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ALDH2_chr12_111761933_111822532 / BRCA1_chr17_43039295_43130364 etc.

  Error connecting to IGV?   HOXC8_chr12_54003985_54017769  HOXC8_chr12_54003985_54017769 (clean+top1000)

Multiple Alignments (by translate haplotype frequency)Multiple Alignments (by aa haplotype frequency) Multiple Alignments (by translate haplotype similarity)Multiple Alignments (by aa haplotype similarity)

Item Value
geneid 3224
ensemblid ENSG00000037965.6
hgncid 5129
symbol HOXC8
name homeobox C8
refseq_nuc NM_022658.4
refseq_prot NP_073149.1
ensembl_nuc ENST00000040584.6
ensembl_prot ENSP00000040584.4
mane_status MANE Select
chr chr12
start 54008985
end 54012769
strand +
ver v1.2
region chr12:54008985-54012769
region5000 chr12:54003985-54017769
regionname0 HOXC8_chr12_54008985_54012769
regionname5000 HOXC8_chr12_54003985_54017769

ahapid grch38/
chm13v2 		alen total AFR AMR EAS EUR SAS JPT regionname genename aa chr start end
a0001 1/1 242 299 75 56 125 14 27 91 HOXC8_chr12_54003985_54017769 HOXC8 copy fasta chr12 54003985 54017769
a0002 0/0 242 3 1 2 0 0 0 0 HOXC8_chr12_54003985_54017769 HOXC8 copy fasta chr12 54003985 54017769
a0003 0/0 242 1 0 0 0 0 1 0 HOXC8_chr12_54003985_54017769 HOXC8 copy fasta chr12 54003985 54017769
a0004 0/0 242 1 1 0 0 0 0 0 HOXC8_chr12_54003985_54017769 HOXC8 copy fasta chr12 54003985 54017769
a0005 0/0 237 1 1 0 0 0 0 0 HOXC8_chr12_54003985_54017769 HOXC8 copy fasta chr12 54003985 54017769
a0006 0/0 231 1 0 0 1 0 0 1 HOXC8_chr12_54003985_54017769 HOXC8 copy fasta chr12 54003985 54017769

chapid grch38/
chm13v2 		alen clen total AFR AMR EAS EUR SAS regionname genename cseq chr start end
c0001 1/1 729 298 75 55 125 14 27 HOXC8_chr12_54003985_54017769 HOXC8 copy fasta chr12 54003985 54017769
c0002 0/0 729 3 1 2 0 0 0 HOXC8_chr12_54003985_54017769 HOXC8 copy fasta chr12 54003985 54017769
c0003 0/0 714 1 1 0 0 0 0 HOXC8_chr12_54003985_54017769 HOXC8 copy fasta chr12 54003985 54017769
c0004 0/0 729 1 1 0 0 0 0 HOXC8_chr12_54003985_54017769 HOXC8 copy fasta chr12 54003985 54017769
c0005 0/0 729 1 0 0 0 0 1 HOXC8_chr12_54003985_54017769 HOXC8 copy fasta chr12 54003985 54017769
c0006 0/0 729 1 0 0 1 0 0 HOXC8_chr12_54003985_54017769 HOXC8 copy fasta chr12 54003985 54017769
c0007 0/0 729 1 0 1 0 0 0 HOXC8_chr12_54003985_54017769 HOXC8 copy fasta chr12 54003985 54017769

thapid grch38
chm13v2 		tlen total AFR AMR EAS EUR SAS regionname genename tseq chr start end
t0001 0/0 1686 70 8 11 39 1 11 HOXC8_chr12_54003985_54017769 HOXC8 copy fasta chr12 54003985 54017769
t0002 1/0 1689 48 19 11 12 0 5 HOXC8_chr12_54003985_54017769 HOXC8 copy fasta chr12 54003985 54017769
t0003 0/0 1691 32 2 13 12 4 1 HOXC8_chr12_54003985_54017769 HOXC8 copy fasta chr12 54003985 54017769
t0004 0/0 1690 13 0 1 11 1 0 HOXC8_chr12_54003985_54017769 HOXC8 copy fasta chr12 54003985 54017769
t0005 0/0 1690 13 3 0 10 0 0 HOXC8_chr12_54003985_54017769 HOXC8 copy fasta chr12 54003985 54017769
t0006 0/0 1687 12 4 1 7 0 0 HOXC8_chr12_54003985_54017769 HOXC8 copy fasta chr12 54003985 54017769
t0007 0/0 1685 10 1 4 1 4 0 HOXC8_chr12_54003985_54017769 HOXC8 copy fasta chr12 54003985 54017769
t0008 0/0 1690 9 3 0 4 0 2 HOXC8_chr12_54003985_54017769 HOXC8 copy fasta chr12 54003985 54017769
t0009 0/0 1687 7 2 0 3 0 2 HOXC8_chr12_54003985_54017769 HOXC8 copy fasta chr12 54003985 54017769
t0010 0/0 1691 6 0 2 4 0 0 HOXC8_chr12_54003985_54017769 HOXC8 copy fasta chr12 54003985 54017769
t0011 0/0 1686 5 0 0 5 0 0 HOXC8_chr12_54003985_54017769 HOXC8 copy fasta chr12 54003985 54017769
t0012 0/0 1689 5 4 0 1 0 0 HOXC8_chr12_54003985_54017769 HOXC8 copy fasta chr12 54003985 54017769
t0013 0/0 1690 4 0 1 3 0 0 HOXC8_chr12_54003985_54017769 HOXC8 copy fasta chr12 54003985 54017769
t0014 0/0 1688 4 0 3 0 1 0 HOXC8_chr12_54003985_54017769 HOXC8 copy fasta chr12 54003985 54017769
t0015 0/0 1688 4 3 1 0 0 0 HOXC8_chr12_54003985_54017769 HOXC8 copy fasta chr12 54003985 54017769
t0016 0/0 1689 4 3 1 0 0 0 HOXC8_chr12_54003985_54017769 HOXC8 copy fasta chr12 54003985 54017769
t0017 0/0 1687 3 2 1 0 0 0 HOXC8_chr12_54003985_54017769 HOXC8 copy fasta chr12 54003985 54017769
t0018 0/0 1691 3 0 0 2 1 0 HOXC8_chr12_54003985_54017769 HOXC8 copy fasta chr12 54003985 54017769
t0019 0/0 1688 3 3 0 0 0 0 HOXC8_chr12_54003985_54017769 HOXC8 copy fasta chr12 54003985 54017769
t0020 0/0 1690 3 3 0 0 0 0 HOXC8_chr12_54003985_54017769 HOXC8 copy fasta chr12 54003985 54017769
t0021 0/0 1686 2 0 0 2 0 0 HOXC8_chr12_54003985_54017769 HOXC8 copy fasta chr12 54003985 54017769
t0022 0/1 1688 2 0 0 1 0 0 HOXC8_chr12_54003985_54017769 HOXC8 copy fasta chr12 54003985 54017769
t0023 0/0 1687 2 0 0 2 0 0 HOXC8_chr12_54003985_54017769 HOXC8 copy fasta chr12 54003985 54017769
t0024 0/0 1688 2 2 0 0 0 0 HOXC8_chr12_54003985_54017769 HOXC8 copy fasta chr12 54003985 54017769
t0025 0/0 1686 2 2 0 0 0 0 HOXC8_chr12_54003985_54017769 HOXC8 copy fasta chr12 54003985 54017769
t0026 0/0 1690 2 1 1 0 0 0 HOXC8_chr12_54003985_54017769 HOXC8 copy fasta chr12 54003985 54017769
t0027 0/0 1689 2 0 0 0 0 2 HOXC8_chr12_54003985_54017769 HOXC8 copy fasta chr12 54003985 54017769
t0028 0/0 1690 2 2 0 0 0 0 HOXC8_chr12_54003985_54017769 HOXC8 copy fasta chr12 54003985 54017769
t0029 0/0 1689 1 1 0 0 0 0 HOXC8_chr12_54003985_54017769 HOXC8 copy fasta chr12 54003985 54017769
t0030 0/0 1688 1 0 1 0 0 0 HOXC8_chr12_54003985_54017769 HOXC8 copy fasta chr12 54003985 54017769
t0031 0/0 1687 1 0 1 0 0 0 HOXC8_chr12_54003985_54017769 HOXC8 copy fasta chr12 54003985 54017769
t0032 0/0 1685 1 0 0 1 0 0 HOXC8_chr12_54003985_54017769 HOXC8 copy fasta chr12 54003985 54017769
t0033 0/0 1686 1 0 0 1 0 0 HOXC8_chr12_54003985_54017769 HOXC8 copy fasta chr12 54003985 54017769
t0034 0/0 1687 1 0 0 1 0 0 HOXC8_chr12_54003985_54017769 HOXC8 copy fasta chr12 54003985 54017769
t0035 0/0 1686 1 0 0 1 0 0 HOXC8_chr12_54003985_54017769 HOXC8 copy fasta chr12 54003985 54017769
t0036 0/0 1686 1 0 0 0 1 0 HOXC8_chr12_54003985_54017769 HOXC8 copy fasta chr12 54003985 54017769
t0037 0/0 1686 1 0 0 0 0 1 HOXC8_chr12_54003985_54017769 HOXC8 copy fasta chr12 54003985 54017769
t0038 0/0 1687 1 1 0 0 0 0 HOXC8_chr12_54003985_54017769 HOXC8 copy fasta chr12 54003985 54017769
t0039 0/0 1687 1 1 0 0 0 0 HOXC8_chr12_54003985_54017769 HOXC8 copy fasta chr12 54003985 54017769
t0040 0/0 1685 1 0 1 0 0 0 HOXC8_chr12_54003985_54017769 HOXC8 copy fasta chr12 54003985 54017769
t0041 0/0 1687 1 1 0 0 0 0 HOXC8_chr12_54003985_54017769 HOXC8 copy fasta chr12 54003985 54017769
t0042 0/0 1685 1 0 1 0 0 0 HOXC8_chr12_54003985_54017769 HOXC8 copy fasta chr12 54003985 54017769
t0043 0/0 1684 1 0 0 0 1 0 HOXC8_chr12_54003985_54017769 HOXC8 copy fasta chr12 54003985 54017769
t0044 0/0 1713 1 1 0 0 0 0 HOXC8_chr12_54003985_54017769 HOXC8 copy fasta chr12 54003985 54017769
t0045 0/0 1692 1 0 0 1 0 0 HOXC8_chr12_54003985_54017769 HOXC8 copy fasta chr12 54003985 54017769
t0046 0/0 1692 1 0 0 1 0 0 HOXC8_chr12_54003985_54017769 HOXC8 copy fasta chr12 54003985 54017769
t0047 0/0 1690 1 0 0 0 0 1 HOXC8_chr12_54003985_54017769 HOXC8 copy fasta chr12 54003985 54017769
t0048 0/0 1689 1 0 0 0 0 1 HOXC8_chr12_54003985_54017769 HOXC8 copy fasta chr12 54003985 54017769
t0049 0/0 1690 1 0 0 1 0 0 HOXC8_chr12_54003985_54017769 HOXC8 copy fasta chr12 54003985 54017769
t0050 0/0 1691 1 0 1 0 0 0 HOXC8_chr12_54003985_54017769 HOXC8 copy fasta chr12 54003985 54017769
t0051 0/0 1690 1 1 0 0 0 0 HOXC8_chr12_54003985_54017769 HOXC8 copy fasta chr12 54003985 54017769
t0052 0/0 1689 1 0 1 0 0 0 HOXC8_chr12_54003985_54017769 HOXC8 copy fasta chr12 54003985 54017769
t0053 0/0 1692 1 0 0 0 0 1 HOXC8_chr12_54003985_54017769 HOXC8 copy fasta chr12 54003985 54017769
t0054 0/0 1689 1 1 0 0 0 0 HOXC8_chr12_54003985_54017769 HOXC8 copy fasta chr12 54003985 54017769
t0055 0/0 1691 1 0 0 0 0 1 HOXC8_chr12_54003985_54017769 HOXC8 copy fasta chr12 54003985 54017769
t0056 0/0 1688 1 1 0 0 0 0 HOXC8_chr12_54003985_54017769 HOXC8 copy fasta chr12 54003985 54017769
t0057 0/0 1691 1 1 0 0 0 0 HOXC8_chr12_54003985_54017769 HOXC8 copy fasta chr12 54003985 54017769
t0058 0/0 1690 1 0 1 0 0 0 HOXC8_chr12_54003985_54017769 HOXC8 copy fasta chr12 54003985 54017769
t0059 0/0 1689 1 1 0 0 0 0 HOXC8_chr12_54003985_54017769 HOXC8 copy fasta chr12 54003985 54017769
t0060 0/0 1690 1 1 0 0 0 0 HOXC8_chr12_54003985_54017769 HOXC8 copy fasta chr12 54003985 54017769

