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geneid	23641
ensemblid	ENSG00000182195.9
hgncid	6548
symbol	LDOC1
name	LDOC1 regulator of NFKB signaling
refseq_nuc	NM_012317.4
refseq_prot	NP_036449.1
ensembl_nuc	ENST00000370526.5
ensembl_prot	ENSP00000359557.2
mane_status	MANE Select
chr	chrX
start	141173235
end	141177129
strand	-
ver	v1.2
region	chrX:141173235-141177129
region5000	chrX:141168235-141182129
regionname0	LDOC1_chrX_141173235_141177129
regionname5000	LDOC1_chrX_141168235_141182129

ahapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	alen	total	AFR	AMR	EAS	EUR	SAS	JPT	regionname	genename	aa	chr	start	end
a0001	1/1	146	328	78	63	142	9	34	107	LDOC1_chrX_141168235_141182129	LDOC1	copy fasta	chrX	141168235	141182129

chapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	clen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	cseq	chr	start	end
c0001	1/1	441	327	78	63	141	9	34	LDOC1_chrX_141168235_141182129	LDOC1	copy fasta	chrX	141168235	141182129
c0002	0/0	441	1	0	0	1	0	0	LDOC1_chrX_141168235_141182129	LDOC1	copy fasta	chrX	141168235	141182129

thapid	grch38 chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	tlen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	tseq	chr	start	end
t0001	1/1	3455	171	30	31	87	5	16	LDOC1_chrX_141168235_141182129	LDOC1	copy fasta	chrX	141168235	141182129
t0002	0/0	3455	67	14	11	28	4	10	LDOC1_chrX_141168235_141182129	LDOC1	copy fasta	chrX	141168235	141182129
t0003	0/0	3455	46	3	17	21	0	5	LDOC1_chrX_141168235_141182129	LDOC1	copy fasta	chrX	141168235	141182129
t0004	0/0	3455	8	6	2	0	0	0	LDOC1_chrX_141168235_141182129	LDOC1	copy fasta	chrX	141168235	141182129
t0005	0/0	3455	5	5	0	0	0	0	LDOC1_chrX_141168235_141182129	LDOC1	copy fasta	chrX	141168235	141182129
t0006	0/0	3455	4	4	0	0	0	0	LDOC1_chrX_141168235_141182129	LDOC1	copy fasta	chrX	141168235	141182129
t0007	0/0	3455	3	2	1	0	0	0	LDOC1_chrX_141168235_141182129	LDOC1	copy fasta	chrX	141168235	141182129
t0008	0/0	3455	3	3	0	0	0	0	LDOC1_chrX_141168235_141182129	LDOC1	copy fasta	chrX	141168235	141182129
t0009	0/0	3455	2	2	0	0	0	0	LDOC1_chrX_141168235_141182129	LDOC1	copy fasta	chrX	141168235	141182129
t0010	0/0	3455	2	2	0	0	0	0	LDOC1_chrX_141168235_141182129	LDOC1	copy fasta	chrX	141168235	141182129
t0011	0/0	3455	2	2	0	0	0	0	LDOC1_chrX_141168235_141182129	LDOC1	copy fasta	chrX	141168235	141182129
t0012	0/0	3456	1	0	0	1	0	0	LDOC1_chrX_141168235_141182129	LDOC1	copy fasta	chrX	141168235	141182129
t0013	0/0	3455	1	1	0	0	0	0	LDOC1_chrX_141168235_141182129	LDOC1	copy fasta	chrX	141168235	141182129
t0014	0/0	3455	1	0	1	0	0	0	LDOC1_chrX_141168235_141182129	LDOC1	copy fasta	chrX	141168235	141182129
t0015	0/0	3458	1	0	0	1	0	0	LDOC1_chrX_141168235_141182129	LDOC1	copy fasta	chrX	141168235	141182129
t0016	0/0	3456	1	0	0	1	0	0	LDOC1_chrX_141168235_141182129	LDOC1	copy fasta	chrX	141168235	141182129
t0017	0/0	3455	1	1	0	0	0	0	LDOC1_chrX_141168235_141182129	LDOC1	copy fasta	chrX	141168235	141182129
t0018	0/0	3455	1	1	0	0	0	0	LDOC1_chrX_141168235_141182129	LDOC1	copy fasta	chrX	141168235	141182129
t0019	0/0	3455	1	1	0	0	0	0	LDOC1_chrX_141168235_141182129	LDOC1	copy fasta	chrX	141168235	141182129
t0020	0/0	3453	1	0	0	1	0	0	LDOC1_chrX_141168235_141182129	LDOC1	copy fasta	chrX	141168235	141182129
t0021	0/0	3455	1	1	0	0	0	0	LDOC1_chrX_141168235_141182129	LDOC1	copy fasta	chrX	141168235	141182129
t0022	0/0	3452	1	0	0	0	0	1	LDOC1_chrX_141168235_141182129	LDOC1	copy fasta	chrX	141168235	141182129
t0023	0/0	3455	1	0	0	1	0	0	LDOC1_chrX_141168235_141182129	LDOC1	copy fasta	chrX	141168235	141182129
t0024	0/0	3455	1	0	0	1	0	0	LDOC1_chrX_141168235_141182129	LDOC1	copy fasta	chrX	141168235	141182129
t0025	0/0	3455	1	0	0	0	0	1	LDOC1_chrX_141168235_141182129	LDOC1	copy fasta	chrX	141168235	141182129
t0026	0/0	3455	1	0	0	0	0	1	LDOC1_chrX_141168235_141182129	LDOC1	copy fasta	chrX	141168235	141182129

ghapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	chr	start	end
g0000	1/1	328	78	63	142	9	34	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129

achapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	clen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	cseq	chr	start	end
a0001c0001	1/1	441	327	78	63	141	9	34	LDOC1_chrX_141168235_141182129	LDOC1	copy fasta	chrX	141168235	141182129
a0001c0002	0/0	441	1	0	0	1	0	0	LDOC1_chrX_141168235_141182129	LDOC1	copy fasta	chrX	141168235	141182129

