951.hp2 NA18953.hp1 NA18957.hp2 NA18965.hp1 NA18974.hp1 NA18991.hp1 NA18993.hp1 NA19005.hp1 NA19007.hp1 NA19054.hp1 NA19056.hp1 NA19064.hp2 NA19076.hp1	intron_variant	MODIFIER	c.166-942C>T c.166-942C>T	SNX12	ENSG00000147164.12	transcript	ENST00000374274.8	protein_coding	1/3	chrX	71063891
chrX:71063942	T T	TA TA	1	a0001c0002t0003g0084 a0001c0002t0003g0084	1	NA19081.hp2 NA19081.hp2	intron_variant	MODIFIER	c.166-994dupT c.166-994dupT	SNX12	ENSG00000147164.12	transcript	ENST00000374274.8	protein_coding	1/3	chrX	71063942
chrX:71063991	GT GT	G G	1	a0001c0002t0003g0084 a0001c0002t0003g0084	1	NA19081.hp2 NA19081.hp2	intron_variant	MODIFIER	c.166-1043delA c.166-1043delA	SNX12	ENSG00000147164.12	transcript	ENST00000374274.8	protein_coding	1/3	chrX	71063991
chrX:71064168	TA TA	T T	1	a0001c0001t0001g0073 a0001c0001t0001g0073	1	NA18965.hp1 NA18965.hp1	intron_variant	MODIFIER	c.166-1220delT c.166-1220delT	SNX12	ENSG00000147164.12	transcript	ENST00000374274.8	protein_coding	1/3	chrX	71064168
chrX:71064181	T T	C C	1	a0001c0001t0002g0072 a0001c0001t0002g0072	1	NA19072.hp1 NA19072.hp1	intron_variant	MODIFIER	c.166-1232A>G c.166-1232A>G	SNX12	ENSG00000147164.12	transcript	ENST00000374274.8	protein_coding	1/3	chrX	71064181
chrX:71064282	CA CA	C C	1	a0001c0002t0003g0084 a0001c0002t0003g0084	1	NA19081.hp2 NA19081.hp2	intron_variant	MODIFIER	c.166-1334delT c.166-1334delT	SNX12	ENSG00000147164.12	transcript	ENST00000374274.8	protein_coding	1/3	chrX	71064282
chrX:71064426	TA TA	T T	1	a0001c0002t0003g0084 a0001c0002t0003g0084	1	NA19081.hp2 NA19081.hp2	intron_variant	MODIFIER	c.166-1478delT c.166-1478delT	SNX12	ENSG00000147164.12	transcript	ENST00000374274.8	protein_coding	1/3	chrX	71064426
chrX:71064447	CT CT	C C	1	a0001c0002t0003g0084 a0001c0002t0003g0084	1	NA19081.hp2 NA19081.hp2	intron_variant	MODIFIER	c.166-1499delA c.166-1499delA	SNX12	ENSG00000147164.12	transcript	ENST00000374274.8	protein_coding	1/3	chrX	71064447
chrX:71064460	TA TA	T T	1	a0001c0002t0003g0084 a0001c0002t0003g0084	1	NA19081.hp2 NA19081.hp2	intron_variant	MODIFIER	c.166-1512delT c.166-1512delT	SNX12	ENSG00000147164.12	transcript	ENST00000374274.8	protein_coding	1/3	chrX	71064460
chrX:71064502	A A	C C	1	a0001c0001t0002g0060 a0001c0001t0002g0060	1	NA18906.hp2 NA18906.hp2	intron_variant	MODIFIER	c.166-1553T>G c.166-1553T>G	SNX12	ENSG00000147164.12	transcript	ENST00000374274.8	protein_coding	1/3	chrX	71064502
chrX:71064669	TC TC	T T	1	a0001c0002t0003g0084 a0001c0002t0003g0084	1	NA19081.hp2 NA19081.hp2	intron_variant	MODIFIER	c.166-1721delG c.166-1721delG	SNX12	ENSG00000147164.12	transcript	ENST00000374274.8	protein_coding	1/3	chrX	71064669
chrX:71064672	CCT CCT	C C	1	a0001c0001t0001g0059 a0001c0001t0001g0059	1	HG03130.hp1 HG03130.hp1	intron_variant	MODIFIER	c.166-1725_166-1724d others(4): Show c.166-1725_166-1724delAG	SNX12	ENSG00000147164.12	transcript	ENST00000374274.8	protein_coding	1/3	chrX	71064672
chrX:71064684	C C	T T	1	a0001c0001t0001g0022 a0001c0001t0001g0022	2	HG03453.hp1 HG03540.hp2 HG03453.hp1 HG03540.hp2	intron_variant	MODIFIER	c.166-1735G>A c.166-1735G>A	SNX12	ENSG00000147164.12	transcript	ENST00000374274.8	protein_coding	1/3	chrX	71064684
chrX:71064841	C C	CA CA	1	a0001c0002t0003g0084 a0001c0002t0003g0084	1	NA19081.hp2 NA19081.hp2	intron_variant	MODIFIER	c.166-1893dupT c.166-1893dupT	SNX12	ENSG00000147164.12	transcript	ENST00000374274.8	protein_coding	1/3	chrX	71064841
chrX:71065043	T T	TA TA	1	a0001c0002t0003g0084 a0001c0002t0003g0084	1	NA19081.hp2 NA19081.hp2	intron_variant	MODIFIER	c.166-2095dupT c.166-2095dupT	SNX12	ENSG00000147164.12	transcript	ENST00000374274.8	protein_coding	1/3	chrX	71065043
chrX:71065073	TA TA	T T	1	a0001c0002t0003g0084 a0001c0002t0003g0084	1	NA19081.hp2 NA19081.hp2	intron_variant	MODIFIER	c.166-2125delT c.166-2125delT	SNX12	ENSG00000147164.12	transcript	ENST00000374274.8	protein_coding	1/3	chrX	71065073
chrX:71065108	C C	T T	2	a0001c0001t0001g0105 a0001c0001t0010g0083 a0001c0001t0001g0105 a0001c0001t0010g0083	2	HG01884.hp1 HG02976.hp1 HG01884.hp1 HG02976.hp1	intron_variant	MODIFIER	c.166-2159G>A c.166-2159G>A	SNX12	ENSG00000147164.12	transcript	ENST00000374274.8	protein_coding	1/3	chrX	71065108
chrX:71065117	TC TC	T T	1	a0001c0002t0003g0084 a0001c0002t0003g0084	1	NA19081.hp2 NA19081.hp2	intron_variant	MODIFIER	c.166-2169delG c.166-2169delG	SNX12	ENSG00000147164.12	transcript	ENST00000374274.8	protein_coding	1/3	chrX	71065117
chrX:71065128	TG TG	T T	1	a0001c0001t0002g0085 a0001c0001t0002g0085	1	NA19063.hp1 NA19063.hp1	intron_variant	MODIFIER	c.166-2180delC c.166-2180delC	SNX12	ENSG00000147164.12	transcript	ENST00000374274.8	protein_coding	1/3	chrX	71065128
