Item | Value |
---|---|
geneid | 57408 |
ensemblid | ENSG00000144771.8 |
hgncid | 25023 |
symbol | LRTM1 |
name | leucine rich repeats and transmembrane domains 1 |
refseq_nuc | NM_020678.4 |
refseq_prot | NP_065729.1 |
ensembl_nuc | ENST00000273286.6 |
ensembl_prot | ENSP00000273286.5 |
mane_status | MANE Select |
chr | chr3 |
start | 54918231 |
end | 54928059 |
strand | - |
ver | v1.2 |
region | chr3:54918231-54928059 |
region5000 | chr3:54913231-54933059 |
regionname0 | LRTM1_chr3_54918231_54928059 |
regionname5000 | LRTM1_chr3_54913231_54933059 |
ahapid | grch38/chm13v2 | alen | total | AFR | AMR | EAS | EUR | SAS | JPT | regionname | genename | aa | chr | start | end |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
a0001 | 1/1 | 345 | 323 | 71 | 66 | 126 | 16 | 42 | 91 | LRTM1_chr3_54913231_54933059 | LRTM1 | MKGEL others(340): Show |
chr3 | 54913231 | 54933059 |
a0002 | 0/0 | 345 | 10 | 10 | 0 | 0 | 0 | 0 | 0 | LRTM1_chr3_54913231_54933059 | LRTM1 | MKGEL others(340): Show |
chr3 | 54913231 | 54933059 |
a0003 | 0/0 | 345 | 3 | 3 | 0 | 0 | 0 | 0 | 0 | LRTM1_chr3_54913231_54933059 | LRTM1 | MKGEL others(340): Show |
chr3 | 54913231 | 54933059 |
a0004 | 0/0 | 345 | 3 | 3 | 0 | 0 | 0 | 0 | 0 | LRTM1_chr3_54913231_54933059 | LRTM1 | MKGEL others(340): Show |
chr3 | 54913231 | 54933059 |
a0005 | 0/0 | 345 | 3 | 0 | 0 | 3 | 0 | 0 | 3 | LRTM1_chr3_54913231_54933059 | LRTM1 | MKGEL others(340): Show |
chr3 | 54913231 | 54933059 |
a0006 | 0/0 | 345 | 2 | 2 | 0 | 0 | 0 | 0 | 0 | LRTM1_chr3_54913231_54933059 | LRTM1 | MKGEL others(340): Show |
chr3 | 54913231 | 54933059 |
a0007 | 0/0 | 345 | 2 | 2 | 0 | 0 | 0 | 0 | 0 | LRTM1_chr3_54913231_54933059 | LRTM1 | MKGEL others(340): Show |
chr3 | 54913231 | 54933059 |
a0008 | 0/0 | 345 | 1 | 0 | 0 | 1 | 0 | 0 | 0 | LRTM1_chr3_54913231_54933059 | LRTM1 | MKGEL others(340): Show |
chr3 | 54913231 | 54933059 |
a0009 | 0/0 | 345 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | LRTM1_chr3_54913231_54933059 | LRTM1 | MKGEL others(340): Show |
chr3 | 54913231 | 54933059 |
achapid | grch38/chm13v2 | alen | clen | total | AFR | AMR | EAS | EUR | SAS | regionname | genename | aseq | cseq | chr | start | end |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
a0001c0001 | 1/1 | 1035 | 308 | 59 | 65 | 125 | 16 | 41 | LRTM1_chr3_54913231_54933059 | LRTM1 | ATGAA others(1030): Show |
chr3 | 54913231 | 54933059 | ||
a0001c0002 | 0/0 | 1035 | 10 | 10 | 0 | 0 | 0 | 0 | LRTM1_chr3_54913231_54933059 | LRTM1 | ATGAA others(1030): Show |
chr3 | 54913231 | 54933059 | ||
a0001c0008 | 0/0 | 1035 | 2 | 2 | 0 | 0 | 0 | 0 | LRTM1_chr3_54913231_54933059 | LRTM1 | ATGAA others(1030): Show |
chr3 | 54913231 | 54933059 | ||
a0001c0011 | 0/0 | 1035 | 1 | 0 | 0 | 1 | 0 | 0 | LRTM1_chr3_54913231_54933059 | LRTM1 | ATGAA others(1030): Show |
chr3 | 54913231 | 54933059 | ||
a0001c0012 | 0/0 | 1035 | 1 | 0 | 1 | 0 | 0 | 0 | LRTM1_chr3_54913231_54933059 | LRTM1 | ATGAA others(1030): Show |
chr3 | 54913231 | 54933059 | ||
a0001c0013 | 0/0 | 1035 | 1 | 0 | 0 | 0 | 0 | 1 | LRTM1_chr3_54913231_54933059 | LRTM1 | ATGAA others(1030): Show |
chr3 | 54913231 | 54933059 | ||
a0002c0003 | 0/0 | 1035 | 10 | 10 | 0 | 0 | 0 | 0 | LRTM1_chr3_54913231_54933059 | LRTM1 | ATGAA others(1030): Show |
chr3 | 54913231 | 54933059 | ||
a0003c0009 | 0/0 | 1035 | 2 | 2 | 0 | 0 | 0 | 0 | LRTM1_chr3_54913231_54933059 | LRTM1 | ATGAA others(1030): Show |
chr3 | 54913231 | 54933059 | ||
a0003c0015 | 0/0 | 1035 | 1 | 1 | 0 | 0 | 0 | 0 | LRTM1_chr3_54913231_54933059 | LRTM1 | ATGAA others(1030): Show |
chr3 | 54913231 | 54933059 | ||
a0004c0005 | 0/0 | 1035 | 3 | 3 | 0 | 0 | 0 | 0 | LRTM1_chr3_54913231_54933059 | LRTM1 | ATGAA others(1030): Show |
chr3 | 54913231 | 54933059 | ||
a0005c0004 | 0/0 | 1035 | 3 | 0 | 0 | 3 | 0 | 0 | LRTM1_chr3_54913231_54933059 | LRTM1 | ATGAA others(1030): Show |
chr3 | 54913231 | 54933059 | ||
