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ALDH2_chr12_111761933_111822532 / BRCA1_chr17_43039295_43130364 etc.

  Error connecting to IGV?   SNX12_chrX_71054247_71073334  SNX12_chrX_71054247_71073334 (clean+top1000)

Multiple Alignments (by translate haplotype frequency)Multiple Alignments (by aa haplotype frequency) Multiple Alignments (by translate haplotype similarity)Multiple Alignments (by aa haplotype similarity)

Item Value
geneid 29934
ensemblid ENSG00000147164.12
hgncid 14976
symbol SNX12
name sorting nexin 12
refseq_nuc NM_013346.4
refseq_prot NP_037478.2
ensembl_nuc ENST00000374274.8
ensembl_prot ENSP00000363392.3
mane_status MANE Select
chr chrX
start 71059247
end 71068334
strand -
ver v1.2
region chrX:71059247-71068334
region5000 chrX:71054247-71073334
regionname0 SNX12_chrX_71059247_71068334
regionname5000 SNX12_chrX_71054247_71073334

ahapid grch38/
chm13v2 		alen total AFR AMR EAS EUR SAS JPT regionname genename aa chr start end
a0001 1/1 162 308 74 62 131 9 30 100 SNX12_chrX_71054247_71073334 SNX12 copy fasta chrX 71054247 71073334
a0002 0/0 162 1 0 0 1 0 0 1 SNX12_chrX_71054247_71073334 SNX12 copy fasta chrX 71054247 71073334

chapid grch38/
chm13v2 		alen clen total AFR AMR EAS EUR SAS regionname genename cseq chr start end
c0001 1/1 489 291 69 60 122 9 29 SNX12_chrX_71054247_71073334 SNX12 copy fasta chrX 71054247 71073334
c0002 0/0 489 17 5 2 9 0 1 SNX12_chrX_71054247_71073334 SNX12 copy fasta chrX 71054247 71073334
c0003 0/0 489 1 0 0 1 0 0 SNX12_chrX_71054247_71073334 SNX12 copy fasta chrX 71054247 71073334

thapid grch38
chm13v2 		tlen total AFR AMR EAS EUR SAS regionname genename tseq chr start end
t0001 0/1 1798 152 56 36 42 5 12 SNX12_chrX_71054247_71073334 SNX12 copy fasta chrX 71054247 71073334
t0002 1/0 1798 122 8 19 77 3 14 SNX12_chrX_71054247_71073334 SNX12 copy fasta chrX 71054247 71073334
t0003 0/0 1798 16 5 2 8 0 1 SNX12_chrX_71054247_71073334 SNX12 copy fasta chrX 71054247 71073334
t0004 0/0 1798 5 0 3 0 1 1 SNX12_chrX_71054247_71073334 SNX12 copy fasta chrX 71054247 71073334
t0005 0/0 1798 3 3 0 0 0 0 SNX12_chrX_71054247_71073334 SNX12 copy fasta chrX 71054247 71073334
t0006 0/0 1798 2 0 2 0 0 0 SNX12_chrX_71054247_71073334 SNX12 copy fasta chrX 71054247 71073334
t0007 0/0 1802 1 0 0 1 0 0 SNX12_chrX_71054247_71073334 SNX12 copy fasta chrX 71054247 71073334
t0008 0/0 1798 1 0 0 0 0 1 SNX12_chrX_71054247_71073334 SNX12 copy fasta chrX 71054247 71073334
t0009 0/0 1798 1 1 0 0 0 0 SNX12_chrX_71054247_71073334 SNX12 copy fasta chrX 71054247 71073334
t0010 0/0 1798 1 1 0 0 0 0 SNX12_chrX_71054247_71073334 SNX12 copy fasta chrX 71054247 71073334
t0011 0/0 1798 1 0 0 1 0 0 SNX12_chrX_71054247_71073334 SNX12 copy fasta chrX 71054247 71073334
t0012 0/0 1798 1 0 0 1 0 0 SNX12_chrX_71054247_71073334 SNX12 copy fasta chrX 71054247 71073334
t0013 0/0 1799 1 0 0 1 0 0 SNX12_chrX_71054247_71073334 SNX12 copy fasta chrX 71054247 71073334
t0014 0/0 1798 1 0 0 0 0 1 SNX12_chrX_71054247_71073334 SNX12 copy fasta chrX 71054247 71073334
t0015 0/0 1799 1 0 0 1 0 0 SNX12_chrX_71054247_71073334 SNX12 copy fasta chrX 71054247 71073334

ghapid grch38/
chm13v2 		total AFR AMR EAS EUR SAS regionname genename chr start end
g0001 1/0 72 2 8 48 3 10 SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
g0002 0/0 30 0 15 14 0 1 SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
g0003 0/1 23 15 2 0 2 3 SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
g0004 0/0 10 1 4 5 0 0 SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
g0005 0/0 10 0 0 9 0 1 SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
g0006 0/0 8 8 0 0 0 0 SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
g0007 0/0 7 0 5 0 2 0 SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
g0008 0/0 7 3 1 2 0 1 SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
g0009 0/0 7 0 1 6 0 0 SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
g0010 0/0 6 0 0 6 0 0 SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
g0011 0/0 5 5 0 0 0 0 SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
g0012 0/0 4 0 2 0 1 1 SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
g0013 0/0 4 0 3 1 0 0 SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
g0014 0/0 4 0 1 3 0 0 SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
g0015 0/0 3 0 2 1 0 0 SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
g0016 0/0 3 3 0 0 0 0 SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
g0017 0/0 3 2 1 0 0 0 SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
g0018 0/0 3 0 0 3 0 0 SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
g0019 0/0 3 2 0 0 1 0 SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
g0020 0/0 3 3 0 0 0 0 SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
g0021 0/0 2 0 1 1 0 0 SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
g0022 0/0 2 2 0 0 0 0 SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
g0023 0/0 2 2 0 0 0 0 SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
g0024 0/0 2 1 0 1 0 0 SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
g0025 0/0 2 1 1 0 0 0 SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
g0026 0/0 2 0 0 1 0 1 SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
g0027 0/0 2 0 0 2 0 0 SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
g0028 0/0 2 0 0 2 0 0 SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
g0029 0/0 2 0 0 2 0 0 SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
g0030 0/0 1 0 0 0 0 1 SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
g0031 0/0 1 0 0 1 0 0 SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
g0032 0/0 1 0 0 1 0 0 SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
g0033 0/0 1 1 0 0 0 0 SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
g0034 0/0 1 1 0 0 0 0 SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
g0035 0/0 1 1 0 0 0 0 SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
g0036 0/0 1 0 1 0 0 0 SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
g0037 0/0 1 0 1 0 0 0 SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
g0038 0/0 1 0 1 0 0 0 SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
g0039 0/0 1 0 0 0 0 1 SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
g0040 0/0 1 1 0 0 0 0 SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
g0041 0/0 1 0 1 0 0 0 SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
g0042 0/0 1 0 0 1 0 0 SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
g0043 0/0 1 0 1 0 0 0 SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
g0044 0/0 1 0 0 1 0 0 SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
g0045 0/0 1 1 0 0 0 0 SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
g0046 0/0 1 1 0 0 0 0 SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
g0047 0/0 1 1 0 0 0 0 SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
g0048 0/0 1 0 0 0 0 1 SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
g0049 0/0 1 0 0 1 0 0 SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
g0050 0/0 1 1 0 0 0 0 SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
g0051 0/0 1 0 0 1 0 0 SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
g0052 0/0 1 0 0 1 0 0 SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
g0053 0/0 1 1 0 0 0 0 SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
g0054 0/0 1 0 0 1 0 0 SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
g0055 0/0 1 0 1 0 0 0 SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
g0056 0/0 1 1 0 0 0 0 SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
g0057 0/0 1 1 0 0 0 0 SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
g0058 0/0 1 1 0 0 0 0 SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
g0059 0/0 1 1 0 0 0 0 SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
g0060 0/0 1 1 0 0 0 0 SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
g0061 0/0 1 1 0 0 0 0 SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
g0062 0/0 1 0 1 0 0 0 SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
g0063 0/0 1 0 0 1 0 0 SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
g0064 0/0 1 0 1 0 0 0 SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
g0065 0/0 1 0 0 1 0 0 SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
g0066 0/0 1 0 0 1 0 0 SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
g0067 0/0 1 0 0 1 0 0 SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
g0068 0/0 1 0 0 0 0 1 SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
g0069 0/0 1 0 0 0 0 1 SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
g0070 0/0 1 0 0 1 0 0 SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
g0071 0/0 1 0 1 0 0 0 SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
g0072 0/0 1 0 0 1 0 0 SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
g0073 0/0 1 0 0 1 0 0 SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
g0074 0/0 1 1 0 0 0 0 SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
g0075 0/0 1 0 1 0 0 0 SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
g0076 0/0 1 0 1 0 0 0 SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
g0077 0/0 1 0 1 0 0 0 SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
g0078 0/0 1 1 0 0 0 0 SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
g0079 0/0 1 0 1 0 0 0 SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
g0080 0/0 1 0 0 0 0 1 SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
g0081 0/0 1 0 0 1 0 0 SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
g0082 0/0 1 0 0 0 0 1 SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
g0083 0/0 1 1 0 0 0 0 SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
g0084 0/0 1 0 0 1 0 0 SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
g0085 0/0 1 0 0 1 0 0 SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
g0086 0/0 1 0 0 1 0 0 SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
g0087 0/0 1 0 0 0 0 1 SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
g0088 0/0 1 0 0 1 0 0 SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
g0089 0/0 1 0 0 1 0 0 SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
g0090 0/0 1 0 0 1 0 0 SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
g0091 0/0 1 0 0 1 0 0 SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
g0092 0/0 1 1 0 0 0 0 SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
g0093 0/0 1 0 0 1 0 0 SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
g0094 0/0 1 0 0 0 0 1 SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
g0095 0/0 1 1 0 0 0 0 SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
g0096 0/0 1 0 0 1 0 0 SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
g0097 0/0 1 0 1 0 0 0 SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
g0098 0/0 1 0 0 0 0 1 SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
g0099 0/0 1 0 0 0 0 1 SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
g0100 0/0 1 0 1 0 0 0 SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
g0101 0/0 1 0 0 0 0 1 SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
g0102 0/0 1 1 0 0 0 0 SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
g0103 0/0 1 1 0 0 0 0 SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
g0104 0/0 1 1 0 0 0 0 SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
g0105 0/0 1 1 0 0 0 0 SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334

achapid grch38/
chm13v2 		alen clen total AFR AMR EAS EUR SAS regionname genename cseq chr start end
a0001c0001 1/1 489 291 69 60 122 9 29 SNX12_chrX_71054247_71073334 SNX12 copy fasta chrX 71054247 71073334
a0001c0002 0/0 489 17 5 2 9 0 1 SNX12_chrX_71054247_71073334 SNX12 copy fasta chrX 71054247 71073334
a0002c0003 0/0 489 1 0 0 1 0 0 SNX12_chrX_71054247_71073334 SNX12 copy fasta chrX 71054247 71073334

acthapid grch38
chm13v2 		tlen total AFR AMR EAS EUR SAS regionname genename tseq chr start end
a0001c0001t0001 0/1 2286 152 56 36 42 5 12 SNX12_chrX_71054247_71073334 SNX12 copy fasta chrX 71054247 71073334
a0001c0001t0002 1/0 2286 121 8 19 76 3 14 SNX12_chrX_71054247_71073334 SNX12 copy fasta chrX 71054247 71073334
a0001c0001t0004 0/0 2286 5 0 3 0 1 1 SNX12_chrX_71054247_71073334 SNX12 copy fasta chrX 71054247 71073334
a0001c0001t0005 0/0 2286 3 3 0 0 0 0 SNX12_chrX_71054247_71073334 SNX12 copy fasta chrX 71054247 71073334
a0001c0001t0006 0/0 2286 2 0 2 0 0 0 SNX12_chrX_71054247_71073334 SNX12 copy fasta chrX 71054247 71073334
a0001c0001t0008 0/0 2286 1 0 0 0 0 1 SNX12_chrX_71054247_71073334 SNX12 copy fasta chrX 71054247 71073334
a0001c0001t0009 0/0 2286 1 1 0 0 0 0 SNX12_chrX_71054247_71073334 SNX12 copy fasta chrX 71054247 71073334
a0001c0001t0010 0/0 2286 1 1 0 0 0 0 SNX12_chrX_71054247_71073334 SNX12 copy fasta chrX 71054247 71073334
a0001c0001t0011 0/0 2286 1 0 0 1 0 0 SNX12_chrX_71054247_71073334 SNX12 copy fasta chrX 71054247 71073334
a0001c0001t0012 0/0 2286 1 0 0 1 0 0 SNX12_chrX_71054247_71073334 SNX12 copy fasta chrX 71054247 71073334
a0001c0001t0013 0/0 2287 1 0 0 1 0 0 SNX12_chrX_71054247_71073334 SNX12 copy fasta chrX 71054247 71073334
a0001c0001t0014 0/0 2286 1 0 0 0 0 1 SNX12_chrX_71054247_71073334 SNX12 copy fasta chrX 71054247 71073334
a0001c0001t0015 0/0 2287 1 0 0 1 0 0 SNX12_chrX_71054247_71073334 SNX12 copy fasta chrX 71054247 71073334
a0001c0002t0003 0/0 2286 16 5 2 8 0 1 SNX12_chrX_71054247_71073334 SNX12 copy fasta chrX 71054247 71073334
a0001c0002t0007 0/0 2290 1 0 0 1 0 0 SNX12_chrX_71054247_71073334 SNX12 copy fasta chrX 71054247 71073334
a0002c0003t0002 0/0 2286 1 0 0 1 0 0 SNX12_chrX_71054247_71073334 SNX12 copy fasta chrX 71054247 71073334