acthapid	grch38 chm13v2	tlen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	tseq	chr	start	end
a0001c0001t0001	1/1	3895	170	30	31	86	5	16	LDOC1_chrX_141168235_141182129	LDOC1	copy fasta	chrX	141168235	141182129
a0001c0001t0002	0/0	3895	67	14	11	28	4	10	LDOC1_chrX_141168235_141182129	LDOC1	copy fasta	chrX	141168235	141182129
a0001c0001t0003	0/0	3895	46	3	17	21	0	5	LDOC1_chrX_141168235_141182129	LDOC1	copy fasta	chrX	141168235	141182129
a0001c0001t0004	0/0	3895	8	6	2	0	0	0	LDOC1_chrX_141168235_141182129	LDOC1	copy fasta	chrX	141168235	141182129
a0001c0001t0005	0/0	3895	5	5	0	0	0	0	LDOC1_chrX_141168235_141182129	LDOC1	copy fasta	chrX	141168235	141182129
a0001c0001t0006	0/0	3895	4	4	0	0	0	0	LDOC1_chrX_141168235_141182129	LDOC1	copy fasta	chrX	141168235	141182129
a0001c0001t0007	0/0	3895	3	2	1	0	0	0	LDOC1_chrX_141168235_141182129	LDOC1	copy fasta	chrX	141168235	141182129
a0001c0001t0008	0/0	3895	3	3	0	0	0	0	LDOC1_chrX_141168235_141182129	LDOC1	copy fasta	chrX	141168235	141182129
a0001c0001t0009	0/0	3895	2	2	0	0	0	0	LDOC1_chrX_141168235_141182129	LDOC1	copy fasta	chrX	141168235	141182129
a0001c0001t0010	0/0	3895	2	2	0	0	0	0	LDOC1_chrX_141168235_141182129	LDOC1	copy fasta	chrX	141168235	141182129
a0001c0001t0011	0/0	3895	2	2	0	0	0	0	LDOC1_chrX_141168235_141182129	LDOC1	copy fasta	chrX	141168235	141182129
a0001c0001t0012	0/0	3896	1	0	0	1	0	0	LDOC1_chrX_141168235_141182129	LDOC1	copy fasta	chrX	141168235	141182129
a0001c0001t0013	0/0	3895	1	1	0	0	0	0	LDOC1_chrX_141168235_141182129	LDOC1	copy fasta	chrX	141168235	141182129
a0001c0001t0014	0/0	3895	1	0	1	0	0	0	LDOC1_chrX_141168235_141182129	LDOC1	copy fasta	chrX	141168235	141182129
a0001c0001t0015	0/0	3898	1	0	0	1	0	0	LDOC1_chrX_141168235_141182129	LDOC1	copy fasta	chrX	141168235	141182129
a0001c0001t0016	0/0	3896	1	0	0	1	0	0	LDOC1_chrX_141168235_141182129	LDOC1	copy fasta	chrX	141168235	141182129
a0001c0001t0017	0/0	3895	1	1	0	0	0	0	LDOC1_chrX_141168235_141182129	LDOC1	copy fasta	chrX	141168235	141182129
a0001c0001t0018	0/0	3895	1	1	0	0	0	0	LDOC1_chrX_141168235_141182129	LDOC1	copy fasta	chrX	141168235	141182129
a0001c0001t0019	0/0	3895	1	1	0	0	0	0	LDOC1_chrX_141168235_141182129	LDOC1	copy fasta	chrX	141168235	141182129
a0001c0001t0020	0/0	3893	1	0	0	1	0	0	LDOC1_chrX_141168235_141182129	LDOC1	copy fasta	chrX	141168235	141182129
a0001c0001t0021	0/0	3895	1	1	0	0	0	0	LDOC1_chrX_141168235_141182129	LDOC1	copy fasta	chrX	141168235	141182129
a0001c0001t0022	0/0	3892	1	0	0	0	0	1	LDOC1_chrX_141168235_141182129	LDOC1	copy fasta	chrX	141168235	141182129
a0001c0001t0023	0/0	3895	1	0	0	1	0	0	LDOC1_chrX_141168235_141182129	LDOC1	copy fasta	chrX	141168235	141182129
a0001c0001t0024	0/0	3895	1	0	0	1	0	0	LDOC1_chrX_141168235_141182129	LDOC1	copy fasta	chrX	141168235	141182129
a0001c0001t0025	0/0	3895	1	0	0	0	0	1	LDOC1_chrX_141168235_141182129	LDOC1	copy fasta	chrX	141168235	141182129
a0001c0001t0026	0/0	3895	1	0	0	0	0	1	LDOC1_chrX_141168235_141182129	LDOC1	copy fasta	chrX	141168235	141182129
a0001c0002t0001	0/0	3895	1	0	0	1	0	0	LDOC1_chrX_141168235_141182129	LDOC1	copy fasta	chrX	141168235	141182129

actghapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	chr	start	end
a0001c0001t0001g0000	1/1	170	30	31	86	5	16	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
a0001c0001t0002g0000	0/0	67	14	11	28	4	10	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
a0001c0001t0003g0000	0/0	46	3	17	21	0	5	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
a0001c0001t0004g0000	0/0	8	6	2	0	0	0	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
a0001c0001t0005g0000	0/0	5	5	0	0	0	0	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
a0001c0001t0006g0000	0/0	4	4	0	0	0	0	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
a0001c0001t0007g0000	0/0	3	2	1	0	0	0	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
a0001c0001t0008g0000	0/0	3	3	0	0	0	0	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
a0001c0001t0009g0000	0/0	2	2	0	0	0	0	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
a0001c0001t0010g0000	0/0	2	2	0	0	0	0	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
a0001c0001t0011g0000	0/0	2	2	0	0	0	0	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
a0001c0001t0012g0000	0/0	1	0	0	1	0	0	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
a0001c0001t0013g0000	0/0	1	1	0	0	0	0	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
a0001c0001t0014g0000	0/0	1	0	1	0	0	0	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
a0001c0001t0015g0000	0/0	1	0	0	1	0	0	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
a0001c0001t0016g0000	0/0	1	0	0	1	0	0	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
a0001c0001t0017g0000	0/0	1	1	0	0	0	0	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
a0001c0001t0018g0000	0/0	1	1	0	0	0	0	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
a0001c0001t0019g0000	0/0	1	1	0	0	0	0	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
a0001c0001t0020g0000	0/0	1	0	0	1	0	0	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
a0001c0001t0021g0000	0/0	1	1	0	0	0	0	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
a0001c0001t0022g0000	0/0	1	0	0	0	0	1	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
a0001c0001t0023g0000	0/0	1	0	0	1	0	0	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
a0001c0001t0024g0000	0/0	1	0	0	1	0	0	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
a0001c0001t0025g0000	0/0	1	0	0	0	0	1	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
a0001c0001t0026g0000	0/0	1	0	0	0	0	1	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
a0001c0002t0001g0000	0/0	1	0	0	1	0	0	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129

