Joint Open Genome and Omics Platform (JoGo)

Search by Genic region

geneid	1510
ensemblid	ENSG00000196188.12
hgncid	2530
symbol	CTSE
name	cathepsin E
refseq_nuc	NM_001910.4
refseq_prot	NP_001901.1
ensembl_nuc	ENST00000358184.7
ensembl_prot	ENSP00000350911.2
mane_status	MANE Select
chr	chr1
start	206009264
end	206023895
strand	-
ver	v1.2
region	chr1:206009264-206023895
region5000	chr1:206004264-206028895
regionname0	CTSE_chr1_206009264_206023895
regionname5000	CTSE_chr1_206004264_206028895

ahapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	alen	total	AFR	AMR	EAS	EUR	SAS	JPT	regionname	genename	aa	chr	start	end
a0001	1/1	396	270	80	58	85	12	33	49	CTSE_chr1_206004264_206028895	CTSE	copy fasta	chr1	206004264	206028895
a0002	0/0	396	19	14	3	0	2	0	0	CTSE_chr1_206004264_206028895	CTSE	copy fasta	chr1	206004264	206028895
a0003	0/0	396	4	0	0	4	0	0	3	CTSE_chr1_206004264_206028895	CTSE	copy fasta	chr1	206004264	206028895
a0004	0/0	396	3	0	3	0	0	0	0	CTSE_chr1_206004264_206028895	CTSE	copy fasta	chr1	206004264	206028895
a0005	0/0	396	2	2	0	0	0	0	0	CTSE_chr1_206004264_206028895	CTSE	copy fasta	chr1	206004264	206028895
a0006	0/0	396	1	1	0	0	0	0	0	CTSE_chr1_206004264_206028895	CTSE	copy fasta	chr1	206004264	206028895
a0007	0/0	396	1	1	0	0	0	0	0	CTSE_chr1_206004264_206028895	CTSE	copy fasta	chr1	206004264	206028895
a0008	0/0	396	1	0	0	1	0	0	0	CTSE_chr1_206004264_206028895	CTSE	copy fasta	chr1	206004264	206028895
a0009	0/0	396	1	0	0	0	0	1	0	CTSE_chr1_206004264_206028895	CTSE	copy fasta	chr1	206004264	206028895

chapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	clen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	cseq	chr	start	end
c0001	1/1	1191	209	36	45	84	10	32	CTSE_chr1_206004264_206028895	CTSE	copy fasta	chr1	206004264	206028895
c0002	0/0	1191	40	25	11	1	2	1	CTSE_chr1_206004264_206028895	CTSE	copy fasta	chr1	206004264	206028895
c0003	0/0	1191	16	15	1	0	0	0	CTSE_chr1_206004264_206028895	CTSE	copy fasta	chr1	206004264	206028895
c0004	0/0	1191	12	7	3	0	2	0	CTSE_chr1_206004264_206028895	CTSE	copy fasta	chr1	206004264	206028895
c0005	0/0	1191	5	5	0	0	0	0	CTSE_chr1_206004264_206028895	CTSE	copy fasta	chr1	206004264	206028895
c0006	0/0	1191	4	0	0	4	0	0	CTSE_chr1_206004264_206028895	CTSE	copy fasta	chr1	206004264	206028895
c0007	0/0	1191	3	3	0	0	0	0	CTSE_chr1_206004264_206028895	CTSE	copy fasta	chr1	206004264	206028895
c0008	0/0	1191	3	0	3	0	0	0	CTSE_chr1_206004264_206028895	CTSE	copy fasta	chr1	206004264	206028895
c0009	0/0	1191	2	2	0	0	0	0	CTSE_chr1_206004264_206028895	CTSE	copy fasta	chr1	206004264	206028895
c0010	0/0	1191	2	2	0	0	0	0	CTSE_chr1_206004264_206028895	CTSE	copy fasta	chr1	206004264	206028895
c0011	0/0	1191	1	0	0	0	0	1	CTSE_chr1_206004264_206028895	CTSE	copy fasta	chr1	206004264	206028895
c0012	0/0	1191	1	0	1	0	0	0	CTSE_chr1_206004264_206028895	CTSE	copy fasta	chr1	206004264	206028895
c0013	0/0	1191	1	1	0	0	0	0	CTSE_chr1_206004264_206028895	CTSE	copy fasta	chr1	206004264	206028895
c0014	0/0	1191	1	1	0	0	0	0	CTSE_chr1_206004264_206028895	CTSE	copy fasta	chr1	206004264	206028895
c0015	0/0	1191	1	0	0	1	0	0	CTSE_chr1_206004264_206028895	CTSE	copy fasta	chr1	206004264	206028895
c0016	0/0	1191	1	1	0	0	0	0	CTSE_chr1_206004264_206028895	CTSE	copy fasta	chr1	206004264	206028895

thapid	grch38 chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	tlen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	tseq	chr	start	end
t0001	1/1	1024	225	34	58	88	12	31	CTSE_chr1_206004264_206028895	CTSE	copy fasta	chr1	206004264	206028895
t0002	0/0	1024	34	28	2	0	2	2	CTSE_chr1_206004264_206028895	CTSE	copy fasta	chr1	206004264	206028895
t0003	0/0	1024	6	6	0	0	0	0	CTSE_chr1_206004264_206028895	CTSE	copy fasta	chr1	206004264	206028895
t0004	0/0	1024	5	5	0	0	0	0	CTSE_chr1_206004264_206028895	CTSE	copy fasta	chr1	206004264	206028895
t0005	0/0	1024	4	4	0	0	0	0	CTSE_chr1_206004264_206028895	CTSE	copy fasta	chr1	206004264	206028895
t0006	0/0	1024	3	3	0	0	0	0	CTSE_chr1_206004264_206028895	CTSE	copy fasta	chr1	206004264	206028895
t0007	0/0	1024	3	3	0	0	0	0	CTSE_chr1_206004264_206028895	CTSE	copy fasta	chr1	206004264	206028895
t0008	0/0	1024	3	2	1	0	0	0	CTSE_chr1_206004264_206028895	CTSE	copy fasta	chr1	206004264	206028895
t0009	0/0	1024	2	0	2	0	0	0	CTSE_chr1_206004264_206028895	CTSE	copy fasta	chr1	206004264	206028895
t0010	0/0	1024	2	2	0	0	0	0	CTSE_chr1_206004264_206028895	CTSE	copy fasta	chr1	206004264	206028895
t0011	0/0	1024	2	2	0	0	0	0	CTSE_chr1_206004264_206028895	CTSE	copy fasta	chr1	206004264	206028895
t0012	0/0	1024	2	2	0	0	0	0	CTSE_chr1_206004264_206028895	CTSE	copy fasta	chr1	206004264	206028895
t0013	0/0	1024	2	2	0	0	0	0	CTSE_chr1_206004264_206028895	CTSE	copy fasta	chr1	206004264	206028895
t0014	0/0	1024	1	1	0	0	0	0	CTSE_chr1_206004264_206028895	CTSE	copy fasta	chr1	206004264	206028895
t0015	0/0	1024	1	1	0	0	0	0	CTSE_chr1_206004264_206028895	CTSE	copy fasta	chr1	206004264	206028895
t0016	0/0	1024	1	1	0	0	0	0	CTSE_chr1_206004264_206028895	CTSE	copy fasta	chr1	206004264	206028895
t0017	0/0	1024	1	1	0	0	0	0	CTSE_chr1_206004264_206028895	CTSE	copy fasta	chr1	206004264	206028895
t0018	0/0	1024	1	0	0	1	0	0	CTSE_chr1_206004264_206028895	CTSE	copy fasta	chr1	206004264	206028895
t0019	0/0	1024	1	0	1	0	0	0	CTSE_chr1_206004264_206028895	CTSE	copy fasta	chr1	206004264	206028895
t0020	0/0	1024	1	0	0	1	0	0	CTSE_chr1_206004264_206028895	CTSE	copy fasta	chr1	206004264	206028895
t0021	0/0	1024	1	1	0	0	0	0	CTSE_chr1_206004264_206028895	CTSE	copy fasta	chr1	206004264	206028895
t0022	0/0	1024	1	0	0	0	0	1	CTSE_chr1_206004264_206028895	CTSE	copy fasta	chr1	206004264	206028895

ghapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	chr	start	end
g0001	0/0	78	2	26	36	5	9	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
g0002	0/0	28	0	7	15	3	3	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
g0003	0/0	11	3	6	1	1	0	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
g0004	0/0	9	0	2	0	1	6	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
g0005	0/0	8	0	0	8	0	0	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
g0006	0/0	7	7	0	0	0	0	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
g0007	0/0	6	6	0	0	0	0	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
g0008	0/0	6	0	0	0	0	6	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
g0009	0/0	5	5	0	0	0	0	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
g0010	0/0	5	5	0	0	0	0	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
g0011	0/0	4	4	0	0	0	0	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
g0012	0/0	4	0	0	4	0	0	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
g0013	0/0	4	4	0	0	0	0	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
g0014	0/0	4	4	0	0	0	0	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
g0015	0/0	3	3	0	0	0	0	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
g0016	0/0	3	3	0	0	0	0	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
g0017	0/0	3	0	1	0	2	0	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
g0018	0/0	3	0	3	0	0	0	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
g0019	0/1	3	0	1	0	1	0	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
g0020	0/0	3	0	2	0	1	0	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
g0021	0/0	2	2	0	0	0	0	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
g0022	0/0	2	2	0	0	0	0	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
g0023	0/0	2	1	1	0	0	0	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
g0024	0/0	2	2	0	0	0	0	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
g0025	0/0	2	0	2	0	0	0	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
g0026	0/0	2	2	0	0	0	0	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
g0027	0/0	2	0	0	2	0	0	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
g0028	0/0	2	0	0	2	0	0	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
g0029	0/0	2	0	0	2	0	0	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
g0030	0/0	2	2	0	0	0	0	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
g0031	0/0	2	0	0	2	0	0	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
g0032	0/0	2	0	1	0	0	1	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
g0033	0/0	2	0	2	0	0	0	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
g0034	0/0	2	0	0	0	0	2	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
g0035	0/0	2	2	0	0	0	0	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
g0036	0/0	2	0	0	2	0	0	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
g0037	0/0	2	0	0	2	0	0	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
g0038	0/0	2	2	0	0	0	0	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
g0039	0/0	1	1	0	0	0	0	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
g0040	0/0	1	1	0	0	0	0	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
g0041	0/0	1	1	0	0	0	0	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
g0042	0/0	1	0	0	0	0	1	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
g0043	0/0	1	1	0	0	0	0	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
g0044	0/0	1	0	0	0	0	1	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
g0045	0/0	1	1	0	0	0	0	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
g0046	0/0	1	1	0	0	0	0	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
g0047	0/0	1	1	0	0	0	0	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
g0048	0/0	1	1	0	0	0	0	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
g0049	0/0	1	1	0	0	0	0	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
g0050	0/0	1	1	0	0	0	0	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
g0051	0/0	1	1	0	0	0	0	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
g0052	0/0	1	1	0	0	0	0	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
g0053	0/0	1	1	0	0	0	0	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
g0054	0/0	1	1	0	0	0	0	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
g0055	0/0	1	1	0	0	0	0	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
g0056	0/0	1	0	0	1	0	0	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
g0057	0/0	1	1	0	0	0	0	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
g0058	0/0	1	1	0	0	0	0	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
g0059	0/0	1	1	0	0	0	0	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
g0060	0/0	1	0	1	0	0	0	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
g0061	0/0	1	0	1	0	0	0	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
g0062	0/0	1	0	0	1	0	0	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
g0063	0/0	1	0	0	1	0	0	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
g0064	0/0	1	0	0	0	0	1	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
g0065	0/0	1	0	1	0	0	0	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
g0066	0/0	1	1	0	0	0	0	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
g0067	0/0	1	0	0	0	0	1	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
g0068	0/0	1	1	0	0	0	0	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
g0069	0/0	1	1	0	0	0	0	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
g0070	0/0	1	0	0	0	0	1	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
g0071	0/0	1	0	1	0	0	0	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
g0072	0/0	1	0	0	1	0	0	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
g0073	0/0	1	0	1	0	0	0	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
g0074	0/0	1	0	0	1	0	0	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
g0075	0/0	1	0	0	1	0	0	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
g0076	0/0	1	0	0	1	0	0	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
g0077	0/0	1	1	0	0	0	0	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
g0078	0/0	1	0	0	1	0	0	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
g0079	0/0	1	0	0	0	0	1	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
g0080	0/0	1	1	0	0	0	0	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
g0081	0/0	1	1	0	0	0	0	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
g0082	0/0	1	1	0	0	0	0	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
g0083	0/0	1	1	0	0	0	0	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
g0084	0/0	1	0	0	1	0	0	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
g0085	0/0	1	1	0	0	0	0	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
g0086	0/0	1	0	0	1	0	0	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
g0087	0/0	1	0	1	0	0	0	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
g0088	0/0	1	0	0	1	0	0	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
g0089	0/0	1	0	0	1	0	0	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
g0090	0/0	1	0	1	0	0	0	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
g0091	0/0	1	1	0	0	0	0	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
g0092	0/0	1	0	0	1	0	0	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
g0093	1/0	1	0	0	0	0	0	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
g0094	0/0	1	1	0	0	0	0	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
g0095	0/0	1	1	0	0	0	0	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
g0096	0/0	1	1	0	0	0	0	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
g0097	0/0	1	1	0	0	0	0	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
g0098	0/0	1	0	0	0	0	1	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
g0099	0/0	1	0	1	0	0	0	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
g0100	0/0	1	0	1	0	0	0	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
g0101	0/0	1	1	0	0	0	0	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
g0102	0/0	1	1	0	0	0	0	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
g0103	0/0	1	1	0	0	0	0	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
g0104	0/0	1	1	0	0	0	0	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
g0105	0/0	1	1	0	0	0	0	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
g0106	0/0	1	0	0	1	0	0	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
g0107	0/0	1	0	1	0	0	0	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895

achapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	clen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	cseq	chr	start	end
a0001c0001	1/1	1191	209	36	45	84	10	32	CTSE_chr1_206004264_206028895	CTSE	copy fasta	chr1	206004264	206028895
a0001c0002	0/0	1191	40	25	11	1	2	1	CTSE_chr1_206004264_206028895	CTSE	copy fasta	chr1	206004264	206028895
a0001c0003	0/0	1191	16	15	1	0	0	0	CTSE_chr1_206004264_206028895	CTSE	copy fasta	chr1	206004264	206028895
a0001c0007	0/0	1191	3	3	0	0	0	0	CTSE_chr1_206004264_206028895	CTSE	copy fasta	chr1	206004264	206028895
a0001c0012	0/0	1191	1	0	1	0	0	0	CTSE_chr1_206004264_206028895	CTSE	copy fasta	chr1	206004264	206028895
a0001c0014	0/0	1191	1	1	0	0	0	0	CTSE_chr1_206004264_206028895	CTSE	copy fasta	chr1	206004264	206028895
a0002c0004	0/0	1191	12	7	3	0	2	0	CTSE_chr1_206004264_206028895	CTSE	copy fasta	chr1	206004264	206028895
a0002c0005	0/0	1191	5	5	0	0	0	0	CTSE_chr1_206004264_206028895	CTSE	copy fasta	chr1	206004264	206028895
a0002c0010	0/0	1191	2	2	0	0	0	0	CTSE_chr1_206004264_206028895	CTSE	copy fasta	chr1	206004264	206028895
a0003c0006	0/0	1191	4	0	0	4	0	0	CTSE_chr1_206004264_206028895	CTSE	copy fasta	chr1	206004264	206028895
a0004c0008	0/0	1191	3	0	3	0	0	0	CTSE_chr1_206004264_206028895	CTSE	copy fasta	chr1	206004264	206028895
a0005c0009	0/0	1191	2	2	0	0	0	0	CTSE_chr1_206004264_206028895	CTSE	copy fasta	chr1	206004264	206028895
a0006c0016	0/0	1191	1	1	0	0	0	0	CTSE_chr1_206004264_206028895	CTSE	copy fasta	chr1	206004264	206028895
a0007c0013	0/0	1191	1	1	0	0	0	0	CTSE_chr1_206004264_206028895	CTSE	copy fasta	chr1	206004264	206028895
a0008c0015	0/0	1191	1	0	0	1	0	0	CTSE_chr1_206004264_206028895	CTSE	copy fasta	chr1	206004264	206028895
a0009c0011	0/0	1191	1	0	0	0	0	1	CTSE_chr1_206004264_206028895	CTSE	copy fasta	chr1	206004264	206028895

acthapid	grch38 chm13v2	tlen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	tseq	chr	start	end
a0001c0001t0001	1/1	2214	181	13	43	82	10	31	CTSE_chr1_206004264_206028895	CTSE	copy fasta	chr1	206004264	206028895
a0001c0001t0002	0/0	2214	6	5	0	0	0	1	CTSE_chr1_206004264_206028895	CTSE	copy fasta	chr1	206004264	206028895
a0001c0001t0003	0/0	2214	2	2	0	0	0	0	CTSE_chr1_206004264_206028895	CTSE	copy fasta	chr1	206004264	206028895
a0001c0001t0004	0/0	2214	5	5	0	0	0	0	CTSE_chr1_206004264_206028895	CTSE	copy fasta	chr1	206004264	206028895
a0001c0001t0006	0/0	2214	3	3	0	0	0	0	CTSE_chr1_206004264_206028895	CTSE	copy fasta	chr1	206004264	206028895
a0001c0001t0008	0/0	2214	2	1	1	0	0	0	CTSE_chr1_206004264_206028895	CTSE	copy fasta	chr1	206004264	206028895
a0001c0001t0010	0/0	2214	2	2	0	0	0	0	CTSE_chr1_206004264_206028895	CTSE	copy fasta	chr1	206004264	206028895
a0001c0001t0011	0/0	2214	1	1	0	0	0	0	CTSE_chr1_206004264_206028895	CTSE	copy fasta	chr1	206004264	206028895
a0001c0001t0012	0/0	2214	2	2	0	0	0	0	CTSE_chr1_206004264_206028895	CTSE	copy fasta	chr1	206004264	206028895
a0001c0001t0015	0/0	2214	1	1	0	0	0	0	CTSE_chr1_206004264_206028895	CTSE	copy fasta	chr1	206004264	206028895
a0001c0001t0017	0/0	2214	1	1	0	0	0	0	CTSE_chr1_206004264_206028895	CTSE	copy fasta	chr1	206004264	206028895
a0001c0001t0018	0/0	2214	1	0	0	1	0	0	CTSE_chr1_206004264_206028895	CTSE	copy fasta	chr1	206004264	206028895
a0001c0001t0019	0/0	2214	1	0	1	0	0	0	CTSE_chr1_206004264_206028895	CTSE	copy fasta	chr1	206004264	206028895
a0001c0001t0020	0/0	2214	1	0	0	1	0	0	CTSE_chr1_206004264_206028895	CTSE	copy fasta	chr1	206004264	206028895
a0001c0002t0001	0/0	2214	30	16	11	1	2	0	CTSE_chr1_206004264_206028895	CTSE	copy fasta	chr1	206004264	206028895
a0001c0002t0002	0/0	2214	6	6	0	0	0	0	CTSE_chr1_206004264_206028895	CTSE	copy fasta	chr1	206004264	206028895
a0001c0002t0007	0/0	2214	2	2	0	0	0	0	CTSE_chr1_206004264_206028895	CTSE	copy fasta	chr1	206004264	206028895
a0001c0002t0014	0/0	2214	1	1	0	0	0	0	CTSE_chr1_206004264_206028895	CTSE	copy fasta	chr1	206004264	206028895
a0001c0002t0022	0/0	2214	1	0	0	0	0	1	CTSE_chr1_206004264_206028895	CTSE	copy fasta	chr1	206004264	206028895
a0001c0003t0002	0/0	2214	10	9	1	0	0	0	CTSE_chr1_206004264_206028895	CTSE	copy fasta	chr1	206004264	206028895
a0001c0003t0005	0/0	2214	4	4	0	0	0	0	CTSE_chr1_206004264_206028895	CTSE	copy fasta	chr1	206004264	206028895
a0001c0003t0013	0/0	2214	2	2	0	0	0	0	CTSE_chr1_206004264_206028895	CTSE	copy fasta	chr1	206004264	206028895
a0001c0007t0008	0/0	2214	1	1	0	0	0	0	CTSE_chr1_206004264_206028895	CTSE	copy fasta	chr1	206004264	206028895
a0001c0007t0011	0/0	2214	1	1	0	0	0	0	CTSE_chr1_206004264_206028895	CTSE	copy fasta	chr1	206004264	206028895
a0001c0007t0021	0/0	2214	1	1	0	0	0	0	CTSE_chr1_206004264_206028895	CTSE	copy fasta	chr1	206004264	206028895
a0001c0012t0001	0/0	2214	1	0	1	0	0	0	CTSE_chr1_206004264_206028895	CTSE	copy fasta	chr1	206004264	206028895
a0001c0014t0007	0/0	2214	1	1	0	0	0	0	CTSE_chr1_206004264_206028895	CTSE	copy fasta	chr1	206004264	206028895
a0002c0004t0002	0/0	2214	10	7	1	0	2	0	CTSE_chr1_206004264_206028895	CTSE	copy fasta	chr1	206004264	206028895
a0002c0004t0009	0/0	2214	2	0	2	0	0	0	CTSE_chr1_206004264_206028895	CTSE	copy fasta	chr1	206004264	206028895
a0002c0005t0003	0/0	2214	4	4	0	0	0	0	CTSE_chr1_206004264_206028895	CTSE	copy fasta	chr1	206004264	206028895
a0002c0005t0016	0/0	2214	1	1	0	0	0	0	CTSE_chr1_206004264_206028895	CTSE	copy fasta	chr1	206004264	206028895
a0002c0010t0001	0/0	2214	1	1	0	0	0	0	CTSE_chr1_206004264_206028895	CTSE	copy fasta	chr1	206004264	206028895
a0002c0010t0002	0/0	2214	1	1	0	0	0	0	CTSE_chr1_206004264_206028895	CTSE	copy fasta	chr1	206004264	206028895
a0003c0006t0001	0/0	2214	4	0	0	4	0	0	CTSE_chr1_206004264_206028895	CTSE	copy fasta	chr1	206004264	206028895
a0004c0008t0001	0/0	2214	3	0	3	0	0	0	CTSE_chr1_206004264_206028895	CTSE	copy fasta	chr1	206004264	206028895
a0005c0009t0001	0/0	2214	2	2	0	0	0	0	CTSE_chr1_206004264_206028895	CTSE	copy fasta	chr1	206004264	206028895
a0006c0016t0001	0/0	2214	1	1	0	0	0	0	CTSE_chr1_206004264_206028895	CTSE	copy fasta	chr1	206004264	206028895
a0007c0013t0001	0/0	2214	1	1	0	0	0	0	CTSE_chr1_206004264_206028895	CTSE	copy fasta	chr1	206004264	206028895
a0008c0015t0001	0/0	2214	1	0	0	1	0	0	CTSE_chr1_206004264_206028895	CTSE	copy fasta	chr1	206004264	206028895
a0009c0011t0002	0/0	2214	1	0	0	0	0	1	CTSE_chr1_206004264_206028895	CTSE	copy fasta	chr1	206004264	206028895

actghapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	chr	start	end
a0001c0001t0001g0001	0/0	78	2	26	36	5	9	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
a0001c0001t0001g0002	0/0	28	0	7	15	3	3	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
a0001c0001t0001g0004	0/0	9	0	2	0	1	6	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
a0001c0001t0001g0005	0/0	8	0	0	8	0	0	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
a0001c0001t0001g0008	0/0	6	0	0	0	0	6	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
a0001c0001t0001g0014	0/0	4	4	0	0	0	0	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
a0001c0001t0001g0019	0/1	3	0	1	0	1	0	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
a0001c0001t0001g0027	0/0	2	0	0	2	0	0	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
a0001c0001t0001g0028	0/0	2	0	0	2	0	0	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
a0001c0001t0001g0029	0/0	2	0	0	2	0	0	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
a0001c0001t0001g0030	0/0	2	2	0	0	0	0	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
a0001c0001t0001g0031	0/0	2	0	0	2	0	0	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
a0001c0001t0001g0032	0/0	2	0	1	0	0	1	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
a0001c0001t0001g0034	0/0	2	0	0	0	0	2	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
a0001c0001t0001g0036	0/0	2	0	0	2	0	0	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
a0001c0001t0001g0037	0/0	2	0	0	2	0	0	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
a0001c0001t0001g0058	0/0	1	1	0	0	0	0	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
a0001c0001t0001g0061	0/0	1	0	1	0	0	0	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
a0001c0001t0001g0062	0/0	1	0	0	1	0	0	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
a0001c0001t0001g0063	0/0	1	0	0	1	0	0	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
a0001c0001t0001g0064	0/0	1	0	0	0	0	1	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
a0001c0001t0001g0065	0/0	1	0	1	0	0	0	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
a0001c0001t0001g0066	0/0	1	1	0	0	0	0	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
a0001c0001t0001g0067	0/0	1	0	0	0	0	1	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
a0001c0001t0001g0070	0/0	1	0	0	0	0	1	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
a0001c0001t0001g0071	0/0	1	0	1	0	0	0	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
a0001c0001t0001g0073	0/0	1	0	1	0	0	0	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
a0001c0001t0001g0074	0/0	1	0	0	1	0	0	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
a0001c0001t0001g0075	0/0	1	0	0	1	0	0	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
a0001c0001t0001g0076	0/0	1	0	0	1	0	0	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
a0001c0001t0001g0078	0/0	1	0	0	1	0	0	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
a0001c0001t0001g0079	0/0	1	0	0	0	0	1	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
a0001c0001t0001g0080	0/0	1	1	0	0	0	0	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
a0001c0001t0001g0083	0/0	1	1	0	0	0	0	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
a0001c0001t0001g0086	0/0	1	0	0	1	0	0	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
a0001c0001t0001g0088	0/0	1	0	0	1	0	0	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
a0001c0001t0001g0089	0/0	1	0	0	1	0	0	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
a0001c0001t0001g0090	0/0	1	0	1	0	0	0	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
a0001c0001t0001g0092	0/0	1	0	0	1	0	0	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
a0001c0001t0001g0093	1/0	1	0	0	0	0	0	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
a0001c0001t0001g0104	0/0	1	1	0	0	0	0	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
a0001c0001t0001g0106	0/0	1	0	0	1	0	0	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
a0001c0001t0001g0107	0/0	1	0	1	0	0	0	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
a0001c0001t0002g0015	0/0	3	3	0	0	0	0	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
a0001c0001t0002g0041	0/0	1	1	0	0	0	0	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
a0001c0001t0002g0044	0/0	1	0	0	0	0	1	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
a0001c0001t0002g0052	0/0	1	1	0	0	0	0	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
a0001c0001t0003g0057	0/0	1	1	0	0	0	0	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
a0001c0001t0003g0069	0/0	1	1	0	0	0	0	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
a0001c0001t0004g0010	0/0	5	5	0	0	0	0	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
a0001c0001t0006g0016	0/0	3	3	0	0	0	0	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
a0001c0001t0008g0060	0/0	1	0	1	0	0	0	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
a0001c0001t0008g0105	0/0	1	1	0	0	0	0	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
a0001c0001t0010g0021	0/0	2	2	0	0	0	0	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
a0001c0001t0011g0055	0/0	1	1	0	0	0	0	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
a0001c0001t0012g0038	0/0	2	2	0	0	0	0	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
a0001c0001t0015g0045	0/0	1	1	0	0	0	0	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
a0001c0001t0017g0043	0/0	1	1	0	0	0	0	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
a0001c0001t0018g0056	0/0	1	0	0	1	0	0	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
a0001c0001t0019g0087	0/0	1	0	1	0	0	0	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
a0001c0001t0020g0072	0/0	1	0	0	1	0	0	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
a0001c0002t0001g0003	0/0	11	3	6	1	1	0	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
a0001c0002t0001g0006	0/0	7	7	0	0	0	0	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
a0001c0002t0001g0020	0/0	3	0	2	0	1	0	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
a0001c0002t0001g0026	0/0	2	2	0	0	0	0	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
a0001c0002t0001g0033	0/0	2	0	2	0	0	0	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
a0001c0002t0001g0035	0/0	2	2	0	0	0	0	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
a0001c0002t0001g0100	0/0	1	0	1	0	0	0	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
a0001c0002t0001g0101	0/0	1	1	0	0	0	0	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
a0001c0002t0001g0102	0/0	1	1	0	0	0	0	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
a0001c0002t0002g0024	0/0	2	2	0	0	0	0	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
a0001c0002t0002g0040	0/0	1	1	0	0	0	0	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
a0001c0002t0002g0046	0/0	1	1	0	0	0	0	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
a0001c0002t0002g0049	0/0	1	1	0	0	0	0	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
a0001c0002t0002g0050	0/0	1	1	0	0	0	0	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
a0001c0002t0007g0094	0/0	1	1	0	0	0	0	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
a0001c0002t0007g0096	0/0	1	1	0	0	0	0	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
a0001c0002t0014g0048	0/0	1	1	0	0	0	0	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
a0001c0002t0022g0098	0/0	1	0	0	0	0	1	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
a0001c0003t0002g0009	0/0	5	5	0	0	0	0	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
a0001c0003t0002g0022	0/0	2	2	0	0	0	0	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
a0001c0003t0002g0023	0/0	2	1	1	0	0	0	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
a0001c0003t0002g0047	0/0	1	1	0	0	0	0	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
a0001c0003t0005g0011	0/0	4	4	0	0	0	0	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
a0001c0003t0013g0059	0/0	1	1	0	0	0	0	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
a0001c0003t0013g0097	0/0	1	1	0	0	0	0	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
a0001c0007t0008g0068	0/0	1	1	0	0	0	0	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
a0001c0007t0011g0051	0/0	1	1	0	0	0	0	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
a0001c0007t0021g0077	0/0	1	1	0	0	0	0	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
a0001c0012t0001g0099	0/0	1	0	1	0	0	0	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
a0001c0014t0007g0095	0/0	1	1	0	0	0	0	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
a0002c0004t0002g0007	0/0	6	6	0	0	0	0	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
a0002c0004t0002g0017	0/0	3	0	1	0	2	0	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
a0002c0004t0002g0053	0/0	1	1	0	0	0	0	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
a0002c0004t0009g0025	0/0	2	0	2	0	0	0	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
a0002c0005t0003g0013	0/0	4	4	0	0	0	0	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
a0002c0005t0016g0039	0/0	1	1	0	0	0	0	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
a0002c0010t0001g0103	0/0	1	1	0	0	0	0	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
a0002c0010t0002g0054	0/0	1	1	0	0	0	0	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
a0003c0006t0001g0012	0/0	4	0	0	4	0	0	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
a0004c0008t0001g0018	0/0	3	0	3	0	0	0	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
a0005c0009t0001g0081	0/0	1	1	0	0	0	0	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
a0005c0009t0001g0082	0/0	1	1	0	0	0	0	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
a0006c0016t0001g0085	0/0	1	1	0	0	0	0	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
a0007c0013t0001g0091	0/0	1	1	0	0	0	0	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
a0008c0015t0001g0084	0/0	1	0	0	1	0	0	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
a0009c0011t0002g0042	0/0	1	0	0	0	0	1	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895