a0006c0007 | 0/0 | 1035 | 2 | 2 | 0 | 0 | 0 | 0 | LRTM1_chr3_54913231_54933059 | LRTM1 | ATGAA others(1030): Show |
chr3 | 54913231 | 54933059 | ||
a0007c0006 | 0/0 | 1035 | 2 | 2 | 0 | 0 | 0 | 0 | LRTM1_chr3_54913231_54933059 | LRTM1 | ATGAA others(1030): Show |
chr3 | 54913231 | 54933059 | ||
a0008c0010 | 0/0 | 1035 | 1 | 0 | 0 | 1 | 0 | 0 | LRTM1_chr3_54913231_54933059 | LRTM1 | ATGAA others(1030): Show |
chr3 | 54913231 | 54933059 | ||
a0009c0014 | 0/0 | 1035 | 1 | 1 | 0 | 0 | 0 | 0 | LRTM1_chr3_54913231_54933059 | LRTM1 | ATGAA others(1030): Show |
chr3 | 54913231 | 54933059 |
acthapid | grch38chm13v2 | tlen | total | AFR | AMR | EAS | EUR | SAS | regionname | genename | tseq | chr | start | end |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
a0001c0001t0001 | 0/0 | 1414 | 143 | 11 | 34 | 74 | 9 | 15 | LRTM1_chr3_54913231_54933059 | LRTM1 | GTTTT others(1409): Show |
chr3 | 54913231 | 54933059 |
a0001c0001t0002 | 0/0 | 1414 | 65 | 24 | 13 | 18 | 2 | 8 | LRTM1_chr3_54913231_54933059 | LRTM1 | GTTTT others(1409): Show |
chr3 | 54913231 | 54933059 |
a0001c0001t0003 | 1/1 | 1414 | 67 | 5 | 13 | 29 | 5 | 13 | LRTM1_chr3_54913231_54933059 | LRTM1 | GTTTT others(1409): Show |
chr3 | 54913231 | 54933059 |
a0001c0001t0006 | 0/0 | 1414 | 5 | 1 | 1 | 0 | 0 | 3 | LRTM1_chr3_54913231_54933059 | LRTM1 | GTTTT others(1409): Show |
chr3 | 54913231 | 54933059 |
a0001c0001t0007 | 0/0 | 1414 | 5 | 3 | 2 | 0 | 0 | 0 | LRTM1_chr3_54913231_54933059 | LRTM1 | GTTTT others(1409): Show |
chr3 | 54913231 | 54933059 |
a0001c0001t0008 | 0/0 | 1414 | 5 | 5 | 0 | 0 | 0 | 0 | LRTM1_chr3_54913231_54933059 | LRTM1 | GTTTT others(1409): Show |
chr3 | 54913231 | 54933059 |
a0001c0001t0009 | 0/0 | 1414 | 2 | 0 | 0 | 1 | 0 | 1 | LRTM1_chr3_54913231_54933059 | LRTM1 | GTTTT others(1409): Show |
chr3 | 54913231 | 54933059 |
a0001c0001t0010 | 0/0 | 1414 | 1 | 1 | 0 | 0 | 0 | 0 | LRTM1_chr3_54913231_54933059 | LRTM1 | GTTTT others(1409): Show |
chr3 | 54913231 | 54933059 |
a0001c0001t0011 | 0/0 | 1414 | 4 | 4 | 0 | 0 | 0 | 0 | LRTM1_chr3_54913231_54933059 | LRTM1 | GTTTT others(1409): Show |
chr3 | 54913231 | 54933059 |
a0001c0001t0012 | 0/0 | 1414 | 3 | 1 | 2 | 0 | 0 | 0 | LRTM1_chr3_54913231_54933059 | LRTM1 | GTTTT others(1409): Show |
chr3 | 54913231 | 54933059 |
a0001c0001t0013 | 0/0 | 1414 | 2 | 2 | 0 | 0 | 0 | 0 | LRTM1_chr3_54913231_54933059 | LRTM1 | GTTTT others(1409): Show |
chr3 | 54913231 | 54933059 |
a0001c0001t0014 | 0/0 | 1414 | 1 | 0 | 0 | 0 | 0 | 1 | LRTM1_chr3_54913231_54933059 | LRTM1 | GTTTT others(1409): Show |
chr3 | 54913231 | 54933059 |
a0001c0001t0015 | 0/0 | 1408 | 1 | 0 | 0 | 1 | 0 | 0 | LRTM1_chr3_54913231_54933059 | LRTM1 | GTTTT others(1403): Show |
chr3 | 54913231 | 54933059 |
a0001c0001t0017 | 0/0 | 1414 | 1 | 0 | 0 | 1 | 0 | 0 | LRTM1_chr3_54913231_54933059 | LRTM1 | GTTTT others(1409): Show |
chr3 | 54913231 | 54933059 |
a0001c0001t0018 | 0/0 | 1414 | 1 | 1 | 0 | 0 | 0 | 0 | LRTM1_chr3_54913231_54933059 | LRTM1 | GTTTT others(1409): Show |
chr3 | 54913231 | 54933059 |
a0001c0001t0020 | 0/0 | 1408 | 1 | 1 | 0 | 0 | 0 | 0 | LRTM1_chr3_54913231_54933059 | LRTM1 | GTTTT others(1403): Show |
chr3 | 54913231 | 54933059 |
a0001c0001t0021 | 0/0 | 1414 | 1 | 0 | 0 | 1 | 0 | 0 | LRTM1_chr3_54913231_54933059 | LRTM1 | GTTTT others(1409): Show |
chr3 | 54913231 | 54933059 |
a0001c0002t0004 | 0/0 | 1414 | 10 | 10 | 0 | 0 | 0 | 0 | LRTM1_chr3_54913231_54933059 | LRTM1 | GTTTT others(1409): Show |
chr3 | 54913231 | 54933059 |
a0001c0008t0002 | 0/0 | 1414 | 2 | 2 | 0 | 0 | 0 | 0 | LRTM1_chr3_54913231_54933059 | LRTM1 | GTTTT others(1409): Show |
chr3 | 54913231 | 54933059 |
a0001c0011t0001 | 0/0 | 1414 | 1 | 0 | 0 | 1 | 0 | 0 | LRTM1_chr3_54913231_54933059 | LRTM1 | GTTTT others(1409): Show |
chr3 | 54913231 | 54933059 |
a0001c0012t0001 | 0/0 | 1414 | 1 | 0 | 1 | 0 | 0 | 0 | LRTM1_chr3_54913231_54933059 | LRTM1 | GTTTT others(1409): Show |