ghapid grch38/
chm13v2 		total AFR AMR EAS EUR SAS regionname genename chr start end
g0001 1/1 297 76 56 123 14 26 HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
g0002 0/0 2 0 1 0 0 1 HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
g0003 0/0 1 0 0 0 0 1 HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
g0004 0/0 1 0 0 1 0 0 HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
g0005 0/0 1 0 0 1 0 0 HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
g0006 0/0 1 1 0 0 0 0 HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
g0007 0/0 1 0 1 0 0 0 HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
g0008 0/0 1 1 0 0 0 0 HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
g0009 0/0 1 0 0 1 0 0 HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769

achapid grch38/
chm13v2 		alen clen total AFR AMR EAS EUR SAS regionname genename cseq chr start end
a0001c0001 1/1 729 298 75 55 125 14 27 HOXC8_chr12_54003985_54017769 HOXC8 copy fasta chr12 54003985 54017769
a0001c0007 0/0 729 1 0 1 0 0 0 HOXC8_chr12_54003985_54017769 HOXC8 copy fasta chr12 54003985 54017769
a0002c0002 0/0 729 3 1 2 0 0 0 HOXC8_chr12_54003985_54017769 HOXC8 copy fasta chr12 54003985 54017769
a0003c0005 0/0 729 1 0 0 0 0 1 HOXC8_chr12_54003985_54017769 HOXC8 copy fasta chr12 54003985 54017769
a0004c0004 0/0 729 1 1 0 0 0 0 HOXC8_chr12_54003985_54017769 HOXC8 copy fasta chr12 54003985 54017769
a0005c0003 0/0 714 1 1 0 0 0 0 HOXC8_chr12_54003985_54017769 HOXC8 copy fasta chr12 54003985 54017769
a0006c0006 0/0 729 1 0 0 1 0 0 HOXC8_chr12_54003985_54017769 HOXC8 copy fasta chr12 54003985 54017769

acthapid grch38
chm13v2 		tlen total AFR AMR EAS EUR SAS regionname genename tseq chr start end
a0001c0001t0001 0/0 2414 70 8 11 39 1 11 HOXC8_chr12_54003985_54017769 HOXC8 copy fasta chr12 54003985 54017769
a0001c0001t0002 1/0 2417 48 19 11 12 0 5 HOXC8_chr12_54003985_54017769 HOXC8 copy fasta chr12 54003985 54017769
a0001c0001t0003 0/0 2419 32 2 13 12 4 1 HOXC8_chr12_54003985_54017769 HOXC8 copy fasta chr12 54003985 54017769
a0001c0001t0004 0/0 2418 13 0 1 11 1 0 HOXC8_chr12_54003985_54017769 HOXC8 copy fasta chr12 54003985 54017769
a0001c0001t0005 0/0 2418 13 3 0 10 0 0 HOXC8_chr12_54003985_54017769 HOXC8 copy fasta chr12 54003985 54017769
a0001c0001t0006 0/0 2415 12 4 1 7 0 0 HOXC8_chr12_54003985_54017769 HOXC8 copy fasta chr12 54003985 54017769
a0001c0001t0007 0/0 2413 9 1 3 1 4 0 HOXC8_chr12_54003985_54017769 HOXC8 copy fasta chr12 54003985 54017769
a0001c0001t0008 0/0 2418 9 3 0 4 0 2 HOXC8_chr12_54003985_54017769 HOXC8 copy fasta chr12 54003985 54017769
a0001c0001t0009 0/0 2415 6 2 0 3 0 1 HOXC8_chr12_54003985_54017769 HOXC8 copy fasta chr12 54003985 54017769
a0001c0001t0010 0/0 2419 6 0 2 4 0 0 HOXC8_chr12_54003985_54017769 HOXC8 copy fasta chr12 54003985 54017769
a0001c0001t0011 0/0 2414 5 0 0 5 0 0 HOXC8_chr12_54003985_54017769 HOXC8 copy fasta chr12 54003985 54017769
a0001c0001t0012 0/0 2417 5 4 0 1 0 0 HOXC8_chr12_54003985_54017769 HOXC8 copy fasta chr12 54003985 54017769
a0001c0001t0013 0/0 2418 4 0 1 3 0 0 HOXC8_chr12_54003985_54017769 HOXC8 copy fasta chr12 54003985 54017769
a0001c0001t0014 0/0 2416 4 0 3 0 1 0 HOXC8_chr12_54003985_54017769 HOXC8 copy fasta chr12 54003985 54017769
a0001c0001t0015 0/0 2416 4 3 1 0 0 0 HOXC8_chr12_54003985_54017769 HOXC8 copy fasta chr12 54003985 54017769
a0001c0001t0016 0/0 2417 4 3 1 0 0 0 HOXC8_chr12_54003985_54017769 HOXC8 copy fasta chr12 54003985 54017769
a0001c0001t0017 0/0 2415 2 1 1 0 0 0 HOXC8_chr12_54003985_54017769 HOXC8 copy fasta chr12 54003985 54017769
a0001c0001t0018 0/0 2419 3 0 0 2 1 0 HOXC8_chr12_54003985_54017769 HOXC8 copy fasta chr12 54003985 54017769
a0001c0001t0019 0/0 2416 3 3 0 0 0 0 HOXC8_chr12_54003985_54017769 HOXC8 copy fasta chr12 54003985 54017769
a0001c0001t0020 0/0 2418 1 1 0 0 0 0 HOXC8_chr12_54003985_54017769 HOXC8 copy fasta chr12 54003985 54017769
a0001c0001t0021 0/0 2414 2 0 0 2 0 0 HOXC8_chr12_54003985_54017769 HOXC8 copy fasta chr12 54003985 54017769
a0001c0001t0022 0/1 2416 2 0 0 1 0 0 HOXC8_chr12_54003985_54017769 HOXC8 copy fasta chr12 54003985 54017769
a0001c0001t0023 0/0 2415 2 0 0 2 0 0 HOXC8_chr12_54003985_54017769 HOXC8 copy fasta chr12 54003985 54017769
a0001c0001t0024 0/0 2416 2 2 0 0 0 0 HOXC8_chr12_54003985_54017769 HOXC8 copy fasta chr12 54003985 54017769
a0001c0001t0025 0/0 2414 2 2 0 0 0 0 HOXC8_chr12_54003985_54017769 HOXC8 copy fasta chr12 54003985 54017769
a0001c0001t0026 0/0 2418 1 1 0 0 0 0 HOXC8_chr12_54003985_54017769 HOXC8 copy fasta chr12 54003985 54017769
a0001c0001t0027 0/0 2417 2 0 0 0 0 2 HOXC8_chr12_54003985_54017769 HOXC8 copy fasta chr12 54003985 54017769
a0001c0001t0028 0/0 2418 2 2 0 0 0 0 HOXC8_chr12_54003985_54017769 HOXC8 copy fasta chr12 54003985 54017769
a0001c0001t0029 0/0 2417 1 1 0 0 0 0 HOXC8_chr12_54003985_54017769 HOXC8 copy fasta chr12 54003985 54017769
a0001c0001t0031 0/0 2415 1 0 1 0 0 0 HOXC8_chr12_54003985_54017769 HOXC8 copy fasta chr12 54003985 54017769
a0001c0001t0032 0/0 2413 1 0 0 1 0 0 HOXC8_chr12_54003985_54017769 HOXC8 copy fasta chr12 54003985 54017769
a0001c0001t0033 0/0 2414 1 0 0 1 0 0 HOXC8_chr12_54003985_54017769 HOXC8 copy fasta chr12 54003985 54017769
a0001c0001t0034 0/0 2415 1 0 0 1 0 0 HOXC8_chr12_54003985_54017769 HOXC8 copy fasta chr12 54003985 54017769
a0001c0001t0035 0/0 2414 1 0 0 1 0 0 HOXC8_chr12_54003985_54017769 HOXC8 copy fasta chr12 54003985 54017769
a0001c0001t0036 0/0 2414 1 0 0 0 1 0 HOXC8_chr12_54003985_54017769 HOXC8 copy fasta chr12 54003985 54017769
a0001c0001t0037 0/0 2414 1 0 0 0 0 1 HOXC8_chr12_54003985_54017769 HOXC8 copy fasta chr12 54003985 54017769
a0001c0001t0038 0/0 2415 1 1 0 0 0 0 HOXC8_chr12_54003985_54017769 HOXC8 copy fasta chr12 54003985 54017769
a0001c0001t0039 0/0 2415 1 1 0 0 0 0 HOXC8_chr12_54003985_54017769 HOXC8 copy fasta chr12 54003985 54017769
a0001c0001t0040 0/0 2413 1 0 1 0 0 0 HOXC8_chr12_54003985_54017769 HOXC8 copy fasta chr12 54003985 54017769
a0001c0001t0041 0/0 2415 1 1 0 0 0 0 HOXC8_chr12_54003985_54017769 HOXC8 copy fasta chr12 54003985 54017769
a0001c0001t0042 0/0 2413 1 0 1 0 0 0 HOXC8_chr12_54003985_54017769 HOXC8 copy fasta chr12 54003985 54017769
a0001c0001t0043 0/0 2412 1 0 0 0 1 0 HOXC8_chr12_54003985_54017769 HOXC8 copy fasta chr12 54003985 54017769
a0001c0001t0044 0/0 2441 1 1 0 0 0 0 HOXC8_chr12_54003985_54017769 HOXC8 copy fasta chr12 54003985 54017769
a0001c0001t0045 0/0 2420 1 0 0 1 0 0 HOXC8_chr12_54003985_54017769 HOXC8 copy fasta chr12 54003985 54017769
a0001c0001t0046 0/0 2420 1 0 0 1 0 0 HOXC8_chr12_54003985_54017769 HOXC8 copy fasta chr12 54003985 54017769
a0001c0001t0047 0/0 2418 1 0 0 0 0 1 HOXC8_chr12_54003985_54017769 HOXC8 copy fasta chr12 54003985 54017769
a0001c0001t0048 0/0 2417 1 0 0 0 0 1 HOXC8_chr12_54003985_54017769 HOXC8 copy fasta chr12 54003985 54017769
a0001c0001t0050 0/0 2419 1 0 1 0 0 0 HOXC8_chr12_54003985_54017769 HOXC8 copy fasta chr12 54003985 54017769
a0001c0001t0051 0/0 2418 1 1 0 0 0 0 HOXC8_chr12_54003985_54017769 HOXC8 copy fasta chr12 54003985 54017769
a0001c0001t0052 0/0 2417 1 0 1 0 0 0 HOXC8_chr12_54003985_54017769 HOXC8 copy fasta chr12 54003985 54017769
a0001c0001t0053 0/0 2420 1 0 0 0 0 1 HOXC8_chr12_54003985_54017769 HOXC8 copy fasta chr12 54003985 54017769
a0001c0001t0054 0/0 2417 1 1 0 0 0 0 HOXC8_chr12_54003985_54017769 HOXC8 copy fasta chr12 54003985 54017769
a0001c0001t0055 0/0 2419 1 0 0 0 0 1 HOXC8_chr12_54003985_54017769 HOXC8 copy fasta chr12 54003985 54017769
a0001c0001t0056 0/0 2416 1 1 0 0 0 0 HOXC8_chr12_54003985_54017769 HOXC8 copy fasta chr12 54003985 54017769
a0001c0001t0057 0/0 2419 1 1 0 0 0 0 HOXC8_chr12_54003985_54017769 HOXC8 copy fasta chr12 54003985 54017769
a0001c0001t0058 0/0 2418 1 0 1 0 0 0 HOXC8_chr12_54003985_54017769 HOXC8 copy fasta chr12 54003985 54017769
a0001c0001t0059 0/0 2417 1 1 0 0 0 0 HOXC8_chr12_54003985_54017769 HOXC8 copy fasta chr12 54003985 54017769
a0001c0001t0060 0/0 2418 1 1 0 0 0 0 HOXC8_chr12_54003985_54017769 HOXC8 copy fasta chr12 54003985 54017769
a0001c0007t0026 0/0 2418 1 0 1 0 0 0 HOXC8_chr12_54003985_54017769 HOXC8 copy fasta chr12 54003985 54017769
a0002c0002t0007 0/0 2413 1 0 1 0 0 0 HOXC8_chr12_54003985_54017769 HOXC8 copy fasta chr12 54003985 54017769
a0002c0002t0017 0/0 2415 1 1 0 0 0 0 HOXC8_chr12_54003985_54017769 HOXC8 copy fasta chr12 54003985 54017769
a0002c0002t0030 0/0 2416 1 0 1 0 0 0 HOXC8_chr12_54003985_54017769 HOXC8 copy fasta chr12 54003985 54017769
a0003c0005t0009 0/0 2415 1 0 0 0 0 1 HOXC8_chr12_54003985_54017769 HOXC8 copy fasta chr12 54003985 54017769
a0004c0004t0020 0/0 2418 1 1 0 0 0 0 HOXC8_chr12_54003985_54017769 HOXC8 copy fasta chr12 54003985 54017769
a0005c0003t0020 0/0 2403 1 1 0 0 0 0 HOXC8_chr12_54003985_54017769 HOXC8 copy fasta chr12 54003985 54017769
a0006c0006t0049 0/0 2418 1 0 0 1 0 0 HOXC8_chr12_54003985_54017769 HOXC8 copy fasta chr12 54003985 54017769