actghapid grch38/
chm13v2 		total AFR AMR EAS EUR SAS regionname genename chr start end
a0001c0001t0001g0002 0/0 30 0 15 14 0 1 SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
a0001c0001t0001g0003 0/1 23 15 2 0 2 3 SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
a0001c0001t0001g0005 0/0 10 0 0 9 0 1 SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
a0001c0001t0001g0006 0/0 8 8 0 0 0 0 SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
a0001c0001t0001g0007 0/0 7 0 5 0 2 0 SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
a0001c0001t0001g0011 0/0 5 5 0 0 0 0 SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
a0001c0001t0001g0013 0/0 4 0 3 1 0 0 SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
a0001c0001t0001g0014 0/0 4 0 1 3 0 0 SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
a0001c0001t0001g0015 0/0 3 0 2 1 0 0 SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
a0001c0001t0001g0016 0/0 3 3 0 0 0 0 SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
a0001c0001t0001g0019 0/0 3 2 0 0 1 0 SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
a0001c0001t0001g0020 0/0 3 3 0 0 0 0 SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
a0001c0001t0001g0022 0/0 2 2 0 0 0 0 SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
a0001c0001t0001g0024 0/0 2 1 0 1 0 0 SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
a0001c0001t0001g0027 0/0 2 0 0 2 0 0 SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
a0001c0001t0001g0028 0/0 2 0 0 2 0 0 SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
a0001c0001t0001g0029 0/0 2 0 0 2 0 0 SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
a0001c0001t0001g0030 0/0 1 0 0 0 0 1 SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
a0001c0001t0001g0031 0/0 1 0 0 1 0 0 SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
a0001c0001t0001g0033 0/0 1 1 0 0 0 0 SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
a0001c0001t0001g0034 0/0 1 1 0 0 0 0 SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
a0001c0001t0001g0035 0/0 1 1 0 0 0 0 SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
a0001c0001t0001g0036 0/0 1 0 1 0 0 0 SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
a0001c0001t0001g0037 0/0 1 0 1 0 0 0 SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
a0001c0001t0001g0039 0/0 1 0 0 0 0 1 SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
a0001c0001t0001g0040 0/0 1 1 0 0 0 0 SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
a0001c0001t0001g0041 0/0 1 0 1 0 0 0 SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
a0001c0001t0001g0050 0/0 1 1 0 0 0 0 SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
a0001c0001t0001g0051 0/0 1 0 0 1 0 0 SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
a0001c0001t0001g0054 0/0 1 0 0 1 0 0 SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
a0001c0001t0001g0056 0/0 1 1 0 0 0 0 SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
a0001c0001t0001g0057 0/0 1 1 0 0 0 0 SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
a0001c0001t0001g0058 0/0 1 1 0 0 0 0 SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
a0001c0001t0001g0059 0/0 1 1 0 0 0 0 SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
a0001c0001t0001g0061 0/0 1 1 0 0 0 0 SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
a0001c0001t0001g0062 0/0 1 0 1 0 0 0 SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
a0001c0001t0001g0073 0/0 1 0 0 1 0 0 SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
a0001c0001t0001g0075 0/0 1 0 1 0 0 0 SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
a0001c0001t0001g0076 0/0 1 0 1 0 0 0 SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
a0001c0001t0001g0077 0/0 1 0 1 0 0 0 SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
a0001c0001t0001g0078 0/0 1 1 0 0 0 0 SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
a0001c0001t0001g0080 0/0 1 0 0 0 0 1 SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
a0001c0001t0001g0087 0/0 1 0 0 0 0 1 SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
a0001c0001t0001g0088 0/0 1 0 0 1 0 0 SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
a0001c0001t0001g0091 0/0 1 0 0 1 0 0 SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
a0001c0001t0001g0092 0/0 1 1 0 0 0 0 SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
a0001c0001t0001g0093 0/0 1 0 0 1 0 0 SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
a0001c0001t0001g0095 0/0 1 1 0 0 0 0 SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
a0001c0001t0001g0097 0/0 1 0 1 0 0 0 SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
a0001c0001t0001g0098 0/0 1 0 0 0 0 1 SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
a0001c0001t0001g0099 0/0 1 0 0 0 0 1 SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
a0001c0001t0001g0101 0/0 1 0 0 0 0 1 SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
a0001c0001t0001g0102 0/0 1 1 0 0 0 0 SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
a0001c0001t0001g0103 0/0 1 1 0 0 0 0 SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
a0001c0001t0001g0104 0/0 1 1 0 0 0 0 SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
a0001c0001t0001g0105 0/0 1 1 0 0 0 0 SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
a0001c0001t0002g0001 1/0 72 2 8 48 3 10 SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
a0001c0001t0002g0004 0/0 10 1 4 5 0 0 SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
a0001c0001t0002g0008 0/0 7 3 1 2 0 1 SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
a0001c0001t0002g0009 0/0 7 0 1 6 0 0 SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
a0001c0001t0002g0018 0/0 3 0 0 3 0 0 SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
a0001c0001t0002g0021 0/0 2 0 1 1 0 0 SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
a0001c0001t0002g0025 0/0 2 1 1 0 0 0 SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
a0001c0001t0002g0026 0/0 2 0 0 1 0 1 SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
a0001c0001t0002g0032 0/0 1 0 0 1 0 0 SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
a0001c0001t0002g0049 0/0 1 0 0 1 0 0 SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
a0001c0001t0002g0052 0/0 1 0 0 1 0 0 SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
a0001c0001t0002g0060 0/0 1 1 0 0 0 0 SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
a0001c0001t0002g0063 0/0 1 0 0 1 0 0 SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
a0001c0001t0002g0064 0/0 1 0 1 0 0 0 SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
a0001c0001t0002g0065 0/0 1 0 0 1 0 0 SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
a0001c0001t0002g0068 0/0 1 0 0 0 0 1 SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
a0001c0001t0002g0070 0/0 1 0 0 1 0 0 SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
a0001c0001t0002g0072 0/0 1 0 0 1 0 0 SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
a0001c0001t0002g0079 0/0 1 0 1 0 0 0 SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
a0001c0001t0002g0081 0/0 1 0 0 1 0 0 SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
a0001c0001t0002g0082 0/0 1 0 0 0 0 1 SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
a0001c0001t0002g0085 0/0 1 0 0 1 0 0 SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
a0001c0001t0002g0086 0/0 1 0 0 1 0 0 SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
a0001c0001t0002g0100 0/0 1 0 1 0 0 0 SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
a0001c0001t0004g0012 0/0 4 0 2 0 1 1 SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
a0001c0001t0004g0038 0/0 1 0 1 0 0 0 SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
a0001c0001t0005g0023 0/0 2 2 0 0 0 0 SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
a0001c0001t0005g0074 0/0 1 1 0 0 0 0 SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
a0001c0001t0006g0055 0/0 1 0 1 0 0 0 SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
a0001c0001t0006g0071 0/0 1 0 1 0 0 0 SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
a0001c0001t0008g0069 0/0 1 0 0 0 0 1 SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
a0001c0001t0009g0053 0/0 1 1 0 0 0 0 SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
a0001c0001t0010g0083 0/0 1 1 0 0 0 0 SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
a0001c0001t0011g0096 0/0 1 0 0 1 0 0 SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
a0001c0001t0012g0067 0/0 1 0 0 1 0 0 SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
a0001c0001t0013g0089 0/0 1 0 0 1 0 0 SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
a0001c0001t0014g0094 0/0 1 0 0 0 0 1 SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
a0001c0001t0015g0090 0/0 1 0 0 1 0 0 SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
a0001c0002t0003g0010 0/0 6 0 0 6 0 0 SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
a0001c0002t0003g0017 0/0 3 2 1 0 0 0 SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
a0001c0002t0003g0043 0/0 1 0 1 0 0 0 SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
a0001c0002t0003g0044 0/0 1 0 0 1 0 0 SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
a0001c0002t0003g0045 0/0 1 1 0 0 0 0 SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
a0001c0002t0003g0046 0/0 1 1 0 0 0 0 SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
a0001c0002t0003g0047 0/0 1 1 0 0 0 0 SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
a0001c0002t0003g0048 0/0 1 0 0 0 0 1 SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
a0001c0002t0003g0084 0/0 1 0 0 1 0 0 SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
a0001c0002t0007g0042 0/0 1 0 0 1 0 0 SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
a0002c0003t0002g0066 0/0 1 0 0 1 0 0 SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334

sampleid ID
haplotypeid
 ahapid chapid thapid ghapid gpopname popname regionname genename chr start end
HG00099 hp1 a0001 c0001 t0004 g0012 EUR GBR SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
HG00099 hp2 a0001 c0001 t0001 g0003 EUR GBR SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
HG00140 hp1 a0001 c0001 t0001 g0007 EUR GBR SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
HG00280 hp1 a0001 c0001 t0002 g0001 EUR FIN SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
HG00323 hp1 a0001 c0001 t0002 g0001 EUR FIN SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
HG00323 hp2 a0001 c0001 t0001 g0019 EUR FIN SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
HG00408 hp1 a0001 c0001 t0002 g0001 EAS CHS SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
HG00408 hp2 a0001 c0001 t0002 g0001 EAS CHS SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
HG00423 hp1 a0001 c0001 t0002 g0001 EAS CHS SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
HG00423 hp2 a0001 c0002 t0003 g0010 EAS CHS SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
HG00544 hp1 a0001 c0001 t0001 g0014 EAS CHS SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
HG00544 hp2 a0001 c0001 t0002 g0001 EAS CHS SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
HG00558 hp1 a0001 c0001 t0002 g0063 EAS CHS SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
HG00558 hp2 a0001 c0001 t0002 g0001 EAS CHS SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
HG00609 hp1 a0001 c0001 t0002 g0001 EAS CHS SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
HG00621 hp1 a0001 c0001 t0002 g0001 EAS CHS SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
HG00639 hp1 a0001 c0001 t0002 g0001 AMR PUR SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
HG00639 hp2 a0001 c0001 t0001 g0002 AMR PUR SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
HG00642 hp1 a0001 c0001 t0004 g0012 AMR PUR SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
HG00673 hp1 a0001 c0001 t0001 g0027 EAS CHS SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
HG00733 hp1 a0001 c0001 t0002 g0001 AMR PUR SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
HG00733 hp2 a0001 c0001 t0001 g0037 AMR PUR SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
HG00735 hp1 a0001 c0002 t0003 g0017 AMR PUR SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
HG00735 hp2 a0001 c0001 t0002 g0001 AMR PUR SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
HG00738 hp1 a0001 c0001 t0001 g0041 AMR PUR SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
HG00741 hp1 a0001 c0001 t0001 g0003 AMR PUR SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
HG00741 hp2 a0001 c0001 t0002 g0064 AMR PUR SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
HG01069 hp1 a0001 c0001 t0001 g0015 AMR PUR SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
HG01070 hp1 a0001 c0001 t0001 g0036 AMR PUR SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
HG01070 hp2 a0001 c0001 t0002 g0004 AMR PUR SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
HG01071 hp1 a0001 c0001 t0002 g0001 AMR PUR SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
HG01071 hp2 a0001 c0001 t0001 g0015 AMR PUR SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
HG01074 hp1 a0001 c0001 t0002 g0001 AMR PUR SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
HG01081 hp1 a0001 c0001 t0001 g0007 AMR PUR SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
HG01081 hp2 a0001 c0002 t0003 g0043 AMR PUR SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
HG01099 hp1 a0001 c0001 t0001 g0007 AMR PUR SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
HG01106 hp1 a0001 c0001 t0001 g0007 AMR PUR SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
HG01109 hp1 a0001 c0001 t0001 g0077 AMR PUR SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
HG01167 hp1 a0001 c0001 t0006 g0071 AMR PUR SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
HG01168 hp1 a0001 c0001 t0001 g0002 AMR PUR SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
HG01168 hp2 a0001 c0001 t0004 g0038 AMR PUR SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
HG01169 hp1 a0001 c0001 t0001 g0013 AMR PUR SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
HG01169 hp2 a0001 c0001 t0006 g0055 AMR PUR SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
HG01175 hp1 a0001 c0001 t0001 g0003 AMR PUR SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
HG01175 hp2 a0001 c0001 t0001 g0007 AMR PUR SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
HG01192 hp1 a0001 c0001 t0001 g0007 AMR PUR SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
HG01243 hp1 a0001 c0001 t0002 g0079 AMR PUR SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
HG01255 hp1 a0001 c0001 t0002 g0025 AMR CLM SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
HG01256 hp1 a0001 c0001 t0001 g0013 AMR CLM SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
HG01257 hp1 a0001 c0001 t0002 g0004 AMR CLM SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
HG01257 hp2 a0001 c0001 t0001 g0076 AMR CLM SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
HG01258 hp1 a0001 c0001 t0001 g0002 AMR CLM SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
HG01261 hp1 a0001 c0001 t0002 g0100 AMR CLM SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
HG01358 hp1 a0001 c0001 t0002 g0004 AMR CLM SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
HG01361 hp1 a0001 c0001 t0002 g0009 AMR CLM SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
HG01361 hp2 a0001 c0001 t0001 g0002 AMR CLM SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
HG01433 hp1 a0001 c0001 t0001 g0097 AMR CLM SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
HG01496 hp1 a0001 c0001 t0001 g0002 AMR CLM SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
HG01496 hp2 a0001 c0001 t0002 g0001 AMR CLM SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
HG01515 hp1 a0001 c0001 t0002 g0001 EUR IBS SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
HG01884 hp1 a0001 c0001 t0010 g0083 AFR ACB SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
HG01884 hp2 a0001 c0001 t0001 g0024 AFR ACB SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
HG01891 hp1 a0001 c0001 t0001 g0011 AFR ACB SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
HG01891 hp2 a0001 c0001 t0001 g0003 AFR ACB SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
HG01928 hp1 a0001 c0001 t0002 g0008 AMR PEL SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
HG01934 hp1 a0001 c0001 t0001 g0002 AMR PEL SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
HG01943 hp1 a0001 c0001 t0001 g0002 AMR PEL SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
HG01952 hp1 a0001 c0001 t0001 g0002 AMR PEL SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
HG01975 hp1 a0001 c0001 t0001 g0002 AMR PEL SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
HG01975 hp2 a0001 c0001 t0002 g0004 AMR PEL SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
HG01978 hp1 a0001 c0001 t0002 g0001 AMR PEL SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
HG01978 hp2 a0001 c0001 t0001 g0062 AMR PEL SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
HG01981 hp1 a0001 c0001 t0001 g0002 AMR PEL SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
HG01981 hp2 a0001 c0001 t0001 g0002 AMR PEL SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
HG01993 hp1 a0001 c0001 t0001 g0002 AMR PEL SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
HG01993 hp2 a0001 c0001 t0002 g0021 AMR PEL SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
HG02015 hp1 a0001 c0001 t0001 g0024 EAS KHV SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
HG02027 hp1 a0001 c0001 t0002 g0001 EAS KHV SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
HG02040 hp1 a0001 c0001 t0002 g0001 EAS KHV SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
HG02055 hp1 a0001 c0001 t0001 g0006 AFR ACB SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
HG02056 hp1 a0001 c0001 t0001 g0014 EAS KHV SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
HG02071 hp1 a0001 c0001 t0002 g0018 EAS KHV SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
HG02074 hp1 a0001 c0001 t0001 g0015 EAS KHV SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
HG02080 hp1 a0001 c0001 t0002 g0001 EAS KHV SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
HG02080 hp2 a0001 c0001 t0001 g0002 EAS KHV SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
HG02083 hp1 a0001 c0001 t0002 g0001 EAS KHV SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
HG02129 hp1 a0001 c0001 t0002 g0001 EAS KHV SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
HG02132 hp1 a0001 c0001 t0002 g0001 EAS KHV SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
HG02135 hp1 a0001 c0001 t0002 g0001 EAS KHV SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
HG02145 hp1 a0001 c0001 t0005 g0023 AFR ACB SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
HG02148 hp1 a0001 c0001 t0001 g0075 AMR PEL SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
HG02148 hp2 a0001 c0001 t0001 g0014 AMR PEL SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
HG02155 hp1 a0001 c0001 t0001 g0002 EAS CDX SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
HG02155 hp2 a0001 c0001 t0001 g0031 EAS CDX SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
HG02165 hp1 a0001 c0001 t0001 g0002 EAS CDX SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
HG02165 hp2 a0001 c0001 t0001 g0005 EAS CDX SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
HG02258 hp1 a0001 c0001 t0001 g0035 AFR ACB SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
HG02273 hp1 a0001 c0001 t0001 g0013 AMR PEL SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
HG02273 hp2 a0001 c0001 t0001 g0002 AMR PEL SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
HG02280 hp1 a0001 c0001 t0001 g0057 AFR ACB SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
HG02280 hp2 a0001 c0001 t0001 g0006 AFR ACB SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
HG02293 hp1 a0001 c0001 t0001 g0002 AMR PEL SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
HG02293 hp2 a0001 c0001 t0002 g0001 AMR PEL SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
HG02451 hp1 a0001 c0001 t0001 g0056 AFR ACB SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
HG02451 hp2 a0001 c0001 t0002 g0001 AFR ACB SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
HG02523 hp1 a0001 c0001 t0001 g0005 EAS KHV SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
HG02523 hp2 a0001 c0001 t0002 g0001 EAS KHV SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
HG02572 hp1 a0001 c0001 t0001 g0011 AFR GWD SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
HG02602 hp1 a0001 c0001 t0002 g0001 SAS PJL SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
HG02622 hp1 a0001 c0001 t0001 g0006 AFR GWD SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
HG02622 hp2 a0001 c0001 t0001 g0003 AFR GWD SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
HG02630 hp1 a0001 c0001 t0001 g0016 AFR GWD SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
HG02630 hp2 a0001 c0001 t0001 g0040 AFR GWD SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
HG02647 hp1 a0001 c0001 t0001 g0020 AFR GWD SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
HG02683 hp1 a0001 c0001 t0001 g0039 SAS PJL SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
HG02683 hp2 a0001 c0001 t0001 g0080 SAS PJL SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
HG02698 hp1 a0001 c0001 t0001 g0003 SAS PJL SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
HG02717 hp1 a0001 c0001 t0002 g0008 AFR GWD SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
HG02735 hp1 a0001 c0001 t0002 g0001 SAS PJL SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
HG02738 hp1 a0001 c0001 t0002 g0082 SAS PJL SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
HG02809 hp1 a0001 c0001 t0001 g0020 AFR GWD SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
HG02809 hp2 a0001 c0001 t0009 g0053 AFR GWD SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
HG02886 hp1 a0001 c0001 t0001 g0033 AFR GWD SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
HG02886 hp2 a0001 c0001 t0001 g0006 AFR GWD SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
HG02895 hp1 a0001 c0001 t0001 g0019 AFR GWD SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
HG02896 hp1 a0001 c0001 t0001 g0102 AFR GWD SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
HG02896 hp2 a0001 c0001 t0001 g0011 AFR GWD SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
HG02897 hp1 a0001 c0001 t0001 g0011 AFR GWD SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
HG02897 hp2 a0001 c0001 t0001 g0003 AFR GWD SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
HG02922 hp1 a0001 c0001 t0001 g0003 AFR ESN SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
HG02922 hp2 a0001 c0001 t0002 g0004 AFR ESN SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
HG02965 hp1 a0001 c0001 t0001 g0003 AFR ESN SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
HG02970 hp1 a0001 c0002 t0003 g0017 AFR ESN SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
HG02970 hp2 a0001 c0001 t0001 g0103 AFR ESN SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
HG02976 hp1 a0001 c0001 t0001 g0105 AFR ESN SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
HG02976 hp2 a0001 c0001 t0002 g0008 AFR ESN SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
HG03017 hp1 a0001 c0001 t0001 g0087 SAS PJL SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
HG03041 hp1 a0001 c0001 t0005 g0074 AFR GWD SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
HG03041 hp2 a0001 c0001 t0001 g0003 AFR GWD SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
HG03098 hp1 a0001 c0001 t0002 g0025 AFR MSL SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
HG03130 hp1 a0001 c0001 t0001 g0059 AFR ESN SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
HG03139 hp1 a0001 c0001 t0001 g0020 AFR ESN SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
HG03195 hp1 a0001 c0002 t0003 g0017 AFR ESN SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
HG03195 hp2 a0001 c0001 t0001 g0006 AFR ESN SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
HG03209 hp1 a0001 c0001 t0001 g0011 AFR MSL SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
HG03225 hp1 a0001 c0001 t0001 g0003 AFR MSL SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
HG03239 hp1 a0001 c0001 t0002 g0026 SAS PJL SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
HG03239 hp2 a0001 c0001 t0001 g0003 SAS PJL SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
HG03453 hp1 a0001 c0001 t0001 g0022 AFR MSL SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
HG03453 hp2 a0001 c0001 t0005 g0023 AFR MSL SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
HG03486 hp1 a0001 c0001 t0001 g0003 AFR MSL SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
HG03486 hp2 a0001 c0001 t0001 g0058 AFR MSL SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
HG03490 hp1 a0001 c0001 t0001 g0030 SAS PJL SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
HG03491 hp1 a0001 c0001 t0002 g0001 SAS PJL SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
HG03491 hp2 a0001 c0001 t0002 g0001 SAS PJL SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
HG03492 hp1 a0001 c0001 t0002 g0001 SAS PJL SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
HG03516 hp1 a0001 c0001 t0001 g0050 AFR ESN SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
HG03516 hp2 a0001 c0002 t0003 g0046 AFR ESN SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
HG03540 hp1 a0001 c0001 t0001 g0003 AFR GWD SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
HG03540 hp2 a0001 c0001 t0001 g0022 AFR GWD SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
HG03579 hp1 a0001 c0001 t0001 g0016 AFR MSL SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
HG03654 hp1 a0001 c0001 t0001 g0005 SAS PJL SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
HG03669 hp1 a0001 c0001 t0002 g0001 SAS PJL SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
HG03669 hp2 a0001 c0001 t0004 g0012 SAS PJL SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
HG03688 hp1 a0001 c0001 t0002 g0001 SAS STU SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
HG03710 hp1 a0001 c0001 t0001 g0099 SAS PJL SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
HG03831 hp1 a0001 c0001 t0001 g0101 SAS BEB SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
HG03831 hp2 a0001 c0001 t0002 g0008 SAS BEB SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
HG03834 hp1 a0001 c0002 t0003 g0048 SAS BEB SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
HG03834 hp2 a0001 c0001 t0001 g0003 SAS BEB SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
HG03942 hp1 a0001 c0001 t0001 g0098 SAS BEB SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
HG04115 hp1 a0001 c0001 t0001 g0002 SAS STU SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
HG04184 hp1 a0001 c0001 t0002 g0068 SAS BEB SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
HG04184 hp2 a0001 c0001 t0014 g0094 SAS BEB SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
HG04199 hp1 a0001 c0001 t0008 g0069 SAS STU SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
HG04204 hp1 a0001 c0001 t0002 g0001 SAS STU SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
HG04228 hp1 a0001 c0001 t0002 g0001 SAS STU SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
NA18522 hp1 a0001 c0001 t0001 g0034 AFR YRI SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
NA18612 hp1 a0001 c0001 t0002 g0004 EAS CHB SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
NA18747 hp1 a0001 c0001 t0002 g0001 EAS CHB SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
NA18906 hp1 a0001 c0001 t0001 g0095 AFR YRI SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
NA18906 hp2 a0001 c0001 t0002 g0060 AFR YRI SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
NA18939 hp1 a0001 c0001 t0001 g0002 EAS JPT SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
NA18939 hp2 a0001 c0001 t0002 g0001 EAS JPT SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
NA18940 hp1 a0001 c0001 t0002 g0021 EAS JPT SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
NA18941 hp1 a0001 c0001 t0002 g0009 EAS JPT SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
NA18941 hp2 a0001 c0001 t0001 g0005 EAS JPT SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
NA18942 hp1 a0001 c0001 t0001 g0002 EAS JPT SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
NA18942 hp2 a0001 c0001 t0002 g0004 EAS JPT SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
NA18943 hp1 a0001 c0001 t0002 g0026 EAS JPT SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
NA18944 hp1 a0001 c0001 t0002 g0001 EAS JPT SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
NA18945 hp1 a0001 c0001 t0001 g0002 EAS JPT SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
NA18946 hp1 a0001 c0001 t0002 g0001 EAS JPT SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
NA18946 hp2 a0001 c0001 t0002 g0001 EAS JPT SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
NA18947 hp1 a0001 c0001 t0002 g0001 EAS JPT SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
NA18947 hp2 a0001 c0001 t0001 g0093 EAS JPT SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
NA18948 hp1 a0001 c0001 t0002 g0001 EAS JPT SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
NA18950 hp1 a0001 c0001 t0001 g0002 EAS JPT SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
NA18950 hp2 a0001 c0001 t0002 g0001 EAS JPT SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
NA18951 hp1 a0001 c0001 t0002 g0008 EAS JPT SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
NA18951 hp2 a0001 c0001 t0001 g0054 EAS JPT SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
NA18952 hp1 a0001 c0002 t0003 g0010 EAS JPT SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
NA18953 hp1 a0001 c0001 t0001 g0002 EAS JPT SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
NA18957 hp1 a0001 c0001 t0001 g0005 EAS JPT SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
NA18957 hp2 a0001 c0001 t0001 g0002 EAS JPT SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
NA18959 hp1 a0001 c0001 t0002 g0004 EAS JPT SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
NA18960 hp1 a0001 c0001 t0002 g0009 EAS JPT SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
NA18961 hp1 a0001 c0001 t0002 g0070 EAS JPT SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
NA18962 hp1 a0001 c0001 t0002 g0001 EAS JPT SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
NA18965 hp1 a0001 c0001 t0001 g0073 EAS JPT SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
NA18966 hp1 a0001 c0001 t0002 g0086 EAS JPT SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
NA18967 hp1 a0001 c0001 t0002 g0032 EAS JPT SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
NA18968 hp1 a0001 c0001 t0001 g0029 EAS JPT SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
NA18968 hp2 a0001 c0001 t0002 g0081 EAS JPT SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
NA18969 hp1 a0001 c0001 t0002 g0001 EAS JPT SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
NA18969 hp2 a0001 c0001 t0002 g0009 EAS JPT SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
NA18970 hp1 a0001 c0001 t0002 g0009 EAS JPT SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
NA18971 hp1 a0001 c0001 t0002 g0001 EAS JPT SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
NA18974 hp1 a0001 c0001 t0001 g0013 EAS JPT SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
NA18977 hp1 a0001 c0001 t0002 g0018 EAS JPT SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
NA18978 hp1 a0001 c0001 t0002 g0001 EAS JPT SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
NA18978 hp2 a0001 c0001 t0002 g0009 EAS JPT SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
NA18980 hp1 a0001 c0002 t0003 g0010 EAS JPT SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
NA18980 hp2 a0001 c0001 t0001 g0005 EAS JPT SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
NA18981 hp1 a0001 c0001 t0002 g0004 EAS JPT SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
NA18981 hp2 a0001 c0001 t0001 g0005 EAS JPT SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
NA18982 hp1 a0001 c0001 t0002 g0001 EAS JPT SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
NA18983 hp1 a0001 c0001 t0002 g0065 EAS JPT SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
NA18984 hp1 a0001 c0001 t0002 g0001 EAS JPT SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
NA18986 hp1 a0001 c0001 t0002 g0001 EAS JPT SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
NA18988 hp1 a0001 c0001 t0001 g0091 EAS JPT SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
NA18989 hp1 a0001 c0001 t0002 g0004 EAS JPT SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
NA18990 hp1 a0001 c0001 t0002 g0001 EAS JPT SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
NA18991 hp1 a0001 c0001 t0001 g0027 EAS JPT SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
NA18991 hp2 a0001 c0001 t0002 g0001 EAS JPT SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
NA18993 hp1 a0001 c0001 t0001 g0014 EAS JPT SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
NA18993 hp2 a0001 c0001 t0002 g0001 EAS JPT SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
NA18994 hp1 a0001 c0001 t0002 g0052 EAS JPT SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
NA18995 hp1 a0001 c0001 t0002 g0001 EAS JPT SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
NA18999 hp1 a0001 c0002 t0003 g0010 EAS JPT SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
NA18999 hp2 a0001 c0001 t0001 g0088 EAS JPT SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
NA19000 hp1 a0001 c0001 t0002 g0001 EAS JPT SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
NA19004 hp1 a0001 c0001 t0002 g0001 EAS JPT SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
NA19005 hp1 a0001 c0001 t0001 g0002 EAS JPT SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
NA19006 hp1 a0001 c0001 t0002 g0001 EAS JPT SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
NA19007 hp1 a0001 c0001 t0001 g0002 EAS JPT SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
NA19009 hp1 a0001 c0002 t0003 g0010 EAS JPT SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
NA19012 hp1 a0001 c0002 t0003 g0044 EAS JPT SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
NA19030 hp1 a0001 c0001 t0001 g0003 AFR LWK SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
NA19030 hp2 a0001 c0001 t0001 g0006 AFR LWK SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
NA19043 hp1 a0001 c0001 t0001 g0019 AFR LWK SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
NA19054 hp1 a0001 c0001 t0001 g0002 EAS JPT SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
NA19054 hp2 a0001 c0001 t0002 g0001 EAS JPT SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
NA19055 hp1 a0001 c0001 t0002 g0001 EAS JPT SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
NA19056 hp1 a0001 c0001 t0001 g0002 EAS JPT SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
NA19058 hp1 a0001 c0001 t0011 g0096 EAS JPT SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
NA19062 hp1 a0001 c0001 t0002 g0001 EAS JPT SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
NA19063 hp1 a0001 c0001 t0002 g0085 EAS JPT SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
NA19064 hp1 a0001 c0001 t0002 g0001 EAS JPT SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
NA19064 hp2 a0001 c0001 t0001 g0002 EAS JPT SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
NA19066 hp1 a0001 c0001 t0001 g0028 EAS JPT SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
NA19067 hp1 a0001 c0001 t0013 g0089 EAS JPT SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
NA19068 hp1 a0001 c0001 t0002 g0001 EAS JPT SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
NA19070 hp1 a0001 c0001 t0002 g0001 EAS JPT SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
NA19072 hp1 a0001 c0001 t0002 g0072 EAS JPT SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
NA19074 hp1 a0001 c0001 t0012 g0067 EAS JPT SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
NA19074 hp2 a0001 c0001 t0002 g0001 EAS JPT SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
NA19075 hp1 a0001 c0001 t0002 g0018 EAS JPT SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
NA19076 hp1 a0001 c0001 t0001 g0051 EAS JPT SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
NA19078 hp1 a0001 c0001 t0001 g0005 EAS JPT SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
NA19078 hp2 a0001 c0001 t0002 g0049 EAS JPT SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
NA19079 hp1 a0001 c0001 t0001 g0028 EAS JPT SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
NA19081 hp1 a0001 c0001 t0002 g0001 EAS JPT SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
NA19081 hp2 a0001 c0002 t0003 g0084 EAS JPT SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
NA19082 hp1 a0001 c0001 t0002 g0009 EAS JPT SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
NA19083 hp1 a0001 c0001 t0001 g0005 EAS JPT SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
NA19085 hp1 a0001 c0001 t0002 g0001 EAS JPT SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
NA19086 hp1 a0001 c0001 t0002 g0008 EAS JPT SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
NA19087 hp1 a0002 c0003 t0002 g0066 EAS JPT SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
NA19087 hp2 a0001 c0002 t0003 g0010 EAS JPT SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
NA19088 hp1 a0001 c0001 t0001 g0029 EAS JPT SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
NA19089 hp1 a0001 c0002 t0007 g0042 EAS JPT SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
NA19090 hp1 a0001 c0001 t0001 g0005 EAS JPT SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
NA19090 hp2 a0001 c0001 t0015 g0090 EAS JPT SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
NA19091 hp1 a0001 c0001 t0002 g0001 EAS JPT SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
NA19240 hp1 a0001 c0002 t0003 g0047 AFR YRI SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
NA19240 hp2 a0001 c0001 t0002 g0008 AFR YRI SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
NA20129 hp1 a0001 c0001 t0001 g0078 AFR ASW SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
NA20129 hp2 a0001 c0001 t0001 g0006 AFR ASW SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
NA20752 hp1 a0001 c0001 t0001 g0003 EUR TSI SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
NA20805 hp1 a0001 c0001 t0001 g0007 EUR TSI SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
NA20905 hp1 a0001 c0001 t0002 g0001 SAS GIH SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
HG01123 hp1 a0001 c0001 t0004 g0012 AMR CLM SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
HG01123 hp2 a0001 c0001 t0001 g0002 AMR CLM SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
HG02109 hp1 a0001 c0001 t0001 g0003 AFR ACB SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
HG02109 hp2 a0001 c0002 t0003 g0045 AFR ACB SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
HG02486 hp1 a0001 c0001 t0001 g0092 AFR ACB SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
HG02559 hp1 a0001 c0001 t0001 g0003 AFR ACB SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
HG02559 hp2 a0001 c0001 t0001 g0006 AFR ACB SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
HG03471 hp1 a0001 c0001 t0001 g0003 AFR MSL SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
HG06807 hp1 a0001 c0001 t0001 g0061 AFR USA SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
HG06807 hp2 a0001 c0001 t0001 g0003 AFR USA SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
NA18955 hp1 a0001 c0001 t0002 g0001 EAS JPT SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
NA20300 hp1 a0001 c0001 t0002 g0001 AFR USA SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
NA20300 hp2 a0001 c0001 t0001 g0003 AFR USA SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
NA21309 hp1 a0001 c0001 t0001 g0016 AFR LWK SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
NA21309 hp2 a0001 c0001 t0001 g0104 AFR LWK SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
homoSapiens_chm13v2 hp1 a0001 c0001 t0001 g0003 REF REF SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334
homoSapiens_grch38 hp1 a0001 c0001 t0002 g0001 REF REF SNX12_chrX_71054247_71073334 SNX12 chrX 71054247 71073334