chr3 | 54913231 | 54933059 |
a0001c0013t0002 | 0/0 | 1414 | 1 | 0 | 0 | 0 | 0 | 1 | LRTM1_chr3_54913231_54933059 | LRTM1 | GTTTT others(1409): Show |
chr3 | 54913231 | 54933059 |
a0002c0003t0005 | 0/0 | 1408 | 9 | 9 | 0 | 0 | 0 | 0 | LRTM1_chr3_54913231_54933059 | LRTM1 | GTTTT others(1403): Show |
chr3 | 54913231 | 54933059 |
a0002c0003t0019 | 0/0 | 1408 | 1 | 1 | 0 | 0 | 0 | 0 | LRTM1_chr3_54913231_54933059 | LRTM1 | GTTTT others(1403): Show |
chr3 | 54913231 | 54933059 |
a0003c0009t0010 | 0/0 | 1414 | 2 | 2 | 0 | 0 | 0 | 0 | LRTM1_chr3_54913231_54933059 | LRTM1 | GTTTT others(1409): Show |
chr3 | 54913231 | 54933059 |
a0003c0015t0010 | 0/0 | 1414 | 1 | 1 | 0 | 0 | 0 | 0 | LRTM1_chr3_54913231_54933059 | LRTM1 | GTTTT others(1409): Show |
chr3 | 54913231 | 54933059 |
a0004c0005t0009 | 0/0 | 1414 | 2 | 2 | 0 | 0 | 0 | 0 | LRTM1_chr3_54913231_54933059 | LRTM1 | GTTTT others(1409): Show |
chr3 | 54913231 | 54933059 |
a0004c0005t0016 | 0/0 | 1414 | 1 | 1 | 0 | 0 | 0 | 0 | LRTM1_chr3_54913231_54933059 | LRTM1 | GTTTT others(1409): Show |
chr3 | 54913231 | 54933059 |
a0005c0004t0001 | 0/0 | 1414 | 3 | 0 | 0 | 3 | 0 | 0 | LRTM1_chr3_54913231_54933059 | LRTM1 | GTTTT others(1409): Show |
chr3 | 54913231 | 54933059 |
a0006c0007t0002 | 0/0 | 1414 | 2 | 2 | 0 | 0 | 0 | 0 | LRTM1_chr3_54913231_54933059 | LRTM1 | GTTTT others(1409): Show |
chr3 | 54913231 | 54933059 |
a0007c0006t0002 | 0/0 | 1414 | 1 | 1 | 0 | 0 | 0 | 0 | LRTM1_chr3_54913231_54933059 | LRTM1 | GTTTT others(1409): Show |
chr3 | 54913231 | 54933059 |
a0007c0006t0003 | 0/0 | 1414 | 1 | 1 | 0 | 0 | 0 | 0 | LRTM1_chr3_54913231_54933059 | LRTM1 | GTTTT others(1409): Show |
chr3 | 54913231 | 54933059 |
a0008c0010t0001 | 0/0 | 1414 | 1 | 0 | 0 | 1 | 0 | 0 | LRTM1_chr3_54913231_54933059 | LRTM1 | GTTTT others(1409): Show |
chr3 | 54913231 | 54933059 |
a0009c0014t0002 | 0/0 | 1414 | 1 | 1 | 0 | 0 | 0 | 0 | LRTM1_chr3_54913231_54933059 | LRTM1 | GTTTT others(1409): Show |
chr3 | 54913231 | 54933059 |
actghapid | grch38/chm13v2 | total | AFR | AMR | EAS | EUR | SAS | regionname | genename | chr | start | end |
---|---|---|---|---|---|---|---|---|---|---|---|---|
a0001c0001t0001g0001 | 0/0 | 61 | 4 | 14 | 30 | 5 | 8 | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
a0001c0001t0001g0003 | 0/0 | 16 | 0 | 2 | 11 | 1 | 2 | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
a0001c0001t0001g0006 | 0/0 | 9 | 0 | 5 | 3 | 0 | 1 | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
a0001c0001t0001g0007 | 0/0 | 8 | 2 | 1 | 3 | 1 | 1 | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
a0001c0001t0001g0008 | 0/0 | 7 | 0 | 0 | 7 | 0 | 0 | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
a0001c0001t0001g0015 | 0/0 | 4 | 0 | 3 | 1 | 0 | 0 | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
a0001c0001t0001g0016 | 0/0 | 4 | 4 | 0 | 0 | 0 | 0 | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
a0001c0001t0001g0021 | 0/0 | 3 | 0 | 3 | 0 | 0 | 0 | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
a0001c0001t0001g0027 | 0/0 | 2 | 0 | 0 | 2 | 0 | 0 | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
a0001c0001t0001g0029 | 0/0 | 2 | 0 | 0 | 2 | 0 | 0 | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
a0001c0001t0001g0030 | 0/0 | 2 | 0 | 1 | 1 | 0 | 0 | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
a0001c0001t0001g0032 | 0/0 | 2 | 0 | 0 | 2 | 0 | 0 | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
a0001c0001t0001g0033 | 0/0 | 2 | 0 | 1 | 0 | 1 | 0 | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
a0001c0001t0001g0053 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
a0001c0001t0001g0054 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
a0001c0001t0001g0057 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
a0001c0001t0001g0058 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