sampleid	ID haplotypeid	ahapid	chapid	thapid	ghapid	gpopname	popname	regionname	genename	chr	start	end
HG00099	hp1	a0001	c0001	t0001	g0002	EUR	GBR	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
HG00099	hp2	a0001	c0001	t0001	g0019	EUR	GBR	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
HG00140	hp1	a0001	c0001	t0001	g0001	EUR	GBR	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
HG00140	hp2	a0001	c0002	t0001	g0020	EUR	GBR	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
HG00423	hp1	a0001	c0001	t0001	g0002	EAS	CHS	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
HG00423	hp2	a0001	c0002	t0001	g0003	EAS	CHS	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
HG00438	hp1	a0001	c0001	t0001	g0002	EAS	CHS	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
HG00438	hp2	a0001	c0001	t0001	g0001	EAS	CHS	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
HG00544	hp1	a0001	c0001	t0001	g0001	EAS	CHS	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
HG00544	hp2	a0001	c0001	t0001	g0029	EAS	CHS	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
HG00558	hp1	a0001	c0001	t0001	g0001	EAS	CHS	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
HG00558	hp2	a0001	c0001	t0001	g0005	EAS	CHS	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
HG00597	hp1	a0001	c0001	t0001	g0062	EAS	CHS	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
HG00597	hp2	a0001	c0001	t0001	g0002	EAS	CHS	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
HG00609	hp1	a0001	c0001	t0001	g0001	EAS	CHS	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
HG00609	hp2	a0001	c0001	t0001	g0029	EAS	CHS	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
HG00621	hp1	a0003	c0006	t0001	g0012	EAS	CHS	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
HG00621	hp2	a0001	c0001	t0001	g0001	EAS	CHS	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
HG00639	hp1	a0001	c0001	t0001	g0001	AMR	PUR	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
HG00639	hp2	a0001	c0001	t0001	g0002	AMR	PUR	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
HG00642	hp1	a0001	c0012	t0001	g0099	AMR	PUR	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
HG00642	hp2	a0001	c0001	t0001	g0001	AMR	PUR	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
HG00673	hp1	a0001	c0001	t0001	g0001	EAS	CHS	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
HG00673	hp2	a0001	c0001	t0001	g0001	EAS	CHS	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
HG00733	hp1	a0004	c0008	t0001	g0018	AMR	PUR	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
HG00733	hp2	a0001	c0001	t0001	g0001	AMR	PUR	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
HG00738	hp1	a0001	c0001	t0019	g0087	AMR	PUR	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
HG00738	hp2	a0004	c0008	t0001	g0018	AMR	PUR	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
HG00741	hp1	a0001	c0001	t0001	g0004	AMR	PUR	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
HG00741	hp2	a0001	c0001	t0001	g0001	AMR	PUR	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
HG01069	hp1	a0002	c0004	t0009	g0025	AMR	PUR	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
HG01069	hp2	a0001	c0001	t0001	g0019	AMR	PUR	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
HG01070	hp1	a0001	c0002	t0001	g0003	AMR	PUR	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
HG01070	hp2	a0001	c0001	t0001	g0065	AMR	PUR	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
HG01071	hp1	a0001	c0002	t0001	g0003	AMR	PUR	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
HG01071	hp2	a0002	c0004	t0009	g0025	AMR	PUR	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
HG01074	hp1	a0001	c0001	t0001	g0001	AMR	PUR	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
HG01074	hp2	a0004	c0008	t0001	g0018	AMR	PUR	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
HG01099	hp1	a0001	c0001	t0001	g0001	AMR	PUR	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
HG01099	hp2	a0001	c0002	t0001	g0003	AMR	PUR	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
HG01106	hp1	a0001	c0001	t0001	g0071	AMR	PUR	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
HG01106	hp2	a0001	c0001	t0001	g0001	AMR	PUR	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
HG01109	hp1	a0001	c0001	t0008	g0060	AMR	PUR	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
HG01109	hp2	a0001	c0001	t0001	g0107	AMR	PUR	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
HG01175	hp1	a0001	c0001	t0001	g0032	AMR	PUR	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
HG01175	hp2	a0001	c0001	t0001	g0001	AMR	PUR	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
HG01192	hp1	a0001	c0001	t0001	g0001	AMR	PUR	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
HG01192	hp2	a0001	c0002	t0001	g0100	AMR	PUR	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
HG01243	hp1	a0001	c0001	t0001	g0001	AMR	PUR	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
HG01243	hp2	a0001	c0003	t0002	g0023	AMR	PUR	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
HG01257	hp1	a0001	c0001	t0001	g0001	AMR	CLM	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
HG01257	hp2	a0001	c0002	t0001	g0033	AMR	CLM	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
HG01258	hp1	a0001	c0002	t0001	g0033	AMR	CLM	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
HG01258	hp2	a0001	c0001	t0001	g0001	AMR	CLM	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
HG01261	hp1	a0001	c0002	t0001	g0020	AMR	CLM	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
HG01261	hp2	a0001	c0001	t0001	g0001	AMR	CLM	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
HG01346	hp1	a0001	c0002	t0001	g0003	AMR	CLM	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
HG01346	hp2	a0001	c0001	t0001	g0001	AMR	CLM	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
HG01358	hp1	a0001	c0002	t0001	g0003	AMR	CLM	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
HG01358	hp2	a0001	c0001	t0001	g0001	AMR	CLM	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
HG01361	hp1	a0001	c0002	t0001	g0003	AMR	CLM	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
HG01361	hp2	a0001	c0001	t0001	g0002	AMR	CLM	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
HG01433	hp1	a0001	c0001	t0001	g0002	AMR	CLM	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
HG01433	hp2	a0001	c0001	t0001	g0061	AMR	CLM	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
HG01496	hp1	a0001	c0001	t0001	g0001	AMR	CLM	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
HG01496	hp2	a0002	c0004	t0002	g0017	AMR	CLM	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
HG01515	hp1	a0001	c0001	t0001	g0004	EUR	IBS	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
HG01515	hp2	a0001	c0001	t0001	g0001	EUR	IBS	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
HG01516	hp1	a0002	c0004	t0002	g0017	EUR	IBS	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
HG01516	hp2	a0001	c0002	t0001	g0003	EUR	IBS	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
HG01517	hp1	a0001	c0001	t0001	g0001	EUR	IBS	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
HG01517	hp2	a0002	c0004	t0002	g0017	EUR	IBS	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
HG01884	hp1	a0001	c0003	t0002	g0022	AFR	ACB	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
HG01884	hp2	a0001	c0001	t0002	g0015	AFR	ACB	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
HG01891	hp1	a0001	c0001	t0008	g0105	AFR	ACB	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
HG01891	hp2	a0001	c0003	t0005	g0011	AFR	ACB	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
HG01934	hp1	a0001	c0001	t0001	g0001	AMR	PEL	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
HG01934	hp2	a0001	c0001	t0001	g0001	AMR	PEL	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
HG01943	hp1	a0001	c0001	t0001	g0090	AMR	PEL	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
HG01943	hp2	a0001	c0001	t0001	g0001	AMR	PEL	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
HG01978	hp1	a0001	c0001	t0001	g0002	AMR	PEL	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
HG01978	hp2	a0001	c0001	t0001	g0002	AMR	PEL	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
HG01981	hp1	a0001	c0001	t0001	g0002	AMR	PEL	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
HG01981	hp2	a0001	c0001	t0001	g0001	AMR	PEL	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
HG01993	hp1	a0001	c0001	t0001	g0001	AMR	PEL	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
HG01993	hp2	a0001	c0001	t0001	g0002	AMR	PEL	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
HG02027	hp1	a0001	c0001	t0001	g0001	EAS	KHV	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
HG02027	hp2	a0001	c0001	t0001	g0002	EAS	KHV	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
HG02040	hp1	a0001	c0001	t0001	g0001	EAS	KHV	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
HG02040	hp2	a0008	c0015	t0001	g0084	EAS	KHV	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
HG02055	hp1	a0001	c0001	t0002	g0015	AFR	ACB	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
HG02055	hp2	a0001	c0002	t0001	g0006	AFR	ACB	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
HG02056	hp1	a0001	c0001	t0001	g0001	EAS	KHV	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
HG02056	hp2	a0001	c0001	t0001	g0001	EAS	KHV	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
HG02071	hp1	a0001	c0001	t0001	g0075	EAS	KHV	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
HG02071	hp2	a0001	c0001	t0001	g0001	EAS	KHV	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
HG02129	hp1	a0001	c0001	t0020	g0072	EAS	KHV	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
HG02129	hp2	a0001	c0001	t0001	g0001	EAS	KHV	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
HG02132	hp1	a0001	c0001	t0001	g0005	EAS	KHV	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
HG02132	hp2	a0001	c0001	t0001	g0001	EAS	KHV	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
HG02135	hp1	a0001	c0001	t0001	g0036	EAS	KHV	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
HG02135	hp2	a0001	c0001	t0001	g0027	EAS	KHV	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
HG02145	hp1	a0001	c0001	t0010	g0021	AFR	ACB	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
HG02145	hp2	a0007	c0013	t0001	g0091	AFR	ACB	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
HG02148	hp1	a0001	c0001	t0001	g0001	AMR	PEL	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
HG02148	hp2	a0001	c0001	t0001	g0001	AMR	PEL	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
HG02155	hp1	a0001	c0001	t0001	g0031	EAS	CDX	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
HG02155	hp2	a0001	c0001	t0001	g0002	EAS	CDX	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
HG02165	hp1	a0001	c0001	t0001	g0001	EAS	CDX	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
HG02165	hp2	a0001	c0001	t0001	g0002	EAS	CDX	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
HG02257	hp1	a0006	c0016	t0001	g0085	AFR	ACB	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
HG02257	hp2	a0001	c0002	t0002	g0046	AFR	ACB	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
HG02258	hp1	a0001	c0001	t0006	g0016	AFR	ACB	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
HG02258	hp2	a0002	c0004	t0002	g0007	AFR	ACB	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
HG02273	hp1	a0001	c0001	t0001	g0004	AMR	PEL	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
HG02273	hp2	a0001	c0001	t0001	g0001	AMR	PEL	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
HG02280	hp1	a0001	c0001	t0006	g0016	AFR	ACB	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
HG02280	hp2	a0001	c0002	t0002	g0024	AFR	ACB	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
HG02293	hp1	a0001	c0001	t0001	g0073	AMR	PEL	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
HG02293	hp2	a0001	c0001	t0001	g0001	AMR	PEL	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
HG02300	hp1	a0001	c0001	t0001	g0001	AMR	PEL	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
HG02300	hp2	a0001	c0002	t0001	g0020	AMR	PEL	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
HG02451	hp1	a0001	c0001	t0006	g0016	AFR	ACB	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
HG02451	hp2	a0001	c0001	t0003	g0069	AFR	ACB	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
HG02572	hp1	a0002	c0005	t0003	g0013	AFR	GWD	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
HG02572	hp2	a0001	c0002	t0007	g0096	AFR	GWD	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
HG02615	hp1	a0001	c0001	t0004	g0010	AFR	GWD	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
HG02615	hp2	a0001	c0001	t0001	g0030	AFR	GWD	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
HG02622	hp1	a0001	c0001	t0004	g0010	AFR	GWD	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
HG02622	hp2	a0002	c0005	t0003	g0013	AFR	GWD	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
HG02630	hp1	a0001	c0007	t0021	g0077	AFR	GWD	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
HG02630	hp2	a0002	c0010	t0001	g0103	AFR	GWD	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
HG02647	hp1	a0001	c0003	t0013	g0059	AFR	GWD	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
HG02647	hp2	a0001	c0002	t0007	g0094	AFR	GWD	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
HG02698	hp1	a0001	c0001	t0001	g0001	SAS	PJL	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
HG02698	hp2	a0001	c0001	t0001	g0008	SAS	PJL	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
HG02717	hp1	a0001	c0003	t0005	g0011	AFR	GWD	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
HG02717	hp2	a0001	c0001	t0001	g0080	AFR	GWD	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
HG02723	hp1	a0001	c0003	t0002	g0023	AFR	GWD	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
HG02723	hp2	a0001	c0002	t0001	g0102	AFR	GWD	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
HG02738	hp1	a0001	c0001	t0001	g0034	SAS	PJL	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
HG02738	hp2	a0001	c0001	t0001	g0067	SAS	PJL	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
HG02809	hp1	a0002	c0004	t0002	g0053	AFR	GWD	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
HG02809	hp2	a0001	c0001	t0001	g0014	AFR	GWD	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
HG02818	hp1	a0001	c0003	t0002	g0047	AFR	GWD	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
HG02818	hp2	a0001	c0002	t0001	g0003	AFR	GWD	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
HG02886	hp1	a0001	c0001	t0012	g0038	AFR	GWD	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
HG02886	hp2	a0001	c0001	t0001	g0058	AFR	GWD	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
HG02895	hp1	a0001	c0002	t0001	g0006	AFR	GWD	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
HG02895	hp2	a0001	c0003	t0002	g0009	AFR	GWD	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
HG02896	hp1	a0001	c0001	t0004	g0010	AFR	GWD	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
HG02896	hp2	a0001	c0002	t0001	g0035	AFR	GWD	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
HG02897	hp1	a0001	c0002	t0001	g0006	AFR	GWD	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
HG02897	hp2	a0001	c0001	t0004	g0010	AFR	GWD	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
HG02922	hp1	a0001	c0003	t0013	g0097	AFR	ESN	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
HG02922	hp2	a0001	c0002	t0001	g0006	AFR	ESN	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
HG02965	hp1	a0001	c0002	t0001	g0006	AFR	ESN	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
HG02965	hp2	a0002	c0005	t0003	g0013	AFR	ESN	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
HG02970	hp1	a0001	c0002	t0002	g0024	AFR	ESN	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
HG02970	hp2	a0001	c0001	t0001	g0001	AFR	ESN	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
HG02976	hp1	a0001	c0001	t0003	g0057	AFR	ESN	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
HG02976	hp2	a0001	c0001	t0012	g0038	AFR	ESN	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
HG03017	hp1	a0001	c0001	t0001	g0008	SAS	PJL	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
HG03017	hp2	a0001	c0002	t0022	g0098	SAS	PJL	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
HG03041	hp1	a0001	c0002	t0014	g0048	AFR	GWD	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
HG03041	hp2	a0001	c0001	t0001	g0014	AFR	GWD	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
HG03098	hp1	a0001	c0001	t0002	g0052	AFR	MSL	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
HG03098	hp2	a0001	c0003	t0005	g0011	AFR	MSL	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
HG03130	hp1	a0001	c0001	t0015	g0045	AFR	ESN	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
HG03130	hp2	a0001	c0001	t0010	g0021	AFR	ESN	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
HG03139	hp1	a0002	c0005	t0003	g0013	AFR	ESN	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
HG03139	hp2	a0002	c0004	t0002	g0007	AFR	ESN	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
HG03195	hp1	a0001	c0002	t0002	g0050	AFR	ESN	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
HG03195	hp2	a0001	c0003	t0002	g0009	AFR	ESN	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
HG03209	hp1	a0001	c0001	t0001	g0014	AFR	MSL	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
HG03209	hp2	a0001	c0001	t0011	g0055	AFR	MSL	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
HG03225	hp1	a0001	c0003	t0002	g0009	AFR	MSL	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
HG03225	hp2	a0001	c0002	t0001	g0101	AFR	MSL	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
HG03239	hp1	a0001	c0001	t0001	g0064	SAS	PJL	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
HG03239	hp2	a0001	c0001	t0001	g0001	SAS	PJL	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
HG03453	hp1	a0002	c0005	t0016	g0039	AFR	MSL	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
HG03453	hp2	a0001	c0002	t0002	g0049	AFR	MSL	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
HG03486	hp1	a0001	c0003	t0002	g0009	AFR	MSL	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
HG03486	hp2	a0001	c0014	t0007	g0095	AFR	MSL	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
HG03490	hp1	a0001	c0001	t0001	g0004	SAS	PJL	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
HG03490	hp2	a0001	c0001	t0001	g0001	SAS	PJL	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
HG03491	hp1	a0001	c0001	t0001	g0001	SAS	PJL	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
HG03491	hp2	a0001	c0001	t0001	g0008	SAS	PJL	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
HG03492	hp1	a0001	c0001	t0001	g0008	SAS	PJL	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
HG03492	hp2	a0001	c0001	t0001	g0001	SAS	PJL	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
HG03516	hp1	a0001	c0002	t0001	g0026	AFR	ESN	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
HG03516	hp2	a0001	c0001	t0001	g0014	AFR	ESN	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
HG03540	hp1	a0001	c0001	t0002	g0041	AFR	GWD	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
HG03540	hp2	a0001	c0001	t0002	g0015	AFR	GWD	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
HG03579	hp1	a0001	c0001	t0017	g0043	AFR	MSL	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
HG03579	hp2	a0001	c0001	t0004	g0010	AFR	MSL	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
HG03654	hp1	a0001	c0001	t0001	g0008	SAS	PJL	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
HG03654	hp2	a0001	c0001	t0001	g0079	SAS	PJL	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
HG03688	hp1	a0001	c0001	t0001	g0002	SAS	STU	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
HG03688	hp2	a0001	c0001	t0001	g0004	SAS	STU	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
HG03704	hp1	a0001	c0001	t0001	g0004	SAS	PJL	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
HG03704	hp2	a0001	c0001	t0002	g0044	SAS	PJL	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
HG03710	hp1	a0001	c0001	t0001	g0008	SAS	PJL	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
HG03710	hp2	a0001	c0001	t0001	g0004	SAS	PJL	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
HG03834	hp1	a0001	c0001	t0001	g0002	SAS	BEB	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
HG03834	hp2	a0009	c0011	t0002	g0042	SAS	BEB	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
HG03927	hp1	a0001	c0001	t0001	g0004	SAS	BEB	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
HG03927	hp2	a0001	c0001	t0001	g0001	SAS	BEB	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
HG03942	hp1	a0001	c0001	t0001	g0032	SAS	BEB	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
HG03942	hp2	a0001	c0001	t0001	g0001	SAS	BEB	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
HG04199	hp1	a0001	c0001	t0001	g0004	SAS	STU	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
HG04199	hp2	a0001	c0001	t0001	g0001	SAS	STU	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
HG04204	hp1	a0001	c0001	t0001	g0034	SAS	STU	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
HG04204	hp2	a0001	c0001	t0001	g0002	SAS	STU	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
NA18522	hp1	a0002	c0010	t0002	g0054	AFR	YRI	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
NA18522	hp2	a0001	c0003	t0002	g0022	AFR	YRI	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
NA18612	hp1	a0001	c0001	t0001	g0002	EAS	CHB	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
NA18612	hp2	a0001	c0001	t0001	g0001	EAS	CHB	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
NA18747	hp1	a0001	c0001	t0001	g0074	EAS	CHB	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
NA18747	hp2	a0001	c0001	t0001	g0002	EAS	CHB	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
NA18906	hp1	a0001	c0007	t0008	g0068	AFR	YRI	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
NA18906	hp2	a0001	c0003	t0005	g0011	AFR	YRI	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
NA18942	hp1	a0001	c0001	t0001	g0086	EAS	JPT	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
NA18942	hp2	a0001	c0001	t0001	g0063	EAS	JPT	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
NA18943	hp1	a0001	c0001	t0001	g0002	EAS	JPT	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
NA18943	hp2	a0003	c0006	t0001	g0012	EAS	JPT	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
NA18944	hp1	a0001	c0001	t0001	g0036	EAS	JPT	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
NA18944	hp2	a0001	c0001	t0001	g0037	EAS	JPT	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
NA18951	hp1	a0001	c0001	t0001	g0001	EAS	JPT	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
NA18951	hp2	a0003	c0006	t0001	g0012	EAS	JPT	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
NA18953	hp1	a0001	c0001	t0001	g0078	EAS	JPT	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
NA18953	hp2	a0001	c0001	t0001	g0001	EAS	JPT	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
NA18954	hp1	a0001	c0001	t0001	g0002	EAS	JPT	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
NA18954	hp2	a0001	c0001	t0001	g0001	EAS	JPT	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
NA18957	hp1	a0001	c0001	t0001	g0001	EAS	JPT	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
NA18957	hp2	a0003	c0006	t0001	g0012	EAS	JPT	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
NA18959	hp1	a0001	c0001	t0001	g0001	EAS	JPT	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
NA18959	hp2	a0001	c0001	t0001	g0027	EAS	JPT	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
NA18962	hp1	a0001	c0001	t0001	g0001	EAS	JPT	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
NA18962	hp2	a0001	c0001	t0001	g0005	EAS	JPT	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
NA18964	hp1	a0001	c0001	t0001	g0001	EAS	JPT	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
NA18964	hp2	a0001	c0001	t0001	g0005	EAS	JPT	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
NA18971	hp1	a0001	c0001	t0001	g0001	EAS	JPT	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
NA18971	hp2	a0001	c0001	t0001	g0088	EAS	JPT	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
NA18975	hp1	a0001	c0001	t0018	g0056	EAS	JPT	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
NA18975	hp2	a0001	c0001	t0001	g0002	EAS	JPT	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
NA18978	hp1	a0001	c0001	t0001	g0028	EAS	JPT	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
NA18978	hp2	a0001	c0001	t0001	g0001	EAS	JPT	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
NA18987	hp1	a0001	c0001	t0001	g0005	EAS	JPT	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
NA18987	hp2	a0001	c0001	t0001	g0001	EAS	JPT	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
NA18990	hp1	a0001	c0001	t0001	g0002	EAS	JPT	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
NA18990	hp2	a0001	c0001	t0001	g0076	EAS	JPT	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
NA18995	hp1	a0001	c0001	t0001	g0037	EAS	JPT	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
NA18995	hp2	a0001	c0001	t0001	g0001	EAS	JPT	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
NA19000	hp1	a0001	c0001	t0001	g0001	EAS	JPT	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
NA19000	hp2	a0001	c0001	t0001	g0002	EAS	JPT	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
NA19001	hp1	a0001	c0001	t0001	g0001	EAS	JPT	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
NA19001	hp2	a0001	c0001	t0001	g0089	EAS	JPT	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
NA19004	hp1	a0001	c0001	t0001	g0005	EAS	JPT	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
NA19004	hp2	a0001	c0001	t0001	g0001	EAS	JPT	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
NA19005	hp1	a0001	c0001	t0001	g0001	EAS	JPT	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
NA19005	hp2	a0001	c0001	t0001	g0002	EAS	JPT	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
NA19011	hp1	a0001	c0001	t0001	g0001	EAS	JPT	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
NA19011	hp2	a0001	c0001	t0001	g0005	EAS	JPT	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
NA19012	hp1	a0001	c0001	t0001	g0001	EAS	JPT	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
NA19012	hp2	a0001	c0001	t0001	g0005	EAS	JPT	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
NA19030	hp1	a0005	c0009	t0001	g0081	AFR	LWK	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
NA19030	hp2	a0001	c0002	t0001	g0035	AFR	LWK	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
NA19043	hp1	a0001	c0002	t0001	g0006	AFR	LWK	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
NA19043	hp2	a0001	c0002	t0001	g0003	AFR	LWK	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
NA19055	hp1	a0001	c0001	t0001	g0106	EAS	JPT	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
NA19055	hp2	a0001	c0001	t0001	g0002	EAS	JPT	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
NA19065	hp1	a0001	c0001	t0001	g0031	EAS	JPT	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
NA19065	hp2	a0001	c0001	t0001	g0028	EAS	JPT	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
NA19079	hp1	a0001	c0001	t0001	g0001	EAS	JPT	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
NA19079	hp2	a0001	c0001	t0001	g0001	EAS	JPT	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
NA19090	hp1	a0001	c0001	t0001	g0001	EAS	JPT	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
NA19090	hp2	a0001	c0001	t0001	g0092	EAS	JPT	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
NA19240	hp1	a0002	c0004	t0002	g0007	AFR	YRI	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
NA19240	hp2	a0001	c0002	t0001	g0006	AFR	YRI	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
NA20129	hp1	a0002	c0004	t0002	g0007	AFR	ASW	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
NA20129	hp2	a0001	c0002	t0001	g0026	AFR	ASW	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
NA20752	hp1	a0001	c0001	t0001	g0002	EUR	TSI	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
NA20752	hp2	a0001	c0001	t0001	g0001	EUR	TSI	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
NA20805	hp1	a0001	c0001	t0001	g0002	EUR	TSI	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
NA20805	hp2	a0001	c0001	t0001	g0001	EUR	TSI	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
NA20905	hp1	a0001	c0001	t0001	g0070	SAS	GIH	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
NA20905	hp2	a0001	c0001	t0001	g0001	SAS	GIH	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
HG02109	hp1	a0001	c0001	t0001	g0104	AFR	ACB	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
HG02109	hp2	a0005	c0009	t0001	g0082	AFR	ACB	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
HG02559	hp1	a0001	c0007	t0011	g0051	AFR	ACB	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
HG02559	hp2	a0001	c0003	t0002	g0009	AFR	ACB	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
HG03471	hp1	a0002	c0004	t0002	g0007	AFR	MSL	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
HG03471	hp2	a0001	c0001	t0001	g0030	AFR	MSL	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
HG06807	hp1	a0002	c0004	t0002	g0007	AFR	USA	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
HG06807	hp2	a0001	c0001	t0001	g0066	AFR	USA	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
NA20300	hp1	a0001	c0002	t0001	g0003	AFR	USA	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
NA20300	hp2	a0001	c0001	t0001	g0001	AFR	USA	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
NA21309	hp1	a0001	c0002	t0002	g0040	AFR	LWK	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
NA21309	hp2	a0001	c0001	t0001	g0083	AFR	LWK	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
homoSapiens_chm13v2	hp1	a0001	c0001	t0001	g0019	REF	REF	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895
homoSapiens_grch38	hp1	a0001	c0001	t0001	g0093	REF	REF	CTSE_chr1_206004264_206028895	CTSE	chr1	206004264	206028895