chrX:71065167	C C	G G	20	a0001c0001t0001g0002 a0001c0001t0001g0013 a0001c0001t0001g0014 others(17): Show a0001c0001t0001g0002 a0001c0001t0001g0013 a0001c0001t0001g0014 a0001c0001t0001g0022 a0001c0001t0001g0024 a0001c0001t0001g0027 a0001c0001t0001g0030 a0001c0001t0001g0050 a0001c0001t0001g0051 a0001c0001t0001g0054 a0001c0001t0001g0061 a0001c0001t0001g0062 a0001c0001t0001g0073 a0001c0001t0001g0075 a0001c0001t0001g0076 a0001c0001t0001g0077 a0001c0001t0001g0080 a0001c0001t0005g0023 a0001c0001t0005g0074 a0001c0001t0009g0053	59	HG00544.hp1 HG00639.hp2 HG00673.hp1 others(56): Show HG00544.hp1 HG00639.hp2 HG00673.hp1 HG01109.hp1 HG01123.hp2 HG01168.hp1 HG01169.hp1 HG01256.hp1 HG01257.hp2 HG01258.hp1 HG01361.hp2 HG01496.hp1 HG01884.hp2 HG01934.hp1 HG01943.hp1 HG01952.hp1 HG01975.hp1 HG01978.hp2 HG01981.hp1 HG01981.hp2 HG01993.hp1 HG02015.hp1 HG02056.hp1 HG02080.hp2 HG02145.hp1 HG02148.hp1 HG02148.hp2 HG02155.hp1 HG02165.hp1 HG02273.hp1 HG02273.hp2 HG02293.hp1 HG02683.hp2 HG02809.hp2 HG03041.hp1 HG03453.hp1 HG03453.hp2 HG03490.hp1 HG03516.hp1 HG03540.hp2 HG04115.hp1 HG06807.hp1 NA18939.hp1 NA18942.hp1 NA18945.hp1 NA18950.hp1 NA18951.hp2 NA18953.hp1 NA18957.hp2 NA18965.hp1 NA18974.hp1 NA18991.hp1 NA18993.hp1 NA19005.hp1 NA19007.hp1 NA19054.hp1 NA19056.hp1 NA19064.hp2 NA19076.hp1	intron_variant	MODIFIER	c.166-2218G>C c.166-2218G>C	SNX12	ENSG00000147164.12	transcript	ENST00000374274.8	protein_coding	1/3	chrX	71065167
chrX:71065357	C C	CA CA	47	a0001c0001t0001g0002 a0001c0001t0001g0006 a0001c0001t0001g0007 others(44): Show a0001c0001t0001g0002 a0001c0001t0001g0006 a0001c0001t0001g0007 a0001c0001t0001g0011 a0001c0001t0001g0013 a0001c0001t0001g0014 a0001c0001t0001g0015 a0001c0001t0001g0016 a0001c0001t0001g0022 a0001c0001t0001g0024 a0001c0001t0001g0027 a0001c0001t0001g0030 a0001c0001t0001g0033 a0001c0001t0001g0036 a0001c0001t0001g0041 a0001c0001t0001g0050 a0001c0001t0001g0054 a0001c0001t0001g0056 a0001c0001t0001g0057 a0001c0001t0001g0058 a0001c0001t0001g0059 a0001c0001t0001g0061 a0001c0001t0001g0062 a0001c0001t0001g0073 a0001c0001t0001g0075 a0001c0001t0001g0076 a0001c0001t0001g0077 a0001c0001t0001g0078 a0001c0001t0001g0080 a0001c0001t0001g0105 a0001c0001t0002g0008 a0001c0001t0002g0025 a0001c0001t0002g0060 a0001c0001t0002g0082 a0001c0001t0002g0100 a0001c0001t0005g0023 a0001c0001t0005g0074 a0001c0001t0006g0055 a0001c0001t0009g0053 a0001c0002t0003g0010 a0001c0002t0003g0017 a0001c0002t0003g0043 a0001c0002t0003g0046 a0001c0002t0003g0047 a0001c0002t0003g0048 a0001c0002t0003g0084 a0001c0002t0007g0042	121	HG00140.hp1 HG00423.hp2 HG00544.hp1 others(118): Show HG00140.hp1 HG00423.hp2 HG00544.hp1 HG00639.hp2 HG00673.hp1 HG00735.hp1 HG00738.hp1 HG01069.hp1 HG01070.hp1 HG01071.hp2 HG01081.hp1 HG01081.hp2 HG01099.hp1 HG01106.hp1 HG01109.hp1 HG01123.hp2 HG01168.hp1 HG01169.hp1 HG01169.hp2 HG01175.hp2 HG01192.hp1 HG01255.hp1 HG01256.hp1 HG01257.hp2 HG01258.hp1 HG01261.hp1 HG01361.hp2 HG01496.hp1 HG01884.hp2 HG01891.hp1 HG01928.hp1 HG01934.hp1 HG01943.hp1 HG01952.hp1 HG01975.hp1 HG01978.hp2 HG01981.hp1 HG01981.hp2 HG01993.hp1 HG02015.hp1 HG02055.hp1 HG02056.hp1 HG02074.hp1 HG02080.hp2 HG02145.hp1 HG02148.hp1 HG02148.hp2 HG02155.hp1 HG02165.hp1 HG02273.hp1 HG02273.hp2 HG02280.hp1 HG02280.hp2 HG02293.hp1 HG02451.hp1 HG02559.hp2 HG02572.hp1 HG02622.hp1 HG02630.hp1 HG02683.hp2 HG02717.hp1 HG02738.hp1 HG02809.hp2 HG02886.hp1 HG02886.hp2 HG02896.hp2 HG02897.hp1 HG02970.hp1 HG02976.hp1 HG02976.hp2 HG03041.hp1 HG03098.hp1 HG03130.hp1 HG03195.hp1 HG03195.hp2 HG03209.hp1 HG03453.hp1 HG03453.hp2 HG03486.hp2 HG03490.hp1 HG03516.hp1 HG03516.hp2 HG03540.hp2 HG03579.hp1 HG03831.hp2 HG03834.hp1 HG04115.hp1 HG06807.hp1 NA18906.hp2 NA18939.hp1 NA18942.hp1 NA18945.hp1 NA18950.hp1 NA18951.hp1 NA18951.hp2 NA18952.hp1 NA18953.hp1 NA18957.hp2 NA18965.hp1 NA18974.hp1 NA18980.hp1 NA18991.hp1 NA18993.hp1 NA18999.hp1 NA19005.hp1 NA19007.hp1 NA19009.hp1 NA19030.hp2 NA19054.hp1 NA19056.hp1 NA19064.hp2 NA19081.hp2 NA19086.hp1 NA19087.hp2 NA19089.hp1 NA19240.hp1 NA19240.hp2 NA20129.hp1 NA20129.hp2 NA20805.hp1 NA21309.hp1	intron_variant	MODIFIER	c.166-2409dupT c.166-2409dupT	SNX12	ENSG00000147164.12	transcript	ENST00000374274.8	protein_coding	1/3	chrX	71065357
chrX:71065357	C C	CAA CAA	11	a0001c0001t0001g0028 a0001c0001t0001g0039 a0001c0001t0001g0040 others(8): Show a0001c0001t0001g0028 a0001c0001t0001g0039 a0001c0001t0001g0040 a0001c0001t0001g0087 a0001c0001t0001g0092 a0001c0001t0001g0093 a0001c0001t0002g0079 a0001c0001t0004g0012 a0001c0001t0004g0038 a0001c0002t0003g0044 a0001c0002t0003g0045	15	HG00099.hp1 HG00642.hp1 HG01123.hp1 others(12): Show HG00099.hp1 HG00642.hp1 HG01123.hp1 HG01168.hp2 HG01243.hp1 HG02109.hp2 HG02486.hp1 HG02630.hp2 HG02683.hp1 HG03017.hp1 HG03669.hp2 NA18947.hp2 NA19012.hp1 NA19066.hp1 NA19079.hp1	intron_variant	MODIFIER	c.166-2410_166-2409d others(4): Show c.166-2410_166-2409dupTT	SNX12	ENSG00000147164.12	transcript	ENST00000374274.8	protein_coding	1/3	chrX	71065357
