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geneid	132158
ensemblid	ENSG00000168237.18
hgncid	24247
symbol	GLYCTK
name	glycerate kinase
refseq_nuc	NM_145262.4
refseq_prot	NP_660305.2
ensembl_nuc	ENST00000436784.7
ensembl_prot	ENSP00000389175.2
mane_status	MANE Select
chr	chr3
start	52287828
end	52295257
strand	+
ver	v1.2
region	chr3:52287828-52295257
region5000	chr3:52282828-52300257
regionname0	GLYCTK_chr3_52287828_52295257
regionname5000	GLYCTK_chr3_52282828_52300257

ahapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	alen	total	AFR	AMR	EAS	EUR	SAS	JPT	regionname	genename	aa	chr	start	end
a0001	1/1	523	346	81	67	141	15	40	108	GLYCTK_chr3_52282828_52300257	GLYCTK	copy fasta	chr3	52282828	52300257
a0002	0/0	523	8	0	4	3	1	0	3	GLYCTK_chr3_52282828_52300257	GLYCTK	copy fasta	chr3	52282828	52300257
a0003	0/0	523	3	2	1	0	0	0	0	GLYCTK_chr3_52282828_52300257	GLYCTK	copy fasta	chr3	52282828	52300257
a0004	0/0	523	2	2	0	0	0	0	0	GLYCTK_chr3_52282828_52300257	GLYCTK	copy fasta	chr3	52282828	52300257
a0005	0/0	523	1	1	0	0	0	0	0	GLYCTK_chr3_52282828_52300257	GLYCTK	copy fasta	chr3	52282828	52300257
a0006	0/0	523	1	1	0	0	0	0	0	GLYCTK_chr3_52282828_52300257	GLYCTK	copy fasta	chr3	52282828	52300257
a0007	0/0	523	1	0	0	1	0	0	1	GLYCTK_chr3_52282828_52300257	GLYCTK	copy fasta	chr3	52282828	52300257
a0008	0/0	523	1	0	0	1	0	0	1	GLYCTK_chr3_52282828_52300257	GLYCTK	copy fasta	chr3	52282828	52300257
a0009	0/0	523	1	1	0	0	0	0	0	GLYCTK_chr3_52282828_52300257	GLYCTK	copy fasta	chr3	52282828	52300257
a0010	0/0	523	1	0	0	1	0	0	0	GLYCTK_chr3_52282828_52300257	GLYCTK	copy fasta	chr3	52282828	52300257
a0011	0/0	523	1	0	0	1	0	0	1	GLYCTK_chr3_52282828_52300257	GLYCTK	copy fasta	chr3	52282828	52300257

chapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	clen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	cseq	chr	start	end
c0001	1/1	1572	290	42	58	138	12	38	GLYCTK_chr3_52282828_52300257	GLYCTK	copy fasta	chr3	52282828	52300257
c0002	0/0	1572	49	35	9	0	3	2	GLYCTK_chr3_52282828_52300257	GLYCTK	copy fasta	chr3	52282828	52300257
c0003	0/0	1572	8	0	4	3	1	0	GLYCTK_chr3_52282828_52300257	GLYCTK	copy fasta	chr3	52282828	52300257
c0004	0/0	1572	3	2	1	0	0	0	GLYCTK_chr3_52282828_52300257	GLYCTK	copy fasta	chr3	52282828	52300257
c0005	0/0	1572	3	3	0	0	0	0	GLYCTK_chr3_52282828_52300257	GLYCTK	copy fasta	chr3	52282828	52300257
c0006	0/0	1572	2	2	0	0	0	0	GLYCTK_chr3_52282828_52300257	GLYCTK	copy fasta	chr3	52282828	52300257
c0007	0/0	1572	2	0	0	2	0	0	GLYCTK_chr3_52282828_52300257	GLYCTK	copy fasta	chr3	52282828	52300257
c0008	0/0	1572	1	0	0	1	0	0	GLYCTK_chr3_52282828_52300257	GLYCTK	copy fasta	chr3	52282828	52300257
c0009	0/0	1572	1	1	0	0	0	0	GLYCTK_chr3_52282828_52300257	GLYCTK	copy fasta	chr3	52282828	52300257
c0010	0/0	1572	1	1	0	0	0	0	GLYCTK_chr3_52282828_52300257	GLYCTK	copy fasta	chr3	52282828	52300257
c0011	0/0	1572	1	0	0	1	0	0	GLYCTK_chr3_52282828_52300257	GLYCTK	copy fasta	chr3	52282828	52300257
c0012	0/0	1572	1	1	0	0	0	0	GLYCTK_chr3_52282828_52300257	GLYCTK	copy fasta	chr3	52282828	52300257
c0013	0/0	1572	1	0	0	1	0	0	GLYCTK_chr3_52282828_52300257	GLYCTK	copy fasta	chr3	52282828	52300257
c0014	0/0	1572	1	0	0	1	0	0	GLYCTK_chr3_52282828_52300257	GLYCTK	copy fasta	chr3	52282828	52300257
c0015	0/0	1572	1	0	0	1	0	0	GLYCTK_chr3_52282828_52300257	GLYCTK	copy fasta	chr3	52282828	52300257
c0016	0/0	1572	1	1	0	0	0	0	GLYCTK_chr3_52282828_52300257	GLYCTK	copy fasta	chr3	52282828	52300257

thapid	grch38 chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	tlen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	tseq	chr	start	end
t0001	1/1	2220	286	46	62	129	12	35	GLYCTK_chr3_52282828_52300257	GLYCTK	copy fasta	chr3	52282828	52300257
t0002	0/0	2220	35	33	2	0	0	0	GLYCTK_chr3_52282828_52300257	GLYCTK	copy fasta	chr3	52282828	52300257
t0003	0/0	2220	15	3	7	0	3	2	GLYCTK_chr3_52282828_52300257	GLYCTK	copy fasta	chr3	52282828	52300257
t0004	0/0	2220	12	0	0	12	0	0	GLYCTK_chr3_52282828_52300257	GLYCTK	copy fasta	chr3	52282828	52300257
t0005	0/0	2220	4	3	1	0	0	0	GLYCTK_chr3_52282828_52300257	GLYCTK	copy fasta	chr3	52282828	52300257
t0006	0/0	2220	3	0	0	3	0	0	GLYCTK_chr3_52282828_52300257	GLYCTK	copy fasta	chr3	52282828	52300257
t0007	0/0	2220	2	0	0	0	0	2	GLYCTK_chr3_52282828_52300257	GLYCTK	copy fasta	chr3	52282828	52300257
t0008	0/0	2220	1	1	0	0	0	0	GLYCTK_chr3_52282828_52300257	GLYCTK	copy fasta	chr3	52282828	52300257
t0009	0/0	2220	1	0	0	1	0	0	GLYCTK_chr3_52282828_52300257	GLYCTK	copy fasta	chr3	52282828	52300257
t0010	0/0	2220	1	0	0	0	1	0	GLYCTK_chr3_52282828_52300257	GLYCTK	copy fasta	chr3	52282828	52300257
t0011	0/0	2220	1	0	0	1	0	0	GLYCTK_chr3_52282828_52300257	GLYCTK	copy fasta	chr3	52282828	52300257
t0012	0/0	2220	1	1	0	0	0	0	GLYCTK_chr3_52282828_52300257	GLYCTK	copy fasta	chr3	52282828	52300257
t0013	0/0	2220	1	1	0	0	0	0	GLYCTK_chr3_52282828_52300257	GLYCTK	copy fasta	chr3	52282828	52300257
t0014	0/0	2220	1	0	0	0	0	1	GLYCTK_chr3_52282828_52300257	GLYCTK	copy fasta	chr3	52282828	52300257
t0015	0/0	2220	1	0	0	1	0	0	GLYCTK_chr3_52282828_52300257	GLYCTK	copy fasta	chr3	52282828	52300257
t0016	0/0	2220	1	0	0	1	0	0	GLYCTK_chr3_52282828_52300257	GLYCTK	copy fasta	chr3	52282828	52300257

ghapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	chr	start	end
g0001	1/1	156	26	31	64	8	25	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
g0002	0/0	106	3	23	68	4	8	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
g0003	0/0	21	19	2	0	0	0	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
g0004	0/0	14	14	0	0	0	0	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
g0005	0/0	13	11	2	0	0	0	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
g0006	0/0	12	0	7	0	3	2	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
g0007	0/0	7	0	3	3	1	0	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
g0008	0/0	3	3	0	0	0	0	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
g0009	0/0	2	0	0	0	0	2	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
g0010	0/0	2	0	0	2	0	0	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
g0011	0/0	2	0	0	2	0	0	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
g0012	0/0	2	0	0	2	0	0	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
g0013	0/0	2	0	0	2	0	0	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
g0014	0/0	2	2	0	0	0	0	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
g0015	0/0	2	2	0	0	0	0	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
g0016	0/0	2	0	2	0	0	0	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
g0017	0/0	1	1	0	0	0	0	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
g0018	0/0	1	0	0	1	0	0	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
g0019	0/0	1	0	0	1	0	0	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
g0020	0/0	1	0	0	0	0	1	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
g0021	0/0	1	0	0	1	0	0	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
g0022	0/0	1	0	1	0	0	0	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
g0023	0/0	1	1	0	0	0	0	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
g0024	0/0	1	0	0	1	0	0	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
g0025	0/0	1	0	0	1	0	0	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
g0026	0/0	1	1	0	0	0	0	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
g0027	0/0	1	1	0	0	0	0	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
g0028	0/0	1	0	1	0	0	0	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
g0029	0/0	1	1	0	0	0	0	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
g0030	0/0	1	1	0	0	0	0	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
g0031	0/0	1	1	0	0	0	0	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
g0032	0/0	1	1	0	0	0	0	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
g0033	0/0	1	0	0	0	0	1	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
g0034	0/0	1	0	0	0	0	1	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257

achapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	clen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	cseq	chr	start	end
a0001c0001	1/1	1572	290	42	58	138	12	38	GLYCTK_chr3_52282828_52300257	GLYCTK	copy fasta	chr3	52282828	52300257
a0001c0002	0/0	1572	49	35	9	0	3	2	GLYCTK_chr3_52282828_52300257	GLYCTK	copy fasta	chr3	52282828	52300257
a0001c0005	0/0	1572	3	3	0	0	0	0	GLYCTK_chr3_52282828_52300257	GLYCTK	copy fasta	chr3	52282828	52300257
a0001c0007	0/0	1572	2	0	0	2	0	0	GLYCTK_chr3_52282828_52300257	GLYCTK	copy fasta	chr3	52282828	52300257
a0001c0009	0/0	1572	1	1	0	0	0	0	GLYCTK_chr3_52282828_52300257	GLYCTK	copy fasta	chr3	52282828	52300257
a0001c0015	0/0	1572	1	0	0	1	0	0	GLYCTK_chr3_52282828_52300257	GLYCTK	copy fasta	chr3	52282828	52300257
a0002c0003	0/0	1572	8	0	4	3	1	0	GLYCTK_chr3_52282828_52300257	GLYCTK	copy fasta	chr3	52282828	52300257
a0003c0004	0/0	1572	3	2	1	0	0	0	GLYCTK_chr3_52282828_52300257	GLYCTK	copy fasta	chr3	52282828	52300257
a0004c0006	0/0	1572	2	2	0	0	0	0	GLYCTK_chr3_52282828_52300257	GLYCTK	copy fasta	chr3	52282828	52300257
a0005c0016	0/0	1572	1	1	0	0	0	0	GLYCTK_chr3_52282828_52300257	GLYCTK	copy fasta	chr3	52282828	52300257
a0006c0010	0/0	1572	1	1	0	0	0	0	GLYCTK_chr3_52282828_52300257	GLYCTK	copy fasta	chr3	52282828	52300257
a0007c0014	0/0	1572	1	0	0	1	0	0	GLYCTK_chr3_52282828_52300257	GLYCTK	copy fasta	chr3	52282828	52300257
a0008c0013	0/0	1572	1	0	0	1	0	0	GLYCTK_chr3_52282828_52300257	GLYCTK	copy fasta	chr3	52282828	52300257
a0009c0012	0/0	1572	1	1	0	0	0	0	GLYCTK_chr3_52282828_52300257	GLYCTK	copy fasta	chr3	52282828	52300257
a0010c0011	0/0	1572	1	0	0	1	0	0	GLYCTK_chr3_52282828_52300257	GLYCTK	copy fasta	chr3	52282828	52300257
a0011c0008	0/0	1572	1	0	0	1	0	0	GLYCTK_chr3_52282828_52300257	GLYCTK	copy fasta	chr3	52282828	52300257