chr:pos	ref	alt	# # of ahapid:amino-acid(protein) level	ahapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	hgvs_p	genename	geneid	featuretype	featureid	transcript_biotype	rank	cdna cdna pos length	cds cds pos length	aa aa pos length	chr	pos
chr1:206010199	G G	A A	1	a0004 a0004	3	HG00733.hp1 HG00738.hp2 HG01074.hp2 HG00733.hp1 HG00738.hp2 HG01074.hp2	missense_variant	MODERATE	c.1175C>T c.1175C>T	p.Ala392Val p.Ala392Val	CTSE	ENSG00000196188.12	transcript	ENST00000358184.7	protein_coding	9/9	1279/2214	1175/1191	392/396	chr1	206010199
chr1:206012315	G G	T T	1	a0005 a0005	2	HG02109.hp2 NA19030.hp1 HG02109.hp2 NA19030.hp1	missense_variant	MODERATE	c.1019C>A c.1019C>A	p.Thr340Asn p.Thr340Asn	CTSE	ENSG00000196188.12	transcript	ENST00000358184.7	protein_coding	8/9	1123/2214	1019/1191	340/396	chr1	206012315
chr1:206012318	T T	C C	1	a0007 a0007	1	HG02145.hp2 HG02145.hp2	missense_variant	MODERATE	c.1016A>G c.1016A>G	p.Tyr339Cys p.Tyr339Cys	CTSE	ENSG00000196188.12	transcript	ENST00000358184.7	protein_coding	8/9	1120/2214	1016/1191	339/396	chr1	206012318
chr1:206012512	C C	G G	1	a0006 a0006	1	HG02257.hp1 HG02257.hp1	missense_variant	MODERATE	c.923G>C c.923G>C	p.Gly308Ala p.Gly308Ala	CTSE	ENSG00000196188.12	transcript	ENST00000358184.7	protein_coding	7/9	1027/2214	923/1191	308/396	chr1	206012512
chr1:206012533	A A	G G	1	a0008 a0008	1	HG02040.hp2 HG02040.hp2	missense_variant	MODERATE	c.902T>C c.902T>C	p.Ile301Thr p.Ile301Thr	CTSE	ENSG00000196188.12	transcript	ENST00000358184.7	protein_coding	7/9	1006/2214	902/1191	301/396	chr1	206012533
chr1:206016109	C C	T T	1	a0003 a0003	4	HG00621.hp1 NA18943.hp2 NA18951.hp2 others(1): Show HG00621.hp1 NA18943.hp2 NA18951.hp2 NA18957.hp2	missense_variant	MODERATE	c.484G>A c.484G>A	p.Gly162Ser p.Gly162Ser	CTSE	ENSG00000196188.12	transcript	ENST00000358184.7	protein_coding	5/9	588/2214	484/1191	162/396	chr1	206016109
chr1:206021075	C C	T T	1	a0009 a0009	1	HG03834.hp2 HG03834.hp2	missense_variant	MODERATE	c.436G>A c.436G>A	p.Gly146Arg p.Gly146Arg	CTSE	ENSG00000196188.12	transcript	ENST00000358184.7	protein_coding	4/9	540/2214	436/1191	146/396	chr1	206021075
chr1:206022249	T T	C C	1	a0002 a0002	19	HG01069.hp1 HG01071.hp2 HG01496.hp2 others(16): Show HG01069.hp1 HG01071.hp2 HG01496.hp2 HG01516.hp1 HG01517.hp2 HG02258.hp2 HG02572.hp1 HG02622.hp2 HG02630.hp2 HG02809.hp1 HG02965.hp2 HG03139.hp1 HG03139.hp2 HG03453.hp1 HG03471.hp1 HG06807.hp1 NA18522.hp1 NA19240.hp1 NA20129.hp1	missense_variant	MODERATE	c.244A>G c.244A>G	p.Ile82Val p.Ile82Val	CTSE	ENSG00000196188.12	transcript	ENST00000358184.7	protein_coding	3/9	348/2214	244/1191	82/396	chr1	206022249

chr:pos	ref	alt	# # of chapid	chapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	hgvs_p	genename	geneid	featuretype	featureid	transcript_biotype	rank	cdna cdna pos length	cds cds pos length	aa aa pos length	chr	pos
chr1:206012317	G G	A A	1	a0001c0012 a0001c0012	1	HG00642.hp1 HG00642.hp1	synonymous_variant	LOW	c.1017C>T c.1017C>T	p.Tyr339Tyr p.Tyr339Tyr	CTSE	ENSG00000196188.12	transcript	ENST00000358184.7	protein_coding	8/9	1121/2214	1017/1191	339/396	chr1	206012317
chr1:206012350	G G	A A	1	a0001c0014 a0001c0014	1	HG03486.hp2 HG03486.hp2	synonymous_variant	LOW	c.984C>T c.984C>T	p.Asn328Asn p.Asn328Asn	CTSE	ENSG00000196188.12	transcript	ENST00000358184.7	protein_coding	8/9	1088/2214	984/1191	328/396	chr1	206012350
chr1:206012565	A A	G G	6	a0001c0002 a0001c0007 a0001c0012 others(3): Show a0001c0002 a0001c0007 a0001c0012 a0001c0014 a0002c0004 a0002c0010	59	HG00140.hp2 HG00423.hp2 HG00642.hp1 others(56): Show HG00140.hp2 HG00423.hp2 HG00642.hp1 HG01069.hp1 HG01070.hp1 HG01071.hp1 HG01071.hp2 HG01099.hp2 HG01192.hp2 HG01257.hp2 HG01258.hp1 HG01261.hp1 HG01346.hp1 HG01358.hp1 HG01361.hp1 HG01496.hp2 HG01516.hp1 HG01516.hp2 HG01517.hp2 HG02055.hp2 HG02257.hp2 HG02258.hp2 HG02280.hp2 HG02300.hp2 HG02559.hp1 HG02572.hp2 HG02630.hp1 HG02630.hp2 HG02647.hp2 HG02723.hp2 HG02809.hp1 HG02818.hp2 HG02895.hp1 HG02896.hp2 HG02897.hp1 HG02922.hp2 HG02965.hp1 HG02970.hp1 HG03017.hp2 HG03041.hp1 HG03139.hp2 HG03195.hp1 HG03225.hp2 HG03453.hp2 HG03471.hp1 HG03486.hp2 HG03516.hp1 HG06807.hp1 NA18522.hp1 NA18906.hp1 NA19030.hp2 NA19043.hp1 NA19043.hp2 NA19240.hp1 NA19240.hp2 NA20129.hp1 NA20129.hp2 NA20300.hp1 NA21309.hp1	synonymous_variant	LOW	c.870T>C c.870T>C	p.Pro290Pro p.Pro290Pro	CTSE	ENSG00000196188.12	transcript	ENST00000358184.7	protein_coding	7/9	974/2214	870/1191	290/396	chr1	206012565
chr1:206013786	C C	T T	1	a0002c0010 a0002c0010	2	HG02630.hp2 NA18522.hp1 HG02630.hp2 NA18522.hp1	synonymous_variant	LOW	c.771G>A c.771G>A	p.Gln257Gln p.Gln257Gln	CTSE	ENSG00000196188.12	transcript	ENST00000358184.7	protein_coding	6/9	875/2214	771/1191	257/396	chr1	206013786
chr1:206013858	A A	G G	6	a0001c0002 a0001c0012 a0002c0004 others(3): Show a0001c0002 a0001c0012 a0002c0004 a0002c0005 a0002c0010 a0007c0013	61	HG00140.hp2 HG00423.hp2 HG00642.hp1 others(58): Show HG00140.hp2 HG00423.hp2 HG00642.hp1 HG01069.hp1 HG01070.hp1 HG01071.hp1 HG01071.hp2 HG01099.hp2 HG01192.hp2 HG01257.hp2 HG01258.hp1 HG01261.hp1 HG01346.hp1 HG01358.hp1 HG01361.hp1 HG01496.hp2 HG01516.hp1 HG01516.hp2 HG01517.hp2 HG02055.hp2 HG02145.hp2 HG02257.hp2 HG02258.hp2 HG02280.hp2 HG02300.hp2 HG02572.hp1 HG02572.hp2 HG02622.hp2 HG02630.hp2 HG02647.hp2 HG02723.hp2 HG02809.hp1 HG02818.hp2 HG02895.hp1 HG02896.hp2 HG02897.hp1 HG02922.hp2 HG02965.hp1 HG02965.hp2 HG02970.hp1 HG03017.hp2 HG03041.hp1 HG03139.hp1 HG03139.hp2 HG03195.hp1 HG03225.hp2 HG03453.hp1 HG03453.hp2 HG03471.hp1 HG03516.hp1 HG06807.hp1 NA18522.hp1 NA19030.hp2 NA19043.hp1 NA19043.hp2 NA19240.hp1 NA19240.hp2 NA20129.hp1 NA20129.hp2 NA20300.hp1 NA21309.hp1	synonymous_variant	LOW	c.699T>C c.699T>C	p.Phe233Phe p.Phe233Phe	CTSE	ENSG00000196188.12	transcript	ENST00000358184.7	protein_coding	6/9	803/2214	699/1191	233/396	chr1	206013858
chr1:206021061	G G	A A	1	a0001c0003 a0001c0003	16	HG01243.hp2 HG01884.hp1 HG01891.hp2 others(13): Show HG01243.hp2 HG01884.hp1 HG01891.hp2 HG02559.hp2 HG02647.hp1 HG02717.hp1 HG02723.hp1 HG02818.hp1 HG02895.hp2 HG02922.hp1 HG03098.hp2 HG03195.hp2 HG03225.hp1 HG03486.hp1 NA18522.hp2 NA18906.hp2	synonymous_variant	LOW	c.450C>T c.450C>T	p.Ala150Ala p.Ala150Ala	CTSE	ENSG00000196188.12	transcript	ENST00000358184.7	protein_coding	4/9	554/2214	450/1191	150/396	chr1	206021061

chr:pos	ref	alt	# # of thapid:transcript level	thapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	chr	pos
chr1:206009290	A A	G G	1	a0001c0001t0019 a0001c0001t0019	1	HG00738.hp1 HG00738.hp1	3_prime_UTR_variant	MODIFIER	c.893T>C c.893T>C	CTSE	ENSG00000196188.12	transcript	ENST00000358184.7	protein_coding	9/9	893	chr1	206009290
chr1:206009361	C C	T T	4	a0001c0001t0003 a0001c0001t0017 a0002c0005t0003 others(1): Show a0001c0001t0003 a0001c0001t0017 a0002c0005t0003 a0002c0005t0016	8	HG02451.hp2 HG02572.hp1 HG02622.hp2 others(5): Show HG02451.hp2 HG02572.hp1 HG02622.hp2 HG02965.hp2 HG02976.hp1 HG03139.hp1 HG03453.hp1 HG03579.hp1	3_prime_UTR_variant	MODIFIER	c.822G>A c.822G>A	CTSE	ENSG00000196188.12	transcript	ENST00000358184.7	protein_coding	9/9	822	chr1	206009361
chr1:206009679	G G	C C	1	a0001c0001t0020 a0001c0001t0020	1	HG02129.hp1 HG02129.hp1	3_prime_UTR_variant	MODIFIER	c.504C>G c.504C>G	CTSE	ENSG00000196188.12	transcript	ENST00000358184.7	protein_coding	9/9	504	chr1	206009679
chr1:206009743	A A	T T	2	a0001c0001t0004 a0002c0004t0009 a0001c0001t0004 a0002c0004t0009	7	HG01069.hp1 HG01071.hp2 HG02615.hp1 others(4): Show HG01069.hp1 HG01071.hp2 HG02615.hp1 HG02622.hp1 HG02896.hp1 HG02897.hp2 HG03579.hp2	3_prime_UTR_variant	MODIFIER	c.440T>A c.440T>A	CTSE	ENSG00000196188.12	transcript	ENST00000358184.7	protein_coding	9/9	440	chr1	206009743
chr1:206009798	G G	A A	1	a0001c0001t0017 a0001c0001t0017	1	HG03579.hp1 HG03579.hp1	3_prime_UTR_variant	MODIFIER	c.385C>T c.385C>T	CTSE	ENSG00000196188.12	transcript	ENST00000358184.7	protein_coding	9/9	385	chr1	206009798
chr1:206009802	G G	A A	2	a0001c0001t0006 a0001c0001t0015 a0001c0001t0006 a0001c0001t0015	4	HG02258.hp1 HG02280.hp1 HG02451.hp1 others(1): Show HG02258.hp1 HG02280.hp1 HG02451.hp1 HG03130.hp1	3_prime_UTR_variant	MODIFIER	c.381C>T c.381C>T	CTSE	ENSG00000196188.12	transcript	ENST00000358184.7	protein_coding	9/9	381	chr1	206009802
chr1:206009861	G G	T T	4	a0001c0001t0003 a0001c0001t0017 a0002c0005t0003 others(1): Show a0001c0001t0003 a0001c0001t0017 a0002c0005t0003 a0002c0005t0016	8	HG02451.hp2 HG02572.hp1 HG02622.hp2 others(5): Show HG02451.hp2 HG02572.hp1 HG02622.hp2 HG02965.hp2 HG02976.hp1 HG03139.hp1 HG03453.hp1 HG03579.hp1	3_prime_UTR_variant	MODIFIER	c.322C>A c.322C>A	CTSE	ENSG00000196188.12	transcript	ENST00000358184.7	protein_coding	9/9	322	chr1	206009861
chr1:206009921	C C	A A	8	a0001c0001t0003 a0001c0001t0006 a0001c0001t0010 others(5): Show a0001c0001t0003 a0001c0001t0006 a0001c0001t0010 a0001c0001t0012 a0001c0001t0017 a0001c0007t0021 a0002c0005t0003 a0002c0005t0016	16	HG02145.hp1 HG02258.hp1 HG02280.hp1 others(13): Show HG02145.hp1 HG02258.hp1 HG02280.hp1 HG02451.hp1 HG02451.hp2 HG02572.hp1 HG02622.hp2 HG02630.hp1 HG02886.hp1 HG02965.hp2 HG02976.hp1 HG02976.hp2 HG03130.hp2 HG03139.hp1 HG03453.hp1 HG03579.hp1	3_prime_UTR_variant	MODIFIER	c.262G>T c.262G>T	CTSE	ENSG00000196188.12	transcript	ENST00000358184.7	protein_coding	9/9	262	chr1	206009921
chr1:206009952	G G	A A	1	a0001c0002t0022 a0001c0002t0022	1	HG03017.hp2 HG03017.hp2	3_prime_UTR_variant	MODIFIER	c.231C>T c.231C>T	CTSE	ENSG00000196188.12	transcript	ENST00000358184.7	protein_coding	9/9	231	chr1	206009952
chr1:206009983	G G	A A	1	a0001c0001t0012 a0001c0001t0012	2	HG02886.hp1 HG02976.hp2 HG02886.hp1 HG02976.hp2	3_prime_UTR_variant	MODIFIER	c.200C>T c.200C>T	CTSE	ENSG00000196188.12	transcript	ENST00000358184.7	protein_coding	9/9	200	chr1	206009983
chr1:206010031	G G	A A	1	a0001c0001t0018 a0001c0001t0018	1	NA18975.hp1 NA18975.hp1	3_prime_UTR_variant	MODIFIER	c.152C>T c.152C>T	CTSE	ENSG00000196188.12	transcript	ENST00000358184.7	protein_coding	9/9	152	chr1	206010031
chr1:206010035	T T	G G	4	a0001c0001t0008 a0001c0001t0011 a0001c0007t0008 others(1): Show a0001c0001t0008 a0001c0001t0011 a0001c0007t0008 a0001c0007t0011	5	HG01109.hp1 HG01891.hp1 HG02559.hp1 others(2): Show HG01109.hp1 HG01891.hp1 HG02559.hp1 HG03209.hp2 NA18906.hp1	3_prime_UTR_variant	MODIFIER	c.148A>C c.148A>C	CTSE	ENSG00000196188.12	transcript	ENST00000358184.7	protein_coding	9/9	148	chr1	206010035
chr1:206010036	C C	T T	3	a0001c0002t0007 a0001c0002t0014 a0001c0014t0007 a0001c0002t0007 a0001c0002t0014 a0001c0014t0007	4	HG02572.hp2 HG02647.hp2 HG03041.hp1 others(1): Show HG02572.hp2 HG02647.hp2 HG03041.hp1 HG03486.hp2	3_prime_UTR_variant	MODIFIER	c.147G>A c.147G>A	CTSE	ENSG00000196188.12	transcript	ENST00000358184.7	protein_coding	9/9	147	chr1	206010036
chr1:206010039	A A	T T	3	a0001c0002t0007 a0001c0002t0014 a0001c0014t0007 a0001c0002t0007 a0001c0002t0014 a0001c0014t0007	4	HG02572.hp2 HG02647.hp2 HG03041.hp1 others(1): Show HG02572.hp2 HG02647.hp2 HG03041.hp1 HG03486.hp2	3_prime_UTR_variant	MODIFIER	c.144T>A c.144T>A	CTSE	ENSG00000196188.12	transcript	ENST00000358184.7	protein_coding	9/9	144	chr1	206010039
chr1:206010175	G G	A A	2	a0001c0003t0005 a0001c0003t0013 a0001c0003t0005 a0001c0003t0013	6	HG01891.hp2 HG02647.hp1 HG02717.hp1 others(3): Show HG01891.hp2 HG02647.hp1 HG02717.hp1 HG02922.hp1 HG03098.hp2 NA18906.hp2	3_prime_UTR_variant	MODIFIER	c.8C>T c.8C>T	CTSE	ENSG00000196188.12	transcript	ENST00000358184.7	protein_coding	9/9	8	chr1	206010175
chr1:206023800	C C	T T	17	a0001c0001t0002 a0001c0001t0006 a0001c0001t0010 others(14): Show a0001c0001t0002 a0001c0001t0006 a0001c0001t0010 a0001c0001t0011 a0001c0001t0015 a0001c0001t0017 a0001c0001t0018 a0001c0002t0002 a0001c0002t0014 a0001c0003t0002 a0001c0003t0005 a0001c0007t0011 a0002c0004t0002 a0002c0004t0009 a0002c0005t0016 a0002c0010t0002 a0009c0011t0002	52	HG01069.hp1 HG01071.hp2 HG01243.hp2 others(49): Show HG01069.hp1 HG01071.hp2 HG01243.hp2 HG01496.hp2 HG01516.hp1 HG01517.hp2 HG01884.hp1 HG01884.hp2 HG01891.hp2 HG02055.hp1 HG02145.hp1 HG02257.hp2 HG02258.hp1 HG02258.hp2 HG02280.hp1 HG02280.hp2 HG02451.hp1 HG02559.hp1 HG02559.hp2 HG02717.hp1 HG02723.hp1 HG02809.hp1 HG02818.hp1 HG02895.hp2 HG02970.hp1 HG03041.hp1 HG03098.hp1 HG03098.hp2 HG03130.hp1 HG03130.hp2 HG03139.hp2 HG03195.hp1 HG03195.hp2 HG03209.hp2 HG03225.hp1 HG03453.hp1 HG03453.hp2 HG03471.hp1 HG03486.hp1 HG03540.hp1 HG03540.hp2 HG03579.hp1 HG03704.hp2 HG03834.hp2 HG06807.hp1 NA18522.hp1 NA18522.hp2 NA18906.hp2 NA18975.hp1 NA19240.hp1 NA20129.hp1 NA21309.hp1	5_prime_UTR_variant	MODIFIER	c.-9G>A c.-9G>A	CTSE	ENSG00000196188.12	transcript	ENST00000358184.7	protein_coding	1/9	9	chr1	206023800