chrX:71065357	C C	CAAA CAAA	16	a0001c0001t0001g0003 a0001c0001t0001g0005 a0001c0001t0001g0019 others(13): Show a0001c0001t0001g0003 a0001c0001t0001g0005 a0001c0001t0001g0019 a0001c0001t0001g0029 a0001c0001t0001g0031 a0001c0001t0001g0088 a0001c0001t0001g0091 a0001c0001t0001g0095 a0001c0001t0001g0097 a0001c0001t0001g0099 a0001c0001t0001g0101 a0001c0001t0001g0102 a0001c0001t0001g0104 a0001c0001t0010g0083 a0001c0001t0011g0096 a0001c0001t0014g0094	50	HG00099.hp2 HG00323.hp2 HG00741.hp1 others(47): Show HG00099.hp2 HG00323.hp2 HG00741.hp1 HG01175.hp1 HG01433.hp1 HG01884.hp1 HG01891.hp2 HG02109.hp1 HG02155.hp2 HG02165.hp2 HG02523.hp1 HG02559.hp1 HG02622.hp2 HG02698.hp1 HG02895.hp1 HG02896.hp1 HG02897.hp2 HG02922.hp1 HG02965.hp1 HG03041.hp2 HG03225.hp1 HG03239.hp2 HG03471.hp1 HG03486.hp1 HG03540.hp1 HG03654.hp1 HG03710.hp1 HG03831.hp1 HG03834.hp2 HG04184.hp2 HG06807.hp2 NA18906.hp1 NA18941.hp2 NA18957.hp1 NA18968.hp1 NA18980.hp2 NA18981.hp2 NA18988.hp1 NA18999.hp2 NA19030.hp1 NA19043.hp1 NA19058.hp1 NA19078.hp1 NA19083.hp1 NA19088.hp1 NA19090.hp1 NA20300.hp2 NA20752.hp1 NA21309.hp2 homoSapiens_chm13v2.hp1	intron_variant	MODIFIER	c.166-2411_166-2409d others(5): Show c.166-2411_166-2409dupTTT	SNX12	ENSG00000147164.12	transcript	ENST00000374274.8	protein_coding	1/3	chrX	71065357
chrX:71065357	C C	CAAAA CAAAA	2	a0001c0001t0001g0020 a0001c0001t0001g0103 a0001c0001t0001g0020 a0001c0001t0001g0103	4	HG02647.hp1 HG02809.hp1 HG02970.hp2 others(1): Show HG02647.hp1 HG02809.hp1 HG02970.hp2 HG03139.hp1	intron_variant	MODIFIER	c.166-2412_166-2409d others(6): Show c.166-2412_166-2409dupTTTT	SNX12	ENSG00000147164.12	transcript	ENST00000374274.8	protein_coding	1/3	chrX	71065357
chrX:71065357	C C	CAAAAA CAAAAA	1	a0001c0001t0001g0098 a0001c0001t0001g0098	1	HG03942.hp1 HG03942.hp1	intron_variant	MODIFIER	c.166-2413_166-2409d others(7): Show c.166-2413_166-2409dupTTTTT	SNX12	ENSG00000147164.12	transcript	ENST00000374274.8	protein_coding	1/3	chrX	71065357
chrX:71065357	CA CA	C C	1	a0001c0001t0002g0021 a0001c0001t0002g0021	2	HG01993.hp2 NA18940.hp1 HG01993.hp2 NA18940.hp1	intron_variant	MODIFIER	c.166-2409delT c.166-2409delT	SNX12	ENSG00000147164.12	transcript	ENST00000374274.8	protein_coding	1/3	chrX	71065357
chrX:71065435	G G	A A	1	a0001c0001t0001g0080 a0001c0001t0001g0080	1	HG02683.hp2 HG02683.hp2	intron_variant	MODIFIER	c.166-2486C>T c.166-2486C>T	SNX12	ENSG00000147164.12	transcript	ENST00000374274.8	protein_coding	1/3	chrX	71065435
chrX:71065548	T T	C C	1	a0001c0001t0010g0083 a0001c0001t0010g0083	1	HG01884.hp1 HG01884.hp1	intron_variant	MODIFIER	c.165+2594A>G c.165+2594A>G	SNX12	ENSG00000147164.12	transcript	ENST00000374274.8	protein_coding	1/3	chrX	71065548
chrX:71065603	G G	A A	1	a0001c0001t0010g0083 a0001c0001t0010g0083	1	HG01884.hp1 HG01884.hp1	intron_variant	MODIFIER	c.165+2539C>T c.165+2539C>T	SNX12	ENSG00000147164.12	transcript	ENST00000374274.8	protein_coding	1/3	chrX	71065603
chrX:71065625	C C	T T	1	a0001c0001t0002g0063 a0001c0001t0002g0063	1	HG00558.hp1 HG00558.hp1	intron_variant	MODIFIER	c.165+2517G>A c.165+2517G>A	SNX12	ENSG00000147164.12	transcript	ENST00000374274.8	protein_coding	1/3	chrX	71065625
chrX:71065628	A A	T T	1	a0001c0001t0001g0062 a0001c0001t0001g0062	1	HG01978.hp2 HG01978.hp2	intron_variant	MODIFIER	c.165+2514T>A c.165+2514T>A	SNX12	ENSG00000147164.12	transcript	ENST00000374274.8	protein_coding	1/3	chrX	71065628
chrX:71065664	C C	T T	1	a0001c0001t0001g0061 a0001c0001t0001g0061	1	HG06807.hp1 HG06807.hp1	intron_variant	MODIFIER	c.165+2478G>A c.165+2478G>A	SNX12	ENSG00000147164.12	transcript	ENST00000374274.8	protein_coding	1/3	chrX	71065664
chrX:71065804	C C	CA CA	11	a0001c0001t0001g0006 a0001c0001t0001g0007 a0001c0001t0001g0036 others(8): Show a0001c0001t0001g0006 a0001c0001t0001g0007 a0001c0001t0001g0036 a0001c0001t0001g0039 a0001c0001t0001g0056 a0001c0001t0001g0057 a0001c0001t0001g0058 a0001c0001t0001g0059 a0001c0001t0002g0049 a0001c0002t0003g0046 a0001c0002t0003g0047	24	HG00140.hp1 HG01070.hp1 HG01081.hp1 others(21): Show HG00140.hp1 HG01070.hp1 HG01081.hp1 HG01099.hp1 HG01106.hp1 HG01175.hp2 HG01192.hp1 HG02055.hp1 HG02280.hp1 HG02280.hp2 HG02451.hp1 HG02559.hp2 HG02622.hp1 HG02683.hp1 HG02886.hp2 HG03130.hp1 HG03195.hp2 HG03486.hp2 HG03516.hp2 NA19030.hp2 NA19078.hp2 NA19240.hp1 NA20129.hp2 NA20805.hp1	intron_variant	MODIFIER	c.165+2337dupT c.165+2337dupT	SNX12	ENSG00000147164.12	transcript	ENST00000374274.8	protein_coding	1/3	chrX	71065804
chrX:71065804	CA CA	C C	3	a0001c0001t0001g0091 a0001c0001t0002g0060 a0001c0002t0003g0084 a0001c0001t0001g0091 a0001c0001t0002g0060 a0001c0002t0003g0084	3	NA18906.hp2 NA18988.hp1 NA19081.hp2 NA18906.hp2 NA18988.hp1 NA19081.hp2	intron_variant	MODIFIER	c.165+2337delT c.165+2337delT	SNX12	ENSG00000147164.12	transcript	ENST00000374274.8	protein_coding	1/3	chrX	71065804
chrX:71065832	G G	GT GT	1	a0001c0002t0003g0084 a0001c0002t0003g0084	1	NA19081.hp2 NA19081.hp2	intron_variant	MODIFIER	c.165+2309dupA c.165+2309dupA	SNX12	ENSG00000147164.12	transcript	ENST00000374274.8	protein_coding	1/3	chrX	71065832