actghapid grch38/
chm13v2 		total AFR AMR EAS EUR SAS regionname genename chr start end
a0001c0001t0001g0001 0/0 68 7 11 38 1 11 HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
a0001c0001t0001g0004 0/0 1 0 0 1 0 0 HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
a0001c0001t0001g0008 0/0 1 1 0 0 0 0 HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
a0001c0001t0002g0001 1/0 46 19 10 12 0 4 HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
a0001c0001t0002g0002 0/0 2 0 1 0 0 1 HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
a0001c0001t0003g0001 0/0 32 2 13 12 4 1 HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
a0001c0001t0004g0001 0/0 13 0 1 11 1 0 HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
a0001c0001t0005g0001 0/0 12 3 0 9 0 0 HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
a0001c0001t0005g0005 0/0 1 0 0 1 0 0 HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
a0001c0001t0006g0001 0/0 12 4 1 7 0 0 HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
a0001c0001t0007g0001 0/0 9 1 3 1 4 0 HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
a0001c0001t0008g0001 0/0 9 3 0 4 0 2 HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
a0001c0001t0009g0001 0/0 6 2 0 3 0 1 HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
a0001c0001t0010g0001 0/0 6 0 2 4 0 0 HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
a0001c0001t0011g0001 0/0 5 0 0 5 0 0 HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
a0001c0001t0012g0001 0/0 5 4 0 1 0 0 HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
a0001c0001t0013g0001 0/0 4 0 1 3 0 0 HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
a0001c0001t0014g0001 0/0 4 0 3 0 1 0 HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
a0001c0001t0015g0001 0/0 4 3 1 0 0 0 HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
a0001c0001t0016g0001 0/0 4 3 1 0 0 0 HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
a0001c0001t0017g0001 0/0 2 1 1 0 0 0 HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
a0001c0001t0018g0001 0/0 3 0 0 2 1 0 HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
a0001c0001t0019g0001 0/0 3 3 0 0 0 0 HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
a0001c0001t0020g0001 0/0 1 1 0 0 0 0 HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
a0001c0001t0021g0001 0/0 2 0 0 2 0 0 HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
a0001c0001t0022g0001 0/1 2 0 0 1 0 0 HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
a0001c0001t0023g0001 0/0 2 0 0 2 0 0 HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
a0001c0001t0024g0001 0/0 2 2 0 0 0 0 HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
a0001c0001t0025g0001 0/0 2 2 0 0 0 0 HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
a0001c0001t0026g0001 0/0 1 1 0 0 0 0 HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
a0001c0001t0027g0001 0/0 2 0 0 0 0 2 HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
a0001c0001t0028g0001 0/0 2 2 0 0 0 0 HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
a0001c0001t0029g0001 0/0 1 1 0 0 0 0 HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
a0001c0001t0031g0001 0/0 1 0 1 0 0 0 HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
a0001c0001t0032g0001 0/0 1 0 0 1 0 0 HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
a0001c0001t0033g0001 0/0 1 0 0 1 0 0 HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
a0001c0001t0034g0001 0/0 1 0 0 1 0 0 HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
a0001c0001t0035g0001 0/0 1 0 0 1 0 0 HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
a0001c0001t0036g0001 0/0 1 0 0 0 1 0 HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
a0001c0001t0037g0003 0/0 1 0 0 0 0 1 HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
a0001c0001t0038g0001 0/0 1 1 0 0 0 0 HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
a0001c0001t0039g0001 0/0 1 1 0 0 0 0 HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
a0001c0001t0040g0001 0/0 1 0 1 0 0 0 HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
a0001c0001t0041g0001 0/0 1 1 0 0 0 0 HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
a0001c0001t0042g0001 0/0 1 0 1 0 0 0 HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
a0001c0001t0043g0001 0/0 1 0 0 0 1 0 HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
a0001c0001t0044g0001 0/0 1 1 0 0 0 0 HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
a0001c0001t0045g0001 0/0 1 0 0 1 0 0 HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
a0001c0001t0046g0001 0/0 1 0 0 1 0 0 HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
a0001c0001t0047g0001 0/0 1 0 0 0 0 1 HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
a0001c0001t0048g0001 0/0 1 0 0 0 0 1 HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
a0001c0001t0050g0001 0/0 1 0 1 0 0 0 HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
a0001c0001t0051g0001 0/0 1 1 0 0 0 0 HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
a0001c0001t0052g0001 0/0 1 0 1 0 0 0 HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
a0001c0001t0053g0001 0/0 1 0 0 0 0 1 HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
a0001c0001t0054g0006 0/0 1 1 0 0 0 0 HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
a0001c0001t0055g0001 0/0 1 0 0 0 0 1 HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
a0001c0001t0056g0001 0/0 1 1 0 0 0 0 HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
a0001c0001t0057g0001 0/0 1 1 0 0 0 0 HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
a0001c0001t0058g0007 0/0 1 0 1 0 0 0 HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
a0001c0001t0059g0001 0/0 1 1 0 0 0 0 HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
a0001c0001t0060g0001 0/0 1 1 0 0 0 0 HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
a0001c0007t0026g0001 0/0 1 0 1 0 0 0 HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
a0002c0002t0007g0001 0/0 1 0 1 0 0 0 HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
a0002c0002t0017g0001 0/0 1 1 0 0 0 0 HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
a0002c0002t0030g0001 0/0 1 0 1 0 0 0 HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
a0003c0005t0009g0001 0/0 1 0 0 0 0 1 HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
a0004c0004t0020g0001 0/0 1 1 0 0 0 0 HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
a0005c0003t0020g0001 0/0 1 1 0 0 0 0 HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
a0006c0006t0049g0009 0/0 1 0 0 1 0 0 HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769