chr:pos	ref	alt	# # of ghapid:genebody level	ghapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	genename	geneid	featuretype	featureid	genebody_biotype	rank	chr	pos
chr1:206010360	A A	G G	1	a0001c0001t0006g0016 a0001c0001t0006g0016	3	HG02258.hp1 HG02280.hp1 HG02451.hp1 HG02258.hp1 HG02280.hp1 HG02451.hp1	intron_variant	MODIFIER	c.1027-13T>C c.1027-13T>C	CTSE	ENSG00000196188.12	transcript	ENST00000358184.7	protein_coding	8/8	chr1	206010360
chr1:206010482	G G	A A	1	a0001c0001t0006g0016 a0001c0001t0006g0016	3	HG02258.hp1 HG02280.hp1 HG02451.hp1 HG02258.hp1 HG02280.hp1 HG02451.hp1	intron_variant	MODIFIER	c.1027-135C>T c.1027-135C>T	CTSE	ENSG00000196188.12	transcript	ENST00000358184.7	protein_coding	8/8	chr1	206010482
chr1:206010525	C C	T T	1	a0001c0001t0012g0038 a0001c0001t0012g0038	2	HG02886.hp1 HG02976.hp2 HG02886.hp1 HG02976.hp2	intron_variant	MODIFIER	c.1027-178G>A c.1027-178G>A	CTSE	ENSG00000196188.12	transcript	ENST00000358184.7	protein_coding	8/8	chr1	206010525
chr1:206010561	T T	C C	1	a0001c0001t0006g0016 a0001c0001t0006g0016	3	HG02258.hp1 HG02280.hp1 HG02451.hp1 HG02258.hp1 HG02280.hp1 HG02451.hp1	intron_variant	MODIFIER	c.1027-214A>G c.1027-214A>G	CTSE	ENSG00000196188.12	transcript	ENST00000358184.7	protein_coding	8/8	chr1	206010561
chr1:206010655	C C	T T	1	a0001c0001t0006g0016 a0001c0001t0006g0016	3	HG02258.hp1 HG02280.hp1 HG02451.hp1 HG02258.hp1 HG02280.hp1 HG02451.hp1	intron_variant	MODIFIER	c.1027-308G>A c.1027-308G>A	CTSE	ENSG00000196188.12	transcript	ENST00000358184.7	protein_coding	8/8	chr1	206010655
chr1:206010773	G G	C C	1	a0001c0001t0006g0016 a0001c0001t0006g0016	3	HG02258.hp1 HG02280.hp1 HG02451.hp1 HG02258.hp1 HG02280.hp1 HG02451.hp1	intron_variant	MODIFIER	c.1027-426C>G c.1027-426C>G	CTSE	ENSG00000196188.12	transcript	ENST00000358184.7	protein_coding	8/8	chr1	206010773
chr1:206010846	G G	T T	3	a0001c0002t0007g0094 a0001c0002t0007g0096 a0001c0002t0014g0048 a0001c0002t0007g0094 a0001c0002t0007g0096 a0001c0002t0014g0048	3	HG02572.hp2 HG02647.hp2 HG03041.hp1 HG02572.hp2 HG02647.hp2 HG03041.hp1	intron_variant	MODIFIER	c.1027-499C>A c.1027-499C>A	CTSE	ENSG00000196188.12	transcript	ENST00000358184.7	protein_coding	8/8	chr1	206010846
chr1:206010919	G G	A A	2	a0001c0001t0006g0016 a0001c0001t0018g0056 a0001c0001t0006g0016 a0001c0001t0018g0056	4	HG02258.hp1 HG02280.hp1 HG02451.hp1 others(1): Show HG02258.hp1 HG02280.hp1 HG02451.hp1 NA18975.hp1	intron_variant	MODIFIER	c.1027-572C>T c.1027-572C>T	CTSE	ENSG00000196188.12	transcript	ENST00000358184.7	protein_coding	8/8	chr1	206010919
chr1:206011111	T T	A A	1	a0001c0001t0015g0045 a0001c0001t0015g0045	1	HG03130.hp1 HG03130.hp1	intron_variant	MODIFIER	c.1027-764A>T c.1027-764A>T	CTSE	ENSG00000196188.12	transcript	ENST00000358184.7	protein_coding	8/8	chr1	206011111
chr1:206011111	T T	G G	10	a0001c0001t0003g0057 a0001c0001t0003g0069 a0001c0001t0006g0016 others(7): Show a0001c0001t0003g0057 a0001c0001t0003g0069 a0001c0001t0006g0016 a0001c0001t0010g0021 a0001c0001t0012g0038 a0001c0001t0017g0043 a0001c0001t0018g0056 a0001c0007t0021g0077 a0002c0005t0003g0013 a0002c0005t0016g0039	17	HG02145.hp1 HG02258.hp1 HG02280.hp1 others(14): Show HG02145.hp1 HG02258.hp1 HG02280.hp1 HG02451.hp1 HG02451.hp2 HG02572.hp1 HG02622.hp2 HG02630.hp1 HG02886.hp1 HG02965.hp2 HG02976.hp1 HG02976.hp2 HG03130.hp2 HG03139.hp1 HG03453.hp1 HG03579.hp1 NA18975.hp1	intron_variant	MODIFIER	c.1027-764A>C c.1027-764A>C	CTSE	ENSG00000196188.12	transcript	ENST00000358184.7	protein_coding	8/8	chr1	206011111
chr1:206011147	G G	A A	1	a0007c0013t0001g0091 a0007c0013t0001g0091	1	HG02145.hp2 HG02145.hp2	intron_variant	MODIFIER	c.1027-800C>T c.1027-800C>T	CTSE	ENSG00000196188.12	transcript	ENST00000358184.7	protein_coding	8/8	chr1	206011147
chr1:206011161	G G	A A	1	a0001c0001t0006g0016 a0001c0001t0006g0016	3	HG02258.hp1 HG02280.hp1 HG02451.hp1 HG02258.hp1 HG02280.hp1 HG02451.hp1	intron_variant	MODIFIER	c.1027-814C>T c.1027-814C>T	CTSE	ENSG00000196188.12	transcript	ENST00000358184.7	protein_coding	8/8	chr1	206011161
chr1:206011270	C C	T T	1	a0001c0001t0002g0044 a0001c0001t0002g0044	1	HG03704.hp2 HG03704.hp2	intron_variant	MODIFIER	c.1027-923G>A c.1027-923G>A	CTSE	ENSG00000196188.12	transcript	ENST00000358184.7	protein_coding	8/8	chr1	206011270
chr1:206011271	G G	A A	1	a0001c0001t0001g0083 a0001c0001t0001g0083	1	NA21309.hp2 NA21309.hp2	intron_variant	MODIFIER	c.1027-924C>T c.1027-924C>T	CTSE	ENSG00000196188.12	transcript	ENST00000358184.7	protein_coding	8/8	chr1	206011271
chr1:206011327	G G	A A	1	a0001c0001t0003g0069 a0001c0001t0003g0069	1	HG02451.hp2 HG02451.hp2	intron_variant	MODIFIER	c.1027-980C>T c.1027-980C>T	CTSE	ENSG00000196188.12	transcript	ENST00000358184.7	protein_coding	8/8	chr1	206011327
chr1:206011373	C C	T T	1	a0007c0013t0001g0091 a0007c0013t0001g0091	1	HG02145.hp2 HG02145.hp2	intron_variant	MODIFIER	c.1026+935G>A c.1026+935G>A	CTSE	ENSG00000196188.12	transcript	ENST00000358184.7	protein_coding	8/8	chr1	206011373
chr1:206011452	C C	G G	1	a0001c0001t0001g0086 a0001c0001t0001g0086	1	NA18942.hp1 NA18942.hp1	intron_variant	MODIFIER	c.1026+856G>C c.1026+856G>C	CTSE	ENSG00000196188.12	transcript	ENST00000358184.7	protein_coding	8/8	chr1	206011452
chr1:206011609	G G	A A	1	a0001c0001t0012g0038 a0001c0001t0012g0038	2	HG02886.hp1 HG02976.hp2 HG02886.hp1 HG02976.hp2	intron_variant	MODIFIER	c.1026+699C>T c.1026+699C>T	CTSE	ENSG00000196188.12	transcript	ENST00000358184.7	protein_coding	8/8	chr1	206011609
chr1:206011717	C C	T T	4	a0001c0001t0003g0057 a0001c0001t0017g0043 a0002c0005t0003g0013 others(1): Show a0001c0001t0003g0057 a0001c0001t0017g0043 a0002c0005t0003g0013 a0002c0005t0016g0039	7	HG02572.hp1 HG02622.hp2 HG02965.hp2 others(4): Show HG02572.hp1 HG02622.hp2 HG02965.hp2 HG02976.hp1 HG03139.hp1 HG03453.hp1 HG03579.hp1	intron_variant	MODIFIER	c.1026+591G>A c.1026+591G>A	CTSE	ENSG00000196188.12	transcript	ENST00000358184.7	protein_coding	8/8	chr1	206011717
chr1:206011748	A A	G G	16	a0001c0002t0001g0003 a0001c0002t0001g0020 a0001c0002t0001g0033 others(13): Show a0001c0002t0001g0003 a0001c0002t0001g0020 a0001c0002t0001g0033 a0001c0002t0001g0100 a0001c0002t0001g0101 a0001c0002t0001g0102 a0001c0002t0002g0040 a0001c0002t0002g0050 a0001c0002t0022g0098 a0001c0003t0002g0022 a0001c0012t0001g0099 a0002c0004t0002g0007 a0002c0004t0002g0017 a0002c0004t0002g0053 a0002c0010t0001g0103 a0002c0010t0002g0054	37	HG00140.hp2 HG00423.hp2 HG00642.hp1 others(34): Show HG00140.hp2 HG00423.hp2 HG00642.hp1 HG01070.hp1 HG01071.hp1 HG01099.hp2 HG01192.hp2 HG01257.hp2 HG01258.hp1 HG01261.hp1 HG01346.hp1 HG01358.hp1 HG01361.hp1 HG01496.hp2 HG01516.hp1 HG01516.hp2 HG01517.hp2 HG01884.hp1 HG02258.hp2 HG02300.hp2 HG02630.hp2 HG02723.hp2 HG02809.hp1 HG02818.hp2 HG03017.hp2 HG03139.hp2 HG03195.hp1 HG03225.hp2 HG03471.hp1 HG06807.hp1 NA18522.hp1 NA18522.hp2 NA19043.hp2 NA19240.hp1 NA20129.hp1 NA20300.hp1 NA21309.hp1	intron_variant	MODIFIER	c.1026+560T>C c.1026+560T>C	CTSE	ENSG00000196188.12	transcript	ENST00000358184.7	protein_coding	8/8	chr1	206011748
chr1:206011786	G G	A A	9	a0001c0001t0002g0041 a0001c0001t0003g0057 a0001c0001t0003g0069 others(6): Show a0001c0001t0002g0041 a0001c0001t0003g0057 a0001c0001t0003g0069 a0001c0001t0006g0016 a0001c0001t0010g0021 a0001c0001t0012g0038 a0001c0001t0017g0043 a0002c0005t0003g0013 a0002c0005t0016g0039	16	HG02145.hp1 HG02258.hp1 HG02280.hp1 others(13): Show HG02145.hp1 HG02258.hp1 HG02280.hp1 HG02451.hp1 HG02451.hp2 HG02572.hp1 HG02622.hp2 HG02886.hp1 HG02965.hp2 HG02976.hp1 HG02976.hp2 HG03130.hp2 HG03139.hp1 HG03453.hp1 HG03540.hp1 HG03579.hp1	intron_variant	MODIFIER	c.1026+522C>T c.1026+522C>T	CTSE	ENSG00000196188.12	transcript	ENST00000358184.7	protein_coding	8/8	chr1	206011786
chr1:206011793	C C	T T	2	a0001c0001t0002g0052 a0001c0001t0012g0038 a0001c0001t0002g0052 a0001c0001t0012g0038	3	HG02886.hp1 HG02976.hp2 HG03098.hp1 HG02886.hp1 HG02976.hp2 HG03098.hp1	intron_variant	MODIFIER	c.1026+515G>A c.1026+515G>A	CTSE	ENSG00000196188.12	transcript	ENST00000358184.7	protein_coding	8/8	chr1	206011793
chr1:206011993	C C	T T	1	a0001c0007t0011g0051 a0001c0007t0011g0051	1	HG02559.hp1 HG02559.hp1	intron_variant	MODIFIER	c.1026+315G>A c.1026+315G>A	CTSE	ENSG00000196188.12	transcript	ENST00000358184.7	protein_coding	8/8	chr1	206011993
chr1:206012254	G G	C C	3	a0001c0001t0001g0080 a0001c0002t0002g0049 a0001c0003t0002g0009 a0001c0001t0001g0080 a0001c0002t0002g0049 a0001c0003t0002g0009	7	HG02559.hp2 HG02717.hp2 HG02895.hp2 others(4): Show HG02559.hp2 HG02717.hp2 HG02895.hp2 HG03195.hp2 HG03225.hp1 HG03453.hp2 HG03486.hp1	intron_variant	MODIFIER	c.1026+54C>G c.1026+54C>G	CTSE	ENSG00000196188.12	transcript	ENST00000358184.7	protein_coding	8/8	chr1	206012254
chr1:206012285	C C	T T	1	a0001c0002t0002g0050 a0001c0002t0002g0050	1	HG03195.hp1 HG03195.hp1	intron_variant	MODIFIER	c.1026+23G>A c.1026+23G>A	CTSE	ENSG00000196188.12	transcript	ENST00000358184.7	protein_coding	8/8	chr1	206012285
chr1:206012485	C C	T T	1	a0005c0009t0001g0081 a0005c0009t0001g0081	1	NA19030.hp1 NA19030.hp1	intron_variant	MODIFIER	c.927+23G>A c.927+23G>A	CTSE	ENSG00000196188.12	transcript	ENST00000358184.7	protein_coding	7/8	chr1	206012485
chr1:206012500	G G	A A	1	a0001c0001t0001g0008 a0001c0001t0001g0008	6	HG02698.hp2 HG03017.hp1 HG03491.hp2 others(3): Show HG02698.hp2 HG03017.hp1 HG03491.hp2 HG03492.hp1 HG03654.hp1 HG03710.hp1	splice_region_variant&intron_variant	LOW	c.927+8C>T c.927+8C>T	CTSE	ENSG00000196188.12	transcript	ENST00000358184.7	protein_coding	7/8	chr1	206012500
chr1:206012671	C C	A A	2	a0001c0001t0002g0052 a0001c0007t0021g0077 a0001c0001t0002g0052 a0001c0007t0021g0077	2	HG02630.hp1 HG03098.hp1 HG02630.hp1 HG03098.hp1	intron_variant	MODIFIER	c.786-22G>T c.786-22G>T	CTSE	ENSG00000196188.12	transcript	ENST00000358184.7	protein_coding	6/8	chr1	206012671
chr1:206012704	C C	T T	1	a0001c0001t0001g0066 a0001c0001t0001g0066	1	HG06807.hp2 HG06807.hp2	intron_variant	MODIFIER	c.786-55G>A c.786-55G>A	CTSE	ENSG00000196188.12	transcript	ENST00000358184.7	protein_coding	6/8	chr1	206012704
chr1:206012721	C C	G G	44	a0001c0001t0001g0080 a0001c0001t0002g0015 a0001c0001t0002g0041 others(41): Show a0001c0001t0001g0080 a0001c0001t0002g0015 a0001c0001t0002g0041 a0001c0001t0002g0052 a0001c0001t0004g0010 a0001c0002t0001g0003 a0001c0002t0001g0006 a0001c0002t0001g0020 a0001c0002t0001g0026 a0001c0002t0001g0033 a0001c0002t0001g0035 a0001c0002t0001g0100 a0001c0002t0001g0101 a0001c0002t0001g0102 a0001c0002t0002g0024 a0001c0002t0002g0040 a0001c0002t0002g0046 a0001c0002t0002g0049 a0001c0002t0002g0050 a0001c0002t0007g0094 a0001c0002t0007g0096 a0001c0002t0014g0048 a0001c0002t0022g0098 a0001c0003t0002g0009 a0001c0003t0002g0022 a0001c0003t0002g0023 a0001c0003t0002g0047 a0001c0003t0005g0011 a0001c0003t0013g0059 a0001c0003t0013g0097 a0001c0007t0008g0068 a0001c0007t0011g0051 a0001c0007t0021g0077 a0001c0012t0001g0099 a0001c0014t0007g0095 a0002c0004t0002g0007 a0002c0004t0002g0017 a0002c0004t0002g0053 a0002c0004t0009g0025 a0002c0005t0003g0013 a0002c0005t0016g0039 a0002c0010t0001g0103 a0002c0010t0002g0054 a0007c0013t0001g0091	92	HG00140.hp2 HG00423.hp2 HG00642.hp1 others(89): Show HG00140.hp2 HG00423.hp2 HG00642.hp1 HG01069.hp1 HG01070.hp1 HG01071.hp1 HG01071.hp2 HG01099.hp2 HG01192.hp2 HG01243.hp2 HG01257.hp2 HG01258.hp1 HG01261.hp1 HG01346.hp1 HG01358.hp1 HG01361.hp1 HG01496.hp2 HG01516.hp1 HG01516.hp2 HG01517.hp2 HG01884.hp1 HG01884.hp2 HG01891.hp2 HG02055.hp1 HG02055.hp2 HG02145.hp2 HG02257.hp2 HG02258.hp2 HG02280.hp2 HG02300.hp2 HG02559.hp1 HG02559.hp2 HG02572.hp1 HG02572.hp2 HG02615.hp1 HG02622.hp1 HG02622.hp2 HG02630.hp1 HG02630.hp2 HG02647.hp1 HG02647.hp2 HG02717.hp1 HG02717.hp2 HG02723.hp1 HG02723.hp2 HG02809.hp1 HG02818.hp1 HG02818.hp2 HG02895.hp1 HG02895.hp2 HG02896.hp1 HG02896.hp2 HG02897.hp1 HG02897.hp2 HG02922.hp1 HG02922.hp2 HG02965.hp1 HG02965.hp2 HG02970.hp1 HG03017.hp2 HG03041.hp1 HG03098.hp1 HG03098.hp2 HG03139.hp1 HG03139.hp2 HG03195.hp1 HG03195.hp2 HG03225.hp1 HG03225.hp2 HG03453.hp1 HG03453.hp2 HG03471.hp1 HG03486.hp1 HG03486.hp2 HG03516.hp1 HG03540.hp1 HG03540.hp2 HG03579.hp2 HG06807.hp1 NA18522.hp1 NA18522.hp2 NA18906.hp1 NA18906.hp2 NA19030.hp2 NA19043.hp1 NA19043.hp2 NA19240.hp1 NA19240.hp2 NA20129.hp1 NA20129.hp2 NA20300.hp1 NA21309.hp1	intron_variant	MODIFIER	c.786-72G>C c.786-72G>C	CTSE	ENSG00000196188.12	transcript	ENST00000358184.7	protein_coding	6/8	chr1	206012721
chr1:206012766	G G	A A	1	a0001c0014t0007g0095 a0001c0014t0007g0095	1	HG03486.hp2 HG03486.hp2	intron_variant	MODIFIER	c.786-117C>T c.786-117C>T	CTSE	ENSG00000196188.12	transcript	ENST00000358184.7	protein_coding	6/8	chr1	206012766
chr1:206012826	C C	T T	1	a0001c0007t0011g0051 a0001c0007t0011g0051	1	HG02559.hp1 HG02559.hp1	intron_variant	MODIFIER	c.786-177G>A c.786-177G>A	CTSE	ENSG00000196188.12	transcript	ENST00000358184.7	protein_coding	6/8	chr1	206012826
chr1:206012924	G G	A A	1	a0001c0001t0001g0088 a0001c0001t0001g0088	1	NA18971.hp2 NA18971.hp2	intron_variant	MODIFIER	c.786-275C>T c.786-275C>T	CTSE	ENSG00000196188.12	transcript	ENST00000358184.7	protein_coding	6/8	chr1	206012924
chr1:206013050	T T	A A	21	a0001c0002t0001g0003 a0001c0002t0001g0020 a0001c0002t0001g0026 others(18): Show a0001c0002t0001g0003 a0001c0002t0001g0020 a0001c0002t0001g0026 a0001c0002t0001g0033 a0001c0002t0001g0035 a0001c0002t0001g0100 a0001c0002t0001g0101 a0001c0002t0001g0102 a0001c0002t0002g0024 a0001c0002t0002g0040 a0001c0002t0002g0049 a0001c0002t0002g0050 a0001c0002t0014g0048 a0001c0002t0022g0098 a0001c0012t0001g0099 a0002c0004t0002g0007 a0002c0004t0002g0017 a0002c0004t0002g0053 a0002c0004t0009g0025 a0002c0010t0001g0103 a0002c0010t0002g0054	45	HG00140.hp2 HG00423.hp2 HG00642.hp1 others(42): Show HG00140.hp2 HG00423.hp2 HG00642.hp1 HG01069.hp1 HG01070.hp1 HG01071.hp1 HG01071.hp2 HG01099.hp2 HG01192.hp2 HG01257.hp2 HG01258.hp1 HG01261.hp1 HG01346.hp1 HG01358.hp1 HG01361.hp1 HG01496.hp2 HG01516.hp1 HG01516.hp2 HG01517.hp2 HG02258.hp2 HG02280.hp2 HG02300.hp2 HG02630.hp2 HG02723.hp2 HG02809.hp1 HG02818.hp2 HG02896.hp2 HG02970.hp1 HG03017.hp2 HG03041.hp1 HG03139.hp2 HG03195.hp1 HG03225.hp2 HG03453.hp2 HG03471.hp1 HG03516.hp1 HG06807.hp1 NA18522.hp1 NA19030.hp2 NA19043.hp2 NA19240.hp1 NA20129.hp1 NA20129.hp2 NA20300.hp1 NA21309.hp1	intron_variant	MODIFIER	c.786-401A>T c.786-401A>T	CTSE	ENSG00000196188.12	transcript	ENST00000358184.7	protein_coding	6/8	chr1	206013050
chr1:206013117	C C	CT CT	45	a0001c0001t0001g0104 a0001c0001t0002g0015 a0001c0001t0002g0052 others(42): Show a0001c0001t0001g0104 a0001c0001t0002g0015 a0001c0001t0002g0052 a0001c0001t0003g0057 a0001c0001t0003g0069 a0001c0001t0004g0010 a0001c0001t0006g0016 a0001c0001t0008g0060 a0001c0001t0008g0105 a0001c0001t0010g0021 a0001c0001t0011g0055 a0001c0001t0012g0038 a0001c0001t0015g0045 a0001c0001t0017g0043 a0001c0001t0018g0056 a0001c0002t0001g0003 a0001c0002t0001g0006 a0001c0002t0001g0020 a0001c0002t0001g0026 a0001c0002t0001g0033 a0001c0002t0001g0035 a0001c0002t0001g0100 a0001c0002t0001g0101 a0001c0002t0001g0102 a0001c0002t0002g0024 a0001c0002t0002g0040 a0001c0002t0002g0046 a0001c0002t0002g0049 a0001c0002t0002g0050 a0001c0002t0007g0094 a0001c0002t0007g0096 a0001c0002t0014g0048 a0001c0002t0022g0098 a0001c0007t0008g0068 a0001c0012t0001g0099 a0001c0014t0007g0095 a0002c0004t0002g0007 a0002c0004t0002g0017 a0002c0004t0002g0053 a0002c0004t0009g0025 a0002c0005t0003g0013 a0002c0005t0016g0039 a0002c0010t0001g0103 a0002c0010t0002g0054 a0007c0013t0001g0091	88	HG00140.hp2 HG00423.hp2 HG00642.hp1 others(85): Show HG00140.hp2 HG00423.hp2 HG00642.hp1 HG01069.hp1 HG01070.hp1 HG01071.hp1 HG01071.hp2 HG01099.hp2 HG01109.hp1 HG01192.hp2 HG01257.hp2 HG01258.hp1 HG01261.hp1 HG01346.hp1 HG01358.hp1 HG01361.hp1 HG01496.hp2 HG01516.hp1 HG01516.hp2 HG01517.hp2 HG01884.hp2 HG01891.hp1 HG02055.hp1 HG02055.hp2 HG02109.hp1 HG02145.hp1 HG02145.hp2 HG02257.hp2 HG02258.hp1 HG02258.hp2 HG02280.hp1 HG02280.hp2 HG02300.hp2 HG02451.hp1 HG02451.hp2 HG02572.hp1 HG02572.hp2 HG02615.hp1 HG02622.hp1 HG02622.hp2 HG02630.hp2 HG02647.hp2 HG02723.hp2 HG02809.hp1 HG02818.hp2 HG02886.hp1 HG02895.hp1 HG02896.hp1 HG02896.hp2 HG02897.hp1 HG02897.hp2 HG02922.hp2 HG02965.hp1 HG02965.hp2 HG02970.hp1 HG02976.hp1 HG02976.hp2 HG03017.hp2 HG03041.hp1 HG03098.hp1 HG03130.hp1 HG03130.hp2 HG03139.hp1 HG03139.hp2 HG03195.hp1 HG03209.hp2 HG03225.hp2 HG03453.hp1 HG03453.hp2 HG03471.hp1 HG03486.hp2 HG03516.hp1 HG03540.hp2 HG03579.hp1 HG03579.hp2 HG06807.hp1 NA18522.hp1 NA18906.hp1 NA18975.hp1 NA19030.hp2 NA19043.hp1 NA19043.hp2 NA19240.hp1 NA19240.hp2 NA20129.hp1 NA20129.hp2 NA20300.hp1 NA21309.hp1	intron_variant	MODIFIER	c.786-469dupA c.786-469dupA	CTSE	ENSG00000196188.12	transcript	ENST00000358184.7	protein_coding	6/8	chr1	206013117
chr1:206013122	A A	C C	45	a0001c0001t0001g0104 a0001c0001t0002g0015 a0001c0001t0002g0052 others(42): Show a0001c0001t0001g0104 a0001c0001t0002g0015 a0001c0001t0002g0052 a0001c0001t0003g0057 a0001c0001t0003g0069 a0001c0001t0004g0010 a0001c0001t0006g0016 a0001c0001t0008g0060 a0001c0001t0008g0105 a0001c0001t0010g0021 a0001c0001t0011g0055 a0001c0001t0012g0038 a0001c0001t0015g0045 a0001c0001t0017g0043 a0001c0001t0018g0056 a0001c0002t0001g0003 a0001c0002t0001g0006 a0001c0002t0001g0020 a0001c0002t0001g0026 a0001c0002t0001g0033 a0001c0002t0001g0035 a0001c0002t0001g0100 a0001c0002t0001g0101 a0001c0002t0001g0102 a0001c0002t0002g0024 a0001c0002t0002g0040 a0001c0002t0002g0046 a0001c0002t0002g0049 a0001c0002t0002g0050 a0001c0002t0007g0094 a0001c0002t0007g0096 a0001c0002t0014g0048 a0001c0002t0022g0098 a0001c0007t0008g0068 a0001c0012t0001g0099 a0001c0014t0007g0095 a0002c0004t0002g0007 a0002c0004t0002g0017 a0002c0004t0002g0053 a0002c0004t0009g0025 a0002c0005t0003g0013 a0002c0005t0016g0039 a0002c0010t0001g0103 a0002c0010t0002g0054 a0007c0013t0001g0091	88	HG00140.hp2 HG00423.hp2 HG00642.hp1 others(85): Show HG00140.hp2 HG00423.hp2 HG00642.hp1 HG01069.hp1 HG01070.hp1 HG01071.hp1 HG01071.hp2 HG01099.hp2 HG01109.hp1 HG01192.hp2 HG01257.hp2 HG01258.hp1 HG01261.hp1 HG01346.hp1 HG01358.hp1 HG01361.hp1 HG01496.hp2 HG01516.hp1 HG01516.hp2 HG01517.hp2 HG01884.hp2 HG01891.hp1 HG02055.hp1 HG02055.hp2 HG02109.hp1 HG02145.hp1 HG02145.hp2 HG02257.hp2 HG02258.hp1 HG02258.hp2 HG02280.hp1 HG02280.hp2 HG02300.hp2 HG02451.hp1 HG02451.hp2 HG02572.hp1 HG02572.hp2 HG02615.hp1 HG02622.hp1 HG02622.hp2 HG02630.hp2 HG02647.hp2 HG02723.hp2 HG02809.hp1 HG02818.hp2 HG02886.hp1 HG02895.hp1 HG02896.hp1 HG02896.hp2 HG02897.hp1 HG02897.hp2 HG02922.hp2 HG02965.hp1 HG02965.hp2 HG02970.hp1 HG02976.hp1 HG02976.hp2 HG03017.hp2 HG03041.hp1 HG03098.hp1 HG03130.hp1 HG03130.hp2 HG03139.hp1 HG03139.hp2 HG03195.hp1 HG03209.hp2 HG03225.hp2 HG03453.hp1 HG03453.hp2 HG03471.hp1 HG03486.hp2 HG03516.hp1 HG03540.hp2 HG03579.hp1 HG03579.hp2 HG06807.hp1 NA18522.hp1 NA18906.hp1 NA18975.hp1 NA19030.hp2 NA19043.hp1 NA19043.hp2 NA19240.hp1 NA19240.hp2 NA20129.hp1 NA20129.hp2 NA20300.hp1 NA21309.hp1	intron_variant	MODIFIER	c.786-473T>G c.786-473T>G	CTSE	ENSG00000196188.12	transcript	ENST00000358184.7	protein_coding	6/8	chr1	206013122
chr1:206013236	G G	A A	1	a0001c0002t0001g0102 a0001c0002t0001g0102	1	HG02723.hp2 HG02723.hp2	intron_variant	MODIFIER	c.785+536C>T c.785+536C>T	CTSE	ENSG00000196188.12	transcript	ENST00000358184.7	protein_coding	6/8	chr1	206013236