acthapid	grch38 chm13v2	tlen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	tseq	chr	start	end
a0001c0001t0001	1/1	3791	265	39	58	119	12	35	GLYCTK_chr3_52282828_52300257	GLYCTK	copy fasta	chr3	52282828	52300257
a0001c0001t0004	0/0	3791	12	0	0	12	0	0	GLYCTK_chr3_52282828_52300257	GLYCTK	copy fasta	chr3	52282828	52300257
a0001c0001t0005	0/0	3791	1	1	0	0	0	0	GLYCTK_chr3_52282828_52300257	GLYCTK	copy fasta	chr3	52282828	52300257
a0001c0001t0006	0/0	3791	3	0	0	3	0	0	GLYCTK_chr3_52282828_52300257	GLYCTK	copy fasta	chr3	52282828	52300257
a0001c0001t0007	0/0	3791	2	0	0	0	0	2	GLYCTK_chr3_52282828_52300257	GLYCTK	copy fasta	chr3	52282828	52300257
a0001c0001t0008	0/0	3791	1	1	0	0	0	0	GLYCTK_chr3_52282828_52300257	GLYCTK	copy fasta	chr3	52282828	52300257
a0001c0001t0009	0/0	3791	1	0	0	1	0	0	GLYCTK_chr3_52282828_52300257	GLYCTK	copy fasta	chr3	52282828	52300257
a0001c0001t0011	0/0	3791	1	0	0	1	0	0	GLYCTK_chr3_52282828_52300257	GLYCTK	copy fasta	chr3	52282828	52300257
a0001c0001t0012	0/0	3791	1	1	0	0	0	0	GLYCTK_chr3_52282828_52300257	GLYCTK	copy fasta	chr3	52282828	52300257
a0001c0001t0014	0/0	3791	1	0	0	0	0	1	GLYCTK_chr3_52282828_52300257	GLYCTK	copy fasta	chr3	52282828	52300257
a0001c0001t0015	0/0	3791	1	0	0	1	0	0	GLYCTK_chr3_52282828_52300257	GLYCTK	copy fasta	chr3	52282828	52300257
a0001c0001t0016	0/0	3791	1	0	0	1	0	0	GLYCTK_chr3_52282828_52300257	GLYCTK	copy fasta	chr3	52282828	52300257
a0001c0002t0002	0/0	3791	33	31	2	0	0	0	GLYCTK_chr3_52282828_52300257	GLYCTK	copy fasta	chr3	52282828	52300257
a0001c0002t0003	0/0	3791	15	3	7	0	3	2	GLYCTK_chr3_52282828_52300257	GLYCTK	copy fasta	chr3	52282828	52300257
a0001c0002t0013	0/0	3791	1	1	0	0	0	0	GLYCTK_chr3_52282828_52300257	GLYCTK	copy fasta	chr3	52282828	52300257
a0001c0005t0001	0/0	3791	3	3	0	0	0	0	GLYCTK_chr3_52282828_52300257	GLYCTK	copy fasta	chr3	52282828	52300257
a0001c0007t0001	0/0	3791	2	0	0	2	0	0	GLYCTK_chr3_52282828_52300257	GLYCTK	copy fasta	chr3	52282828	52300257
a0001c0009t0001	0/0	3791	1	1	0	0	0	0	GLYCTK_chr3_52282828_52300257	GLYCTK	copy fasta	chr3	52282828	52300257
a0001c0015t0001	0/0	3791	1	0	0	1	0	0	GLYCTK_chr3_52282828_52300257	GLYCTK	copy fasta	chr3	52282828	52300257
a0002c0003t0001	0/0	3791	7	0	4	3	0	0	GLYCTK_chr3_52282828_52300257	GLYCTK	copy fasta	chr3	52282828	52300257
a0002c0003t0010	0/0	3791	1	0	0	0	1	0	GLYCTK_chr3_52282828_52300257	GLYCTK	copy fasta	chr3	52282828	52300257
a0003c0004t0005	0/0	3791	3	2	1	0	0	0	GLYCTK_chr3_52282828_52300257	GLYCTK	copy fasta	chr3	52282828	52300257
a0004c0006t0002	0/0	3791	2	2	0	0	0	0	GLYCTK_chr3_52282828_52300257	GLYCTK	copy fasta	chr3	52282828	52300257
a0005c0016t0001	0/0	3791	1	1	0	0	0	0	GLYCTK_chr3_52282828_52300257	GLYCTK	copy fasta	chr3	52282828	52300257
a0006c0010t0001	0/0	3791	1	1	0	0	0	0	GLYCTK_chr3_52282828_52300257	GLYCTK	copy fasta	chr3	52282828	52300257
a0007c0014t0001	0/0	3791	1	0	0	1	0	0	GLYCTK_chr3_52282828_52300257	GLYCTK	copy fasta	chr3	52282828	52300257
a0008c0013t0001	0/0	3791	1	0	0	1	0	0	GLYCTK_chr3_52282828_52300257	GLYCTK	copy fasta	chr3	52282828	52300257
a0009c0012t0001	0/0	3791	1	1	0	0	0	0	GLYCTK_chr3_52282828_52300257	GLYCTK	copy fasta	chr3	52282828	52300257
a0010c0011t0001	0/0	3791	1	0	0	1	0	0	GLYCTK_chr3_52282828_52300257	GLYCTK	copy fasta	chr3	52282828	52300257
a0011c0008t0001	0/0	3791	1	0	0	1	0	0	GLYCTK_chr3_52282828_52300257	GLYCTK	copy fasta	chr3	52282828	52300257

actghapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	chr	start	end
a0001c0001t0001g0001	1/1	139	24	31	51	8	23	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
a0001c0001t0001g0002	0/0	96	3	23	58	4	8	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
a0001c0001t0001g0005	0/0	8	7	1	0	0	0	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
a0001c0001t0001g0009	0/0	2	0	0	0	0	2	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
a0001c0001t0001g0010	0/0	2	0	0	2	0	0	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
a0001c0001t0001g0011	0/0	2	0	0	2	0	0	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
a0001c0001t0001g0013	0/0	2	0	0	2	0	0	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
a0001c0001t0001g0016	0/0	2	0	2	0	0	0	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
a0001c0001t0001g0018	0/0	1	0	0	1	0	0	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
a0001c0001t0001g0019	0/0	1	0	0	1	0	0	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
a0001c0001t0001g0020	0/0	1	0	0	0	0	1	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
a0001c0001t0001g0021	0/0	1	0	0	1	0	0	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
a0001c0001t0001g0023	0/0	1	1	0	0	0	0	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
a0001c0001t0001g0025	0/0	1	0	0	1	0	0	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
a0001c0001t0001g0027	0/0	1	1	0	0	0	0	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
a0001c0001t0001g0028	0/0	1	0	1	0	0	0	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
a0001c0001t0001g0029	0/0	1	1	0	0	0	0	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
a0001c0001t0001g0030	0/0	1	1	0	0	0	0	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
a0001c0001t0001g0031	0/0	1	1	0	0	0	0	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
a0001c0001t0001g0033	0/0	1	0	0	0	0	1	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
a0001c0001t0004g0001	0/0	9	0	0	9	0	0	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
a0001c0001t0004g0012	0/0	2	0	0	2	0	0	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
a0001c0001t0004g0024	0/0	1	0	0	1	0	0	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
a0001c0001t0005g0032	0/0	1	1	0	0	0	0	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
a0001c0001t0006g0002	0/0	3	0	0	3	0	0	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
a0001c0001t0007g0001	0/0	2	0	0	0	0	2	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
a0001c0001t0008g0026	0/0	1	1	0	0	0	0	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
a0001c0001t0009g0001	0/0	1	0	0	1	0	0	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
a0001c0001t0011g0001	0/0	1	0	0	1	0	0	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
a0001c0001t0012g0005	0/0	1	1	0	0	0	0	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
a0001c0001t0014g0034	0/0	1	0	0	0	0	1	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
a0001c0001t0015g0002	0/0	1	0	0	1	0	0	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
a0001c0001t0016g0001	0/0	1	0	0	1	0	0	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
a0001c0002t0002g0003	0/0	19	17	2	0	0	0	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
a0001c0002t0002g0004	0/0	13	13	0	0	0	0	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
a0001c0002t0002g0017	0/0	1	1	0	0	0	0	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
a0001c0002t0003g0006	0/0	12	0	7	0	3	2	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
a0001c0002t0003g0008	0/0	3	3	0	0	0	0	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
a0001c0002t0013g0004	0/0	1	1	0	0	0	0	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
a0001c0005t0001g0005	0/0	1	1	0	0	0	0	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
a0001c0005t0001g0015	0/0	2	2	0	0	0	0	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
a0001c0007t0001g0002	0/0	2	0	0	2	0	0	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
a0001c0009t0001g0014	0/0	1	1	0	0	0	0	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
a0001c0015t0001g0002	0/0	1	0	0	1	0	0	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
a0002c0003t0001g0007	0/0	6	0	3	3	0	0	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
a0002c0003t0001g0022	0/0	1	0	1	0	0	0	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
a0002c0003t0010g0007	0/0	1	0	0	0	1	0	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
a0003c0004t0005g0005	0/0	3	2	1	0	0	0	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
a0004c0006t0002g0003	0/0	2	2	0	0	0	0	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
a0005c0016t0001g0001	0/0	1	1	0	0	0	0	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
a0006c0010t0001g0014	0/0	1	1	0	0	0	0	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
a0007c0014t0001g0001	0/0	1	0	0	1	0	0	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
a0008c0013t0001g0002	0/0	1	0	0	1	0	0	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
a0009c0012t0001g0001	0/0	1	1	0	0	0	0	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
a0010c0011t0001g0002	0/0	1	0	0	1	0	0	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
a0011c0008t0001g0002	0/0	1	0	0	1	0	0	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257