chr:pos ref alt #
# of ahapid:amino-acid(protein) level
 ahapids #
# of haplotypeids
 haplotypeids annotation impact hgvs_c hgvs_p genename geneid featuretype featureid transcript_biotype rank cdna
cdna pos length
 cds
cds pos length
 aa
aa pos length
 distance status chr pos
chrX:71061960 A
A
 T
T
 1 a0002
a0002
 1 NA19087.hp1
NA19087.hp1
 missense_variant MODERATE c.269T>A
c.269T>A
 p.Val90Glu
p.Val90Glu
 SNX12 ENSG00000147164.12 transcript ENST00000374274.8 protein_coding 3/4 297/2286 269/489 90/162 chrX 71061960

chr:pos ref alt #
# of chapid
 chapids #
# of haplotypeids
 haplotypeids annotation impact hgvs_c hgvs_p genename geneid featuretype featureid transcript_biotype rank cdna
cdna pos length
 cds
cds pos length
 aa
aa pos length
 distance status chr pos
chrX:71062914 G
G
 A
A
 1 a0001c0002
a0001c0002
 17 HG00423.hp2
HG00735.hp1
HG01081.hp2
others(14): Show 
HG00423.hp2
HG00735.hp1
HG01081.hp2
HG02109.hp2
HG02970.hp1
HG03195.hp1
HG03516.hp2
HG03834.hp1
NA18952.hp1
NA18980.hp1
NA18999.hp1
NA19009.hp1
NA19012.hp1
NA19081.hp2
NA19087.hp2
NA19089.hp1
NA19240.hp1
 synonymous_variant LOW c.201C>T
c.201C>T
 p.Cys67Cys
p.Cys67Cys
 SNX12 ENSG00000147164.12 transcript ENST00000374274.8 protein_coding 2/4 229/2286 201/489 67/162 chrX 71062914