chr1:206013272	C C	T T	1	a0001c0001t0001g0071 a0001c0001t0001g0071	1	HG01106.hp1 HG01106.hp1	intron_variant	MODIFIER	c.785+500G>A c.785+500G>A	CTSE	ENSG00000196188.12	transcript	ENST00000358184.7	protein_coding	6/8	chr1	206013272
chr1:206013369	C C	T T	1	a0007c0013t0001g0091 a0007c0013t0001g0091	1	HG02145.hp2 HG02145.hp2	intron_variant	MODIFIER	c.785+403G>A c.785+403G>A	CTSE	ENSG00000196188.12	transcript	ENST00000358184.7	protein_coding	6/8	chr1	206013369
chr1:206013433	A A	G G	2	a0001c0001t0001g0104 a0001c0001t0012g0038 a0001c0001t0001g0104 a0001c0001t0012g0038	3	HG02109.hp1 HG02886.hp1 HG02976.hp2 HG02109.hp1 HG02886.hp1 HG02976.hp2	intron_variant	MODIFIER	c.785+339T>C c.785+339T>C	CTSE	ENSG00000196188.12	transcript	ENST00000358184.7	protein_coding	6/8	chr1	206013433
chr1:206013567	T T	C C	51	a0001c0001t0002g0015 a0001c0001t0002g0041 a0001c0001t0002g0052 others(48): Show a0001c0001t0002g0015 a0001c0001t0002g0041 a0001c0001t0002g0052 a0001c0001t0003g0057 a0001c0001t0003g0069 a0001c0001t0004g0010 a0001c0001t0006g0016 a0001c0001t0008g0060 a0001c0001t0008g0105 a0001c0001t0010g0021 a0001c0001t0011g0055 a0001c0001t0015g0045 a0001c0001t0017g0043 a0001c0001t0018g0056 a0001c0002t0001g0003 a0001c0002t0001g0006 a0001c0002t0001g0020 a0001c0002t0001g0026 a0001c0002t0001g0033 a0001c0002t0001g0035 a0001c0002t0001g0100 a0001c0002t0001g0101 a0001c0002t0001g0102 a0001c0002t0002g0024 a0001c0002t0002g0040 a0001c0002t0002g0046 a0001c0002t0002g0049 a0001c0002t0002g0050 a0001c0002t0007g0094 a0001c0002t0007g0096 a0001c0002t0014g0048 a0001c0002t0022g0098 a0001c0003t0002g0009 a0001c0003t0002g0022 a0001c0003t0002g0023 a0001c0003t0002g0047 a0001c0003t0005g0011 a0001c0003t0013g0059 a0001c0003t0013g0097 a0001c0007t0008g0068 a0001c0012t0001g0099 a0001c0014t0007g0095 a0002c0004t0002g0007 a0002c0004t0002g0017 a0002c0004t0002g0053 a0002c0004t0009g0025 a0002c0005t0003g0013 a0002c0005t0016g0039 a0002c0010t0001g0103 a0002c0010t0002g0054 a0007c0013t0001g0091	102	HG00140.hp2 HG00423.hp2 HG00642.hp1 others(99): Show HG00140.hp2 HG00423.hp2 HG00642.hp1 HG01069.hp1 HG01070.hp1 HG01071.hp1 HG01071.hp2 HG01099.hp2 HG01109.hp1 HG01192.hp2 HG01243.hp2 HG01257.hp2 HG01258.hp1 HG01261.hp1 HG01346.hp1 HG01358.hp1 HG01361.hp1 HG01496.hp2 HG01516.hp1 HG01516.hp2 HG01517.hp2 HG01884.hp1 HG01884.hp2 HG01891.hp1 HG01891.hp2 HG02055.hp1 HG02055.hp2 HG02145.hp1 HG02145.hp2 HG02257.hp2 HG02258.hp1 HG02258.hp2 HG02280.hp1 HG02280.hp2 HG02300.hp2 HG02451.hp1 HG02451.hp2 HG02559.hp2 HG02572.hp1 HG02572.hp2 HG02615.hp1 HG02622.hp1 HG02622.hp2 HG02630.hp2 HG02647.hp1 HG02647.hp2 HG02717.hp1 HG02723.hp1 HG02723.hp2 HG02809.hp1 HG02818.hp1 HG02818.hp2 HG02895.hp1 HG02895.hp2 HG02896.hp1 HG02896.hp2 HG02897.hp1 HG02897.hp2 HG02922.hp1 HG02922.hp2 HG02965.hp1 HG02965.hp2 HG02970.hp1 HG02976.hp1 HG03017.hp2 HG03041.hp1 HG03098.hp1 HG03098.hp2 HG03130.hp1 HG03130.hp2 HG03139.hp1 HG03139.hp2 HG03195.hp1 HG03195.hp2 HG03209.hp2 HG03225.hp1 HG03225.hp2 HG03453.hp1 HG03453.hp2 HG03471.hp1 HG03486.hp1 HG03486.hp2 HG03516.hp1 HG03540.hp1 HG03540.hp2 HG03579.hp1 HG03579.hp2 HG06807.hp1 NA18522.hp1 NA18522.hp2 NA18906.hp1 NA18906.hp2 NA18975.hp1 NA19030.hp2 NA19043.hp1 NA19043.hp2 NA19240.hp1 NA19240.hp2 NA20129.hp1 NA20129.hp2 NA20300.hp1 NA21309.hp1	intron_variant	MODIFIER	c.785+205A>G c.785+205A>G	CTSE	ENSG00000196188.12	transcript	ENST00000358184.7	protein_coding	6/8	chr1	206013567
chr1:206013770	A A	G G	1	a0001c0014t0007g0095 a0001c0014t0007g0095	1	HG03486.hp2 HG03486.hp2	splice_donor_variant&intron_variant	HIGH	c.785+2T>C c.785+2T>C	CTSE	ENSG00000196188.12	transcript	ENST00000358184.7	protein_coding	6/8	chr1	206013770
chr1:206014153	G G	T T	1	a0001c0001t0001g0065 a0001c0001t0001g0065	1	HG01070.hp2 HG01070.hp2	intron_variant	MODIFIER	c.663-259C>A c.663-259C>A	CTSE	ENSG00000196188.12	transcript	ENST00000358184.7	protein_coding	5/8	chr1	206014153
chr1:206014205	G G	A A	6	a0001c0001t0001g0004 a0001c0001t0001g0008 a0001c0001t0001g0029 others(3): Show a0001c0001t0001g0004 a0001c0001t0001g0008 a0001c0001t0001g0029 a0001c0001t0001g0030 a0001c0001t0001g0083 a0001c0007t0021g0077	21	HG00544.hp2 HG00609.hp2 HG00741.hp1 others(18): Show HG00544.hp2 HG00609.hp2 HG00741.hp1 HG01515.hp1 HG02273.hp1 HG02615.hp2 HG02630.hp1 HG02698.hp2 HG03017.hp1 HG03471.hp2 HG03490.hp1 HG03491.hp2 HG03492.hp1 HG03654.hp1 HG03688.hp2 HG03704.hp1 HG03710.hp1 HG03710.hp2 HG03927.hp1 HG04199.hp1 NA21309.hp2	intron_variant	MODIFIER	c.663-311C>T c.663-311C>T	CTSE	ENSG00000196188.12	transcript	ENST00000358184.7	protein_coding	5/8	chr1	206014205
chr1:206014356	C C	G G	1	a0001c0001t0001g0014 a0001c0001t0001g0014	4	HG02809.hp2 HG03041.hp2 HG03209.hp1 others(1): Show HG02809.hp2 HG03041.hp2 HG03209.hp1 HG03516.hp2	intron_variant	MODIFIER	c.663-462G>C c.663-462G>C	CTSE	ENSG00000196188.12	transcript	ENST00000358184.7	protein_coding	5/8	chr1	206014356
chr1:206014439	C C	T T	1	a0001c0001t0001g0030 a0001c0001t0001g0030	2	HG02615.hp2 HG03471.hp2 HG02615.hp2 HG03471.hp2	intron_variant	MODIFIER	c.663-545G>A c.663-545G>A	CTSE	ENSG00000196188.12	transcript	ENST00000358184.7	protein_coding	5/8	chr1	206014439
chr1:206014606	G G	A A	2	a0002c0005t0003g0013 a0002c0005t0016g0039 a0002c0005t0003g0013 a0002c0005t0016g0039	5	HG02572.hp1 HG02622.hp2 HG02965.hp2 others(2): Show HG02572.hp1 HG02622.hp2 HG02965.hp2 HG03139.hp1 HG03453.hp1	intron_variant	MODIFIER	c.663-712C>T c.663-712C>T	CTSE	ENSG00000196188.12	transcript	ENST00000358184.7	protein_coding	5/8	chr1	206014606
chr1:206014613	G G	A A	1	a0001c0001t0002g0044 a0001c0001t0002g0044	1	HG03704.hp2 HG03704.hp2	intron_variant	MODIFIER	c.663-719C>T c.663-719C>T	CTSE	ENSG00000196188.12	transcript	ENST00000358184.7	protein_coding	5/8	chr1	206014613
chr1:206014740	C C	A A	5	a0001c0001t0003g0057 a0001c0001t0003g0069 a0001c0001t0010g0021 others(2): Show a0001c0001t0003g0057 a0001c0001t0003g0069 a0001c0001t0010g0021 a0001c0001t0017g0043 a0001c0007t0008g0068	6	HG02145.hp1 HG02451.hp2 HG02976.hp1 others(3): Show HG02145.hp1 HG02451.hp2 HG02976.hp1 HG03130.hp2 HG03579.hp1 NA18906.hp1	intron_variant	MODIFIER	c.663-846G>T c.663-846G>T	CTSE	ENSG00000196188.12	transcript	ENST00000358184.7	protein_coding	5/8	chr1	206014740
chr1:206014765	C C	A A	1	a0001c0002t0001g0100 a0001c0002t0001g0100	1	HG01192.hp2 HG01192.hp2	intron_variant	MODIFIER	c.663-871G>T c.663-871G>T	CTSE	ENSG00000196188.12	transcript	ENST00000358184.7	protein_coding	5/8	chr1	206014765
chr1:206014801	G G	C C	1	a0001c0001t0001g0078 a0001c0001t0001g0078	1	NA18953.hp1 NA18953.hp1	intron_variant	MODIFIER	c.663-907C>G c.663-907C>G	CTSE	ENSG00000196188.12	transcript	ENST00000358184.7	protein_coding	5/8	chr1	206014801
chr1:206014870	T T	C C	51	a0001c0001t0001g0104 a0001c0001t0002g0015 a0001c0001t0002g0041 others(48): Show a0001c0001t0001g0104 a0001c0001t0002g0015 a0001c0001t0002g0041 a0001c0001t0002g0052 a0001c0001t0003g0057 a0001c0001t0003g0069 a0001c0001t0004g0010 a0001c0001t0006g0016 a0001c0001t0008g0060 a0001c0001t0008g0105 a0001c0001t0010g0021 a0001c0001t0011g0055 a0001c0001t0012g0038 a0001c0001t0015g0045 a0001c0001t0017g0043 a0001c0001t0018g0056 a0001c0002t0001g0003 a0001c0002t0001g0006 a0001c0002t0001g0020 a0001c0002t0001g0026 a0001c0002t0001g0033 a0001c0002t0001g0035 a0001c0002t0001g0100 a0001c0002t0001g0101 a0001c0002t0001g0102 a0001c0002t0002g0024 a0001c0002t0002g0040 a0001c0002t0002g0046 a0001c0002t0002g0049 a0001c0002t0002g0050 a0001c0002t0007g0094 a0001c0002t0007g0096 a0001c0002t0014g0048 a0001c0002t0022g0098 a0001c0003t0002g0009 a0001c0003t0002g0022 a0001c0003t0002g0023 a0001c0003t0002g0047 a0001c0003t0005g0011 a0001c0003t0013g0059 a0001c0003t0013g0097 a0001c0007t0008g0068 a0001c0012t0001g0099 a0001c0014t0007g0095 a0002c0004t0002g0007 a0002c0004t0002g0017 a0002c0004t0002g0053 a0002c0004t0009g0025 a0002c0005t0003g0013 a0002c0005t0016g0039 a0007c0013t0001g0091	103	HG00140.hp2 HG00423.hp2 HG00642.hp1 others(100): Show HG00140.hp2 HG00423.hp2 HG00642.hp1 HG01069.hp1 HG01070.hp1 HG01071.hp1 HG01071.hp2 HG01099.hp2 HG01109.hp1 HG01192.hp2 HG01243.hp2 HG01257.hp2 HG01258.hp1 HG01261.hp1 HG01346.hp1 HG01358.hp1 HG01361.hp1 HG01496.hp2 HG01516.hp1 HG01516.hp2 HG01517.hp2 HG01884.hp1 HG01884.hp2 HG01891.hp1 HG01891.hp2 HG02055.hp1 HG02055.hp2 HG02109.hp1 HG02145.hp1 HG02145.hp2 HG02257.hp2 HG02258.hp1 HG02258.hp2 HG02280.hp1 HG02280.hp2 HG02300.hp2 HG02451.hp1 HG02451.hp2 HG02559.hp2 HG02572.hp1 HG02572.hp2 HG02615.hp1 HG02622.hp1 HG02622.hp2 HG02647.hp1 HG02647.hp2 HG02717.hp1 HG02723.hp1 HG02723.hp2 HG02809.hp1 HG02818.hp1 HG02818.hp2 HG02886.hp1 HG02895.hp1 HG02895.hp2 HG02896.hp1 HG02896.hp2 HG02897.hp1 HG02897.hp2 HG02922.hp1 HG02922.hp2 HG02965.hp1 HG02965.hp2 HG02970.hp1 HG02976.hp1 HG02976.hp2 HG03017.hp2 HG03041.hp1 HG03098.hp1 HG03098.hp2 HG03130.hp1 HG03130.hp2 HG03139.hp1 HG03139.hp2 HG03195.hp1 HG03195.hp2 HG03209.hp2 HG03225.hp1 HG03225.hp2 HG03453.hp1 HG03453.hp2 HG03471.hp1 HG03486.hp1 HG03486.hp2 HG03516.hp1 HG03540.hp1 HG03540.hp2 HG03579.hp1 HG03579.hp2 HG06807.hp1 NA18522.hp2 NA18906.hp1 NA18906.hp2 NA18975.hp1 NA19030.hp2 NA19043.hp1 NA19043.hp2 NA19240.hp1 NA19240.hp2 NA20129.hp1 NA20129.hp2 NA20300.hp1 NA21309.hp1	intron_variant	MODIFIER	c.663-976A>G c.663-976A>G	CTSE	ENSG00000196188.12	transcript	ENST00000358184.7	protein_coding	5/8	chr1	206014870
chr1:206014933	G G	T T	7	a0001c0003t0002g0009 a0001c0003t0002g0022 a0001c0003t0002g0023 others(4): Show a0001c0003t0002g0009 a0001c0003t0002g0022 a0001c0003t0002g0023 a0001c0003t0002g0047 a0001c0003t0005g0011 a0001c0003t0013g0059 a0001c0003t0013g0097	16	HG01243.hp2 HG01884.hp1 HG01891.hp2 others(13): Show HG01243.hp2 HG01884.hp1 HG01891.hp2 HG02559.hp2 HG02647.hp1 HG02717.hp1 HG02723.hp1 HG02818.hp1 HG02895.hp2 HG02922.hp1 HG03098.hp2 HG03195.hp2 HG03225.hp1 HG03486.hp1 NA18522.hp2 NA18906.hp2	intron_variant	MODIFIER	c.662+998C>A c.662+998C>A	CTSE	ENSG00000196188.12	transcript	ENST00000358184.7	protein_coding	5/8	chr1	206014933
chr1:206015119	A A	AT AT	79	a0001c0001t0001g0002 a0001c0001t0001g0004 a0001c0001t0001g0008 others(76): Show a0001c0001t0001g0002 a0001c0001t0001g0004 a0001c0001t0001g0008 a0001c0001t0001g0014 a0001c0001t0001g0019 a0001c0001t0001g0027 a0001c0001t0001g0029 a0001c0001t0001g0030 a0001c0001t0001g0031 a0001c0001t0001g0032 a0001c0001t0001g0034 a0001c0001t0001g0058 a0001c0001t0001g0070 a0001c0001t0001g0071 a0001c0001t0001g0073 a0001c0001t0001g0080 a0001c0001t0001g0083 a0001c0001t0001g0092 a0001c0001t0001g0104 a0001c0001t0001g0107 a0001c0001t0002g0015 a0001c0001t0002g0041 a0001c0001t0002g0052 a0001c0001t0003g0057 a0001c0001t0003g0069 a0001c0001t0004g0010 a0001c0001t0006g0016 a0001c0001t0008g0060 a0001c0001t0008g0105 a0001c0001t0010g0021 a0001c0001t0011g0055 a0001c0001t0012g0038 a0001c0001t0015g0045 a0001c0001t0017g0043 a0001c0001t0018g0056 a0001c0001t0020g0072 a0001c0002t0001g0003 a0001c0002t0001g0006 a0001c0002t0001g0020 a0001c0002t0001g0026 a0001c0002t0001g0033 a0001c0002t0001g0035 a0001c0002t0001g0100 a0001c0002t0001g0101 a0001c0002t0001g0102 a0001c0002t0002g0024 a0001c0002t0002g0040 a0001c0002t0002g0046 a0001c0002t0002g0049 a0001c0002t0002g0050 a0001c0002t0007g0094 a0001c0002t0007g0096 a0001c0002t0014g0048 a0001c0002t0022g0098 a0001c0003t0002g0009 a0001c0003t0002g0022 a0001c0003t0002g0023 a0001c0003t0002g0047 a0001c0003t0005g0011 a0001c0003t0013g0059 a0001c0003t0013g0097 a0001c0007t0008g0068 a0001c0007t0011g0051 a0001c0007t0021g0077 a0001c0012t0001g0099 a0001c0014t0007g0095 a0002c0004t0002g0007 a0002c0004t0002g0017 a0002c0004t0002g0053 a0002c0004t0009g0025 a0002c0005t0003g0013 a0002c0005t0016g0039 a0002c0010t0001g0103 a0002c0010t0002g0054 a0004c0008t0001g0018 a0005c0009t0001g0081 a0005c0009t0001g0082 a0007c0013t0001g0091 a0009c0011t0002g0042	184	HG00099.hp1 HG00099.hp2 HG00140.hp2 others(181): Show HG00099.hp1 HG00099.hp2 HG00140.hp2 HG00423.hp1 HG00423.hp2 HG00438.hp1 HG00544.hp2 HG00597.hp2 HG00609.hp2 HG00639.hp2 HG00642.hp1 HG00733.hp1 HG00738.hp2 HG00741.hp1 HG01069.hp1 HG01069.hp2 HG01070.hp1 HG01071.hp1 HG01071.hp2 HG01074.hp2 HG01099.hp2 HG01106.hp1 HG01109.hp1 HG01109.hp2 HG01175.hp1 HG01192.hp2 HG01243.hp2 HG01257.hp2 HG01258.hp1 HG01261.hp1 HG01346.hp1 HG01358.hp1 HG01361.hp1 HG01361.hp2 HG01433.hp1 HG01496.hp2 HG01515.hp1 HG01516.hp1 HG01516.hp2 HG01517.hp2 HG01884.hp1 HG01884.hp2 HG01891.hp1 HG01891.hp2 HG01978.hp1 HG01978.hp2 HG01981.hp1 HG01993.hp2 HG02027.hp2 HG02055.hp1 HG02055.hp2 HG02109.hp1 HG02109.hp2 HG02129.hp1 HG02135.hp2 HG02145.hp1 HG02145.hp2 HG02155.hp1 HG02155.hp2 HG02165.hp2 HG02257.hp2 HG02258.hp1 HG02258.hp2 HG02273.hp1 HG02280.hp1 HG02280.hp2 HG02293.hp1 HG02300.hp2 HG02451.hp1 HG02451.hp2 HG02559.hp1 HG02559.hp2 HG02572.hp1 HG02572.hp2 HG02615.hp1 HG02615.hp2 HG02622.hp1 HG02622.hp2 HG02630.hp1 HG02630.hp2 HG02647.hp1 HG02647.hp2 HG02698.hp2 HG02717.hp1 HG02717.hp2 HG02723.hp1 HG02723.hp2 HG02738.hp1 HG02809.hp1 HG02809.hp2 HG02818.hp1 HG02818.hp2 HG02886.hp1 HG02886.hp2 HG02895.hp1 HG02895.hp2 HG02896.hp1 HG02896.hp2 HG02897.hp1 HG02897.hp2 HG02922.hp1 HG02922.hp2 HG02965.hp1 HG02965.hp2 HG02970.hp1 HG02976.hp1 HG02976.hp2 HG03017.hp1 HG03017.hp2 HG03041.hp1 HG03041.hp2 HG03098.hp1 HG03098.hp2 HG03130.hp1 HG03130.hp2 HG03139.hp1 HG03139.hp2 HG03195.hp1 HG03195.hp2 HG03209.hp1 HG03209.hp2 HG03225.hp1 HG03225.hp2 HG03453.hp1 HG03453.hp2 HG03471.hp1 HG03471.hp2 HG03486.hp1 HG03486.hp2 HG03490.hp1 HG03491.hp2 HG03492.hp1 HG03516.hp1 HG03516.hp2 HG03540.hp1 HG03540.hp2 HG03579.hp1 HG03579.hp2 HG03654.hp1 HG03688.hp1 HG03688.hp2 HG03704.hp1 HG03710.hp1 HG03710.hp2 HG03834.hp1 HG03834.hp2 HG03927.hp1 HG03942.hp1 HG04199.hp1 HG04204.hp1 HG04204.hp2 HG06807.hp1 NA18522.hp1 NA18522.hp2 NA18612.hp1 NA18747.hp2 NA18906.hp1 NA18906.hp2 NA18943.hp1 NA18954.hp1 NA18959.hp2 NA18975.hp1 NA18975.hp2 NA18990.hp1 NA19000.hp2 NA19005.hp2 NA19030.hp1 NA19030.hp2 NA19043.hp1 NA19043.hp2 NA19055.hp2 NA19065.hp1 NA19090.hp2 NA19240.hp1 NA19240.hp2 NA20129.hp1 NA20129.hp2 NA20300.hp1 NA20752.hp1 NA20805.hp1 NA20905.hp1 NA21309.hp1 NA21309.hp2 homoSapiens_chm13v2.hp1	intron_variant	MODIFIER	c.662+811dupA c.662+811dupA	CTSE	ENSG00000196188.12	transcript	ENST00000358184.7	protein_coding	5/8	chr1	206015119
chr1:206015129	T T	C C	9	a0001c0001t0003g0057 a0001c0001t0003g0069 a0001c0001t0008g0060 others(6): Show a0001c0001t0003g0057 a0001c0001t0003g0069 a0001c0001t0008g0060 a0001c0001t0008g0105 a0001c0001t0010g0021 a0001c0001t0011g0055 a0001c0001t0017g0043 a0001c0001t0018g0056 a0001c0007t0008g0068	10	HG01109.hp1 HG01891.hp1 HG02145.hp1 others(7): Show HG01109.hp1 HG01891.hp1 HG02145.hp1 HG02451.hp2 HG02976.hp1 HG03130.hp2 HG03209.hp2 HG03579.hp1 NA18906.hp1 NA18975.hp1	intron_variant	MODIFIER	c.662+802A>G c.662+802A>G	CTSE	ENSG00000196188.12	transcript	ENST00000358184.7	protein_coding	5/8	chr1	206015129
chr1:206015183	C C	T T	1	a0001c0001t0001g0079 a0001c0001t0001g0079	1	HG03654.hp2 HG03654.hp2	intron_variant	MODIFIER	c.662+748G>A c.662+748G>A	CTSE	ENSG00000196188.12	transcript	ENST00000358184.7	protein_coding	5/8	chr1	206015183
chr1:206015277	C C	T T	1	a0001c0001t0001g0078 a0001c0001t0001g0078	1	NA18953.hp1 NA18953.hp1	intron_variant	MODIFIER	c.662+654G>A c.662+654G>A	CTSE	ENSG00000196188.12	transcript	ENST00000358184.7	protein_coding	5/8	chr1	206015277
chr1:206015327	C C	A A	1	a0001c0001t0001g0027 a0001c0001t0001g0027	2	HG02135.hp2 NA18959.hp2 HG02135.hp2 NA18959.hp2	intron_variant	MODIFIER	c.662+604G>T c.662+604G>T	CTSE	ENSG00000196188.12	transcript	ENST00000358184.7	protein_coding	5/8	chr1	206015327
chr1:206015361	A A	G G	1	a0001c0007t0021g0077 a0001c0007t0021g0077	1	HG02630.hp1 HG02630.hp1	intron_variant	MODIFIER	c.662+570T>C c.662+570T>C	CTSE	ENSG00000196188.12	transcript	ENST00000358184.7	protein_coding	5/8	chr1	206015361
chr1:206015421	C C	A A	3	a0001c0001t0008g0060 a0001c0001t0008g0105 a0001c0001t0011g0055 a0001c0001t0008g0060 a0001c0001t0008g0105 a0001c0001t0011g0055	3	HG01109.hp1 HG01891.hp1 HG03209.hp2 HG01109.hp1 HG01891.hp1 HG03209.hp2	intron_variant	MODIFIER	c.662+510G>T c.662+510G>T	CTSE	ENSG00000196188.12	transcript	ENST00000358184.7	protein_coding	5/8	chr1	206015421
chr1:206015627	G G	A A	1	a0001c0003t0002g0023 a0001c0003t0002g0023	2	HG01243.hp2 HG02723.hp1 HG01243.hp2 HG02723.hp1	intron_variant	MODIFIER	c.662+304C>T c.662+304C>T	CTSE	ENSG00000196188.12	transcript	ENST00000358184.7	protein_coding	5/8	chr1	206015627
chr1:206015713	G G	A A	20	a0001c0002t0001g0003 a0001c0002t0001g0020 a0001c0002t0001g0026 others(17): Show a0001c0002t0001g0003 a0001c0002t0001g0020 a0001c0002t0001g0026 a0001c0002t0001g0033 a0001c0002t0001g0035 a0001c0002t0001g0100 a0001c0002t0001g0101 a0001c0002t0001g0102 a0001c0002t0002g0024 a0001c0002t0002g0049 a0001c0002t0002g0050 a0001c0002t0014g0048 a0001c0002t0022g0098 a0001c0012t0001g0099 a0002c0004t0002g0007 a0002c0004t0002g0017 a0002c0004t0002g0053 a0002c0004t0009g0025 a0002c0010t0001g0103 a0002c0010t0002g0054	44	HG00140.hp2 HG00423.hp2 HG00642.hp1 others(41): Show HG00140.hp2 HG00423.hp2 HG00642.hp1 HG01069.hp1 HG01070.hp1 HG01071.hp1 HG01071.hp2 HG01099.hp2 HG01192.hp2 HG01257.hp2 HG01258.hp1 HG01261.hp1 HG01346.hp1 HG01358.hp1 HG01361.hp1 HG01496.hp2 HG01516.hp1 HG01516.hp2 HG01517.hp2 HG02258.hp2 HG02280.hp2 HG02300.hp2 HG02630.hp2 HG02723.hp2 HG02809.hp1 HG02818.hp2 HG02896.hp2 HG02970.hp1 HG03017.hp2 HG03041.hp1 HG03139.hp2 HG03195.hp1 HG03225.hp2 HG03453.hp2 HG03471.hp1 HG03516.hp1 HG06807.hp1 NA18522.hp1 NA19030.hp2 NA19043.hp2 NA19240.hp1 NA20129.hp1 NA20129.hp2 NA20300.hp1	intron_variant	MODIFIER	c.662+218C>T c.662+218C>T	CTSE	ENSG00000196188.12	transcript	ENST00000358184.7	protein_coding	5/8	chr1	206015713
chr1:206015770	T T	C C	1	a0001c0001t0001g0073 a0001c0001t0001g0073	1	HG02293.hp1 HG02293.hp1	intron_variant	MODIFIER	c.662+161A>G c.662+161A>G	CTSE	ENSG00000196188.12	transcript	ENST00000358184.7	protein_coding	5/8	chr1	206015770
chr1:206015820	G G	A A	1	a0001c0007t0011g0051 a0001c0007t0011g0051	1	HG02559.hp1 HG02559.hp1	intron_variant	MODIFIER	c.662+111C>T c.662+111C>T	CTSE	ENSG00000196188.12	transcript	ENST00000358184.7	protein_coding	5/8	chr1	206015820
chr1:206015858	G G	A A	7	a0001c0001t0002g0015 a0001c0001t0004g0010 a0001c0002t0001g0006 others(4): Show a0001c0001t0002g0015 a0001c0001t0004g0010 a0001c0002t0001g0006 a0001c0002t0002g0046 a0001c0002t0007g0094 a0001c0002t0007g0096 a0001c0014t0007g0095	19	HG01884.hp2 HG02055.hp1 HG02055.hp2 others(16): Show HG01884.hp2 HG02055.hp1 HG02055.hp2 HG02257.hp2 HG02572.hp2 HG02615.hp1 HG02622.hp1 HG02647.hp2 HG02895.hp1 HG02896.hp1 HG02897.hp1 HG02897.hp2 HG02922.hp2 HG02965.hp1 HG03486.hp2 HG03540.hp2 HG03579.hp2 NA19043.hp1 NA19240.hp2	intron_variant	MODIFIER	c.662+73C>T c.662+73C>T	CTSE	ENSG00000196188.12	transcript	ENST00000358184.7	protein_coding	5/8	chr1	206015858
chr1:206015870	G G	GT GT	9	a0001c0001t0003g0057 a0001c0001t0003g0069 a0001c0001t0008g0060 others(6): Show a0001c0001t0003g0057 a0001c0001t0003g0069 a0001c0001t0008g0060 a0001c0001t0008g0105 a0001c0001t0010g0021 a0001c0001t0011g0055 a0001c0001t0017g0043 a0001c0001t0018g0056 a0001c0007t0008g0068	10	HG01109.hp1 HG01891.hp1 HG02145.hp1 others(7): Show HG01109.hp1 HG01891.hp1 HG02145.hp1 HG02451.hp2 HG02976.hp1 HG03130.hp2 HG03209.hp2 HG03579.hp1 NA18906.hp1 NA18975.hp1	intron_variant	MODIFIER	c.662+60dupA c.662+60dupA	CTSE	ENSG00000196188.12	transcript	ENST00000358184.7	protein_coding	5/8	chr1	206015870
