Search by Genic region
Multiple Alignments (by aa haplotype frequency)
Multiple Alignments (by aa haplotype similarity)
| Item | Value |
|---|---|
| geneid | 100132202 |
| ensemblid | ENSG00000227717.5 |
| hgncid | 55711 |
| symbol | GOLGA6L25 |
| name | golgin A6 family like 25 |
| refseq_nuc | NM_001365373.2 |
| refseq_prot | NP_001352302.2 |
| ensembl_nuc | ENST00000620691.5 |
| ensembl_prot | ENSP00000484257.2 |
| mane_status | MANE Select |
| chr | chr15 |
| start | 28553568 |
| end | 28563779 |
| strand | + |
| ver | v1.2 |
| region | chr15:28553568-28563779 |
| region5000 | chr15:28548568-28568779 |
| regionname0 | GOLGA6L25_chr15_28553568_28563779 |
| regionname5000 | GOLGA6L25_chr15_28548568_28568779 |
| ahapid | grch38/chm13v2 | alen | total | AFR | AMR | EAS | EUR | SAS | JPT | regionname | genename | aa | chr | start | end |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| a0001 | 0/0 | 826 | 32 | 0 | 15 | 3 | 5 | 9 | 2 | GOLGA6L25_chr15_28548568_28568779 | GOLGA6L25 | MWPQP others(821): Show |
chr15 | 28548568 | 28568779 |
| a0002 | 0/0 | 826 | 18 | 1 | 10 | 0 | 6 | 1 | 0 | GOLGA6L25_chr15_28548568_28568779 | GOLGA6L25 | MWPQP others(821): Show |
chr15 | 28548568 | 28568779 |
| a0003 | 0/0 | 826 | 12 | 2 | 6 | 0 | 1 | 3 | 0 | GOLGA6L25_chr15_28548568_28568779 | GOLGA6L25 | MWPQP others(821): Show |
chr15 | 28548568 | 28568779 |
| a0004 | 0/0 | 826 | 7 | 1 | 3 | 3 | 0 | 0 | 2 | GOLGA6L25_chr15_28548568_28568779 | GOLGA6L25 | MWPQP others(821): Show |
chr15 | 28548568 | 28568779 |
| a0005 | 0/0 | 826 | 5 | 0 | 2 | 0 | 0 | 3 | 0 | GOLGA6L25_chr15_28548568_28568779 | GOLGA6L25 | MWPQP others(821): Show |
chr15 | 28548568 | 28568779 |
| a0006 | 0/0 | 832 | 4 | 0 | 2 | 0 | 2 | 0 | 0 | GOLGA6L25_chr15_28548568_28568779 | GOLGA6L25 | MWPQP others(827): Show |
chr15 | 28548568 | 28568779 |
| a0007 | 0/0 | 826 | 4 | 1 | 0 | 0 | 0 | 3 | 0 | GOLGA6L25_chr15_28548568_28568779 | GOLGA6L25 | MWPQP others(821): Show |
chr15 | 28548568 | 28568779 |
| a0008 | 0/0 | 826 | 3 | 0 | 0 | 2 | 0 | 1 | 2 | GOLGA6L25_chr15_28548568_28568779 | GOLGA6L25 | MWPQP others(821): Show |
chr15 | 28548568 | 28568779 |
| a0009 | 0/0 | 826 | 2 | 0 | 2 | 0 | 0 | 0 | 0 | GOLGA6L25_chr15_28548568_28568779 | GOLGA6L25 | MWPQP others(821): Show |
chr15 | 28548568 | 28568779 |
| a0010 | 0/0 | 850 | 2 | 1 | 0 | 0 | 0 | 1 | 0 | GOLGA6L25_chr15_28548568_28568779 | GOLGA6L25 | MWPQP others(845): Show |
chr15 | 28548568 | 28568779 |
| a0011 | 0/0 | 833 | 2 | 0 | 0 | 2 | 0 | 0 | 2 | GOLGA6L25_chr15_28548568_28568779 | GOLGA6L25 | MWPQP others(828): Show |
chr15 | 28548568 | 28568779 |
| a0012 | 0/0 | 838 | 1 | 0 | 1 | 0 | 0 | 0 | 0 | GOLGA6L25_chr15_28548568_28568779 | GOLGA6L25 | MWPQP others(833): Show |
chr15 | 28548568 | 28568779 |
| a0013 | 0/0 | 844 | 1 | 0 | 1 | 0 | 0 | 0 | 0 | GOLGA6L25_chr15_28548568_28568779 | GOLGA6L25 | MWPQP others(839): Show |
chr15 | 28548568 | 28568779 |
| a0014 | 0/0 | 862 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | GOLGA6L25_chr15_28548568_28568779 | GOLGA6L25 | MWPQP others(857): Show |
chr15 | 28548568 | 28568779 |
| a0015 | 0/0 | 820 | 1 | 0 | 0 | 0 | 0 | 1 | 0 | GOLGA6L25_chr15_28548568_28568779 | GOLGA6L25 | MWPQP others(815): Show |
chr15 | 28548568 | 28568779 |
| a0016 | 0/0 | 833 | 1 | 0 | 0 | 0 | 0 | 1 | 0 | GOLGA6L25_chr15_28548568_28568779 | GOLGA6L25 | MWPQP others(828): Show |
chr15 | 28548568 | 28568779 |
| a0017 | 0/0 | 832 | 1 | 0 | 0 | 0 | 0 | 1 | 0 | GOLGA6L25_chr15_28548568_28568779 | GOLGA6L25 | MWPQP others(827): Show |
chr15 | 28548568 | 28568779 |
| a0018 | 0/0 | 826 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | GOLGA6L25_chr15_28548568_28568779 | GOLGA6L25 | MWPQP others(821): Show |
chr15 | 28548568 | 28568779 |
| achapid | grch38/chm13v2 | alen | clen | total | AFR | AMR | EAS | EUR | SAS | regionname | genename | aseq | cseq | chr | start | end |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| a0001c0002 | 0/0 | 2478 | 17 | 0 | 7 | 3 | 2 | 5 | GOLGA6L25_chr15_28548568_28568779 | GOLGA6L25 | ATGTG others(2473): Show |
chr15 | 28548568 | 28568779 | ||
| a0001c0003 | 0/0 | 2478 | 14 | 0 | 7 | 0 | 3 | 4 | GOLGA6L25_chr15_28548568_28568779 | GOLGA6L25 | ATGTG others(2473): Show |
chr15 | 28548568 | 28568779 | ||
| a0001c0025 | 0/0 | 2478 | 1 | 0 | 1 | 0 | 0 | 0 | GOLGA6L25_chr15_28548568_28568779 | GOLGA6L25 | ATGTG others(2473): Show |
chr15 | 28548568 | 28568779 | ||
| a0002c0001 | 0/0 | 2478 | 18 | 1 | 10 | 0 | 6 | 1 | GOLGA6L25_chr15_28548568_28568779 | GOLGA6L25 | ATGTG others(2473): Show |
chr15 | 28548568 | 28568779 | ||
| a0003c0004 | 0/0 | 2478 | 7 | 1 | 2 | 0 | 1 | 3 | GOLGA6L25_chr15_28548568_28568779 | GOLGA6L25 | ATGTG others(2473): Show |
chr15 | 28548568 | 28568779 | ||
| a0003c0008 | 0/0 | 2478 | 4 | 0 | 4 | 0 | 0 | 0 | GOLGA6L25_chr15_28548568_28568779 | GOLGA6L25 | ATGTG others(2473): Show |
chr15 | 28548568 | 28568779 | ||
| a0003c0024 | 0/0 | 2478 | 1 | 1 | 0 | 0 | 0 | 0 | GOLGA6L25_chr15_28548568_28568779 | GOLGA6L25 | ATGTG others(2473): Show |
chr15 | 28548568 | 28568779 | ||
| a0004c0007 | 0/0 | 2478 | 4 | 0 | 1 | 3 | 0 | 0 | GOLGA6L25_chr15_28548568_28568779 | GOLGA6L25 | ATGTG others(2473): Show |
chr15 | 28548568 | 28568779 | ||
| a0004c0011 | 0/0 | 2478 | 2 | 0 | 2 | 0 | 0 | 0 | GOLGA6L25_chr15_28548568_28568779 | GOLGA6L25 | ATGTG others(2473): Show |
chr15 | 28548568 | 28568779 | ||
| a0004c0019 | 0/0 | 2478 | 1 | 1 | 0 | 0 | 0 | 0 | GOLGA6L25_chr15_28548568_28568779 | GOLGA6L25 | ATGTG others(2473): Show |
chr15 | 28548568 | 28568779 | ||
| a0005c0005 | 0/0 | 2478 | 5 | 0 | 2 | 0 | 0 | 3 | GOLGA6L25_chr15_28548568_28568779 | GOLGA6L25 | ATGTG others(2473): Show |
chr15 | 28548568 | 28568779 | ||
| a0006c0006 | 0/0 | 2496 | 4 | 0 | 2 | 0 | 2 | 0 | GOLGA6L25_chr15_28548568_28568779 | GOLGA6L25 | ATGTG others(2491): Show |
chr15 | 28548568 | 28568779 | ||
| a0007c0009 | 0/0 | 2478 | 4 | 1 | 0 | 0 | 0 | 3 | GOLGA6L25_chr15_28548568_28568779 | GOLGA6L25 | ATGTG others(2473): Show |
chr15 | 28548568 | 28568779 | ||
| a0008c0010 | 0/0 | 2478 | 3 | 0 | 0 | 2 | 0 | 1 | GOLGA6L25_chr15_28548568_28568779 | GOLGA6L25 | ATGTG others(2473): Show |
chr15 | 28548568 | 28568779 | ||
| a0009c0020 | 0/0 | 2478 | 1 | 0 | 1 | 0 | 0 | 0 | GOLGA6L25_chr15_28548568_28568779 | GOLGA6L25 | ATGTG others(2473): Show |
chr15 | 28548568 | 28568779 | ||
| a0009c0022 | 0/0 | 2478 | 1 | 0 | 1 | 0 | 0 | 0 | GOLGA6L25_chr15_28548568_28568779 | GOLGA6L25 | ATGTG others(2473): Show |
chr15 | 28548568 | 28568779 | ||
| a0010c0012 | 0/0 | 2550 | 2 | 1 | 0 | 0 | 0 | 1 | GOLGA6L25_chr15_28548568_28568779 | GOLGA6L25 | ATGTG others(2545): Show |
chr15 | 28548568 | 28568779 | ||
| a0011c0013 | 0/0 | 2499 | 2 | 0 | 0 | 2 | 0 | 0 | GOLGA6L25_chr15_28548568_28568779 | GOLGA6L25 | ATGTG others(2494): Show |
chr15 | 28548568 | 28568779 | ||
| a0012c0017 | 0/0 | 2514 | 1 | 0 | 1 | 0 | 0 | 0 | GOLGA6L25_chr15_28548568_28568779 | GOLGA6L25 | ATGTG others(2509): Show |
chr15 | 28548568 | 28568779 | ||
| a0013c0016 | 0/0 | 2532 | 1 | 0 | 1 | 0 | 0 | 0 | GOLGA6L25_chr15_28548568_28568779 | GOLGA6L25 | ATGTG others(2527): Show |
chr15 | 28548568 | 28568779 | ||
| a0014c0015 | 0/0 | 2586 | 1 | 1 | 0 | 0 | 0 | 0 | GOLGA6L25_chr15_28548568_28568779 | GOLGA6L25 | ATGTG others(2581): Show |
chr15 | 28548568 | 28568779 | ||
| a0015c0014 | 0/0 | 2460 | 1 | 0 | 0 | 0 | 0 | 1 | GOLGA6L25_chr15_28548568_28568779 | GOLGA6L25 | ATGTG others(2455): Show |
chr15 | 28548568 | 28568779 | ||
| a0016c0021 | 0/0 | 2499 | 1 | 0 | 0 | 0 | 0 | 1 | GOLGA6L25_chr15_28548568_28568779 | GOLGA6L25 | ATGTG others(2494): Show |
chr15 | 28548568 | 28568779 | ||
| a0017c0018 | 0/0 | 2496 | 1 | 0 | 0 | 0 | 0 | 1 | GOLGA6L25_chr15_28548568_28568779 | GOLGA6L25 | ATGTG others(2491): Show |
chr15 | 28548568 | 28568779 | ||
| a0018c0023 | 0/0 | 2478 | 1 | 1 | 0 | 0 | 0 | 0 | GOLGA6L25_chr15_28548568_28568779 | GOLGA6L25 | ATGTG others(2473): Show |
chr15 | 28548568 | 28568779 |