chr:pos ref alt #
# of thapid:transcript level
 thapids #
# of haplotypeids
 haplotypeids annotation impact hgvs_c hgvs_p genename geneid featuretype featureid transcript_biotype rank cdna
cdna pos length
 cds
cds pos length
 aa
aa pos length
 distance status chr pos
chrX:71059277 T
T
 C
C
 1 a0001c0001t0012
a0001c0001t0012
 1 NA19074.hp1
NA19074.hp1
 3_prime_UTR_variant MODIFIER c.*1739A>G
c.*1739A>G
SNX12 ENSG00000147164.12 transcript ENST00000374274.8 protein_coding 4/4 1739 chrX 71059277
chrX:71059319 A
A
 G
G
 1 a0001c0001t0006
a0001c0001t0006
 2 HG01167.hp1
HG01169.hp2
HG01167.hp1
HG01169.hp2
 3_prime_UTR_variant MODIFIER c.*1697T>C
c.*1697T>C
SNX12 ENSG00000147164.12 transcript ENST00000374274.8 protein_coding 4/4 1697 chrX 71059319
chrX:71059322 A
A
 T
T
 1 a0001c0001t0004
a0001c0001t0004
 5 HG00099.hp1
HG00642.hp1
HG01123.hp1
others(2): Show 
HG00099.hp1
HG00642.hp1
HG01123.hp1
HG01168.hp2
HG03669.hp2
 3_prime_UTR_variant MODIFIER c.*1694T>A
c.*1694T>A
SNX12 ENSG00000147164.12 transcript ENST00000374274.8 protein_coding 4/4 1694 chrX 71059322
chrX:71059327 C
C
 G
G
 1 a0001c0001t0004
a0001c0001t0004
 5 HG00099.hp1
HG00642.hp1
HG01123.hp1
others(2): Show 
HG00099.hp1
HG00642.hp1
HG01123.hp1
HG01168.hp2
HG03669.hp2
 3_prime_UTR_variant MODIFIER c.*1689G>C
c.*1689G>C
SNX12 ENSG00000147164.12 transcript ENST00000374274.8 protein_coding 4/4 1689 chrX 71059327
chrX:71059362 G
G
 C
C
 1 a0001c0001t0011
a0001c0001t0011
 1 NA19058.hp1
NA19058.hp1
 3_prime_UTR_variant MODIFIER c.*1654C>G
c.*1654C>G
SNX12 ENSG00000147164.12 transcript ENST00000374274.8 protein_coding 4/4 1654 chrX 71059362
chrX:71059642 A
A
 C
C
 10 a0001c0001t0001
a0001c0001t0004
a0001c0001t0005
others(7): Show 
a0001c0001t0001
a0001c0001t0004
a0001c0001t0005
a0001c0001t0006
a0001c0001t0009
a0001c0001t0010
a0001c0001t0011
a0001c0001t0014
a0001c0002t0003
a0001c0002t0007
 183 HG00099.hp1
HG00099.hp2
HG00140.hp1
others(180): Show 
HG00099.hp1
HG00099.hp2
HG00140.hp1
HG00323.hp2
HG00423.hp2
HG00544.hp1
HG00639.hp2
HG00642.hp1
HG00673.hp1
HG00733.hp2
HG00735.hp1
HG00738.hp1
HG00741.hp1
HG01069.hp1
HG01070.hp1
HG01071.hp2
HG01081.hp1
HG01081.hp2
HG01099.hp1
HG01106.hp1
HG01109.hp1
HG01123.hp1
HG01123.hp2
HG01167.hp1
HG01168.hp1
HG01168.hp2
HG01169.hp1
HG01169.hp2
HG01175.hp1
HG01175.hp2
HG01192.hp1
HG01256.hp1
HG01257.hp2
HG01258.hp1
HG01361.hp2
HG01433.hp1
HG01496.hp1
HG01884.hp1
HG01884.hp2
HG01891.hp1
HG01891.hp2
HG01934.hp1
HG01943.hp1
HG01952.hp1
HG01975.hp1
HG01978.hp2
HG01981.hp1
HG01981.hp2
HG01993.hp1
HG02015.hp1
HG02055.hp1
HG02056.hp1
HG02074.hp1
HG02080.hp2
HG02109.hp1
HG02109.hp2
HG02145.hp1
HG02148.hp1
HG02148.hp2
HG02155.hp1
HG02155.hp2
HG02165.hp1
HG02165.hp2
HG02258.hp1
HG02273.hp1
HG02273.hp2
HG02280.hp1
HG02280.hp2
HG02293.hp1
HG02451.hp1
HG02486.hp1
HG02523.hp1
HG02559.hp1
HG02559.hp2
HG02572.hp1
HG02622.hp1
HG02622.hp2
HG02630.hp1
HG02630.hp2
HG02647.hp1
HG02683.hp1
HG02683.hp2
HG02698.hp1
HG02809.hp1
HG02809.hp2
HG02886.hp1
HG02886.hp2
HG02895.hp1
HG02896.hp1
HG02896.hp2
HG02897.hp1
HG02897.hp2
HG02922.hp1
HG02965.hp1
HG02970.hp1
HG02970.hp2
HG02976.hp1
HG03017.hp1
HG03041.hp1
HG03041.hp2
HG03130.hp1
HG03139.hp1
HG03195.hp1
HG03195.hp2
HG03209.hp1
HG03225.hp1
HG03239.hp2
HG03453.hp1
HG03453.hp2
HG03471.hp1
HG03486.hp1
HG03486.hp2
HG03490.hp1
HG03516.hp1
HG03516.hp2
HG03540.hp1
HG03540.hp2
HG03579.hp1
HG03654.hp1
HG03669.hp2
HG03710.hp1
HG03831.hp1
HG03834.hp1
HG03834.hp2
HG03942.hp1
HG04115.hp1
HG04184.hp2
HG06807.hp1
HG06807.hp2
NA18522.hp1
NA18906.hp1
NA18939.hp1
NA18941.hp2
NA18942.hp1
NA18945.hp1
NA18947.hp2
NA18950.hp1
NA18951.hp2
NA18952.hp1
NA18953.hp1
NA18957.hp1
NA18957.hp2
NA18965.hp1
NA18968.hp1
NA18974.hp1
NA18980.hp1
NA18980.hp2
NA18981.hp2
NA18988.hp1
NA18991.hp1
NA18993.hp1
NA18999.hp1
NA18999.hp2
NA19005.hp1
NA19007.hp1
NA19009.hp1
NA19012.hp1
NA19030.hp1
NA19030.hp2
NA19043.hp1
NA19054.hp1
NA19056.hp1
NA19058.hp1
NA19064.hp2
NA19066.hp1
NA19076.hp1
NA19078.hp1
NA19079.hp1
NA19081.hp2
NA19083.hp1
NA19087.hp2
NA19088.hp1
NA19089.hp1
NA19090.hp1
NA19240.hp1
NA20129.hp1
NA20129.hp2
NA20300.hp2
NA20752.hp1
NA20805.hp1
NA21309.hp1
NA21309.hp2
homoSapiens_chm13v2.hp1
 3_prime_UTR_variant MODIFIER c.*1374T>G
c.*1374T>G
SNX12 ENSG00000147164.12 transcript ENST00000374274.8 protein_coding 4/4 1374 chrX 71059642
chrX:71059742 C
C
 CACCA
CACCA
 1 a0001c0002t0007
a0001c0002t0007
 1 NA19089.hp1
NA19089.hp1
 3_prime_UTR_variant MODIFIER c.*1270_*1273dupTGGT
c.*1270_*1273dupTGGT
SNX12 ENSG00000147164.12 transcript ENST00000374274.8 protein_coding 4/4 1273 chrX 71059742
chrX:71059950 T
T
 TG
TG
 1 a0001c0001t0013
a0001c0001t0013
 1 NA19067.hp1
NA19067.hp1
 3_prime_UTR_variant MODIFIER c.*1065dupC
c.*1065dupC
SNX12 ENSG00000147164.12 transcript ENST00000374274.8 protein_coding 4/4 1065 chrX 71059950
chrX:71059962 CA
CA
 C
C
 1 a0001c0002t0007
a0001c0002t0007
 1 NA19089.hp1
NA19089.hp1
 3_prime_UTR_variant MODIFIER c.*1053delT
c.*1053delT
SNX12 ENSG00000147164.12 transcript ENST00000374274.8 protein_coding 4/4 1053 chrX 71059962
chrX:71060120 G
G
 T
T
 1 a0001c0001t0010
a0001c0001t0010
 1 HG01884.hp1
HG01884.hp1
 3_prime_UTR_variant MODIFIER c.*896C>A
c.*896C>A
SNX12 ENSG00000147164.12 transcript ENST00000374274.8 protein_coding 4/4 896 chrX 71060120
chrX:71060266 T
T
 A
A
 1 a0001c0001t0014
a0001c0001t0014
 1 HG04184.hp2
HG04184.hp2
 3_prime_UTR_variant MODIFIER c.*750A>T
c.*750A>T
SNX12 ENSG00000147164.12 transcript ENST00000374274.8 protein_coding 4/4 750 chrX 71060266
chrX:71060359 A
A
 G
G
 1 a0001c0001t0005
a0001c0001t0005
 3 HG02145.hp1
HG03041.hp1
HG03453.hp2
HG02145.hp1
HG03041.hp1
HG03453.hp2
 3_prime_UTR_variant MODIFIER c.*657T>C
c.*657T>C
SNX12 ENSG00000147164.12 transcript ENST00000374274.8 protein_coding 4/4 657 chrX 71060359
chrX:71060646 A
A
 G
G
 1 a0001c0001t0009
a0001c0001t0009
 1 HG02809.hp2
HG02809.hp2
 3_prime_UTR_variant MODIFIER c.*370T>C
c.*370T>C
SNX12 ENSG00000147164.12 transcript ENST00000374274.8 protein_coding 4/4 370 chrX 71060646
chrX:71060718 G
G
 A
A
 2 a0001c0002t0003
a0001c0002t0007
a0001c0002t0003
a0001c0002t0007
 17 HG00423.hp2
HG00735.hp1
HG01081.hp2
others(14): Show 
HG00423.hp2
HG00735.hp1
HG01081.hp2
HG02109.hp2
HG02970.hp1
HG03195.hp1
HG03516.hp2
HG03834.hp1
NA18952.hp1
NA18980.hp1
NA18999.hp1
NA19009.hp1
NA19012.hp1
NA19081.hp2
NA19087.hp2
NA19089.hp1
NA19240.hp1
 3_prime_UTR_variant MODIFIER c.*298C>T
c.*298C>T
SNX12 ENSG00000147164.12 transcript ENST00000374274.8 protein_coding 4/4 298 chrX 71060718
chrX:71060769 T
T
 TC
TC
 1 a0001c0001t0015
a0001c0001t0015
 1 NA19090.hp2
NA19090.hp2
 3_prime_UTR_variant MODIFIER c.*246dupG
c.*246dupG
SNX12 ENSG00000147164.12 transcript ENST00000374274.8 protein_coding 4/4 246 chrX 71060769
chrX:71060793 C
C
 T
T
 1 a0001c0001t0008
a0001c0001t0008
 1 HG04199.hp1
HG04199.hp1
 3_prime_UTR_variant MODIFIER c.*223G>A
c.*223G>A
SNX12 ENSG00000147164.12 transcript ENST00000374274.8 protein_coding 4/4 223 chrX 71060793
chrX:71060801 A
A
 AG
AG
 1 a0001c0002t0007
a0001c0002t0007
 1 NA19089.hp1
NA19089.hp1
 3_prime_UTR_variant MODIFIER c.*214dupC
c.*214dupC
SNX12 ENSG00000147164.12 transcript ENST00000374274.8 protein_coding 4/4 214 chrX 71060801