chrX:71065860	T T	TC TC	1	a0001c0001t0002g0049 a0001c0001t0002g0049	1	NA19078.hp2 NA19078.hp2	intron_variant	MODIFIER	c.165+2281dupG c.165+2281dupG	SNX12	ENSG00000147164.12	transcript	ENST00000374274.8	protein_coding	1/3	chrX	71065860
chrX:71065979	G G	GA GA	21	a0001c0001t0001g0003 a0001c0001t0001g0005 a0001c0001t0001g0019 others(18): Show a0001c0001t0001g0003 a0001c0001t0001g0005 a0001c0001t0001g0019 a0001c0001t0001g0020 a0001c0001t0001g0028 a0001c0001t0001g0029 a0001c0001t0001g0031 a0001c0001t0001g0087 a0001c0001t0001g0088 a0001c0001t0001g0091 a0001c0001t0001g0092 a0001c0001t0001g0093 a0001c0001t0001g0095 a0001c0001t0001g0097 a0001c0001t0001g0098 a0001c0001t0001g0101 a0001c0001t0001g0102 a0001c0001t0001g0103 a0001c0001t0001g0104 a0001c0001t0011g0096 a0001c0001t0014g0094	58	HG00099.hp2 HG00323.hp2 HG00741.hp1 others(55): Show HG00099.hp2 HG00323.hp2 HG00741.hp1 HG01175.hp1 HG01433.hp1 HG01891.hp2 HG02109.hp1 HG02155.hp2 HG02165.hp2 HG02486.hp1 HG02523.hp1 HG02559.hp1 HG02622.hp2 HG02647.hp1 HG02698.hp1 HG02809.hp1 HG02895.hp1 HG02896.hp1 HG02897.hp2 HG02922.hp1 HG02965.hp1 HG02970.hp2 HG03017.hp1 HG03041.hp2 HG03139.hp1 HG03225.hp1 HG03239.hp2 HG03471.hp1 HG03486.hp1 HG03540.hp1 HG03654.hp1 HG03831.hp1 HG03834.hp2 HG03942.hp1 HG04184.hp2 HG06807.hp2 NA18906.hp1 NA18941.hp2 NA18947.hp2 NA18957.hp1 NA18968.hp1 NA18980.hp2 NA18981.hp2 NA18988.hp1 NA18999.hp2 NA19030.hp1 NA19043.hp1 NA19058.hp1 NA19066.hp1 NA19078.hp1 NA19079.hp1 NA19083.hp1 NA19088.hp1 NA19090.hp1 NA20300.hp2 NA20752.hp1 NA21309.hp2 homoSapiens_chm13v2.hp1	intron_variant	MODIFIER	c.165+2162dupT c.165+2162dupT	SNX12	ENSG00000147164.12	transcript	ENST00000374274.8	protein_coding	1/3	chrX	71065979
chrX:71065979	G G	GAA GAA	1	a0001c0001t0001g0099 a0001c0001t0001g0099	1	HG03710.hp1 HG03710.hp1	intron_variant	MODIFIER	c.165+2161_165+2162d others(4): Show c.165+2161_165+2162dupTT	SNX12	ENSG00000147164.12	transcript	ENST00000374274.8	protein_coding	1/3	chrX	71065979
chrX:71066062	G G	C C	1	a0001c0001t0001g0104 a0001c0001t0001g0104	1	NA21309.hp2 NA21309.hp2	intron_variant	MODIFIER	c.165+2080C>G c.165+2080C>G	SNX12	ENSG00000147164.12	transcript	ENST00000374274.8	protein_coding	1/3	chrX	71066062
chrX:71066128	GC GC	G G	1	a0001c0002t0003g0084 a0001c0002t0003g0084	1	NA19081.hp2 NA19081.hp2	intron_variant	MODIFIER	c.165+2013delG c.165+2013delG	SNX12	ENSG00000147164.12	transcript	ENST00000374274.8	protein_coding	1/3	chrX	71066128
chrX:71066152	ACTTGGGC others(14): Show ACTTGGGCAAGTTACTTAAACT	A A	1	a0001c0002t0003g0084 a0001c0002t0003g0084	1	NA19081.hp2 NA19081.hp2	intron_variant	MODIFIER	c.165+1969_165+1989d others(23): Show c.165+1969_165+1989delAGTTTAAGTAACTTGCCCAAG	SNX12	ENSG00000147164.12	transcript	ENST00000374274.8	protein_coding	1/3	chrX	71066152
chrX:71066163	T T	C C	22	a0001c0001t0001g0003 a0001c0001t0001g0005 a0001c0001t0001g0019 others(19): Show a0001c0001t0001g0003 a0001c0001t0001g0005 a0001c0001t0001g0019 a0001c0001t0001g0020 a0001c0001t0001g0028 a0001c0001t0001g0029 a0001c0001t0001g0031 a0001c0001t0001g0087 a0001c0001t0001g0088 a0001c0001t0001g0091 a0001c0001t0001g0092 a0001c0001t0001g0093 a0001c0001t0001g0095 a0001c0001t0001g0097 a0001c0001t0001g0098 a0001c0001t0001g0099 a0001c0001t0001g0101 a0001c0001t0001g0102 a0001c0001t0001g0103 a0001c0001t0001g0104 a0001c0001t0011g0096 a0001c0001t0014g0094	59	HG00099.hp2 HG00323.hp2 HG00741.hp1 others(56): Show HG00099.hp2 HG00323.hp2 HG00741.hp1 HG01175.hp1 HG01433.hp1 HG01891.hp2 HG02109.hp1 HG02155.hp2 HG02165.hp2 HG02486.hp1 HG02523.hp1 HG02559.hp1 HG02622.hp2 HG02647.hp1 HG02698.hp1 HG02809.hp1 HG02895.hp1 HG02896.hp1 HG02897.hp2 HG02922.hp1 HG02965.hp1 HG02970.hp2 HG03017.hp1 HG03041.hp2 HG03139.hp1 HG03225.hp1 HG03239.hp2 HG03471.hp1 HG03486.hp1 HG03540.hp1 HG03654.hp1 HG03710.hp1 HG03831.hp1 HG03834.hp2 HG03942.hp1 HG04184.hp2 HG06807.hp2 NA18906.hp1 NA18941.hp2 NA18947.hp2 NA18957.hp1 NA18968.hp1 NA18980.hp2 NA18981.hp2 NA18988.hp1 NA18999.hp2 NA19030.hp1 NA19043.hp1 NA19058.hp1 NA19066.hp1 NA19078.hp1 NA19079.hp1 NA19083.hp1 NA19088.hp1 NA19090.hp1 NA20300.hp2 NA20752.hp1 NA21309.hp2 homoSapiens_chm13v2.hp1	intron_variant	MODIFIER	c.165+1979A>G c.165+1979A>G	SNX12	ENSG00000147164.12	transcript	ENST00000374274.8	protein_coding	1/3	chrX	71066163
chrX:71066291	T T	C C	3	a0001c0001t0001g0011 a0001c0001t0001g0034 a0001c0001t0001g0035 a0001c0001t0001g0011 a0001c0001t0001g0034 a0001c0001t0001g0035	7	HG01891.hp1 HG02258.hp1 HG02572.hp1 others(4): Show HG01891.hp1 HG02258.hp1 HG02572.hp1 HG02896.hp2 HG02897.hp1 HG03209.hp1 NA18522.hp1	intron_variant	MODIFIER	c.165+1851A>G c.165+1851A>G	SNX12	ENSG00000147164.12	transcript	ENST00000374274.8	protein_coding	1/3	chrX	71066291
chrX:71066336	TC TC	T T	1	a0001c0001t0002g0049 a0001c0001t0002g0049	1	NA19078.hp2 NA19078.hp2	intron_variant	MODIFIER	c.165+1805delG c.165+1805delG	SNX12	ENSG00000147164.12	transcript	ENST00000374274.8	protein_coding	1/3	chrX	71066336