| acthapid | grch38chm13v2 | tlen | total | AFR | AMR | EAS | EUR | SAS | regionname | genename | tseq | chr | start | end |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| a0001c0002t0001 | 0/0 | 4286 | 11 | 0 | 6 | 3 | 0 | 2 | GOLGA6L25_chr15_28548568_28568779 | GOLGA6L25 | AGTCA others(4281): Show |
chr15 | 28548568 | 28568779 |
| a0001c0002t0002 | 0/0 | 4286 | 3 | 0 | 1 | 0 | 2 | 0 | GOLGA6L25_chr15_28548568_28568779 | GOLGA6L25 | AGTCA others(4281): Show |
chr15 | 28548568 | 28568779 |
| a0001c0002t0003 | 0/0 | 4285 | 2 | 0 | 0 | 0 | 0 | 2 | GOLGA6L25_chr15_28548568_28568779 | GOLGA6L25 | AGTCA others(4280): Show |
chr15 | 28548568 | 28568779 |
| a0001c0002t0008 | 0/0 | 4286 | 1 | 0 | 0 | 0 | 0 | 1 | GOLGA6L25_chr15_28548568_28568779 | GOLGA6L25 | AGTCA others(4281): Show |
chr15 | 28548568 | 28568779 |
| a0001c0003t0001 | 0/0 | 4286 | 14 | 0 | 7 | 0 | 3 | 4 | GOLGA6L25_chr15_28548568_28568779 | GOLGA6L25 | AGTCA others(4281): Show |
chr15 | 28548568 | 28568779 |
| a0001c0025t0001 | 0/0 | 4286 | 1 | 0 | 1 | 0 | 0 | 0 | GOLGA6L25_chr15_28548568_28568779 | GOLGA6L25 | AGTCA others(4281): Show |
chr15 | 28548568 | 28568779 |
| a0002c0001t0003 | 0/0 | 4285 | 18 | 1 | 10 | 0 | 6 | 1 | GOLGA6L25_chr15_28548568_28568779 | GOLGA6L25 | AGTCA others(4280): Show |
chr15 | 28548568 | 28568779 |
| a0003c0004t0002 | 0/0 | 4286 | 3 | 1 | 0 | 0 | 0 | 2 | GOLGA6L25_chr15_28548568_28568779 | GOLGA6L25 | AGTCA others(4281): Show |
chr15 | 28548568 | 28568779 |
| a0003c0004t0004 | 0/0 | 4286 | 2 | 0 | 1 | 0 | 1 | 0 | GOLGA6L25_chr15_28548568_28568779 | GOLGA6L25 | AGTCA others(4281): Show |
chr15 | 28548568 | 28568779 |
| a0003c0004t0005 | 0/0 | 4286 | 2 | 0 | 1 | 0 | 0 | 1 | GOLGA6L25_chr15_28548568_28568779 | GOLGA6L25 | AGTCA others(4281): Show |
chr15 | 28548568 | 28568779 |
| a0003c0008t0002 | 0/0 | 4286 | 4 | 0 | 4 | 0 | 0 | 0 | GOLGA6L25_chr15_28548568_28568779 | GOLGA6L25 | AGTCA others(4281): Show |
chr15 | 28548568 | 28568779 |
| a0003c0024t0002 | 0/0 | 4286 | 1 | 1 | 0 | 0 | 0 | 0 | GOLGA6L25_chr15_28548568_28568779 | GOLGA6L25 | AGTCA others(4281): Show |
chr15 | 28548568 | 28568779 |
| a0004c0007t0001 | 0/0 | 4286 | 3 | 0 | 0 | 3 | 0 | 0 | GOLGA6L25_chr15_28548568_28568779 | GOLGA6L25 | AGTCA others(4281): Show |
chr15 | 28548568 | 28568779 |
| a0004c0007t0002 | 0/0 | 4286 | 1 | 0 | 1 | 0 | 0 | 0 | GOLGA6L25_chr15_28548568_28568779 | GOLGA6L25 | AGTCA others(4281): Show |
chr15 | 28548568 | 28568779 |
| a0004c0011t0002 | 0/0 | 4286 | 1 | 0 | 1 | 0 | 0 | 0 | GOLGA6L25_chr15_28548568_28568779 | GOLGA6L25 | AGTCA others(4281): Show |
chr15 | 28548568 | 28568779 |
| a0004c0011t0004 | 0/0 | 4286 | 1 | 0 | 1 | 0 | 0 | 0 | GOLGA6L25_chr15_28548568_28568779 | GOLGA6L25 | AGTCA others(4281): Show |
chr15 | 28548568 | 28568779 |
| a0004c0019t0002 | 0/0 | 4286 | 1 | 1 | 0 | 0 | 0 | 0 | GOLGA6L25_chr15_28548568_28568779 | GOLGA6L25 | AGTCA others(4281): Show |
chr15 | 28548568 | 28568779 |
| a0005c0005t0001 | 0/0 | 4286 | 4 | 0 | 1 | 0 | 0 | 3 | GOLGA6L25_chr15_28548568_28568779 | GOLGA6L25 | AGTCA others(4281): Show |
chr15 | 28548568 | 28568779 |
| a0005c0005t0006 | 0/0 | 4286 | 1 | 0 | 1 | 0 | 0 | 0 | GOLGA6L25_chr15_28548568_28568779 | GOLGA6L25 | AGTCA others(4281): Show |
chr15 | 28548568 | 28568779 |
| a0006c0006t0001 | 0/0 | 4304 | 4 | 0 | 2 | 0 | 2 | 0 | GOLGA6L25_chr15_28548568_28568779 | GOLGA6L25 | AGTCA others(4299): Show |
chr15 | 28548568 | 28568779 |
| a0007c0009t0002 | 0/0 | 4286 | 4 | 1 | 0 | 0 | 0 | 3 | GOLGA6L25_chr15_28548568_28568779 | GOLGA6L25 | AGTCA others(4281): Show |
chr15 | 28548568 | 28568779 |
| a0008c0010t0004 | 0/0 | 4286 | 3 | 0 | 0 | 2 | 0 | 1 | GOLGA6L25_chr15_28548568_28568779 | GOLGA6L25 | AGTCA others(4281): Show |
chr15 | 28548568 | 28568779 |
| a0009c0020t0007 | 0/0 | 4285 | 1 | 0 | 1 | 0 | 0 | 0 | GOLGA6L25_chr15_28548568_28568779 | GOLGA6L25 | AGTCA others(4280): Show |
chr15 | 28548568 | 28568779 |
| a0009c0022t0003 | 0/0 | 4285 | 1 | 0 | 1 | 0 | 0 | 0 | GOLGA6L25_chr15_28548568_28568779 | GOLGA6L25 | AGTCA others(4280): Show |
chr15 | 28548568 | 28568779 |
| a0010c0012t0002 | 0/0 | 4358 | 2 | 1 | 0 | 0 | 0 | 1 | GOLGA6L25_chr15_28548568_28568779 | GOLGA6L25 | AGTCA others(4353): Show |
chr15 | 28548568 | 28568779 |
| a0011c0013t0002 | 0/0 | 4307 | 2 | 0 | 0 | 2 | 0 | 0 | GOLGA6L25_chr15_28548568_28568779 | GOLGA6L25 | AGTCA others(4302): Show |
chr15 | 28548568 | 28568779 |
| a0012c0017t0001 | 0/0 | 4322 | 1 | 0 | 1 | 0 | 0 | 0 | GOLGA6L25_chr15_28548568_28568779 | GOLGA6L25 | AGTCA others(4317): Show |
chr15 | 28548568 | 28568779 |
| a0013c0016t0002 | 0/0 | 4340 | 1 | 0 | 1 | 0 | 0 | 0 | GOLGA6L25_chr15_28548568_28568779 | GOLGA6L25 | AGTCA others(4335): Show |
chr15 | 28548568 | 28568779 |
| a0014c0015t0002 | 0/0 | 4394 | 1 | 1 | 0 | 0 | 0 | 0 | GOLGA6L25_chr15_28548568_28568779 | GOLGA6L25 | AGTCA others(4389): Show |
chr15 | 28548568 | 28568779 |
| a0015c0014t0001 | 0/0 | 4268 | 1 | 0 | 0 | 0 | 0 | 1 | GOLGA6L25_chr15_28548568_28568779 | GOLGA6L25 | AGTCA others(4263): Show |
chr15 | 28548568 | 28568779 |
| a0016c0021t0003 | 0/0 | 4306 | 1 | 0 | 0 | 0 | 0 | 1 | GOLGA6L25_chr15_28548568_28568779 | GOLGA6L25 | AGTCA others(4301): Show |
chr15 | 28548568 | 28568779 |
| a0017c0018t0003 | 0/0 | 4303 | 1 | 0 | 0 | 0 | 0 | 1 | GOLGA6L25_chr15_28548568_28568779 | GOLGA6L25 | AGTCA others(4298): Show |
chr15 | 28548568 | 28568779 |
| a0018c0023t0003 | 0/0 | 4285 | 1 | 1 | 0 | 0 | 0 | 0 | GOLGA6L25_chr15_28548568_28568779 | GOLGA6L25 | AGTCA others(4280): Show |
chr15 | 28548568 | 28568779 |
| actghapid | grch38/chm13v2 | total | AFR | AMR | EAS | EUR | SAS | regionname | genename | chr | start | end |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| a0001c0002t0001g0001 | 0/0 | 4 | 0 | 3 | 0 | 0 | 1 | GOLGA6L25_chr15_28548568_28568779 | GOLGA6L25 | chr15 | 28548568 | 28568779 |
| a0001c0002t0001g0004 | 0/0 | 3 | 0 | 0 | 3 | 0 | 0 | GOLGA6L25_chr15_28548568_28568779 | GOLGA6L25 | chr15 | 28548568 | 28568779 |
| a0001c0002t0001g0015 | 0/0 | 2 | 0 | 2 | 0 | 0 | 0 | GOLGA6L25_chr15_28548568_28568779 | GOLGA6L25 | chr15 | 28548568 | 28568779 |
| a0001c0002t0001g0028 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | GOLGA6L25_chr15_28548568_28568779 | GOLGA6L25 | chr15 | 28548568 | 28568779 |
| a0001c0002t0001g0033 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | GOLGA6L25_chr15_28548568_28568779 | GOLGA6L25 | chr15 | 28548568 | 28568779 |
| a0001c0002t0002g0009 | 0/0 | 1 | 0 | 0 | 0 | 1 | 0 | GOLGA6L25_chr15_28548568_28568779 | GOLGA6L25 | chr15 | 28548568 | 28568779 |
| a0001c0002t0002g0013 | 0/0 | 1 | 0 | 0 | 0 | 1 | 0 | GOLGA6L25_chr15_28548568_28568779 | GOLGA6L25 | chr15 | 28548568 | 28568779 |
| a0001c0002t0002g0030 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | GOLGA6L25_chr15_28548568_28568779 | GOLGA6L25 | chr15 | 28548568 | 28568779 |
| a0001c0002t0003g0012 | 0/0 | 2 | 0 | 0 | 0 | 0 | 2 | GOLGA6L25_chr15_28548568_28568779 | GOLGA6L25 | chr15 | 28548568 | 28568779 |
| a0001c0002t0008g0013 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | GOLGA6L25_chr15_28548568_28568779 | GOLGA6L25 | chr15 | 28548568 | 28568779 |
| a0001c0003t0001g0001 | 0/0 | 6 | 0 | 2 | 0 | 3 | 1 | GOLGA6L25_chr15_28548568_28568779 | GOLGA6L25 | chr15 | 28548568 | 28568779 |
| a0001c0003t0001g0005 | 0/0 | 5 | 0 | 3 | 0 | 0 | 2 | GOLGA6L25_chr15_28548568_28568779 | GOLGA6L25 | chr15 | 28548568 | 28568779 |
| a0001c0003t0001g0017 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | GOLGA6L25_chr15_28548568_28568779 | GOLGA6L25 | chr15 | 28548568 | 28568779 |
| a0001c0003t0001g0027 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | GOLGA6L25_chr15_28548568_28568779 | GOLGA6L25 | chr15 | 28548568 | 28568779 |
| a0001c0003t0001g0029 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | GOLGA6L25_chr15_28548568_28568779 | GOLGA6L25 | chr15 | 28548568 | 28568779 |
| a0001c0025t0001g0009 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | GOLGA6L25_chr15_28548568_28568779 | GOLGA6L25 | chr15 | 28548568 | 28568779 |