sampleid	ID haplotypeid	ahapid	chapid	thapid	ghapid	gpopname	popname	regionname	genename	chr	start	end
HG00099	hp1	a0001	c0001	t0001	g0000	EUR	GBR	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
HG00099	hp2	a0001	c0001	t0002	g0000	EUR	GBR	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
HG00140	hp1	a0001	c0001	t0001	g0000	EUR	GBR	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
HG00280	hp1	a0001	c0001	t0001	g0000	EUR	FIN	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
HG00408	hp1	a0001	c0001	t0003	g0000	EAS	CHS	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
HG00408	hp2	a0001	c0001	t0001	g0000	EAS	CHS	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
HG00423	hp1	a0001	c0001	t0001	g0000	EAS	CHS	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
HG00423	hp2	a0001	c0001	t0002	g0000	EAS	CHS	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
HG00438	hp1	a0001	c0001	t0001	g0000	EAS	CHS	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
HG00438	hp2	a0001	c0001	t0002	g0000	EAS	CHS	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
HG00544	hp1	a0001	c0001	t0003	g0000	EAS	CHS	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
HG00544	hp2	a0001	c0001	t0001	g0000	EAS	CHS	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
HG00558	hp1	a0001	c0001	t0001	g0000	EAS	CHS	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
HG00558	hp2	a0001	c0001	t0001	g0000	EAS	CHS	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
HG00597	hp1	a0001	c0001	t0001	g0000	EAS	CHS	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
HG00597	hp2	a0001	c0001	t0002	g0000	EAS	CHS	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
HG00609	hp1	a0001	c0001	t0002	g0000	EAS	CHS	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
HG00621	hp1	a0001	c0001	t0002	g0000	EAS	CHS	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
HG00639	hp1	a0001	c0001	t0004	g0000	AMR	PUR	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
HG00639	hp2	a0001	c0001	t0001	g0000	AMR	PUR	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
HG00642	hp1	a0001	c0001	t0001	g0000	AMR	PUR	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
HG00673	hp1	a0001	c0001	t0001	g0000	EAS	CHS	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
HG00733	hp1	a0001	c0001	t0001	g0000	AMR	PUR	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
HG00733	hp2	a0001	c0001	t0002	g0000	AMR	PUR	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
HG00735	hp1	a0001	c0001	t0002	g0000	AMR	PUR	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
HG00735	hp2	a0001	c0001	t0001	g0000	AMR	PUR	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
HG00738	hp1	a0001	c0001	t0002	g0000	AMR	PUR	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
HG00741	hp1	a0001	c0001	t0003	g0000	AMR	PUR	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
HG00741	hp2	a0001	c0001	t0003	g0000	AMR	PUR	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
HG01069	hp1	a0001	c0001	t0001	g0000	AMR	PUR	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
HG01070	hp1	a0001	c0001	t0001	g0000	AMR	PUR	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
HG01070	hp2	a0001	c0001	t0003	g0000	AMR	PUR	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
HG01071	hp1	a0001	c0001	t0001	g0000	AMR	PUR	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
HG01071	hp2	a0001	c0001	t0003	g0000	AMR	PUR	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
HG01074	hp1	a0001	c0001	t0001	g0000	AMR	PUR	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
HG01081	hp1	a0001	c0001	t0001	g0000	AMR	PUR	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
HG01081	hp2	a0001	c0001	t0002	g0000	AMR	PUR	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
HG01099	hp1	a0001	c0001	t0001	g0000	AMR	PUR	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
HG01106	hp1	a0001	c0001	t0001	g0000	AMR	PUR	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
HG01109	hp1	a0001	c0001	t0004	g0000	AMR	PUR	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
HG01167	hp1	a0001	c0001	t0002	g0000	AMR	PUR	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
HG01168	hp1	a0001	c0001	t0001	g0000	AMR	PUR	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
HG01168	hp2	a0001	c0001	t0001	g0000	AMR	PUR	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
HG01169	hp1	a0001	c0001	t0001	g0000	AMR	PUR	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
HG01169	hp2	a0001	c0001	t0002	g0000	AMR	PUR	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
HG01175	hp1	a0001	c0001	t0001	g0000	AMR	PUR	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
HG01175	hp2	a0001	c0001	t0001	g0000	AMR	PUR	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
HG01192	hp1	a0001	c0001	t0001	g0000	AMR	PUR	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
HG01243	hp1	a0001	c0001	t0002	g0000	AMR	PUR	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
HG01255	hp1	a0001	c0001	t0001	g0000	AMR	CLM	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
HG01256	hp1	a0001	c0001	t0003	g0000	AMR	CLM	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
HG01257	hp1	a0001	c0001	t0002	g0000	AMR	CLM	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
HG01257	hp2	a0001	c0001	t0001	g0000	AMR	CLM	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
HG01258	hp1	a0001	c0001	t0002	g0000	AMR	CLM	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
HG01261	hp1	a0001	c0001	t0007	g0000	AMR	CLM	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
HG01346	hp1	a0001	c0001	t0003	g0000	AMR	CLM	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
HG01346	hp2	a0001	c0001	t0001	g0000	AMR	CLM	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
HG01358	hp1	a0001	c0001	t0001	g0000	AMR	CLM	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
HG01361	hp1	a0001	c0001	t0003	g0000	AMR	CLM	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
HG01361	hp2	a0001	c0001	t0001	g0000	AMR	CLM	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
HG01433	hp1	a0001	c0001	t0003	g0000	AMR	CLM	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
HG01496	hp1	a0001	c0001	t0003	g0000	AMR	CLM	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
HG01496	hp2	a0001	c0001	t0014	g0000	AMR	CLM	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
HG01515	hp1	a0001	c0001	t0002	g0000	EUR	IBS	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
HG01517	hp1	a0001	c0001	t0002	g0000	EUR	IBS	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
HG01517	hp2	a0001	c0001	t0001	g0000	EUR	IBS	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
HG01884	hp1	a0001	c0001	t0004	g0000	AFR	ACB	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
HG01884	hp2	a0001	c0001	t0005	g0000	AFR	ACB	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
HG01891	hp1	a0001	c0001	t0001	g0000	AFR	ACB	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
HG01891	hp2	a0001	c0001	t0008	g0000	AFR	ACB	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
HG01928	hp1	a0001	c0001	t0003	g0000	AMR	PEL	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
HG01943	hp1	a0001	c0001	t0003	g0000	AMR	PEL	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
HG01952	hp1	a0001	c0001	t0003	g0000	AMR	PEL	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
HG01975	hp1	a0001	c0001	t0003	g0000	AMR	PEL	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
HG01975	hp2	a0001	c0001	t0001	g0000	AMR	PEL	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
HG01978	hp1	a0001	c0001	t0001	g0000	AMR	PEL	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
HG01978	hp2	a0001	c0001	t0001	g0000	AMR	PEL	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
HG01981	hp1	a0001	c0001	t0003	g0000	AMR	PEL	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
HG01981	hp2	a0001	c0001	t0001	g0000	AMR	PEL	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
HG01993	hp1	a0001	c0001	t0002	g0000	AMR	PEL	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
HG01993	hp2	a0001	c0001	t0003	g0000	AMR	PEL	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
HG02004	hp1	a0001	c0001	t0001	g0000	AMR	PEL	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
HG02004	hp2	a0001	c0001	t0001	g0000	AMR	PEL	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
HG02015	hp1	a0001	c0001	t0001	g0000	EAS	KHV	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
HG02027	hp1	a0001	c0001	t0001	g0000	EAS	KHV	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
HG02040	hp1	a0001	c0001	t0001	g0000	EAS	KHV	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
HG02055	hp1	a0001	c0001	t0002	g0000	AFR	ACB	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
HG02056	hp1	a0001	c0001	t0001	g0000	EAS	KHV	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
HG02071	hp1	a0001	c0001	t0003	g0000	EAS	KHV	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
HG02074	hp1	a0001	c0001	t0001	g0000	EAS	KHV	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
HG02080	hp1	a0001	c0001	t0002	g0000	EAS	KHV	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
HG02080	hp2	a0001	c0001	t0003	g0000	EAS	KHV	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
HG02083	hp1	a0001	c0001	t0003	g0000	EAS	KHV	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
HG02129	hp1	a0001	c0001	t0001	g0000	EAS	KHV	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
HG02132	hp1	a0001	c0001	t0003	g0000	EAS	KHV	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
HG02135	hp1	a0001	c0001	t0016	g0000	EAS	KHV	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
HG02145	hp1	a0001	c0001	t0002	g0000	AFR	ACB	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
HG02148	hp1	a0001	c0001	t0001	g0000	AMR	PEL	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
HG02148	hp2	a0001	c0001	t0002	g0000	AMR	PEL	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
HG02155	hp1	a0001	c0001	t0002	g0000	EAS	CDX	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
HG02155	hp2	a0001	c0001	t0001	g0000	EAS	CDX	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
HG02165	hp1	a0001	c0001	t0003	g0000	EAS	CDX	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
HG02165	hp2	a0001	c0001	t0001	g0000	EAS	CDX	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
HG02257	hp1	a0001	c0001	t0001	g0000	AFR	ACB	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
HG02257	hp2	a0001	c0001	t0004	g0000	AFR	ACB	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
HG02258	hp1	a0001	c0001	t0002	g0000	AFR	ACB	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
HG02280	hp1	a0001	c0001	t0001	g0000	AFR	ACB	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
HG02280	hp2	a0001	c0001	t0001	g0000	AFR	ACB	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
HG02293	hp1	a0001	c0001	t0001	g0000	AMR	PEL	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