sampleid ID
haplotypeid
 ahapid chapid thapid ghapid gpopname popname regionname genename chr start end
HG00099 hp1 a0001 c0001 t0001 g0001 EUR GBR HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
HG00099 hp2 a0001 c0001 t0014 g0001 EUR GBR HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
HG00140 hp1 a0001 c0001 t0007 g0001 EUR GBR HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
HG00140 hp2 a0001 c0001 t0036 g0001 EUR GBR HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
HG00323 hp1 a0001 c0001 t0007 g0001 EUR FIN HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
HG00323 hp2 a0001 c0001 t0004 g0001 EUR FIN HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
HG00408 hp1 a0001 c0001 t0004 g0001 EAS CHS HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
HG00408 hp2 a0001 c0001 t0009 g0001 EAS CHS HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
HG00423 hp1 a0001 c0001 t0001 g0004 EAS CHS HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
HG00423 hp2 a0001 c0001 t0011 g0001 EAS CHS HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
HG00558 hp1 a0001 c0001 t0001 g0001 EAS CHS HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
HG00558 hp2 a0001 c0001 t0001 g0001 EAS CHS HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
HG00597 hp1 a0001 c0001 t0003 g0001 EAS CHS HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
HG00597 hp2 a0001 c0001 t0045 g0001 EAS CHS HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
HG00609 hp1 a0001 c0001 t0005 g0001 EAS CHS HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
HG00609 hp2 a0001 c0001 t0001 g0001 EAS CHS HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
HG00621 hp1 a0001 c0001 t0010 g0001 EAS CHS HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
HG00621 hp2 a0001 c0001 t0023 g0001 EAS CHS HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
HG00639 hp1 a0001 c0001 t0003 g0001 AMR PUR HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
HG00639 hp2 a0001 c0001 t0003 g0001 AMR PUR HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
HG00642 hp1 a0001 c0001 t0040 g0001 AMR PUR HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
HG00642 hp2 a0001 c0001 t0010 g0001 AMR PUR HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
HG00673 hp1 a0001 c0001 t0001 g0001 EAS CHS HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
HG00673 hp2 a0001 c0001 t0006 g0001 EAS CHS HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
HG00733 hp1 a0001 c0001 t0003 g0001 AMR PUR HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
HG00733 hp2 a0001 c0001 t0002 g0002 AMR PUR HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
HG00735 hp1 a0001 c0001 t0042 g0001 AMR PUR HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
HG00735 hp2 a0001 c0001 t0014 g0001 AMR PUR HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
HG00738 hp1 a0001 c0001 t0001 g0001 AMR PUR HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
HG00738 hp2 a0001 c0001 t0016 g0001 AMR PUR HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
HG00741 hp1 a0001 c0001 t0052 g0001 AMR PUR HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
HG00741 hp2 a0001 c0001 t0001 g0001 AMR PUR HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
HG01069 hp1 a0001 c0001 t0002 g0001 AMR PUR HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
HG01069 hp2 a0001 c0001 t0007 g0001 AMR PUR HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
HG01071 hp1 a0001 c0001 t0001 g0001 AMR PUR HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
HG01071 hp2 a0001 c0001 t0002 g0001 AMR PUR HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
HG01074 hp1 a0001 c0001 t0003 g0001 AMR PUR HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
HG01074 hp2 a0001 c0001 t0003 g0001 AMR PUR HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
HG01081 hp1 a0001 c0001 t0002 g0001 AMR PUR HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
HG01081 hp2 a0001 c0001 t0003 g0001 AMR PUR HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
HG01099 hp1 a0001 c0001 t0003 g0001 AMR PUR HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
HG01099 hp2 a0001 c0001 t0002 g0001 AMR PUR HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
HG01106 hp1 a0001 c0001 t0007 g0001 AMR PUR HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
HG01106 hp2 a0001 c0001 t0013 g0001 AMR PUR HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
HG01109 hp1 a0001 c0001 t0015 g0001 AMR PUR HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
HG01109 hp2 a0001 c0001 t0001 g0001 AMR PUR HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
HG01167 hp1 a0001 c0001 t0001 g0001 AMR PUR HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
HG01167 hp2 a0001 c0001 t0002 g0001 AMR PUR HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
HG01192 hp1 a0001 c0001 t0003 g0001 AMR PUR HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
HG01192 hp2 a0001 c0001 t0001 g0001 AMR PUR HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
HG01243 hp1 a0001 c0001 t0001 g0001 AMR PUR HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
HG01243 hp2 a0001 c0001 t0058 g0007 AMR PUR HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
HG01255 hp1 a0001 c0001 t0002 g0001 AMR CLM HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
HG01255 hp2 a0001 c0001 t0031 g0001 AMR CLM HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
HG01258 hp1 a0001 c0001 t0007 g0001 AMR CLM HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
HG01258 hp2 a0001 c0001 t0003 g0001 AMR CLM HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
HG01346 hp1 a0001 c0001 t0003 g0001 AMR CLM HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
HG01346 hp2 a0001 c0001 t0001 g0001 AMR CLM HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
HG01358 hp1 a0001 c0001 t0002 g0001 AMR CLM HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
HG01358 hp2 a0001 c0001 t0001 g0001 AMR CLM HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
HG01361 hp1 a0001 c0001 t0003 g0001 AMR CLM HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
HG01361 hp2 a0001 c0001 t0002 g0001 AMR CLM HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
HG01496 hp1 a0001 c0001 t0050 g0001 AMR CLM HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
HG01496 hp2 a0001 c0001 t0003 g0001 AMR CLM HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
HG01516 hp1 a0001 c0001 t0003 g0001 EUR IBS HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
HG01516 hp2 a0001 c0001 t0003 g0001 EUR IBS HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
HG01517 hp1 a0001 c0001 t0003 g0001 EUR IBS HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
HG01517 hp2 a0001 c0001 t0043 g0001 EUR IBS HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
HG01884 hp1 a0001 c0001 t0054 g0006 AFR ACB HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
HG01884 hp2 a0001 c0001 t0009 g0001 AFR ACB HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
HG01934 hp1 a0001 c0001 t0002 g0001 AMR PEL HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
HG01934 hp2 a0002 c0002 t0030 g0001 AMR PEL HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
HG01943 hp1 a0001 c0001 t0004 g0001 AMR PEL HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
HG01943 hp2 a0002 c0002 t0007 g0001 AMR PEL HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
HG01975 hp1 a0001 c0001 t0001 g0001 AMR PEL HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
HG01975 hp2 a0001 c0001 t0014 g0001 AMR PEL HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
HG01978 hp1 a0001 c0001 t0017 g0001 AMR PEL HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
HG01978 hp2 a0001 c0001 t0003 g0001 AMR PEL HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
HG01981 hp1 a0001 c0001 t0010 g0001 AMR PEL HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
HG01981 hp2 a0001 c0001 t0006 g0001 AMR PEL HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
HG01993 hp1 a0001 c0001 t0002 g0001 AMR PEL HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
HG01993 hp2 a0001 c0007 t0026 g0001 AMR PEL HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
HG02040 hp1 a0001 c0001 t0002 g0001 EAS KHV HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
HG02040 hp2 a0001 c0001 t0001 g0001 EAS KHV HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
HG02055 hp1 a0001 c0001 t0044 g0001 AFR ACB HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
HG02055 hp2 a0001 c0001 t0002 g0001 AFR ACB HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
HG02074 hp1 a0001 c0001 t0001 g0001 EAS KHV HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
HG02074 hp2 a0001 c0001 t0002 g0001 EAS KHV HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
HG02080 hp1 a0001 c0001 t0021 g0001 EAS KHV HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
HG02080 hp2 a0001 c0001 t0002 g0001 EAS KHV HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
HG02083 hp1 a0001 c0001 t0005 g0001 EAS KHV HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
HG02083 hp2 a0001 c0001 t0002 g0001 EAS KHV HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
HG02129 hp1 a0001 c0001 t0001 g0001 EAS KHV HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
HG02129 hp2 a0001 c0001 t0001 g0001 EAS KHV HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
HG02135 hp1 a0001 c0001 t0012 g0001 EAS KHV HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
HG02135 hp2 a0001 c0001 t0018 g0001 EAS KHV HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
HG02145 hp1 a0001 c0001 t0016 g0001 AFR ACB HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
HG02145 hp2 a0001 c0001 t0012 g0001 AFR ACB HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
HG02165 hp1 a0001 c0001 t0008 g0001 EAS CDX HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
HG02165 hp2 a0001 c0001 t0005 g0001 EAS CDX HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
HG02257 hp1 a0001 c0001 t0006 g0001 AFR ACB HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
HG02257 hp2 a0001 c0001 t0006 g0001 AFR ACB HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
HG02258 hp1 a0001 c0001 t0025 g0001 AFR ACB HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
HG02258 hp2 a0001 c0001 t0001 g0001 AFR ACB HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
HG02280 hp1 a0001 c0001 t0017 g0001 AFR ACB HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
HG02280 hp2 a0001 c0001 t0051 g0001 AFR ACB HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
HG02451 hp1 a0001 c0001 t0002 g0001 AFR ACB HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
HG02451 hp2 a0001 c0001 t0025 g0001 AFR ACB HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
HG02523 hp1 a0001 c0001 t0001 g0001 EAS KHV HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
HG02523 hp2 a0001 c0001 t0001 g0001 EAS KHV HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
HG02572 hp1 a0001 c0001 t0028 g0001 AFR GWD HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
HG02572 hp2 a0001 c0001 t0002 g0001 AFR GWD HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
HG02622 hp1 a0001 c0001 t0002 g0001 AFR GWD HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
HG02622 hp2 a0001 c0001 t0002 g0001 AFR GWD HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
HG02630 hp1 a0001 c0001 t0005 g0001 AFR GWD HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
HG02630 hp2 a0001 c0001 t0002 g0001 AFR GWD HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
HG02647 hp1 a0005 c0003 t0020 g0001 AFR GWD HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
HG02647 hp2 a0001 c0001 t0012 g0001 AFR GWD HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
HG02683 hp1 a0001 c0001 t0001 g0001 SAS PJL HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
HG02683 hp2 a0001 c0001 t0002 g0002 SAS PJL HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
HG02698 hp1 a0001 c0001 t0001 g0001 SAS PJL HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
HG02698 hp2 a0001 c0001 t0001 g0001 SAS PJL HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
HG02717 hp1 a0004 c0004 t0020 g0001 AFR GWD HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
HG02717 hp2 a0001 c0001 t0024 g0001 AFR GWD HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
HG02723 hp1 a0001 c0001 t0001 g0001 AFR GWD HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
HG02723 hp2 a0001 c0001 t0002 g0001 AFR GWD HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
HG02735 hp1 a0003 c0005 t0009 g0001 SAS PJL HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
HG02735 hp2 a0001 c0001 t0009 g0001 SAS PJL HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
HG02809 hp1 a0001 c0001 t0002 g0001 AFR GWD HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
HG02809 hp2 a0001 c0001 t0002 g0001 AFR GWD HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
HG02886 hp1 a0001 c0001 t0016 g0001 AFR GWD HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
HG02886 hp2 a0001 c0001 t0001 g0001 AFR GWD HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
HG02895 hp1 a0001 c0001 t0019 g0001 AFR GWD HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
HG02895 hp2 a0001 c0001 t0019 g0001 AFR GWD HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
HG02897 hp1 a0001 c0001 t0002 g0001 AFR GWD HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
HG02897 hp2 a0001 c0001 t0059 g0001 AFR GWD HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
HG02922 hp1 a0001 c0001 t0041 g0001 AFR ESN HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
HG02922 hp2 a0001 c0001 t0003 g0001 AFR ESN HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
HG02965 hp1 a0001 c0001 t0015 g0001 AFR ESN HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
HG02965 hp2 a0001 c0001 t0060 g0001 AFR ESN HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
HG02970 hp1 a0001 c0001 t0001 g0001 AFR ESN HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
HG02970 hp2 a0001 c0001 t0009 g0001 AFR ESN HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
HG02976 hp1 a0001 c0001 t0015 g0001 AFR ESN HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
HG02976 hp2 a0001 c0001 t0002 g0001 AFR ESN HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
HG03041 hp1 a0001 c0001 t0002 g0001 AFR GWD HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
HG03041 hp2 a0001 c0001 t0001 g0008 AFR GWD HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
HG03098 hp1 a0001 c0001 t0008 g0001 AFR MSL HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
HG03098 hp2 a0001 c0001 t0026 g0001 AFR MSL HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
HG03130 hp1 a0001 c0001 t0002 g0001 AFR ESN HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
HG03130 hp2 a0001 c0001 t0002 g0001 AFR ESN HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
HG03209 hp1 a0001 c0001 t0020 g0001 AFR MSL HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
HG03209 hp2 a0001 c0001 t0057 g0001 AFR MSL HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
HG03225 hp1 a0001 c0001 t0015 g0001 AFR MSL HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
HG03225 hp2 a0001 c0001 t0039 g0001 AFR MSL HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
HG03239 hp1 a0001 c0001 t0002 g0001 SAS PJL HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
HG03239 hp2 a0001 c0001 t0002 g0001 SAS PJL HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
HG03486 hp1 a0001 c0001 t0029 g0001 AFR MSL HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
HG03486 hp2 a0001 c0001 t0012 g0001 AFR MSL HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
HG03490 hp1 a0001 c0001 t0047 g0001 SAS PJL HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
HG03490 hp2 a0001 c0001 t0001 g0001 SAS PJL HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
HG03492 hp1 a0001 c0001 t0001 g0001 SAS PJL HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
HG03492 hp2 a0001 c0001 t0001 g0001 SAS PJL HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
HG03516 hp1 a0001 c0001 t0001 g0001 AFR ESN HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
HG03516 hp2 a0001 c0001 t0002 g0001 AFR ESN HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
HG03540 hp1 a0001 c0001 t0012 g0001 AFR GWD HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
HG03540 hp2 a0001 c0001 t0002 g0001 AFR GWD HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
HG03579 hp1 a0001 c0001 t0008 g0001 AFR MSL HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
HG03579 hp2 a0001 c0001 t0008 g0001 AFR MSL HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
HG03654 hp1 a0001 c0001 t0053 g0001 SAS PJL HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
HG03654 hp2 a0001 c0001 t0008 g0001 SAS PJL HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
HG03669 hp1 a0001 c0001 t0048 g0001 SAS PJL HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
HG03669 hp2 a0001 c0001 t0001 g0001 SAS PJL HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
HG03704 hp1 a0001 c0001 t0027 g0001 SAS PJL HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
HG03704 hp2 a0001 c0001 t0027 g0001 SAS PJL HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
HG03710 hp1 a0001 c0001 t0001 g0001 SAS PJL HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
HG03710 hp2 a0001 c0001 t0008 g0001 SAS PJL HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
HG03834 hp1 a0001 c0001 t0001 g0001 SAS BEB HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
HG03834 hp2 a0001 c0001 t0003 g0001 SAS BEB HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
HG03927 hp1 a0001 c0001 t0037 g0003 SAS BEB HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
HG03927 hp2 a0001 c0001 t0002 g0001 SAS BEB HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
HG04199 hp1 a0001 c0001 t0001 g0001 SAS STU HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
HG04199 hp2 a0001 c0001 t0055 g0001 SAS STU HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
NA18522 hp1 a0001 c0001 t0006 g0001 AFR YRI HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
NA18522 hp2 a0001 c0001 t0019 g0001 AFR YRI HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
NA18612 hp1 a0001 c0001 t0001 g0001 EAS CHB HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
NA18612 hp2 a0001 c0001 t0003 g0001 EAS CHB HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
NA18747 hp1 a0001 c0001 t0001 g0001 EAS CHB HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
NA18747 hp2 a0001 c0001 t0001 g0001 EAS CHB HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
NA18906 hp1 a0001 c0001 t0016 g0001 AFR YRI HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
NA18906 hp2 a0001 c0001 t0002 g0001 AFR YRI HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
NA18944 hp1 a0001 c0001 t0004 g0001 EAS JPT HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
NA18944 hp2 a0001 c0001 t0001 g0001 EAS JPT HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
NA18945 hp1 a0001 c0001 t0001 g0001 EAS JPT HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
NA18945 hp2 a0001 c0001 t0001 g0001 EAS JPT HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
NA18947 hp1 a0001 c0001 t0006 g0001 EAS JPT HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
NA18947 hp2 a0001 c0001 t0004 g0001 EAS JPT HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
NA18948 hp1 a0001 c0001 t0011 g0001 EAS JPT HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
NA18948 hp2 a0001 c0001 t0001 g0001 EAS JPT HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
NA18949 hp1 a0001 c0001 t0002 g0001 EAS JPT HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
NA18949 hp2 a0001 c0001 t0005 g0001 EAS JPT HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
NA18951 hp1 a0001 c0001 t0001 g0001 EAS JPT HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
NA18951 hp2 a0001 c0001 t0033 g0001 EAS JPT HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
NA18952 hp1 a0001 c0001 t0005 g0001 EAS JPT HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
NA18952 hp2 a0001 c0001 t0005 g0005 EAS JPT HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
NA18954 hp1 a0001 c0001 t0004 g0001 EAS JPT HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
NA18954 hp2 a0001 c0001 t0004 g0001 EAS JPT HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
NA18959 hp1 a0001 c0001 t0003 g0001 EAS JPT HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
NA18959 hp2 a0001 c0001 t0001 g0001 EAS JPT HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
NA18960 hp1 a0001 c0001 t0011 g0001 EAS JPT HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
NA18960 hp2 a0001 c0001 t0007 g0001 EAS JPT HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
NA18962 hp1 a0006 c0006 t0049 g0009 EAS JPT HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
NA18962 hp2 a0001 c0001 t0001 g0001 EAS JPT HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
NA18964 hp1 a0001 c0001 t0001 g0001 EAS JPT HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
NA18964 hp2 a0001 c0001 t0004 g0001 EAS JPT HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
NA18966 hp1 a0001 c0001 t0002 g0001 EAS JPT HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
NA18966 hp2 a0001 c0001 t0001 g0001 EAS JPT HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
NA18967 hp1 a0001 c0001 t0009 g0001 EAS JPT HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
NA18967 hp2 a0001 c0001 t0011 g0001 EAS JPT HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
NA18969 hp1 a0001 c0001 t0022 g0001 EAS JPT HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
NA18969 hp2 a0001 c0001 t0003 g0001 EAS JPT HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
NA18970 hp1 a0001 c0001 t0001 g0001 EAS JPT HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
NA18970 hp2 a0001 c0001 t0003 g0001 EAS JPT HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
NA18971 hp1 a0001 c0001 t0001 g0001 EAS JPT HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
NA18971 hp2 a0001 c0001 t0001 g0001 EAS JPT HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
NA18973 hp1 a0001 c0001 t0003 g0001 EAS JPT HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
NA18973 hp2 a0001 c0001 t0001 g0001 EAS JPT HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
NA18975 hp1 a0001 c0001 t0006 g0001 EAS JPT HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
NA18975 hp2 a0001 c0001 t0013 g0001 EAS JPT HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
NA18980 hp1 a0001 c0001 t0001 g0001 EAS JPT HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
NA18980 hp2 a0001 c0001 t0034 g0001 EAS JPT HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
NA18983 hp1 a0001 c0001 t0003 g0001 EAS JPT HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
NA18983 hp2 a0001 c0001 t0001 g0001 EAS JPT HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
NA18984 hp1 a0001 c0001 t0003 g0001 EAS JPT HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
NA18984 hp2 a0001 c0001 t0001 g0001 EAS JPT HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
NA18991 hp1 a0001 c0001 t0004 g0001 EAS JPT HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
NA18991 hp2 a0001 c0001 t0013 g0001 EAS JPT HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
NA18995 hp1 a0001 c0001 t0003 g0001 EAS JPT HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
NA18995 hp2 a0001 c0001 t0010 g0001 EAS JPT HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
NA18999 hp1 a0001 c0001 t0001 g0001 EAS JPT HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
NA18999 hp2 a0001 c0001 t0001 g0001 EAS JPT HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
NA19000 hp1 a0001 c0001 t0006 g0001 EAS JPT HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
NA19000 hp2 a0001 c0001 t0010 g0001 EAS JPT HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
NA19003 hp1 a0001 c0001 t0002 g0001 EAS JPT HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
NA19003 hp2 a0001 c0001 t0004 g0001 EAS JPT HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
NA19004 hp1 a0001 c0001 t0002 g0001 EAS JPT HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
NA19004 hp2 a0001 c0001 t0001 g0001 EAS JPT HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
NA19005 hp1 a0001 c0001 t0002 g0001 EAS JPT HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
NA19005 hp2 a0001 c0001 t0002 g0001 EAS JPT HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
NA19009 hp1 a0001 c0001 t0021 g0001 EAS JPT HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
NA19009 hp2 a0001 c0001 t0002 g0001 EAS JPT HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
NA19010 hp1 a0001 c0001 t0006 g0001 EAS JPT HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
NA19010 hp2 a0001 c0001 t0003 g0001 EAS JPT HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
NA19012 hp1 a0001 c0001 t0023 g0001 EAS JPT HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
NA19012 hp2 a0001 c0001 t0004 g0001 EAS JPT HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
NA19043 hp1 a0001 c0001 t0005 g0001 AFR LWK HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
NA19043 hp2 a0001 c0001 t0007 g0001 AFR LWK HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
NA19055 hp1 a0001 c0001 t0006 g0001 EAS JPT HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
NA19055 hp2 a0001 c0001 t0003 g0001 EAS JPT HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
NA19060 hp1 a0001 c0001 t0008 g0001 EAS JPT HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
NA19060 hp2 a0001 c0001 t0046 g0001 EAS JPT HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
NA19068 hp1 a0001 c0001 t0001 g0001 EAS JPT HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
NA19068 hp2 a0001 c0001 t0003 g0001 EAS JPT HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
NA19070 hp1 a0001 c0001 t0001 g0001 EAS JPT HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
NA19070 hp2 a0001 c0001 t0011 g0001 EAS JPT HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
NA19074 hp1 a0001 c0001 t0005 g0001 EAS JPT HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
NA19074 hp2 a0001 c0001 t0032 g0001 EAS JPT HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
NA19077 hp1 a0001 c0001 t0001 g0001 EAS JPT HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
NA19077 hp2 a0001 c0001 t0008 g0001 EAS JPT HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
NA19079 hp1 a0001 c0001 t0001 g0001 EAS JPT HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
NA19079 hp2 a0001 c0001 t0004 g0001 EAS JPT HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
NA19080 hp1 a0001 c0001 t0004 g0001 EAS JPT HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
NA19080 hp2 a0001 c0001 t0006 g0001 EAS JPT HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
NA19081 hp1 a0001 c0001 t0018 g0001 EAS JPT HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
NA19081 hp2 a0001 c0001 t0005 g0001 EAS JPT HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
NA19083 hp1 a0001 c0001 t0013 g0001 EAS JPT HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
NA19083 hp2 a0001 c0001 t0010 g0001 EAS JPT HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
NA19085 hp1 a0001 c0001 t0002 g0001 EAS JPT HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
NA19085 hp2 a0001 c0001 t0001 g0001 EAS JPT HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
NA19090 hp1 a0001 c0001 t0009 g0001 EAS JPT HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
NA19090 hp2 a0001 c0001 t0008 g0001 EAS JPT HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
NA19091 hp1 a0001 c0001 t0035 g0001 EAS JPT HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
NA19091 hp2 a0001 c0001 t0005 g0001 EAS JPT HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
NA19240 hp1 a0001 c0001 t0002 g0001 AFR YRI HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
NA19240 hp2 a0001 c0001 t0038 g0001 AFR YRI HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
NA20129 hp1 a0001 c0001 t0002 g0001 AFR ASW HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
NA20129 hp2 a0001 c0001 t0005 g0001 AFR ASW HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
NA20752 hp1 a0001 c0001 t0007 g0001 EUR TSI HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
NA20752 hp2 a0001 c0001 t0007 g0001 EUR TSI HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
NA20805 hp1 a0001 c0001 t0018 g0001 EUR TSI HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
NA20805 hp2 a0001 c0001 t0003 g0001 EUR TSI HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
NA20905 hp1 a0001 c0001 t0001 g0001 SAS GIH HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
NA20905 hp2 a0001 c0001 t0002 g0001 SAS GIH HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
HG01123 hp1 a0001 c0001 t0014 g0001 AMR CLM HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
HG01123 hp2 a0001 c0001 t0001 g0001 AMR CLM HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
HG02109 hp1 a0001 c0001 t0028 g0001 AFR ACB HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
HG02109 hp2 a0001 c0001 t0006 g0001 AFR ACB HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
HG02559 hp1 a0001 c0001 t0001 g0001 AFR ACB HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
HG02559 hp2 a0001 c0001 t0024 g0001 AFR ACB HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
NA18955 hp1 a0001 c0001 t0005 g0001 EAS JPT HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
NA18955 hp2 a0001 c0001 t0001 g0001 EAS JPT HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
NA20300 hp1 a0002 c0002 t0017 g0001 AFR USA HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
NA20300 hp2 a0001 c0001 t0003 g0001 AFR USA HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
NA21309 hp1 a0001 c0001 t0001 g0001 AFR LWK HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
NA21309 hp2 a0001 c0001 t0056 g0001 AFR LWK HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
homoSapiens_chm13v2 hp1 a0001 c0001 t0022 g0001 REF REF HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769
homoSapiens_grch38 hp1 a0001 c0001 t0002 g0001 REF REF HOXC8_chr12_54003985_54017769 HOXC8 chr12 54003985 54017769