chr:pos ref alt #
# of ghapid:genebody level
 ghapids #
# of haplotypeids
 haplotypeids annotation impact hgvs_c hgvs_p genename geneid featuretype featureid genebody_biotype rank cdna
cdna pos length
 cds
cds pos length
 aa
aa pos length
 distance status chr pos
chrX:71061150 AT
AT
 A
A
 1 a0001c0002t0007g0042
a0001c0002t0007g0042
 1 NA19089.hp1
NA19089.hp1
 intron_variant MODIFIER c.387-33delA
c.387-33delA
SNX12 ENSG00000147164.12 transcript ENST00000374274.8 protein_coding 3/3 chrX 71061150
chrX:71061334 T
T
 C
C
 1 a0001c0001t0010g0083
a0001c0001t0010g0083
 1 HG01884.hp1
HG01884.hp1
 intron_variant MODIFIER c.387-216A>G
c.387-216A>G
SNX12 ENSG00000147164.12 transcript ENST00000374274.8 protein_coding 3/3 chrX 71061334
chrX:71061417 T
T
 TG
TG
 1 a0001c0002t0007g0042
a0001c0002t0007g0042
 1 NA19089.hp1
NA19089.hp1
 intron_variant MODIFIER c.387-300dupC
c.387-300dupC
SNX12 ENSG00000147164.12 transcript ENST00000374274.8 protein_coding 3/3 chrX 71061417
chrX:71061438 A
A
 G
G
 1 a0001c0001t0001g0105
a0001c0001t0001g0105
 1 HG02976.hp1
HG02976.hp1
 intron_variant MODIFIER c.387-320T>C
c.387-320T>C
SNX12 ENSG00000147164.12 transcript ENST00000374274.8 protein_coding 3/3 chrX 71061438
chrX:71061471 G
G
 A
A
 1 a0001c0001t0001g0075
a0001c0001t0001g0075
 1 HG02148.hp1
HG02148.hp1
 intron_variant MODIFIER c.387-353C>T
c.387-353C>T
SNX12 ENSG00000147164.12 transcript ENST00000374274.8 protein_coding 3/3 chrX 71061471
chrX:71061550 T
T
 C
C
 1 a0001c0002t0003g0043
a0001c0002t0003g0043
 1 HG01081.hp2
HG01081.hp2
 intron_variant MODIFIER c.386+293A>G
c.386+293A>G
SNX12 ENSG00000147164.12 transcript ENST00000374274.8 protein_coding 3/3 chrX 71061550
chrX:71061665 G
G
 A
A
 1 a0001c0001t0001g0031
a0001c0001t0001g0031
 1 HG02155.hp2
HG02155.hp2
 intron_variant MODIFIER c.386+178C>T
c.386+178C>T
SNX12 ENSG00000147164.12 transcript ENST00000374274.8 protein_coding 3/3 chrX 71061665
chrX:71061711 T
T
 G
G
 1 a0001c0001t0002g0068
a0001c0001t0002g0068
 1 HG04184.hp1
HG04184.hp1
 intron_variant MODIFIER c.386+132A>C
c.386+132A>C
SNX12 ENSG00000147164.12 transcript ENST00000374274.8 protein_coding 3/3 chrX 71061711
chrX:71061814 C
C
 T
T
 1 a0001c0001t0010g0083
a0001c0001t0010g0083
 1 HG01884.hp1
HG01884.hp1
 intron_variant MODIFIER c.386+29G>A
c.386+29G>A
SNX12 ENSG00000147164.12 transcript ENST00000374274.8 protein_coding 3/3 chrX 71061814
chrX:71062035 C
C
 T
T
 1 a0001c0001t0002g0065
a0001c0001t0002g0065
 1 NA18983.hp1
NA18983.hp1
 intron_variant MODIFIER c.262-68G>A
c.262-68G>A
SNX12 ENSG00000147164.12 transcript ENST00000374274.8 protein_coding 2/3 chrX 71062035
chrX:71062130 G
G
 C
C
 1 a0001c0001t0001g0029
a0001c0001t0001g0029
 2 NA18968.hp1
NA19088.hp1
NA18968.hp1
NA19088.hp1
 intron_variant MODIFIER c.262-163C>G
c.262-163C>G
SNX12 ENSG00000147164.12 transcript ENST00000374274.8 protein_coding 2/3 chrX 71062130
chrX:71062146 GT
GT
 G
G
 1 a0001c0001t0001g0091
a0001c0001t0001g0091
 1 NA18988.hp1
NA18988.hp1
 intron_variant MODIFIER c.262-180delA
c.262-180delA
SNX12 ENSG00000147164.12 transcript ENST00000374274.8 protein_coding 2/3 chrX 71062146
chrX:71062169 CCA
CCA
 C
C
 1 a0001c0001t0010g0083
a0001c0001t0010g0083
 1 HG01884.hp1
HG01884.hp1
 intron_variant MODIFIER c.262-204_262-203del
others(2): Show 
c.262-204_262-203delTG
SNX12 ENSG00000147164.12 transcript ENST00000374274.8 protein_coding 2/3 chrX 71062169
chrX:71062368 C
C
 CT
CT
 27 a0001c0001t0001g0003
a0001c0001t0001g0005
a0001c0001t0001g0006
others(24): Show 
a0001c0001t0001g0003
a0001c0001t0001g0005
a0001c0001t0001g0006
a0001c0001t0001g0014
a0001c0001t0001g0019
a0001c0001t0001g0020
a0001c0001t0001g0029
a0001c0001t0001g0031
a0001c0001t0001g0054
a0001c0001t0001g0059
a0001c0001t0001g0087
a0001c0001t0001g0088
a0001c0001t0001g0092
a0001c0001t0001g0093
a0001c0001t0001g0097
a0001c0001t0001g0098
a0001c0001t0001g0099
a0001c0001t0001g0101
a0001c0001t0001g0104
a0001c0001t0001g0105
a0001c0001t0002g0018
a0001c0001t0002g0025
a0001c0001t0010g0083
a0001c0001t0014g0094
a0001c0002t0003g0017
a0001c0002t0003g0045
a0001c0002t0003g0047
 78 HG00099.hp2
HG00323.hp2
HG00544.hp1
others(75): Show 
HG00099.hp2
HG00323.hp2
HG00544.hp1
HG00735.hp1
HG00741.hp1
HG01175.hp1
HG01255.hp1
HG01433.hp1
HG01884.hp1
HG01891.hp2
HG02055.hp1
HG02056.hp1
HG02071.hp1
HG02109.hp1
HG02109.hp2
HG02148.hp2
HG02155.hp2
HG02165.hp2
HG02280.hp2
HG02486.hp1
HG02523.hp1
HG02559.hp1
HG02559.hp2
HG02622.hp1
HG02622.hp2
HG02647.hp1
HG02698.hp1
HG02809.hp1
HG02886.hp2
HG02895.hp1
HG02897.hp2
HG02922.hp1
HG02965.hp1
HG02970.hp1
HG02976.hp1
HG03017.hp1
HG03041.hp2
HG03098.hp1
HG03130.hp1
HG03139.hp1
HG03195.hp1
HG03195.hp2
HG03225.hp1
HG03239.hp2
HG03471.hp1
HG03486.hp1
HG03540.hp1
HG03654.hp1
HG03710.hp1
HG03831.hp1
HG03834.hp2
HG03942.hp1
HG04184.hp2
HG06807.hp2
NA18941.hp2
NA18947.hp2
NA18951.hp2
NA18957.hp1
NA18968.hp1
NA18977.hp1
NA18980.hp2
NA18981.hp2
NA18993.hp1
NA18999.hp2
NA19030.hp1
NA19030.hp2
NA19043.hp1
NA19075.hp1
NA19078.hp1
NA19083.hp1
NA19088.hp1
NA19090.hp1
NA19240.hp1
NA20129.hp2
NA20300.hp2
NA20752.hp1
NA21309.hp2
homoSapiens_chm13v2.hp1
 intron_variant MODIFIER c.262-402dupA
c.262-402dupA
SNX12 ENSG00000147164.12 transcript ENST00000374274.8 protein_coding 2/3 chrX 71062368
chrX:71062368 C
C
 CTT
CTT
 9 a0001c0001t0001g0028
a0001c0001t0001g0103
a0001c0001t0011g0096
others(6): Show 
a0001c0001t0001g0028
a0001c0001t0001g0103
a0001c0001t0011g0096
a0001c0002t0003g0010
a0001c0002t0003g0044
a0001c0002t0003g0046
a0001c0002t0003g0048
a0001c0002t0003g0084
a0001c0002t0007g0042
 15 HG00423.hp2
HG02970.hp2
HG03516.hp2
others(12): Show 
HG00423.hp2
HG02970.hp2
HG03516.hp2
HG03834.hp1
NA18952.hp1
NA18980.hp1
NA18999.hp1
NA19009.hp1
NA19012.hp1
NA19058.hp1
NA19066.hp1
NA19079.hp1
NA19081.hp2
NA19087.hp2
NA19089.hp1
 intron_variant MODIFIER c.262-403_262-402dup
others(2): Show 
c.262-403_262-402dupAA
SNX12 ENSG00000147164.12 transcript ENST00000374274.8 protein_coding 2/3 chrX 71062368
chrX:71062368 CT
CT
 C
C
 9 a0001c0001t0001g0030
a0001c0001t0001g0035
a0001c0001t0001g0076
others(6): Show 
a0001c0001t0001g0030
a0001c0001t0001g0035
a0001c0001t0001g0076
a0001c0001t0002g0052
a0001c0001t0002g0070
a0001c0001t0002g0081
a0001c0001t0004g0038
a0001c0001t0005g0074
a0001c0001t0008g0069
 9 HG01168.hp2
HG01257.hp2
HG02258.hp1
others(6): Show 
HG01168.hp2
HG01257.hp2
HG02258.hp1
HG03041.hp1
HG03490.hp1
HG04199.hp1
NA18961.hp1
NA18968.hp2
NA18994.hp1
 intron_variant MODIFIER c.262-402delA
c.262-402delA
SNX12 ENSG00000147164.12 transcript ENST00000374274.8 protein_coding 2/3 chrX 71062368
chrX:71062368 CTTT
CTTT
 C
C
 1 a0001c0001t0001g0041
a0001c0001t0001g0041
 1 HG00738.hp1
HG00738.hp1
 intron_variant MODIFIER c.262-404_262-402del
others(3): Show 
c.262-404_262-402delAAA
SNX12 ENSG00000147164.12 transcript ENST00000374274.8 protein_coding 2/3 chrX 71062368
chrX:71062368 CTTTT
CTTTT
 C
C
 1 a0001c0001t0001g0040
a0001c0001t0001g0040
 1 HG02630.hp2
HG02630.hp2
 intron_variant MODIFIER c.262-405_262-402del
others(4): Show 
c.262-405_262-402delAAAA
SNX12 ENSG00000147164.12 transcript ENST00000374274.8 protein_coding 2/3 chrX 71062368
chrX:71062368 CTTTTT
CTTTTT
 C
C
 1 a0001c0001t0001g0057
a0001c0001t0001g0057
 1 HG02280.hp1
HG02280.hp1
 intron_variant MODIFIER c.262-406_262-402del
others(5): Show 
c.262-406_262-402delAAAAA
SNX12 ENSG00000147164.12 transcript ENST00000374274.8 protein_coding 2/3 chrX 71062368
chrX:71062368 CTTTTTT
CTTTTTT
 C
C
 1 a0001c0001t0001g0058
a0001c0001t0001g0058
 1 HG03486.hp2
HG03486.hp2
 intron_variant MODIFIER c.262-407_262-402del
others(6): Show 
c.262-407_262-402delAAAAAA
SNX12 ENSG00000147164.12 transcript ENST00000374274.8 protein_coding 2/3 chrX 71062368
chrX:71062436 G
G
 A
A
 1 a0001c0001t0001g0041
a0001c0001t0001g0041
 1 HG00738.hp1
HG00738.hp1
 intron_variant MODIFIER c.261+418C>T
c.261+418C>T
SNX12 ENSG00000147164.12 transcript ENST00000374274.8 protein_coding 2/3 chrX 71062436
chrX:71062494 T
T
 A
A
 1 a0001c0001t0001g0077
a0001c0001t0001g0077
 1 HG01109.hp1
HG01109.hp1
 intron_variant MODIFIER c.261+360A>T
c.261+360A>T
SNX12 ENSG00000147164.12 transcript ENST00000374274.8 protein_coding 2/3 chrX 71062494
chrX:71062525 AC
AC
 A
A
 10 a0001c0001t0001g0005
a0001c0001t0001g0028
a0001c0001t0001g0029
others(7): Show 
a0001c0001t0001g0005
a0001c0001t0001g0028
a0001c0001t0001g0029
a0001c0001t0001g0031
a0001c0001t0001g0087
a0001c0001t0001g0088
a0001c0001t0001g0091
a0001c0001t0001g0093
a0001c0001t0001g0098
a0001c0001t0011g0096
 21 HG02155.hp2
HG02165.hp2
HG02523.hp1
others(18): Show 
HG02155.hp2
HG02165.hp2
HG02523.hp1
HG03017.hp1
HG03654.hp1
HG03942.hp1
NA18941.hp2
NA18947.hp2
NA18957.hp1
NA18968.hp1
NA18980.hp2
NA18981.hp2
NA18988.hp1
NA18999.hp2
NA19058.hp1
NA19066.hp1
NA19078.hp1
NA19079.hp1
NA19083.hp1
NA19088.hp1
NA19090.hp1
 intron_variant MODIFIER c.261+328delG
c.261+328delG
SNX12 ENSG00000147164.12 transcript ENST00000374274.8 protein_coding 2/3 chrX 71062525
chrX:71062620 GC
GC
 G
G
 1 a0001c0001t0001g0091
a0001c0001t0001g0091
 1 NA18988.hp1
NA18988.hp1
 intron_variant MODIFIER c.261+233delG
c.261+233delG
SNX12 ENSG00000147164.12 transcript ENST00000374274.8 protein_coding 2/3 chrX 71062620
chrX:71062668 C
C
 A
A
 1 a0001c0001t0010g0083
a0001c0001t0010g0083
 1 HG01884.hp1
HG01884.hp1
 intron_variant MODIFIER c.261+186G>T
c.261+186G>T
SNX12 ENSG00000147164.12 transcript ENST00000374274.8 protein_coding 2/3 chrX 71062668
chrX:71062846 A
A
 G
G
 75 a0001c0001t0001g0002
a0001c0001t0001g0003
a0001c0001t0001g0005
others(72): Show 
a0001c0001t0001g0002
a0001c0001t0001g0003
a0001c0001t0001g0005
a0001c0001t0001g0006
a0001c0001t0001g0007
a0001c0001t0001g0011
a0001c0001t0001g0013
a0001c0001t0001g0014
a0001c0001t0001g0015
a0001c0001t0001g0016
a0001c0001t0001g0019
a0001c0001t0001g0020
a0001c0001t0001g0022
a0001c0001t0001g0024
a0001c0001t0001g0027
a0001c0001t0001g0028
a0001c0001t0001g0029
a0001c0001t0001g0030
a0001c0001t0001g0031
a0001c0001t0001g0033
a0001c0001t0001g0034
a0001c0001t0001g0035
a0001c0001t0001g0036
a0001c0001t0001g0037
a0001c0001t0001g0039
a0001c0001t0001g0040
a0001c0001t0001g0041
a0001c0001t0001g0050
a0001c0001t0001g0051
a0001c0001t0001g0054
a0001c0001t0001g0056
a0001c0001t0001g0057
a0001c0001t0001g0058
a0001c0001t0001g0059
a0001c0001t0001g0061
a0001c0001t0001g0062
a0001c0001t0001g0073
a0001c0001t0001g0075
a0001c0001t0001g0076
a0001c0001t0001g0077
a0001c0001t0001g0080
a0001c0001t0001g0087
a0001c0001t0001g0088
a0001c0001t0001g0091
a0001c0001t0001g0092
a0001c0001t0001g0093
a0001c0001t0001g0095
a0001c0001t0001g0097
a0001c0001t0001g0098
a0001c0001t0001g0099
a0001c0001t0001g0101
a0001c0001t0001g0102
a0001c0001t0001g0103
a0001c0001t0001g0104
a0001c0001t0001g0105
a0001c0001t0004g0012
a0001c0001t0004g0038
a0001c0001t0005g0023
a0001c0001t0005g0074
a0001c0001t0006g0055
a0001c0001t0006g0071
a0001c0001t0009g0053
a0001c0001t0010g0083
a0001c0001t0011g0096
a0001c0001t0014g0094
a0001c0002t0003g0010
a0001c0002t0003g0017
a0001c0002t0003g0043
a0001c0002t0003g0044
a0001c0002t0003g0045
a0001c0002t0003g0046
a0001c0002t0003g0047
a0001c0002t0003g0048
a0001c0002t0003g0084
a0001c0002t0007g0042
 182 HG00099.hp1
HG00099.hp2
HG00140.hp1
others(179): Show 
HG00099.hp1
HG00099.hp2
HG00140.hp1
HG00323.hp2
HG00423.hp2
HG00544.hp1
HG00639.hp2
HG00642.hp1
HG00673.hp1
HG00733.hp2
HG00735.hp1
HG00738.hp1
HG00741.hp1
HG01069.hp1
HG01070.hp1
HG01071.hp2
HG01081.hp1
HG01081.hp2
HG01099.hp1
HG01106.hp1
HG01109.hp1
HG01123.hp1
HG01123.hp2
HG01167.hp1
HG01168.hp1
HG01168.hp2
HG01169.hp1
HG01169.hp2
HG01175.hp1
HG01175.hp2
HG01192.hp1
HG01256.hp1
HG01257.hp2
HG01258.hp1
HG01361.hp2
HG01433.hp1
HG01496.hp1
HG01884.hp1
HG01884.hp2
HG01891.hp1
HG01891.hp2
HG01934.hp1
HG01943.hp1
HG01952.hp1
HG01975.hp1
HG01978.hp2
HG01981.hp1
HG01981.hp2
HG01993.hp1
HG02015.hp1
HG02055.hp1
HG02056.hp1
HG02074.hp1
HG02080.hp2
HG02109.hp1
HG02109.hp2
HG02145.hp1
HG02148.hp1
HG02148.hp2
HG02155.hp1
HG02155.hp2
HG02165.hp1
HG02165.hp2
HG02258.hp1
HG02273.hp1
HG02273.hp2
HG02280.hp1
HG02280.hp2
HG02293.hp1
HG02451.hp1
HG02486.hp1
HG02523.hp1
HG02559.hp1
HG02559.hp2
HG02572.hp1
HG02622.hp1
HG02622.hp2
HG02630.hp1
HG02630.hp2
HG02647.hp1
HG02683.hp1
HG02683.hp2
HG02698.hp1
HG02809.hp1
HG02809.hp2
HG02886.hp1
HG02886.hp2
HG02895.hp1
HG02896.hp1
HG02896.hp2
HG02897.hp1
HG02897.hp2
HG02922.hp1
HG02965.hp1
HG02970.hp1
HG02970.hp2
HG02976.hp1
HG03017.hp1
HG03041.hp1
HG03041.hp2
HG03130.hp1
HG03139.hp1
HG03195.hp1
HG03195.hp2
HG03209.hp1
HG03225.hp1
HG03239.hp2
HG03453.hp1
HG03453.hp2
HG03471.hp1
HG03486.hp1
HG03486.hp2
HG03490.hp1
HG03516.hp1
HG03516.hp2
HG03540.hp1
HG03540.hp2
HG03579.hp1
HG03654.hp1
HG03669.hp2
HG03710.hp1
HG03831.hp1
HG03834.hp1
HG03834.hp2
HG03942.hp1
HG04115.hp1
HG04184.hp2
HG06807.hp1
HG06807.hp2
NA18522.hp1
NA18906.hp1
NA18939.hp1
NA18941.hp2
NA18942.hp1
NA18945.hp1
NA18947.hp2
NA18950.hp1
NA18951.hp2
NA18952.hp1
NA18953.hp1
NA18957.hp1
NA18957.hp2
NA18965.hp1
NA18968.hp1
NA18974.hp1
NA18980.hp1
NA18980.hp2
NA18981.hp2
NA18988.hp1
NA18991.hp1
NA18993.hp1
NA18999.hp1
NA18999.hp2
NA19005.hp1
NA19007.hp1
NA19009.hp1
NA19012.hp1
NA19030.hp1
NA19030.hp2