HG02293	hp2	a0001	c0001	t0003	g0000	AMR	PEL	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
HG02523	hp1	a0001	c0001	t0001	g0000	EAS	KHV	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
HG02523	hp2	a0001	c0001	t0002	g0000	EAS	KHV	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
HG02572	hp1	a0001	c0001	t0002	g0000	AFR	GWD	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
HG02602	hp1	a0001	c0001	t0002	g0000	SAS	PJL	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
HG02615	hp1	a0001	c0001	t0001	g0000	AFR	GWD	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
HG02615	hp2	a0001	c0001	t0010	g0000	AFR	GWD	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
HG02622	hp1	a0001	c0001	t0005	g0000	AFR	GWD	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
HG02622	hp2	a0001	c0001	t0002	g0000	AFR	GWD	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
HG02630	hp1	a0001	c0001	t0002	g0000	AFR	GWD	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
HG02630	hp2	a0001	c0001	t0008	g0000	AFR	GWD	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
HG02647	hp1	a0001	c0001	t0002	g0000	AFR	GWD	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
HG02683	hp1	a0001	c0001	t0025	g0000	SAS	PJL	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
HG02683	hp2	a0001	c0001	t0002	g0000	SAS	PJL	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
HG02698	hp1	a0001	c0001	t0001	g0000	SAS	PJL	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
HG02717	hp1	a0001	c0001	t0018	g0000	AFR	GWD	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
HG02723	hp1	a0001	c0001	t0005	g0000	AFR	GWD	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
HG02723	hp2	a0001	c0001	t0001	g0000	AFR	GWD	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
HG02735	hp1	a0001	c0001	t0002	g0000	SAS	PJL	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
HG02738	hp1	a0001	c0001	t0001	g0000	SAS	PJL	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
HG02809	hp1	a0001	c0001	t0001	g0000	AFR	GWD	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
HG02809	hp2	a0001	c0001	t0001	g0000	AFR	GWD	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
HG02818	hp1	a0001	c0001	t0002	g0000	AFR	GWD	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
HG02818	hp2	a0001	c0001	t0021	g0000	AFR	GWD	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
HG02886	hp1	a0001	c0001	t0001	g0000	AFR	GWD	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
HG02886	hp2	a0001	c0001	t0002	g0000	AFR	GWD	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
HG02895	hp1	a0001	c0001	t0009	g0000	AFR	GWD	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
HG02896	hp1	a0001	c0001	t0011	g0000	AFR	GWD	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
HG02896	hp2	a0001	c0001	t0001	g0000	AFR	GWD	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
HG02897	hp1	a0001	c0001	t0009	g0000	AFR	GWD	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
HG02897	hp2	a0001	c0001	t0011	g0000	AFR	GWD	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
HG02922	hp1	a0001	c0001	t0005	g0000	AFR	ESN	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
HG02922	hp2	a0001	c0001	t0007	g0000	AFR	ESN	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
HG02965	hp1	a0001	c0001	t0004	g0000	AFR	ESN	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
HG02970	hp1	a0001	c0001	t0002	g0000	AFR	ESN	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
HG02970	hp2	a0001	c0001	t0001	g0000	AFR	ESN	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
HG02976	hp1	a0001	c0001	t0001	g0000	AFR	ESN	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
HG02976	hp2	a0001	c0001	t0007	g0000	AFR	ESN	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
HG03017	hp1	a0001	c0001	t0001	g0000	SAS	PJL	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
HG03041	hp1	a0001	c0001	t0001	g0000	AFR	GWD	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
HG03041	hp2	a0001	c0001	t0001	g0000	AFR	GWD	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
HG03098	hp1	a0001	c0001	t0001	g0000	AFR	MSL	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
HG03130	hp1	a0001	c0001	t0004	g0000	AFR	ESN	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
HG03139	hp1	a0001	c0001	t0005	g0000	AFR	ESN	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
HG03209	hp1	a0001	c0001	t0002	g0000	AFR	MSL	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
HG03225	hp1	a0001	c0001	t0004	g0000	AFR	MSL	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
HG03239	hp1	a0001	c0001	t0002	g0000	SAS	PJL	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
HG03239	hp2	a0001	c0001	t0001	g0000	SAS	PJL	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
HG03453	hp1	a0001	c0001	t0017	g0000	AFR	MSL	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
HG03453	hp2	a0001	c0001	t0001	g0000	AFR	MSL	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
HG03486	hp1	a0001	c0001	t0001	g0000	AFR	MSL	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
HG03486	hp2	a0001	c0001	t0001	g0000	AFR	MSL	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
HG03490	hp1	a0001	c0001	t0003	g0000	SAS	PJL	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
HG03491	hp1	a0001	c0001	t0001	g0000	SAS	PJL	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
HG03491	hp2	a0001	c0001	t0002	g0000	SAS	PJL	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
HG03492	hp1	a0001	c0001	t0002	g0000	SAS	PJL	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
HG03516	hp1	a0001	c0001	t0010	g0000	AFR	ESN	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
HG03516	hp2	a0001	c0001	t0019	g0000	AFR	ESN	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
HG03540	hp1	a0001	c0001	t0003	g0000	AFR	GWD	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
HG03540	hp2	a0001	c0001	t0002	g0000	AFR	GWD	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
HG03579	hp1	a0001	c0001	t0001	g0000	AFR	MSL	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
HG03654	hp1	a0001	c0001	t0003	g0000	SAS	PJL	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
HG03669	hp1	a0001	c0001	t0002	g0000	SAS	PJL	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
HG03669	hp2	a0001	c0001	t0001	g0000	SAS	PJL	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
HG03688	hp1	a0001	c0001	t0026	g0000	SAS	STU	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
HG03704	hp1	a0001	c0001	t0001	g0000	SAS	PJL	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
HG03704	hp2	a0001	c0001	t0001	g0000	SAS	PJL	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
HG03710	hp1	a0001	c0001	t0003	g0000	SAS	PJL	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
HG03831	hp1	a0001	c0001	t0001	g0000	SAS	BEB	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
HG03831	hp2	a0001	c0001	t0001	g0000	SAS	BEB	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
HG03834	hp1	a0001	c0001	t0001	g0000	SAS	BEB	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
HG03834	hp2	a0001	c0001	t0003	g0000	SAS	BEB	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
HG03927	hp1	a0001	c0001	t0022	g0000	SAS	BEB	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
HG03927	hp2	a0001	c0001	t0001	g0000	SAS	BEB	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
HG03942	hp1	a0001	c0001	t0001	g0000	SAS	BEB	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
HG04115	hp1	a0001	c0001	t0002	g0000	SAS	STU	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
HG04184	hp1	a0001	c0001	t0001	g0000	SAS	BEB	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
HG04184	hp2	a0001	c0001	t0002	g0000	SAS	BEB	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
HG04199	hp1	a0001	c0001	t0002	g0000	SAS	STU	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
HG04204	hp1	a0001	c0001	t0001	g0000	SAS	STU	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
HG04228	hp1	a0001	c0001	t0001	g0000	SAS	STU	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
NA18522	hp1	a0001	c0001	t0001	g0000	AFR	YRI	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
NA18612	hp1	a0001	c0001	t0024	g0000	EAS	CHB	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
NA18747	hp1	a0001	c0001	t0002	g0000	EAS	CHB	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
NA18906	hp1	a0001	c0001	t0003	g0000	AFR	YRI	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
NA18906	hp2	a0001	c0001	t0006	g0000	AFR	YRI	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
NA18939	hp1	a0001	c0001	t0001	g0000	EAS	JPT	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
NA18939	hp2	a0001	c0001	t0003	g0000	EAS	JPT	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
NA18940	hp1	a0001	c0001	t0003	g0000	EAS	JPT	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
NA18941	hp1	a0001	c0001	t0001	g0000	EAS	JPT	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
NA18941	hp2	a0001	c0001	t0002	g0000	EAS	JPT	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
NA18942	hp1	a0001	c0001	t0001	g0000	EAS	JPT	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
NA18942	hp2	a0001	c0001	t0001	g0000	EAS	JPT	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
NA18943	hp1	a0001	c0001	t0001	g0000	EAS	JPT	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
NA18944	hp1	a0001	c0001	t0001	g0000	EAS	JPT	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
NA18945	hp1	a0001	c0002	t0001	g0000	EAS	JPT	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
NA18948	hp1	a0001	c0001	t0001	g0000	EAS	JPT	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
NA18950	hp1	a0001	c0001	t0002	g0000	EAS	JPT	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
NA18950	hp2	a0001	c0001	t0001	g0000	EAS	JPT	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
NA18952	hp1	a0001	c0001	t0002	g0000	EAS	JPT	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
NA18953	hp1	a0001	c0001	t0001	g0000	EAS	JPT	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
NA18954	hp1	a0001	c0001	t0001	g0000	EAS	JPT	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
NA18954	hp2	a0001	c0001	t0001	g0000	EAS	JPT	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
NA18957	hp1	a0001	c0001	t0001	g0000	EAS	JPT	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
NA18957	hp2	a0001	c0001	t0001	g0000	EAS	JPT	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
NA18959	hp1	a0001	c0001	t0001	g0000	EAS	JPT	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
NA18960	hp1	a0001	c0001	t0001	g0000	EAS	JPT	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
NA18961	hp1	a0001	c0001	t0001	g0000	EAS	JPT	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
NA18963	hp1	a0001	c0001	t0002	g0000	EAS	JPT	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
NA18963	hp2	a0001	c0001	t0001	g0000	EAS	JPT	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