| a0002c0001t0003g0002 | 0/0 | 11 | 0 | 7 | 0 | 4 | 0 | GOLGA6L25_chr15_28548568_28568779 | GOLGA6L25 | chr15 | 28548568 | 28568779 |
| a0002c0001t0003g0016 | 0/0 | 2 | 0 | 2 | 0 | 0 | 0 | GOLGA6L25_chr15_28548568_28568779 | GOLGA6L25 | chr15 | 28548568 | 28568779 |
| a0002c0001t0003g0034 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | GOLGA6L25_chr15_28548568_28568779 | GOLGA6L25 | chr15 | 28548568 | 28568779 |
| a0002c0001t0003g0035 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | GOLGA6L25_chr15_28548568_28568779 | GOLGA6L25 | chr15 | 28548568 | 28568779 |
| a0002c0001t0003g0036 | 0/0 | 1 | 0 | 0 | 0 | 1 | 0 | GOLGA6L25_chr15_28548568_28568779 | GOLGA6L25 | chr15 | 28548568 | 28568779 |
| a0002c0001t0003g0037 | 0/0 | 1 | 0 | 0 | 0 | 1 | 0 | GOLGA6L25_chr15_28548568_28568779 | GOLGA6L25 | chr15 | 28548568 | 28568779 |
| a0002c0001t0003g0040 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | GOLGA6L25_chr15_28548568_28568779 | GOLGA6L25 | chr15 | 28548568 | 28568779 |
| a0003c0004t0002g0006 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | GOLGA6L25_chr15_28548568_28568779 | GOLGA6L25 | chr15 | 28548568 | 28568779 |
| a0003c0004t0002g0008 | 0/0 | 2 | 0 | 0 | 0 | 0 | 2 | GOLGA6L25_chr15_28548568_28568779 | GOLGA6L25 | chr15 | 28548568 | 28568779 |
| a0003c0004t0004g0007 | 0/0 | 2 | 0 | 1 | 0 | 1 | 0 | GOLGA6L25_chr15_28548568_28568779 | GOLGA6L25 | chr15 | 28548568 | 28568779 |
| a0003c0004t0005g0006 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | GOLGA6L25_chr15_28548568_28568779 | GOLGA6L25 | chr15 | 28548568 | 28568779 |
| a0003c0004t0005g0007 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | GOLGA6L25_chr15_28548568_28568779 | GOLGA6L25 | chr15 | 28548568 | 28568779 |
| a0003c0008t0002g0006 | 0/0 | 2 | 0 | 2 | 0 | 0 | 0 | GOLGA6L25_chr15_28548568_28568779 | GOLGA6L25 | chr15 | 28548568 | 28568779 |
| a0003c0008t0002g0020 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | GOLGA6L25_chr15_28548568_28568779 | GOLGA6L25 | chr15 | 28548568 | 28568779 |
| a0003c0008t0002g0021 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | GOLGA6L25_chr15_28548568_28568779 | GOLGA6L25 | chr15 | 28548568 | 28568779 |
| a0003c0024t0002g0007 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | GOLGA6L25_chr15_28548568_28568779 | GOLGA6L25 | chr15 | 28548568 | 28568779 |
| a0004c0007t0001g0003 | 0/0 | 2 | 0 | 0 | 2 | 0 | 0 | GOLGA6L25_chr15_28548568_28568779 | GOLGA6L25 | chr15 | 28548568 | 28568779 |
| a0004c0007t0001g0024 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | GOLGA6L25_chr15_28548568_28568779 | GOLGA6L25 | chr15 | 28548568 | 28568779 |
| a0004c0007t0002g0025 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | GOLGA6L25_chr15_28548568_28568779 | GOLGA6L25 | chr15 | 28548568 | 28568779 |
| a0004c0011t0002g0003 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | GOLGA6L25_chr15_28548568_28568779 | GOLGA6L25 | chr15 | 28548568 | 28568779 |
| a0004c0011t0004g0026 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | GOLGA6L25_chr15_28548568_28568779 | GOLGA6L25 | chr15 | 28548568 | 28568779 |
| a0004c0019t0002g0022 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | GOLGA6L25_chr15_28548568_28568779 | GOLGA6L25 | chr15 | 28548568 | 28568779 |
| a0005c0005t0001g0001 | 0/0 | 3 | 0 | 0 | 0 | 0 | 3 | GOLGA6L25_chr15_28548568_28568779 | GOLGA6L25 | chr15 | 28548568 | 28568779 |
| a0005c0005t0001g0011 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | GOLGA6L25_chr15_28548568_28568779 | GOLGA6L25 | chr15 | 28548568 | 28568779 |
| a0005c0005t0006g0001 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | GOLGA6L25_chr15_28548568_28568779 | GOLGA6L25 | chr15 | 28548568 | 28568779 |
| a0006c0006t0001g0001 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | GOLGA6L25_chr15_28548568_28568779 | GOLGA6L25 | chr15 | 28548568 | 28568779 |
| a0006c0006t0001g0004 | 0/0 | 2 | 0 | 0 | 0 | 2 | 0 | GOLGA6L25_chr15_28548568_28568779 | GOLGA6L25 | chr15 | 28548568 | 28568779 |
| a0006c0006t0001g0042 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | GOLGA6L25_chr15_28548568_28568779 | GOLGA6L25 | chr15 | 28548568 | 28568779 |
| a0007c0009t0002g0014 | 0/0 | 2 | 0 | 0 | 0 | 0 | 2 | GOLGA6L25_chr15_28548568_28568779 | GOLGA6L25 | chr15 | 28548568 | 28568779 |
| a0007c0009t0002g0031 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | GOLGA6L25_chr15_28548568_28568779 | GOLGA6L25 | chr15 | 28548568 | 28568779 |
| a0007c0009t0002g0032 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | GOLGA6L25_chr15_28548568_28568779 | GOLGA6L25 | chr15 | 28548568 | 28568779 |
| a0008c0010t0004g0010 | 0/0 | 2 | 0 | 0 | 2 | 0 | 0 | GOLGA6L25_chr15_28548568_28568779 | GOLGA6L25 | chr15 | 28548568 | 28568779 |
| a0008c0010t0004g0019 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | GOLGA6L25_chr15_28548568_28568779 | GOLGA6L25 | chr15 | 28548568 | 28568779 |
| a0009c0020t0007g0023 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | GOLGA6L25_chr15_28548568_28568779 | GOLGA6L25 | chr15 | 28548568 | 28568779 |
| a0009c0022t0003g0039 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | GOLGA6L25_chr15_28548568_28568779 | GOLGA6L25 | chr15 | 28548568 | 28568779 |
| a0010c0012t0002g0043 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | GOLGA6L25_chr15_28548568_28568779 | GOLGA6L25 | chr15 | 28548568 | 28568779 |
| a0010c0012t0002g0045 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | GOLGA6L25_chr15_28548568_28568779 | GOLGA6L25 | chr15 | 28548568 | 28568779 |
| a0011c0013t0002g0003 | 0/0 | 2 | 0 | 0 | 2 | 0 | 0 | GOLGA6L25_chr15_28548568_28568779 | GOLGA6L25 | chr15 | 28548568 | 28568779 |
| a0012c0017t0001g0018 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | GOLGA6L25_chr15_28548568_28568779 | GOLGA6L25 | chr15 | 28548568 | 28568779 |
| a0013c0016t0002g0046 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | GOLGA6L25_chr15_28548568_28568779 | GOLGA6L25 | chr15 | 28548568 | 28568779 |
| a0014c0015t0002g0044 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | GOLGA6L25_chr15_28548568_28568779 | GOLGA6L25 | chr15 | 28548568 | 28568779 |
| a0015c0014t0001g0011 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | GOLGA6L25_chr15_28548568_28568779 | GOLGA6L25 | chr15 | 28548568 | 28568779 |
| a0016c0021t0003g0002 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | GOLGA6L25_chr15_28548568_28568779 | GOLGA6L25 | chr15 | 28548568 | 28568779 |
| a0017c0018t0003g0041 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | GOLGA6L25_chr15_28548568_28568779 | GOLGA6L25 | chr15 | 28548568 | 28568779 |
| a0018c0023t0003g0038 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | GOLGA6L25_chr15_28548568_28568779 | GOLGA6L25 | chr15 | 28548568 | 28568779 |
| sampleid | ID haplotypeid
|
ahapid | chapid | thapid | ghapid | gpopname | popname | regionname | genename | chr | start | end |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| HG00099 | hp1 | a0002 | c0001 | t0003 | g0002 | EUR | GBR | GOLGA6L25_chr15_28548568_28568779 | GOLGA6L25 | chr15 | 28548568 | 28568779 |
| HG00099 | hp2 | a0001 | c0002 | t0002 | g0013 | EUR | GBR | GOLGA6L25_chr15_28548568_28568779 | GOLGA6L25 | chr15 | 28548568 | 28568779 |
| HG00140 | hp1 | a0001 | c0003 | t0001 | g0001 | EUR | GBR | GOLGA6L25_chr15_28548568_28568779 | GOLGA6L25 | chr15 | 28548568 | 28568779 |
| HG00140 | hp2 | a0001 | c0003 | t0001 | g0001 | EUR | GBR | GOLGA6L25_chr15_28548568_28568779 | GOLGA6L25 | chr15 | 28548568 | 28568779 |
| HG00323 | hp1 | a0002 | c0001 | t0003 | g0037 | EUR | FIN | GOLGA6L25_chr15_28548568_28568779 | GOLGA6L25 | chr15 | 28548568 | 28568779 |
| HG00323 | hp2 | a0002 | c0001 | t0003 | g0002 | EUR | FIN | GOLGA6L25_chr15_28548568_28568779 | GOLGA6L25 | chr15 | 28548568 | 28568779 |
| HG00639 | hp1 | a0002 | c0001 | t0003 | g0016 | AMR | PUR | GOLGA6L25_chr15_28548568_28568779 | GOLGA6L25 | chr15 | 28548568 | 28568779 |
| HG00639 | hp2 | a0001 | c0002 | t0001 | g0033 | AMR | PUR | GOLGA6L25_chr15_28548568_28568779 | GOLGA6L25 | chr15 | 28548568 | 28568779 |