chrX:71066591	T T	TA TA	12	a0001c0001t0001g0016 a0001c0001t0001g0027 a0001c0001t0001g0040 others(9): Show a0001c0001t0001g0016 a0001c0001t0001g0027 a0001c0001t0001g0040 a0001c0001t0001g0101 a0001c0001t0001g0102 a0001c0001t0001g0103 a0001c0001t0001g0104 a0001c0001t0002g0026 a0001c0001t0002g0049 a0001c0001t0002g0081 a0001c0001t0002g0082 a0001c0001t0002g0100	16	HG00673.hp1 HG01261.hp1 HG02630.hp1 others(13): Show HG00673.hp1 HG01261.hp1 HG02630.hp1 HG02630.hp2 HG02738.hp1 HG02896.hp1 HG02970.hp2 HG03239.hp1 HG03579.hp1 HG03831.hp1 NA18943.hp1 NA18968.hp2 NA18991.hp1 NA19078.hp2 NA21309.hp1 NA21309.hp2	intron_variant	MODIFIER	c.165+1550dupT c.165+1550dupT	SNX12	ENSG00000147164.12	transcript	ENST00000374274.8	protein_coding	1/3	chrX	71066591
chrX:71066591	T T	TAA TAA	1	a0001c0001t0002g0032 a0001c0001t0002g0032	1	NA18967.hp1 NA18967.hp1	intron_variant	MODIFIER	c.165+1549_165+1550d others(4): Show c.165+1549_165+1550dupTT	SNX12	ENSG00000147164.12	transcript	ENST00000374274.8	protein_coding	1/3	chrX	71066591
chrX:71066591	T T	TAAA TAAA	1	a0001c0001t0001g0105 a0001c0001t0001g0105	1	HG02976.hp1 HG02976.hp1	intron_variant	MODIFIER	c.165+1548_165+1550d others(5): Show c.165+1548_165+1550dupTTT	SNX12	ENSG00000147164.12	transcript	ENST00000374274.8	protein_coding	1/3	chrX	71066591
chrX:71066591	TA TA	T T	15	a0001c0001t0001g0006 a0001c0001t0001g0013 a0001c0001t0001g0019 others(12): Show a0001c0001t0001g0006 a0001c0001t0001g0013 a0001c0001t0001g0019 a0001c0001t0001g0036 a0001c0001t0001g0054 a0001c0001t0001g0056 a0001c0001t0001g0057 a0001c0001t0001g0058 a0001c0001t0001g0059 a0001c0001t0001g0087 a0001c0001t0001g0088 a0001c0001t0002g0004 a0001c0001t0002g0052 a0001c0001t0006g0055 a0001c0001t0009g0053	36	HG00323.hp2 HG01070.hp1 HG01070.hp2 others(33): Show HG00323.hp2 HG01070.hp1 HG01070.hp2 HG01169.hp1 HG01169.hp2 HG01256.hp1 HG01257.hp1 HG01358.hp1 HG01975.hp2 HG02055.hp1 HG02273.hp1 HG02280.hp1 HG02280.hp2 HG02451.hp1 HG02559.hp2 HG02622.hp1 HG02809.hp2 HG02886.hp2 HG02895.hp1 HG02922.hp2 HG03017.hp1 HG03130.hp1 HG03195.hp2 HG03486.hp2 NA18612.hp1 NA18942.hp2 NA18951.hp2 NA18959.hp1 NA18974.hp1 NA18981.hp1 NA18989.hp1 NA18994.hp1 NA18999.hp2 NA19030.hp2 NA19043.hp1 NA20129.hp2	intron_variant	MODIFIER	c.165+1550delT c.165+1550delT	SNX12	ENSG00000147164.12	transcript	ENST00000374274.8	protein_coding	1/3	chrX	71066591
chrX:71066591	TAA TAA	T T	1	a0001c0001t0001g0051 a0001c0001t0001g0051	1	NA19076.hp1 NA19076.hp1	intron_variant	MODIFIER	c.165+1549_165+1550d others(4): Show c.165+1549_165+1550delTT	SNX12	ENSG00000147164.12	transcript	ENST00000374274.8	protein_coding	1/3	chrX	71066591
chrX:71066633	C C	T T	1	a0001c0001t0001g0050 a0001c0001t0001g0050	1	HG03516.hp1 HG03516.hp1	intron_variant	MODIFIER	c.165+1509G>A c.165+1509G>A	SNX12	ENSG00000147164.12	transcript	ENST00000374274.8	protein_coding	1/3	chrX	71066633
chrX:71066895	T T	C C	1	a0001c0001t0010g0083 a0001c0001t0010g0083	1	HG01884.hp1 HG01884.hp1	intron_variant	MODIFIER	c.165+1247A>G c.165+1247A>G	SNX12	ENSG00000147164.12	transcript	ENST00000374274.8	protein_coding	1/3	chrX	71066895
chrX:71066926	T T	C C	8	a0001c0001t0001g0007 a0001c0001t0001g0015 a0001c0001t0001g0016 others(5): Show a0001c0001t0001g0007 a0001c0001t0001g0015 a0001c0001t0001g0016 a0001c0001t0001g0036 a0001c0001t0001g0037 a0001c0001t0001g0039 a0001c0001t0004g0012 a0001c0001t0004g0038	21	HG00099.hp1 HG00140.hp1 HG00642.hp1 others(18): Show HG00099.hp1 HG00140.hp1 HG00642.hp1 HG00733.hp2 HG01069.hp1 HG01070.hp1 HG01071.hp2 HG01081.hp1 HG01099.hp1 HG01106.hp1 HG01123.hp1 HG01168.hp2 HG01175.hp2 HG01192.hp1 HG02074.hp1 HG02630.hp1 HG02683.hp1 HG03579.hp1 HG03669.hp2 NA20805.hp1 NA21309.hp1	intron_variant	MODIFIER	c.165+1216A>G c.165+1216A>G	SNX12	ENSG00000147164.12	transcript	ENST00000374274.8	protein_coding	1/3	chrX	71066926
chrX:71067005	C C	A A	1	a0001c0002t0003g0048 a0001c0002t0003g0048	1	HG03834.hp1 HG03834.hp1	intron_variant	MODIFIER	c.165+1137G>T c.165+1137G>T	SNX12	ENSG00000147164.12	transcript	ENST00000374274.8	protein_coding	1/3	chrX	71067005
chrX:71067116	TG TG	T T	1	a0001c0001t0002g0049 a0001c0001t0002g0049	1	NA19078.hp2 NA19078.hp2	intron_variant	MODIFIER	c.165+1025delC c.165+1025delC	SNX12	ENSG00000147164.12	transcript	ENST00000374274.8	protein_coding	1/3	chrX	71067116
chrX:71067155	GC GC	G G	1	a0001c0001t0002g0032 a0001c0001t0002g0032	1	NA18967.hp1 NA18967.hp1	intron_variant	MODIFIER	c.165+986delG c.165+986delG	SNX12	ENSG00000147164.12	transcript	ENST00000374274.8	protein_coding	1/3	chrX	71067155
chrX:71067158	A A	C C	1	a0001c0001t0002g0032 a0001c0001t0002g0032	1	NA18967.hp1 NA18967.hp1	intron_variant	MODIFIER	c.165+984T>G c.165+984T>G	SNX12	ENSG00000147164.12	transcript	ENST00000374274.8	protein_coding	1/3	chrX	71067158