sampleid	ID haplotypeid	ahapid	chapid	thapid	ghapid	gpopname	popname	regionname	genename	chr	start	end
HG00099	hp1	a0001	c0001	t0001	g0001	EUR	GBR	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
HG00099	hp2	a0001	c0001	t0001	g0001	EUR	GBR	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
HG00140	hp1	a0001	c0001	t0001	g0001	EUR	GBR	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
HG00140	hp2	a0001	c0001	t0001	g0001	EUR	GBR	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
HG00323	hp1	a0001	c0001	t0001	g0001	EUR	FIN	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
HG00323	hp2	a0001	c0001	t0001	g0002	EUR	FIN	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
HG00438	hp1	a0001	c0001	t0001	g0001	EAS	CHS	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
HG00438	hp2	a0010	c0011	t0001	g0002	EAS	CHS	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
HG00544	hp1	a0001	c0001	t0001	g0002	EAS	CHS	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
HG00544	hp2	a0001	c0001	t0001	g0001	EAS	CHS	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
HG00558	hp1	a0001	c0001	t0001	g0002	EAS	CHS	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
HG00558	hp2	a0001	c0001	t0001	g0001	EAS	CHS	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
HG00597	hp1	a0001	c0001	t0001	g0002	EAS	CHS	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
HG00597	hp2	a0001	c0001	t0001	g0001	EAS	CHS	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
HG00609	hp1	a0001	c0001	t0001	g0010	EAS	CHS	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
HG00609	hp2	a0001	c0001	t0006	g0002	EAS	CHS	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
HG00621	hp1	a0001	c0001	t0001	g0001	EAS	CHS	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
HG00621	hp2	a0001	c0001	t0001	g0002	EAS	CHS	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
HG00639	hp1	a0001	c0002	t0003	g0006	AMR	PUR	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
HG00639	hp2	a0001	c0001	t0001	g0001	AMR	PUR	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
HG00642	hp1	a0001	c0001	t0001	g0002	AMR	PUR	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
HG00642	hp2	a0001	c0001	t0001	g0001	AMR	PUR	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
HG00673	hp1	a0001	c0001	t0001	g0001	EAS	CHS	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
HG00673	hp2	a0001	c0001	t0001	g0002	EAS	CHS	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
HG00733	hp1	a0001	c0001	t0001	g0002	AMR	PUR	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
HG00733	hp2	a0001	c0002	t0003	g0006	AMR	PUR	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
HG00735	hp1	a0002	c0003	t0001	g0022	AMR	PUR	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
HG00735	hp2	a0001	c0001	t0001	g0001	AMR	PUR	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
HG00738	hp1	a0001	c0001	t0001	g0001	AMR	PUR	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
HG00738	hp2	a0001	c0001	t0001	g0002	AMR	PUR	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
HG00741	hp1	a0001	c0002	t0003	g0006	AMR	PUR	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
HG00741	hp2	a0001	c0001	t0001	g0001	AMR	PUR	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
HG01069	hp1	a0001	c0001	t0001	g0001	AMR	PUR	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
HG01069	hp2	a0001	c0002	t0003	g0006	AMR	PUR	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
HG01070	hp1	a0001	c0001	t0001	g0001	AMR	PUR	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
HG01070	hp2	a0001	c0001	t0001	g0002	AMR	PUR	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
HG01071	hp1	a0001	c0001	t0001	g0001	AMR	PUR	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
HG01071	hp2	a0001	c0001	t0001	g0002	AMR	PUR	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
HG01074	hp1	a0001	c0001	t0001	g0001	AMR	PUR	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
HG01074	hp2	a0001	c0001	t0001	g0005	AMR	PUR	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
HG01081	hp1	a0002	c0003	t0001	g0007	AMR	PUR	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
HG01081	hp2	a0001	c0001	t0001	g0001	AMR	PUR	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
HG01099	hp1	a0001	c0001	t0001	g0002	AMR	PUR	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
HG01099	hp2	a0001	c0001	t0001	g0002	AMR	PUR	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
HG01106	hp1	a0001	c0001	t0001	g0001	AMR	PUR	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
HG01106	hp2	a0001	c0001	t0001	g0002	AMR	PUR	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
HG01109	hp1	a0001	c0001	t0001	g0001	AMR	PUR	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
HG01109	hp2	a0001	c0001	t0001	g0001	AMR	PUR	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
HG01169	hp1	a0001	c0001	t0001	g0002	AMR	PUR	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
HG01169	hp2	a0001	c0001	t0001	g0001	AMR	PUR	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
HG01175	hp1	a0001	c0001	t0001	g0016	AMR	PUR	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
HG01175	hp2	a0001	c0001	t0001	g0001	AMR	PUR	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
HG01192	hp1	a0001	c0001	t0001	g0002	AMR	PUR	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
HG01192	hp2	a0002	c0003	t0001	g0007	AMR	PUR	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
HG01243	hp1	a0001	c0002	t0002	g0003	AMR	PUR	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
HG01243	hp2	a0003	c0004	t0005	g0005	AMR	PUR	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
HG01255	hp1	a0002	c0003	t0001	g0007	AMR	CLM	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
HG01255	hp2	a0001	c0001	t0001	g0001	AMR	CLM	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
HG01257	hp1	a0001	c0001	t0001	g0002	AMR	CLM	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
HG01257	hp2	a0001	c0001	t0001	g0016	AMR	CLM	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
HG01258	hp1	a0001	c0001	t0001	g0001	AMR	CLM	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
HG01258	hp2	a0001	c0001	t0001	g0002	AMR	CLM	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
HG01261	hp1	a0001	c0001	t0001	g0001	AMR	CLM	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
HG01261	hp2	a0001	c0001	t0001	g0002	AMR	CLM	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
HG01358	hp1	a0001	c0001	t0001	g0002	AMR	CLM	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
HG01358	hp2	a0001	c0001	t0001	g0001	AMR	CLM	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
HG01361	hp1	a0001	c0001	t0001	g0002	AMR	CLM	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
HG01361	hp2	a0001	c0002	t0003	g0006	AMR	CLM	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
HG01433	hp1	a0001	c0001	t0001	g0001	AMR	CLM	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
HG01433	hp2	a0001	c0001	t0001	g0002	AMR	CLM	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
HG01515	hp1	a0001	c0002	t0003	g0006	EUR	IBS	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
HG01515	hp2	a0001	c0002	t0003	g0006	EUR	IBS	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
HG01516	hp1	a0001	c0001	t0001	g0001	EUR	IBS	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
HG01516	hp2	a0001	c0001	t0001	g0002	EUR	IBS	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
HG01517	hp1	a0001	c0001	t0001	g0002	EUR	IBS	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
HG01517	hp2	a0001	c0002	t0003	g0006	EUR	IBS	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
HG01884	hp1	a0001	c0001	t0005	g0032	AFR	ACB	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
HG01884	hp2	a0001	c0002	t0002	g0004	AFR	ACB	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
HG01891	hp1	a0006	c0010	t0001	g0014	AFR	ACB	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
HG01891	hp2	a0001	c0001	t0001	g0005	AFR	ACB	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
HG01928	hp1	a0001	c0001	t0001	g0001	AMR	PEL	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
HG01928	hp2	a0001	c0001	t0001	g0001	AMR	PEL	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
HG01934	hp1	a0001	c0002	t0002	g0003	AMR	PEL	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
HG01934	hp2	a0001	c0001	t0001	g0001	AMR	PEL	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
HG01943	hp1	a0001	c0001	t0001	g0002	AMR	PEL	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
HG01943	hp2	a0001	c0001	t0001	g0001	AMR	PEL	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
HG01952	hp1	a0001	c0001	t0001	g0002	AMR	PEL	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
HG01952	hp2	a0001	c0001	t0001	g0001	AMR	PEL	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
HG01978	hp1	a0001	c0001	t0001	g0002	AMR	PEL	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
HG01978	hp2	a0001	c0001	t0001	g0001	AMR	PEL	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
HG01981	hp1	a0001	c0001	t0001	g0002	AMR	PEL	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
HG01981	hp2	a0001	c0001	t0001	g0001	AMR	PEL	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
HG01993	hp1	a0001	c0001	t0001	g0001	AMR	PEL	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
HG01993	hp2	a0001	c0001	t0001	g0002	AMR	PEL	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
HG02004	hp1	a0001	c0001	t0001	g0001	AMR	PEL	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
HG02004	hp2	a0001	c0001	t0001	g0001	AMR	PEL	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
HG02015	hp1	a0001	c0001	t0004	g0001	EAS	KHV	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
HG02015	hp2	a0001	c0001	t0001	g0002	EAS	KHV	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
HG02027	hp1	a0001	c0001	t0001	g0013	EAS	KHV	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
HG02027	hp2	a0001	c0001	t0001	g0021	EAS	KHV	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
HG02055	hp1	a0001	c0001	t0001	g0001	AFR	ACB	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
HG02055	hp2	a0001	c0001	t0001	g0001	AFR	ACB	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
HG02071	hp1	a0001	c0001	t0001	g0001	EAS	KHV	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
HG02071	hp2	a0001	c0001	t0001	g0010	EAS	KHV	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
HG02080	hp1	a0001	c0001	t0001	g0001	EAS	KHV	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
HG02080	hp2	a0001	c0001	t0004	g0001	EAS	KHV	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
HG02083	hp1	a0001	c0001	t0001	g0001	EAS	KHV	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
HG02083	hp2	a0001	c0001	t0001	g0002	EAS	KHV	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
HG02129	hp1	a0001	c0001	t0001	g0002	EAS	KHV	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
HG02129	hp2	a0001	c0001	t0001	g0001	EAS	KHV	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
HG02132	hp1	a0001	c0001	t0001	g0002	EAS	KHV	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
HG02132	hp2	a0001	c0001	t0001	g0001	EAS	KHV	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
HG02145	hp1	a0001	c0001	t0001	g0001	AFR	ACB	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
HG02145	hp2	a0001	c0001	t0001	g0001	AFR	ACB	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
HG02148	hp1	a0001	c0001	t0001	g0028	AMR	PEL	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
HG02148	hp2	a0001	c0001	t0001	g0002	AMR	PEL	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
HG02257	hp1	a0001	c0001	t0001	g0001	AFR	ACB	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
HG02257	hp2	a0001	c0001	t0001	g0002	AFR	ACB	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
HG02258	hp1	a0001	c0001	t0001	g0001	AFR	ACB	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
HG02258	hp2	a0001	c0009	t0001	g0014	AFR	ACB	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
HG02273	hp1	a0001	c0002	t0003	g0006	AMR	PEL	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
HG02273	hp2	a0001	c0001	t0001	g0001	AMR	PEL	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
HG02451	hp1	a0001	c0001	t0001	g0001	AFR	ACB	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
HG02451	hp2	a0001	c0002	t0002	g0004	AFR	ACB	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
HG02523	hp1	a0001	c0001	t0001	g0001	EAS	KHV	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
HG02523	hp2	a0001	c0001	t0001	g0002	EAS	KHV	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
HG02572	hp1	a0001	c0001	t0001	g0001	AFR	GWD	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
HG02572	hp2	a0001	c0001	t0001	g0005	AFR	GWD	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
HG02602	hp1	a0001	c0001	t0001	g0001	SAS	PJL	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
HG02602	hp2	a0001	c0001	t0007	g0001	SAS	PJL	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
HG02615	hp1	a0001	c0001	t0001	g0001	AFR	GWD	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
HG02615	hp2	a0001	c0001	t0001	g0001	AFR	GWD	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
HG02622	hp1	a0001	c0002	t0002	g0003	AFR	GWD	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
HG02622	hp2	a0001	c0001	t0001	g0001	AFR	GWD	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
HG02630	hp1	a0001	c0002	t0002	g0004	AFR	GWD	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
HG02630	hp2	a0001	c0002	t0002	g0003	AFR	GWD	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
HG02647	hp1	a0009	c0012	t0001	g0001	AFR	GWD	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
HG02647	hp2	a0001	c0002	t0002	g0004	AFR	GWD	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
HG02683	hp1	a0001	c0001	t0001	g0002	SAS	PJL	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
HG02683	hp2	a0001	c0001	t0001	g0020	SAS	PJL	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
HG02717	hp1	a0001	c0002	t0002	g0003	AFR	GWD	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
HG02717	hp2	a0001	c0001	t0008	g0026	AFR	GWD	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
HG02723	hp1	a0001	c0001	t0012	g0005	AFR	GWD	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
HG02723	hp2	a0001	c0001	t0001	g0001	AFR	GWD	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
HG02735	hp1	a0001	c0001	t0001	g0001	SAS	PJL	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
HG02735	hp2	a0001	c0001	t0001	g0001	SAS	PJL	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
HG02738	hp1	a0001	c0001	t0001	g0001	SAS	PJL	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
HG02738	hp2	a0001	c0001	t0001	g0001	SAS	PJL	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
HG02809	hp1	a0001	c0002	t0002	g0017	AFR	GWD	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
HG02809	hp2	a0001	c0002	t0002	g0004	AFR	GWD	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
HG02818	hp1	a0001	c0001	t0001	g0002	AFR	GWD	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
HG02818	hp2	a0001	c0001	t0001	g0001	AFR	GWD	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
HG02886	hp1	a0001	c0001	t0001	g0001	AFR	GWD	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
HG02886	hp2	a0001	c0002	t0002	g0003	AFR	GWD	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
HG02896	hp1	a0001	c0002	t0002	g0004	AFR	GWD	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
HG02896	hp2	a0001	c0001	t0001	g0005	AFR	GWD	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
HG02897	hp1	a0001	c0002	t0002	g0004	AFR	GWD	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
HG02897	hp2	a0001	c0001	t0001	g0005	AFR	GWD	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
HG02922	hp1	a0001	c0005	t0001	g0015	AFR	ESN	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
HG02922	hp2	a0001	c0002	t0002	g0003	AFR	ESN	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
HG02965	hp1	a0001	c0001	t0001	g0001	AFR	ESN	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
HG02965	hp2	a0001	c0002	t0002	g0003	AFR	ESN	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
HG02970	hp1	a0001	c0001	t0001	g0030	AFR	ESN	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
HG02970	hp2	a0001	c0002	t0002	g0003	AFR	ESN	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
HG02976	hp1	a0001	c0001	t0001	g0001	AFR	ESN	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
HG02976	hp2	a0001	c0002	t0003	g0008	AFR	ESN	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
HG03017	hp1	a0001	c0001	t0001	g0009	SAS	PJL	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
HG03017	hp2	a0001	c0001	t0001	g0001	SAS	PJL	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
HG03041	hp1	a0001	c0002	t0002	g0003	AFR	GWD	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
HG03041	hp2	a0001	c0005	t0001	g0005	AFR	GWD	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
HG03098	hp1	a0004	c0006	t0002	g0003	AFR	MSL	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
HG03098	hp2	a0001	c0001	t0001	g0001	AFR	MSL	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
HG03139	hp1	a0001	c0002	t0002	g0003	AFR	ESN	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
HG03139	hp2	a0003	c0004	t0005	g0005	AFR	ESN	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
HG03209	hp1	a0004	c0006	t0002	g0003	AFR	MSL	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
HG03209	hp2	a0001	c0002	t0003	g0008	AFR	MSL	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
HG03225	hp1	a0001	c0002	t0002	g0004	AFR	MSL	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
HG03225	hp2	a0001	c0001	t0001	g0027	AFR	MSL	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
HG03239	hp1	a0001	c0001	t0001	g0001	SAS	PJL	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
HG03239	hp2	a0001	c0001	t0001	g0002	SAS	PJL	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
HG03453	hp1	a0001	c0001	t0001	g0001	AFR	MSL	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
HG03453	hp2	a0001	c0001	t0001	g0001	AFR	MSL	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
HG03486	hp1	a0001	c0002	t0002	g0003	AFR	MSL	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
HG03486	hp2	a0001	c0001	t0001	g0001	AFR	MSL	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
HG03490	hp1	a0001	c0001	t0001	g0001	SAS	PJL	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
HG03490	hp2	a0001	c0001	t0001	g0002	SAS	PJL	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
HG03491	hp1	a0001	c0001	t0001	g0002	SAS	PJL	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
HG03491	hp2	a0001	c0001	t0001	g0001	SAS	PJL	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
HG03492	hp1	a0001	c0001	t0001	g0002	SAS	PJL	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
HG03492	hp2	a0001	c0001	t0001	g0001	SAS	PJL	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
HG03516	hp1	a0001	c0001	t0001	g0001	AFR	ESN	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
HG03516	hp2	a0001	c0002	t0002	g0003	AFR	ESN	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
HG03540	hp1	a0001	c0001	t0001	g0005	AFR	GWD	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
HG03540	hp2	a0001	c0002	t0002	g0003	AFR	GWD	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
HG03579	hp1	a0003	c0004	t0005	g0005	AFR	MSL	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
HG03579	hp2	a0001	c0002	t0002	g0003	AFR	MSL	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
HG03688	hp1	a0001	c0001	t0001	g0002	SAS	STU	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
HG03688	hp2	a0001	c0001	t0001	g0001	SAS	STU	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
HG03704	hp1	a0001	c0001	t0001	g0002	SAS	PJL	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
HG03704	hp2	a0001	c0001	t0001	g0033	SAS	PJL	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
HG03831	hp1	a0001	c0001	t0007	g0001	SAS	BEB	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
HG03831	hp2	a0001	c0001	t0001	g0001	SAS	BEB	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
HG03834	hp1	a0001	c0002	t0003	g0006	SAS	BEB	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
HG03834	hp2	a0001	c0001	t0001	g0001	SAS	BEB	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
HG03927	hp1	a0001	c0001	t0001	g0001	SAS	BEB	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
HG03927	hp2	a0001	c0001	t0001	g0001	SAS	BEB	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
HG04115	hp1	a0001	c0001	t0001	g0001	SAS	STU	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
HG04115	hp2	a0001	c0001	t0001	g0001	SAS	STU	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
HG04184	hp1	a0001	c0001	t0001	g0001	SAS	BEB	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
HG04184	hp2	a0001	c0001	t0001	g0009	SAS	BEB	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
HG04199	hp1	a0001	c0001	t0001	g0001	SAS	STU	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
HG04199	hp2	a0001	c0001	t0001	g0001	SAS	STU	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
HG04204	hp1	a0001	c0001	t0001	g0001	SAS	STU	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
HG04204	hp2	a0001	c0001	t0014	g0034	SAS	STU	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
HG04228	hp1	a0001	c0001	t0001	g0001	SAS	STU	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
HG04228	hp2	a0001	c0002	t0003	g0006	SAS	STU	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
NA18522	hp1	a0001	c0001	t0001	g0005	AFR	YRI	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
NA18522	hp2	a0001	c0001	t0001	g0023	AFR	YRI	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
NA18612	hp1	a0001	c0007	t0001	g0002	EAS	CHB	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
NA18612	hp2	a0001	c0001	t0009	g0001	EAS	CHB	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
NA18747	hp1	a0001	c0001	t0001	g0001	EAS	CHB	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
NA18747	hp2	a0001	c0001	t0001	g0002	EAS	CHB	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
NA18939	hp1	a0001	c0001	t0001	g0011	EAS	JPT	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
NA18939	hp2	a0001	c0001	t0015	g0002	EAS	JPT	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
NA18940	hp1	a0001	c0001	t0001	g0002	EAS	JPT	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
NA18940	hp2	a0001	c0001	t0001	g0019	EAS	JPT	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
NA18942	hp1	a0001	c0001	t0001	g0018	EAS	JPT	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
NA18942	hp2	a0001	c0001	t0001	g0002	EAS	JPT	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
NA18943	hp1	a0001	c0001	t0001	g0002	EAS	JPT	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
NA18943	hp2	a0001	c0001	t0001	g0001	EAS	JPT	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
NA18944	hp1	a0001	c0001	t0001	g0002	EAS	JPT	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
NA18944	hp2	a0002	c0003	t0001	g0007	EAS	JPT	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
NA18948	hp1	a0007	c0014	t0001	g0001	EAS	JPT	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
NA18948	hp2	a0001	c0001	t0001	g0001	EAS	JPT	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
NA18949	hp1	a0001	c0001	t0001	g0001	EAS	JPT	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
NA18949	hp2	a0001	c0001	t0001	g0002	EAS	JPT	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
NA18952	hp1	a0001	c0001	t0001	g0002	EAS	JPT	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
NA18952	hp2	a0001	c0001	t0001	g0001	EAS	JPT	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
NA18953	hp1	a0001	c0001	t0001	g0001	EAS	JPT	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
NA18953	hp2	a0001	c0001	t0001	g0002	EAS	JPT	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
NA18954	hp1	a0001	c0001	t0001	g0001	EAS	JPT	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
NA18954	hp2	a0001	c0001	t0001	g0001	EAS	JPT	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
NA18957	hp1	a0001	c0001	t0006	g0002	EAS	JPT	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
NA18957	hp2	a0001	c0001	t0001	g0001	EAS	JPT	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
NA18959	hp1	a0001	c0001	t0001	g0001	EAS	JPT	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
NA18959	hp2	a0001	c0001	t0001	g0001	EAS	JPT	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
NA18961	hp1	a0001	c0001	t0001	g0013	EAS	JPT	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
NA18961	hp2	a0001	c0001	t0001	g0002	EAS	JPT	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
NA18962	hp1	a0001	c0001	t0001	g0002	EAS	JPT	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
NA18962	hp2	a0001	c0001	t0001	g0002	EAS	JPT	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
NA18964	hp1	a0001	c0001	t0001	g0001	EAS	JPT	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
NA18964	hp2	a0001	c0001	t0001	g0002	EAS	JPT	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
NA18965	hp1	a0001	c0001	t0001	g0002	EAS	JPT	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
NA18965	hp2	a0001	c0001	t0001	g0025	EAS	JPT	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
NA18966	hp1	a0001	c0001	t0004	g0001	EAS	JPT	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
NA18966	hp2	a0001	c0001	t0001	g0002	EAS	JPT	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
NA18968	hp1	a0001	c0001	t0001	g0002	EAS	JPT	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
NA18968	hp2	a0001	c0001	t0001	g0002	EAS	JPT	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
NA18969	hp1	a0001	c0001	t0001	g0001	EAS	JPT	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
NA18969	hp2	a0001	c0001	t0001	g0002	EAS	JPT	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
NA18970	hp1	a0001	c0001	t0001	g0002	EAS	JPT	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
NA18970	hp2	a0001	c0001	t0001	g0001	EAS	JPT	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
NA18971	hp1	a0001	c0001	t0001	g0002	EAS	JPT	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
NA18971	hp2	a0001	c0001	t0001	g0001	EAS	JPT	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
NA18973	hp1	a0001	c0001	t0001	g0002	EAS	JPT	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
NA18973	hp2	a0001	c0001	t0001	g0001	EAS	JPT	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
NA18975	hp1	a0008	c0013	t0001	g0002	EAS	JPT	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
NA18975	hp2	a0001	c0001	t0001	g0001	EAS	JPT	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
NA18977	hp1	a0001	c0001	t0001	g0001	EAS	JPT	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
NA18977	hp2	a0001	c0001	t0011	g0001	EAS	JPT	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
NA18979	hp1	a0001	c0001	t0004	g0001	EAS	JPT	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
NA18979	hp2	a0001	c0001	t0001	g0001	EAS	JPT	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
NA18980	hp1	a0001	c0001	t0001	g0002	EAS	JPT	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
NA18980	hp2	a0001	c0001	t0001	g0001	EAS	JPT	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
NA18981	hp1	a0001	c0001	t0001	g0011	EAS	JPT	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
NA18981	hp2	a0001	c0001	t0001	g0002	EAS	JPT	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
NA18982	hp1	a0001	c0001	t0001	g0002	EAS	JPT	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
NA18982	hp2	a0001	c0001	t0001	g0001	EAS	JPT	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
NA18984	hp1	a0011	c0008	t0001	g0002	EAS	JPT	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
NA18984	hp2	a0001	c0001	t0001	g0002	EAS	JPT	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
NA18985	hp1	a0001	c0001	t0001	g0002	EAS	JPT	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
NA18985	hp2	a0001	c0015	t0001	g0002	EAS	JPT	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
NA18986	hp1	a0001	c0001	t0001	g0002	EAS	JPT	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
NA18986	hp2	a0001	c0001	t0004	g0024	EAS	JPT	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
NA18987	hp1	a0001	c0001	t0001	g0002	EAS	JPT	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
NA18987	hp2	a0001	c0001	t0016	g0001	EAS	JPT	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
NA18990	hp1	a0001	c0001	t0004	g0001	EAS	JPT	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
NA18990	hp2	a0001	c0001	t0001	g0002	EAS	JPT	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
NA18992	hp1	a0002	c0003	t0001	g0007	EAS	JPT	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
NA18992	hp2	a0001	c0001	t0001	g0001	EAS	JPT	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
NA18995	hp1	a0001	c0007	t0001	g0002	EAS	JPT	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
NA18995	hp2	a0002	c0003	t0001	g0007	EAS	JPT	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
NA18998	hp1	a0001	c0001	t0001	g0002	EAS	JPT	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
NA18998	hp2	a0001	c0001	t0001	g0001	EAS	JPT	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
NA18999	hp1	a0001	c0001	t0001	g0002	EAS	JPT	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
NA18999	hp2	a0001	c0001	t0001	g0002	EAS	JPT	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
NA19000	hp1	a0001	c0001	t0004	g0001	EAS	JPT	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
NA19000	hp2	a0001	c0001	t0001	g0001	EAS	JPT	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
NA19003	hp1	a0001	c0001	t0001	g0002	EAS	JPT	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
NA19003	hp2	a0001	c0001	t0001	g0001	EAS	JPT	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
NA19005	hp1	a0001	c0001	t0001	g0002	EAS	JPT	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
NA19005	hp2	a0001	c0001	t0001	g0001	EAS	JPT	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
NA19007	hp1	a0001	c0001	t0001	g0001	EAS	JPT	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
NA19007	hp2	a0001	c0001	t0001	g0002	EAS	JPT	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
NA19009	hp1	a0001	c0001	t0001	g0002	EAS	JPT	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
NA19009	hp2	a0001	c0001	t0001	g0001	EAS	JPT	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
NA19010	hp1	a0001	c0001	t0001	g0001	EAS	JPT	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
NA19010	hp2	a0001	c0001	t0001	g0002	EAS	JPT	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
NA19011	hp1	a0001	c0001	t0004	g0001	EAS	JPT	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
NA19011	hp2	a0001	c0001	t0001	g0002	EAS	JPT	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
NA19012	hp1	a0001	c0001	t0001	g0001	EAS	JPT	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
NA19012	hp2	a0001	c0001	t0001	g0001	EAS	JPT	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
NA19030	hp1	a0001	c0002	t0013	g0004	AFR	LWK	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
NA19030	hp2	a0001	c0002	t0002	g0003	AFR	LWK	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
NA19043	hp1	a0001	c0002	t0002	g0004	AFR	LWK	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
NA19043	hp2	a0001	c0001	t0001	g0005	AFR	LWK	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
NA19055	hp1	a0001	c0001	t0001	g0002	EAS	JPT	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
NA19055	hp2	a0001	c0001	t0001	g0002	EAS	JPT	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
NA19059	hp1	a0001	c0001	t0001	g0001	EAS	JPT	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
NA19059	hp2	a0001	c0001	t0004	g0012	EAS	JPT	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
NA19060	hp1	a0001	c0001	t0001	g0001	EAS	JPT	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
NA19060	hp2	a0001	c0001	t0001	g0002	EAS	JPT	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
NA19065	hp1	a0001	c0001	t0001	g0001	EAS	JPT	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
NA19065	hp2	a0001	c0001	t0001	g0002	EAS	JPT	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
NA19066	hp1	a0001	c0001	t0001	g0002	EAS	JPT	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
NA19066	hp2	a0001	c0001	t0004	g0001	EAS	JPT	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
NA19079	hp1	a0001	c0001	t0001	g0001	EAS	JPT	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
NA19079	hp2	a0001	c0001	t0001	g0002	EAS	JPT	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
NA19081	hp1	a0001	c0001	t0004	g0001	EAS	JPT	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
NA19081	hp2	a0001	c0001	t0001	g0001	EAS	JPT	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
NA19085	hp1	a0001	c0001	t0001	g0001	EAS	JPT	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
NA19085	hp2	a0001	c0001	t0006	g0002	EAS	JPT	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
NA19087	hp1	a0001	c0001	t0001	g0002	EAS	JPT	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
NA19087	hp2	a0001	c0001	t0001	g0001	EAS	JPT	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
NA19088	hp1	a0001	c0001	t0001	g0002	EAS	JPT	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
NA19088	hp2	a0001	c0001	t0001	g0002	EAS	JPT	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
NA19090	hp1	a0001	c0001	t0004	g0012	EAS	JPT	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
NA19090	hp2	a0001	c0001	t0001	g0002	EAS	JPT	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
NA19091	hp1	a0001	c0001	t0001	g0002	EAS	JPT	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
NA19091	hp2	a0001	c0001	t0001	g0001	EAS	JPT	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
NA19240	hp1	a0001	c0001	t0001	g0001	AFR	YRI	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
NA19240	hp2	a0005	c0016	t0001	g0001	AFR	YRI	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
NA20129	hp1	a0001	c0002	t0002	g0003	AFR	ASW	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
NA20129	hp2	a0001	c0002	t0002	g0004	AFR	ASW	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
NA20752	hp1	a0001	c0001	t0001	g0002	EUR	TSI	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
NA20752	hp2	a0001	c0001	t0001	g0001	EUR	TSI	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
NA20805	hp1	a0001	c0001	t0001	g0001	EUR	TSI	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
NA20805	hp2	a0002	c0003	t0010	g0007	EUR	TSI	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
NA20905	hp1	a0001	c0001	t0001	g0002	SAS	GIH	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
NA20905	hp2	a0001	c0001	t0001	g0001	SAS	GIH	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
HG01123	hp1	a0001	c0001	t0001	g0002	AMR	CLM	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
HG01123	hp2	a0001	c0002	t0003	g0006	AMR	CLM	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
HG02109	hp1	a0001	c0001	t0001	g0002	AFR	ACB	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
HG02109	hp2	a0001	c0002	t0002	g0004	AFR	ACB	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
HG02486	hp1	a0001	c0002	t0002	g0003	AFR	ACB	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
HG02486	hp2	a0001	c0001	t0001	g0029	AFR	ACB	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
HG02559	hp1	a0001	c0002	t0003	g0008	AFR	ACB	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
HG02559	hp2	a0001	c0005	t0001	g0015	AFR	ACB	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
HG03471	hp1	a0001	c0002	t0002	g0004	AFR	MSL	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
HG03471	hp2	a0001	c0002	t0002	g0004	AFR	MSL	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
HG06807	hp1	a0001	c0001	t0001	g0001	AFR	USA	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
HG06807	hp2	a0001	c0001	t0001	g0031	AFR	USA	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
NA21309	hp1	a0001	c0002	t0002	g0003	AFR	LWK	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
NA21309	hp2	a0001	c0001	t0001	g0001	AFR	LWK	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
homoSapiens_chm13v2	hp1	a0001	c0001	t0001	g0001	REF	REF	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257
homoSapiens_grch38	hp1	a0001	c0001	t0001	g0001	REF	REF	GLYCTK_chr3_52282828_52300257	GLYCTK	chr3	52282828	52300257