chr1:206016289	A A	G G	2	a0001c0001t0001g0076 a0001c0001t0001g0092 a0001c0001t0001g0076 a0001c0001t0001g0092	2	NA18990.hp2 NA19090.hp2 NA18990.hp2 NA19090.hp2	intron_variant	MODIFIER	c.463-159T>C c.463-159T>C	CTSE	ENSG00000196188.12	transcript	ENST00000358184.7	protein_coding	4/8	chr1	206016289
chr1:206016338	C C	T T	2	a0001c0001t0001g0014 a0001c0001t0001g0107 a0001c0001t0001g0014 a0001c0001t0001g0107	5	HG01109.hp2 HG02809.hp2 HG03041.hp2 others(2): Show HG01109.hp2 HG02809.hp2 HG03041.hp2 HG03209.hp1 HG03516.hp2	intron_variant	MODIFIER	c.463-208G>A c.463-208G>A	CTSE	ENSG00000196188.12	transcript	ENST00000358184.7	protein_coding	4/8	chr1	206016338
chr1:206016339	G G	A A	2	a0001c0002t0002g0049 a0001c0002t0014g0048 a0001c0002t0002g0049 a0001c0002t0014g0048	2	HG03041.hp1 HG03453.hp2 HG03041.hp1 HG03453.hp2	intron_variant	MODIFIER	c.463-209C>T c.463-209C>T	CTSE	ENSG00000196188.12	transcript	ENST00000358184.7	protein_coding	4/8	chr1	206016339
chr1:206016511	T T	TTTTGCCT others(17): Show TTTTGCCTACCTTAAGGTCATGAAA	1	a0001c0001t0001g0070 a0001c0001t0001g0070	1	NA20905.hp1 NA20905.hp1	intron_variant	MODIFIER	c.463-405_463-382dup others(24): Show c.463-405_463-382dupTTTCATGACCTTAAGGTAGGCAAA	CTSE	ENSG00000196188.12	transcript	ENST00000358184.7	protein_coding	4/8	chr1	206016511
chr1:206016634	A A	C C	1	a0001c0001t0018g0056 a0001c0001t0018g0056	1	NA18975.hp1 NA18975.hp1	intron_variant	MODIFIER	c.463-504T>G c.463-504T>G	CTSE	ENSG00000196188.12	transcript	ENST00000358184.7	protein_coding	4/8	chr1	206016634
chr1:206016638	T T	G G	1	a0001c0001t0003g0057 a0001c0001t0003g0057	1	HG02976.hp1 HG02976.hp1	intron_variant	MODIFIER	c.463-508A>C c.463-508A>C	CTSE	ENSG00000196188.12	transcript	ENST00000358184.7	protein_coding	4/8	chr1	206016638
chr1:206016677	A A	G G	1	a0001c0001t0001g0029 a0001c0001t0001g0029	2	HG00544.hp2 HG00609.hp2 HG00544.hp2 HG00609.hp2	intron_variant	MODIFIER	c.463-547T>C c.463-547T>C	CTSE	ENSG00000196188.12	transcript	ENST00000358184.7	protein_coding	4/8	chr1	206016677
chr1:206016694	T T	G G	2	a0001c0002t0001g0101 a0001c0002t0001g0102 a0001c0002t0001g0101 a0001c0002t0001g0102	2	HG02723.hp2 HG03225.hp2 HG02723.hp2 HG03225.hp2	intron_variant	MODIFIER	c.463-564A>C c.463-564A>C	CTSE	ENSG00000196188.12	transcript	ENST00000358184.7	protein_coding	4/8	chr1	206016694
chr1:206016757	T T	C C	10	a0001c0001t0003g0057 a0001c0001t0003g0069 a0001c0001t0006g0016 others(7): Show a0001c0001t0003g0057 a0001c0001t0003g0069 a0001c0001t0006g0016 a0001c0001t0008g0060 a0001c0001t0008g0105 a0001c0001t0010g0021 a0001c0001t0011g0055 a0001c0001t0017g0043 a0001c0001t0018g0056 a0001c0007t0008g0068	13	HG01109.hp1 HG01891.hp1 HG02145.hp1 others(10): Show HG01109.hp1 HG01891.hp1 HG02145.hp1 HG02258.hp1 HG02280.hp1 HG02451.hp1 HG02451.hp2 HG02976.hp1 HG03130.hp2 HG03209.hp2 HG03579.hp1 NA18906.hp1 NA18975.hp1	intron_variant	MODIFIER	c.463-627A>G c.463-627A>G	CTSE	ENSG00000196188.12	transcript	ENST00000358184.7	protein_coding	4/8	chr1	206016757
chr1:206016906	T T	C C	1	a0001c0001t0001g0106 a0001c0001t0001g0106	1	NA19055.hp1 NA19055.hp1	intron_variant	MODIFIER	c.463-776A>G c.463-776A>G	CTSE	ENSG00000196188.12	transcript	ENST00000358184.7	protein_coding	4/8	chr1	206016906
chr1:206016948	T T	C C	1	a0001c0001t0001g0089 a0001c0001t0001g0089	1	NA19001.hp2 NA19001.hp2	intron_variant	MODIFIER	c.463-818A>G c.463-818A>G	CTSE	ENSG00000196188.12	transcript	ENST00000358184.7	protein_coding	4/8	chr1	206016948
chr1:206016996	A A	T T	23	a0001c0002t0001g0003 a0001c0002t0001g0020 a0001c0002t0001g0026 others(20): Show a0001c0002t0001g0003 a0001c0002t0001g0020 a0001c0002t0001g0026 a0001c0002t0001g0033 a0001c0002t0001g0035 a0001c0002t0001g0100 a0001c0002t0001g0101 a0001c0002t0001g0102 a0001c0002t0002g0024 a0001c0002t0002g0049 a0001c0002t0002g0050 a0001c0002t0014g0048 a0001c0002t0022g0098 a0001c0012t0001g0099 a0002c0004t0002g0007 a0002c0004t0002g0017 a0002c0004t0002g0053 a0002c0004t0009g0025 a0002c0005t0003g0013 a0002c0005t0016g0039 a0002c0010t0001g0103 a0002c0010t0002g0054 a0007c0013t0001g0091	50	HG00140.hp2 HG00423.hp2 HG00642.hp1 others(47): Show HG00140.hp2 HG00423.hp2 HG00642.hp1 HG01069.hp1 HG01070.hp1 HG01071.hp1 HG01071.hp2 HG01099.hp2 HG01192.hp2 HG01257.hp2 HG01258.hp1 HG01261.hp1 HG01346.hp1 HG01358.hp1 HG01361.hp1 HG01496.hp2 HG01516.hp1 HG01516.hp2 HG01517.hp2 HG02145.hp2 HG02258.hp2 HG02280.hp2 HG02300.hp2 HG02572.hp1 HG02622.hp2 HG02630.hp2 HG02723.hp2 HG02809.hp1 HG02818.hp2 HG02896.hp2 HG02965.hp2 HG02970.hp1 HG03017.hp2 HG03041.hp1 HG03139.hp1 HG03139.hp2 HG03195.hp1 HG03225.hp2 HG03453.hp1 HG03453.hp2 HG03471.hp1 HG03516.hp1 HG06807.hp1 NA18522.hp1 NA19030.hp2 NA19043.hp2 NA19240.hp1 NA20129.hp1 NA20129.hp2 NA20300.hp1	intron_variant	MODIFIER	c.463-866T>A c.463-866T>A	CTSE	ENSG00000196188.12	transcript	ENST00000358184.7	protein_coding	4/8	chr1	206016996
chr1:206017058	C C	A A	2	a0001c0001t0002g0041 a0001c0002t0002g0040 a0001c0001t0002g0041 a0001c0002t0002g0040	2	HG03540.hp1 NA21309.hp1 HG03540.hp1 NA21309.hp1	intron_variant	MODIFIER	c.463-928G>T c.463-928G>T	CTSE	ENSG00000196188.12	transcript	ENST00000358184.7	protein_coding	4/8	chr1	206017058
chr1:206017175	A A	G G	2	a0001c0001t0001g0104 a0001c0001t0012g0038 a0001c0001t0001g0104 a0001c0001t0012g0038	3	HG02109.hp1 HG02886.hp1 HG02976.hp2 HG02109.hp1 HG02886.hp1 HG02976.hp2	intron_variant	MODIFIER	c.463-1045T>C c.463-1045T>C	CTSE	ENSG00000196188.12	transcript	ENST00000358184.7	protein_coding	4/8	chr1	206017175
chr1:206017461	G G	A A	5	a0001c0001t0001g0014 a0001c0001t0001g0058 a0001c0001t0001g0107 others(2): Show a0001c0001t0001g0014 a0001c0001t0001g0058 a0001c0001t0001g0107 a0001c0007t0011g0051 a0009c0011t0002g0042	8	HG01109.hp2 HG02559.hp1 HG02809.hp2 others(5): Show HG01109.hp2 HG02559.hp1 HG02809.hp2 HG02886.hp2 HG03041.hp2 HG03209.hp1 HG03516.hp2 HG03834.hp2	intron_variant	MODIFIER	c.463-1331C>T c.463-1331C>T	CTSE	ENSG00000196188.12	transcript	ENST00000358184.7	protein_coding	4/8	chr1	206017461
chr1:206017671	G G	T T	1	a0001c0001t0001g0075 a0001c0001t0001g0075	1	HG02071.hp1 HG02071.hp1	intron_variant	MODIFIER	c.463-1541C>A c.463-1541C>A	CTSE	ENSG00000196188.12	transcript	ENST00000358184.7	protein_coding	4/8	chr1	206017671
chr1:206017674	G G	A A	1	a0007c0013t0001g0091 a0007c0013t0001g0091	1	HG02145.hp2 HG02145.hp2	intron_variant	MODIFIER	c.463-1544C>T c.463-1544C>T	CTSE	ENSG00000196188.12	transcript	ENST00000358184.7	protein_coding	4/8	chr1	206017674
chr1:206017698	C C	G G	1	a0001c0001t0006g0016 a0001c0001t0006g0016	3	HG02258.hp1 HG02280.hp1 HG02451.hp1 HG02258.hp1 HG02280.hp1 HG02451.hp1	intron_variant	MODIFIER	c.463-1568G>C c.463-1568G>C	CTSE	ENSG00000196188.12	transcript	ENST00000358184.7	protein_coding	4/8	chr1	206017698
chr1:206017823	A A	G G	2	a0001c0001t0002g0015 a0001c0001t0004g0010 a0001c0001t0002g0015 a0001c0001t0004g0010	8	HG01884.hp2 HG02055.hp1 HG02615.hp1 others(5): Show HG01884.hp2 HG02055.hp1 HG02615.hp1 HG02622.hp1 HG02896.hp1 HG02897.hp2 HG03540.hp2 HG03579.hp2	intron_variant	MODIFIER	c.463-1693T>C c.463-1693T>C	CTSE	ENSG00000196188.12	transcript	ENST00000358184.7	protein_coding	4/8	chr1	206017823
chr1:206018049	T T	C C	1	a0001c0001t0001g0090 a0001c0001t0001g0090	1	HG01943.hp1 HG01943.hp1	intron_variant	MODIFIER	c.463-1919A>G c.463-1919A>G	CTSE	ENSG00000196188.12	transcript	ENST00000358184.7	protein_coding	4/8	chr1	206018049
chr1:206018106	T T	C C	28	a0001c0002t0001g0003 a0001c0002t0001g0006 a0001c0002t0001g0020 others(25): Show a0001c0002t0001g0003 a0001c0002t0001g0006 a0001c0002t0001g0020 a0001c0002t0001g0026 a0001c0002t0001g0033 a0001c0002t0001g0035 a0001c0002t0001g0100 a0001c0002t0001g0101 a0001c0002t0001g0102 a0001c0002t0002g0024 a0001c0002t0002g0046 a0001c0002t0002g0049 a0001c0002t0002g0050 a0001c0002t0007g0094 a0001c0002t0007g0096 a0001c0002t0014g0048 a0001c0002t0022g0098 a0001c0012t0001g0099 a0001c0014t0007g0095 a0002c0004t0002g0007 a0002c0004t0002g0017 a0002c0004t0002g0053 a0002c0004t0009g0025 a0002c0005t0003g0013 a0002c0005t0016g0039 a0002c0010t0001g0103 a0002c0010t0002g0054 a0007c0013t0001g0091	61	HG00140.hp2 HG00423.hp2 HG00642.hp1 others(58): Show HG00140.hp2 HG00423.hp2 HG00642.hp1 HG01069.hp1 HG01070.hp1 HG01071.hp1 HG01071.hp2 HG01099.hp2 HG01192.hp2 HG01257.hp2 HG01258.hp1 HG01261.hp1 HG01346.hp1 HG01358.hp1 HG01361.hp1 HG01496.hp2 HG01516.hp1 HG01516.hp2 HG01517.hp2 HG02055.hp2 HG02145.hp2 HG02257.hp2 HG02258.hp2 HG02280.hp2 HG02300.hp2 HG02572.hp1 HG02572.hp2 HG02622.hp2 HG02630.hp2 HG02647.hp2 HG02723.hp2 HG02809.hp1 HG02818.hp2 HG02895.hp1 HG02896.hp2 HG02897.hp1 HG02922.hp2 HG02965.hp1 HG02965.hp2 HG02970.hp1 HG03017.hp2 HG03041.hp1 HG03139.hp1 HG03139.hp2 HG03195.hp1 HG03225.hp2 HG03453.hp1 HG03453.hp2 HG03471.hp1 HG03486.hp2 HG03516.hp1 HG06807.hp1 NA18522.hp1 NA19030.hp2 NA19043.hp1 NA19043.hp2 NA19240.hp1 NA19240.hp2 NA20129.hp1 NA20129.hp2 NA20300.hp1	intron_variant	MODIFIER	c.463-1976A>G c.463-1976A>G	CTSE	ENSG00000196188.12	transcript	ENST00000358184.7	protein_coding	4/8	chr1	206018106
chr1:206018145	C C	T T	1	a0002c0004t0002g0017 a0002c0004t0002g0017	3	HG01496.hp2 HG01516.hp1 HG01517.hp2 HG01496.hp2 HG01516.hp1 HG01517.hp2	intron_variant	MODIFIER	c.463-2015G>A c.463-2015G>A	CTSE	ENSG00000196188.12	transcript	ENST00000358184.7	protein_coding	4/8	chr1	206018145
chr1:206018182	G G	A A	1	a0001c0002t0007g0096 a0001c0002t0007g0096	1	HG02572.hp2 HG02572.hp2	intron_variant	MODIFIER	c.463-2052C>T c.463-2052C>T	CTSE	ENSG00000196188.12	transcript	ENST00000358184.7	protein_coding	4/8	chr1	206018182
chr1:206018287	A A	C C	22	a0001c0002t0001g0003 a0001c0002t0001g0020 a0001c0002t0001g0026 others(19): Show a0001c0002t0001g0003 a0001c0002t0001g0020 a0001c0002t0001g0026 a0001c0002t0001g0033 a0001c0002t0001g0035 a0001c0002t0001g0100 a0001c0002t0001g0101 a0001c0002t0001g0102 a0001c0002t0002g0024 a0001c0002t0002g0049 a0001c0002t0002g0050 a0001c0002t0014g0048 a0001c0002t0022g0098 a0001c0012t0001g0099 a0002c0004t0002g0007 a0002c0004t0002g0017 a0002c0004t0002g0053 a0002c0004t0009g0025 a0002c0005t0003g0013 a0002c0005t0016g0039 a0002c0010t0001g0103 a0002c0010t0002g0054	49	HG00140.hp2 HG00423.hp2 HG00642.hp1 others(46): Show HG00140.hp2 HG00423.hp2 HG00642.hp1 HG01069.hp1 HG01070.hp1 HG01071.hp1 HG01071.hp2 HG01099.hp2 HG01192.hp2 HG01257.hp2 HG01258.hp1 HG01261.hp1 HG01346.hp1 HG01358.hp1 HG01361.hp1 HG01496.hp2 HG01516.hp1 HG01516.hp2 HG01517.hp2 HG02258.hp2 HG02280.hp2 HG02300.hp2 HG02572.hp1 HG02622.hp2 HG02630.hp2 HG02723.hp2 HG02809.hp1 HG02818.hp2 HG02896.hp2 HG02965.hp2 HG02970.hp1 HG03017.hp2 HG03041.hp1 HG03139.hp1 HG03139.hp2 HG03195.hp1 HG03225.hp2 HG03453.hp1 HG03453.hp2 HG03471.hp1 HG03516.hp1 HG06807.hp1 NA18522.hp1 NA19030.hp2 NA19043.hp2 NA19240.hp1 NA20129.hp1 NA20129.hp2 NA20300.hp1	intron_variant	MODIFIER	c.463-2157T>G c.463-2157T>G	CTSE	ENSG00000196188.12	transcript	ENST00000358184.7	protein_coding	4/8	chr1	206018287
chr1:206018396	T T	C C	23	a0001c0001t0001g0104 a0001c0001t0002g0015 a0001c0001t0002g0041 others(20): Show a0001c0001t0001g0104 a0001c0001t0002g0015 a0001c0001t0002g0041 a0001c0001t0002g0052 a0001c0001t0003g0057 a0001c0001t0003g0069 a0001c0001t0004g0010 a0001c0001t0006g0016 a0001c0001t0008g0060 a0001c0001t0008g0105 a0001c0001t0010g0021 a0001c0001t0011g0055 a0001c0001t0012g0038 a0001c0001t0015g0045 a0001c0001t0017g0043 a0001c0001t0018g0056 a0001c0002t0001g0006 a0001c0002t0002g0040 a0001c0002t0002g0046 a0001c0002t0007g0094 a0001c0002t0007g0096 a0001c0007t0008g0068 a0001c0014t0007g0095	39	HG01109.hp1 HG01884.hp2 HG01891.hp1 others(36): Show HG01109.hp1 HG01884.hp2 HG01891.hp1 HG02055.hp1 HG02055.hp2 HG02109.hp1 HG02145.hp1 HG02257.hp2 HG02258.hp1 HG02280.hp1 HG02451.hp1 HG02451.hp2 HG02572.hp2 HG02615.hp1 HG02622.hp1 HG02647.hp2 HG02886.hp1 HG02895.hp1 HG02896.hp1 HG02897.hp1 HG02897.hp2 HG02922.hp2 HG02965.hp1 HG02976.hp1 HG02976.hp2 HG03098.hp1 HG03130.hp1 HG03130.hp2 HG03209.hp2 HG03486.hp2 HG03540.hp1 HG03540.hp2 HG03579.hp1 HG03579.hp2 NA18906.hp1 NA18975.hp1 NA19043.hp1 NA19240.hp2 NA21309.hp1	intron_variant	MODIFIER	c.463-2266A>G c.463-2266A>G	CTSE	ENSG00000196188.12	transcript	ENST00000358184.7	protein_coding	4/8	chr1	206018396
chr1:206018432	T T	C C	5	a0001c0001t0001g0104 a0001c0001t0002g0041 a0001c0001t0012g0038 others(2): Show a0001c0001t0001g0104 a0001c0001t0002g0041 a0001c0001t0012g0038 a0001c0001t0015g0045 a0001c0002t0002g0040	6	HG02109.hp1 HG02886.hp1 HG02976.hp2 others(3): Show HG02109.hp1 HG02886.hp1 HG02976.hp2 HG03130.hp1 HG03540.hp1 NA21309.hp1	intron_variant	MODIFIER	c.463-2302A>G c.463-2302A>G	CTSE	ENSG00000196188.12	transcript	ENST00000358184.7	protein_coding	4/8	chr1	206018432
chr1:206018463	T T	C C	1	a0001c0002t0001g0020 a0001c0002t0001g0020	3	HG00140.hp2 HG01261.hp1 HG02300.hp2 HG00140.hp2 HG01261.hp1 HG02300.hp2	intron_variant	MODIFIER	c.463-2333A>G c.463-2333A>G	CTSE	ENSG00000196188.12	transcript	ENST00000358184.7	protein_coding	4/8	chr1	206018463
chr1:206018520	G G	C C	1	a0001c0001t0001g0019 a0001c0001t0001g0019	3	HG00099.hp2 HG01069.hp2 homoSapiens_chm13v2.hp1 HG00099.hp2 HG01069.hp2 homoSapiens_chm13v2.hp1	intron_variant	MODIFIER	c.463-2390C>G c.463-2390C>G	CTSE	ENSG00000196188.12	transcript	ENST00000358184.7	protein_coding	4/8	chr1	206018520
chr1:206018616	T T	C C	7	a0001c0003t0002g0009 a0001c0003t0002g0022 a0001c0003t0002g0023 others(4): Show a0001c0003t0002g0009 a0001c0003t0002g0022 a0001c0003t0002g0023 a0001c0003t0002g0047 a0001c0003t0005g0011 a0001c0003t0013g0059 a0001c0003t0013g0097	16	HG01243.hp2 HG01884.hp1 HG01891.hp2 others(13): Show HG01243.hp2 HG01884.hp1 HG01891.hp2 HG02559.hp2 HG02647.hp1 HG02717.hp1 HG02723.hp1 HG02818.hp1 HG02895.hp2 HG02922.hp1 HG03098.hp2 HG03195.hp2 HG03225.hp1 HG03486.hp1 NA18522.hp2 NA18906.hp2	intron_variant	MODIFIER	c.462+2433A>G c.462+2433A>G	CTSE	ENSG00000196188.12	transcript	ENST00000358184.7	protein_coding	4/8	chr1	206018616
chr1:206018662	T T	C C	53	a0001c0001t0001g0104 a0001c0001t0002g0015 a0001c0001t0002g0041 others(50): Show a0001c0001t0001g0104 a0001c0001t0002g0015 a0001c0001t0002g0041 a0001c0001t0002g0052 a0001c0001t0003g0057 a0001c0001t0003g0069 a0001c0001t0004g0010 a0001c0001t0006g0016 a0001c0001t0008g0060 a0001c0001t0008g0105 a0001c0001t0010g0021 a0001c0001t0011g0055 a0001c0001t0012g0038 a0001c0001t0015g0045 a0001c0001t0017g0043 a0001c0001t0018g0056 a0001c0002t0001g0003 a0001c0002t0001g0006 a0001c0002t0001g0020 a0001c0002t0001g0026 a0001c0002t0001g0033 a0001c0002t0001g0035 a0001c0002t0001g0100 a0001c0002t0001g0101 a0001c0002t0001g0102 a0001c0002t0002g0024 a0001c0002t0002g0040 a0001c0002t0002g0046 a0001c0002t0002g0049 a0001c0002t0002g0050 a0001c0002t0007g0094 a0001c0002t0007g0096 a0001c0002t0014g0048 a0001c0002t0022g0098 a0001c0003t0002g0009 a0001c0003t0002g0022 a0001c0003t0002g0023 a0001c0003t0002g0047 a0001c0003t0005g0011 a0001c0003t0013g0059 a0001c0003t0013g0097 a0001c0007t0008g0068 a0001c0012t0001g0099 a0001c0014t0007g0095 a0002c0004t0002g0007 a0002c0004t0002g0017 a0002c0004t0002g0053 a0002c0004t0009g0025 a0002c0005t0003g0013 a0002c0005t0016g0039 a0002c0010t0001g0103 a0002c0010t0002g0054 a0007c0013t0001g0091	105	HG00140.hp2 HG00423.hp2 HG00642.hp1 others(102): Show HG00140.hp2 HG00423.hp2 HG00642.hp1 HG01069.hp1 HG01070.hp1 HG01071.hp1 HG01071.hp2 HG01099.hp2 HG01109.hp1 HG01192.hp2 HG01243.hp2 HG01257.hp2 HG01258.hp1 HG01261.hp1 HG01346.hp1 HG01358.hp1 HG01361.hp1 HG01496.hp2 HG01516.hp1 HG01516.hp2 HG01517.hp2 HG01884.hp1 HG01884.hp2 HG01891.hp1 HG01891.hp2 HG02055.hp1 HG02055.hp2 HG02109.hp1 HG02145.hp1 HG02145.hp2 HG02257.hp2 HG02258.hp1 HG02258.hp2 HG02280.hp1 HG02280.hp2 HG02300.hp2 HG02451.hp1 HG02451.hp2 HG02559.hp2 HG02572.hp1 HG02572.hp2 HG02615.hp1 HG02622.hp1 HG02622.hp2 HG02630.hp2 HG02647.hp1 HG02647.hp2 HG02717.hp1 HG02723.hp1 HG02723.hp2 HG02809.hp1 HG02818.hp1 HG02818.hp2 HG02886.hp1 HG02895.hp1 HG02895.hp2 HG02896.hp1 HG02896.hp2 HG02897.hp1 HG02897.hp2 HG02922.hp1 HG02922.hp2 HG02965.hp1 HG02965.hp2 HG02970.hp1 HG02976.hp1 HG02976.hp2 HG03017.hp2 HG03041.hp1 HG03098.hp1 HG03098.hp2 HG03130.hp1 HG03130.hp2 HG03139.hp1 HG03139.hp2 HG03195.hp1 HG03195.hp2 HG03209.hp2 HG03225.hp1 HG03225.hp2 HG03453.hp1 HG03453.hp2 HG03471.hp1 HG03486.hp1 HG03486.hp2 HG03516.hp1 HG03540.hp1 HG03540.hp2 HG03579.hp1 HG03579.hp2 HG06807.hp1 NA18522.hp1 NA18522.hp2 NA18906.hp1 NA18906.hp2 NA18975.hp1 NA19030.hp2 NA19043.hp1 NA19043.hp2 NA19240.hp1 NA19240.hp2 NA20129.hp1 NA20129.hp2 NA20300.hp1 NA21309.hp1	intron_variant	MODIFIER	c.462+2387A>G c.462+2387A>G	CTSE	ENSG00000196188.12	transcript	ENST00000358184.7	protein_coding	4/8	chr1	206018662
chr1:206018722	T T	C C	33	a0001c0001t0001g0002 a0001c0001t0001g0019 a0001c0001t0001g0027 others(30): Show a0001c0001t0001g0002 a0001c0001t0001g0019 a0001c0001t0001g0027 a0001c0001t0001g0032 a0001c0001t0001g0034 a0001c0001t0001g0070 a0001c0001t0001g0071 a0001c0001t0001g0073 a0001c0001t0001g0092 a0001c0001t0020g0072 a0001c0002t0001g0003 a0001c0002t0001g0020 a0001c0002t0001g0026 a0001c0002t0001g0033 a0001c0002t0001g0035 a0001c0002t0001g0100 a0001c0002t0001g0101 a0001c0002t0001g0102 a0001c0002t0002g0024 a0001c0002t0002g0049 a0001c0002t0002g0050 a0001c0002t0014g0048 a0001c0002t0022g0098 a0001c0012t0001g0099 a0002c0004t0002g0007 a0002c0004t0002g0017 a0002c0004t0002g0053 a0002c0004t0009g0025 a0002c0005t0003g0013 a0002c0005t0016g0039 a0002c0010t0001g0103 a0002c0010t0002g0054 a0004c0008t0001g0018	94	HG00099.hp1 HG00099.hp2 HG00140.hp2 others(91): Show HG00099.hp1 HG00099.hp2 HG00140.hp2 HG00423.hp1 HG00423.hp2 HG00438.hp1 HG00597.hp2 HG00639.hp2 HG00642.hp1 HG00733.hp1 HG00738.hp2 HG01069.hp1 HG01069.hp2 HG01070.hp1 HG01071.hp1 HG01071.hp2 HG01074.hp2 HG01099.hp2 HG01106.hp1 HG01175.hp1 HG01192.hp2 HG01257.hp2 HG01258.hp1 HG01261.hp1 HG01346.hp1 HG01358.hp1 HG01361.hp1 HG01361.hp2 HG01433.hp1 HG01496.hp2 HG01516.hp1 HG01516.hp2 HG01517.hp2 HG01978.hp1 HG01978.hp2 HG01981.hp1 HG01993.hp2 HG02027.hp2 HG02129.hp1 HG02135.hp2 HG02155.hp2 HG02165.hp2 HG02258.hp2 HG02280.hp2 HG02293.hp1 HG02300.hp2 HG02572.hp1 HG02622.hp2 HG02630.hp2 HG02723.hp2 HG02738.hp1 HG02809.hp1 HG02818.hp2 HG02896.hp2 HG02965.hp2 HG02970.hp1 HG03017.hp2 HG03041.hp1 HG03139.hp1 HG03139.hp2 HG03195.hp1 HG03225.hp2 HG03453.hp1 HG03453.hp2 HG03471.hp1 HG03516.hp1 HG03688.hp1 HG03834.hp1 HG03942.hp1 HG04204.hp1 HG04204.hp2 HG06807.hp1 NA18522.hp1 NA18612.hp1 NA18747.hp2 NA18943.hp1 NA18954.hp1 NA18959.hp2 NA18975.hp2 NA18990.hp1 NA19000.hp2 NA19005.hp2 NA19030.hp2 NA19043.hp2 NA19055.hp2 NA19090.hp2 NA19240.hp1 NA20129.hp1 NA20129.hp2 NA20300.hp1 NA20752.hp1 NA20805.hp1 NA20905.hp1 homoSapiens_chm13v2.hp1	intron_variant	MODIFIER	c.462+2327A>G c.462+2327A>G	CTSE	ENSG00000196188.12	transcript	ENST00000358184.7	protein_coding	4/8	chr1	206018722
chr1:206018796	A A	C C	1	a0001c0001t0018g0056 a0001c0001t0018g0056	1	NA18975.hp1 NA18975.hp1	intron_variant	MODIFIER	c.462+2253T>G c.462+2253T>G	CTSE	ENSG00000196188.12	transcript	ENST00000358184.7	protein_coding	4/8	chr1	206018796