NA19043.hp1
NA19054.hp1
NA19056.hp1
NA19058.hp1
NA19064.hp2
NA19066.hp1
NA19076.hp1
NA19078.hp1
NA19079.hp1
NA19081.hp2
NA19083.hp1
NA19087.hp2
NA19088.hp1
NA19089.hp1
NA19090.hp1
NA19240.hp1
NA20129.hp2
NA20300.hp2
NA20752.hp1
NA20805.hp1
NA21309.hp1
NA21309.hp2
homoSapiens_chm13v2.hp1
 splice_region_variant&intron_variant LOW c.261+8T>C
c.261+8T>C
SNX12 ENSG00000147164.12 transcript ENST00000374274.8 protein_coding 2/3 chrX 71062846
chrX:71063117 AC
AC
 A
A
 1 a0001c0002t0003g0084
a0001c0002t0003g0084
 1 NA19081.hp2
NA19081.hp2
 intron_variant MODIFIER c.166-169delG
c.166-169delG
SNX12 ENSG00000147164.12 transcript ENST00000374274.8 protein_coding 1/3 chrX 71063117
chrX:71063150 C
C
 T
T
 1 a0001c0001t0002g0064
a0001c0001t0002g0064
 1 HG00741.hp2
HG00741.hp2
 intron_variant MODIFIER c.166-201G>A
c.166-201G>A
SNX12 ENSG00000147164.12 transcript ENST00000374274.8 protein_coding 1/3 chrX 71063150
chrX:71063227 TG
TG
 T
T
 1 a0001c0002t0003g0084
a0001c0002t0003g0084
 1 NA19081.hp2
NA19081.hp2
 intron_variant MODIFIER c.166-279delC
c.166-279delC
SNX12 ENSG00000147164.12 transcript ENST00000374274.8 protein_coding 1/3 chrX 71063227
chrX:71063363 G
G
 A
A
 2 a0001c0001t0006g0055
a0001c0001t0006g0071
a0001c0001t0006g0055
a0001c0001t0006g0071
 2 HG01167.hp1
HG01169.hp2
HG01167.hp1
HG01169.hp2
 intron_variant MODIFIER c.166-414C>T
c.166-414C>T
SNX12 ENSG00000147164.12 transcript ENST00000374274.8 protein_coding 1/3 chrX 71063363
chrX:71063428 C
C
 CG
CG
 1 a0001c0002t0003g0084
a0001c0002t0003g0084
 1 NA19081.hp2
NA19081.hp2
 intron_variant MODIFIER c.166-480dupC
c.166-480dupC
SNX12 ENSG00000147164.12 transcript ENST00000374274.8 protein_coding 1/3 chrX 71063428
chrX:71063496 C
C
 CA
CA
 2 a0001c0001t0002g0049
a0001c0002t0003g0084
a0001c0001t0002g0049
a0001c0002t0003g0084
 2 NA19078.hp2
NA19081.hp2
NA19078.hp2
NA19081.hp2
 intron_variant MODIFIER c.166-548dupT
c.166-548dupT
SNX12 ENSG00000147164.12 transcript ENST00000374274.8 protein_coding 1/3 chrX 71063496
chrX:71063509 AAG
AAG
 A
A
 1 a0001c0001t0001g0097
a0001c0001t0001g0097
 1 HG01433.hp1
HG01433.hp1
 intron_variant MODIFIER c.166-562_166-561del
others(2): Show 
c.166-562_166-561delCT
SNX12 ENSG00000147164.12 transcript ENST00000374274.8 protein_coding 1/3 chrX 71063509
chrX:71063547 A
A
 AG
AG
 1 a0001c0002t0003g0084
a0001c0002t0003g0084
 1 NA19081.hp2
NA19081.hp2
 intron_variant MODIFIER c.166-599_166-598ins
others(1): Show 
c.166-599_166-598insC
SNX12 ENSG00000147164.12 transcript ENST00000374274.8 protein_coding 1/3 chrX 71063547
chrX:71063668 C
C
 CT
CT
 1 a0001c0002t0003g0084
a0001c0002t0003g0084
 1 NA19081.hp2
NA19081.hp2
 intron_variant MODIFIER c.166-720dupA
c.166-720dupA
SNX12 ENSG00000147164.12 transcript ENST00000374274.8 protein_coding 1/3 chrX 71063668
chrX:71063869 TG
TG
 T
T
 1 a0001c0002t0003g0084
a0001c0002t0003g0084
 1 NA19081.hp2
NA19081.hp2
 intron_variant MODIFIER c.166-921delC
c.166-921delC
SNX12 ENSG00000147164.12 transcript ENST00000374274.8 protein_coding 1/3 chrX 71063869
chrX:71063891 G
G
 A
A
 13 a0001c0001t0001g0002
a0001c0001t0001g0013
a0001c0001t0001g0014
others(10): Show 
a0001c0001t0001g0002
a0001c0001t0001g0013
a0001c0001t0001g0014
a0001c0001t0001g0027
a0001c0001t0001g0030
a0001c0001t0001g0051
a0001c0001t0001g0054
a0001c0001t0001g0062
a0001c0001t0001g0073
a0001c0001t0001g0075
a0001c0001t0001g0076
a0001c0001t0001g0077
a0001c0001t0001g0080
 49 HG00544.hp1
HG00639.hp2
HG00673.hp1
others(46): Show 
HG00544.hp1
HG00639.hp2
HG00673.hp1
HG01109.hp1
HG01123.hp2
HG01168.hp1
HG01169.hp1
HG01256.hp1
HG01257.hp2
HG01258.hp1
HG01361.hp2
HG01496.hp1
HG01934.hp1
HG01943.hp1
HG01952.hp1
HG01975.hp1
HG01978.hp2
HG01981.hp1
HG01981.hp2
HG01993.hp1
HG02056.hp1
HG02080.hp2
HG02148.hp1
HG02148.hp2
HG02155.hp1
HG02165.hp1
HG02273.hp1
HG02273.hp2
HG02293.hp1
HG02683.hp2
HG03490.hp1
HG04115.hp1
NA18939.hp1
NA18942.hp1
NA18945.hp1
NA18950.hp1
NA18951.hp2
NA18953.hp1
NA18957.hp2
NA18965.hp1
NA18974.hp1
NA18991.hp1
NA18993.hp1
NA19005.hp1
NA19007.hp1
NA19054.hp1
NA19056.hp1
NA19064.hp2
NA19076.hp1
 intron_variant MODIFIER c.166-942C>T
c.166-942C>T
SNX12 ENSG00000147164.12 transcript ENST00000374274.8 protein_coding 1/3 chrX 71063891
chrX:71063942 T
T
 TA
TA
 1 a0001c0002t0003g0084
a0001c0002t0003g0084
 1 NA19081.hp2
NA19081.hp2
 intron_variant MODIFIER c.166-994dupT
c.166-994dupT
SNX12 ENSG00000147164.12 transcript ENST00000374274.8 protein_coding 1/3 chrX 71063942
chrX:71063991 GT
GT
 G
G
 1 a0001c0002t0003g0084
a0001c0002t0003g0084
 1 NA19081.hp2
NA19081.hp2
 intron_variant MODIFIER c.166-1043delA
c.166-1043delA
SNX12 ENSG00000147164.12 transcript ENST00000374274.8 protein_coding 1/3 chrX 71063991
chrX:71064168 TA
TA
 T
T
 1 a0001c0001t0001g0073
a0001c0001t0001g0073
 1 NA18965.hp1
NA18965.hp1
 intron_variant MODIFIER c.166-1220delT
c.166-1220delT
SNX12 ENSG00000147164.12 transcript ENST00000374274.8 protein_coding 1/3 chrX 71064168
chrX:71064181 T
T
 C
C
 1 a0001c0001t0002g0072
a0001c0001t0002g0072
 1 NA19072.hp1
NA19072.hp1
 intron_variant MODIFIER c.166-1232A>G
c.166-1232A>G
SNX12 ENSG00000147164.12 transcript ENST00000374274.8 protein_coding 1/3 chrX 71064181
chrX:71064282 CA
CA
 C
C
 1 a0001c0002t0003g0084
a0001c0002t0003g0084
 1 NA19081.hp2
NA19081.hp2
 intron_variant MODIFIER c.166-1334delT
c.166-1334delT
SNX12 ENSG00000147164.12 transcript ENST00000374274.8 protein_coding 1/3 chrX 71064282
chrX:71064426 TA
TA
 T
T
 1 a0001c0002t0003g0084
a0001c0002t0003g0084
 1 NA19081.hp2
NA19081.hp2
 intron_variant MODIFIER c.166-1478delT
c.166-1478delT
SNX12 ENSG00000147164.12 transcript ENST00000374274.8 protein_coding 1/3 chrX 71064426
chrX:71064447 CT
CT
 C
C
 1 a0001c0002t0003g0084
a0001c0002t0003g0084
 1 NA19081.hp2
NA19081.hp2
 intron_variant MODIFIER c.166-1499delA
c.166-1499delA
SNX12 ENSG00000147164.12 transcript ENST00000374274.8 protein_coding 1/3 chrX 71064447
chrX:71064460 TA
TA
 T
T
 1 a0001c0002t0003g0084
a0001c0002t0003g0084
 1 NA19081.hp2
NA19081.hp2
 intron_variant MODIFIER c.166-1512delT
c.166-1512delT
SNX12 ENSG00000147164.12 transcript ENST00000374274.8 protein_coding 1/3 chrX 71064460
chrX:71064502 A
A
 C
C
 1 a0001c0001t0002g0060
a0001c0001t0002g0060
 1 NA18906.hp2
NA18906.hp2
 intron_variant MODIFIER c.166-1553T>G
c.166-1553T>G
SNX12 ENSG00000147164.12 transcript ENST00000374274.8 protein_coding 1/3 chrX 71064502
chrX:71064669 TC
TC
 T
T
 1 a0001c0002t0003g0084
a0001c0002t0003g0084
 1 NA19081.hp2
NA19081.hp2
 intron_variant MODIFIER c.166-1721delG
c.166-1721delG
SNX12 ENSG00000147164.12 transcript ENST00000374274.8 protein_coding 1/3 chrX 71064669
chrX:71064672 CCT
CCT
 C
C
 1 a0001c0001t0001g0059
a0001c0001t0001g0059
 1 HG03130.hp1
HG03130.hp1
 intron_variant MODIFIER c.166-1725_166-1724d
others(4): Show 
c.166-1725_166-1724delAG
SNX12 ENSG00000147164.12 transcript ENST00000374274.8 protein_coding 1/3 chrX 71064672
chrX:71064684 C
C
 T
T
 1 a0001c0001t0001g0022
a0001c0001t0001g0022
 2 HG03453.hp1
HG03540.hp2
HG03453.hp1
HG03540.hp2
 intron_variant MODIFIER c.166-1735G>A
c.166-1735G>A
SNX12 ENSG00000147164.12 transcript ENST00000374274.8 protein_coding 1/3 chrX 71064684
chrX:71064841 C
C
 CA
CA
 1 a0001c0002t0003g0084
a0001c0002t0003g0084
 1 NA19081.hp2
NA19081.hp2
 intron_variant MODIFIER c.166-1893dupT
c.166-1893dupT
SNX12 ENSG00000147164.12 transcript ENST00000374274.8 protein_coding 1/3 chrX 71064841
chrX:71065043 T
T
 TA
TA
 1 a0001c0002t0003g0084
a0001c0002t0003g0084
 1 NA19081.hp2
NA19081.hp2
 intron_variant MODIFIER c.166-2095dupT
c.166-2095dupT
SNX12 ENSG00000147164.12 transcript ENST00000374274.8 protein_coding 1/3 chrX 71065043
chrX:71065073 TA
TA
 T
T
 1 a0001c0002t0003g0084
a0001c0002t0003g0084
 1 NA19081.hp2
NA19081.hp2
 intron_variant MODIFIER c.166-2125delT
c.166-2125delT
SNX12 ENSG00000147164.12 transcript ENST00000374274.8 protein_coding 1/3 chrX 71065073
chrX:71065108 C
C
 T
T
 2 a0001c0001t0001g0105
a0001c0001t0010g0083
a0001c0001t0001g0105
a0001c0001t0010g0083
 2 HG01884.hp1
HG02976.hp1
HG01884.hp1
HG02976.hp1
 intron_variant MODIFIER c.166-2159G>A
c.166-2159G>A
SNX12 ENSG00000147164.12 transcript ENST00000374274.8 protein_coding 1/3 chrX 71065108
chrX:71065117 TC
TC
 T
T
 1 a0001c0002t0003g0084
a0001c0002t0003g0084
 1 NA19081.hp2
NA19081.hp2
 intron_variant MODIFIER c.166-2169delG
c.166-2169delG
SNX12 ENSG00000147164.12 transcript ENST00000374274.8 protein_coding 1/3 chrX 71065117
chrX:71065128 TG
TG
 T
T
 1 a0001c0001t0002g0085
a0001c0001t0002g0085
 1 NA19063.hp1
NA19063.hp1
 intron_variant MODIFIER c.166-2180delC
c.166-2180delC
SNX12 ENSG00000147164.12 transcript ENST00000374274.8 protein_coding 1/3 chrX 71065128
chrX:71065167 C
C
 G
G
 20 a0001c0001t0001g0002
a0001c0001t0001g0013
a0001c0001t0001g0014
others(17): Show 
a0001c0001t0001g0002
a0001c0001t0001g0013
a0001c0001t0001g0014
a0001c0001t0001g0022
a0001c0001t0001g0024
a0001c0001t0001g0027
a0001c0001t0001g0030
a0001c0001t0001g0050
a0001c0001t0001g0051
a0001c0001t0001g0054
a0001c0001t0001g0061
a0001c0001t0001g0062
a0001c0001t0001g0073
a0001c0001t0001g0075
a0001c0001t0001g0076
a0001c0001t0001g0077
a0001c0001t0001g0080
a0001c0001t0005g0023
a0001c0001t0005g0074
a0001c0001t0009g0053
 59 HG00544.hp1
HG00639.hp2
HG00673.hp1
others(56): Show 
HG00544.hp1
HG00639.hp2
HG00673.hp1
HG01109.hp1
HG01123.hp2
HG01168.hp1
HG01169.hp1
HG01256.hp1
HG01257.hp2
HG01258.hp1
HG01361.hp2
HG01496.hp1
HG01884.hp2
HG01934.hp1
HG01943.hp1
HG01952.hp1
HG01975.hp1
HG01978.hp2
HG01981.hp1
HG01981.hp2
HG01993.hp1
HG02015.hp1
HG02056.hp1
HG02080.hp2
HG02145.hp1
HG02148.hp1
HG02148.hp2
HG02155.hp1
HG02165.hp1
HG02273.hp1
HG02273.hp2
HG02293.hp1
HG02683.hp2
HG02809.hp2
HG03041.hp1
HG03453.hp1
HG03453.hp2
HG03490.hp1
HG03516.hp1
HG03540.hp2
HG04115.hp1
HG06807.hp1
NA18939.hp1
NA18942.hp1
NA18945.hp1
NA18950.hp1
NA18951.hp2
NA18953.hp1
NA18957.hp2
NA18965.hp1
NA18974.hp1
NA18991.hp1
NA18993.hp1
NA19005.hp1
NA19007.hp1
NA19054.hp1
NA19056.hp1
NA19064.hp2
NA19076.hp1
 intron_variant MODIFIER c.166-2218G>C
c.166-2218G>C
SNX12 ENSG00000147164.12 transcript ENST00000374274.8 protein_coding 1/3 chrX 71065167
chrX:71065357 C
C
 CA
CA
 47 a0001c0001t0001g0002
a0001c0001t0001g0006
a0001c0001t0001g0007
others(44): Show 
a0001c0001t0001g0002
a0001c0001t0001g0006
a0001c0001t0001g0007
a0001c0001t0001g0011
a0001c0001t0001g0013
a0001c0001t0001g0014
a0001c0001t0001g0015
a0001c0001t0001g0016
a0001c0001t0001g0022
a0001c0001t0001g0024
a0001c0001t0001g0027
a0001c0001t0001g0030
a0001c0001t0001g0033
a0001c0001t0001g0036
a0001c0001t0001g0041
a0001c0001t0001g0050
a0001c0001t0001g0054
a0001c0001t0001g0056
a0001c0001t0001g0057
a0001c0001t0001g0058
a0001c0001t0001g0059
a0001c0001t0001g0061
a0001c0001t0001g0062
a0001c0001t0001g0073
a0001c0001t0001g0075
a0001c0001t0001g0076
a0001c0001t0001g0077
a0001c0001t0001g0078
a0001c0001t0001g0080
a0001c0001t0001g0105
a0001c0001t0002g0008
a0001c0001t0002g0025
a0001c0001t0002g0060
a0001c0001t0002g0082
a0001c0001t0002g0100
a0001c0001t0005g0023
a0001c0001t0005g0074
a0001c0001t0006g0055
a0001c0001t0009g0053
a0001c0002t0003g0010
a0001c0002t0003g0017
a0001c0002t0003g0043
a0001c0002t0003g0046
a0001c0002t0003g0047
a0001c0002t0003g0048
a0001c0002t0003g0084
a0001c0002t0007g0042
 121 HG00140.hp1
HG00423.hp2
HG00544.hp1
others(118): Show 
HG00140.hp1
HG00423.hp2
HG00544.hp1
HG00639.hp2
HG00673.hp1
HG00735.hp1
HG00738.hp1
HG01069.hp1
HG01070.hp1
HG01071.hp2
HG01081.hp1
HG01081.hp2
HG01099.hp1
HG01106.hp1
HG01109.hp1
HG01123.hp2
HG01168.hp1
HG01169.hp1
HG01169.hp2
HG01175.hp2
HG01192.hp1
HG01255.hp1
HG01256.hp1
HG01257.hp2
HG01258.hp1
HG01261.hp1
HG01361.hp2
HG01496.hp1
HG01884.hp2
HG01891.hp1
HG01928.hp1
HG01934.hp1
HG01943.hp1
HG01952.hp1
HG01975.hp1
HG01978.hp2
HG01981.hp1
HG01981.hp2
HG01993.hp1
HG02015.hp1
HG02055.hp1
HG02056.hp1
HG02074.hp1
HG02080.hp2
HG02145.hp1
HG02148.hp1
HG02148.hp2
HG02155.hp1
HG02165.hp1
HG02273.hp1
HG02273.hp2
HG02280.hp1
HG02280.hp2
HG02293.hp1
HG02451.hp1
HG02559.hp2
HG02572.hp1
HG02622.hp1
HG02630.hp1
HG02683.hp2
HG02717.hp1
HG02738.hp1
HG02809.hp2
HG02886.hp1
HG02886.hp2
HG02896.hp2
HG02897.hp1
HG02970.hp1
HG02976.hp1
HG02976.hp2
HG03041.hp1
HG03098.hp1
HG03130.hp1
HG03195.hp1
HG03195.hp2
HG03209.hp1
HG03453.hp1
HG03453.hp2
HG03486.hp2
HG03490.hp1
HG03516.hp1
HG03516.hp2
HG03540.hp2
HG03579.hp1
HG03831.hp2
HG03834.hp1
HG04115.hp1
HG06807.hp1
NA18906.hp2
NA18939.hp1
NA18942.hp1
NA18945.hp1
NA18950.hp1
NA18951.hp1
NA18951.hp2
NA18952.hp1
NA18953.hp1
NA18957.hp2
NA18965.hp1
NA18974.hp1
NA18980.hp1
NA18991.hp1
NA18993.hp1
NA18999.hp1
NA19005.hp1
NA19007.hp1
NA19009.hp1
NA19030.hp2
NA19054.hp1
NA19056.hp1
NA19064.hp2
NA19081.hp2
NA19086.hp1
NA19087.hp2
NA19089.hp1
NA19240.hp1
NA19240.hp2
NA20129.hp1
NA20129.hp2
NA20805.hp1
NA21309.hp1
 intron_variant MODIFIER c.166-2409dupT
c.166-2409dupT
SNX12 ENSG00000147164.12 transcript ENST00000374274.8 protein_coding 1/3 chrX 71065357
chrX:71065357 C
C
 CAA
CAA
 11 a0001c0001t0001g0028
a0001c0001t0001g0039
a0001c0001t0001g0040
others(8): Show 
a0001c0001t0001g0028
a0001c0001t0001g0039
a0001c0001t0001g0040
a0001c0001t0001g0087