chr:pos	ref	alt	# # of ahapid:amino-acid(protein) level	ahapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	hgvs_p	genename	geneid	featuretype	featureid	transcript_biotype	rank	cdna cdna pos length	cds cds pos length	aa aa pos length	chr	pos
chr3:52290421	C C	T T	1	a0005 a0005	1	NA19240.hp2 NA19240.hp2	missense_variant	MODERATE	c.79C>T c.79C>T	p.Arg27Cys p.Arg27Cys	GLYCTK	ENSG00000168237.18	transcript	ENST00000436784.7	protein_coding	2/5	167/3791	79/1572	27/523	chr3	52290421
chr3:52291027	C C	A A	1	a0011 a0011	1	NA18984.hp1 NA18984.hp1	missense_variant	MODERATE	c.445C>A c.445C>A	p.Arg149Ser p.Arg149Ser	GLYCTK	ENSG00000168237.18	transcript	ENST00000436784.7	protein_coding	3/5	533/3791	445/1572	149/523	chr3	52291027
chr3:52291090	C C	G G	1	a0002 a0002	8	HG00735.hp1 HG01081.hp1 HG01192.hp2 others(5): Show HG00735.hp1 HG01081.hp1 HG01192.hp2 HG01255.hp1 NA18944.hp2 NA18992.hp1 NA18995.hp2 NA20805.hp2	missense_variant	MODERATE	c.508C>G c.508C>G	p.Leu170Val p.Leu170Val	GLYCTK	ENSG00000168237.18	transcript	ENST00000436784.7	protein_coding	3/5	596/3791	508/1572	170/523	chr3	52291090
chr3:52291770	G G	A A	1	a0010 a0010	1	HG00438.hp2 HG00438.hp2	missense_variant	MODERATE	c.553G>A c.553G>A	p.Ala185Thr p.Ala185Thr	GLYCTK	ENSG00000168237.18	transcript	ENST00000436784.7	protein_coding	4/5	641/3791	553/1572	185/523	chr3	52291770
chr3:52292735	C C	T T	1	a0006 a0006	1	HG01891.hp1 HG01891.hp1	missense_variant	MODERATE	c.1181C>T c.1181C>T	p.Thr394Ile p.Thr394Ile	GLYCTK	ENSG00000168237.18	transcript	ENST00000436784.7	protein_coding	5/5	1269/3791	1181/1572	394/523	chr3	52292735
chr3:52292848	G G	A A	1	a0009 a0009	1	HG02647.hp1 HG02647.hp1	missense_variant	MODERATE	c.1294G>A c.1294G>A	p.Ala432Thr p.Ala432Thr	GLYCTK	ENSG00000168237.18	transcript	ENST00000436784.7	protein_coding	5/5	1382/3791	1294/1572	432/523	chr3	52292848
chr3:52292951	C C	T T	1	a0004 a0004	2	HG03098.hp1 HG03209.hp1 HG03098.hp1 HG03209.hp1	missense_variant	MODERATE	c.1397C>T c.1397C>T	p.Thr466Ile p.Thr466Ile	GLYCTK	ENSG00000168237.18	transcript	ENST00000436784.7	protein_coding	5/5	1485/3791	1397/1572	466/523	chr3	52292951
chr3:52292968	C C	G G	1	a0007 a0007	1	NA18948.hp1 NA18948.hp1	missense_variant	MODERATE	c.1414C>G c.1414C>G	p.Gln472Glu p.Gln472Glu	GLYCTK	ENSG00000168237.18	transcript	ENST00000436784.7	protein_coding	5/5	1502/3791	1414/1572	472/523	chr3	52292968
chr3:52293022	C C	T T	1	a0003 a0003	3	HG01243.hp2 HG03139.hp2 HG03579.hp1 HG01243.hp2 HG03139.hp2 HG03579.hp1	missense_variant	MODERATE	c.1468C>T c.1468C>T	p.His490Tyr p.His490Tyr	GLYCTK	ENSG00000168237.18	transcript	ENST00000436784.7	protein_coding	5/5	1556/3791	1468/1572	490/523	chr3	52293022
chr3:52293121	C C	T T	1	a0008 a0008	1	NA18975.hp1 NA18975.hp1	missense_variant	MODERATE	c.1567C>T c.1567C>T	p.Arg523Trp p.Arg523Trp	GLYCTK	ENSG00000168237.18	transcript	ENST00000436784.7	protein_coding	5/5	1655/3791	1567/1572	523/523	chr3	52293121