chr:pos ref alt #
# of ahapid:amino-acid(protein) level
 ahapids #
# of haplotypeids
 haplotypeids annotation impact hgvs_c hgvs_p genename geneid featuretype featureid transcript_biotype rank cdna
cdna pos length
 cds
cds pos length
 aa
aa pos length
 distance status chr pos
chr12:54009526 G
G
 T
T
 1 a0006
a0006
 1 NA18962.hp1
NA18962.hp1
 missense_variant MODERATE c.242G>T
c.242G>T
 p.Cys81Phe
p.Cys81Phe
 HOXC8 ENSG00000037965.6 transcript ENST00000040584.6 protein_coding 1/2 542/2417 242/729 81/242 chr12 54009526
chr12:54009528 CACGGAGA
others(8): Show 
CACGGAGACGCCTCCA
 C
C
 1 a0005
a0005
 1 HG02647.hp1
HG02647.hp1
 disruptive_inframe_deletion MODERATE c.246_260delCGGAGACG
others(7): Show 
c.246_260delCGGAGACGCCTCCAA
 p.His82_Lys87delinsG
others(2): Show 
p.His82_Lys87delinsGln
 HOXC8 ENSG00000037965.6 transcript ENST00000040584.6 protein_coding 1/2 546/2417 246/729 82/242 INFO_REALIGN_3_PRIME chr12 54009528
chr12:54009536 C
C
 A
A
 1 a0004
a0004
 1 HG02717.hp1
HG02717.hp1
 missense_variant MODERATE c.252C>A
c.252C>A
 p.Asp84Glu
p.Asp84Glu
 HOXC8 ENSG00000037965.6 transcript ENST00000040584.6 protein_coding 1/2 552/2417 252/729 84/242 chr12 54009536
chr12:54009600 G
G
 T
T
 1 a0002
a0002
 3 HG01934.hp2
HG01943.hp2
NA20300.hp1
HG01934.hp2
HG01943.hp2
NA20300.hp1
 missense_variant MODERATE c.316G>T
c.316G>T
 p.Ala106Ser
p.Ala106Ser
 HOXC8 ENSG00000037965.6 transcript ENST00000040584.6 protein_coding 1/2 616/2417 316/729 106/242 chr12 54009600
chr12:54009605 C
C
 A
A
 1 a0003
a0003
 1 HG02735.hp1
HG02735.hp1
 missense_variant MODERATE c.321C>A
c.321C>A
 p.Ser107Arg
p.Ser107Arg
 HOXC8 ENSG00000037965.6 transcript ENST00000040584.6 protein_coding 1/2 621/2417 321/729 107/242 chr12 54009605
chr12:54009636 G
G
 C
C
 1 a0006
a0006
 1 NA18962.hp1
NA18962.hp1
 missense_variant MODERATE c.352G>C
c.352G>C
 p.Ala118Pro
p.Ala118Pro
 HOXC8 ENSG00000037965.6 transcript ENST00000040584.6 protein_coding 1/2 652/2417 352/729 118/242 chr12 54009636
chr12:54009637 C
C
 A
A
 1 a0006
a0006
 1 NA18962.hp1
NA18962.hp1
 missense_variant MODERATE c.353C>A
c.353C>A
 p.Ala118Asp
p.Ala118Asp
 HOXC8 ENSG00000037965.6 transcript ENST00000040584.6 protein_coding 1/2 653/2417 353/729 118/242 chr12 54009637
chr12:54011346 A
A
 T
T
 1 a0006
a0006
 1 NA18962.hp1
NA18962.hp1
 stop_gained HIGH c.694A>T
c.694A>T
 p.Lys232*
p.Lys232*
 HOXC8 ENSG00000037965.6 transcript ENST00000040584.6 protein_coding 2/2 994/2417 694/729 232/242 chr12 54011346
chr12:54011349 G
G
 A
A
 1 a0006
a0006
 1 NA18962.hp1
NA18962.hp1
 missense_variant MODERATE c.697G>A
c.697G>A
 p.Glu233Lys
p.Glu233Lys
 HOXC8 ENSG00000037965.6 transcript ENST00000040584.6 protein_coding 2/2 997/2417 697/729 233/242 chr12 54011349
chr12:54011350 A
A
 G
G
 1 a0006
a0006
 1 NA18962.hp1
NA18962.hp1
 missense_variant MODERATE c.698A>G
c.698A>G
 p.Glu233Gly
p.Glu233Gly
 HOXC8 ENSG00000037965.6 transcript ENST00000040584.6 protein_coding 2/2 998/2417 698/729 233/242 chr12 54011350