a0001c0001t0001g0092
a0001c0001t0001g0093
a0001c0001t0002g0079
a0001c0001t0004g0012
a0001c0001t0004g0038
a0001c0002t0003g0044
a0001c0002t0003g0045
 15 HG00099.hp1
HG00642.hp1
HG01123.hp1
others(12): Show 
HG00099.hp1
HG00642.hp1
HG01123.hp1
HG01168.hp2
HG01243.hp1
HG02109.hp2
HG02486.hp1
HG02630.hp2
HG02683.hp1
HG03017.hp1
HG03669.hp2
NA18947.hp2
NA19012.hp1
NA19066.hp1
NA19079.hp1
 intron_variant MODIFIER c.166-2410_166-2409d
others(4): Show 
c.166-2410_166-2409dupTT
SNX12 ENSG00000147164.12 transcript ENST00000374274.8 protein_coding 1/3 chrX 71065357
chrX:71065357 C
C
 CAAA
CAAA
 16 a0001c0001t0001g0003
a0001c0001t0001g0005
a0001c0001t0001g0019
others(13): Show 
a0001c0001t0001g0003
a0001c0001t0001g0005
a0001c0001t0001g0019
a0001c0001t0001g0029
a0001c0001t0001g0031
a0001c0001t0001g0088
a0001c0001t0001g0091
a0001c0001t0001g0095
a0001c0001t0001g0097
a0001c0001t0001g0099
a0001c0001t0001g0101
a0001c0001t0001g0102
a0001c0001t0001g0104
a0001c0001t0010g0083
a0001c0001t0011g0096
a0001c0001t0014g0094
 50 HG00099.hp2
HG00323.hp2
HG00741.hp1
others(47): Show 
HG00099.hp2
HG00323.hp2
HG00741.hp1
HG01175.hp1
HG01433.hp1
HG01884.hp1
HG01891.hp2
HG02109.hp1
HG02155.hp2
HG02165.hp2
HG02523.hp1
HG02559.hp1
HG02622.hp2
HG02698.hp1
HG02895.hp1
HG02896.hp1
HG02897.hp2
HG02922.hp1
HG02965.hp1
HG03041.hp2
HG03225.hp1
HG03239.hp2
HG03471.hp1
HG03486.hp1
HG03540.hp1
HG03654.hp1
HG03710.hp1
HG03831.hp1
HG03834.hp2
HG04184.hp2
HG06807.hp2
NA18906.hp1
NA18941.hp2
NA18957.hp1
NA18968.hp1
NA18980.hp2
NA18981.hp2
NA18988.hp1
NA18999.hp2
NA19030.hp1
NA19043.hp1
NA19058.hp1
NA19078.hp1
NA19083.hp1
NA19088.hp1
NA19090.hp1
NA20300.hp2
NA20752.hp1
NA21309.hp2
homoSapiens_chm13v2.hp1
 intron_variant MODIFIER c.166-2411_166-2409d
others(5): Show 
c.166-2411_166-2409dupTTT
SNX12 ENSG00000147164.12 transcript ENST00000374274.8 protein_coding 1/3 chrX 71065357
chrX:71065357 C
C
 CAAAA
CAAAA
 2 a0001c0001t0001g0020
a0001c0001t0001g0103
a0001c0001t0001g0020
a0001c0001t0001g0103
 4 HG02647.hp1
HG02809.hp1
HG02970.hp2
others(1): Show 
HG02647.hp1
HG02809.hp1
HG02970.hp2
HG03139.hp1
 intron_variant MODIFIER c.166-2412_166-2409d
others(6): Show 
c.166-2412_166-2409dupTTTT
SNX12 ENSG00000147164.12 transcript ENST00000374274.8 protein_coding 1/3 chrX 71065357
chrX:71065357 C
C
 CAAAAA
CAAAAA
 1 a0001c0001t0001g0098
a0001c0001t0001g0098
 1 HG03942.hp1
HG03942.hp1
 intron_variant MODIFIER c.166-2413_166-2409d
others(7): Show 
c.166-2413_166-2409dupTTTTT
SNX12 ENSG00000147164.12 transcript ENST00000374274.8 protein_coding 1/3 chrX 71065357
chrX:71065357 CA
CA
 C
C
 1 a0001c0001t0002g0021
a0001c0001t0002g0021
 2 HG01993.hp2
NA18940.hp1
HG01993.hp2
NA18940.hp1
 intron_variant MODIFIER c.166-2409delT
c.166-2409delT
SNX12 ENSG00000147164.12 transcript ENST00000374274.8 protein_coding 1/3 chrX 71065357
chrX:71065435 G
G
 A
A
 1 a0001c0001t0001g0080
a0001c0001t0001g0080
 1 HG02683.hp2
HG02683.hp2
 intron_variant MODIFIER c.166-2486C>T
c.166-2486C>T
SNX12 ENSG00000147164.12 transcript ENST00000374274.8 protein_coding 1/3 chrX 71065435
chrX:71065548 T
T
 C
C
 1 a0001c0001t0010g0083
a0001c0001t0010g0083
 1 HG01884.hp1
HG01884.hp1
 intron_variant MODIFIER c.165+2594A>G
c.165+2594A>G
SNX12 ENSG00000147164.12 transcript ENST00000374274.8 protein_coding 1/3 chrX 71065548
chrX:71065603 G
G
 A
A
 1 a0001c0001t0010g0083
a0001c0001t0010g0083
 1 HG01884.hp1
HG01884.hp1
 intron_variant MODIFIER c.165+2539C>T
c.165+2539C>T
SNX12 ENSG00000147164.12 transcript ENST00000374274.8 protein_coding 1/3 chrX 71065603
chrX:71065625 C
C
 T
T
 1 a0001c0001t0002g0063
a0001c0001t0002g0063
 1 HG00558.hp1
HG00558.hp1
 intron_variant MODIFIER c.165+2517G>A
c.165+2517G>A
SNX12 ENSG00000147164.12 transcript ENST00000374274.8 protein_coding 1/3 chrX 71065625
chrX:71065628 A
A
 T
T
 1 a0001c0001t0001g0062
a0001c0001t0001g0062
 1 HG01978.hp2
HG01978.hp2
 intron_variant MODIFIER c.165+2514T>A
c.165+2514T>A
SNX12 ENSG00000147164.12 transcript ENST00000374274.8 protein_coding 1/3 chrX 71065628
chrX:71065664 C
C
 T
T
 1 a0001c0001t0001g0061
a0001c0001t0001g0061
 1 HG06807.hp1
HG06807.hp1
 intron_variant MODIFIER c.165+2478G>A
c.165+2478G>A
SNX12 ENSG00000147164.12 transcript ENST00000374274.8 protein_coding 1/3 chrX 71065664
chrX:71065804 C
C
 CA
CA
 11 a0001c0001t0001g0006
a0001c0001t0001g0007
a0001c0001t0001g0036
others(8): Show 
a0001c0001t0001g0006
a0001c0001t0001g0007
a0001c0001t0001g0036
a0001c0001t0001g0039
a0001c0001t0001g0056
a0001c0001t0001g0057
a0001c0001t0001g0058
a0001c0001t0001g0059
a0001c0001t0002g0049
a0001c0002t0003g0046
a0001c0002t0003g0047
 24 HG00140.hp1
HG01070.hp1
HG01081.hp1
others(21): Show 
HG00140.hp1
HG01070.hp1
HG01081.hp1
HG01099.hp1
HG01106.hp1
HG01175.hp2
HG01192.hp1
HG02055.hp1
HG02280.hp1
HG02280.hp2
HG02451.hp1
HG02559.hp2
HG02622.hp1
HG02683.hp1
HG02886.hp2
HG03130.hp1
HG03195.hp2
HG03486.hp2
HG03516.hp2
NA19030.hp2
NA19078.hp2
NA19240.hp1
NA20129.hp2
NA20805.hp1
 intron_variant MODIFIER c.165+2337dupT
c.165+2337dupT
SNX12 ENSG00000147164.12 transcript ENST00000374274.8 protein_coding 1/3 chrX 71065804
chrX:71065804 CA
CA
 C
C
 3 a0001c0001t0001g0091
a0001c0001t0002g0060
a0001c0002t0003g0084
a0001c0001t0001g0091
a0001c0001t0002g0060
a0001c0002t0003g0084
 3 NA18906.hp2
NA18988.hp1
NA19081.hp2
NA18906.hp2
NA18988.hp1
NA19081.hp2
 intron_variant MODIFIER c.165+2337delT
c.165+2337delT
SNX12 ENSG00000147164.12 transcript ENST00000374274.8 protein_coding 1/3 chrX 71065804
chrX:71065832 G
G
 GT
GT
 1 a0001c0002t0003g0084
a0001c0002t0003g0084
 1 NA19081.hp2
NA19081.hp2
 intron_variant MODIFIER c.165+2309dupA
c.165+2309dupA
SNX12 ENSG00000147164.12 transcript ENST00000374274.8 protein_coding 1/3 chrX 71065832
chrX:71065860 T
T
 TC
TC
 1 a0001c0001t0002g0049
a0001c0001t0002g0049
 1 NA19078.hp2
NA19078.hp2
 intron_variant MODIFIER c.165+2281dupG
c.165+2281dupG
SNX12 ENSG00000147164.12 transcript ENST00000374274.8 protein_coding 1/3 chrX 71065860
chrX:71065979 G
G
 GA
GA
 21 a0001c0001t0001g0003
a0001c0001t0001g0005
a0001c0001t0001g0019
others(18): Show 
a0001c0001t0001g0003
a0001c0001t0001g0005
a0001c0001t0001g0019
a0001c0001t0001g0020
a0001c0001t0001g0028
a0001c0001t0001g0029
a0001c0001t0001g0031
a0001c0001t0001g0087
a0001c0001t0001g0088
a0001c0001t0001g0091
a0001c0001t0001g0092
a0001c0001t0001g0093
a0001c0001t0001g0095
a0001c0001t0001g0097
a0001c0001t0001g0098
a0001c0001t0001g0101
a0001c0001t0001g0102
a0001c0001t0001g0103
a0001c0001t0001g0104
a0001c0001t0011g0096
a0001c0001t0014g0094
 58 HG00099.hp2
HG00323.hp2
HG00741.hp1
others(55): Show 
HG00099.hp2
HG00323.hp2
HG00741.hp1
HG01175.hp1
HG01433.hp1
HG01891.hp2
HG02109.hp1
HG02155.hp2
HG02165.hp2
HG02486.hp1
HG02523.hp1
HG02559.hp1
HG02622.hp2
HG02647.hp1
HG02698.hp1
HG02809.hp1
HG02895.hp1
HG02896.hp1
HG02897.hp2
HG02922.hp1
HG02965.hp1
HG02970.hp2
HG03017.hp1
HG03041.hp2
HG03139.hp1
HG03225.hp1
HG03239.hp2
HG03471.hp1
HG03486.hp1
HG03540.hp1
HG03654.hp1
HG03831.hp1
HG03834.hp2
HG03942.hp1
HG04184.hp2
HG06807.hp2
NA18906.hp1
NA18941.hp2
NA18947.hp2
NA18957.hp1
NA18968.hp1
NA18980.hp2
NA18981.hp2
NA18988.hp1
NA18999.hp2
NA19030.hp1
NA19043.hp1
NA19058.hp1
NA19066.hp1
NA19078.hp1
NA19079.hp1
NA19083.hp1
NA19088.hp1
NA19090.hp1
NA20300.hp2
NA20752.hp1
NA21309.hp2
homoSapiens_chm13v2.hp1
 intron_variant MODIFIER c.165+2162dupT
c.165+2162dupT
SNX12 ENSG00000147164.12 transcript ENST00000374274.8 protein_coding 1/3 chrX 71065979
chrX:71065979 G
G
 GAA
GAA
 1 a0001c0001t0001g0099
a0001c0001t0001g0099
 1 HG03710.hp1
HG03710.hp1
 intron_variant MODIFIER c.165+2161_165+2162d
others(4): Show 
c.165+2161_165+2162dupTT
SNX12 ENSG00000147164.12 transcript ENST00000374274.8 protein_coding 1/3 chrX 71065979
chrX:71066062 G
G
 C
C
 1 a0001c0001t0001g0104
a0001c0001t0001g0104
 1 NA21309.hp2
NA21309.hp2
 intron_variant MODIFIER c.165+2080C>G
c.165+2080C>G
SNX12 ENSG00000147164.12 transcript ENST00000374274.8 protein_coding 1/3 chrX 71066062
chrX:71066128 GC
GC
 G
G
 1 a0001c0002t0003g0084
a0001c0002t0003g0084
 1 NA19081.hp2
NA19081.hp2
 intron_variant MODIFIER c.165+2013delG
c.165+2013delG
SNX12 ENSG00000147164.12 transcript ENST00000374274.8 protein_coding 1/3 chrX 71066128
chrX:71066152 ACTTGGGC
others(14): Show 
ACTTGGGCAAGTTACTTAAACT
 A
A
 1 a0001c0002t0003g0084
a0001c0002t0003g0084
 1 NA19081.hp2
NA19081.hp2
 intron_variant MODIFIER c.165+1969_165+1989d
others(23): Show 
c.165+1969_165+1989delAGTTTAAGTAACTTGCCCAAG
SNX12 ENSG00000147164.12 transcript ENST00000374274.8 protein_coding 1/3 chrX 71066152
chrX:71066163 T
T
 C
C
 22 a0001c0001t0001g0003
a0001c0001t0001g0005
a0001c0001t0001g0019
others(19): Show 
a0001c0001t0001g0003
a0001c0001t0001g0005
a0001c0001t0001g0019
a0001c0001t0001g0020
a0001c0001t0001g0028
a0001c0001t0001g0029
a0001c0001t0001g0031
a0001c0001t0001g0087
a0001c0001t0001g0088
a0001c0001t0001g0091
a0001c0001t0001g0092
a0001c0001t0001g0093
a0001c0001t0001g0095
a0001c0001t0001g0097
a0001c0001t0001g0098
a0001c0001t0001g0099
a0001c0001t0001g0101
a0001c0001t0001g0102
a0001c0001t0001g0103
a0001c0001t0001g0104
a0001c0001t0011g0096
a0001c0001t0014g0094
 59 HG00099.hp2
HG00323.hp2
HG00741.hp1
others(56): Show 
HG00099.hp2
HG00323.hp2
HG00741.hp1
HG01175.hp1
HG01433.hp1
HG01891.hp2
HG02109.hp1
HG02155.hp2
HG02165.hp2
HG02486.hp1
HG02523.hp1
HG02559.hp1
HG02622.hp2
HG02647.hp1
HG02698.hp1
HG02809.hp1
HG02895.hp1
HG02896.hp1
HG02897.hp2
HG02922.hp1
HG02965.hp1
HG02970.hp2
HG03017.hp1
HG03041.hp2
HG03139.hp1
HG03225.hp1
HG03239.hp2
HG03471.hp1
HG03486.hp1
HG03540.hp1
HG03654.hp1
HG03710.hp1
HG03831.hp1
HG03834.hp2
HG03942.hp1
HG04184.hp2
HG06807.hp2
NA18906.hp1
NA18941.hp2
NA18947.hp2
NA18957.hp1
NA18968.hp1
NA18980.hp2
NA18981.hp2
NA18988.hp1
NA18999.hp2
NA19030.hp1
NA19043.hp1
NA19058.hp1
NA19066.hp1
NA19078.hp1
NA19079.hp1
NA19083.hp1
NA19088.hp1
NA19090.hp1
NA20300.hp2
NA20752.hp1
NA21309.hp2
homoSapiens_chm13v2.hp1
 intron_variant MODIFIER c.165+1979A>G
c.165+1979A>G
SNX12 ENSG00000147164.12 transcript ENST00000374274.8 protein_coding 1/3 chrX 71066163
chrX:71066291 T
T
 C
C
 3 a0001c0001t0001g0011
a0001c0001t0001g0034
a0001c0001t0001g0035
a0001c0001t0001g0011
a0001c0001t0001g0034
a0001c0001t0001g0035
 7 HG01891.hp1
HG02258.hp1
HG02572.hp1
others(4): Show 
HG01891.hp1
HG02258.hp1
HG02572.hp1
HG02896.hp2
HG02897.hp1
HG03209.hp1
NA18522.hp1
 intron_variant MODIFIER c.165+1851A>G
c.165+1851A>G
SNX12 ENSG00000147164.12 transcript ENST00000374274.8 protein_coding 1/3 chrX 71066291
chrX:71066336 TC
TC
 T
T
 1 a0001c0001t0002g0049
a0001c0001t0002g0049
 1 NA19078.hp2
NA19078.hp2
 intron_variant MODIFIER c.165+1805delG
c.165+1805delG
SNX12 ENSG00000147164.12 transcript ENST00000374274.8 protein_coding 1/3 chrX 71066336
chrX:71066591 T
T
 TA
TA
 12 a0001c0001t0001g0016
a0001c0001t0001g0027
a0001c0001t0001g0040
others(9): Show 
a0001c0001t0001g0016
a0001c0001t0001g0027
a0001c0001t0001g0040
a0001c0001t0001g0101
a0001c0001t0001g0102
a0001c0001t0001g0103
a0001c0001t0001g0104
a0001c0001t0002g0026
a0001c0001t0002g0049
a0001c0001t0002g0081
a0001c0001t0002g0082
a0001c0001t0002g0100
 16 HG00673.hp1
HG01261.hp1
HG02630.hp1
others(13): Show 
HG00673.hp1
HG01261.hp1
HG02630.hp1
HG02630.hp2
HG02738.hp1
HG02896.hp1
HG02970.hp2
HG03239.hp1
HG03579.hp1
HG03831.hp1
NA18943.hp1
NA18968.hp2
NA18991.hp1
NA19078.hp2
NA21309.hp1
NA21309.hp2
 intron_variant MODIFIER c.165+1550dupT
c.165+1550dupT
SNX12 ENSG00000147164.12 transcript ENST00000374274.8 protein_coding 1/3 chrX 71066591
chrX:71066591 T
T
 TAA
TAA
 1 a0001c0001t0002g0032
a0001c0001t0002g0032
 1 NA18967.hp1
NA18967.hp1
 intron_variant MODIFIER c.165+1549_165+1550d
others(4): Show 
c.165+1549_165+1550dupTT
SNX12 ENSG00000147164.12 transcript ENST00000374274.8 protein_coding 1/3 chrX 71066591
chrX:71066591 T
T
 TAAA
TAAA
 1 a0001c0001t0001g0105
a0001c0001t0001g0105
 1 HG02976.hp1
HG02976.hp1
 intron_variant MODIFIER c.165+1548_165+1550d
others(5): Show 
c.165+1548_165+1550dupTTT
SNX12 ENSG00000147164.12 transcript ENST00000374274.8 protein_coding 1/3 chrX 71066591
chrX:71066591 TA
TA
 T
T
 15 a0001c0001t0001g0006
a0001c0001t0001g0013
a0001c0001t0001g0019
others(12): Show 
a0001c0001t0001g0006
a0001c0001t0001g0013
a0001c0001t0001g0019
a0001c0001t0001g0036
a0001c0001t0001g0054
a0001c0001t0001g0056
a0001c0001t0001g0057
a0001c0001t0001g0058
a0001c0001t0001g0059
a0001c0001t0001g0087
a0001c0001t0001g0088
a0001c0001t0002g0004
a0001c0001t0002g0052
a0001c0001t0006g0055
a0001c0001t0009g0053
 36 HG00323.hp2
HG01070.hp1
HG01070.hp2
others(33): Show 
HG00323.hp2
HG01070.hp1
HG01070.hp2
HG01169.hp1
HG01169.hp2
HG01256.hp1
HG01257.hp1
HG01358.hp1
HG01975.hp2
HG02055.hp1
HG02273.hp1
HG02280.hp1
HG02280.hp2
HG02451.hp1
HG02559.hp2
HG02622.hp1
HG02809.hp2
HG02886.hp2
HG02895.hp1
HG02922.hp2
HG03017.hp1
HG03130.hp1
HG03195.hp2
HG03486.hp2
NA18612.hp1
NA18942.hp2
NA18951.hp2
NA18959.hp1
NA18974.hp1
NA18981.hp1
NA18989.hp1
NA18994.hp1
NA18999.hp2
NA19030.hp2
NA19043.hp1
NA20129.hp2
 intron_variant MODIFIER c.165+1550delT
c.165+1550delT
SNX12 ENSG00000147164.12 transcript ENST00000374274.8 protein_coding 1/3 chrX 71066591
chrX:71066591 TAA