chr:pos	ref	alt	# # of chapid	chapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	hgvs_p	genename	geneid	featuretype	featureid	transcript_biotype	rank	cdna cdna pos length	cds cds pos length	aa aa pos length	chr	pos
chr3:52290363	C C	T T	1	a0001c0007 a0001c0007	2	NA18612.hp1 NA18995.hp1 NA18612.hp1 NA18995.hp1	synonymous_variant	LOW	c.21C>T c.21C>T	p.Val7Val p.Val7Val	GLYCTK	ENSG00000168237.18	transcript	ENST00000436784.7	protein_coding	2/5	109/3791	21/1572	7/523	chr3	52290363
chr3:52290978	A A	C C	1	a0001c0015 a0001c0015	1	NA18985.hp2 NA18985.hp2	synonymous_variant	LOW	c.396A>C c.396A>C	p.Pro132Pro p.Pro132Pro	GLYCTK	ENSG00000168237.18	transcript	ENST00000436784.7	protein_coding	3/5	484/3791	396/1572	132/523	chr3	52290978
chr3:52291023	G G	A A	2	a0001c0002 a0004c0006 a0001c0002 a0004c0006	51	HG00639.hp1 HG00733.hp2 HG00741.hp1 others(48): Show HG00639.hp1 HG00733.hp2 HG00741.hp1 HG01069.hp2 HG01123.hp2 HG01243.hp1 HG01361.hp2 HG01515.hp1 HG01515.hp2 HG01517.hp2 HG01884.hp2 HG01934.hp1 HG02109.hp2 HG02273.hp1 HG02451.hp2 HG02486.hp1 HG02559.hp1 HG02622.hp1 HG02630.hp1 HG02630.hp2 HG02647.hp2 HG02717.hp1 HG02809.hp1 HG02809.hp2 HG02886.hp2 HG02896.hp1 HG02897.hp1 HG02922.hp2 HG02965.hp2 HG02970.hp2 HG02976.hp2 HG03041.hp1 HG03098.hp1 HG03139.hp1 HG03209.hp1 HG03209.hp2 HG03225.hp1 HG03471.hp1 HG03471.hp2 HG03486.hp1 HG03516.hp2 HG03540.hp2 HG03579.hp2 HG03834.hp1 HG04228.hp2 NA19030.hp1 NA19030.hp2 NA19043.hp1 NA20129.hp1 NA20129.hp2 NA21309.hp1	synonymous_variant	LOW	c.441G>A c.441G>A	p.Pro147Pro p.Pro147Pro	GLYCTK	ENSG00000168237.18	transcript	ENST00000436784.7	protein_coding	3/5	529/3791	441/1572	147/523	chr3	52291023
chr3:52291035	G G	A A	2	a0001c0009 a0006c0010 a0001c0009 a0006c0010	2	HG01891.hp1 HG02258.hp2 HG01891.hp1 HG02258.hp2	synonymous_variant	LOW	c.453G>A c.453G>A	p.Ala151Ala p.Ala151Ala	GLYCTK	ENSG00000168237.18	transcript	ENST00000436784.7	protein_coding	3/5	541/3791	453/1572	151/523	chr3	52291035
chr3:52292397	A A	G G	1	a0001c0005 a0001c0005	3	HG02559.hp2 HG02922.hp1 HG03041.hp2 HG02559.hp2 HG02922.hp1 HG03041.hp2	synonymous_variant	LOW	c.843A>G c.843A>G	p.Pro281Pro p.Pro281Pro	GLYCTK	ENSG00000168237.18	transcript	ENST00000436784.7	protein_coding	5/5	931/3791	843/1572	281/523	chr3	52292397