| HG00642 | hp1 | a0002 | c0001 | t0003 | g0002 | AMR | PUR | GOLGA6L25_chr15_28548568_28568779 | GOLGA6L25 | chr15 | 28548568 | 28568779 |
| HG00642 | hp2 | a0001 | c0003 | t0001 | g0027 | AMR | PUR | GOLGA6L25_chr15_28548568_28568779 | GOLGA6L25 | chr15 | 28548568 | 28568779 |
| HG00735 | hp1 | a0005 | c0005 | t0001 | g0011 | AMR | PUR | GOLGA6L25_chr15_28548568_28568779 | GOLGA6L25 | chr15 | 28548568 | 28568779 |
| HG00735 | hp2 | a0002 | c0001 | t0003 | g0016 | AMR | PUR | GOLGA6L25_chr15_28548568_28568779 | GOLGA6L25 | chr15 | 28548568 | 28568779 |
| HG01069 | hp1 | a0003 | c0004 | t0005 | g0006 | AMR | PUR | GOLGA6L25_chr15_28548568_28568779 | GOLGA6L25 | chr15 | 28548568 | 28568779 |
| HG01069 | hp2 | a0001 | c0002 | t0001 | g0015 | AMR | PUR | GOLGA6L25_chr15_28548568_28568779 | GOLGA6L25 | chr15 | 28548568 | 28568779 |
| HG01071 | hp1 | a0001 | c0002 | t0001 | g0015 | AMR | PUR | GOLGA6L25_chr15_28548568_28568779 | GOLGA6L25 | chr15 | 28548568 | 28568779 |
| HG01071 | hp2 | a0002 | c0001 | t0003 | g0002 | AMR | PUR | GOLGA6L25_chr15_28548568_28568779 | GOLGA6L25 | chr15 | 28548568 | 28568779 |
| HG01074 | hp1 | a0001 | c0003 | t0001 | g0017 | AMR | PUR | GOLGA6L25_chr15_28548568_28568779 | GOLGA6L25 | chr15 | 28548568 | 28568779 |
| HG01074 | hp2 | a0006 | c0006 | t0001 | g0042 | AMR | PUR | GOLGA6L25_chr15_28548568_28568779 | GOLGA6L25 | chr15 | 28548568 | 28568779 |
| HG01106 | hp1 | a0012 | c0017 | t0001 | g0018 | AMR | PUR | GOLGA6L25_chr15_28548568_28568779 | GOLGA6L25 | chr15 | 28548568 | 28568779 |
| HG01106 | hp2 | a0004 | c0011 | t0002 | g0003 | AMR | PUR | GOLGA6L25_chr15_28548568_28568779 | GOLGA6L25 | chr15 | 28548568 | 28568779 |
| HG01168 | hp1 | a0006 | c0006 | t0001 | g0001 | AMR | PUR | GOLGA6L25_chr15_28548568_28568779 | GOLGA6L25 | chr15 | 28548568 | 28568779 |
| HG01168 | hp2 | a0004 | c0007 | t0002 | g0025 | AMR | PUR | GOLGA6L25_chr15_28548568_28568779 | GOLGA6L25 | chr15 | 28548568 | 28568779 |
| HG01169 | hp1 | a0001 | c0002 | t0001 | g0001 | AMR | PUR | GOLGA6L25_chr15_28548568_28568779 | GOLGA6L25 | chr15 | 28548568 | 28568779 |
| HG01169 | hp2 | a0005 | c0005 | t0006 | g0001 | AMR | PUR | GOLGA6L25_chr15_28548568_28568779 | GOLGA6L25 | chr15 | 28548568 | 28568779 |
| HG01175 | hp1 | a0003 | c0004 | t0004 | g0007 | AMR | PUR | GOLGA6L25_chr15_28548568_28568779 | GOLGA6L25 | chr15 | 28548568 | 28568779 |
| HG01175 | hp2 | a0001 | c0002 | t0001 | g0001 | AMR | PUR | GOLGA6L25_chr15_28548568_28568779 | GOLGA6L25 | chr15 | 28548568 | 28568779 |
| HG01192 | hp1 | a0009 | c0020 | t0007 | g0023 | AMR | PUR | GOLGA6L25_chr15_28548568_28568779 | GOLGA6L25 | chr15 | 28548568 | 28568779 |
| HG01192 | hp2 | a0001 | c0003 | t0001 | g0001 | AMR | PUR | GOLGA6L25_chr15_28548568_28568779 | GOLGA6L25 | chr15 | 28548568 | 28568779 |
| HG01256 | hp1 | a0001 | c0003 | t0001 | g0005 | AMR | CLM | GOLGA6L25_chr15_28548568_28568779 | GOLGA6L25 | chr15 | 28548568 | 28568779 |
| HG01256 | hp2 | a0002 | c0001 | t0003 | g0002 | AMR | CLM | GOLGA6L25_chr15_28548568_28568779 | GOLGA6L25 | chr15 | 28548568 | 28568779 |
| HG01258 | hp1 | a0002 | c0001 | t0003 | g0002 | AMR | CLM | GOLGA6L25_chr15_28548568_28568779 | GOLGA6L25 | chr15 | 28548568 | 28568779 |
| HG01258 | hp2 | a0001 | c0003 | t0001 | g0005 | AMR | CLM | GOLGA6L25_chr15_28548568_28568779 | GOLGA6L25 | chr15 | 28548568 | 28568779 |
| HG01261 | hp1 | a0002 | c0001 | t0003 | g0034 | AMR | CLM | GOLGA6L25_chr15_28548568_28568779 | GOLGA6L25 | chr15 | 28548568 | 28568779 |
| HG01261 | hp2 | a0001 | c0025 | t0001 | g0009 | AMR | CLM | GOLGA6L25_chr15_28548568_28568779 | GOLGA6L25 | chr15 | 28548568 | 28568779 |
| HG01346 | hp1 | a0002 | c0001 | t0003 | g0002 | AMR | CLM | GOLGA6L25_chr15_28548568_28568779 | GOLGA6L25 | chr15 | 28548568 | 28568779 |
| HG01346 | hp2 | a0001 | c0003 | t0001 | g0005 | AMR | CLM | GOLGA6L25_chr15_28548568_28568779 | GOLGA6L25 | chr15 | 28548568 | 28568779 |
| HG01433 | hp1 | a0001 | c0002 | t0001 | g0001 | AMR | CLM | GOLGA6L25_chr15_28548568_28568779 | GOLGA6L25 | chr15 | 28548568 | 28568779 |
| HG01433 | hp2 | a0013 | c0016 | t0002 | g0046 | AMR | CLM | GOLGA6L25_chr15_28548568_28568779 | GOLGA6L25 | chr15 | 28548568 | 28568779 |
| HG01516 | hp1 | a0002 | c0001 | t0003 | g0036 | EUR | IBS | GOLGA6L25_chr15_28548568_28568779 | GOLGA6L25 | chr15 | 28548568 | 28568779 |
| HG01516 | hp2 | a0006 | c0006 | t0001 | g0004 | EUR | IBS | GOLGA6L25_chr15_28548568_28568779 | GOLGA6L25 | chr15 | 28548568 | 28568779 |
| HG01517 | hp1 | a0001 | c0002 | t0002 | g0009 | EUR | IBS | GOLGA6L25_chr15_28548568_28568779 | GOLGA6L25 | chr15 | 28548568 | 28568779 |
| HG01517 | hp2 | a0006 | c0006 | t0001 | g0004 | EUR | IBS | GOLGA6L25_chr15_28548568_28568779 | GOLGA6L25 | chr15 | 28548568 | 28568779 |
| HG01928 | hp1 | a0003 | c0008 | t0002 | g0006 | AMR | PEL | GOLGA6L25_chr15_28548568_28568779 | GOLGA6L25 | chr15 | 28548568 | 28568779 |
| HG01928 | hp2 | a0002 | c0001 | t0003 | g0002 | AMR | PEL | GOLGA6L25_chr15_28548568_28568779 | GOLGA6L25 | chr15 | 28548568 | 28568779 |
| HG01981 | hp1 | a0004 | c0011 | t0004 | g0026 | AMR | PEL | GOLGA6L25_chr15_28548568_28568779 | GOLGA6L25 | chr15 | 28548568 | 28568779 |
| HG01981 | hp2 | a0009 | c0022 | t0003 | g0039 | AMR | PEL | GOLGA6L25_chr15_28548568_28568779 | GOLGA6L25 | chr15 | 28548568 | 28568779 |
| HG01993 | hp1 | a0001 | c0003 | t0001 | g0001 | AMR | PEL | GOLGA6L25_chr15_28548568_28568779 | GOLGA6L25 | chr15 | 28548568 | 28568779 |
| HG01993 | hp2 | a0003 | c0008 | t0002 | g0021 | AMR | PEL | GOLGA6L25_chr15_28548568_28568779 | GOLGA6L25 | chr15 | 28548568 | 28568779 |
| HG02300 | hp1 | a0001 | c0002 | t0002 | g0030 | AMR | PEL | GOLGA6L25_chr15_28548568_28568779 | GOLGA6L25 | chr15 | 28548568 | 28568779 |
| HG02300 | hp2 | a0003 | c0008 | t0002 | g0006 | AMR | PEL | GOLGA6L25_chr15_28548568_28568779 | GOLGA6L25 | chr15 | 28548568 | 28568779 |
| HG02698 | hp1 | a0005 | c0005 | t0001 | g0001 | SAS | PJL | GOLGA6L25_chr15_28548568_28568779 | GOLGA6L25 | chr15 | 28548568 | 28568779 |
| HG02698 | hp2 | a0001 | c0002 | t0001 | g0001 | SAS | PJL | GOLGA6L25_chr15_28548568_28568779 | GOLGA6L25 | chr15 | 28548568 | 28568779 |
| HG02738 | hp1 | a0001 | c0003 | t0001 | g0005 | SAS | PJL | GOLGA6L25_chr15_28548568_28568779 | GOLGA6L25 | chr15 | 28548568 | 28568779 |
| HG02738 | hp2 | a0007 | c0009 | t0002 | g0032 | SAS | PJL | GOLGA6L25_chr15_28548568_28568779 | GOLGA6L25 | chr15 | 28548568 | 28568779 |
| HG02886 | hp1 | a0007 | c0009 | t0002 | g0031 | AFR | GWD | GOLGA6L25_chr15_28548568_28568779 | GOLGA6L25 | chr15 | 28548568 | 28568779 |
| HG02886 | hp2 | a0004 | c0019 | t0002 | g0022 | AFR | GWD | GOLGA6L25_chr15_28548568_28568779 | GOLGA6L25 | chr15 | 28548568 | 28568779 |
| HG02922 | hp1 | a0010 | c0012 | t0002 | g0043 | AFR | ESN | GOLGA6L25_chr15_28548568_28568779 | GOLGA6L25 | chr15 | 28548568 | 28568779 |
| HG02922 | hp2 | a0014 | c0015 | t0002 | g0044 | AFR | ESN | GOLGA6L25_chr15_28548568_28568779 | GOLGA6L25 | chr15 | 28548568 | 28568779 |
| HG03239 | hp1 | a0015 | c0014 | t0001 | g0011 | SAS | PJL | GOLGA6L25_chr15_28548568_28568779 | GOLGA6L25 | chr15 | 28548568 | 28568779 |
| HG03239 | hp2 | a0001 | c0003 | t0001 | g0029 | SAS | PJL | GOLGA6L25_chr15_28548568_28568779 | GOLGA6L25 | chr15 | 28548568 | 28568779 |
| HG03490 | hp1 | a0003 | c0004 | t0002 | g0008 | SAS | PJL | GOLGA6L25_chr15_28548568_28568779 | GOLGA6L25 | chr15 | 28548568 | 28568779 |
| HG03490 | hp2 | a0007 | c0009 | t0002 | g0014 | SAS | PJL | GOLGA6L25_chr15_28548568_28568779 | GOLGA6L25 | chr15 | 28548568 | 28568779 |
| HG03492 | hp1 | a0003 | c0004 | t0002 | g0008 | SAS | PJL | GOLGA6L25_chr15_28548568_28568779 | GOLGA6L25 | chr15 | 28548568 | 28568779 |
| HG03492 | hp2 | a0007 | c0009 | t0002 | g0014 | SAS | PJL | GOLGA6L25_chr15_28548568_28568779 | GOLGA6L25 | chr15 | 28548568 | 28568779 |