NA18964	hp1	a0001	c0001	t0003	g0000	EAS	JPT	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
NA18964	hp2	a0001	c0001	t0012	g0000	EAS	JPT	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
NA18965	hp1	a0001	c0001	t0001	g0000	EAS	JPT	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
NA18966	hp1	a0001	c0001	t0001	g0000	EAS	JPT	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
NA18967	hp1	a0001	c0001	t0023	g0000	EAS	JPT	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
NA18969	hp1	a0001	c0001	t0001	g0000	EAS	JPT	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
NA18969	hp2	a0001	c0001	t0001	g0000	EAS	JPT	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
NA18970	hp1	a0001	c0001	t0001	g0000	EAS	JPT	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
NA18971	hp1	a0001	c0001	t0001	g0000	EAS	JPT	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
NA18972	hp1	a0001	c0001	t0002	g0000	EAS	JPT	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
NA18972	hp2	a0001	c0001	t0001	g0000	EAS	JPT	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
NA18973	hp1	a0001	c0001	t0001	g0000	EAS	JPT	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
NA18973	hp2	a0001	c0001	t0001	g0000	EAS	JPT	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
NA18974	hp1	a0001	c0001	t0015	g0000	EAS	JPT	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
NA18975	hp1	a0001	c0001	t0002	g0000	EAS	JPT	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
NA18975	hp2	a0001	c0001	t0001	g0000	EAS	JPT	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
NA18977	hp1	a0001	c0001	t0001	g0000	EAS	JPT	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
NA18978	hp1	a0001	c0001	t0001	g0000	EAS	JPT	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
NA18978	hp2	a0001	c0001	t0001	g0000	EAS	JPT	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
NA18979	hp1	a0001	c0001	t0002	g0000	EAS	JPT	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
NA18979	hp2	a0001	c0001	t0002	g0000	EAS	JPT	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
NA18980	hp1	a0001	c0001	t0002	g0000	EAS	JPT	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
NA18980	hp2	a0001	c0001	t0001	g0000	EAS	JPT	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
NA18981	hp1	a0001	c0001	t0001	g0000	EAS	JPT	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
NA18981	hp2	a0001	c0001	t0001	g0000	EAS	JPT	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
NA18982	hp1	a0001	c0001	t0001	g0000	EAS	JPT	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
NA18984	hp1	a0001	c0001	t0001	g0000	EAS	JPT	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
NA18986	hp1	a0001	c0001	t0001	g0000	EAS	JPT	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
NA18989	hp1	a0001	c0001	t0020	g0000	EAS	JPT	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
NA18990	hp1	a0001	c0001	t0001	g0000	EAS	JPT	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
NA18993	hp1	a0001	c0001	t0001	g0000	EAS	JPT	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
NA18993	hp2	a0001	c0001	t0001	g0000	EAS	JPT	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
NA18994	hp1	a0001	c0001	t0002	g0000	EAS	JPT	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
NA18995	hp1	a0001	c0001	t0002	g0000	EAS	JPT	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
NA18998	hp1	a0001	c0001	t0001	g0000	EAS	JPT	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
NA18998	hp2	a0001	c0001	t0002	g0000	EAS	JPT	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
NA18999	hp1	a0001	c0001	t0002	g0000	EAS	JPT	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
NA18999	hp2	a0001	c0001	t0001	g0000	EAS	JPT	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
NA19000	hp1	a0001	c0001	t0001	g0000	EAS	JPT	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
NA19002	hp1	a0001	c0001	t0001	g0000	EAS	JPT	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
NA19002	hp2	a0001	c0001	t0003	g0000	EAS	JPT	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
NA19003	hp1	a0001	c0001	t0001	g0000	EAS	JPT	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
NA19003	hp2	a0001	c0001	t0003	g0000	EAS	JPT	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
NA19004	hp1	a0001	c0001	t0003	g0000	EAS	JPT	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
NA19005	hp1	a0001	c0001	t0001	g0000	EAS	JPT	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
NA19006	hp1	a0001	c0001	t0001	g0000	EAS	JPT	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
NA19007	hp1	a0001	c0001	t0001	g0000	EAS	JPT	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
NA19009	hp1	a0001	c0001	t0003	g0000	EAS	JPT	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
NA19010	hp1	a0001	c0001	t0001	g0000	EAS	JPT	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
NA19010	hp2	a0001	c0001	t0002	g0000	EAS	JPT	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
NA19011	hp1	a0001	c0001	t0001	g0000	EAS	JPT	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
NA19011	hp2	a0001	c0001	t0001	g0000	EAS	JPT	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
NA19012	hp1	a0001	c0001	t0001	g0000	EAS	JPT	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
NA19030	hp1	a0001	c0001	t0001	g0000	AFR	LWK	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
NA19030	hp2	a0001	c0001	t0001	g0000	AFR	LWK	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
NA19043	hp1	a0001	c0001	t0001	g0000	AFR	LWK	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
NA19054	hp1	a0001	c0001	t0001	g0000	EAS	JPT	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
NA19054	hp2	a0001	c0001	t0002	g0000	EAS	JPT	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
NA19055	hp1	a0001	c0001	t0003	g0000	EAS	JPT	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
NA19056	hp1	a0001	c0001	t0002	g0000	EAS	JPT	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
NA19058	hp1	a0001	c0001	t0001	g0000	EAS	JPT	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
NA19060	hp1	a0001	c0001	t0001	g0000	EAS	JPT	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
NA19062	hp1	a0001	c0001	t0001	g0000	EAS	JPT	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
NA19063	hp1	a0001	c0001	t0001	g0000	EAS	JPT	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
NA19064	hp1	a0001	c0001	t0002	g0000	EAS	JPT	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
NA19064	hp2	a0001	c0001	t0001	g0000	EAS	JPT	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
NA19065	hp1	a0001	c0001	t0001	g0000	EAS	JPT	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
NA19065	hp2	a0001	c0001	t0003	g0000	EAS	JPT	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
NA19066	hp1	a0001	c0001	t0003	g0000	EAS	JPT	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
NA19067	hp1	a0001	c0001	t0001	g0000	EAS	JPT	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
NA19068	hp1	a0001	c0001	t0001	g0000	EAS	JPT	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
NA19070	hp1	a0001	c0001	t0003	g0000	EAS	JPT	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
NA19072	hp1	a0001	c0001	t0001	g0000	EAS	JPT	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
NA19075	hp1	a0001	c0001	t0002	g0000	EAS	JPT	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
NA19079	hp1	a0001	c0001	t0001	g0000	EAS	JPT	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
NA19081	hp1	a0001	c0001	t0001	g0000	EAS	JPT	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
NA19081	hp2	a0001	c0001	t0003	g0000	EAS	JPT	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
NA19082	hp1	a0001	c0001	t0003	g0000	EAS	JPT	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
NA19083	hp1	a0001	c0001	t0001	g0000	EAS	JPT	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
NA19085	hp1	a0001	c0001	t0001	g0000	EAS	JPT	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
NA19086	hp1	a0001	c0001	t0001	g0000	EAS	JPT	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
NA19088	hp1	a0001	c0001	t0001	g0000	EAS	JPT	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
NA19090	hp1	a0001	c0001	t0003	g0000	EAS	JPT	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
NA19090	hp2	a0001	c0001	t0002	g0000	EAS	JPT	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
NA19091	hp1	a0001	c0001	t0001	g0000	EAS	JPT	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
NA19240	hp1	a0001	c0001	t0006	g0000	AFR	YRI	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
NA19240	hp2	a0001	c0001	t0001	g0000	AFR	YRI	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
NA20129	hp1	a0001	c0001	t0006	g0000	AFR	ASW	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
NA20129	hp2	a0001	c0001	t0001	g0000	AFR	ASW	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
NA20752	hp1	a0001	c0001	t0002	g0000	EUR	TSI	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
NA20805	hp1	a0001	c0001	t0001	g0000	EUR	TSI	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
NA20905	hp1	a0001	c0001	t0003	g0000	SAS	GIH	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
HG01123	hp1	a0001	c0001	t0001	g0000	AMR	CLM	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
HG01123	hp2	a0001	c0001	t0003	g0000	AMR	CLM	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
HG02109	hp1	a0001	c0001	t0002	g0000	AFR	ACB	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
HG02109	hp2	a0001	c0001	t0001	g0000	AFR	ACB	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
HG02486	hp1	a0001	c0001	t0001	g0000	AFR	ACB	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
HG02559	hp1	a0001	c0001	t0003	g0000	AFR	ACB	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
HG02559	hp2	a0001	c0001	t0001	g0000	AFR	ACB	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
HG03471	hp1	a0001	c0001	t0006	g0000	AFR	MSL	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
HG06807	hp1	a0001	c0001	t0008	g0000	AFR	USA	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
HG06807	hp2	a0001	c0001	t0013	g0000	AFR	USA	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
NA18955	hp1	a0001	c0001	t0001	g0000	EAS	JPT	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
NA20300	hp1	a0001	c0001	t0001	g0000	AFR	USA	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
NA20300	hp2	a0001	c0001	t0002	g0000	AFR	USA	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
NA21309	hp1	a0001	c0001	t0004	g0000	AFR	LWK	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
NA21309	hp2	a0001	c0001	t0001	g0000	AFR	LWK	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
homoSapiens_chm13v2	hp1	a0001	c0001	t0001	g0000	REF	REF	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129
homoSapiens_grch38	hp1	a0001	c0001	t0001	g0000	REF	REF	LDOC1_chrX_141168235_141182129	LDOC1	chrX	141168235	141182129