TAA
 T
T
 1 a0001c0001t0001g0051
a0001c0001t0001g0051
 1 NA19076.hp1
NA19076.hp1
 intron_variant MODIFIER c.165+1549_165+1550d
others(4): Show 
c.165+1549_165+1550delTT
SNX12 ENSG00000147164.12 transcript ENST00000374274.8 protein_coding 1/3 chrX 71066591
chrX:71066633 C
C
 T
T
 1 a0001c0001t0001g0050
a0001c0001t0001g0050
 1 HG03516.hp1
HG03516.hp1
 intron_variant MODIFIER c.165+1509G>A
c.165+1509G>A
SNX12 ENSG00000147164.12 transcript ENST00000374274.8 protein_coding 1/3 chrX 71066633
chrX:71066895 T
T
 C
C
 1 a0001c0001t0010g0083
a0001c0001t0010g0083
 1 HG01884.hp1
HG01884.hp1
 intron_variant MODIFIER c.165+1247A>G
c.165+1247A>G
SNX12 ENSG00000147164.12 transcript ENST00000374274.8 protein_coding 1/3 chrX 71066895
chrX:71066926 T
T
 C
C
 8 a0001c0001t0001g0007
a0001c0001t0001g0015
a0001c0001t0001g0016
others(5): Show 
a0001c0001t0001g0007
a0001c0001t0001g0015
a0001c0001t0001g0016
a0001c0001t0001g0036
a0001c0001t0001g0037
a0001c0001t0001g0039
a0001c0001t0004g0012
a0001c0001t0004g0038
 21 HG00099.hp1
HG00140.hp1
HG00642.hp1
others(18): Show 
HG00099.hp1
HG00140.hp1
HG00642.hp1
HG00733.hp2
HG01069.hp1
HG01070.hp1
HG01071.hp2
HG01081.hp1
HG01099.hp1
HG01106.hp1
HG01123.hp1
HG01168.hp2
HG01175.hp2
HG01192.hp1
HG02074.hp1
HG02630.hp1
HG02683.hp1
HG03579.hp1
HG03669.hp2
NA20805.hp1
NA21309.hp1
 intron_variant MODIFIER c.165+1216A>G
c.165+1216A>G
SNX12 ENSG00000147164.12 transcript ENST00000374274.8 protein_coding 1/3 chrX 71066926
chrX:71067005 C
C
 A
A
 1 a0001c0002t0003g0048
a0001c0002t0003g0048
 1 HG03834.hp1
HG03834.hp1
 intron_variant MODIFIER c.165+1137G>T
c.165+1137G>T
SNX12 ENSG00000147164.12 transcript ENST00000374274.8 protein_coding 1/3 chrX 71067005
chrX:71067116 TG
TG
 T
T
 1 a0001c0001t0002g0049
a0001c0001t0002g0049
 1 NA19078.hp2
NA19078.hp2
 intron_variant MODIFIER c.165+1025delC
c.165+1025delC
SNX12 ENSG00000147164.12 transcript ENST00000374274.8 protein_coding 1/3 chrX 71067116
chrX:71067155 GC
GC
 G
G
 1 a0001c0001t0002g0032
a0001c0001t0002g0032
 1 NA18967.hp1
NA18967.hp1
 intron_variant MODIFIER c.165+986delG
c.165+986delG
SNX12 ENSG00000147164.12 transcript ENST00000374274.8 protein_coding 1/3 chrX 71067155
chrX:71067158 A
A
 C
C
 1 a0001c0001t0002g0032
a0001c0001t0002g0032
 1 NA18967.hp1
NA18967.hp1
 intron_variant MODIFIER c.165+984T>G
c.165+984T>G
SNX12 ENSG00000147164.12 transcript ENST00000374274.8 protein_coding 1/3 chrX 71067158
chrX:71067161 C
C
 T
T
 1 a0001c0001t0002g0032
a0001c0001t0002g0032
 1 NA18967.hp1
NA18967.hp1
 intron_variant MODIFIER c.165+981G>A
c.165+981G>A
SNX12 ENSG00000147164.12 transcript ENST00000374274.8 protein_coding 1/3 chrX 71067161
chrX:71067162 A
A
 AG
AG
 1 a0001c0001t0002g0032
a0001c0001t0002g0032
 1 NA18967.hp1
NA18967.hp1
 intron_variant MODIFIER c.165+979_165+980ins
others(1): Show 
c.165+979_165+980insC
SNX12 ENSG00000147164.12 transcript ENST00000374274.8 protein_coding 1/3 chrX 71067162
chrX:71067164 G
G
 T
T
 1 a0001c0001t0002g0032
a0001c0001t0002g0032
 1 NA18967.hp1
NA18967.hp1
 intron_variant MODIFIER c.165+978C>A
c.165+978C>A
SNX12 ENSG00000147164.12 transcript ENST00000374274.8 protein_coding 1/3 chrX 71067164
chrX:71067165 T
T
 C
C
 1 a0001c0001t0002g0032
a0001c0001t0002g0032
 1 NA18967.hp1
NA18967.hp1
 intron_variant MODIFIER c.165+977A>G
c.165+977A>G
SNX12 ENSG00000147164.12 transcript ENST00000374274.8 protein_coding 1/3 chrX 71067165
chrX:71067166 A
A
 G
G
 1 a0001c0001t0002g0032
a0001c0001t0002g0032
 1 NA18967.hp1
NA18967.hp1
 intron_variant MODIFIER c.165+976T>C
c.165+976T>C
SNX12 ENSG00000147164.12 transcript ENST00000374274.8 protein_coding 1/3 chrX 71067166
chrX:71067168 T
T
 G
G
 1 a0001c0001t0002g0032
a0001c0001t0002g0032
 1 NA18967.hp1
NA18967.hp1
 intron_variant MODIFIER c.165+974A>C
c.165+974A>C
SNX12 ENSG00000147164.12 transcript ENST00000374274.8 protein_coding 1/3 chrX 71067168
chrX:71067169 C
C
 T
T
 1 a0001c0001t0002g0032
a0001c0001t0002g0032
 1 NA18967.hp1
NA18967.hp1
 intron_variant MODIFIER c.165+973G>A
c.165+973G>A
SNX12 ENSG00000147164.12 transcript ENST00000374274.8 protein_coding 1/3 chrX 71067169
chrX:71067170 T
T
 G
G
 1 a0001c0001t0002g0032
a0001c0001t0002g0032
 1 NA18967.hp1
NA18967.hp1
 intron_variant MODIFIER c.165+972A>C
c.165+972A>C
SNX12 ENSG00000147164.12 transcript ENST00000374274.8 protein_coding 1/3 chrX 71067170
chrX:71067171 A
A
 T
T
 1 a0001c0001t0002g0032
a0001c0001t0002g0032
 1 NA18967.hp1
NA18967.hp1
 intron_variant MODIFIER c.165+971T>A
c.165+971T>A
SNX12 ENSG00000147164.12 transcript ENST00000374274.8 protein_coding 1/3 chrX 71067171
chrX:71067290 A
A
 T
T
 11 a0001c0001t0001g0041
a0001c0002t0003g0010
a0001c0002t0003g0017
others(8): Show 
a0001c0001t0001g0041
a0001c0002t0003g0010
a0001c0002t0003g0017
a0001c0002t0003g0043
a0001c0002t0003g0044
a0001c0002t0003g0045
a0001c0002t0003g0046
a0001c0002t0003g0047
a0001c0002t0003g0048
a0001c0002t0003g0084
a0001c0002t0007g0042
 18 HG00423.hp2
HG00735.hp1
HG00738.hp1
others(15): Show 
HG00423.hp2
HG00735.hp1
HG00738.hp1
HG01081.hp2
HG02109.hp2
HG02970.hp1
HG03195.hp1
HG03516.hp2
HG03834.hp1
NA18952.hp1
NA18980.hp1
NA18999.hp1
NA19009.hp1
NA19012.hp1
NA19081.hp2
NA19087.hp2
NA19089.hp1
NA19240.hp1
 intron_variant MODIFIER c.165+852T>A
c.165+852T>A
SNX12 ENSG00000147164.12 transcript ENST00000374274.8 protein_coding 1/3 chrX 71067290
chrX:71067348 T
T
 TATA
TATA
 1 a0001c0001t0001g0031
a0001c0001t0001g0031
 1 HG02155.hp2
HG02155.hp2
 intron_variant MODIFIER c.165+791_165+793dup
others(3): Show 
c.165+791_165+793dupTAT
SNX12 ENSG00000147164.12 transcript ENST00000374274.8 protein_coding 1/3 chrX 71067348
chrX:71067460 AG
AG
 A
A
 2 a0001c0001t0002g0085
a0001c0002t0003g0084
a0001c0001t0002g0085
a0001c0002t0003g0084
 2 NA19063.hp1
NA19081.hp2
NA19063.hp1
NA19081.hp2
 intron_variant MODIFIER c.165+681delC
c.165+681delC
SNX12 ENSG00000147164.12 transcript ENST00000374274.8 protein_coding 1/3 chrX 71067460
chrX:71067539 T
T
 G
G
 8 a0001c0001t0001g0007
a0001c0001t0001g0015
a0001c0001t0001g0016
others(5): Show 
a0001c0001t0001g0007
a0001c0001t0001g0015
a0001c0001t0001g0016
a0001c0001t0001g0036
a0001c0001t0001g0037
a0001c0001t0001g0039
a0001c0001t0004g0012
a0001c0001t0004g0038
 21 HG00099.hp1
HG00140.hp1
HG00642.hp1
others(18): Show 
HG00099.hp1
HG00140.hp1
HG00642.hp1
HG00733.hp2
HG01069.hp1
HG01070.hp1
HG01071.hp2
HG01081.hp1
HG01099.hp1
HG01106.hp1
HG01123.hp1
HG01168.hp2
HG01175.hp2
HG01192.hp1
HG02074.hp1
HG02630.hp1
HG02683.hp1
HG03579.hp1
HG03669.hp2
NA20805.hp1
NA21309.hp1
 intron_variant MODIFIER c.165+603A>C
c.165+603A>C
SNX12 ENSG00000147164.12 transcript ENST00000374274.8 protein_coding 1/3 chrX 71067539
chrX:71067742 A
A
 G
G
 1 a0001c0001t0001g0040
a0001c0001t0001g0040
 1 HG02630.hp2
HG02630.hp2
 intron_variant MODIFIER c.165+400T>C
c.165+400T>C
SNX12 ENSG00000147164.12 transcript ENST00000374274.8 protein_coding 1/3 chrX 71067742
chrX:71067752 T
T
 C
C
 1 a0001c0001t0002g0086
a0001c0001t0002g0086
 1 NA18966.hp1
NA18966.hp1
 intron_variant MODIFIER c.165+390A>G
c.165+390A>G
SNX12 ENSG00000147164.12 transcript ENST00000374274.8 protein_coding 1/3 chrX 71067752
chrX:71067833 C
C
 G
G
 13 a0001c0001t0001g0007
a0001c0001t0001g0011
a0001c0001t0001g0015
others(10): Show 
a0001c0001t0001g0007
a0001c0001t0001g0011
a0001c0001t0001g0015
a0001c0001t0001g0016
a0001c0001t0001g0033
a0001c0001t0001g0034
a0001c0001t0001g0035
a0001c0001t0001g0036
a0001c0001t0001g0037
a0001c0001t0001g0039
a0001c0001t0001g0105
a0001c0001t0004g0012
a0001c0001t0004g0038
 30 HG00099.hp1
HG00140.hp1
HG00642.hp1
others(27): Show 
HG00099.hp1
HG00140.hp1
HG00642.hp1
HG00733.hp2
HG01069.hp1
HG01070.hp1
HG01071.hp2
HG01081.hp1
HG01099.hp1
HG01106.hp1
HG01123.hp1
HG01168.hp2
HG01175.hp2
HG01192.hp1
HG01891.hp1
HG02074.hp1
HG02258.hp1
HG02572.hp1
HG02630.hp1
HG02683.hp1
HG02886.hp1
HG02896.hp2
HG02897.hp1
HG02976.hp1
HG03209.hp1
HG03579.hp1
HG03669.hp2
NA18522.hp1
NA20805.hp1
NA21309.hp1
 intron_variant MODIFIER c.165+309G>C
c.165+309G>C
SNX12 ENSG00000147164.12 transcript ENST00000374274.8 protein_coding 1/3 chrX 71067833
chrX:71067927 T
T
 C
C
 26 a0001c0001t0001g0003
a0001c0001t0001g0005
a0001c0001t0001g0019
others(23): Show 
a0001c0001t0001g0003
a0001c0001t0001g0005
a0001c0001t0001g0019
a0001c0001t0001g0020
a0001c0001t0001g0028
a0001c0001t0001g0029
a0001c0001t0001g0031
a0001c0001t0001g0087
a0001c0001t0001g0088
a0001c0001t0001g0091
a0001c0001t0001g0092
a0001c0001t0001g0093
a0001c0001t0001g0095
a0001c0001t0001g0097
a0001c0001t0001g0098
a0001c0001t0001g0099
a0001c0001t0001g0101
a0001c0001t0001g0102
a0001c0001t0001g0103
a0001c0001t0001g0104
a0001c0001t0002g0009
a0001c0001t0002g0100
a0001c0001t0011g0096
a0001c0001t0013g0089
a0001c0001t0014g0094
a0001c0001t0015g0090
 69 HG00099.hp2
HG00323.hp2
HG00741.hp1
others(66): Show 
HG00099.hp2
HG00323.hp2
HG00741.hp1
HG01175.hp1
HG01261.hp1
HG01361.hp1
HG01433.hp1
HG01891.hp2
HG02109.hp1
HG02155.hp2
HG02165.hp2
HG02486.hp1
HG02523.hp1
HG02559.hp1
HG02622.hp2
HG02647.hp1
HG02698.hp1
HG02809.hp1
HG02895.hp1
HG02896.hp1
HG02897.hp2
HG02922.hp1
HG02965.hp1
HG02970.hp2
HG03017.hp1
HG03041.hp2
HG03139.hp1
HG03225.hp1
HG03239.hp2
HG03471.hp1
HG03486.hp1
HG03540.hp1
HG03654.hp1
HG03710.hp1
HG03831.hp1
HG03834.hp2
HG03942.hp1
HG04184.hp2
HG06807.hp2
NA18906.hp1
NA18941.hp1
NA18941.hp2
NA18947.hp2
NA18957.hp1
NA18960.hp1
NA18968.hp1
NA18969.hp2
NA18970.hp1
NA18978.hp2
NA18980.hp2
NA18981.hp2
NA18988.hp1
NA18999.hp2
NA19030.hp1
NA19043.hp1
NA19058.hp1
NA19066.hp1
NA19067.hp1
NA19078.hp1
NA19079.hp1
NA19082.hp1
NA19083.hp1
NA19088.hp1
NA19090.hp1
NA19090.hp2
NA20300.hp2
NA20752.hp1
NA21309.hp2
homoSapiens_chm13v2.hp1
 intron_variant MODIFIER c.165+215A>G
c.165+215A>G
SNX12 ENSG00000147164.12 transcript ENST00000374274.8 protein_coding 1/3 chrX 71067927
chrX:71067977 C
C
 A
A
 1 a0001c0001t0002g0032
a0001c0001t0002g0032
 1 NA18967.hp1
NA18967.hp1
 intron_variant MODIFIER c.165+165G>T
c.165+165G>T
SNX12 ENSG00000147164.12 transcript ENST00000374274.8 protein_coding 1/3 chrX 71067977
chrX:71067978 A
A
 C
C
 1 a0001c0001t0002g0032
a0001c0001t0002g0032
 1 NA18967.hp1
NA18967.hp1
 intron_variant MODIFIER c.165+164T>G
c.165+164T>G
SNX12 ENSG00000147164.12 transcript ENST00000374274.8 protein_coding 1/3 chrX 71067978
chrX:71067982 G
G
 A
A
 1 a0001c0001t0002g0032
a0001c0001t0002g0032
 1 NA18967.hp1
NA18967.hp1
 intron_variant MODIFIER c.165+160C>T
c.165+160C>T
SNX12 ENSG00000147164.12 transcript ENST00000374274.8 protein_coding 1/3 chrX 71067982
chrX:71067983 A
A
 G
G
 1 a0001c0001t0002g0032
a0001c0001t0002g0032
 1 NA18967.hp1
NA18967.hp1
 intron_variant MODIFIER c.165+159T>C
c.165+159T>C
SNX12 ENSG00000147164.12 transcript ENST00000374274.8 protein_coding 1/3 chrX 71067983
chrX:71067988 G
G
 C
C
 1 a0001c0001t0002g0032
a0001c0001t0002g0032
 1 NA18967.hp1
NA18967.hp1
 intron_variant MODIFIER c.165+154C>G
c.165+154C>G
SNX12 ENSG00000147164.12 transcript ENST00000374274.8 protein_coding 1/3 chrX 71067988
chrX:71067989 C
C
 G
G
 1 a0001c0001t0002g0032
a0001c0001t0002g0032
 1 NA18967.hp1
NA18967.hp1
 intron_variant MODIFIER c.165+153G>C
c.165+153G>C
SNX12 ENSG00000147164.12 transcript ENST00000374274.8 protein_coding 1/3 chrX 71067989
chrX:71067990 A
A
 T
T
 1 a0001c0001t0002g0032
a0001c0001t0002g0032
 1 NA18967.hp1
NA18967.hp1
 intron_variant MODIFIER c.165+152T>A
c.165+152T>A
SNX12 ENSG00000147164.12 transcript ENST00000374274.8 protein_coding 1/3 chrX 71067990
chrX:71067991 G
G
 GTT
GTT
 1 a0001c0001t0002g0032
a0001c0001t0002g0032
 1 NA18967.hp1
NA18967.hp1
 intron_variant MODIFIER c.165+150_165+151ins
others(2): Show 
c.165+150_165+151insAA
SNX12 ENSG00000147164.12 transcript ENST00000374274.8 protein_coding 1/3 chrX 71067991
chrX:71068031 A
A
 AC
AC
 1 a0001c0001t0001g0031
a0001c0001t0001g0031
 1 HG02155.hp2
HG02155.hp2
 intron_variant MODIFIER c.165+110dupG
c.165+110dupG
SNX12 ENSG00000147164.12 transcript ENST00000374274.8 protein_coding 1/3 chrX 71068031
chrX:71068032 C
C
 T
T
 1 a0001c0001t0001g0030
a0001c0001t0001g0030
 1 HG03490.hp1
HG03490.hp1
 intron_variant MODIFIER c.165+110G>A
c.165+110G>A
SNX12 ENSG00000147164.12 transcript ENST00000374274.8 protein_coding 1/3 chrX 71068032
chrX:71068067 G
G
 C
C
 1 a0001c0001t0001g0105
a0001c0001t0001g0105
 1 HG02976.hp1
HG02976.hp1
 intron_variant MODIFIER c.165+75C>G
c.165+75C>G
SNX12 ENSG00000147164.12 transcript ENST00000374274.8 protein_coding 1/3 chrX 71068067

  • GeneCards
  • OpenTarget
  • The Human Protein Atlas
  • Gnomad v4.1.0
  • PhewebJP (Japan)
  • UKB-TOPMed (UMich) (UK and US)
  • FinnGen r11 (Finland)
  • KoGES (Korean)
  • Mouse Phenotype
  • Zebra Phenotype
  • TogoVar

  • DNA
  • Satellite
  • All Snps 1.4.2
  • RC
  • snRNA
  • SINE
  • GC %
  • Simple_repeat
  • RNA
  • Retroposon
  • Unknown
  • Low_complexity
  • LINE
  • scRNA
  • CpG Islands
  • Phastcons (20 way)
  • srpRNA
  • Common Snps 1.4.2
  • rRNA
  • LTR
  • tRNA

  • Axiom Genome-Wide Array (Japonica Array V1)
  • Axiom Genome-Wide Array (Japonica Array V2)
  • Axiom Genome-Wide ASI Array V1 (ASI V1)
​

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