a0001c0001t0001g0061 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
a0001c0001t0001g0062 | 0/0 | 1 | 0 | 0 | 0 | 1 | 0 | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
a0001c0001t0001g0066 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
a0001c0001t0001g0067 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
a0001c0001t0001g0068 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
a0001c0001t0001g0069 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
a0001c0001t0001g0070 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
a0001c0001t0001g0073 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
a0001c0001t0001g0074 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
a0001c0001t0001g0075 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
a0001c0001t0001g0076 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
a0001c0001t0001g0078 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
a0001c0001t0001g0079 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
a0001c0001t0001g0082 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
a0001c0001t0001g0083 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
a0001c0001t0001g0085 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
a0001c0001t0001g0086 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
a0001c0001t0002g0002 | 0/0 | 17 | 8 | 1 | 7 | 0 | 1 | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
a0001c0001t0002g0010 | 0/0 | 6 | 1 | 4 | 0 | 1 | 0 | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
a0001c0001t0002g0013 | 0/0 | 5 | 0 | 0 | 5 | 0 | 0 | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
a0001c0001t0002g0017 | 0/0 | 4 | 1 | 2 | 1 | 0 | 0 | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
a0001c0001t0002g0018 | 0/0 | 4 | 4 | 0 | 0 | 0 | 0 | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
a0001c0001t0002g0022 | 0/0 | 3 | 0 | 0 | 0 | 0 | 3 | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
a0001c0001t0002g0023 | 0/0 | 3 | 1 | 1 | 0 | 1 | 0 | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
a0001c0001t0002g0037 | 0/0 | 2 | 0 | 0 | 0 | 0 | 2 | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
a0001c0001t0002g0039 | 0/0 | 2 | 1 | 0 | 1 | 0 | 0 | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
a0001c0001t0002g0041 | 0/0 | 2 | 1 | 1 | 0 | 0 | 0 | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
a0001c0001t0002g0042 | 0/0 | 2 | 2 | 0 | 0 | 0 | 0 | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
a0001c0001t0002g0095 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
a0001c0001t0002g0096 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
a0001c0001t0002g0097 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
a0001c0001t0002g0099 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
a0001c0001t0002g0100 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
a0001c0001t0002g0101 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
a0001c0001t0002g0103 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
a0001c0001t0002g0104 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
a0001c0001t0002g0105 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
a0001c0001t0002g0106 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
a0001c0001t0002g0108 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
a0001c0001t0002g0110 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
a0001c0001t0002g0113 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
a0001c0001t0002g0115 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
a0001c0001t0002g0117 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
a0001c0001t0003g0004 | 0/0 | 13 | 0 | 6 | 2 | 3 | 2 | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
a0001c0001t0003g0005 | 1/0 | 12 | 0 | 2 | 6 | 1 | 2 | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
a0001c0001t0003g0014 | 0/0 | 5 | 0 | 0 | 4 | 0 | 1 | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