| HG03654 | hp1 | a0001 | c0002 | t0008 | g0013 | SAS | PJL | GOLGA6L25_chr15_28548568_28568779 | GOLGA6L25 | chr15 | 28548568 | 28568779 |
| HG03654 | hp2 | a0001 | c0003 | t0001 | g0001 | SAS | PJL | GOLGA6L25_chr15_28548568_28568779 | GOLGA6L25 | chr15 | 28548568 | 28568779 |
| HG03669 | hp1 | a0016 | c0021 | t0003 | g0002 | SAS | PJL | GOLGA6L25_chr15_28548568_28568779 | GOLGA6L25 | chr15 | 28548568 | 28568779 |
| HG03669 | hp2 | a0008 | c0010 | t0004 | g0019 | SAS | PJL | GOLGA6L25_chr15_28548568_28568779 | GOLGA6L25 | chr15 | 28548568 | 28568779 |
| HG03688 | hp1 | a0017 | c0018 | t0003 | g0041 | SAS | STU | GOLGA6L25_chr15_28548568_28568779 | GOLGA6L25 | chr15 | 28548568 | 28568779 |
| HG03688 | hp2 | a0003 | c0004 | t0005 | g0007 | SAS | STU | GOLGA6L25_chr15_28548568_28568779 | GOLGA6L25 | chr15 | 28548568 | 28568779 |
| HG04115 | hp1 | a0005 | c0005 | t0001 | g0001 | SAS | STU | GOLGA6L25_chr15_28548568_28568779 | GOLGA6L25 | chr15 | 28548568 | 28568779 |
| HG04115 | hp2 | a0001 | c0002 | t0003 | g0012 | SAS | STU | GOLGA6L25_chr15_28548568_28568779 | GOLGA6L25 | chr15 | 28548568 | 28568779 |
| HG04199 | hp1 | a0002 | c0001 | t0003 | g0035 | SAS | STU | GOLGA6L25_chr15_28548568_28568779 | GOLGA6L25 | chr15 | 28548568 | 28568779 |
| HG04199 | hp2 | a0001 | c0002 | t0003 | g0012 | SAS | STU | GOLGA6L25_chr15_28548568_28568779 | GOLGA6L25 | chr15 | 28548568 | 28568779 |
| HG04204 | hp1 | a0005 | c0005 | t0001 | g0001 | SAS | STU | GOLGA6L25_chr15_28548568_28568779 | GOLGA6L25 | chr15 | 28548568 | 28568779 |
| HG04204 | hp2 | a0010 | c0012 | t0002 | g0045 | SAS | STU | GOLGA6L25_chr15_28548568_28568779 | GOLGA6L25 | chr15 | 28548568 | 28568779 |
| NA18612 | hp1 | a0001 | c0002 | t0001 | g0004 | EAS | CHB | GOLGA6L25_chr15_28548568_28568779 | GOLGA6L25 | chr15 | 28548568 | 28568779 |
| NA18612 | hp2 | a0004 | c0007 | t0001 | g0003 | EAS | CHB | GOLGA6L25_chr15_28548568_28568779 | GOLGA6L25 | chr15 | 28548568 | 28568779 |
| NA18947 | hp1 | a0008 | c0010 | t0004 | g0010 | EAS | JPT | GOLGA6L25_chr15_28548568_28568779 | GOLGA6L25 | chr15 | 28548568 | 28568779 |
| NA18947 | hp2 | a0011 | c0013 | t0002 | g0003 | EAS | JPT | GOLGA6L25_chr15_28548568_28568779 | GOLGA6L25 | chr15 | 28548568 | 28568779 |
| NA19005 | hp1 | a0008 | c0010 | t0004 | g0010 | EAS | JPT | GOLGA6L25_chr15_28548568_28568779 | GOLGA6L25 | chr15 | 28548568 | 28568779 |
| NA19005 | hp2 | a0011 | c0013 | t0002 | g0003 | EAS | JPT | GOLGA6L25_chr15_28548568_28568779 | GOLGA6L25 | chr15 | 28548568 | 28568779 |
| NA19011 | hp1 | a0001 | c0002 | t0001 | g0004 | EAS | JPT | GOLGA6L25_chr15_28548568_28568779 | GOLGA6L25 | chr15 | 28548568 | 28568779 |
| NA19011 | hp2 | a0004 | c0007 | t0001 | g0024 | EAS | JPT | GOLGA6L25_chr15_28548568_28568779 | GOLGA6L25 | chr15 | 28548568 | 28568779 |
| NA19088 | hp1 | a0001 | c0002 | t0001 | g0004 | EAS | JPT | GOLGA6L25_chr15_28548568_28568779 | GOLGA6L25 | chr15 | 28548568 | 28568779 |
| NA19088 | hp2 | a0004 | c0007 | t0001 | g0003 | EAS | JPT | GOLGA6L25_chr15_28548568_28568779 | GOLGA6L25 | chr15 | 28548568 | 28568779 |
| NA20129 | hp1 | a0018 | c0023 | t0003 | g0038 | AFR | ASW | GOLGA6L25_chr15_28548568_28568779 | GOLGA6L25 | chr15 | 28548568 | 28568779 |
| NA20129 | hp2 | a0002 | c0001 | t0003 | g0040 | AFR | ASW | GOLGA6L25_chr15_28548568_28568779 | GOLGA6L25 | chr15 | 28548568 | 28568779 |
| NA20752 | hp1 | a0002 | c0001 | t0003 | g0002 | EUR | TSI | GOLGA6L25_chr15_28548568_28568779 | GOLGA6L25 | chr15 | 28548568 | 28568779 |
| NA20752 | hp2 | a0003 | c0004 | t0004 | g0007 | EUR | TSI | GOLGA6L25_chr15_28548568_28568779 | GOLGA6L25 | chr15 | 28548568 | 28568779 |
| NA20805 | hp1 | a0001 | c0003 | t0001 | g0001 | EUR | TSI | GOLGA6L25_chr15_28548568_28568779 | GOLGA6L25 | chr15 | 28548568 | 28568779 |
| NA20805 | hp2 | a0002 | c0001 | t0003 | g0002 | EUR | TSI | GOLGA6L25_chr15_28548568_28568779 | GOLGA6L25 | chr15 | 28548568 | 28568779 |
| NA20905 | hp1 | a0001 | c0003 | t0001 | g0005 | SAS | GIH | GOLGA6L25_chr15_28548568_28568779 | GOLGA6L25 | chr15 | 28548568 | 28568779 |
| NA20905 | hp2 | a0001 | c0002 | t0001 | g0028 | SAS | GIH | GOLGA6L25_chr15_28548568_28568779 | GOLGA6L25 | chr15 | 28548568 | 28568779 |
| HG01123 | hp1 | a0002 | c0001 | t0003 | g0002 | AMR | CLM | GOLGA6L25_chr15_28548568_28568779 | GOLGA6L25 | chr15 | 28548568 | 28568779 |
| HG01123 | hp2 | a0003 | c0008 | t0002 | g0020 | AMR | CLM | GOLGA6L25_chr15_28548568_28568779 | GOLGA6L25 | chr15 | 28548568 | 28568779 |
| NA21309 | hp1 | a0003 | c0004 | t0002 | g0006 | AFR | LWK | GOLGA6L25_chr15_28548568_28568779 | GOLGA6L25 | chr15 | 28548568 | 28568779 |
| NA21309 | hp2 | a0003 | c0024 | t0002 | g0007 | AFR | LWK | GOLGA6L25_chr15_28548568_28568779 | GOLGA6L25 | chr15 | 28548568 | 28568779 |
| view | chr:pos | ref | alt | # # of ahapid:amino-acid(protein) level |
ahapids | # # of haplotypeids |
haplotypeids | annotation | impact | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length |
cds cds pos length |
aa aa pos length |
distance | status | chr | pos |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| chr15:28553640 | A | ACCCCACC others(11): Show |
2 | a0006 a0017 |
5 | HG01074.hp2 HG01168.hp1 HG01516.hp2 others(2): Show |
disruptive_inframe_insertion | MODERATE | c.69_86dupCCACCTCCCT others(8): Show |
p.Pro29_Met30insHisL others(14): Show |
GOLGA6L25 | ENSG00000227717.5 | transcript | ENST00000620691.5 | protein_coding | 1/9 | 148/4286 | 87/2481 | 29/826 | INFO_REALIGN_3_PRIME | chr15 | 28553640 | ||
| chr15:28553640 | A | ACCCCACC others(29): Show |
1 | a0012 | 1 | HG01106.hp1 | disruptive_inframe_insertion | MODERATE | c.51_86dupCCACCTCCCT others(26): Show |
p.Pro29_Met30insHisL others(32): Show |
GOLGA6L25 | ENSG00000227717.5 | transcript | ENST00000620691.5 | protein_coding | 1/9 | 148/4286 | 87/2481 | 29/826 | INFO_REALIGN_3_PRIME | chr15 | 28553640 | ||
| chr15:28553640 | A | ACCCCACC others(47): Show |
1 | a0013 | 1 | HG01433.hp2 | disruptive_inframe_insertion | MODERATE | c.33_86dupCCACCTCCCT others(44): Show |
p.Pro29_Met30insHisL others(50): Show |
GOLGA6L25 | ENSG00000227717.5 | transcript | ENST00000620691.5 | protein_coding | 1/9 | 148/4286 | 87/2481 | 29/826 | INFO_REALIGN_3_PRIME | chr15 | 28553640 | ||
| chr15:28553640 | A | ACCCCACC others(65): Show |
1 | a0010 | 2 | HG02922.hp1 HG04204.hp2 |
disruptive_inframe_insertion | MODERATE | c.15_86dupCCACCTCCCT others(62): Show |
p.Pro29_Met30insHisL others(68): Show |
GOLGA6L25 | ENSG00000227717.5 | transcript | ENST00000620691.5 | protein_coding | 1/9 | 148/4286 | 87/2481 | 29/826 | INFO_REALIGN_3_PRIME | chr15 | 28553640 | ||
| chr15:28553640 | A | ACCCCACC others(101): Show |
1 | a0014 | 1 | HG02922.hp2 | disruptive_inframe_insertion | MODERATE | c.86_87insCCACCTCCCT others(98): Show |
p.Pro29_Met30insHisL others(104): Show |
GOLGA6L25 | ENSG00000227717.5 | transcript | ENST00000620691.5 | protein_coding | 1/9 | 148/4286 | 87/2481 | 29/826 | INFO_REALIGN_3_PRIME | chr15 | 28553640 | ||
| chr15:28553640 | ACCCCACC others(11): Show |
A | 1 | a0015 | 1 | HG03239.hp1 | disruptive_inframe_deletion | MODERATE | c.69_86delCCACCTCCCT others(8): Show |
p.His24_Pro29del | GOLGA6L25 | ENSG00000227717.5 | transcript | ENST00000620691.5 | protein_coding | 1/9 | 130/4286 | 69/2481 | 23/826 | INFO_REALIGN_3_PRIME | chr15 | 28553640 | ||
| chr15:28556777 | T | A | 12 | a0002 a0004 a0007 others(9): Show |
43 | HG00099.hp1 HG00323.hp1 HG00323.hp2 others(40): Show |
missense_variant | MODERATE | c.330T>A | p.His110Gln | GOLGA6L25 | ENSG00000227717.5 | transcript | ENST00000620691.5 | protein_coding | 4/9 | 391/4286 | 330/2481 | 110/826 | chr15 | 28556777 | |||
| chr15:28556848 | A | G | 1 | a0018 | 1 | NA20129.hp1 | missense_variant | MODERATE | c.401A>G | p.Lys134Arg | GOLGA6L25 | ENSG00000227717.5 | transcript | ENST00000620691.5 | protein_coding | 4/9 | 462/4286 | 401/2481 | 134/826 | chr15 | 28556848 | |||
| chr15:28559757 | G | A | 1 | a0007 | 4 | HG02738.hp2 HG02886.hp1 HG03490.hp2 others(1): Show |