chr:pos ref alt #
# of chapid
 chapids #
# of haplotypeids
 haplotypeids annotation impact hgvs_c hgvs_p genename geneid featuretype featureid transcript_biotype rank cdna
cdna pos length
 cds
cds pos length
 aa
aa pos length
 distance status chr pos
chr12:54009425 C
C
 T
T
 1 a0001c0007
a0001c0007
 1 HG01993.hp2
HG01993.hp2
 synonymous_variant LOW c.141C>T
c.141C>T
 p.Pro47Pro
p.Pro47Pro
 HOXC8 ENSG00000037965.6 transcript ENST00000040584.6 protein_coding 1/2 441/2417 141/729 47/242 chr12 54009425
chr12:54009635 C
C
 G
G
 1 a0006c0006
a0006c0006
 1 NA18962.hp1
NA18962.hp1
 synonymous_variant LOW c.351C>G
c.351C>G
 p.Ser117Ser
p.Ser117Ser
 HOXC8 ENSG00000037965.6 transcript ENST00000040584.6 protein_coding 1/2 651/2417 351/729 117/242 chr12 54009635

chr:pos ref alt #
# of thapid:transcript level
 thapids #
# of haplotypeids
 haplotypeids annotation impact hgvs_c hgvs_p genename geneid featuretype featureid transcript_biotype rank cdna
cdna pos length
 cds
cds pos length
 aa
aa pos length
 distance status chr pos
chr12:54009024 GCGC
GCGC
 G
G
 28 a0001c0001t0001
a0001c0001t0006
a0001c0001t0007
others(25): Show 
a0001c0001t0001
a0001c0001t0006
a0001c0001t0007
a0001c0001t0009
a0001c0001t0011
a0001c0001t0017
a0001c0001t0021
a0001c0001t0022
a0001c0001t0023
a0001c0001t0024
a0001c0001t0025
a0001c0001t0031
a0001c0001t0032
a0001c0001t0033
a0001c0001t0034
a0001c0001t0035
a0001c0001t0036
a0001c0001t0037
a0001c0001t0038
a0001c0001t0039
a0001c0001t0040
a0001c0001t0041
a0001c0001t0042
a0001c0001t0043
a0002c0002t0007
a0002c0002t0017
a0002c0002t0030
a0003c0005t0009
 131 HG00099.hp1
HG00140.hp1
HG00140.hp2
others(128): Show 
HG00099.hp1
HG00140.hp1
HG00140.hp2
HG00323.hp1
HG00408.hp2
HG00423.hp1
HG00423.hp2
HG00558.hp1
HG00558.hp2
HG00609.hp2
HG00621.hp2
HG00642.hp1
HG00673.hp1
HG00673.hp2
HG00735.hp1
HG00738.hp1
HG00741.hp2
HG01069.hp2
HG01071.hp1
HG01106.hp1
HG01109.hp2
HG01123.hp2
HG01167.hp1
HG01192.hp2
HG01243.hp1
HG01255.hp2
HG01258.hp1
HG01346.hp2
HG01358.hp2
HG01517.hp2
HG01884.hp2
HG01934.hp2
HG01943.hp2
HG01975.hp1
HG01978.hp1
HG01981.hp2
HG02040.hp2
HG02074.hp1
HG02080.hp1
HG02109.hp2
HG02129.hp1
HG02129.hp2
HG02257.hp1
HG02257.hp2
HG02258.hp1
HG02258.hp2
HG02280.hp1
HG02451.hp2
HG02523.hp1
HG02523.hp2
HG02559.hp1
HG02559.hp2
HG02683.hp1
HG02698.hp1
HG02698.hp2
HG02717.hp2
HG02723.hp1
HG02735.hp1
HG02735.hp2
HG02886.hp2
HG02922.hp1
HG02970.hp1
HG02970.hp2
HG03041.hp2
HG03225.hp2
HG03490.hp2
HG03492.hp1
HG03492.hp2
HG03516.hp1
HG03669.hp2
HG03710.hp1
HG03834.hp1
HG03927.hp1
HG04199.hp1
NA18522.hp1
NA18612.hp1
NA18747.hp1
NA18747.hp2
NA18944.hp2
NA18945.hp1
NA18945.hp2
NA18947.hp1
NA18948.hp1
NA18948.hp2
NA18951.hp1
NA18951.hp2
NA18955.hp2
NA18959.hp2
NA18960.hp1
NA18960.hp2
NA18962.hp2
NA18964.hp1
NA18966.hp2
NA18967.hp1
NA18967.hp2
NA18969.hp1
NA18970.hp1
NA18971.hp1
NA18971.hp2
NA18973.hp2
NA18975.hp1
NA18980.hp1
NA18980.hp2
NA18983.hp2
NA18984.hp2
NA18999.hp1
NA18999.hp2
NA19000.hp1
NA19004.hp2
NA19009.hp1
NA19010.hp1
NA19012.hp1
NA19043.hp2
NA19055.hp1
NA19068.hp1
NA19070.hp1
NA19070.hp2
NA19074.hp2
NA19077.hp1
NA19079.hp1
NA19080.hp2
NA19085.hp2
NA19090.hp1
NA19091.hp1
NA19240.hp2
NA20300.hp1
NA20752.hp1
NA20752.hp2
NA20905.hp1
NA21309.hp1
homoSapiens_chm13v2.hp1
 5_prime_UTR_variant MODIFIER c.-241_-239delGCC
c.-241_-239delGCC
HOXC8 ENSG00000037965.6 transcript ENST00000040584.6 protein_coding 1/2 239 INFO_REALIGN_3_PRIME chr12 54009024
chr12:54009029 G
G
 GCCGCCGC
others(17): Show 
GCCGCCGCCGCCGCCCGCTCGCCGC
 1 a0001c0001t0044
a0001c0001t0044
 1 HG02055.hp1
HG02055.hp1
 5_prime_UTR_variant MODIFIER c.-242_-241insCGCTCG
others(18): Show 
c.-242_-241insCGCTCGCCGCCCGCCGCCGCCGCC
HOXC8 ENSG00000037965.6 transcript ENST00000040584.6 protein_coding 1/2 241 INFO_REALIGN_3_PRIME chr12 54009029
chr12:54009034 C
C
 A
A
 1 a0001c0001t0029
a0001c0001t0029
 1 HG03486.hp1
HG03486.hp1
 5_prime_UTR_variant MODIFIER c.-251C>A
c.-251C>A
HOXC8 ENSG00000037965.6 transcript ENST00000040584.6 protein_coding 1/2 251 chr12 54009034
chr12:54009206 G
G
 A
A
 1 a0001c0001t0021
a0001c0001t0021
 2 HG02080.hp1
NA19009.hp1
HG02080.hp1
NA19009.hp1
 5_prime_UTR_variant MODIFIER c.-79G>A
c.-79G>A
HOXC8 ENSG00000037965.6 transcript ENST00000040584.6 protein_coding 1/2 79 chr12 54009206
chr12:54011395 A
A
 AC
AC
 7 a0001c0001t0008
a0001c0001t0010
a0001c0001t0018
others(4): Show 
a0001c0001t0008
a0001c0001t0010
a0001c0001t0018
a0001c0001t0045
a0001c0001t0046
a0001c0001t0047
a0001c0001t0048
 22 HG00597.hp2
HG00621.hp1
HG00642.hp2
others(19): Show 
HG00597.hp2
HG00621.hp1
HG00642.hp2
HG01981.hp1
HG02135.hp2
HG02165.hp1
HG03098.hp1
HG03490.hp1
HG03579.hp1
HG03579.hp2
HG03654.hp2
HG03669.hp1
HG03710.hp2
NA18995.hp2
NA19000.hp2
NA19060.hp1
NA19060.hp2
NA19077.hp2
NA19081.hp1
NA19083.hp2
NA19090.hp2
NA20805.hp1
 3_prime_UTR_variant MODIFIER c.*25dupC
c.*25dupC
HOXC8 ENSG00000037965.6 transcript ENST00000040584.6 protein_coding 2/2 26 INFO_REALIGN_3_PRIME chr12 54011395
chr12:54011395 AC
AC
 A
A
 10 a0001c0001t0014
a0001c0001t0016
a0001c0001t0029
others(7): Show 
a0001c0001t0014
a0001c0001t0016
a0001c0001t0029
a0001c0001t0032
a0001c0001t0039
a0001c0001t0040
a0001c0001t0041
a0001c0001t0042
a0001c0001t0043
a0001c0001t0060
 16 HG00099.hp2
HG00642.hp1
HG00735.hp1
others(13): Show 
HG00099.hp2
HG00642.hp1
HG00735.hp1
HG00735.hp2
HG00738.hp2
HG01123.hp1
HG01517.hp2
HG01975.hp2
HG02145.hp1
HG02886.hp1
HG02922.hp1
HG02965.hp2
HG03225.hp2
HG03486.hp1
NA18906.hp1
NA19074.hp2
 3_prime_UTR_variant MODIFIER c.*25delC
c.*25delC
HOXC8 ENSG00000037965.6 transcript ENST00000040584.6 protein_coding 2/2 25 INFO_REALIGN_3_PRIME chr12 54011395
chr12:54011406 C
C
 CT
CT
 11 a0001c0001t0003
a0001c0001t0005
a0001c0001t0006
others(8): Show 
a0001c0001t0003
a0001c0001t0005
a0001c0001t0006
a0001c0001t0022
a0001c0001t0023
a0001c0001t0028
a0001c0001t0031
a0001c0001t0053
a0001c0001t0054
a0001c0001t0055
a0002c0002t0030
 68 HG00597.hp1
HG00609.hp1
HG00621.hp2
others(65): Show 
HG00597.hp1
HG00609.hp1
HG00621.hp2
HG00639.hp1
HG00639.hp2
HG00673.hp2
HG00733.hp1
HG01074.hp1
HG01074.hp2
HG01081.hp2
HG01099.hp1
HG01192.hp1
HG01255.hp2
HG01258.hp2
HG01346.hp1
HG01361.hp1
HG01496.hp2
HG01516.hp1
HG01516.hp2
HG01517.hp1
HG01884.hp1
HG01934.hp2
HG01978.hp2
HG01981.hp2
HG02083.hp1
HG02109.hp1
HG02109.hp2
HG02165.hp2
HG02257.hp1
HG02257.hp2
HG02572.hp1
HG02630.hp1
HG02922.hp2
HG03654.hp1
HG03834.hp2
HG04199.hp2
NA18522.hp1
NA18612.hp2
NA18947.hp1
NA18949.hp2
NA18952.hp1
NA18952.hp2
NA18955.hp1
NA18959.hp1
NA18969.hp1
NA18969.hp2
NA18970.hp2
NA18973.hp1
NA18975.hp1
NA18983.hp1
NA18984.hp1
NA18995.hp1
NA19000.hp1
NA19010.hp1
NA19010.hp2
NA19012.hp1
NA19043.hp1
NA19055.hp1
NA19055.hp2
NA19068.hp2
NA19074.hp1
NA19080.hp2
NA19081.hp2
NA19091.hp2
NA20129.hp2
NA20300.hp2
NA20805.hp2
homoSapiens_chm13v2.hp1
 3_prime_UTR_variant MODIFIER c.*27dupT
c.*27dupT
HOXC8 ENSG00000037965.6 transcript ENST00000040584.6 protein_coding 2/2 28 INFO_REALIGN_3_PRIME chr12 54011406
chr12:54011406 C
C
 T
T
 35 a0001c0001t0001
a0001c0001t0007
a0001c0001t0009
others(32): Show 
a0001c0001t0001
a0001c0001t0007
a0001c0001t0009
a0001c0001t0011
a0001c0001t0012
a0001c0001t0015
a0001c0001t0016
a0001c0001t0017
a0001c0001t0020
a0001c0001t0021
a0001c0001t0024
a0001c0001t0025
a0001c0001t0029
a0001c0001t0033
a0001c0001t0034
a0001c0001t0035
a0001c0001t0036
a0001c0001t0037
a0001c0001t0038
a0001c0001t0039
a0001c0001t0040
a0001c0001t0041
a0001c0001t0042
a0001c0001t0043
a0001c0001t0044
a0001c0001t0056
a0001c0001t0057
a0001c0001t0058
a0001c0001t0059
a0001c0001t0060
a0002c0002t0007
a0002c0002t0017
a0003c0005t0009
a0004c0004t0020
a0005c0003t0020
 135 HG00099.hp1
HG00140.hp1
HG00140.hp2
others(132): Show 
HG00099.hp1
HG00140.hp1
HG00140.hp2
HG00323.hp1
HG00408.hp2
HG00423.hp1
HG00423.hp2
HG00558.hp1
HG00558.hp2
HG00609.hp2
HG00642.hp1
HG00673.hp1
HG00735.hp1
HG00738.hp1
HG00738.hp2
HG00741.hp2
HG01069.hp2
HG01071.hp1
HG01106.hp1
HG01109.hp1
HG01109.hp2
HG01123.hp2
HG01167.hp1
HG01192.hp2
HG01243.hp1
HG01243.hp2
HG01258.hp1
HG01346.hp2
HG01358.hp2
HG01517.hp2
HG01884.hp2
HG01943.hp2
HG01975.hp1
HG01978.hp1
HG02040.hp2
HG02055.hp1
HG02074.hp1
HG02080.hp1
HG02129.hp1
HG02129.hp2
HG02135.hp1
HG02145.hp1
HG02145.hp2
HG02258.hp1
HG02258.hp2
HG02280.hp1
HG02451.hp2
HG02523.hp1
HG02523.hp2
HG02559.hp1
HG02559.hp2
HG02647.hp1
HG02647.hp2
HG02683.hp1
HG02698.hp1
HG02698.hp2
HG02717.hp1
HG02717.hp2
HG02723.hp1
HG02735.hp1
HG02735.hp2
HG02886.hp1
HG02886.hp2
HG02897.hp2
HG02922.hp1
HG02965.hp1
HG02965.hp2
HG02970.hp1
HG02970.hp2
HG02976.hp1
HG03041.hp2
HG03209.hp1
HG03209.hp2
HG03225.hp1
HG03225.hp2
HG03486.hp1
HG03486.hp2
HG03490.hp2
HG03492.hp1
HG03492.hp2
HG03516.hp1
HG03540.hp1
HG03669.hp2
HG03710.hp1
HG03834.hp1
HG03927.hp1
HG04199.hp1
NA18612.hp1
NA18747.hp1
NA18747.hp2
NA18906.hp1
NA18944.hp2
NA18945.hp1
NA18945.hp2
NA18948.hp1
NA18948.hp2
NA18951.hp1
NA18951.hp2
NA18955.hp2
NA18959.hp2
NA18960.hp1
NA18960.hp2
NA18962.hp2
NA18964.hp1
NA18966.hp2
NA18967.hp1
NA18967.hp2
NA18970.hp1
NA18971.hp1
NA18971.hp2
NA18973.hp2
NA18980.hp1
NA18980.hp2
NA18983.hp2
NA18984.hp2
NA18999.hp1
NA18999.hp2
NA19004.hp2
NA19009.hp1
NA19043.hp2
NA19068.hp1
NA19070.hp1
NA19070.hp2
NA19077.hp1
NA19079.hp1
NA19085.hp2
NA19090.hp1
NA19091.hp1
NA19240.hp2
NA20300.hp1