chrX:71067161	C C	T T	1	a0001c0001t0002g0032 a0001c0001t0002g0032	1	NA18967.hp1 NA18967.hp1	intron_variant	MODIFIER	c.165+981G>A c.165+981G>A	SNX12	ENSG00000147164.12	transcript	ENST00000374274.8	protein_coding	1/3	chrX	71067161
chrX:71067162	A A	AG AG	1	a0001c0001t0002g0032 a0001c0001t0002g0032	1	NA18967.hp1 NA18967.hp1	intron_variant	MODIFIER	c.165+979_165+980ins others(1): Show c.165+979_165+980insC	SNX12	ENSG00000147164.12	transcript	ENST00000374274.8	protein_coding	1/3	chrX	71067162
chrX:71067164	G G	T T	1	a0001c0001t0002g0032 a0001c0001t0002g0032	1	NA18967.hp1 NA18967.hp1	intron_variant	MODIFIER	c.165+978C>A c.165+978C>A	SNX12	ENSG00000147164.12	transcript	ENST00000374274.8	protein_coding	1/3	chrX	71067164
chrX:71067165	T T	C C	1	a0001c0001t0002g0032 a0001c0001t0002g0032	1	NA18967.hp1 NA18967.hp1	intron_variant	MODIFIER	c.165+977A>G c.165+977A>G	SNX12	ENSG00000147164.12	transcript	ENST00000374274.8	protein_coding	1/3	chrX	71067165
chrX:71067166	A A	G G	1	a0001c0001t0002g0032 a0001c0001t0002g0032	1	NA18967.hp1 NA18967.hp1	intron_variant	MODIFIER	c.165+976T>C c.165+976T>C	SNX12	ENSG00000147164.12	transcript	ENST00000374274.8	protein_coding	1/3	chrX	71067166
chrX:71067168	T T	G G	1	a0001c0001t0002g0032 a0001c0001t0002g0032	1	NA18967.hp1 NA18967.hp1	intron_variant	MODIFIER	c.165+974A>C c.165+974A>C	SNX12	ENSG00000147164.12	transcript	ENST00000374274.8	protein_coding	1/3	chrX	71067168
chrX:71067169	C C	T T	1	a0001c0001t0002g0032 a0001c0001t0002g0032	1	NA18967.hp1 NA18967.hp1	intron_variant	MODIFIER	c.165+973G>A c.165+973G>A	SNX12	ENSG00000147164.12	transcript	ENST00000374274.8	protein_coding	1/3	chrX	71067169
chrX:71067170	T T	G G	1	a0001c0001t0002g0032 a0001c0001t0002g0032	1	NA18967.hp1 NA18967.hp1	intron_variant	MODIFIER	c.165+972A>C c.165+972A>C	SNX12	ENSG00000147164.12	transcript	ENST00000374274.8	protein_coding	1/3	chrX	71067170
chrX:71067171	A A	T T	1	a0001c0001t0002g0032 a0001c0001t0002g0032	1	NA18967.hp1 NA18967.hp1	intron_variant	MODIFIER	c.165+971T>A c.165+971T>A	SNX12	ENSG00000147164.12	transcript	ENST00000374274.8	protein_coding	1/3	chrX	71067171
chrX:71067290	A A	T T	11	a0001c0001t0001g0041 a0001c0002t0003g0010 a0001c0002t0003g0017 others(8): Show a0001c0001t0001g0041 a0001c0002t0003g0010 a0001c0002t0003g0017 a0001c0002t0003g0043 a0001c0002t0003g0044 a0001c0002t0003g0045 a0001c0002t0003g0046 a0001c0002t0003g0047 a0001c0002t0003g0048 a0001c0002t0003g0084 a0001c0002t0007g0042	18	HG00423.hp2 HG00735.hp1 HG00738.hp1 others(15): Show HG00423.hp2 HG00735.hp1 HG00738.hp1 HG01081.hp2 HG02109.hp2 HG02970.hp1 HG03195.hp1 HG03516.hp2 HG03834.hp1 NA18952.hp1 NA18980.hp1 NA18999.hp1 NA19009.hp1 NA19012.hp1 NA19081.hp2 NA19087.hp2 NA19089.hp1 NA19240.hp1	intron_variant	MODIFIER	c.165+852T>A c.165+852T>A	SNX12	ENSG00000147164.12	transcript	ENST00000374274.8	protein_coding	1/3	chrX	71067290
chrX:71067348	T T	TATA TATA	1	a0001c0001t0001g0031 a0001c0001t0001g0031	1	HG02155.hp2 HG02155.hp2	intron_variant	MODIFIER	c.165+791_165+793dup others(3): Show c.165+791_165+793dupTAT	SNX12	ENSG00000147164.12	transcript	ENST00000374274.8	protein_coding	1/3	chrX	71067348
chrX:71067460	AG AG	A A	2	a0001c0001t0002g0085 a0001c0002t0003g0084 a0001c0001t0002g0085 a0001c0002t0003g0084	2	NA19063.hp1 NA19081.hp2 NA19063.hp1 NA19081.hp2	intron_variant	MODIFIER	c.165+681delC c.165+681delC	SNX12	ENSG00000147164.12	transcript	ENST00000374274.8	protein_coding	1/3	chrX	71067460
chrX:71067539	T T	G G	8	a0001c0001t0001g0007 a0001c0001t0001g0015 a0001c0001t0001g0016 others(5): Show a0001c0001t0001g0007 a0001c0001t0001g0015 a0001c0001t0001g0016 a0001c0001t0001g0036 a0001c0001t0001g0037 a0001c0001t0001g0039 a0001c0001t0004g0012 a0001c0001t0004g0038	21	HG00099.hp1 HG00140.hp1 HG00642.hp1 others(18): Show HG00099.hp1 HG00140.hp1 HG00642.hp1 HG00733.hp2 HG01069.hp1 HG01070.hp1 HG01071.hp2 HG01081.hp1 HG01099.hp1 HG01106.hp1 HG01123.hp1 HG01168.hp2 HG01175.hp2 HG01192.hp1 HG02074.hp1 HG02630.hp1 HG02683.hp1 HG03579.hp1 HG03669.hp2 NA20805.hp1 NA21309.hp1	intron_variant	MODIFIER	c.165+603A>C c.165+603A>C	SNX12	ENSG00000147164.12	transcript	ENST00000374274.8	protein_coding	1/3	chrX	71067539
chrX:71067742	A A	G G	1	a0001c0001t0001g0040 a0001c0001t0001g0040	1	HG02630.hp2 HG02630.hp2	intron_variant	MODIFIER	c.165+400T>C c.165+400T>C	SNX12	ENSG00000147164.12	transcript	ENST00000374274.8	protein_coding	1/3	chrX	71067742
chrX:71067752	T T	C C	1	a0001c0001t0002g0086 a0001c0001t0002g0086	1	NA18966.hp1 NA18966.hp1	intron_variant	MODIFIER	c.165+390A>G c.165+390A>G	SNX12	ENSG00000147164.12	transcript	ENST00000374274.8	protein_coding	1/3	chrX	71067752