chr:pos	ref	alt	# # of ahapid:amino-acid(protein) level	ahapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	hgvs_p	genename	geneid	featuretype	featureid	transcript_biotype	rank	cdna cdna pos length	cds cds pos length	aa aa pos length	distance	status	chr	pos

chr:pos	ref	alt	# # of chapid	chapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	hgvs_p	genename	geneid	featuretype	featureid	transcript_biotype	rank	cdna cdna pos length	cds cds pos length	aa aa pos length	distance	status	chr	pos
chrX:141176701	G G	A A	1	a0001c0002 a0001c0002	1	NA18945.hp1 NA18945.hp1	synonymous_variant	LOW	c.321C>T c.321C>T	p.Tyr107Tyr p.Tyr107Tyr	LDOC1	ENSG00000182195.9	transcript	ENST00000370526.5	protein_coding	1/1	429/3895	321/441	107/146			chrX	141176701

chr:pos	ref	alt	# # of thapid:transcript level	thapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	chr	pos
chrX:141173247	T T	C C	1	a0001c0001t0014 a0001c0001t0014	1	HG01496.hp2 HG01496.hp2	3_prime_UTR_variant	MODIFIER	c.3334A>G c.3334A>G	LDOC1	ENSG00000182195.9	transcript	ENST00000370526.5	protein_coding	1/1	3334	chrX	141173247
chrX:141173272	A A	C C	12	a0001c0001t0003 a0001c0001t0004 a0001c0001t0005 others(9): Show a0001c0001t0003 a0001c0001t0004 a0001c0001t0005 a0001c0001t0006 a0001c0001t0007 a0001c0001t0008 a0001c0001t0009 a0001c0001t0010 a0001c0001t0011 a0001c0001t0013 a0001c0001t0018 a0001c0001t0021	78	HG00408.hp1 HG00544.hp1 HG00639.hp1 others(75): Show HG00408.hp1 HG00544.hp1 HG00639.hp1 HG00741.hp1 HG00741.hp2 HG01070.hp2 HG01071.hp2 HG01109.hp1 HG01123.hp2 HG01256.hp1 HG01261.hp1 HG01346.hp1 HG01361.hp1 HG01433.hp1 HG01496.hp1 HG01884.hp1 HG01884.hp2 HG01891.hp2 HG01928.hp1 HG01943.hp1 HG01952.hp1 HG01975.hp1 HG01981.hp1 HG01993.hp2 HG02071.hp1 HG02080.hp2 HG02083.hp1 HG02132.hp1 HG02165.hp1 HG02257.hp2 HG02293.hp2 HG02559.hp1 HG02615.hp2 HG02622.hp1 HG02630.hp2 HG02717.hp1 HG02723.hp1 HG02818.hp2 HG02895.hp1 HG02896.hp1 HG02897.hp1 HG02897.hp2 HG02922.hp1 HG02922.hp2 HG02965.hp1 HG02976.hp2 HG03130.hp1 HG03139.hp1 HG03225.hp1 HG03471.hp1 HG03490.hp1 HG03516.hp1 HG03540.hp1 HG03654.hp1 HG03710.hp1 HG03834.hp2 HG06807.hp1 HG06807.hp2 NA18906.hp1 NA18906.hp2 NA18939.hp2 NA18940.hp1 NA18964.hp1 NA19002.hp2 NA19003.hp2 NA19004.hp1 NA19009.hp1 NA19055.hp1 NA19065.hp2 NA19066.hp1 NA19070.hp1 NA19081.hp2 NA19082.hp1 NA19090.hp1 NA19240.hp1 NA20129.hp1 NA20905.hp1 NA21309.hp1	3_prime_UTR_variant	MODIFIER	c.3309T>G c.3309T>G	LDOC1	ENSG00000182195.9	transcript	ENST00000370526.5	protein_coding	1/1	3309	chrX	141173272
chrX:141173427	T T	C C	1	a0001c0001t0013 a0001c0001t0013	1	HG06807.hp2 HG06807.hp2	3_prime_UTR_variant	MODIFIER	c.3154A>G c.3154A>G	LDOC1	ENSG00000182195.9	transcript	ENST00000370526.5	protein_coding	1/1	3154	chrX	141173427
chrX:141173754	C C	G G	1	a0001c0001t0023 a0001c0001t0023	1	NA18967.hp1 NA18967.hp1	3_prime_UTR_variant	MODIFIER	c.2827G>C c.2827G>C	LDOC1	ENSG00000182195.9	transcript	ENST00000370526.5	protein_coding	1/1	2827	chrX	141173754
chrX:141173828	A A	G G	1	a0001c0001t0018 a0001c0001t0018	1	HG02717.hp1 HG02717.hp1	3_prime_UTR_variant	MODIFIER	c.2753T>C c.2753T>C	LDOC1	ENSG00000182195.9	transcript	ENST00000370526.5	protein_coding	1/1	2753	chrX	141173828
chrX:141174029	C C	T T	3	a0001c0001t0006 a0001c0001t0009 a0001c0001t0013 a0001c0001t0006 a0001c0001t0009 a0001c0001t0013	7	HG02895.hp1 HG02897.hp1 HG03471.hp1 others(4): Show HG02895.hp1 HG02897.hp1 HG03471.hp1 HG06807.hp2 NA18906.hp2 NA19240.hp1 NA20129.hp1	3_prime_UTR_variant	MODIFIER	c.2552G>A c.2552G>A	LDOC1	ENSG00000182195.9	transcript	ENST00000370526.5	protein_coding	1/1	2552	chrX	141174029
chrX:141174088	C C	A A	1	a0001c0001t0024 a0001c0001t0024	1	NA18612.hp1 NA18612.hp1	3_prime_UTR_variant	MODIFIER	c.2493G>T c.2493G>T	LDOC1	ENSG00000182195.9	transcript	ENST00000370526.5	protein_coding	1/1	2493	chrX	141174088
chrX:141174164	C C	T T	2	a0001c0001t0004 a0001c0001t0018 a0001c0001t0004 a0001c0001t0018	9	HG00639.hp1 HG01109.hp1 HG01884.hp1 others(6): Show HG00639.hp1 HG01109.hp1 HG01884.hp1 HG02257.hp2 HG02717.hp1 HG02965.hp1 HG03130.hp1 HG03225.hp1 NA21309.hp1	3_prime_UTR_variant	MODIFIER	c.2417G>A c.2417G>A	LDOC1	ENSG00000182195.9	transcript	ENST00000370526.5	protein_coding	1/1	2417	chrX	141174164
chrX:141174191	T T	C C	1	a0001c0001t0011 a0001c0001t0011	2	HG02896.hp1 HG02897.hp2 HG02896.hp1 HG02897.hp2	3_prime_UTR_variant	MODIFIER	c.2390A>G c.2390A>G	LDOC1	ENSG00000182195.9	transcript	ENST00000370526.5	protein_coding	1/1	2390	chrX	141174191
chrX:141174466	TATC TATC	T T	1	a0001c0001t0022 a0001c0001t0022	1	HG03927.hp1 HG03927.hp1	3_prime_UTR_variant	MODIFIER	c.2112_2114delGAT c.2112_2114delGAT	LDOC1	ENSG00000182195.9	transcript	ENST00000370526.5	protein_coding	1/1	2112	chrX	141174466
chrX:141174597	G G	A A	1	a0001c0001t0025 a0001c0001t0025	1	HG02683.hp1 HG02683.hp1	3_prime_UTR_variant	MODIFIER	c.1984C>T c.1984C>T	LDOC1	ENSG00000182195.9	transcript	ENST00000370526.5	protein_coding	1/1	1984	chrX	141174597
chrX:141174962	T T	G G	1	a0001c0001t0008 a0001c0001t0008	3	HG01891.hp2 HG02630.hp2 HG06807.hp1 HG01891.hp2 HG02630.hp2 HG06807.hp1	3_prime_UTR_variant	MODIFIER	c.1619A>C c.1619A>C	LDOC1	ENSG00000182195.9	transcript	ENST00000370526.5	protein_coding	1/1	1619	chrX	141174962
chrX:141175215	G G	A A	1	a0001c0001t0008 a0001c0001t0008	3	HG01891.hp2 HG02630.hp2 HG06807.hp1 HG01891.hp2 HG02630.hp2 HG06807.hp1	3_prime_UTR_variant	MODIFIER	c.1366C>T c.1366C>T	LDOC1	ENSG00000182195.9	transcript	ENST00000370526.5	protein_coding	1/1	1366	chrX	141175215
chrX:141175301	A A	G G	4	a0001c0001t0006 a0001c0001t0009 a0001c0001t0013 others(1): Show a0001c0001t0006 a0001c0001t0009 a0001c0001t0013 a0001c0001t0021	8	HG02818.hp2 HG02895.hp1 HG02897.hp1 others(5): Show HG02818.hp2 HG02895.hp1 HG02897.hp1 HG03471.hp1 HG06807.hp2 NA18906.hp2 NA19240.hp1 NA20129.hp1	3_prime_UTR_variant	MODIFIER	c.1280T>C c.1280T>C	LDOC1	ENSG00000182195.9	transcript	ENST00000370526.5	protein_coding	1/1	1280	chrX	141175301
chrX:141175433	T T	C C	2	a0001c0001t0004 a0001c0001t0018 a0001c0001t0004 a0001c0001t0018	9	HG00639.hp1 HG01109.hp1 HG01884.hp1 others(6): Show HG00639.hp1 HG01109.hp1 HG01884.hp1 HG02257.hp2 HG02717.hp1 HG02965.hp1 HG03130.hp1 HG03225.hp1 NA21309.hp1	3_prime_UTR_variant	MODIFIER	c.1148A>G c.1148A>G	LDOC1	ENSG00000182195.9	transcript	ENST00000370526.5	protein_coding	1/1	1148	chrX	141175433
chrX:141175445	C C	T T	1	a0001c0001t0005 a0001c0001t0005	5	HG01884.hp2 HG02622.hp1 HG02723.hp1 others(2): Show HG01884.hp2 HG02622.hp1 HG02723.hp1 HG02922.hp1 HG03139.hp1	3_prime_UTR_variant	MODIFIER	c.1136G>A c.1136G>A	LDOC1	ENSG00000182195.9	transcript	ENST00000370526.5	protein_coding	1/1	1136	chrX	141175445