missense_variant | MODERATE | c.859G>A | p.Glu287Lys | GOLGA6L25 | ENSG00000227717.5 | transcript | ENST00000620691.5 | protein_coding | 8/9 | 920/4286 | 859/2481 | 287/826 | chr15 | 28559757 | |||
| chr15:28560062 | A | AGAGAAGA others(14): Show |
1 | a0011 | 2 | NA18947.hp2 NA19005.hp2 |
conservative_inframe_insertion | MODERATE | c.1165_1185dupGAGAAG others(15): Show |
p.Glu389_Glu395dup | GOLGA6L25 | ENSG00000227717.5 | transcript | ENST00000620691.5 | protein_coding | 8/9 | 1247/4286 | 1186/2481 | 396/826 | INFO_REALIGN_3_PRIME | chr15 | 28560062 | ||
| chr15:28560396 | C | T | 1 | a0008 | 3 | HG03669.hp2 NA18947.hp1 NA19005.hp1 |
missense_variant | MODERATE | c.1498C>T | p.Arg500Trp | GOLGA6L25 | ENSG00000227717.5 | transcript | ENST00000620691.5 | protein_coding | 8/9 | 1559/4286 | 1498/2481 | 500/826 | chr15 | 28560396 | |||
| chr15:28560409 | A | T | 1 | a0007 | 4 | HG02738.hp2 HG02886.hp1 HG03490.hp2 others(1): Show |
missense_variant | MODERATE | c.1511A>T | p.Glu504Val | GOLGA6L25 | ENSG00000227717.5 | transcript | ENST00000620691.5 | protein_coding | 8/9 | 1572/4286 | 1511/2481 | 504/826 | chr15 | 28560409 | |||
| chr15:28560496 | G | GGCAGGAG others(14): Show |
1 | a0016 | 1 | HG03669.hp1 | conservative_inframe_insertion | MODERATE | c.1612_1632dupATACGG others(15): Show |
p.Ile538_Lys544dup | GOLGA6L25 | ENSG00000227717.5 | transcript | ENST00000620691.5 | protein_coding | 8/9 | 1694/4286 | 1633/2481 | 545/826 | INFO_REALIGN_3_PRIME | chr15 | 28560496 | ||
| chr15:28560637 | T | C | 7 | a0002 a0003 a0008 others(4): Show |
38 | HG00099.hp1 HG00323.hp1 HG00323.hp2 others(35): Show |
missense_variant | MODERATE | c.1739T>C | p.Ile580Thr | GOLGA6L25 | ENSG00000227717.5 | transcript | ENST00000620691.5 | protein_coding | 8/9 | 1800/4286 | 1739/2481 | 580/826 | chr15 | 28560637 | |||
| chr15:28560719 | G | A | 4 | a0002 a0016 a0017 others(1): Show |
21 | HG00099.hp1 HG00323.hp1 HG00323.hp2 others(18): Show |
missense_variant | MODERATE | c.1821G>A | p.Met607Ile | GOLGA6L25 | ENSG00000227717.5 | transcript | ENST00000620691.5 | protein_coding | 8/9 | 1882/4286 | 1821/2481 | 607/826 | chr15 | 28560719 | |||
| chr15:28561265 | T | G | 2 | a0005 a0015 |
6 | HG00735.hp1 HG01169.hp2 HG02698.hp1 others(3): Show |
missense_variant | MODERATE | c.2367T>G | p.Cys789Trp | GOLGA6L25 | ENSG00000227717.5 | transcript | ENST00000620691.5 | protein_coding | 8/9 | 2428/4286 | 2367/2481 | 789/826 | chr15 | 28561265 |
| view | chr:pos | ref | alt | # # of chapid |
chapids | # # of haplotypeids |
haplotypeids | annotation | impact | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length |
cds cds pos length |
aa aa pos length |
distance | status | chr | pos |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| chr15:28553709 | C | A | 5 | a0001c0002 a0003c0004 a0004c0011 others(2): Show |
32 | HG00099.hp2 HG00639.hp2 HG00735.hp1 others(29): Show |
synonymous_variant | LOW | c.81C>A | p.Thr27Thr | GOLGA6L25 | ENSG00000227717.5 | transcript | ENST00000620691.5 | protein_coding | 1/9 | 142/4286 | 81/2481 | 27/826 | chr15 | 28553709 | |||
| chr15:28553751 | C | T | 7 | a0001c0025 a0002c0001 a0003c0024 others(4): Show |
27 | HG00099.hp1 HG00323.hp1 HG00323.hp2 others(24): Show |
synonymous_variant | LOW | c.123C>T | p.Ala41Ala | GOLGA6L25 | ENSG00000227717.5 | transcript | ENST00000620691.5 | protein_coding | 1/9 | 184/4286 | 123/2481 | 41/826 | chr15 | 28553751 | |||
| chr15:28556825 | C | T | 14 | a0002c0001 a0004c0007 a0004c0011 others(11): Show |
42 | HG00099.hp1 HG00323.hp1 HG00323.hp2 others(39): Show |
synonymous_variant | LOW | c.378C>T | p.Leu126Leu | GOLGA6L25 | ENSG00000227717.5 | transcript | ENST00000620691.5 | protein_coding | 4/9 | 439/4286 | 378/2481 | 126/826 | chr15 | 28556825 |
| view | chr:pos | ref | alt | # # of thapid:transcript level |
thapids | # # of haplotypeids |
haplotypeids | annotation | impact | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length |
cds cds pos length |
aa aa pos length |
distance | status | chr | pos |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| chr15:28562718 | G | T | 1 | a0003c0004t0005 | 2 | HG01069.hp1 HG03688.hp2 |
3_prime_UTR_variant | MODIFIER | c.*683G>T | GOLGA6L25 | ENSG00000227717.5 | transcript | ENST00000620691.5 | protein_coding | 9/9 | 1339 | chr15 | 28562718 | ||||||
| chr15:28562724 | C | T | 6 | a0001c0002t0003 a0002c0001t0003 a0009c0022t0003 others(3): Show |
24 | HG00099.hp1 HG00323.hp1 HG00323.hp2 others(21): Show |
3_prime_UTR_variant | MODIFIER | c.*689C>T | GOLGA6L25 | ENSG00000227717.5 | transcript | ENST00000620691.5 | protein_coding | 9/9 | 1345 | chr15 | 28562724 | ||||||
| chr15:28562757 | C | T | 9 | a0001c0002t0003 a0002c0001t0003 a0003c0004t0004 others(6): Show |
30 | HG00099.hp1 HG00323.hp1 HG00323.hp2 others(27): Show |
3_prime_UTR_variant | MODIFIER | c.*722C>T | GOLGA6L25 | ENSG00000227717.5 | transcript | ENST00000620691.5 | protein_coding | 9/9 | 1378 | chr15 | 28562757 | ||||||
| chr15:28562918 | T | C | 1 | a0005c0005t0006 | 1 | HG01169.hp2 | 3_prime_UTR_variant | MODIFIER | c.*883T>C | GOLGA6L25 | ENSG00000227717.5 | transcript | ENST00000620691.5 | protein_coding | 9/9 | 1539 | chr15 | 28562918 | ||||||
| chr15:28562996 | TG | T | 7 | a0001c0002t0003 a0002c0001t0003 a0009c0020t0007 others(4): Show |
25 | HG00099.hp1 HG00323.hp1 HG00323.hp2 others(22): Show |
3_prime_UTR_variant | MODIFIER | c.*966delG | GOLGA6L25 | ENSG00000227717.5 | transcript | ENST00000620691.5 | protein_coding | 9/9 | 1622 | INFO_REALIGN_3_PRIME | chr15 | 28562996 | |||||
| chr15:28563040 | C | T | 24 | a0001c0002t0002 a0001c0002t0003 a0001c0002t0008 others(21): Show |
58 | HG00099.hp1 HG00099.hp2 HG00323.hp1 others(55): Show |
3_prime_UTR_variant | MODIFIER | c.*1005C>T | GOLGA6L25 | ENSG00000227717.5 | transcript | ENST00000620691.5 | protein_coding | 9/9 | 1661 | chr15 | 28563040 | ||||||
| chr15:28563135 | G | A | 1 | a0001c0002t0008 | 1 | HG03654.hp1 | 3_prime_UTR_variant | MODIFIER | c.*1100G>A | GOLGA6L25 | ENSG00000227717.5 | transcript | ENST00000620691.5 | protein_coding | 9/9 | 1756 | chr15 | 28563135 | ||||||
| chr15:28563598 | G | A | 1 | a0001c0002t0008 | 1 | HG03654.hp1 | 3_prime_UTR_variant | MODIFIER | c.*1563G>A | GOLGA6L25 | ENSG00000227717.5 | transcript | ENST00000620691.5 | protein_coding | 9/9 | 2219 | chr15 | 28563598 |
| view | chr:pos | ref | alt | # # of ghapid:genebody level |
ghapids | # # of haplotypeids |
haplotypeids | annotation | impact | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | genebody_biotype | rank | cdna cdna pos length |
cds cds pos length |
aa aa pos length |
distance | status | chr | pos |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| chr15:28553773 | G | A | 2 | a0001c0003t0001g0017 a0012c0017t0001g0018 |
2 | HG01074.hp1 HG01106.hp1 |
splice_region_variant&intron_variant | LOW | c.138+7G>A | GOLGA6L25 | ENSG00000227717.5 | transcript | ENST00000620691.5 | protein_coding | 1/8 | chr15 | 28553773 | |||||||
| chr15:28553799 | G | A | 1 | a0008c0010t0004g0019 | 1 | HG03669.hp2 | intron_variant | MODIFIER | c.138+33G>A | GOLGA6L25 | ENSG00000227717.5 | transcript | ENST00000620691.5 | protein_coding | 1/8 | chr15 | 28553799 | |||||||
| chr15:28553821 | C | T | 4 | a0010c0012t0002g0043 a0010c0012t0002g0045 a0013c0016t0002g0046 others(1): Show |
4 | HG01433.hp2 HG02922.hp1 HG02922.hp2 others(1): Show |
intron_variant | MODIFIER | c.138+55C>T | GOLGA6L25 | ENSG00000227717.5 | transcript | ENST00000620691.5 | protein_coding | 1/8 | chr15 | 28553821 | |||||||
| chr15:28553861 | GC | G | 4 | a0010c0012t0002g0043 a0010c0012t0002g0045 a0013c0016t0002g0046 others(1): Show |
4 | HG01433.hp2 HG02922.hp1 HG02922.hp2 others(1): Show |
intron_variant | MODIFIER | c.138+101delC | GOLGA6L25 | ENSG00000227717.5 | transcript | ENST00000620691.5 | protein_coding | 1/8 | INFO_REALIGN_3_PRIME | chr15 | 28553861 | ||||||
| chr15:28553877 | C | T | 1 | a0006c0006t0001g0042 | 1 | HG01074.hp2 | intron_variant | MODIFIER | c.138+111C>T | GOLGA6L25 | ENSG00000227717.5 | transcript | ENST00000620691.5 | protein_coding | 1/8 | chr15 | 28553877 | |||||||