chrX:71067833	C C	G G	13	a0001c0001t0001g0007 a0001c0001t0001g0011 a0001c0001t0001g0015 others(10): Show a0001c0001t0001g0007 a0001c0001t0001g0011 a0001c0001t0001g0015 a0001c0001t0001g0016 a0001c0001t0001g0033 a0001c0001t0001g0034 a0001c0001t0001g0035 a0001c0001t0001g0036 a0001c0001t0001g0037 a0001c0001t0001g0039 a0001c0001t0001g0105 a0001c0001t0004g0012 a0001c0001t0004g0038	30	HG00099.hp1 HG00140.hp1 HG00642.hp1 others(27): Show HG00099.hp1 HG00140.hp1 HG00642.hp1 HG00733.hp2 HG01069.hp1 HG01070.hp1 HG01071.hp2 HG01081.hp1 HG01099.hp1 HG01106.hp1 HG01123.hp1 HG01168.hp2 HG01175.hp2 HG01192.hp1 HG01891.hp1 HG02074.hp1 HG02258.hp1 HG02572.hp1 HG02630.hp1 HG02683.hp1 HG02886.hp1 HG02896.hp2 HG02897.hp1 HG02976.hp1 HG03209.hp1 HG03579.hp1 HG03669.hp2 NA18522.hp1 NA20805.hp1 NA21309.hp1	intron_variant	MODIFIER	c.165+309G>C c.165+309G>C	SNX12	ENSG00000147164.12	transcript	ENST00000374274.8	protein_coding	1/3	chrX	71067833
chrX:71067927	T T	C C	26	a0001c0001t0001g0003 a0001c0001t0001g0005 a0001c0001t0001g0019 others(23): Show a0001c0001t0001g0003 a0001c0001t0001g0005 a0001c0001t0001g0019 a0001c0001t0001g0020 a0001c0001t0001g0028 a0001c0001t0001g0029 a0001c0001t0001g0031 a0001c0001t0001g0087 a0001c0001t0001g0088 a0001c0001t0001g0091 a0001c0001t0001g0092 a0001c0001t0001g0093 a0001c0001t0001g0095 a0001c0001t0001g0097 a0001c0001t0001g0098 a0001c0001t0001g0099 a0001c0001t0001g0101 a0001c0001t0001g0102 a0001c0001t0001g0103 a0001c0001t0001g0104 a0001c0001t0002g0009 a0001c0001t0002g0100 a0001c0001t0011g0096 a0001c0001t0013g0089 a0001c0001t0014g0094 a0001c0001t0015g0090	69	HG00099.hp2 HG00323.hp2 HG00741.hp1 others(66): Show HG00099.hp2 HG00323.hp2 HG00741.hp1 HG01175.hp1 HG01261.hp1 HG01361.hp1 HG01433.hp1 HG01891.hp2 HG02109.hp1 HG02155.hp2 HG02165.hp2 HG02486.hp1 HG02523.hp1 HG02559.hp1 HG02622.hp2 HG02647.hp1 HG02698.hp1 HG02809.hp1 HG02895.hp1 HG02896.hp1 HG02897.hp2 HG02922.hp1 HG02965.hp1 HG02970.hp2 HG03017.hp1 HG03041.hp2 HG03139.hp1 HG03225.hp1 HG03239.hp2 HG03471.hp1 HG03486.hp1 HG03540.hp1 HG03654.hp1 HG03710.hp1 HG03831.hp1 HG03834.hp2 HG03942.hp1 HG04184.hp2 HG06807.hp2 NA18906.hp1 NA18941.hp1 NA18941.hp2 NA18947.hp2 NA18957.hp1 NA18960.hp1 NA18968.hp1 NA18969.hp2 NA18970.hp1 NA18978.hp2 NA18980.hp2 NA18981.hp2 NA18988.hp1 NA18999.hp2 NA19030.hp1 NA19043.hp1 NA19058.hp1 NA19066.hp1 NA19067.hp1 NA19078.hp1 NA19079.hp1 NA19082.hp1 NA19083.hp1 NA19088.hp1 NA19090.hp1 NA19090.hp2 NA20300.hp2 NA20752.hp1 NA21309.hp2 homoSapiens_chm13v2.hp1	intron_variant	MODIFIER	c.165+215A>G c.165+215A>G	SNX12	ENSG00000147164.12	transcript	ENST00000374274.8	protein_coding	1/3	chrX	71067927
chrX:71067977	C C	A A	1	a0001c0001t0002g0032 a0001c0001t0002g0032	1	NA18967.hp1 NA18967.hp1	intron_variant	MODIFIER	c.165+165G>T c.165+165G>T	SNX12	ENSG00000147164.12	transcript	ENST00000374274.8	protein_coding	1/3	chrX	71067977
chrX:71067978	A A	C C	1	a0001c0001t0002g0032 a0001c0001t0002g0032	1	NA18967.hp1 NA18967.hp1	intron_variant	MODIFIER	c.165+164T>G c.165+164T>G	SNX12	ENSG00000147164.12	transcript	ENST00000374274.8	protein_coding	1/3	chrX	71067978
chrX:71067982	G G	A A	1	a0001c0001t0002g0032 a0001c0001t0002g0032	1	NA18967.hp1 NA18967.hp1	intron_variant	MODIFIER	c.165+160C>T c.165+160C>T	SNX12	ENSG00000147164.12	transcript	ENST00000374274.8	protein_coding	1/3	chrX	71067982
chrX:71067983	A A	G G	1	a0001c0001t0002g0032 a0001c0001t0002g0032	1	NA18967.hp1 NA18967.hp1	intron_variant	MODIFIER	c.165+159T>C c.165+159T>C	SNX12	ENSG00000147164.12	transcript	ENST00000374274.8	protein_coding	1/3	chrX	71067983
chrX:71067988	G G	C C	1	a0001c0001t0002g0032 a0001c0001t0002g0032	1	NA18967.hp1 NA18967.hp1	intron_variant	MODIFIER	c.165+154C>G c.165+154C>G	SNX12	ENSG00000147164.12	transcript	ENST00000374274.8	protein_coding	1/3	chrX	71067988
chrX:71067989	C C	G G	1	a0001c0001t0002g0032 a0001c0001t0002g0032	1	NA18967.hp1 NA18967.hp1	intron_variant	MODIFIER	c.165+153G>C c.165+153G>C	SNX12	ENSG00000147164.12	transcript	ENST00000374274.8	protein_coding	1/3	chrX	71067989
chrX:71067990	A A	T T	1	a0001c0001t0002g0032 a0001c0001t0002g0032	1	NA18967.hp1 NA18967.hp1	intron_variant	MODIFIER	c.165+152T>A c.165+152T>A	SNX12	ENSG00000147164.12	transcript	ENST00000374274.8	protein_coding	1/3	chrX	71067990
chrX:71067991	G G	GTT GTT	1	a0001c0001t0002g0032 a0001c0001t0002g0032	1	NA18967.hp1 NA18967.hp1	intron_variant	MODIFIER	c.165+150_165+151ins others(2): Show c.165+150_165+151insAA	SNX12	ENSG00000147164.12	transcript	ENST00000374274.8	protein_coding	1/3	chrX	71067991
chrX:71068031	A A	AC AC	1	a0001c0001t0001g0031 a0001c0001t0001g0031	1	HG02155.hp2 HG02155.hp2	intron_variant	MODIFIER	c.165+110dupG c.165+110dupG	SNX12	ENSG00000147164.12	transcript	ENST00000374274.8	protein_coding	1/3	chrX	71068031
chrX:71068032	C C	T T	1	a0001c0001t0001g0030 a0001c0001t0001g0030	1	HG03490.hp1 HG03490.hp1	intron_variant	MODIFIER	c.165+110G>A c.165+110G>A	SNX12	ENSG00000147164.12	transcript	ENST00000374274.8	protein_coding	1/3	chrX	71068032
chrX:71068067	G G	C C	1	a0001c0001t0001g0105 a0001c0001t0001g0105	1	HG02976.hp1 HG02976.hp1	intron_variant	MODIFIER	c.165+75C>G c.165+75C>G	SNX12	ENSG00000147164.12	transcript	ENST00000374274.8	protein_coding	1/3	chrX	71068067