chr:pos	ref	alt	# # of thapid:transcript level	thapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	chr	pos
chr3:52287842	C C	A A	1	a0001c0001t0008 a0001c0001t0008	1	HG02717.hp2 HG02717.hp2	5_prime_UTR_variant	MODIFIER	c.-74C>A c.-74C>A	GLYCTK	ENSG00000168237.18	transcript	ENST00000436784.7	protein_coding	1/5	2501	chr3	52287842
chr3:52293278	G G	A A	2	a0001c0001t0004 a0001c0001t0009 a0001c0001t0004 a0001c0001t0009	13	HG02015.hp1 HG02080.hp2 NA18612.hp2 others(10): Show HG02015.hp1 HG02080.hp2 NA18612.hp2 NA18966.hp1 NA18979.hp1 NA18986.hp2 NA18990.hp1 NA19000.hp1 NA19011.hp1 NA19059.hp2 NA19066.hp2 NA19081.hp1 NA19090.hp1	3_prime_UTR_variant	MODIFIER	c.152G>A c.152G>A	GLYCTK	ENSG00000168237.18	transcript	ENST00000436784.7	protein_coding	5/5	152	chr3	52293278
chr3:52293290	T T	C C	1	a0001c0001t0007 a0001c0001t0007	2	HG02602.hp2 HG03831.hp1 HG02602.hp2 HG03831.hp1	3_prime_UTR_variant	MODIFIER	c.164T>C c.164T>C	GLYCTK	ENSG00000168237.18	transcript	ENST00000436784.7	protein_coding	5/5	164	chr3	52293290
chr3:52293292	T T	C C	1	a0001c0001t0006 a0001c0001t0006	3	HG00609.hp2 NA18957.hp1 NA19085.hp2 HG00609.hp2 NA18957.hp1 NA19085.hp2	3_prime_UTR_variant	MODIFIER	c.166T>C c.166T>C	GLYCTK	ENSG00000168237.18	transcript	ENST00000436784.7	protein_coding	5/5	166	chr3	52293292
chr3:52293520	G G	A A	1	a0002c0003t0010 a0002c0003t0010	1	NA20805.hp2 NA20805.hp2	3_prime_UTR_variant	MODIFIER	c.394G>A c.394G>A	GLYCTK	ENSG00000168237.18	transcript	ENST00000436784.7	protein_coding	5/5	394	chr3	52293520
chr3:52293534	G G	A A	2	a0001c0001t0009 a0001c0001t0011 a0001c0001t0009 a0001c0001t0011	2	NA18612.hp2 NA18977.hp2 NA18612.hp2 NA18977.hp2	3_prime_UTR_variant	MODIFIER	c.408G>A c.408G>A	GLYCTK	ENSG00000168237.18	transcript	ENST00000436784.7	protein_coding	5/5	408	chr3	52293534
chr3:52293603	G G	C C	1	a0001c0001t0012 a0001c0001t0012	1	HG02723.hp1 HG02723.hp1	3_prime_UTR_variant	MODIFIER	c.477G>C c.477G>C	GLYCTK	ENSG00000168237.18	transcript	ENST00000436784.7	protein_coding	5/5	477	chr3	52293603
chr3:52293699	A A	G G	1	a0001c0001t0016 a0001c0001t0016	1	NA18987.hp2 NA18987.hp2	3_prime_UTR_variant	MODIFIER	c.573A>G c.573A>G	GLYCTK	ENSG00000168237.18	transcript	ENST00000436784.7	protein_coding	5/5	573	chr3	52293699
chr3:52293761	C C	A A	1	a0001c0002t0013 a0001c0002t0013	1	NA19030.hp1 NA19030.hp1	3_prime_UTR_variant	MODIFIER	c.635C>A c.635C>A	GLYCTK	ENSG00000168237.18	transcript	ENST00000436784.7	protein_coding	5/5	635	chr3	52293761
chr3:52294008	G G	A A	4	a0001c0002t0002 a0001c0002t0003 a0001c0002t0013 others(1): Show a0001c0002t0002 a0001c0002t0003 a0001c0002t0013 a0004c0006t0002	51	HG00639.hp1 HG00733.hp2 HG00741.hp1 others(48): Show HG00639.hp1 HG00733.hp2 HG00741.hp1 HG01069.hp2 HG01123.hp2 HG01243.hp1 HG01361.hp2 HG01515.hp1 HG01515.hp2 HG01517.hp2 HG01884.hp2 HG01934.hp1 HG02109.hp2 HG02273.hp1 HG02451.hp2 HG02486.hp1 HG02559.hp1 HG02622.hp1 HG02630.hp1 HG02630.hp2 HG02647.hp2 HG02717.hp1 HG02809.hp1 HG02809.hp2 HG02886.hp2 HG02896.hp1 HG02897.hp1 HG02922.hp2 HG02965.hp2 HG02970.hp2 HG02976.hp2 HG03041.hp1 HG03098.hp1 HG03139.hp1 HG03209.hp1 HG03209.hp2 HG03225.hp1 HG03471.hp1 HG03471.hp2 HG03486.hp1 HG03516.hp2 HG03540.hp2 HG03579.hp2 HG03834.hp1 HG04228.hp2 NA19030.hp1 NA19030.hp2 NA19043.hp1 NA20129.hp1 NA20129.hp2 NA21309.hp1	3_prime_UTR_variant	MODIFIER	c.882G>A c.882G>A	GLYCTK	ENSG00000168237.18	transcript	ENST00000436784.7	protein_coding	5/5	882	chr3	52294008
chr3:52294517	G G	A A	5	a0001c0001t0014 a0001c0002t0002 a0001c0002t0003 others(2): Show a0001c0001t0014 a0001c0002t0002 a0001c0002t0003 a0001c0002t0013 a0004c0006t0002	52	HG00639.hp1 HG00733.hp2 HG00741.hp1 others(49): Show HG00639.hp1 HG00733.hp2 HG00741.hp1 HG01069.hp2 HG01123.hp2 HG01243.hp1 HG01361.hp2 HG01515.hp1 HG01515.hp2 HG01517.hp2 HG01884.hp2 HG01934.hp1 HG02109.hp2 HG02273.hp1 HG02451.hp2 HG02486.hp1 HG02559.hp1 HG02622.hp1 HG02630.hp1 HG02630.hp2 HG02647.hp2 HG02717.hp1 HG02809.hp1 HG02809.hp2 HG02886.hp2 HG02896.hp1 HG02897.hp1 HG02922.hp2 HG02965.hp2 HG02970.hp2 HG02976.hp2 HG03041.hp1 HG03098.hp1 HG03139.hp1 HG03209.hp1 HG03209.hp2 HG03225.hp1 HG03471.hp1 HG03471.hp2 HG03486.hp1 HG03516.hp2 HG03540.hp2 HG03579.hp2 HG03834.hp1 HG04204.hp2 HG04228.hp2 NA19030.hp1 NA19030.hp2 NA19043.hp1 NA20129.hp1 NA20129.hp2 NA21309.hp1	3_prime_UTR_variant	MODIFIER	c.1391G>A c.1391G>A	GLYCTK	ENSG00000168237.18	transcript	ENST00000436784.7	protein_coding	5/5	1391	chr3	52294517
chr3:52294548	T T	G G	1	a0001c0001t0015 a0001c0001t0015	1	NA18939.hp2 NA18939.hp2	3_prime_UTR_variant	MODIFIER	c.1422T>G c.1422T>G	GLYCTK	ENSG00000168237.18	transcript	ENST00000436784.7	protein_coding	5/5	1422	chr3	52294548
chr3:52294591	C C	T T	1	a0001c0002t0003 a0001c0002t0003	15	HG00639.hp1 HG00733.hp2 HG00741.hp1 others(12): Show HG00639.hp1 HG00733.hp2 HG00741.hp1 HG01069.hp2 HG01123.hp2 HG01361.hp2 HG01515.hp1 HG01515.hp2 HG01517.hp2 HG02273.hp1 HG02559.hp1 HG02976.hp2 HG03209.hp2 HG03834.hp1 HG04228.hp2	3_prime_UTR_variant	MODIFIER	c.1465C>T c.1465C>T	GLYCTK	ENSG00000168237.18	transcript	ENST00000436784.7	protein_coding	5/5	1465	chr3	52294591
chr3:52294827	G G	T T	3	a0001c0001t0005 a0001c0001t0012 a0003c0004t0005 a0001c0001t0005 a0001c0001t0012 a0003c0004t0005	5	HG01243.hp2 HG01884.hp1 HG02723.hp1 others(2): Show HG01243.hp2 HG01884.hp1 HG02723.hp1 HG03139.hp2 HG03579.hp1	3_prime_UTR_variant	MODIFIER	c.1701G>T c.1701G>T	GLYCTK	ENSG00000168237.18	transcript	ENST00000436784.7	protein_coding	5/5	1701	chr3	52294827