NA20752.hp1
NA20752.hp2
NA20905.hp1
NA21309.hp1
NA21309.hp2
 3_prime_UTR_variant MODIFIER c.*25C>T
c.*25C>T
HOXC8 ENSG00000037965.6 transcript ENST00000040584.6 protein_coding 2/2 25 chr12 54011406
chr12:54011449 T
T
 C
C
 1 a0001c0001t0028
a0001c0001t0028
 2 HG02109.hp1
HG02572.hp1
HG02109.hp1
HG02572.hp1
 3_prime_UTR_variant MODIFIER c.*68T>C
c.*68T>C
HOXC8 ENSG00000037965.6 transcript ENST00000040584.6 protein_coding 2/2 68 chr12 54011449
chr12:54011695 C
C
 T
T
 1 a0001c0001t0025
a0001c0001t0025
 2 HG02258.hp1
HG02451.hp2
HG02258.hp1
HG02451.hp2
 3_prime_UTR_variant MODIFIER c.*314C>T
c.*314C>T
HOXC8 ENSG00000037965.6 transcript ENST00000040584.6 protein_coding 2/2 314 chr12 54011695
chr12:54011805 T
T
 C
C
 1 a0001c0001t0056
a0001c0001t0056
 1 NA21309.hp2
NA21309.hp2
 3_prime_UTR_variant MODIFIER c.*424T>C
c.*424T>C
HOXC8 ENSG00000037965.6 transcript ENST00000040584.6 protein_coding 2/2 424 chr12 54011805
chr12:54011931 T
T
 G
G
 1 a0001c0001t0039
a0001c0001t0039
 1 HG03225.hp2
HG03225.hp2
 3_prime_UTR_variant MODIFIER c.*550T>G
c.*550T>G
HOXC8 ENSG00000037965.6 transcript ENST00000040584.6 protein_coding 2/2 550 chr12 54011931
chr12:54011942 T
T
 TC
TC
 17 a0001c0001t0017
a0001c0001t0018
a0001c0001t0026
others(14): Show 
a0001c0001t0017
a0001c0001t0018
a0001c0001t0026
a0001c0001t0031
a0001c0001t0034
a0001c0001t0035
a0001c0001t0040
a0001c0001t0045
a0001c0001t0050
a0001c0001t0051
a0001c0001t0053
a0001c0001t0057
a0001c0001t0058
a0001c0007t0026
a0002c0002t0017
a0002c0002t0030
a0006c0006t0049
 20 HG00597.hp2
HG00642.hp1
HG01243.hp2
others(17): Show 
HG00597.hp2
HG00642.hp1
HG01243.hp2
HG01255.hp2
HG01496.hp1
HG01934.hp2
HG01978.hp1
HG01993.hp2
HG02135.hp2
HG02280.hp1
HG02280.hp2
HG03098.hp2
HG03209.hp2
HG03654.hp1
NA18962.hp1
NA18980.hp2
NA19081.hp1
NA19091.hp1
NA20300.hp1
NA20805.hp1
 3_prime_UTR_variant MODIFIER c.*566dupC
c.*566dupC
HOXC8 ENSG00000037965.6 transcript ENST00000040584.6 protein_coding 2/2 567 INFO_REALIGN_3_PRIME chr12 54011942
chr12:54011943 C
C
 T
T
 1 a0001c0001t0055
a0001c0001t0055
 1 HG04199.hp2
HG04199.hp2
 3_prime_UTR_variant MODIFIER c.*562C>T
c.*562C>T
HOXC8 ENSG00000037965.6 transcript ENST00000040584.6 protein_coding 2/2 562 chr12 54011943
chr12:54011948 T
T
 C
C
 1 a0001c0001t0033
a0001c0001t0033
 1 NA18951.hp2
NA18951.hp2
 3_prime_UTR_variant MODIFIER c.*567T>C
c.*567T>C
HOXC8 ENSG00000037965.6 transcript ENST00000040584.6 protein_coding 2/2 567 chr12 54011948
chr12:54012117 G
G
 C
C
 1 a0006c0006t0049
a0006c0006t0049
 1 NA18962.hp1
NA18962.hp1
 3_prime_UTR_variant MODIFIER c.*736G>C
c.*736G>C
HOXC8 ENSG00000037965.6 transcript ENST00000040584.6 protein_coding 2/2 736 chr12 54012117
chr12:54012118 C
C
 G
G
 1 a0006c0006t0049
a0006c0006t0049
 1 NA18962.hp1
NA18962.hp1
 3_prime_UTR_variant MODIFIER c.*737C>G
c.*737C>G
HOXC8 ENSG00000037965.6 transcript ENST00000040584.6 protein_coding 2/2 737 chr12 54012118
chr12:54012128 C
C
 T
T
 1 a0006c0006t0049
a0006c0006t0049
 1 NA18962.hp1
NA18962.hp1
 3_prime_UTR_variant MODIFIER c.*747C>T
c.*747C>T
HOXC8 ENSG00000037965.6 transcript ENST00000040584.6 protein_coding 2/2 747 chr12 54012128
chr12:54012137 C
C
 T
T
 1 a0001c0001t0038
a0001c0001t0038
 1 NA19240.hp2
NA19240.hp2
 3_prime_UTR_variant MODIFIER c.*756C>T
c.*756C>T
HOXC8 ENSG00000037965.6 transcript ENST00000040584.6 protein_coding 2/2 756 chr12 54012137
chr12:54012339 T
T
 TA
TA
 3 a0001c0001t0003
a0001c0001t0013
a0001c0001t0055
a0001c0001t0003
a0001c0001t0013
a0001c0001t0055
 37 HG00597.hp1
HG00639.hp1
HG00639.hp2
others(34): Show 
HG00597.hp1
HG00639.hp1
HG00639.hp2
HG00733.hp1
HG01074.hp1
HG01074.hp2
HG01081.hp2
HG01099.hp1
HG01106.hp2
HG01192.hp1
HG01258.hp2
HG01346.hp1
HG01361.hp1
HG01496.hp2
HG01516.hp1
HG01516.hp2
HG01517.hp1
HG01978.hp2
HG02922.hp2
HG03834.hp2
HG04199.hp2
NA18612.hp2
NA18959.hp1
NA18969.hp2
NA18970.hp2
NA18973.hp1
NA18975.hp2
NA18983.hp1
NA18984.hp1
NA18991.hp2
NA18995.hp1
NA19010.hp2
NA19055.hp2
NA19068.hp2
NA19083.hp1
NA20300.hp2
NA20805.hp2
 3_prime_UTR_variant MODIFIER c.*958_*959insA
c.*958_*959insA
HOXC8 ENSG00000037965.6 transcript ENST00000040584.6 protein_coding 2/2 959 chr12 54012339
chr12:54012340 C
C
 A
A
 7 a0001c0001t0003
a0001c0001t0005
a0001c0001t0013
others(4): Show 
a0001c0001t0003
a0001c0001t0005
a0001c0001t0013
a0001c0001t0027
a0001c0001t0028
a0001c0001t0055
a0001c0001t0059
 55 HG00597.hp1
HG00609.hp1
HG00639.hp1
others(52): Show 
HG00597.hp1
HG00609.hp1
HG00639.hp1
HG00639.hp2
HG00733.hp1
HG01074.hp1
HG01074.hp2
HG01081.hp2
HG01099.hp1
HG01106.hp2
HG01192.hp1
HG01258.hp2
HG01346.hp1
HG01361.hp1
HG01496.hp2
HG01516.hp1
HG01516.hp2
HG01517.hp1
HG01978.hp2
HG02083.hp1
HG02109.hp1
HG02165.hp2
HG02572.hp1
HG02630.hp1
HG02897.hp2
HG02922.hp2
HG03704.hp1
HG03704.hp2
HG03834.hp2
HG04199.hp2
NA18612.hp2
NA18949.hp2
NA18952.hp1
NA18952.hp2
NA18955.hp1
NA18959.hp1
NA18969.hp2
NA18970.hp2
NA18973.hp1
NA18975.hp2
NA18983.hp1
NA18984.hp1
NA18991.hp2
NA18995.hp1
NA19010.hp2
NA19043.hp1
NA19055.hp2
NA19068.hp2
NA19074.hp1
NA19081.hp2
NA19083.hp1
NA19091.hp2
NA20129.hp2
NA20300.hp2
NA20805.hp2
 3_prime_UTR_variant MODIFIER c.*959C>A
c.*959C>A
HOXC8 ENSG00000037965.6 transcript ENST00000040584.6 protein_coding 2/2 959 chr12 54012340
chr12:54012340 C
C
 CA
CA
 15 a0001c0001t0004
a0001c0001t0009
a0001c0001t0010
others(12): Show 
a0001c0001t0004
a0001c0001t0009
a0001c0001t0010
a0001c0001t0016
a0001c0001t0020
a0001c0001t0022
a0001c0001t0029
a0001c0001t0038
a0001c0001t0045
a0001c0001t0050
a0001c0001t0053
a0001c0001t0057
a0003c0005t0009
a0004c0004t0020
a0005c0003t0020
 41 HG00323.hp2
HG00408.hp1
HG00408.hp2
others(38): Show 
HG00323.hp2
HG00408.hp1
HG00408.hp2
HG00597.hp2
HG00621.hp1
HG00642.hp2
HG00738.hp2
HG01496.hp1
HG01884.hp2
HG01943.hp1
HG01981.hp1
HG02145.hp1
HG02647.hp1
HG02717.hp1
HG02735.hp1
HG02735.hp2
HG02886.hp1
HG02970.hp2
HG03209.hp1
HG03209.hp2
HG03486.hp1
HG03654.hp1
NA18906.hp1
NA18944.hp1
NA18947.hp2
NA18954.hp1
NA18954.hp2
NA18964.hp2
NA18967.hp1
NA18969.hp1
NA18991.hp1
NA18995.hp2
NA19000.hp2
NA19003.hp2
NA19012.hp2
NA19079.hp2
NA19080.hp1
NA19083.hp2
NA19090.hp1
NA19240.hp2
homoSapiens_chm13v2.hp1
 3_prime_UTR_variant MODIFIER c.*973dupA
c.*973dupA
HOXC8 ENSG00000037965.6 transcript ENST00000040584.6 protein_coding 2/2 974 INFO_REALIGN_3_PRIME chr12 54012340
chr12:54012340 C
C
 CAA
CAA
 5 a0001c0001t0024
a0001c0001t0039
a0001c0001t0041
others(2): Show 
a0001c0001t0024
a0001c0001t0039
a0001c0001t0041
a0001c0001t0046
a0001c0001t0060
 6 HG02559.hp2
HG02717.hp2
HG02922.hp1
others(3): Show 
HG02559.hp2
HG02717.hp2
HG02922.hp1
HG02965.hp2
HG03225.hp2
NA19060.hp2
 3_prime_UTR_variant MODIFIER c.*972_*973dupAA
c.*972_*973dupAA
HOXC8 ENSG00000037965.6 transcript ENST00000040584.6 protein_coding 2/2 974 INFO_REALIGN_3_PRIME chr12 54012340
chr12:54012340 CA
CA
 C
C
 11 a0001c0001t0007
a0001c0001t0015
a0001c0001t0019
others(8): Show 
a0001c0001t0007
a0001c0001t0015
a0001c0001t0019
a0001c0001t0031
a0001c0001t0035
a0001c0001t0040
a0001c0001t0043
a0001c0001t0048
a0001c0001t0054
a0001c0001t0056
a0002c0002t0007
 24 HG00140.hp1
HG00323.hp1
HG00642.hp1
others(21): Show 
HG00140.hp1
HG00323.hp1
HG00642.hp1
HG01069.hp2
HG01106.hp1
HG01109.hp1
HG01255.hp2
HG01258.hp1
HG01517.hp2
HG01884.hp1
HG01943.hp2
HG02895.hp1
HG02895.hp2
HG02965.hp1
HG02976.hp1
HG03225.hp1
HG03669.hp1
NA18522.hp2
NA18960.hp2
NA19043.hp2
NA19091.hp1
NA20752.hp1
NA20752.hp2
NA21309.hp2
 3_prime_UTR_variant MODIFIER c.*973delA
c.*973delA
HOXC8 ENSG00000037965.6 transcript ENST00000040584.6 protein_coding 2/2 973 INFO_REALIGN_3_PRIME chr12 54012340
chr12:54012351 A
A
 G
G
 1 a0001c0001t0054
a0001c0001t0054
 1 HG01884.hp1
HG01884.hp1
 3_prime_UTR_variant MODIFIER c.*970A>G
c.*970A>G
HOXC8 ENSG00000037965.6 transcript ENST00000040584.6 protein_coding 2/2 970 chr12 54012351
chr12:54012441 G
G
 A
A
 1 a0001c0001t0036
a0001c0001t0036
 1 HG00140.hp2
HG00140.hp2
 3_prime_UTR_variant MODIFIER c.*1060G>A
c.*1060G>A
HOXC8 ENSG00000037965.6 transcript ENST00000040584.6 protein_coding 2/2 1060 chr12 54012441
chr12:54012508 G
G
 A
A
 3 a0001c0001t0011
a0001c0001t0023
a0001c0001t0034
a0001c0001t0011
a0001c0001t0023
a0001c0001t0034
 8 HG00423.hp2
HG00621.hp2
NA18948.hp1
others(5): Show 
HG00423.hp2
HG00621.hp2
NA18948.hp1
NA18960.hp1
NA18967.hp2
NA18980.hp2
NA19012.hp1
NA19070.hp2
 3_prime_UTR_variant MODIFIER c.*1127G>A
c.*1127G>A
HOXC8 ENSG00000037965.6 transcript ENST00000040584.6 protein_coding 2/2 1127 chr12 54012508
chr12:54012545 A
A
 G
G
 1 a0001c0001t0054
a0001c0001t0054
 1 HG01884.hp1
HG01884.hp1
 3_prime_UTR_variant MODIFIER c.*1164A>G
c.*1164A>G
HOXC8 ENSG00000037965.6 transcript ENST00000040584.6 protein_coding 2/2 1164 chr12 54012545
chr12:54012637 A
A
 G
G
 1 a0001c0001t0037
a0001c0001t0037
 1 HG03927.hp1
HG03927.hp1
 3_prime_UTR_variant MODIFIER c.*1256A>G
c.*1256A>G
HOXC8 ENSG00000037965.6 transcript ENST00000040584.6 protein_coding 2/2 1256 chr12 54012637
chr12:54012693 G
G
 A
A
 3 a0001c0001t0047
a0001c0001t0051
a0001c0001t0052
a0001c0001t0047
a0001c0001t0051
a0001c0001t0052
 3 HG00741.hp1
HG02280.hp2
HG03490.hp1
HG00741.hp1
HG02280.hp2
HG03490.hp1
 3_prime_UTR_variant MODIFIER c.*1312G>A
c.*1312G>A
HOXC8 ENSG00000037965.6 transcript ENST00000040584.6 protein_coding 2/2 1312 chr12 54012693