| chr15:28554031 | C | G | 1 | a0017c0018t0003g0041 | 1 | HG03688.hp1 | intron_variant | MODIFIER | c.138+265C>G | GOLGA6L25 | ENSG00000227717.5 | transcript | ENST00000620691.5 | protein_coding | 1/8 | chr15 | 28554031 | |||||||
| chr15:28554059 | G | T | 17 | a0001c0002t0001g0033 a0002c0001t0003g0002 a0002c0001t0003g0016 others(14): Show |
28 | HG00099.hp1 HG00323.hp1 HG00323.hp2 others(25): Show |
intron_variant | MODIFIER | c.138+293G>T | GOLGA6L25 | ENSG00000227717.5 | transcript | ENST00000620691.5 | protein_coding | 1/8 | chr15 | 28554059 | |||||||
| chr15:28554217 | A | T | 1 | a0001c0002t0001g0015 | 2 | HG01069.hp2 HG01071.hp1 |
intron_variant | MODIFIER | c.138+451A>T | GOLGA6L25 | ENSG00000227717.5 | transcript | ENST00000620691.5 | protein_coding | 1/8 | chr15 | 28554217 | |||||||
| chr15:28554246 | C | T | 13 | a0002c0001t0003g0002 a0002c0001t0003g0016 a0002c0001t0003g0034 others(10): Show |
25 | HG00099.hp1 HG00323.hp1 HG00323.hp2 others(22): Show |
intron_variant | MODIFIER | c.138+480C>T | GOLGA6L25 | ENSG00000227717.5 | transcript | ENST00000620691.5 | protein_coding | 1/8 | chr15 | 28554246 | |||||||
| chr15:28554410 | T | C | 1 | a0003c0008t0002g0020 | 1 | HG01123.hp2 | intron_variant | MODIFIER | c.138+644T>C | GOLGA6L25 | ENSG00000227717.5 | transcript | ENST00000620691.5 | protein_coding | 1/8 | chr15 | 28554410 | |||||||
| chr15:28554548 | T | G | 24 | a0001c0002t0002g0009 a0001c0025t0001g0009 a0003c0004t0002g0006 others(21): Show |
30 | HG01069.hp1 HG01106.hp2 HG01123.hp2 others(27): Show |
intron_variant | MODIFIER | c.138+782T>G | GOLGA6L25 | ENSG00000227717.5 | transcript | ENST00000620691.5 | protein_coding | 1/8 | chr15 | 28554548 | |||||||
| chr15:28554745 | T | C | 1 | a0002c0001t0003g0034 | 1 | HG01261.hp1 | intron_variant | MODIFIER | c.139-668T>C | GOLGA6L25 | ENSG00000227717.5 | transcript | ENST00000620691.5 | protein_coding | 1/8 | chr15 | 28554745 | |||||||
| chr15:28554846 | G | C | 24 | a0002c0001t0003g0002 a0002c0001t0003g0016 a0002c0001t0003g0034 others(21): Show |
39 | HG00099.hp1 HG00323.hp1 HG00323.hp2 others(36): Show |
intron_variant | MODIFIER | c.139-567G>C | GOLGA6L25 | ENSG00000227717.5 | transcript | ENST00000620691.5 | protein_coding | 1/8 | chr15 | 28554846 | |||||||
| chr15:28555577 | G | A | 1 | a0004c0011t0004g0026 | 1 | HG01981.hp1 | intron_variant | MODIFIER | c.267+36G>A | GOLGA6L25 | ENSG00000227717.5 | transcript | ENST00000620691.5 | protein_coding | 2/8 | chr15 | 28555577 | |||||||
| chr15:28555926 | TG | T | 2 | a0002c0001t0003g0035 a0002c0001t0003g0036 |
2 | HG01516.hp1 HG04199.hp1 |
intron_variant | MODIFIER | c.267+387delG | GOLGA6L25 | ENSG00000227717.5 | transcript | ENST00000620691.5 | protein_coding | 2/8 | INFO_REALIGN_3_PRIME | chr15 | 28555926 | ||||||
| chr15:28555936 | G | A | 21 | a0001c0002t0001g0001 a0001c0002t0001g0004 a0001c0002t0001g0015 others(18): Show |
36 | HG00099.hp2 HG00140.hp1 HG00140.hp2 others(33): Show |
intron_variant | MODIFIER | c.267+395G>A | GOLGA6L25 | ENSG00000227717.5 | transcript | ENST00000620691.5 | protein_coding | 2/8 | chr15 | 28555936 | |||||||
| chr15:28556146 | T | G | 1 | a0001c0003t0001g0017 | 1 | HG01074.hp1 | intron_variant | MODIFIER | c.268-481T>G | GOLGA6L25 | ENSG00000227717.5 | transcript | ENST00000620691.5 | protein_coding | 2/8 | chr15 | 28556146 | |||||||
| chr15:28556176 | C | T | 12 | a0004c0007t0001g0003 a0004c0007t0001g0024 a0004c0007t0002g0025 others(9): Show |
15 | HG01106.hp2 HG01168.hp2 HG01192.hp1 others(12): Show |
intron_variant | MODIFIER | c.268-451C>T | GOLGA6L25 | ENSG00000227717.5 | transcript | ENST00000620691.5 | protein_coding | 2/8 | chr15 | 28556176 | |||||||
| chr15:28556270 | G | A | 8 | a0003c0004t0002g0006 a0003c0004t0002g0008 a0003c0004t0004g0007 others(5): Show |
11 | HG01069.hp1 HG01123.hp2 HG01175.hp1 others(8): Show |
intron_variant | MODIFIER | c.268-357G>A | GOLGA6L25 | ENSG00000227717.5 | transcript | ENST00000620691.5 | protein_coding | 2/8 | chr15 | 28556270 | |||||||
| chr15:28556302 | C | T | 2 | a0010c0012t0002g0045 a0013c0016t0002g0046 |
2 | HG01433.hp2 HG04204.hp2 |
intron_variant | MODIFIER | c.268-325C>T | GOLGA6L25 | ENSG00000227717.5 | transcript | ENST00000620691.5 | protein_coding | 2/8 | chr15 | 28556302 | |||||||
| chr15:28556370 | C | A | 8 | a0003c0004t0002g0006 a0003c0004t0002g0008 a0003c0004t0004g0007 others(5): Show |
11 | HG01069.hp1 HG01123.hp2 HG01175.hp1 others(8): Show |
intron_variant | MODIFIER | c.268-257C>A | GOLGA6L25 | ENSG00000227717.5 | transcript | ENST00000620691.5 | protein_coding | 2/8 | chr15 | 28556370 | |||||||
| chr15:28556467 | G | A | 27 | a0002c0001t0003g0002 a0002c0001t0003g0016 a0002c0001t0003g0034 others(24): Show |
42 | HG00099.hp1 HG00323.hp1 HG00323.hp2 others(39): Show |
intron_variant | MODIFIER | c.268-160G>A | GOLGA6L25 | ENSG00000227717.5 | transcript | ENST00000620691.5 | protein_coding | 2/8 | chr15 | 28556467 | |||||||
| chr15:28556492 | A | T | 1 | a0002c0001t0003g0040 | 1 | NA20129.hp2 | intron_variant | MODIFIER | c.268-135A>T | GOLGA6L25 | ENSG00000227717.5 | transcript | ENST00000620691.5 | protein_coding | 2/8 | chr15 | 28556492 | |||||||
| chr15:28556495 | C | T | 3 | a0007c0009t0002g0014 a0007c0009t0002g0031 a0007c0009t0002g0032 |
4 | HG02738.hp2 HG02886.hp1 HG03490.hp2 others(1): Show |
intron_variant | MODIFIER | c.268-132C>T | GOLGA6L25 | ENSG00000227717.5 | transcript | ENST00000620691.5 | protein_coding | 2/8 | chr15 | 28556495 | |||||||
| chr15:28556523 | A | G | 1 | a0008c0010t0004g0019 | 1 | HG03669.hp2 | intron_variant | MODIFIER | c.268-104A>G | GOLGA6L25 | ENSG00000227717.5 | transcript | ENST00000620691.5 | protein_coding | 2/8 | chr15 | 28556523 | |||||||
| chr15:28556579 | G | GC | 29 | a0002c0001t0003g0002 a0002c0001t0003g0016 a0002c0001t0003g0034 others(26): Show |
45 | HG00099.hp1 HG00323.hp1 HG00323.hp2 others(42): Show |
intron_variant | MODIFIER | c.268-48_268-47insC | GOLGA6L25 | ENSG00000227717.5 | transcript | ENST00000620691.5 | protein_coding | 2/8 | chr15 | 28556579 | |||||||
| chr15:28556580 | G | C | 29 | a0002c0001t0003g0002 a0002c0001t0003g0016 a0002c0001t0003g0034 others(26): Show |
45 | HG00099.hp1 HG00323.hp1 HG00323.hp2 others(42): Show |
intron_variant | MODIFIER | c.268-47G>C | GOLGA6L25 | ENSG00000227717.5 | transcript | ENST00000620691.5 | protein_coding | 2/8 | chr15 | 28556580 | |||||||
| chr15:28556599 | T | C | 28 | a0002c0001t0003g0002 a0002c0001t0003g0016 a0002c0001t0003g0034 others(25): Show |
43 | HG00099.hp1 HG00323.hp1 HG00323.hp2 others(40): Show |
intron_variant | MODIFIER | c.268-28T>C | GOLGA6L25 | ENSG00000227717.5 | transcript | ENST00000620691.5 | protein_coding | 2/8 | chr15 | 28556599 | |||||||
| chr15:28556756 | T | C | 1 | a0001c0002t0001g0015 | 2 | HG01069.hp2 HG01071.hp1 |
intron_variant | MODIFIER | c.319-10T>C | GOLGA6L25 | ENSG00000227717.5 | transcript | ENST00000620691.5 | protein_coding | 3/8 | chr15 | 28556756 | |||||||
| chr15:28557075 | C | T | 1 | a0004c0011t0004g0026 | 1 | HG01981.hp1 | intron_variant | MODIFIER | c.519+14C>T | GOLGA6L25 | ENSG00000227717.5 | transcript | ENST00000620691.5 | protein_coding | 5/8 | chr15 | 28557075 | |||||||
| chr15:28557341 | G | A | 1 | a0010c0012t0002g0043 | 1 | HG02922.hp1 | intron_variant | MODIFIER | c.519+280G>A | GOLGA6L25 | ENSG00000227717.5 | transcript | ENST00000620691.5 | protein_coding | 5/8 | chr15 | 28557341 | |||||||
| chr15:28557629 | G | A | 2 | a0008c0010t0004g0010 a0008c0010t0004g0019 |
3 | HG03669.hp2 NA18947.hp1 NA19005.hp1 |
intron_variant | MODIFIER | c.519+568G>A | GOLGA6L25 | ENSG00000227717.5 | transcript | ENST00000620691.5 | protein_coding | 5/8 | chr15 | 28557629 | |||||||
| chr15:28557672 | C | G | 9 | a0004c0007t0001g0003 a0004c0007t0001g0024 a0004c0007t0002g0025 others(6): Show |
11 | HG01106.hp2 HG01168.hp2 HG01192.hp1 others(8): Show |