chr:pos	ref	alt	# # of ghapid:genebody level	ghapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	genename	geneid	featuretype	featureid	genebody_biotype	rank	status	chr	pos
chr3:52287960	C C	A A	1	a0001c0002t0003g0006 a0001c0002t0003g0006	12	HG00639.hp1 HG00733.hp2 HG00741.hp1 others(9): Show HG00639.hp1 HG00733.hp2 HG00741.hp1 HG01069.hp2 HG01123.hp2 HG01361.hp2 HG01515.hp1 HG01515.hp2 HG01517.hp2 HG02273.hp1 HG03834.hp1 HG04228.hp2	intron_variant	MODIFIER	c.-40+84C>A c.-40+84C>A	GLYCTK	ENSG00000168237.18	transcript	ENST00000436784.7	protein_coding	1/4		chr3	52287960
chr3:52288194	C C	G G	1	a0001c0001t0014g0034 a0001c0001t0014g0034	1	HG04204.hp2 HG04204.hp2	intron_variant	MODIFIER	c.-40+318C>G c.-40+318C>G	GLYCTK	ENSG00000168237.18	transcript	ENST00000436784.7	protein_coding	1/4		chr3	52288194
chr3:52288222	AT AT	A A	3	a0001c0002t0002g0004 a0001c0002t0002g0017 a0001c0002t0013g0004 a0001c0002t0002g0004 a0001c0002t0002g0017 a0001c0002t0013g0004	15	HG01884.hp2 HG02109.hp2 HG02451.hp2 others(12): Show HG01884.hp2 HG02109.hp2 HG02451.hp2 HG02630.hp1 HG02647.hp2 HG02809.hp1 HG02809.hp2 HG02896.hp1 HG02897.hp1 HG03225.hp1 HG03471.hp1 HG03471.hp2 NA19030.hp1 NA19043.hp1 NA20129.hp2	intron_variant	MODIFIER	c.-40+354delT c.-40+354delT	GLYCTK	ENSG00000168237.18	transcript	ENST00000436784.7	protein_coding	1/4	INFO_REALIGN_3_PRIME	chr3	52288222
chr3:52288300	C C	T T	1	a0001c0001t0001g0033 a0001c0001t0001g0033	1	HG03704.hp2 HG03704.hp2	intron_variant	MODIFIER	c.-40+424C>T c.-40+424C>T	GLYCTK	ENSG00000168237.18	transcript	ENST00000436784.7	protein_coding	1/4		chr3	52288300
chr3:52288401	G G	A A	13	a0001c0001t0001g0002 a0001c0001t0001g0009 a0001c0001t0001g0010 others(10): Show a0001c0001t0001g0002 a0001c0001t0001g0009 a0001c0001t0001g0010 a0001c0001t0001g0018 a0001c0001t0001g0019 a0001c0001t0001g0033 a0001c0001t0006g0002 a0001c0001t0015g0002 a0001c0007t0001g0002 a0001c0015t0001g0002 a0008c0013t0001g0002 a0010c0011t0001g0002 a0011c0008t0001g0002	113	HG00323.hp2 HG00438.hp2 HG00544.hp1 others(110): Show HG00323.hp2 HG00438.hp2 HG00544.hp1 HG00558.hp1 HG00597.hp1 HG00609.hp1 HG00609.hp2 HG00621.hp2 HG00642.hp1 HG00673.hp2 HG00733.hp1 HG00738.hp2 HG01070.hp2 HG01071.hp2 HG01099.hp1 HG01099.hp2 HG01106.hp2 HG01123.hp1 HG01169.hp1 HG01192.hp1 HG01257.hp1 HG01258.hp2 HG01261.hp2 HG01358.hp1 HG01361.hp1 HG01433.hp2 HG01516.hp2 HG01517.hp1 HG01943.hp1 HG01952.hp1 HG01978.hp1 HG01981.hp1 HG01993.hp2 HG02015.hp2 HG02071.hp2 HG02083.hp2 HG02109.hp1 HG02129.hp1 HG02132.hp1 HG02148.hp2 HG02257.hp2 HG02523.hp2 HG02683.hp1 HG02818.hp1 HG03017.hp1 HG03239.hp2 HG03490.hp2 HG03491.hp1 HG03492.hp1 HG03688.hp1 HG03704.hp1 HG03704.hp2 HG04184.hp2 NA18612.hp1 NA18747.hp2 NA18939.hp2 NA18940.hp1 NA18940.hp2 NA18942.hp1 NA18942.hp2 NA18943.hp1 NA18944.hp1 NA18949.hp2 NA18952.hp1 NA18953.hp2 NA18957.hp1 NA18961.hp2 NA18962.hp1 NA18962.hp2 NA18964.hp2 NA18965.hp1 NA18966.hp2 NA18968.hp1 NA18968.hp2 NA18969.hp2 NA18970.hp1 NA18971.hp1 NA18973.hp1 NA18975.hp1 NA18980.hp1 NA18981.hp2 NA18982.hp1 NA18984.hp1 NA18984.hp2 NA18985.hp1 NA18985.hp2 NA18986.hp1 NA18987.hp1 NA18990.hp2 NA18995.hp1 NA18998.hp1 NA18999.hp1 NA18999.hp2 NA19003.hp1 NA19005.hp1 NA19007.hp2 NA19009.hp1 NA19010.hp2 NA19011.hp2 NA19055.hp1 NA19055.hp2 NA19060.hp2 NA19065.hp2 NA19066.hp1 NA19079.hp2 NA19085.hp2 NA19087.hp1 NA19088.hp1 NA19088.hp2 NA19090.hp2 NA19091.hp1 NA20752.hp1 NA20905.hp1	intron_variant	MODIFIER	c.-40+525G>A c.-40+525G>A	GLYCTK	ENSG00000168237.18	transcript	ENST00000436784.7	protein_coding	1/4		chr3	52288401
chr3:52288445	G G	A A	1	a0001c0001t0001g0020 a0001c0001t0001g0020	1	HG02683.hp2 HG02683.hp2	intron_variant	MODIFIER	c.-40+569G>A c.-40+569G>A	GLYCTK	ENSG00000168237.18	transcript	ENST00000436784.7	protein_coding	1/4		chr3	52288445
chr3:52288448	G G	A A	1	a0001c0001t0001g0018 a0001c0001t0001g0018	1	NA18942.hp1 NA18942.hp1	intron_variant	MODIFIER	c.-40+572G>A c.-40+572G>A	GLYCTK	ENSG00000168237.18	transcript	ENST00000436784.7	protein_coding	1/4		chr3	52288448
chr3:52288456	C C	T T	1	a0001c0001t0001g0016 a0001c0001t0001g0016	2	HG01175.hp1 HG01257.hp2 HG01175.hp1 HG01257.hp2	intron_variant	MODIFIER	c.-40+580C>T c.-40+580C>T	GLYCTK	ENSG00000168237.18	transcript	ENST00000436784.7	protein_coding	1/4		chr3	52288456
chr3:52288502	G G	A A	1	a0001c0001t0001g0021 a0001c0001t0001g0021	1	HG02027.hp2 HG02027.hp2	intron_variant	MODIFIER	c.-40+626G>A c.-40+626G>A	GLYCTK	ENSG00000168237.18	transcript	ENST00000436784.7	protein_coding	1/4		chr3	52288502
chr3:52288522	A A	C C	1	a0001c0002t0003g0008 a0001c0002t0003g0008	3	HG02559.hp1 HG02976.hp2 HG03209.hp2 HG02559.hp1 HG02976.hp2 HG03209.hp2	intron_variant	MODIFIER	c.-40+646A>C c.-40+646A>C	GLYCTK	ENSG00000168237.18	transcript	ENST00000436784.7	protein_coding	1/4		chr3	52288522
chr3:52288664	G G	A A	3	a0002c0003t0001g0007 a0002c0003t0001g0022 a0002c0003t0010g0007 a0002c0003t0001g0007 a0002c0003t0001g0022 a0002c0003t0010g0007	8	HG00735.hp1 HG01081.hp1 HG01192.hp2 others(5): Show HG00735.hp1 HG01081.hp1 HG01192.hp2 HG01255.hp1 NA18944.hp2 NA18992.hp1 NA18995.hp2 NA20805.hp2	intron_variant	MODIFIER	c.-40+788G>A c.-40+788G>A	GLYCTK	ENSG00000168237.18	transcript	ENST00000436784.7	protein_coding	1/4		chr3	52288664
chr3:52288739	C C	G G	1	a0001c0001t0001g0019 a0001c0001t0001g0019	1	NA18940.hp2 NA18940.hp2	intron_variant	MODIFIER	c.-40+863C>G c.-40+863C>G	GLYCTK	ENSG00000168237.18	transcript	ENST00000436784.7	protein_coding	1/4		chr3	52288739
chr3:52288781	A A	G G	19	a0001c0001t0001g0002 a0001c0001t0001g0005 a0001c0001t0001g0009 others(16): Show a0001c0001t0001g0002 a0001c0001t0001g0005 a0001c0001t0001g0009 a0001c0001t0001g0010 a0001c0001t0001g0018 a0001c0001t0001g0019 a0001c0001t0001g0033 a0001c0001t0005g0032 a0001c0001t0006g0002 a0001c0001t0012g0005 a0001c0001t0015g0002 a0001c0005t0001g0005 a0001c0005t0001g0015 a0001c0007t0001g0002 a0001c0015t0001g0002 a0003c0004t0005g0005 a0008c0013t0001g0002 a0010c0011t0001g0002 a0011c0008t0001g0002	129	HG00323.hp2 HG00438.hp2 HG00544.hp1 others(126): Show HG00323.hp2 HG00438.hp2 HG00544.hp1 HG00558.hp1 HG00597.hp1 HG00609.hp1 HG00609.hp2 HG00621.hp2 HG00642.hp1 HG00673.hp2 HG00733.hp1 HG00738.hp2 HG01070.hp2 HG01071.hp2 HG01074.hp2 HG01099.hp1 HG01099.hp2 HG01106.hp2 HG01123.hp1 HG01169.hp1 HG01192.hp1 HG01243.hp2 HG01257.hp1 HG01258.hp2 HG01261.hp2 HG01358.hp1 HG01361.hp1 HG01433.hp2 HG01516.hp2 HG01517.hp1 HG01884.hp1 HG01891.hp2 HG01943.hp1 HG01952.hp1 HG01978.hp1 HG01981.hp1 HG01993.hp2 HG02015.hp2 HG02071.hp2 HG02083.hp2 HG02109.hp1 HG02129.hp1 HG02132.hp1 HG02148.hp2 HG02257.hp2 HG02523.hp2 HG02559.hp2 HG02572.hp2 HG02683.hp1 HG02723.hp1 HG02818.hp1 HG02896.hp2 HG02897.hp2 HG02922.hp1 HG03017.hp1 HG03041.hp2 HG03139.hp2 HG03239.hp2 HG03490.hp2 HG03491.hp1 HG03492.hp1 HG03540.hp1 HG03579.hp1 HG03688.hp1 HG03704.hp1 HG03704.hp2 HG04184.hp2 NA18522.hp1 NA18612.hp1 NA18747.hp2 NA18939.hp2 NA18940.hp1 NA18940.hp2 NA18942.hp1 NA18942.hp2 NA18943.hp1 NA18944.hp1 NA18949.hp2 NA18952.hp1 NA18953.hp2 NA18957.hp1 NA18961.hp2 NA18962.hp1 NA18962.hp2 NA18964.hp2 NA18965.hp1 NA18966.hp2 NA18968.hp1 NA18968.hp2 NA18969.hp2 NA18970.hp1 NA18971.hp1 NA18973.hp1 NA18975.hp1 NA18980.hp1 NA18981.hp2 NA18982.hp1 NA18984.hp1 NA18984.hp2 NA18985.hp1 NA18985.hp2 NA18986.hp1 NA18987.hp1 NA18990.hp2 NA18995.hp1 NA18998.hp1 NA18999.hp1 NA18999.hp2 NA19003.hp1 NA19005.hp1 NA19007.hp2 NA19009.hp1 NA19010.hp2 NA19011.hp2 NA19043.hp2 NA19055.hp1 NA19055.hp2 NA19060.hp2 NA19065.hp2 NA19066.hp1 NA19079.hp2 NA19085.hp2 NA19087.hp1 NA19088.hp1 NA19088.hp2 NA19090.hp2 NA19091.hp1 NA20752.hp1 NA20905.hp1	intron_variant	MODIFIER	c.-40+905A>G c.-40+905A>G	GLYCTK	ENSG00000168237.18	transcript	ENST00000436784.7	protein_coding	1/4		chr3	52288781
chr3:52288828	C C	G G	1	a0001c0002t0003g0008 a0001c0002t0003g0008	3	HG02559.hp1 HG02976.hp2 HG03209.hp2 HG02559.hp1 HG02976.hp2 HG03209.hp2	intron_variant	MODIFIER	c.-40+952C>G c.-40+952C>G	GLYCTK	ENSG00000168237.18	transcript	ENST00000436784.7	protein_coding	1/4		chr3	52288828
chr3:52288865	C C	T T	1	a0001c0001t0001g0031 a0001c0001t0001g0031	1	HG06807.hp2 HG06807.hp2	intron_variant	MODIFIER	c.-40+989C>T c.-40+989C>T	GLYCTK	ENSG00000168237.18	transcript	ENST00000436784.7	protein_coding	1/4		chr3	52288865
chr3:52289083	C C	T T	1	a0001c0002t0002g0017 a0001c0002t0002g0017	1	HG02809.hp1 HG02809.hp1	intron_variant	MODIFIER	c.-40+1207C>T c.-40+1207C>T	GLYCTK	ENSG00000168237.18	transcript	ENST00000436784.7	protein_coding	1/4		chr3	52289083
chr3:52289093	G G	A A	1	a0001c0001t0001g0023 a0001c0001t0001g0023	1	NA18522.hp2 NA18522.hp2	intron_variant	MODIFIER	c.-39-1211G>A c.-39-1211G>A	GLYCTK	ENSG00000168237.18	transcript	ENST00000436784.7	protein_coding	1/4		chr3	52289093
chr3:52289144	A A	G G	1	a0001c0001t0001g0030 a0001c0001t0001g0030	1	HG02970.hp1 HG02970.hp1	intron_variant	MODIFIER	c.-39-1160A>G c.-39-1160A>G	GLYCTK	ENSG00000168237.18	transcript	ENST00000436784.7	protein_coding	1/4		chr3	52289144
chr3:52289204	T T	C C	1	a0001c0001t0004g0024 a0001c0001t0004g0024	1	NA18986.hp2 NA18986.hp2	intron_variant	MODIFIER	c.-39-1100T>C c.-39-1100T>C	GLYCTK	ENSG00000168237.18	transcript	ENST00000436784.7	protein_coding	1/4		chr3	52289204
chr3:52289327	C C	T T	1	a0001c0001t0005g0032 a0001c0001t0005g0032	1	HG01884.hp1 HG01884.hp1	intron_variant	MODIFIER	c.-39-977C>T c.-39-977C>T	GLYCTK	ENSG00000168237.18	transcript	ENST00000436784.7	protein_coding	1/4		chr3	52289327
chr3:52289328	G G	A A	6	a0001c0002t0002g0003 a0001c0002t0002g0004 a0001c0002t0002g0017 others(3): Show a0001c0002t0002g0003 a0001c0002t0002g0004 a0001c0002t0002g0017 a0001c0002t0003g0006 a0001c0002t0013g0004 a0004c0006t0002g0003	48	HG00639.hp1 HG00733.hp2 HG00741.hp1 others(45): Show HG00639.hp1 HG00733.hp2 HG00741.hp1 HG01069.hp2 HG01123.hp2 HG01243.hp1 HG01361.hp2 HG01515.hp1 HG01515.hp2 HG01517.hp2 HG01884.hp2 HG01934.hp1 HG02109.hp2 HG02273.hp1 HG02451.hp2 HG02486.hp1 HG02622.hp1 HG02630.hp1 HG02630.hp2 HG02647.hp2 HG02717.hp1 HG02809.hp1 HG02809.hp2 HG02886.hp2 HG02896.hp1 HG02897.hp1 HG02922.hp2 HG02965.hp2 HG02970.hp2 HG03041.hp1 HG03098.hp1 HG03139.hp1 HG03209.hp1 HG03225.hp1 HG03471.hp1 HG03471.hp2 HG03486.hp1 HG03516.hp2 HG03540.hp2 HG03579.hp2 HG03834.hp1 HG04228.hp2 NA19030.hp1 NA19030.hp2 NA19043.hp1 NA20129.hp1 NA20129.hp2 NA21309.hp1	intron_variant	MODIFIER	c.-39-976G>A c.-39-976G>A	GLYCTK	ENSG00000168237.18	transcript	ENST00000436784.7	protein_coding	1/4		chr3	52289328