chr:pos ref alt #
# of ghapid:genebody level
 ghapids #
# of haplotypeids
 haplotypeids annotation impact hgvs_c hgvs_p genename geneid featuretype featureid genebody_biotype rank cdna
cdna pos length
 cds
cds pos length
 aa
aa pos length
 distance status chr pos
chr12:54009894 C
C
 G
G
 1 a0006c0006t0049g0009
a0006c0006t0049g0009
 1 NA18962.hp1
NA18962.hp1
 intron_variant MODIFIER c.436+174C>G
c.436+174C>G
HOXC8 ENSG00000037965.6 transcript ENST00000040584.6 protein_coding 1/1 chr12 54009894
chr12:54009897 G
G
 C
C
 1 a0006c0006t0049g0009
a0006c0006t0049g0009
 1 NA18962.hp1
NA18962.hp1
 intron_variant MODIFIER c.436+177G>C
c.436+177G>C
HOXC8 ENSG00000037965.6 transcript ENST00000040584.6 protein_coding 1/1 chr12 54009897
chr12:54010160 C
C
 A
A
 1 a0001c0001t0037g0003
a0001c0001t0037g0003
 1 HG03927.hp1
HG03927.hp1
 intron_variant MODIFIER c.436+440C>A
c.436+440C>A
HOXC8 ENSG00000037965.6 transcript ENST00000040584.6 protein_coding 1/1 chr12 54010160
chr12:54010223 G
G
 A
A
 1 a0001c0001t0001g0004
a0001c0001t0001g0004
 1 HG00423.hp1
HG00423.hp1
 intron_variant MODIFIER c.436+503G>A
c.436+503G>A
HOXC8 ENSG00000037965.6 transcript ENST00000040584.6 protein_coding 1/1 chr12 54010223
chr12:54010271 A
A
 C
C
 1 a0006c0006t0049g0009
a0006c0006t0049g0009
 1 NA18962.hp1
NA18962.hp1
 intron_variant MODIFIER c.436+551A>C
c.436+551A>C
HOXC8 ENSG00000037965.6 transcript ENST00000040584.6 protein_coding 1/1 chr12 54010271
chr12:54010272 C
C
 A
A
 1 a0006c0006t0049g0009
a0006c0006t0049g0009
 1 NA18962.hp1
NA18962.hp1
 intron_variant MODIFIER c.436+552C>A
c.436+552C>A
HOXC8 ENSG00000037965.6 transcript ENST00000040584.6 protein_coding 1/1 chr12 54010272
chr12:54010291 C
C
 T
T
 1 a0001c0001t0001g0008
a0001c0001t0001g0008
 1 HG03041.hp2
HG03041.hp2
 intron_variant MODIFIER c.436+571C>T
c.436+571C>T
HOXC8 ENSG00000037965.6 transcript ENST00000040584.6 protein_coding 1/1 chr12 54010291
chr12:54010303 A
A
 G
G
 1 a0001c0001t0002g0002
a0001c0001t0002g0002
 2 HG00733.hp2
HG02683.hp2
HG00733.hp2
HG02683.hp2
 intron_variant MODIFIER c.436+583A>G
c.436+583A>G
HOXC8 ENSG00000037965.6 transcript ENST00000040584.6 protein_coding 1/1 chr12 54010303
chr12:54010334 G
G
 C
C
 1 a0006c0006t0049g0009
a0006c0006t0049g0009
 1 NA18962.hp1
NA18962.hp1
 intron_variant MODIFIER c.436+614G>C
c.436+614G>C
HOXC8 ENSG00000037965.6 transcript ENST00000040584.6 protein_coding 1/1 chr12 54010334
chr12:54010335 C
C
 G
G
 1 a0006c0006t0049g0009
a0006c0006t0049g0009
 1 NA18962.hp1
NA18962.hp1
 intron_variant MODIFIER c.436+615C>G
c.436+615C>G
HOXC8 ENSG00000037965.6 transcript ENST00000040584.6 protein_coding 1/1 chr12 54010335
chr12:54010535 A
A
 T
T
 1 a0001c0001t0058g0007
a0001c0001t0058g0007
 1 HG01243.hp2
HG01243.hp2
 intron_variant MODIFIER c.437-554A>T
c.437-554A>T
HOXC8 ENSG00000037965.6 transcript ENST00000040584.6 protein_coding 1/1 chr12 54010535
chr12:54010560 G
G
 A
A
 1 a0001c0001t0005g0005
a0001c0001t0005g0005
 1 NA18952.hp2
NA18952.hp2
 intron_variant MODIFIER c.437-529G>A
c.437-529G>A
HOXC8 ENSG00000037965.6 transcript ENST00000040584.6 protein_coding 1/1 chr12 54010560
chr12:54010575 G
G
 C
C
 1 a0006c0006t0049g0009
a0006c0006t0049g0009
 1 NA18962.hp1
NA18962.hp1
 intron_variant MODIFIER c.437-514G>C
c.437-514G>C
HOXC8 ENSG00000037965.6 transcript ENST00000040584.6 protein_coding 1/1 chr12 54010575
chr12:54010576 C
C
 G
G
 1 a0006c0006t0049g0009
a0006c0006t0049g0009
 1 NA18962.hp1
NA18962.hp1
 intron_variant MODIFIER c.437-513C>G
c.437-513C>G
HOXC8 ENSG00000037965.6 transcript ENST00000040584.6 protein_coding 1/1 chr12 54010576
chr12:54011038 A
A
 G
G
 1 a0001c0001t0054g0006
a0001c0001t0054g0006
 1 HG01884.hp1
HG01884.hp1
 intron_variant MODIFIER c.437-51A>G
c.437-51A>G
HOXC8 ENSG00000037965.6 transcript ENST00000040584.6 protein_coding 1/1 chr12 54011038

  • GeneCards
  • OpenTarget
  • The Human Protein Atlas
  • Gnomad v4.1.0
  • PhewebJP (Japan)
  • UKB-TOPMed (UMich) (UK and US)
  • FinnGen r11 (Finland)
  • KoGES (Korean)
  • Mouse Phenotype
  • Zebra Phenotype
  • TogoVar

  • DNA
  • Satellite
  • All Snps 1.4.2
  • RC
  • snRNA
  • SINE
  • GC %
  • Simple_repeat
  • RNA
  • Retroposon
  • Unknown
  • Low_complexity
  • LINE
  • scRNA
  • CpG Islands
  • Phastcons (20 way)
  • srpRNA
  • Common Snps 1.4.2
  • rRNA
  • LTR
  • tRNA

  • Axiom Genome-Wide Array (Japonica Array V1)
  • Axiom Genome-Wide Array (Japonica Array V2)
  • Axiom Genome-Wide ASI Array V1 (ASI V1)
​

IGV Connection Help

IGV must be running on your computer before clicking the button.

If your browser shows the "cannot open the page" error, launch IGV and allow access via port 60151:

  1. Open IGV on your computer
  2. In IGV's menu bar: View → Preferences…
  3. Click on the "Advanced" tab
  4. Check "Enable port"
  5. Set the port number to 60151
  6. Click OK to save

For more details, please refer to Information → FAQ.