chr1:206019026	G G	A A	21	a0001c0001t0001g0104 a0001c0001t0002g0015 a0001c0001t0002g0041 others(18): Show a0001c0001t0001g0104 a0001c0001t0002g0015 a0001c0001t0002g0041 a0001c0001t0002g0052 a0001c0001t0004g0010 a0001c0001t0006g0016 a0001c0001t0012g0038 a0001c0001t0015g0045 a0001c0002t0001g0006 a0001c0002t0002g0040 a0001c0002t0002g0046 a0001c0002t0007g0094 a0001c0002t0007g0096 a0001c0003t0002g0009 a0001c0003t0002g0022 a0001c0003t0002g0023 a0001c0003t0002g0047 a0001c0003t0005g0011 a0001c0003t0013g0059 a0001c0003t0013g0097 a0001c0014t0007g0095	45	HG01243.hp2 HG01884.hp1 HG01884.hp2 others(42): Show HG01243.hp2 HG01884.hp1 HG01884.hp2 HG01891.hp2 HG02055.hp1 HG02055.hp2 HG02109.hp1 HG02257.hp2 HG02258.hp1 HG02280.hp1 HG02451.hp1 HG02559.hp2 HG02572.hp2 HG02615.hp1 HG02622.hp1 HG02647.hp1 HG02647.hp2 HG02717.hp1 HG02723.hp1 HG02818.hp1 HG02886.hp1 HG02895.hp1 HG02895.hp2 HG02896.hp1 HG02897.hp1 HG02897.hp2 HG02922.hp1 HG02922.hp2 HG02965.hp1 HG02976.hp2 HG03098.hp1 HG03098.hp2 HG03130.hp1 HG03195.hp2 HG03225.hp1 HG03486.hp1 HG03486.hp2 HG03540.hp1 HG03540.hp2 HG03579.hp2 NA18522.hp2 NA18906.hp2 NA19043.hp1 NA19240.hp2 NA21309.hp1	intron_variant	MODIFIER	c.462+2023C>T c.462+2023C>T	CTSE	ENSG00000196188.12	transcript	ENST00000358184.7	protein_coding	4/8	chr1	206019026
chr1:206019150	C C	A A	3	a0001c0001t0008g0060 a0001c0001t0008g0105 a0001c0001t0011g0055 a0001c0001t0008g0060 a0001c0001t0008g0105 a0001c0001t0011g0055	3	HG01109.hp1 HG01891.hp1 HG03209.hp2 HG01109.hp1 HG01891.hp1 HG03209.hp2	intron_variant	MODIFIER	c.462+1899G>T c.462+1899G>T	CTSE	ENSG00000196188.12	transcript	ENST00000358184.7	protein_coding	4/8	chr1	206019150
chr1:206019192	T T	A A	1	a0001c0001t0004g0010 a0001c0001t0004g0010	5	HG02615.hp1 HG02622.hp1 HG02896.hp1 others(2): Show HG02615.hp1 HG02622.hp1 HG02896.hp1 HG02897.hp2 HG03579.hp2	intron_variant	MODIFIER	c.462+1857A>T c.462+1857A>T	CTSE	ENSG00000196188.12	transcript	ENST00000358184.7	protein_coding	4/8	chr1	206019192
chr1:206019361	C C	T T	1	a0001c0001t0001g0028 a0001c0001t0001g0028	2	NA18978.hp1 NA19065.hp2 NA18978.hp1 NA19065.hp2	intron_variant	MODIFIER	c.462+1688G>A c.462+1688G>A	CTSE	ENSG00000196188.12	transcript	ENST00000358184.7	protein_coding	4/8	chr1	206019361
chr1:206019436	G G	A A	1	a0001c0001t0001g0058 a0001c0001t0001g0058	1	HG02886.hp2 HG02886.hp2	intron_variant	MODIFIER	c.462+1613C>T c.462+1613C>T	CTSE	ENSG00000196188.12	transcript	ENST00000358184.7	protein_coding	4/8	chr1	206019436
chr1:206019451	A A	C C	1	a0001c0001t0001g0074 a0001c0001t0001g0074	1	NA18747.hp1 NA18747.hp1	intron_variant	MODIFIER	c.462+1598T>G c.462+1598T>G	CTSE	ENSG00000196188.12	transcript	ENST00000358184.7	protein_coding	4/8	chr1	206019451
chr1:206019466	G G	A A	5	a0001c0001t0003g0057 a0001c0001t0003g0069 a0001c0001t0010g0021 others(2): Show a0001c0001t0003g0057 a0001c0001t0003g0069 a0001c0001t0010g0021 a0001c0001t0017g0043 a0001c0007t0008g0068	6	HG02145.hp1 HG02451.hp2 HG02976.hp1 others(3): Show HG02145.hp1 HG02451.hp2 HG02976.hp1 HG03130.hp2 HG03579.hp1 NA18906.hp1	intron_variant	MODIFIER	c.462+1583C>T c.462+1583C>T	CTSE	ENSG00000196188.12	transcript	ENST00000358184.7	protein_coding	4/8	chr1	206019466
chr1:206019638	T T	G G	1	a0001c0001t0001g0070 a0001c0001t0001g0070	1	NA20905.hp1 NA20905.hp1	intron_variant	MODIFIER	c.462+1411A>C c.462+1411A>C	CTSE	ENSG00000196188.12	transcript	ENST00000358184.7	protein_coding	4/8	chr1	206019638
chr1:206019647	T T	A A	1	a0001c0001t0001g0070 a0001c0001t0001g0070	1	NA20905.hp1 NA20905.hp1	intron_variant	MODIFIER	c.462+1402A>T c.462+1402A>T	CTSE	ENSG00000196188.12	transcript	ENST00000358184.7	protein_coding	4/8	chr1	206019647
chr1:206019650	C C	G G	1	a0001c0001t0001g0070 a0001c0001t0001g0070	1	NA20905.hp1 NA20905.hp1	intron_variant	MODIFIER	c.462+1399G>C c.462+1399G>C	CTSE	ENSG00000196188.12	transcript	ENST00000358184.7	protein_coding	4/8	chr1	206019650
chr1:206019651	C C	A A	1	a0001c0001t0001g0070 a0001c0001t0001g0070	1	NA20905.hp1 NA20905.hp1	intron_variant	MODIFIER	c.462+1398G>T c.462+1398G>T	CTSE	ENSG00000196188.12	transcript	ENST00000358184.7	protein_coding	4/8	chr1	206019651
chr1:206019654	C C	T T	1	a0001c0001t0001g0070 a0001c0001t0001g0070	1	NA20905.hp1 NA20905.hp1	intron_variant	MODIFIER	c.462+1395G>A c.462+1395G>A	CTSE	ENSG00000196188.12	transcript	ENST00000358184.7	protein_coding	4/8	chr1	206019654
chr1:206019657	A A	G G	1	a0001c0001t0001g0070 a0001c0001t0001g0070	1	NA20905.hp1 NA20905.hp1	intron_variant	MODIFIER	c.462+1392T>C c.462+1392T>C	CTSE	ENSG00000196188.12	transcript	ENST00000358184.7	protein_coding	4/8	chr1	206019657
chr1:206019658	A A	T T	1	a0001c0001t0001g0070 a0001c0001t0001g0070	1	NA20905.hp1 NA20905.hp1	intron_variant	MODIFIER	c.462+1391T>A c.462+1391T>A	CTSE	ENSG00000196188.12	transcript	ENST00000358184.7	protein_coding	4/8	chr1	206019658
chr1:206019659	T T	G G	1	a0001c0001t0001g0070 a0001c0001t0001g0070	1	NA20905.hp1 NA20905.hp1	intron_variant	MODIFIER	c.462+1390A>C c.462+1390A>C	CTSE	ENSG00000196188.12	transcript	ENST00000358184.7	protein_coding	4/8	chr1	206019659
chr1:206019660	A A	G G	1	a0001c0001t0001g0070 a0001c0001t0001g0070	1	NA20905.hp1 NA20905.hp1	intron_variant	MODIFIER	c.462+1389T>C c.462+1389T>C	CTSE	ENSG00000196188.12	transcript	ENST00000358184.7	protein_coding	4/8	chr1	206019660
chr1:206019661	G G	A A	1	a0001c0001t0001g0070 a0001c0001t0001g0070	1	NA20905.hp1 NA20905.hp1	intron_variant	MODIFIER	c.462+1388C>T c.462+1388C>T	CTSE	ENSG00000196188.12	transcript	ENST00000358184.7	protein_coding	4/8	chr1	206019661
chr1:206019663	C C	G G	1	a0001c0001t0001g0070 a0001c0001t0001g0070	1	NA20905.hp1 NA20905.hp1	intron_variant	MODIFIER	c.462+1386G>C c.462+1386G>C	CTSE	ENSG00000196188.12	transcript	ENST00000358184.7	protein_coding	4/8	chr1	206019663
chr1:206019664	A A	G G	1	a0001c0001t0001g0070 a0001c0001t0001g0070	1	NA20905.hp1 NA20905.hp1	intron_variant	MODIFIER	c.462+1385T>C c.462+1385T>C	CTSE	ENSG00000196188.12	transcript	ENST00000358184.7	protein_coding	4/8	chr1	206019664
chr1:206019665	T T	G G	1	a0001c0001t0001g0070 a0001c0001t0001g0070	1	NA20905.hp1 NA20905.hp1	intron_variant	MODIFIER	c.462+1384A>C c.462+1384A>C	CTSE	ENSG00000196188.12	transcript	ENST00000358184.7	protein_coding	4/8	chr1	206019665
chr1:206019668	T T	C C	1	a0001c0001t0001g0070 a0001c0001t0001g0070	1	NA20905.hp1 NA20905.hp1	intron_variant	MODIFIER	c.462+1381A>G c.462+1381A>G	CTSE	ENSG00000196188.12	transcript	ENST00000358184.7	protein_coding	4/8	chr1	206019668
chr1:206019670	A A	T T	1	a0001c0001t0001g0070 a0001c0001t0001g0070	1	NA20905.hp1 NA20905.hp1	intron_variant	MODIFIER	c.462+1379T>A c.462+1379T>A	CTSE	ENSG00000196188.12	transcript	ENST00000358184.7	protein_coding	4/8	chr1	206019670
chr1:206019672	T T	G G	1	a0001c0001t0001g0070 a0001c0001t0001g0070	1	NA20905.hp1 NA20905.hp1	intron_variant	MODIFIER	c.462+1377A>C c.462+1377A>C	CTSE	ENSG00000196188.12	transcript	ENST00000358184.7	protein_coding	4/8	chr1	206019672
chr1:206019674	T T	G G	1	a0001c0001t0001g0070 a0001c0001t0001g0070	1	NA20905.hp1 NA20905.hp1	intron_variant	MODIFIER	c.462+1375A>C c.462+1375A>C	CTSE	ENSG00000196188.12	transcript	ENST00000358184.7	protein_coding	4/8	chr1	206019674
chr1:206019677	T T	G G	1	a0001c0001t0001g0070 a0001c0001t0001g0070	1	NA20905.hp1 NA20905.hp1	intron_variant	MODIFIER	c.462+1372A>C c.462+1372A>C	CTSE	ENSG00000196188.12	transcript	ENST00000358184.7	protein_coding	4/8	chr1	206019677
chr1:206019679	T T	G G	1	a0001c0001t0001g0070 a0001c0001t0001g0070	1	NA20905.hp1 NA20905.hp1	intron_variant	MODIFIER	c.462+1370A>C c.462+1370A>C	CTSE	ENSG00000196188.12	transcript	ENST00000358184.7	protein_coding	4/8	chr1	206019679
chr1:206019680	A A	G G	1	a0001c0001t0001g0070 a0001c0001t0001g0070	1	NA20905.hp1 NA20905.hp1	intron_variant	MODIFIER	c.462+1369T>C c.462+1369T>C	CTSE	ENSG00000196188.12	transcript	ENST00000358184.7	protein_coding	4/8	chr1	206019680
chr1:206019684	A A	G G	1	a0001c0001t0001g0070 a0001c0001t0001g0070	1	NA20905.hp1 NA20905.hp1	intron_variant	MODIFIER	c.462+1365T>C c.462+1365T>C	CTSE	ENSG00000196188.12	transcript	ENST00000358184.7	protein_coding	4/8	chr1	206019684
chr1:206019685	T T	G G	1	a0001c0001t0001g0070 a0001c0001t0001g0070	1	NA20905.hp1 NA20905.hp1	intron_variant	MODIFIER	c.462+1364A>C c.462+1364A>C	CTSE	ENSG00000196188.12	transcript	ENST00000358184.7	protein_coding	4/8	chr1	206019685
chr1:206019688	T T	C C	3	a0001c0001t0008g0060 a0001c0001t0008g0105 a0001c0001t0011g0055 a0001c0001t0008g0060 a0001c0001t0008g0105 a0001c0001t0011g0055	3	HG01109.hp1 HG01891.hp1 HG03209.hp2 HG01109.hp1 HG01891.hp1 HG03209.hp2	intron_variant	MODIFIER	c.462+1361A>G c.462+1361A>G	CTSE	ENSG00000196188.12	transcript	ENST00000358184.7	protein_coding	4/8	chr1	206019688
chr1:206019697	A A	T T	1	a0001c0001t0001g0070 a0001c0001t0001g0070	1	NA20905.hp1 NA20905.hp1	intron_variant	MODIFIER	c.462+1352T>A c.462+1352T>A	CTSE	ENSG00000196188.12	transcript	ENST00000358184.7	protein_coding	4/8	chr1	206019697
chr1:206019702	T T	G G	1	a0001c0001t0001g0070 a0001c0001t0001g0070	1	NA20905.hp1 NA20905.hp1	intron_variant	MODIFIER	c.462+1347A>C c.462+1347A>C	CTSE	ENSG00000196188.12	transcript	ENST00000358184.7	protein_coding	4/8	chr1	206019702
chr1:206019703	A A	T T	1	a0001c0001t0001g0070 a0001c0001t0001g0070	1	NA20905.hp1 NA20905.hp1	intron_variant	MODIFIER	c.462+1346T>A c.462+1346T>A	CTSE	ENSG00000196188.12	transcript	ENST00000358184.7	protein_coding	4/8	chr1	206019703
chr1:206019704	T T	A A	1	a0001c0001t0001g0070 a0001c0001t0001g0070	1	NA20905.hp1 NA20905.hp1	intron_variant	MODIFIER	c.462+1345A>T c.462+1345A>T	CTSE	ENSG00000196188.12	transcript	ENST00000358184.7	protein_coding	4/8	chr1	206019704
chr1:206019705	A A	G G	1	a0001c0001t0001g0070 a0001c0001t0001g0070	1	NA20905.hp1 NA20905.hp1	intron_variant	MODIFIER	c.462+1344T>C c.462+1344T>C	CTSE	ENSG00000196188.12	transcript	ENST00000358184.7	protein_coding	4/8	chr1	206019705
chr1:206019708	A A	G G	1	a0001c0001t0001g0070 a0001c0001t0001g0070	1	NA20905.hp1 NA20905.hp1	intron_variant	MODIFIER	c.462+1341T>C c.462+1341T>C	CTSE	ENSG00000196188.12	transcript	ENST00000358184.7	protein_coding	4/8	chr1	206019708
chr1:206019716	A A	G G	1	a0001c0001t0001g0070 a0001c0001t0001g0070	1	NA20905.hp1 NA20905.hp1	intron_variant	MODIFIER	c.462+1333T>C c.462+1333T>C	CTSE	ENSG00000196188.12	transcript	ENST00000358184.7	protein_coding	4/8	chr1	206019716
chr1:206019718	A A	G G	1	a0001c0001t0001g0070 a0001c0001t0001g0070	1	NA20905.hp1 NA20905.hp1	intron_variant	MODIFIER	c.462+1331T>C c.462+1331T>C	CTSE	ENSG00000196188.12	transcript	ENST00000358184.7	protein_coding	4/8	chr1	206019718
chr1:206019722	C C	A A	1	a0001c0001t0001g0070 a0001c0001t0001g0070	1	NA20905.hp1 NA20905.hp1	intron_variant	MODIFIER	c.462+1327G>T c.462+1327G>T	CTSE	ENSG00000196188.12	transcript	ENST00000358184.7	protein_coding	4/8	chr1	206019722
chr1:206019723	A A	T T	1	a0001c0001t0001g0070 a0001c0001t0001g0070	1	NA20905.hp1 NA20905.hp1	intron_variant	MODIFIER	c.462+1326T>A c.462+1326T>A	CTSE	ENSG00000196188.12	transcript	ENST00000358184.7	protein_coding	4/8	chr1	206019723
chr1:206019724	T T	G G	1	a0001c0001t0001g0070 a0001c0001t0001g0070	1	NA20905.hp1 NA20905.hp1	intron_variant	MODIFIER	c.462+1325A>C c.462+1325A>C	CTSE	ENSG00000196188.12	transcript	ENST00000358184.7	protein_coding	4/8	chr1	206019724
chr1:206019726	A A	C C	1	a0001c0001t0001g0070 a0001c0001t0001g0070	1	NA20905.hp1 NA20905.hp1	intron_variant	MODIFIER	c.462+1323T>G c.462+1323T>G	CTSE	ENSG00000196188.12	transcript	ENST00000358184.7	protein_coding	4/8	chr1	206019726
chr1:206019732	A A	G G	1	a0001c0001t0001g0070 a0001c0001t0001g0070	1	NA20905.hp1 NA20905.hp1	intron_variant	MODIFIER	c.462+1317T>C c.462+1317T>C	CTSE	ENSG00000196188.12	transcript	ENST00000358184.7	protein_coding	4/8	chr1	206019732
chr1:206019743	T T	C C	7	a0001c0003t0002g0009 a0001c0003t0002g0022 a0001c0003t0002g0023 others(4): Show a0001c0003t0002g0009 a0001c0003t0002g0022 a0001c0003t0002g0023 a0001c0003t0002g0047 a0001c0003t0005g0011 a0001c0003t0013g0059 a0001c0003t0013g0097	16	HG01243.hp2 HG01884.hp1 HG01891.hp2 others(13): Show HG01243.hp2 HG01884.hp1 HG01891.hp2 HG02559.hp2 HG02647.hp1 HG02717.hp1 HG02723.hp1 HG02818.hp1 HG02895.hp2 HG02922.hp1 HG03098.hp2 HG03195.hp2 HG03225.hp1 HG03486.hp1 NA18522.hp2 NA18906.hp2	intron_variant	MODIFIER	c.462+1306A>G c.462+1306A>G	CTSE	ENSG00000196188.12	transcript	ENST00000358184.7	protein_coding	4/8	chr1	206019743
chr1:206019744	A A	G G	1	a0001c0001t0001g0070 a0001c0001t0001g0070	1	NA20905.hp1 NA20905.hp1	intron_variant	MODIFIER	c.462+1305T>C c.462+1305T>C	CTSE	ENSG00000196188.12	transcript	ENST00000358184.7	protein_coding	4/8	chr1	206019744
chr1:206019749	ACATAATA others(3): Show ACATAATATAT	A A	1	a0001c0001t0001g0070 a0001c0001t0001g0070	1	NA20905.hp1 NA20905.hp1	intron_variant	MODIFIER	c.462+1290_462+1299d others(12): Show c.462+1290_462+1299delATATATTATG	CTSE	ENSG00000196188.12	transcript	ENST00000358184.7	protein_coding	4/8	chr1	206019749
chr1:206019759	T T	A A	1	a0001c0002t0002g0050 a0001c0002t0002g0050	1	HG03195.hp1 HG03195.hp1	intron_variant	MODIFIER	c.462+1290A>T c.462+1290A>T	CTSE	ENSG00000196188.12	transcript	ENST00000358184.7	protein_coding	4/8	chr1	206019759
chr1:206019761	C C	G G	1	a0001c0001t0001g0070 a0001c0001t0001g0070	1	NA20905.hp1 NA20905.hp1	intron_variant	MODIFIER	c.462+1288G>C c.462+1288G>C	CTSE	ENSG00000196188.12	transcript	ENST00000358184.7	protein_coding	4/8	chr1	206019761
chr1:206019762	A A	G G	1	a0001c0001t0001g0070 a0001c0001t0001g0070	1	NA20905.hp1 NA20905.hp1	intron_variant	MODIFIER	c.462+1287T>C c.462+1287T>C	CTSE	ENSG00000196188.12	transcript	ENST00000358184.7	protein_coding	4/8	chr1	206019762
chr1:206019763	C C	T T	1	a0001c0001t0001g0070 a0001c0001t0001g0070	1	NA20905.hp1 NA20905.hp1	intron_variant	MODIFIER	c.462+1286G>A c.462+1286G>A	CTSE	ENSG00000196188.12	transcript	ENST00000358184.7	protein_coding	4/8	chr1	206019763
chr1:206019766	T T	G G	1	a0001c0001t0001g0070 a0001c0001t0001g0070	1	NA20905.hp1 NA20905.hp1	intron_variant	MODIFIER	c.462+1283A>C c.462+1283A>C	CTSE	ENSG00000196188.12	transcript	ENST00000358184.7	protein_coding	4/8	chr1	206019766
chr1:206019769	A A	T T	1	a0001c0001t0001g0070 a0001c0001t0001g0070	1	NA20905.hp1 NA20905.hp1	intron_variant	MODIFIER	c.462+1280T>A c.462+1280T>A	CTSE	ENSG00000196188.12	transcript	ENST00000358184.7	protein_coding	4/8	chr1	206019769
chr1:206019770	T T	G G	1	a0001c0001t0001g0070 a0001c0001t0001g0070	1	NA20905.hp1 NA20905.hp1	intron_variant	MODIFIER	c.462+1279A>C c.462+1279A>C	CTSE	ENSG00000196188.12	transcript	ENST00000358184.7	protein_coding	4/8	chr1	206019770
chr1:206019778	G G	T T	9	a0001c0001t0001g0002 a0001c0001t0001g0019 a0001c0001t0001g0027 others(6): Show a0001c0001t0001g0002 a0001c0001t0001g0019 a0001c0001t0001g0027 a0001c0001t0001g0034 a0001c0001t0001g0070 a0001c0001t0001g0071 a0001c0001t0001g0073 a0001c0001t0020g0072 a0004c0008t0001g0018	42	HG00099.hp1 HG00099.hp2 HG00423.hp1 others(39): Show HG00099.hp1 HG00099.hp2 HG00423.hp1 HG00438.hp1 HG00597.hp2 HG00639.hp2 HG00733.hp1 HG00738.hp2 HG01069.hp2 HG01074.hp2 HG01106.hp1 HG01361.hp2 HG01433.hp1 HG01978.hp1 HG01978.hp2 HG01981.hp1 HG01993.hp2 HG02027.hp2 HG02129.hp1 HG02135.hp2 HG02155.hp2 HG02165.hp2 HG02293.hp1 HG02738.hp1 HG03688.hp1 HG03834.hp1 HG04204.hp1 HG04204.hp2 NA18612.hp1 NA18747.hp2 NA18943.hp1 NA18954.hp1 NA18959.hp2 NA18975.hp2 NA18990.hp1 NA19000.hp2 NA19005.hp2 NA19055.hp2 NA20752.hp1 NA20805.hp1 NA20905.hp1 homoSapiens_chm13v2.hp1	intron_variant	MODIFIER	c.462+1271C>A c.462+1271C>A	CTSE	ENSG00000196188.12	transcript	ENST00000358184.7	protein_coding	4/8	chr1	206019778
chr1:206019797	T T	G G	1	a0001c0001t0001g0070 a0001c0001t0001g0070	1	NA20905.hp1 NA20905.hp1	intron_variant	MODIFIER	c.462+1252A>C c.462+1252A>C	CTSE	ENSG00000196188.12	transcript	ENST00000358184.7	protein_coding	4/8	chr1	206019797
chr1:206019800	A A	G G	1	a0001c0001t0001g0070 a0001c0001t0001g0070	1	NA20905.hp1 NA20905.hp1	intron_variant	MODIFIER	c.462+1249T>C c.462+1249T>C	CTSE	ENSG00000196188.12	transcript	ENST00000358184.7	protein_coding	4/8	chr1	206019800
chr1:206019806	A A	T T	1	a0001c0001t0001g0070 a0001c0001t0001g0070	1	NA20905.hp1 NA20905.hp1	intron_variant	MODIFIER	c.462+1243T>A c.462+1243T>A	CTSE	ENSG00000196188.12	transcript	ENST00000358184.7	protein_coding	4/8	chr1	206019806
chr1:206019807	T T	G G	1	a0001c0001t0001g0070 a0001c0001t0001g0070	1	NA20905.hp1 NA20905.hp1	intron_variant	MODIFIER	c.462+1242A>C c.462+1242A>C	CTSE	ENSG00000196188.12	transcript	ENST00000358184.7	protein_coding	4/8	chr1	206019807
chr1:206019809	T T	G G	1	a0001c0001t0001g0070 a0001c0001t0001g0070	1	NA20905.hp1 NA20905.hp1	intron_variant	MODIFIER	c.462+1240A>C c.462+1240A>C	CTSE	ENSG00000196188.12	transcript	ENST00000358184.7	protein_coding	4/8	chr1	206019809
chr1:206019814	T T	G G	1	a0001c0001t0001g0070 a0001c0001t0001g0070	1	NA20905.hp1 NA20905.hp1	intron_variant	MODIFIER	c.462+1235A>C c.462+1235A>C	CTSE	ENSG00000196188.12	transcript	ENST00000358184.7	protein_coding	4/8	chr1	206019814
chr1:206019821	T T	G G	1	a0001c0001t0001g0070 a0001c0001t0001g0070	1	NA20905.hp1 NA20905.hp1	intron_variant	MODIFIER	c.462+1228A>C c.462+1228A>C	CTSE	ENSG00000196188.12	transcript	ENST00000358184.7	protein_coding	4/8	chr1	206019821
chr1:206019823	A A	G G	1	a0001c0001t0001g0070 a0001c0001t0001g0070	1	NA20905.hp1 NA20905.hp1	intron_variant	MODIFIER	c.462+1226T>C c.462+1226T>C	CTSE	ENSG00000196188.12	transcript	ENST00000358184.7	protein_coding	4/8	chr1	206019823
chr1:206019826	T T	G G	1	a0001c0001t0001g0070 a0001c0001t0001g0070	1	NA20905.hp1 NA20905.hp1	intron_variant	MODIFIER	c.462+1223A>C c.462+1223A>C	CTSE	ENSG00000196188.12	transcript	ENST00000358184.7	protein_coding	4/8	chr1	206019826
chr1:206019838	A A	G G	1	a0001c0001t0001g0070 a0001c0001t0001g0070	1	NA20905.hp1 NA20905.hp1	intron_variant	MODIFIER	c.462+1211T>C c.462+1211T>C	CTSE	ENSG00000196188.12	transcript	ENST00000358184.7	protein_coding	4/8	chr1	206019838
chr1:206019840	A A	G G	1	a0001c0001t0001g0070 a0001c0001t0001g0070	1	NA20905.hp1 NA20905.hp1	intron_variant	MODIFIER	c.462+1209T>C c.462+1209T>C	CTSE	ENSG00000196188.12	transcript	ENST00000358184.7	protein_coding	4/8	chr1	206019840
chr1:206019841	A A	G G	1	a0001c0001t0001g0070 a0001c0001t0001g0070	1	NA20905.hp1 NA20905.hp1	intron_variant	MODIFIER	c.462+1208T>C c.462+1208T>C	CTSE	ENSG00000196188.12	transcript	ENST00000358184.7	protein_coding	4/8	chr1	206019841
chr1:206019850	T T	G G	1	a0001c0001t0001g0070 a0001c0001t0001g0070	1	NA20905.hp1 NA20905.hp1	intron_variant	MODIFIER	c.462+1199A>C c.462+1199A>C	CTSE	ENSG00000196188.12	transcript	ENST00000358184.7	protein_coding	4/8	chr1	206019850
chr1:206019856	A A	G G	1	a0001c0001t0001g0070 a0001c0001t0001g0070	1	NA20905.hp1 NA20905.hp1	intron_variant	MODIFIER	c.462+1193T>C c.462+1193T>C	CTSE	ENSG00000196188.12	transcript	ENST00000358184.7	protein_coding	4/8	chr1	206019856