chrX:141175461	C C	T T	1	a0001c0001t0007 a0001c0001t0007	3	HG01261.hp1 HG02922.hp2 HG02976.hp2 HG01261.hp1 HG02922.hp2 HG02976.hp2	3_prime_UTR_variant	MODIFIER	c.1120G>A c.1120G>A	LDOC1	ENSG00000182195.9	transcript	ENST00000370526.5	protein_coding	1/1	1120	chrX	141175461
chrX:141175557	A A	G G	1	a0001c0001t0010 a0001c0001t0010	2	HG02615.hp2 HG03516.hp1 HG02615.hp2 HG03516.hp1	3_prime_UTR_variant	MODIFIER	c.1024T>C c.1024T>C	LDOC1	ENSG00000182195.9	transcript	ENST00000370526.5	protein_coding	1/1	1024	chrX	141175557
chrX:141175589	C C	G G	1	a0001c0001t0008 a0001c0001t0008	3	HG01891.hp2 HG02630.hp2 HG06807.hp1 HG01891.hp2 HG02630.hp2 HG06807.hp1	3_prime_UTR_variant	MODIFIER	c.992G>C c.992G>C	LDOC1	ENSG00000182195.9	transcript	ENST00000370526.5	protein_coding	1/1	992	chrX	141175589
chrX:141175675	C C	T T	1	a0001c0001t0009 a0001c0001t0009	2	HG02895.hp1 HG02897.hp1 HG02895.hp1 HG02897.hp1	3_prime_UTR_variant	MODIFIER	c.906G>A c.906G>A	LDOC1	ENSG00000182195.9	transcript	ENST00000370526.5	protein_coding	1/1	906	chrX	141175675
chrX:141175890	T T	C C	2	a0001c0001t0004 a0001c0001t0018 a0001c0001t0004 a0001c0001t0018	9	HG00639.hp1 HG01109.hp1 HG01884.hp1 others(6): Show HG00639.hp1 HG01109.hp1 HG01884.hp1 HG02257.hp2 HG02717.hp1 HG02965.hp1 HG03130.hp1 HG03225.hp1 NA21309.hp1	3_prime_UTR_variant	MODIFIER	c.691A>G c.691A>G	LDOC1	ENSG00000182195.9	transcript	ENST00000370526.5	protein_coding	1/1	691	chrX	141175890
chrX:141175993	AG AG	A A	1	a0001c0001t0020 a0001c0001t0020	1	NA18989.hp1 NA18989.hp1	3_prime_UTR_variant	MODIFIER	c.587delC c.587delC	LDOC1	ENSG00000182195.9	transcript	ENST00000370526.5	protein_coding	1/1	587	chrX	141175993
chrX:141176185	TG TG	T T	1	a0001c0001t0020 a0001c0001t0020	1	NA18989.hp1 NA18989.hp1	3_prime_UTR_variant	MODIFIER	c.395delC c.395delC	LDOC1	ENSG00000182195.9	transcript	ENST00000370526.5	protein_coding	1/1	395	chrX	141176185
chrX:141176202	G G	T T	1	a0001c0001t0019 a0001c0001t0019	1	HG03516.hp2 HG03516.hp2	3_prime_UTR_variant	MODIFIER	c.379C>A c.379C>A	LDOC1	ENSG00000182195.9	transcript	ENST00000370526.5	protein_coding	1/1	379	chrX	141176202
chrX:141176233	C C	T T	13	a0001c0001t0002 a0001c0001t0004 a0001c0001t0006 others(10): Show a0001c0001t0002 a0001c0001t0004 a0001c0001t0006 a0001c0001t0007 a0001c0001t0008 a0001c0001t0009 a0001c0001t0010 a0001c0001t0012 a0001c0001t0013 a0001c0001t0014 a0001c0001t0017 a0001c0001t0018 a0001c0001t0026	95	HG00099.hp2 HG00423.hp2 HG00438.hp2 others(92): Show HG00099.hp2 HG00423.hp2 HG00438.hp2 HG00597.hp2 HG00609.hp1 HG00621.hp1 HG00639.hp1 HG00733.hp2 HG00735.hp1 HG00738.hp1 HG01081.hp2 HG01109.hp1 HG01167.hp1 HG01169.hp2 HG01243.hp1 HG01257.hp1 HG01258.hp1 HG01261.hp1 HG01496.hp2 HG01515.hp1 HG01517.hp1 HG01884.hp1 HG01891.hp2 HG01993.hp1 HG02055.hp1 HG02080.hp1 HG02109.hp1 HG02145.hp1 HG02148.hp2 HG02155.hp1 HG02257.hp2 HG02258.hp1 HG02523.hp2 HG02572.hp1 HG02602.hp1 HG02615.hp2 HG02622.hp2 HG02630.hp1 HG02630.hp2 HG02647.hp1 HG02683.hp2 HG02717.hp1 HG02735.hp1 HG02818.hp1 HG02886.hp2 HG02895.hp1 HG02897.hp1 HG02922.hp2 HG02965.hp1 HG02970.hp1 HG02976.hp2 HG03130.hp1 HG03209.hp1 HG03225.hp1 HG03239.hp1 HG03453.hp1 HG03471.hp1 HG03491.hp2 HG03492.hp1 HG03516.hp1 HG03540.hp2 HG03669.hp1 HG03688.hp1 HG04115.hp1 HG04184.hp2 HG04199.hp1 HG06807.hp1 HG06807.hp2 NA18747.hp1 NA18906.hp2 NA18941.hp2 NA18950.hp1 NA18952.hp1 NA18963.hp1 NA18964.hp2 NA18972.hp1 NA18975.hp1 NA18979.hp1 NA18979.hp2 NA18980.hp1 NA18994.hp1 NA18995.hp1 NA18998.hp2 NA18999.hp1 NA19010.hp2 NA19054.hp2 NA19056.hp1 NA19064.hp1 NA19075.hp1 NA19090.hp2 NA19240.hp1 NA20129.hp1 NA20300.hp2 NA20752.hp1 NA21309.hp1	3_prime_UTR_variant	MODIFIER	c.348G>A c.348G>A	LDOC1	ENSG00000182195.9	transcript	ENST00000370526.5	protein_coding	1/1	348	chrX	141176233
chrX:141176377	G G	C C	1	a0001c0001t0008 a0001c0001t0008	3	HG01891.hp2 HG02630.hp2 HG06807.hp1 HG01891.hp2 HG02630.hp2 HG06807.hp1	3_prime_UTR_variant	MODIFIER	c.204C>G c.204C>G	LDOC1	ENSG00000182195.9	transcript	ENST00000370526.5	protein_coding	1/1	204	chrX	141176377
chrX:141176528	G G	GGA GGA	1	a0001c0001t0015 a0001c0001t0015	1	NA18974.hp1 NA18974.hp1	3_prime_UTR_variant	MODIFIER	c.52_53insTC c.52_53insTC	LDOC1	ENSG00000182195.9	transcript	ENST00000370526.5	protein_coding	1/1	52	chrX	141176528
chrX:141176529	A A	AG AG	2	a0001c0001t0012 a0001c0001t0016 a0001c0001t0012 a0001c0001t0016	2	HG02135.hp1 NA18964.hp2 HG02135.hp1 NA18964.hp2	3_prime_UTR_variant	MODIFIER	c.51dupC c.51dupC	LDOC1	ENSG00000182195.9	transcript	ENST00000370526.5	protein_coding	1/1	51	chrX	141176529
chrX:141176529	A A	G G	1	a0001c0001t0015 a0001c0001t0015	1	NA18974.hp1 NA18974.hp1	3_prime_UTR_variant	MODIFIER	c.52T>C c.52T>C	LDOC1	ENSG00000182195.9	transcript	ENST00000370526.5	protein_coding	1/1	52	chrX	141176529
chrX:141177037	A A	AG AG	1	a0001c0001t0015 a0001c0001t0015	1	NA18974.hp1 NA18974.hp1	5_prime_UTR_variant	MODIFIER	c.-17dupC c.-17dupC	LDOC1	ENSG00000182195.9	transcript	ENST00000370526.5	protein_coding	1/1	17	chrX	141177037
chrX:141177083	C C	G G	10	a0001c0001t0002 a0001c0001t0006 a0001c0001t0007 others(7): Show a0001c0001t0002 a0001c0001t0006 a0001c0001t0007 a0001c0001t0008 a0001c0001t0009 a0001c0001t0010 a0001c0001t0012 a0001c0001t0013 a0001c0001t0014 a0001c0001t0026	85	HG00099.hp2 HG00423.hp2 HG00438.hp2 others(82): Show HG00099.hp2 HG00423.hp2 HG00438.hp2 HG00597.hp2 HG00609.hp1 HG00621.hp1 HG00733.hp2 HG00735.hp1 HG00738.hp1 HG01081.hp2 HG01167.hp1 HG01169.hp2 HG01243.hp1 HG01257.hp1 HG01258.hp1 HG01261.hp1 HG01496.hp2 HG01515.hp1 HG01517.hp1 HG01891.hp2 HG01993.hp1 HG02055.hp1 HG02080.hp1 HG02109.hp1 HG02145.hp1 HG02148.hp2 HG02155.hp1 HG02258.hp1 HG02523.hp2 HG02572.hp1 HG02602.hp1 HG02615.hp2 HG02622.hp2 HG02630.hp1 HG02630.hp2 HG02647.hp1 HG02683.hp2 HG02735.hp1 HG02818.hp1 HG02886.hp2 HG02895.hp1 HG02897.hp1 HG02922.hp2 HG02970.hp1 HG02976.hp2 HG03209.hp1 HG03239.hp1 HG03471.hp1 HG03491.hp2 HG03492.hp1 HG03516.hp1 HG03540.hp2 HG03669.hp1 HG03688.hp1 HG04115.hp1 HG04184.hp2 HG04199.hp1 HG06807.hp1 HG06807.hp2 NA18747.hp1 NA18906.hp2 NA18941.hp2 NA18950.hp1 NA18952.hp1 NA18963.hp1 NA18964.hp2 NA18972.hp1 NA18975.hp1 NA18979.hp1 NA18979.hp2 NA18980.hp1 NA18994.hp1 NA18995.hp1 NA18998.hp2 NA18999.hp1 NA19010.hp2 NA19054.hp2 NA19056.hp1 NA19064.hp1 NA19075.hp1 NA19090.hp2 NA19240.hp1 NA20129.hp1 NA20300.hp2 NA20752.hp1	5_prime_UTR_variant	MODIFIER	c.-62G>C c.-62G>C	LDOC1	ENSG00000182195.9	transcript	ENST00000370526.5	protein_coding	1/1	62	chrX	141177083
chrX:141177107	G G	C C	1	a0001c0001t0026 a0001c0001t0026	1	HG03688.hp1 HG03688.hp1	5_prime_UTR_variant	MODIFIER	c.-86C>G c.-86C>G	LDOC1	ENSG00000182195.9	transcript	ENST00000370526.5	protein_coding	1/1	86	chrX	141177107