intron_variant | MODIFIER | c.519+611C>G | GOLGA6L25 | ENSG00000227717.5 | transcript | ENST00000620691.5 | protein_coding | 5/8 | chr15 | 28557672 | |||||||
| chr15:28557714 | T | C | 38 | a0001c0003t0001g0027 a0002c0001t0003g0002 a0002c0001t0003g0016 others(35): Show |
56 | HG00099.hp1 HG00323.hp1 HG00323.hp2 others(53): Show |
intron_variant | MODIFIER | c.519+653T>C | GOLGA6L25 | ENSG00000227717.5 | transcript | ENST00000620691.5 | protein_coding | 5/8 | chr15 | 28557714 | |||||||
| chr15:28557797 | A | T | 13 | a0002c0001t0003g0002 a0002c0001t0003g0016 a0002c0001t0003g0034 others(10): Show |
25 | HG00099.hp1 HG00323.hp2 HG00639.hp1 others(22): Show |
intron_variant | MODIFIER | c.520-635A>T | GOLGA6L25 | ENSG00000227717.5 | transcript | ENST00000620691.5 | protein_coding | 5/8 | chr15 | 28557797 | |||||||
| chr15:28557837 | G | T | 1 | a0003c0008t0002g0020 | 1 | HG01123.hp2 | intron_variant | MODIFIER | c.520-595G>T | GOLGA6L25 | ENSG00000227717.5 | transcript | ENST00000620691.5 | protein_coding | 5/8 | chr15 | 28557837 | |||||||
| chr15:28557843 | A | C | 3 | a0004c0011t0004g0026 a0008c0010t0004g0010 a0008c0010t0004g0019 |
4 | HG01981.hp1 HG03669.hp2 NA18947.hp1 others(1): Show |
intron_variant | MODIFIER | c.520-589A>C | GOLGA6L25 | ENSG00000227717.5 | transcript | ENST00000620691.5 | protein_coding | 5/8 | chr15 | 28557843 | |||||||
| chr15:28557855 | A | G | 13 | a0002c0001t0003g0002 a0002c0001t0003g0016 a0002c0001t0003g0034 others(10): Show |
25 | HG00099.hp1 HG00323.hp2 HG00639.hp1 others(22): Show |
intron_variant | MODIFIER | c.520-577A>G | GOLGA6L25 | ENSG00000227717.5 | transcript | ENST00000620691.5 | protein_coding | 5/8 | chr15 | 28557855 | |||||||
| chr15:28558014 | G | A | 2 | a0005c0005t0001g0011 a0015c0014t0001g0011 |
2 | HG00735.hp1 HG03239.hp1 |
intron_variant | MODIFIER | c.520-418G>A | GOLGA6L25 | ENSG00000227717.5 | transcript | ENST00000620691.5 | protein_coding | 5/8 | chr15 | 28558014 | |||||||
| chr15:28558028 | T | C | 9 | a0001c0002t0003g0012 a0002c0001t0003g0035 a0004c0007t0001g0003 others(6): Show |
12 | HG01106.hp2 HG01168.hp2 HG01192.hp1 others(9): Show |
intron_variant | MODIFIER | c.520-404T>C | GOLGA6L25 | ENSG00000227717.5 | transcript | ENST00000620691.5 | protein_coding | 5/8 | chr15 | 28558028 | |||||||
| chr15:28558115 | A | G | 1 | a0014c0015t0002g0044 | 1 | HG02922.hp2 | intron_variant | MODIFIER | c.520-317A>G | GOLGA6L25 | ENSG00000227717.5 | transcript | ENST00000620691.5 | protein_coding | 5/8 | chr15 | 28558115 | |||||||
| chr15:28558169 | A | C | 28 | a0002c0001t0003g0002 a0002c0001t0003g0016 a0002c0001t0003g0034 others(25): Show |
43 | HG00099.hp1 HG00323.hp1 HG00323.hp2 others(40): Show |
intron_variant | MODIFIER | c.520-263A>C | GOLGA6L25 | ENSG00000227717.5 | transcript | ENST00000620691.5 | protein_coding | 5/8 | chr15 | 28558169 | |||||||
| chr15:28558219 | G | A | 2 | a0008c0010t0004g0010 a0008c0010t0004g0019 |
3 | HG03669.hp2 NA18947.hp1 NA19005.hp1 |
intron_variant | MODIFIER | c.520-213G>A | GOLGA6L25 | ENSG00000227717.5 | transcript | ENST00000620691.5 | protein_coding | 5/8 | chr15 | 28558219 | |||||||
| chr15:28558252 | A | AAAAAAAG | 20 | a0002c0001t0003g0002 a0002c0001t0003g0016 a0002c0001t0003g0034 others(17): Show |
35 | HG00099.hp1 HG00323.hp1 HG00323.hp2 others(32): Show |
intron_variant | MODIFIER | c.520-177_520-176ins others(7): Show |
GOLGA6L25 | ENSG00000227717.5 | transcript | ENST00000620691.5 | protein_coding | 5/8 | INFO_REALIGN_3_PRIME | chr15 | 28558252 | ||||||
| chr15:28558252 | A | AAAGAAAG | 9 | a0003c0004t0002g0006 a0003c0004t0002g0008 a0003c0004t0004g0007 others(6): Show |
12 | HG01069.hp1 HG01123.hp2 HG01175.hp1 others(9): Show |
intron_variant | MODIFIER | c.520-178_520-177ins others(7): Show |
GOLGA6L25 | ENSG00000227717.5 | transcript | ENST00000620691.5 | protein_coding | 5/8 | INFO_REALIGN_3_PRIME | chr15 | 28558252 | ||||||
| chr15:28558252 | A | G | 2 | a0004c0011t0004g0026 a0010c0012t0002g0043 |
2 | HG01981.hp1 HG02922.hp1 |
intron_variant | MODIFIER | c.520-180A>G | GOLGA6L25 | ENSG00000227717.5 | transcript | ENST00000620691.5 | protein_coding | 5/8 | chr15 | 28558252 | |||||||
| chr15:28558581 | A | T | 1 | a0010c0012t0002g0043 | 1 | HG02922.hp1 | intron_variant | MODIFIER | c.578+91A>T | GOLGA6L25 | ENSG00000227717.5 | transcript | ENST00000620691.5 | protein_coding | 6/8 | chr15 | 28558581 | |||||||
| chr15:28558591 | A | G | 1 | a0009c0020t0007g0023 | 1 | HG01192.hp1 | intron_variant | MODIFIER | c.578+101A>G | GOLGA6L25 | ENSG00000227717.5 | transcript | ENST00000620691.5 | protein_coding | 6/8 | chr15 | 28558591 | |||||||
| chr15:28558615 | A | G | 38 | a0001c0003t0001g0029 a0002c0001t0003g0002 a0002c0001t0003g0016 others(35): Show |
56 | HG00099.hp1 HG00323.hp1 HG00323.hp2 others(53): Show |
intron_variant | MODIFIER | c.578+125A>G | GOLGA6L25 | ENSG00000227717.5 | transcript | ENST00000620691.5 | protein_coding | 6/8 | chr15 | 28558615 | |||||||
| chr15:28558728 | T | C | 14 | a0002c0001t0003g0002 a0002c0001t0003g0016 a0002c0001t0003g0034 others(11): Show |
26 | HG00099.hp1 HG00323.hp1 HG00323.hp2 others(23): Show |
intron_variant | MODIFIER | c.579-93T>C | GOLGA6L25 | ENSG00000227717.5 | transcript | ENST00000620691.5 | protein_coding | 6/8 | chr15 | 28558728 | |||||||
| chr15:28558744 | C | T | 2 | a0008c0010t0004g0010 a0008c0010t0004g0019 |
3 | HG03669.hp2 NA18947.hp1 NA19005.hp1 |
intron_variant | MODIFIER | c.579-77C>T | GOLGA6L25 | ENSG00000227717.5 | transcript | ENST00000620691.5 | protein_coding | 6/8 | chr15 | 28558744 | |||||||
| chr15:28559084 | C | T | 6 | a0003c0004t0004g0007 a0003c0004t0005g0007 a0003c0024t0002g0007 others(3): Show |
8 | HG01175.hp1 HG01981.hp1 HG03669.hp2 others(5): Show |
intron_variant | MODIFIER | c.720+122C>T | GOLGA6L25 | ENSG00000227717.5 | transcript | ENST00000620691.5 | protein_coding | 7/8 | chr15 | 28559084 | |||||||
| chr15:28559205 | A | T | 1 | a0008c0010t0004g0019 | 1 | HG03669.hp2 | intron_variant | MODIFIER | c.720+243A>T | GOLGA6L25 | ENSG00000227717.5 | transcript | ENST00000620691.5 | protein_coding | 7/8 | chr15 | 28559205 | |||||||
| chr15:28559214 | T | C | 12 | a0001c0002t0001g0004 a0004c0007t0001g0003 a0004c0007t0001g0024 others(9): Show |
17 | HG01106.hp2 HG01168.hp2 HG01192.hp1 others(14): Show |
intron_variant | MODIFIER | c.720+252T>C | GOLGA6L25 | ENSG00000227717.5 | transcript | ENST00000620691.5 | protein_coding | 7/8 | chr15 | 28559214 | |||||||
| chr15:28559221 | CATTT | C | 16 | a0001c0002t0002g0013 a0001c0002t0002g0030 a0001c0002t0008g0013 others(13): Show |
20 | HG00099.hp2 HG01069.hp1 HG01123.hp2 others(17): Show |
intron_variant | MODIFIER | c.720+296_720+299del others(4): Show |
GOLGA6L25 | ENSG00000227717.5 | transcript | ENST00000620691.5 | protein_coding | 7/8 | INFO_REALIGN_3_PRIME | chr15 | 28559221 | ||||||
| chr15:28559221 | CATTTATT others(1): Show |
C | 10 | a0002c0001t0003g0002 a0002c0001t0003g0016 a0002c0001t0003g0034 others(7): Show |
21 | HG00099.hp1 HG00323.hp1 HG00323.hp2 others(18): Show |
intron_variant | MODIFIER | c.720+292_720+299del others(8): Show |
GOLGA6L25 | ENSG00000227717.5 | transcript | ENST00000620691.5 | protein_coding | 7/8 | INFO_REALIGN_3_PRIME | chr15 | 28559221 | ||||||
| chr15:28559221 | CATTTATT others(9): Show |
C | 1 | a0001c0002t0001g0028 | 1 | NA20905.hp2 | intron_variant | MODIFIER | c.720+284_720+299del others(16): Show |
GOLGA6L25 | ENSG00000227717.5 | transcript | ENST00000620691.5 | protein_coding | 7/8 | INFO_REALIGN_3_PRIME | chr15 | 28559221 | ||||||
| chr15:28559241 | T | C | 1 | a0018c0023t0003g0038 | 1 | NA20129.hp1 | intron_variant | MODIFIER | c.720+279T>C | GOLGA6L25 | ENSG00000227717.5 | transcript | ENST00000620691.5 | protein_coding | 7/8 | chr15 | 28559241 | |||||||
| chr15:28561906 | C | T | 1 | a0002c0001t0003g0016 | 2 | HG00639.hp1 HG00735.hp2 |
intron_variant | MODIFIER | c.*1-130C>T | GOLGA6L25 | ENSG00000227717.5 | transcript | ENST00000620691.5 | protein_coding | 8/8 | chr15 | 28561906 |