Search by Genic region

Search

🧬 JoGo Online Haplotype Explorer SNX12_chrX_71054247_71073334

JoGo Local Haplotype Explorer (on iGV) SNX12_chrX_71054247_71073334

Translation Multiple Alignment View

ACTG-Haplotype Mutation Positions 3D Viewer

🧬 Gene Summary

AAmino acid(protein) Level Haplotype Info (Total: 2)

CCoding Level Haplotype Info (Total: 3)

TTranscript Level Haplotype Info (Total: 15)

GGenebody Level Haplotype Info (Total: 105)

A C AC Level (Amino Acid + Coding) Haplotype Info (Total: 3)

A C T ACT Level (Amino Acid + Coding + Transcript) Haplotype Info (Total: 16)

A C T G ACTG Level (Amino Acid + Coding + Transcript + Genebody) Haplotype Info (Total: 105)

Haplotype Details by Sample (Haploid Level) (Total: 309)

AAmino acid(protein) Level Haplotype Related Variants (Effect to Protein Coding Variants) (Total: 1)

CCoding Level Variants (Synonymous Mutations) (Total: 1)

TTranscript Level Haplotype Variants (5'UTR+3'UTR) (Total: 17)

GGenebody Level Haplotype Variants (Intron) (Total: 120)

External Link

Annotation (Repeats)

Annotation (SNP Array)