chr1:206019875	T T	C C	22	a0001c0002t0001g0003 a0001c0002t0001g0020 a0001c0002t0001g0026 others(19): Show a0001c0002t0001g0003 a0001c0002t0001g0020 a0001c0002t0001g0026 a0001c0002t0001g0033 a0001c0002t0001g0035 a0001c0002t0001g0100 a0001c0002t0001g0101 a0001c0002t0001g0102 a0001c0002t0002g0024 a0001c0002t0002g0049 a0001c0002t0002g0050 a0001c0002t0014g0048 a0001c0002t0022g0098 a0001c0012t0001g0099 a0002c0004t0002g0007 a0002c0004t0002g0017 a0002c0004t0002g0053 a0002c0004t0009g0025 a0002c0005t0003g0013 a0002c0005t0016g0039 a0002c0010t0001g0103 a0002c0010t0002g0054	49	HG00140.hp2 HG00423.hp2 HG00642.hp1 others(46): Show HG00140.hp2 HG00423.hp2 HG00642.hp1 HG01069.hp1 HG01070.hp1 HG01071.hp1 HG01071.hp2 HG01099.hp2 HG01192.hp2 HG01257.hp2 HG01258.hp1 HG01261.hp1 HG01346.hp1 HG01358.hp1 HG01361.hp1 HG01496.hp2 HG01516.hp1 HG01516.hp2 HG01517.hp2 HG02258.hp2 HG02280.hp2 HG02300.hp2 HG02572.hp1 HG02622.hp2 HG02630.hp2 HG02723.hp2 HG02809.hp1 HG02818.hp2 HG02896.hp2 HG02965.hp2 HG02970.hp1 HG03017.hp2 HG03041.hp1 HG03139.hp1 HG03139.hp2 HG03195.hp1 HG03225.hp2 HG03453.hp1 HG03453.hp2 HG03471.hp1 HG03516.hp1 HG06807.hp1 NA18522.hp1 NA19030.hp2 NA19043.hp2 NA19240.hp1 NA20129.hp1 NA20129.hp2 NA20300.hp1	intron_variant	MODIFIER	c.462+1174A>G c.462+1174A>G	CTSE	ENSG00000196188.12	transcript	ENST00000358184.7	protein_coding	4/8	chr1	206019875
chr1:206019975	T T	C C	1	a0001c0001t0001g0034 a0001c0001t0001g0034	2	HG02738.hp1 HG04204.hp1 HG02738.hp1 HG04204.hp1	intron_variant	MODIFIER	c.462+1074A>G c.462+1074A>G	CTSE	ENSG00000196188.12	transcript	ENST00000358184.7	protein_coding	4/8	chr1	206019975
chr1:206019997	A A	G G	9	a0001c0001t0003g0057 a0001c0001t0003g0069 a0001c0001t0008g0060 others(6): Show a0001c0001t0003g0057 a0001c0001t0003g0069 a0001c0001t0008g0060 a0001c0001t0008g0105 a0001c0001t0010g0021 a0001c0001t0011g0055 a0001c0001t0017g0043 a0001c0001t0018g0056 a0001c0007t0008g0068	10	HG01109.hp1 HG01891.hp1 HG02145.hp1 others(7): Show HG01109.hp1 HG01891.hp1 HG02145.hp1 HG02451.hp2 HG02976.hp1 HG03130.hp2 HG03209.hp2 HG03579.hp1 NA18906.hp1 NA18975.hp1	intron_variant	MODIFIER	c.462+1052T>C c.462+1052T>C	CTSE	ENSG00000196188.12	transcript	ENST00000358184.7	protein_coding	4/8	chr1	206019997
chr1:206020188	A A	G G	1	a0002c0010t0001g0103 a0002c0010t0001g0103	1	HG02630.hp2 HG02630.hp2	intron_variant	MODIFIER	c.462+861T>C c.462+861T>C	CTSE	ENSG00000196188.12	transcript	ENST00000358184.7	protein_coding	4/8	chr1	206020188
chr1:206020217	C C	T T	1	a0001c0001t0006g0016 a0001c0001t0006g0016	3	HG02258.hp1 HG02280.hp1 HG02451.hp1 HG02258.hp1 HG02280.hp1 HG02451.hp1	intron_variant	MODIFIER	c.462+832G>A c.462+832G>A	CTSE	ENSG00000196188.12	transcript	ENST00000358184.7	protein_coding	4/8	chr1	206020217
chr1:206020243	C C	T T	1	a0001c0001t0001g0067 a0001c0001t0001g0067	1	HG02738.hp2 HG02738.hp2	intron_variant	MODIFIER	c.462+806G>A c.462+806G>A	CTSE	ENSG00000196188.12	transcript	ENST00000358184.7	protein_coding	4/8	chr1	206020243
chr1:206020331	C C	T T	3	a0001c0001t0008g0060 a0001c0001t0008g0105 a0001c0001t0011g0055 a0001c0001t0008g0060 a0001c0001t0008g0105 a0001c0001t0011g0055	3	HG01109.hp1 HG01891.hp1 HG03209.hp2 HG01109.hp1 HG01891.hp1 HG03209.hp2	intron_variant	MODIFIER	c.462+718G>A c.462+718G>A	CTSE	ENSG00000196188.12	transcript	ENST00000358184.7	protein_coding	4/8	chr1	206020331
chr1:206020339	C C	G G	1	a0001c0001t0001g0066 a0001c0001t0001g0066	1	HG06807.hp2 HG06807.hp2	intron_variant	MODIFIER	c.462+710G>C c.462+710G>C	CTSE	ENSG00000196188.12	transcript	ENST00000358184.7	protein_coding	4/8	chr1	206020339
chr1:206020387	C C	T T	1	a0002c0004t0002g0053 a0002c0004t0002g0053	1	HG02809.hp1 HG02809.hp1	intron_variant	MODIFIER	c.462+662G>A c.462+662G>A	CTSE	ENSG00000196188.12	transcript	ENST00000358184.7	protein_coding	4/8	chr1	206020387
chr1:206020389	G G	T T	106	a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0004 others(103): Show a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0004 a0001c0001t0001g0005 a0001c0001t0001g0008 a0001c0001t0001g0014 a0001c0001t0001g0019 a0001c0001t0001g0027 a0001c0001t0001g0028 a0001c0001t0001g0029 a0001c0001t0001g0030 a0001c0001t0001g0031 a0001c0001t0001g0032 a0001c0001t0001g0034 a0001c0001t0001g0036 a0001c0001t0001g0037 a0001c0001t0001g0058 a0001c0001t0001g0061 a0001c0001t0001g0062 a0001c0001t0001g0063 a0001c0001t0001g0064 a0001c0001t0001g0065 a0001c0001t0001g0066 a0001c0001t0001g0067 a0001c0001t0001g0070 a0001c0001t0001g0071 a0001c0001t0001g0073 a0001c0001t0001g0074 a0001c0001t0001g0075 a0001c0001t0001g0076 a0001c0001t0001g0078 a0001c0001t0001g0079 a0001c0001t0001g0080 a0001c0001t0001g0083 a0001c0001t0001g0086 a0001c0001t0001g0088 a0001c0001t0001g0089 a0001c0001t0001g0090 a0001c0001t0001g0092 a0001c0001t0001g0104 a0001c0001t0001g0106 a0001c0001t0001g0107 a0001c0001t0002g0015 a0001c0001t0002g0041 a0001c0001t0002g0044 a0001c0001t0002g0052 a0001c0001t0003g0057 a0001c0001t0003g0069 a0001c0001t0004g0010 a0001c0001t0006g0016 a0001c0001t0008g0060 a0001c0001t0008g0105 a0001c0001t0010g0021 a0001c0001t0011g0055 a0001c0001t0012g0038 a0001c0001t0015g0045 a0001c0001t0017g0043 a0001c0001t0018g0056 a0001c0001t0019g0087 a0001c0001t0020g0072 a0001c0002t0001g0003 a0001c0002t0001g0006 a0001c0002t0001g0020 a0001c0002t0001g0026 a0001c0002t0001g0033 a0001c0002t0001g0035 a0001c0002t0001g0100 a0001c0002t0001g0101 a0001c0002t0001g0102 a0001c0002t0002g0024 a0001c0002t0002g0040 a0001c0002t0002g0046 a0001c0002t0002g0049 a0001c0002t0002g0050 a0001c0002t0007g0094 a0001c0002t0007g0096 a0001c0002t0014g0048 a0001c0002t0022g0098 a0001c0003t0002g0009 a0001c0003t0002g0022 a0001c0003t0002g0023 a0001c0003t0002g0047 a0001c0003t0005g0011 a0001c0003t0013g0059 a0001c0003t0013g0097 a0001c0007t0008g0068 a0001c0007t0011g0051 a0001c0007t0021g0077 a0001c0012t0001g0099 a0001c0014t0007g0095 a0002c0004t0002g0007 a0002c0004t0002g0017 a0002c0004t0002g0053 a0002c0004t0009g0025 a0002c0005t0003g0013 a0002c0005t0016g0039 a0002c0010t0001g0103 a0002c0010t0002g0054 a0003c0006t0001g0012 a0004c0008t0001g0018 a0005c0009t0001g0081 a0005c0009t0001g0082 a0006c0016t0001g0085 a0007c0013t0001g0091 a0008c0015t0001g0084 a0009c0011t0002g0042	301	HG00099.hp1 HG00099.hp2 HG00140.hp1 others(298): Show HG00099.hp1 HG00099.hp2 HG00140.hp1 HG00140.hp2 HG00423.hp1 HG00423.hp2 HG00438.hp1 HG00438.hp2 HG00544.hp1 HG00544.hp2 HG00558.hp1 HG00558.hp2 HG00597.hp1 HG00597.hp2 HG00609.hp1 HG00609.hp2 HG00621.hp1 HG00621.hp2 HG00639.hp1 HG00639.hp2 HG00642.hp1 HG00642.hp2 HG00673.hp1 HG00673.hp2 HG00733.hp1 HG00733.hp2 HG00738.hp1 HG00738.hp2 HG00741.hp1 HG00741.hp2 HG01069.hp1 HG01069.hp2 HG01070.hp1 HG01070.hp2 HG01071.hp1 HG01071.hp2 HG01074.hp1 HG01074.hp2 HG01099.hp1 HG01099.hp2 HG01106.hp1 HG01106.hp2 HG01109.hp1 HG01109.hp2 HG01175.hp1 HG01175.hp2 HG01192.hp1 HG01192.hp2 HG01243.hp1 HG01243.hp2 HG01257.hp1 HG01257.hp2 HG01258.hp1 HG01258.hp2 HG01261.hp1 HG01261.hp2 HG01346.hp1 HG01346.hp2 HG01358.hp1 HG01358.hp2 HG01361.hp1 HG01361.hp2 HG01433.hp1 HG01433.hp2 HG01496.hp1 HG01496.hp2 HG01515.hp1 HG01515.hp2 HG01516.hp1 HG01516.hp2 HG01517.hp1 HG01517.hp2 HG01884.hp1 HG01884.hp2 HG01891.hp1 HG01891.hp2 HG01934.hp1 HG01934.hp2 HG01943.hp1 HG01943.hp2 HG01978.hp1 HG01978.hp2 HG01981.hp1 HG01981.hp2 HG01993.hp1 HG01993.hp2 HG02027.hp1 HG02027.hp2 HG02040.hp1 HG02040.hp2 HG02055.hp1 HG02055.hp2 HG02056.hp1 HG02056.hp2 HG02071.hp1 HG02071.hp2 HG02109.hp1 HG02109.hp2 HG02129.hp1 HG02129.hp2 HG02132.hp1 HG02132.hp2 HG02135.hp1 HG02135.hp2 HG02145.hp1 HG02145.hp2 HG02148.hp1 HG02148.hp2 HG02155.hp1 HG02155.hp2 HG02165.hp1 HG02165.hp2 HG02257.hp1 HG02257.hp2 HG02258.hp1 HG02258.hp2 HG02273.hp1 HG02273.hp2 HG02280.hp1 HG02280.hp2 HG02293.hp1 HG02293.hp2 HG02300.hp1 HG02300.hp2 HG02451.hp1 HG02451.hp2 HG02559.hp1 HG02559.hp2 HG02572.hp1 HG02572.hp2 HG02615.hp1 HG02615.hp2 HG02622.hp1 HG02622.hp2 HG02630.hp1 HG02630.hp2 HG02647.hp1 HG02647.hp2 HG02698.hp1 HG02698.hp2 HG02717.hp1 HG02717.hp2 HG02723.hp1 HG02723.hp2 HG02738.hp1 HG02738.hp2 HG02809.hp1 HG02809.hp2 HG02818.hp1 HG02818.hp2 HG02886.hp1 HG02886.hp2 HG02895.hp1 HG02895.hp2 HG02896.hp1 HG02896.hp2 HG02897.hp1 HG02897.hp2 HG02922.hp1 HG02922.hp2 HG02965.hp1 HG02965.hp2 HG02970.hp1 HG02970.hp2 HG02976.hp1 HG02976.hp2 HG03017.hp1 HG03017.hp2 HG03041.hp1 HG03041.hp2 HG03098.hp1 HG03098.hp2 HG03130.hp1 HG03130.hp2 HG03139.hp1 HG03139.hp2 HG03195.hp1 HG03195.hp2 HG03209.hp1 HG03209.hp2 HG03225.hp1 HG03225.hp2 HG03239.hp1 HG03239.hp2 HG03453.hp1 HG03453.hp2 HG03471.hp1 HG03471.hp2 HG03486.hp1 HG03486.hp2 HG03490.hp1 HG03490.hp2 HG03491.hp1 HG03491.hp2 HG03492.hp1 HG03492.hp2 HG03516.hp1 HG03516.hp2 HG03540.hp1 HG03540.hp2 HG03579.hp1 HG03579.hp2 HG03654.hp1 HG03654.hp2 HG03688.hp1 HG03688.hp2 HG03704.hp1 HG03704.hp2 HG03710.hp1 HG03710.hp2 HG03834.hp1 HG03834.hp2 HG03927.hp1 HG03927.hp2 HG03942.hp1 HG03942.hp2 HG04199.hp1 HG04199.hp2 HG04204.hp1 HG04204.hp2 HG06807.hp1 HG06807.hp2 NA18522.hp1 NA18522.hp2 NA18612.hp1 NA18612.hp2 NA18747.hp1 NA18747.hp2 NA18906.hp1 NA18906.hp2 NA18942.hp1 NA18942.hp2 NA18943.hp1 NA18943.hp2 NA18944.hp1 NA18944.hp2 NA18951.hp1 NA18951.hp2 NA18953.hp1 NA18953.hp2 NA18954.hp1 NA18954.hp2 NA18957.hp1 NA18957.hp2 NA18959.hp1 NA18959.hp2 NA18962.hp1 NA18962.hp2 NA18964.hp1 NA18964.hp2 NA18971.hp1 NA18971.hp2 NA18975.hp1 NA18975.hp2 NA18978.hp1 NA18978.hp2 NA18987.hp1 NA18987.hp2 NA18990.hp1 NA18990.hp2 NA18995.hp1 NA18995.hp2 NA19000.hp1 NA19000.hp2 NA19001.hp1 NA19001.hp2 NA19004.hp1 NA19004.hp2 NA19005.hp1 NA19005.hp2 NA19011.hp1 NA19011.hp2 NA19012.hp1 NA19012.hp2 NA19030.hp1 NA19030.hp2 NA19043.hp1 NA19043.hp2 NA19055.hp1 NA19055.hp2 NA19065.hp1 NA19065.hp2 NA19079.hp1 NA19079.hp2 NA19090.hp1 NA19090.hp2 NA19240.hp1 NA19240.hp2 NA20129.hp1 NA20129.hp2 NA20300.hp1 NA20300.hp2 NA20752.hp1 NA20752.hp2 NA20805.hp1 NA20805.hp2 NA20905.hp1 NA20905.hp2 NA21309.hp1 NA21309.hp2 homoSapiens_chm13v2.hp1	intron_variant	MODIFIER	c.462+660C>A c.462+660C>A	CTSE	ENSG00000196188.12	transcript	ENST00000358184.7	protein_coding	4/8	chr1	206020389
chr1:206020574	A A	G G	1	a0001c0001t0001g0065 a0001c0001t0001g0065	1	HG01070.hp2 HG01070.hp2	intron_variant	MODIFIER	c.462+475T>C c.462+475T>C	CTSE	ENSG00000196188.12	transcript	ENST00000358184.7	protein_coding	4/8	chr1	206020574
chr1:206020690	A A	C C	1	a0001c0001t0001g0005 a0001c0001t0001g0005	8	HG00558.hp2 HG02132.hp1 NA18962.hp2 others(5): Show HG00558.hp2 HG02132.hp1 NA18962.hp2 NA18964.hp2 NA18987.hp1 NA19004.hp1 NA19011.hp2 NA19012.hp2	intron_variant	MODIFIER	c.462+359T>G c.462+359T>G	CTSE	ENSG00000196188.12	transcript	ENST00000358184.7	protein_coding	4/8	chr1	206020690
chr1:206020736	G G	A A	3	a0001c0001t0008g0060 a0001c0001t0008g0105 a0001c0001t0011g0055 a0001c0001t0008g0060 a0001c0001t0008g0105 a0001c0001t0011g0055	3	HG01109.hp1 HG01891.hp1 HG03209.hp2 HG01109.hp1 HG01891.hp1 HG03209.hp2	intron_variant	MODIFIER	c.462+313C>T c.462+313C>T	CTSE	ENSG00000196188.12	transcript	ENST00000358184.7	protein_coding	4/8	chr1	206020736
chr1:206020939	T T	C C	5	a0001c0002t0001g0006 a0001c0002t0002g0046 a0001c0002t0007g0094 others(2): Show a0001c0002t0001g0006 a0001c0002t0002g0046 a0001c0002t0007g0094 a0001c0002t0007g0096 a0001c0014t0007g0095	11	HG02055.hp2 HG02257.hp2 HG02572.hp2 others(8): Show HG02055.hp2 HG02257.hp2 HG02572.hp2 HG02647.hp2 HG02895.hp1 HG02897.hp1 HG02922.hp2 HG02965.hp1 HG03486.hp2 NA19043.hp1 NA19240.hp2	intron_variant	MODIFIER	c.462+110A>G c.462+110A>G	CTSE	ENSG00000196188.12	transcript	ENST00000358184.7	protein_coding	4/8	chr1	206020939
chr1:206021182	A A	G G	2	a0001c0001t0002g0041 a0001c0002t0002g0040 a0001c0001t0002g0041 a0001c0002t0002g0040	2	HG03540.hp1 NA21309.hp1 HG03540.hp1 NA21309.hp1	intron_variant	MODIFIER	c.344-15T>C c.344-15T>C	CTSE	ENSG00000196188.12	transcript	ENST00000358184.7	protein_coding	3/8	chr1	206021182
chr1:206021210	T T	A A	3	a0001c0001t0008g0060 a0001c0001t0008g0105 a0001c0001t0011g0055 a0001c0001t0008g0060 a0001c0001t0008g0105 a0001c0001t0011g0055	3	HG01109.hp1 HG01891.hp1 HG03209.hp2 HG01109.hp1 HG01891.hp1 HG03209.hp2	intron_variant	MODIFIER	c.344-43A>T c.344-43A>T	CTSE	ENSG00000196188.12	transcript	ENST00000358184.7	protein_coding	3/8	chr1	206021210
chr1:206021242	C C	T T	1	a0001c0001t0001g0064 a0001c0001t0001g0064	1	HG03239.hp1 HG03239.hp1	intron_variant	MODIFIER	c.344-75G>A c.344-75G>A	CTSE	ENSG00000196188.12	transcript	ENST00000358184.7	protein_coding	3/8	chr1	206021242
chr1:206021553	G G	A A	19	a0001c0002t0001g0003 a0001c0002t0001g0020 a0001c0002t0001g0026 others(16): Show a0001c0002t0001g0003 a0001c0002t0001g0020 a0001c0002t0001g0026 a0001c0002t0001g0035 a0001c0002t0001g0100 a0001c0002t0001g0101 a0001c0002t0001g0102 a0001c0002t0002g0024 a0001c0002t0002g0049 a0001c0002t0002g0050 a0001c0002t0014g0048 a0001c0002t0022g0098 a0001c0012t0001g0099 a0002c0004t0002g0007 a0002c0004t0002g0017 a0002c0004t0002g0053 a0002c0004t0009g0025 a0002c0010t0001g0103 a0002c0010t0002g0054	42	HG00140.hp2 HG00423.hp2 HG00642.hp1 others(39): Show HG00140.hp2 HG00423.hp2 HG00642.hp1 HG01069.hp1 HG01070.hp1 HG01071.hp1 HG01071.hp2 HG01099.hp2 HG01192.hp2 HG01261.hp1 HG01346.hp1 HG01358.hp1 HG01361.hp1 HG01496.hp2 HG01516.hp1 HG01516.hp2 HG01517.hp2 HG02258.hp2 HG02280.hp2 HG02300.hp2 HG02630.hp2 HG02723.hp2 HG02809.hp1 HG02818.hp2 HG02896.hp2 HG02970.hp1 HG03017.hp2 HG03041.hp1 HG03139.hp2 HG03195.hp1 HG03225.hp2 HG03453.hp2 HG03471.hp1 HG03516.hp1 HG06807.hp1 NA18522.hp1 NA19030.hp2 NA19043.hp2 NA19240.hp1 NA20129.hp1 NA20129.hp2 NA20300.hp1	intron_variant	MODIFIER	c.344-386C>T c.344-386C>T	CTSE	ENSG00000196188.12	transcript	ENST00000358184.7	protein_coding	3/8	chr1	206021553
chr1:206021770	A A	T T	2	a0001c0001t0002g0015 a0001c0001t0004g0010 a0001c0001t0002g0015 a0001c0001t0004g0010	8	HG01884.hp2 HG02055.hp1 HG02615.hp1 others(5): Show HG01884.hp2 HG02055.hp1 HG02615.hp1 HG02622.hp1 HG02896.hp1 HG02897.hp2 HG03540.hp2 HG03579.hp2	intron_variant	MODIFIER	c.343+380T>A c.343+380T>A	CTSE	ENSG00000196188.12	transcript	ENST00000358184.7	protein_coding	3/8	chr1	206021770
chr1:206021789	G G	A A	1	a0001c0001t0001g0036 a0001c0001t0001g0036	2	HG02135.hp1 NA18944.hp1 HG02135.hp1 NA18944.hp1	intron_variant	MODIFIER	c.343+361C>T c.343+361C>T	CTSE	ENSG00000196188.12	transcript	ENST00000358184.7	protein_coding	3/8	chr1	206021789
chr1:206021936	C C	A A	1	a0001c0007t0011g0051 a0001c0007t0011g0051	1	HG02559.hp1 HG02559.hp1	intron_variant	MODIFIER	c.343+214G>T c.343+214G>T	CTSE	ENSG00000196188.12	transcript	ENST00000358184.7	protein_coding	3/8	chr1	206021936
chr1:206021962	T T	C C	1	a0001c0007t0011g0051 a0001c0007t0011g0051	1	HG02559.hp1 HG02559.hp1	intron_variant	MODIFIER	c.343+188A>G c.343+188A>G	CTSE	ENSG00000196188.12	transcript	ENST00000358184.7	protein_coding	3/8	chr1	206021962
chr1:206022064	T T	A A	1	a0001c0001t0002g0052 a0001c0001t0002g0052	1	HG03098.hp1 HG03098.hp1	intron_variant	MODIFIER	c.343+86A>T c.343+86A>T	CTSE	ENSG00000196188.12	transcript	ENST00000358184.7	protein_coding	3/8	chr1	206022064
chr1:206022270	G G	A A	1	a0001c0001t0001g0037 a0001c0001t0001g0037	2	NA18944.hp2 NA18995.hp1 NA18944.hp2 NA18995.hp1	splice_region_variant&intron_variant	LOW	c.226-3C>T c.226-3C>T	CTSE	ENSG00000196188.12	transcript	ENST00000358184.7	protein_coding	2/8	chr1	206022270
chr1:206022354	G G	A A	1	a0001c0001t0018g0056 a0001c0001t0018g0056	1	NA18975.hp1 NA18975.hp1	intron_variant	MODIFIER	c.226-87C>T c.226-87C>T	CTSE	ENSG00000196188.12	transcript	ENST00000358184.7	protein_coding	2/8	chr1	206022354
chr1:206022393	G G	A A	2	a0001c0001t0001g0104 a0001c0001t0012g0038 a0001c0001t0001g0104 a0001c0001t0012g0038	3	HG02109.hp1 HG02886.hp1 HG02976.hp2 HG02109.hp1 HG02886.hp1 HG02976.hp2	intron_variant	MODIFIER	c.226-126C>T c.226-126C>T	CTSE	ENSG00000196188.12	transcript	ENST00000358184.7	protein_coding	2/8	chr1	206022393
chr1:206022409	C C	T T	1	a0001c0001t0001g0063 a0001c0001t0001g0063	1	NA18942.hp2 NA18942.hp2	intron_variant	MODIFIER	c.226-142G>A c.226-142G>A	CTSE	ENSG00000196188.12	transcript	ENST00000358184.7	protein_coding	2/8	chr1	206022409
chr1:206022455	A A	G G	1	a0001c0001t0018g0056 a0001c0001t0018g0056	1	NA18975.hp1 NA18975.hp1	intron_variant	MODIFIER	c.226-188T>C c.226-188T>C	CTSE	ENSG00000196188.12	transcript	ENST00000358184.7	protein_coding	2/8	chr1	206022455
chr1:206022592	T T	A A	3	a0001c0001t0008g0060 a0001c0001t0008g0105 a0001c0001t0011g0055 a0001c0001t0008g0060 a0001c0001t0008g0105 a0001c0001t0011g0055	3	HG01109.hp1 HG01891.hp1 HG03209.hp2 HG01109.hp1 HG01891.hp1 HG03209.hp2	intron_variant	MODIFIER	c.225+309A>T c.225+309A>T	CTSE	ENSG00000196188.12	transcript	ENST00000358184.7	protein_coding	2/8	chr1	206022592
chr1:206022811	G G	A A	1	a0001c0001t0018g0056 a0001c0001t0018g0056	1	NA18975.hp1 NA18975.hp1	intron_variant	MODIFIER	c.225+90C>T c.225+90C>T	CTSE	ENSG00000196188.12	transcript	ENST00000358184.7	protein_coding	2/8	chr1	206022811
chr1:206023071	C C	T T	1	a0001c0001t0001g0062 a0001c0001t0001g0062	1	HG00597.hp1 HG00597.hp1	intron_variant	MODIFIER	c.69-14G>A c.69-14G>A	CTSE	ENSG00000196188.12	transcript	ENST00000358184.7	protein_coding	1/8	chr1	206023071
chr1:206023124	C C	T T	1	a0002c0005t0016g0039 a0002c0005t0016g0039	1	HG03453.hp1 HG03453.hp1	intron_variant	MODIFIER	c.69-67G>A c.69-67G>A	CTSE	ENSG00000196188.12	transcript	ENST00000358184.7	protein_coding	1/8	chr1	206023124
chr1:206023193	C C	A A	1	a0001c0001t0001g0106 a0001c0001t0001g0106	1	NA19055.hp1 NA19055.hp1	intron_variant	MODIFIER	c.69-136G>T c.69-136G>T	CTSE	ENSG00000196188.12	transcript	ENST00000358184.7	protein_coding	1/8	chr1	206023193
chr1:206023334	G G	A A	2	a0001c0001t0001g0014 a0001c0001t0001g0107 a0001c0001t0001g0014 a0001c0001t0001g0107	5	HG01109.hp2 HG02809.hp2 HG03041.hp2 others(2): Show HG01109.hp2 HG02809.hp2 HG03041.hp2 HG03209.hp1 HG03516.hp2	intron_variant	MODIFIER	c.69-277C>T c.69-277C>T	CTSE	ENSG00000196188.12	transcript	ENST00000358184.7	protein_coding	1/8	chr1	206023334
chr1:206023463	C C	T T	1	a0001c0001t0001g0061 a0001c0001t0001g0061	1	HG01433.hp2 HG01433.hp2	intron_variant	MODIFIER	c.68+261G>A c.68+261G>A	CTSE	ENSG00000196188.12	transcript	ENST00000358184.7	protein_coding	1/8	chr1	206023463
chr1:206023643	C C	T T	5	a0001c0001t0001g0058 a0001c0001t0003g0057 a0001c0001t0008g0060 others(2): Show a0001c0001t0001g0058 a0001c0001t0003g0057 a0001c0001t0008g0060 a0001c0002t0001g0026 a0001c0003t0013g0059	6	HG01109.hp1 HG02647.hp1 HG02886.hp2 others(3): Show HG01109.hp1 HG02647.hp1 HG02886.hp2 HG02976.hp1 HG03516.hp1 NA20129.hp2	intron_variant	MODIFIER	c.68+81G>A c.68+81G>A	CTSE	ENSG00000196188.12	transcript	ENST00000358184.7	protein_coding	1/8	chr1	206023643

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🧬 JoGo Online Haplotype Explorer CTSE_chr1_206004264_206028895

JoGo Local Haplotype Explorer (on iGV) CTSE_chr1_206004264_206028895

Translation Multiple Alignment View

🧬 Gene Summary

AAmino acid(protein) Level Haplotype Info (Total: 9)

CCoding Level Haplotype Info (Total: 16)

TTranscript Level Haplotype Info (Total: 22)

GGenebody Level Haplotype Info (Total: 107)

A C AC Level (Amino Acid + Coding) Haplotype Info (Total: 16)

A C T ACT Level (Amino Acid + Coding + Transcript) Haplotype Info (Total: 40)

A C T G ACTG Level (Amino Acid + Coding + Transcript + Genebody) Haplotype Info (Total: 107)

Haplotype Details by Sample (Haploid Level) (Total: 302)

AAmino acid(protein) Level Haplotype Related Variants (Effect to Protein Coding Variants) (Total: 8)

CCoding Level Variants (Synonymous Mutations) (Total: 6)

TTranscript Level Haplotype Variants (5'UTR+3'UTR) (Total: 16)

GGenebody Level Haplotype Variants (Intron) (Total: 202)

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Annotation (Repeats)

Annotation (SNP Array)