a0001c0001t0003g0020 | 0/0 | 4 | 0 | 1 | 2 | 0 | 1 | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
a0001c0001t0003g0024 | 0/0 | 3 | 3 | 0 | 0 | 0 | 0 | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
a0001c0001t0003g0025 | 0/0 | 3 | 0 | 0 | 3 | 0 | 0 | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
a0001c0001t0003g0026 | 0/1 | 3 | 0 | 1 | 1 | 0 | 0 | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
a0001c0001t0003g0045 | 0/0 | 2 | 1 | 0 | 0 | 1 | 0 | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
a0001c0001t0003g0046 | 0/0 | 2 | 0 | 0 | 0 | 0 | 2 | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
a0001c0001t0003g0047 | 0/0 | 2 | 1 | 0 | 0 | 0 | 1 | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
a0001c0001t0003g0048 | 0/0 | 2 | 0 | 2 | 0 | 0 | 0 | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
a0001c0001t0003g0049 | 0/0 | 2 | 0 | 0 | 2 | 0 | 0 | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
a0001c0001t0003g0050 | 0/0 | 2 | 0 | 0 | 1 | 0 | 1 | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
a0001c0001t0003g0118 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
a0001c0001t0003g0119 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
a0001c0001t0003g0120 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
a0001c0001t0003g0122 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
a0001c0001t0003g0123 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
a0001c0001t0003g0124 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
a0001c0001t0003g0125 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
a0001c0001t0003g0126 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
a0001c0001t0003g0127 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
a0001c0001t0003g0128 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
a0001c0001t0003g0129 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
a0001c0001t0003g0130 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
a0001c0001t0006g0056 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
a0001c0001t0006g0060 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
a0001c0001t0006g0065 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
a0001c0001t0006g0071 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
a0001c0001t0006g0081 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
a0001c0001t0007g0012 | 0/0 | 5 | 3 | 2 | 0 | 0 | 0 | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
a0001c0001t0008g0043 | 0/0 | 2 | 2 | 0 | 0 | 0 | 0 | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
a0001c0001t0008g0044 | 0/0 | 2 | 2 | 0 | 0 | 0 | 0 | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
a0001c0001t0008g0116 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
a0001c0001t0009g0077 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
a0001c0001t0009g0084 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
a0001c0001t0010g0094 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
a0001c0001t0011g0019 | 0/0 | 4 | 4 | 0 | 0 | 0 | 0 | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
a0001c0001t0012g0040 | 0/0 | 2 | 1 | 1 | 0 | 0 | 0 | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
a0001c0001t0012g0107 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
a0001c0001t0013g0051 | 0/0 | 2 | 2 | 0 | 0 | 0 | 0 | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
a0001c0001t0014g0052 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
a0001c0001t0015g0072 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
a0001c0001t0017g0087 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
a0001c0001t0018g0089 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
a0001c0001t0020g0111 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
a0001c0001t0021g0131 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