chr3:52289395	C C	T T	1	a0001c0001t0001g0010 a0001c0001t0001g0010	2	HG00609.hp1 HG02071.hp2 HG00609.hp1 HG02071.hp2	intron_variant	MODIFIER	c.-39-909C>T c.-39-909C>T	GLYCTK	ENSG00000168237.18	transcript	ENST00000436784.7	protein_coding	1/4		chr3	52289395
chr3:52289469	C C	G G	1	a0001c0002t0003g0008 a0001c0002t0003g0008	3	HG02559.hp1 HG02976.hp2 HG03209.hp2 HG02559.hp1 HG02976.hp2 HG03209.hp2	intron_variant	MODIFIER	c.-39-835C>G c.-39-835C>G	GLYCTK	ENSG00000168237.18	transcript	ENST00000436784.7	protein_coding	1/4		chr3	52289469
chr3:52290149	C C	T T	3	a0002c0003t0001g0007 a0002c0003t0001g0022 a0002c0003t0010g0007 a0002c0003t0001g0007 a0002c0003t0001g0022 a0002c0003t0010g0007	8	HG00735.hp1 HG01081.hp1 HG01192.hp2 others(5): Show HG00735.hp1 HG01081.hp1 HG01192.hp2 HG01255.hp1 NA18944.hp2 NA18992.hp1 NA18995.hp2 NA20805.hp2	intron_variant	MODIFIER	c.-39-155C>T c.-39-155C>T	GLYCTK	ENSG00000168237.18	transcript	ENST00000436784.7	protein_coding	1/4		chr3	52290149
chr3:52290153	A A	G G	14	a0001c0001t0001g0029 a0001c0001t0014g0034 a0001c0002t0002g0003 others(11): Show a0001c0001t0001g0029 a0001c0001t0014g0034 a0001c0002t0002g0003 a0001c0002t0002g0004 a0001c0002t0002g0017 a0001c0002t0003g0006 a0001c0002t0003g0008 a0001c0002t0013g0004 a0001c0005t0001g0015 a0001c0009t0001g0014 a0002c0003t0001g0007 a0002c0003t0010g0007 a0004c0006t0002g0003 a0006c0010t0001g0014	64	HG00639.hp1 HG00733.hp2 HG00741.hp1 others(61): Show HG00639.hp1 HG00733.hp2 HG00741.hp1 HG01069.hp2 HG01081.hp1 HG01123.hp2 HG01192.hp2 HG01243.hp1 HG01255.hp1 HG01361.hp2 HG01515.hp1 HG01515.hp2 HG01517.hp2 HG01884.hp2 HG01891.hp1 HG01934.hp1 HG02109.hp2 HG02258.hp2 HG02273.hp1 HG02451.hp2 HG02486.hp1 HG02486.hp2 HG02559.hp1 HG02559.hp2 HG02622.hp1 HG02630.hp1 HG02630.hp2 HG02647.hp2 HG02717.hp1 HG02809.hp1 HG02809.hp2 HG02886.hp2 HG02896.hp1 HG02897.hp1 HG02922.hp1 HG02922.hp2 HG02965.hp2 HG02970.hp2 HG02976.hp2 HG03041.hp1 HG03098.hp1 HG03139.hp1 HG03209.hp1 HG03209.hp2 HG03225.hp1 HG03471.hp1 HG03471.hp2 HG03486.hp1 HG03516.hp2 HG03540.hp2 HG03579.hp2 HG03834.hp1 HG04204.hp2 HG04228.hp2 NA18944.hp2 NA18992.hp1 NA18995.hp2 NA19030.hp1 NA19030.hp2 NA19043.hp1 NA20129.hp1 NA20129.hp2 NA20805.hp2 NA21309.hp1	intron_variant	MODIFIER	c.-39-151A>G c.-39-151A>G	GLYCTK	ENSG00000168237.18	transcript	ENST00000436784.7	protein_coding	1/4		chr3	52290153
chr3:52290153	A A	T T	1	a0002c0003t0001g0022 a0002c0003t0001g0022	1	HG00735.hp1 HG00735.hp1	intron_variant	MODIFIER	c.-39-151A>T c.-39-151A>T	GLYCTK	ENSG00000168237.18	transcript	ENST00000436784.7	protein_coding	1/4		chr3	52290153
chr3:52290156	C C	T T	1	a0001c0001t0001g0013 a0001c0001t0001g0013	2	HG02027.hp1 NA18961.hp1 HG02027.hp1 NA18961.hp1	intron_variant	MODIFIER	c.-39-148C>T c.-39-148C>T	GLYCTK	ENSG00000168237.18	transcript	ENST00000436784.7	protein_coding	1/4		chr3	52290156
chr3:52290212	G G	T T	1	a0001c0001t0001g0028 a0001c0001t0001g0028	1	HG02148.hp1 HG02148.hp1	intron_variant	MODIFIER	c.-39-92G>T c.-39-92G>T	GLYCTK	ENSG00000168237.18	transcript	ENST00000436784.7	protein_coding	1/4		chr3	52290212
chr3:52290242	G G	A A	1	a0001c0001t0014g0034 a0001c0001t0014g0034	1	HG04204.hp2 HG04204.hp2	intron_variant	MODIFIER	c.-39-62G>A c.-39-62G>A	GLYCTK	ENSG00000168237.18	transcript	ENST00000436784.7	protein_coding	1/4		chr3	52290242
chr3:52290792	G G	A A	2	a0001c0001t0001g0011 a0001c0001t0001g0025 a0001c0001t0001g0011 a0001c0001t0001g0025	3	NA18939.hp1 NA18965.hp2 NA18981.hp1 NA18939.hp1 NA18965.hp2 NA18981.hp1	intron_variant	MODIFIER	c.377+73G>A c.377+73G>A	GLYCTK	ENSG00000168237.18	transcript	ENST00000436784.7	protein_coding	2/4		chr3	52290792
chr3:52290795	C C	T T	1	a0001c0001t0004g0012 a0001c0001t0004g0012	2	NA19059.hp2 NA19090.hp1 NA19059.hp2 NA19090.hp1	intron_variant	MODIFIER	c.377+76C>T c.377+76C>T	GLYCTK	ENSG00000168237.18	transcript	ENST00000436784.7	protein_coding	2/4		chr3	52290795
chr3:52291172	C C	T T	1	a0001c0001t0001g0027 a0001c0001t0001g0027	1	HG03225.hp2 HG03225.hp2	intron_variant	MODIFIER	c.529+61C>T c.529+61C>T	GLYCTK	ENSG00000168237.18	transcript	ENST00000436784.7	protein_coding	3/4		chr3	52291172
chr3:52291427	G G	A A	1	a0001c0001t0001g0011 a0001c0001t0001g0011	2	NA18939.hp1 NA18981.hp1 NA18939.hp1 NA18981.hp1	intron_variant	MODIFIER	c.529+316G>A c.529+316G>A	GLYCTK	ENSG00000168237.18	transcript	ENST00000436784.7	protein_coding	3/4		chr3	52291427
chr3:52291538	G G	A A	2	a0001c0009t0001g0014 a0006c0010t0001g0014 a0001c0009t0001g0014 a0006c0010t0001g0014	2	HG01891.hp1 HG02258.hp2 HG01891.hp1 HG02258.hp2	intron_variant	MODIFIER	c.530-209G>A c.530-209G>A	GLYCTK	ENSG00000168237.18	transcript	ENST00000436784.7	protein_coding	3/4		chr3	52291538
chr3:52291743	A A	G G	35	a0001c0001t0001g0002 a0001c0001t0001g0005 a0001c0001t0001g0009 others(32): Show a0001c0001t0001g0002 a0001c0001t0001g0005 a0001c0001t0001g0009 a0001c0001t0001g0010 a0001c0001t0001g0018 a0001c0001t0001g0019 a0001c0001t0001g0029 a0001c0001t0001g0031 a0001c0001t0001g0033 a0001c0001t0005g0032 a0001c0001t0006g0002 a0001c0001t0008g0026 a0001c0001t0012g0005 a0001c0001t0014g0034 a0001c0001t0015g0002 a0001c0002t0002g0003 a0001c0002t0002g0004 a0001c0002t0002g0017 a0001c0002t0003g0006 a0001c0002t0003g0008 a0001c0002t0013g0004 a0001c0005t0001g0005 a0001c0005t0001g0015 a0001c0007t0001g0002 a0001c0009t0001g0014 a0001c0015t0001g0002 a0002c0003t0001g0007 a0002c0003t0001g0022 a0002c0003t0010g0007 a0003c0004t0005g0005 a0004c0006t0002g0003 a0006c0010t0001g0014 a0008c0013t0001g0002 a0010c0011t0001g0002 a0011c0008t0001g0002	194	HG00323.hp2 HG00438.hp2 HG00544.hp1 others(191): Show HG00323.hp2 HG00438.hp2 HG00544.hp1 HG00558.hp1 HG00597.hp1 HG00609.hp1 HG00609.hp2 HG00621.hp2 HG00639.hp1 HG00642.hp1 HG00673.hp2 HG00733.hp1 HG00733.hp2 HG00735.hp1 HG00738.hp2 HG00741.hp1 HG01069.hp2 HG01070.hp2 HG01071.hp2 HG01074.hp2 HG01081.hp1 HG01099.hp1 HG01099.hp2 HG01106.hp2 HG01123.hp1 HG01123.hp2 HG01169.hp1 HG01192.hp1 HG01192.hp2 HG01243.hp1 HG01243.hp2 HG01255.hp1 HG01257.hp1 HG01258.hp2 HG01261.hp2 HG01358.hp1 HG01361.hp1 HG01361.hp2 HG01433.hp2 HG01515.hp1 HG01515.hp2 HG01516.hp2 HG01517.hp1 HG01517.hp2 HG01884.hp1 HG01884.hp2 HG01891.hp1 HG01891.hp2 HG01934.hp1 HG01943.hp1 HG01952.hp1 HG01978.hp1 HG01981.hp1 HG01993.hp2 HG02015.hp2 HG02071.hp2 HG02083.hp2 HG02109.hp1 HG02109.hp2 HG02129.hp1 HG02132.hp1 HG02148.hp2 HG02257.hp2 HG02258.hp2 HG02273.hp1 HG02451.hp2 HG02486.hp1 HG02486.hp2 HG02523.hp2 HG02559.hp1 HG02559.hp2 HG02572.hp2 HG02622.hp1 HG02630.hp1 HG02630.hp2 HG02647.hp2 HG02683.hp1 HG02717.hp1 HG02717.hp2 HG02723.hp1 HG02809.hp1 HG02809.hp2 HG02818.hp1 HG02886.hp2 HG02896.hp1 HG02896.hp2 HG02897.hp1 HG02897.hp2 HG02922.hp1 HG02922.hp2 HG02965.hp2 HG02970.hp2 HG02976.hp2 HG03017.hp1 HG03041.hp1 HG03041.hp2 HG03098.hp1 HG03139.hp1 HG03139.hp2 HG03209.hp1 HG03209.hp2 HG03225.hp1 HG03239.hp2 HG03471.hp1 HG03471.hp2 HG03486.hp1 HG03490.hp2 HG03491.hp1 HG03492.hp1 HG03516.hp2 HG03540.hp1 HG03540.hp2 HG03579.hp1 HG03579.hp2 HG03688.hp1 HG03704.hp1 HG03704.hp2 HG03834.hp1 HG04184.hp2 HG04204.hp2 HG04228.hp2 HG06807.hp2 NA18522.hp1 NA18612.hp1 NA18747.hp2 NA18939.hp2 NA18940.hp1 NA18940.hp2 NA18942.hp1 NA18942.hp2 NA18943.hp1 NA18944.hp1 NA18944.hp2 NA18949.hp2 NA18952.hp1 NA18953.hp2 NA18957.hp1 NA18961.hp2 NA18962.hp1 NA18962.hp2 NA18964.hp2 NA18965.hp1 NA18966.hp2 NA18968.hp1 NA18968.hp2 NA18969.hp2 NA18970.hp1 NA18971.hp1 NA18973.hp1 NA18975.hp1 NA18980.hp1 NA18981.hp2 NA18982.hp1 NA18984.hp1 NA18984.hp2 NA18985.hp1 NA18985.hp2 NA18986.hp1 NA18987.hp1 NA18990.hp2 NA18992.hp1 NA18995.hp1 NA18995.hp2 NA18998.hp1 NA18999.hp1 NA18999.hp2 NA19003.hp1 NA19005.hp1 NA19007.hp2 NA19009.hp1 NA19010.hp2 NA19011.hp2 NA19030.hp1 NA19030.hp2 NA19043.hp1 NA19043.hp2 NA19055.hp1 NA19055.hp2 NA19060.hp2 NA19065.hp2 NA19066.hp1 NA19079.hp2 NA19085.hp2 NA19087.hp1 NA19088.hp1 NA19088.hp2 NA19090.hp2 NA19091.hp1 NA20129.hp1 NA20129.hp2 NA20752.hp1 NA20805.hp2 NA20905.hp1 NA21309.hp1	splice_region_variant&intron_variant	LOW	c.530-4A>G c.530-4A>G	GLYCTK	ENSG00000168237.18	transcript	ENST00000436784.7	protein_coding	3/4		chr3	52291743
chr3:52292101	C C	G G	1	a0001c0001t0001g0029 a0001c0001t0001g0029	1	HG02486.hp2 HG02486.hp2	intron_variant	MODIFIER	c.706-159C>G c.706-159C>G	GLYCTK	ENSG00000168237.18	transcript	ENST00000436784.7	protein_coding	4/4		chr3	52292101
chr3:52292121	C C	T T	1	a0001c0001t0001g0009 a0001c0001t0001g0009	2	HG03017.hp1 HG04184.hp2 HG03017.hp1 HG04184.hp2	intron_variant	MODIFIER	c.706-139C>T c.706-139C>T	GLYCTK	ENSG00000168237.18	transcript	ENST00000436784.7	protein_coding	4/4		chr3	52292121

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🧬 JoGo Online Haplotype Explorer GLYCTK_chr3_52282828_52300257

JoGo Local Haplotype Explorer (on iGV) GLYCTK_chr3_52282828_52300257

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🧬 Gene Summary

AAmino acid(protein) Level Haplotype Info (Total: 11)

CCoding Level Haplotype Info (Total: 16)

TTranscript Level Haplotype Info (Total: 16)

GGenebody Level Haplotype Info (Total: 34)

A C AC Level (Amino Acid + Coding) Haplotype Info (Total: 16)

A C T ACT Level (Amino Acid + Coding + Transcript) Haplotype Info (Total: 30)

A C T G ACTG Level (Amino Acid + Coding + Transcript + Genebody) Haplotype Info (Total: 56)

Haplotype Details by Sample (Haploid Level) (Total: 366)

AAmino acid(protein) Level Haplotype Related Variants (Effect to Protein Coding Variants) (Total: 10)

CCoding Level Variants (Synonymous Mutations) (Total: 5)

TTranscript Level Haplotype Variants (5'UTR+3'UTR) (Total: 14)

GGenebody Level Haplotype Variants (Intron) (Total: 37)

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Annotation (Repeats)

Annotation (SNP Array)