chr:pos	ref	alt	# # of ghapid:genebody level	ghapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	hgvs_p	genename	geneid	featuretype	featureid	genebody_biotype	rank	cdna cdna pos length	cds cds pos length	aa aa pos length	distance	status	chr	pos

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🧬 JoGo Online Haplotype Explorer LDOC1_chrX_141168235_141182129

JoGo Local Haplotype Explorer (on iGV) LDOC1_chrX_141168235_141182129

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🧬 Gene Summary

AAmino acid(protein) Level Haplotype Info (Total: 1)

CCoding Level Haplotype Info (Total: 2)

TTranscript Level Haplotype Info (Total: 26)

GGenebody Level Haplotype Info (Total: 1)

A C AC Level (Amino Acid + Coding) Haplotype Info (Total: 2)

A C T ACT Level (Amino Acid + Coding + Transcript) Haplotype Info (Total: 27)

A C T G ACTG Level (Amino Acid + Coding + Transcript + Genebody) Haplotype Info (Total: 27)

Haplotype Details by Sample (Haploid Level) (Total: 328)

AAmino acid(protein) Level Haplotype Related Variants (Effect to Protein Coding Variants) (Total: 0)

CCoding Level Variants (Synonymous Mutations) (Total: 1)

TTranscript Level Haplotype Variants (5'UTR+3'UTR) (Total: 32)

GGenebody Level Haplotype Variants (Intron) (Total: 0)

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Annotation (Repeats)

Annotation (SNP Array)