a0001c0002t0004g0009 | 0/0 | 7 | 7 | 0 | 0 | 0 | 0 | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
a0001c0002t0004g0088 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
a0001c0002t0004g0092 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
a0001c0002t0004g0093 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
a0001c0008t0002g0038 | 0/0 | 2 | 2 | 0 | 0 | 0 | 0 | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
a0001c0011t0001g0059 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
a0001c0012t0001g0064 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
a0001c0013t0002g0102 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
a0002c0003t0005g0011 | 0/0 | 5 | 5 | 0 | 0 | 0 | 0 | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
a0002c0003t0005g0035 | 0/0 | 2 | 2 | 0 | 0 | 0 | 0 | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
a0002c0003t0005g0036 | 0/0 | 2 | 2 | 0 | 0 | 0 | 0 | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
a0002c0003t0019g0091 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
a0003c0009t0010g0034 | 0/0 | 2 | 2 | 0 | 0 | 0 | 0 | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
a0003c0015t0010g0090 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
a0004c0005t0009g0028 | 0/0 | 2 | 2 | 0 | 0 | 0 | 0 | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
a0004c0005t0016g0055 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
a0005c0004t0001g0031 | 0/0 | 2 | 0 | 0 | 2 | 0 | 0 | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
a0005c0004t0001g0080 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
a0006c0007t0002g0109 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
a0006c0007t0002g0112 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
a0007c0006t0002g0098 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
a0007c0006t0003g0121 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
a0008c0010t0001g0063 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
a0009c0014t0002g0114 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
sampleid | ID haplotypeid
|
ahapid | chapid | thapid | ghapid | gpopname | popname | regionname | genename | chr | start | end |
---|---|---|---|---|---|---|---|---|---|---|---|---|
HG00099 | hp1 | a0001 | c0001 | t0002 | g0010 | EUR | GBR | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
HG00099 | hp2 | a0001 | c0001 | t0001 | g0001 | EUR | GBR | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
HG00140 | hp1 | a0001 | c0001 | t0001 | g0001 | EUR | GBR | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
HG00140 | hp2 | a0001 | c0001 | t0003 | g0004 | EUR | GBR | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
HG00280 | hp1 | a0001 | c0001 | t0003 | g0005 | EUR | FIN | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
HG00280 | hp2 | a0001 | c0001 | t0001 | g0007 | EUR | FIN | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
HG00408 | hp1 | a0001 | c0001 | t0002 | g0095 | EAS | CHS | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
HG00408 | hp2 | a0001 | c0001 | t0001 | g0001 | EAS | CHS | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
HG00423 | hp1 | a0001 | c0001 | t0002 | g0013 | EAS | CHS | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
HG00423 | hp2 | a0001 | c0001 | t0001 | g0001 | EAS | CHS | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
HG00438 | hp1 | a0001 | c0001 | t0001 | g0003 | EAS | CHS | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
HG00438 | hp2 | a0001 | c0001 | t0003 | g0126 | EAS | CHS | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
HG00544 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | CHS | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
HG00544 | hp2 | a0001 | c0001 | t0003 | g0005 | EAS | CHS | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
HG00558 | hp1 | a0001 | c0001 | t0001 | g0027 | EAS | CHS | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
HG00558 | hp2 | a0001 | c0001 | t0001 | g0001 | EAS | CHS | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
HG00621 | hp1 | a0001 | c0001 | t0003 | g0128 | EAS | CHS | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
HG00621 | hp2 | a0001 | c0001 | t0001 | g0001 | EAS | CHS | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
HG00639 | hp1 | a0001 | c0001 | t0001 | g0015 | AMR | PUR | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
HG00639 | hp2 | a0001 | c0001 | t0002 | g0010 | AMR | PUR | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
HG00673 | hp1 | a0001 | c0001 | t0001 | g0006 | EAS | CHS | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
HG00673 | hp2 | a0001 | c0001 | t0003 | g0014 | EAS | CHS | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
HG00735 | hp1 | a0001 | c0001 | t0001 | g0001 | AMR | PUR | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
HG00735 | hp2 | a0001 | c0001 | t0001 | g0001 | AMR | PUR | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
HG00738 | hp1 | a0001 | c0001 | t0001 | g0003 | AMR | PUR | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
HG00738 | hp2 | a0001 | c0001 | t0001 | g0007 | AMR | PUR | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
HG00741 | hp1 | a0001 | c0001 | t0001 | g0006 | AMR | PUR | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
HG00741 | hp2 | a0001 | c0001 | t0003 | g0005 | AMR | PUR | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
HG01069 | hp1 | a0001 | c0001 | t0003 | g0004 | AMR | PUR | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
HG01069 | hp2 | a0001 | c0001 | t0002 | g0103 | AMR | PUR | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
HG01071 | hp1 | a0001 | c0001 | t0002 | g0010 | AMR | PUR | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
HG01071 | hp2 | a0001 | c0001 | t0003 | g0004 | AMR | PUR | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
HG01074 | hp1 | a0001 | c0001 | t0001 | g0021 | AMR | PUR | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
HG01074 | hp2 | a0001 | c0001 | t0001 | g0058 | AMR | PUR | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
HG01081 | hp1 | a0001 | c0001 | t0002 | g0104 | AMR | PUR | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
HG01081 | hp2 | a0001 | c0001 | t0001 | g0001 | AMR | PUR | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
HG01099 | hp1 | a0001 | c0001 | t0002 | g0002 | AMR | PUR | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
HG01099 | hp2 | a0001 | c0001 | t0002 | g0099 | AMR | PUR | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
HG01106 | hp1 | a0001 | c0001 | t0002 | g0017 | AMR | PUR | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
HG01106 | hp2 | a0001 | c0001 | t0001 | g0006 | AMR | PUR | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
HG01109 | hp1 | a0001 | c0001 | t0002 | g0041 | AMR | PUR | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
HG01109 | hp2 | a0001 | c0001 | t0001 | g0033 | AMR | PUR | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
HG01167 | hp1 | a0001 | c0001 | t0012 | g0107 | AMR | PUR | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
HG01167 | hp2 | a0001 | c0001 | t0001 | g0030 | AMR | PUR | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
HG01168 | hp1 | a0001 | c0001 | t0001 | g0006 | AMR | PUR | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
HG01168 | hp2 | a0001 | c0001 | t0001 | g0021 | AMR | PUR | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
HG01169 | hp1 | a0001 | c0001 | t0012 | g0040 | AMR | PUR | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
HG01169 | hp2 | a0001 | c0001 | t0001 | g0021 | AMR | PUR | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
HG01175 | hp1 | a0001 | c0001 | t0003 | g0004 | AMR | PUR | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
HG01175 | hp2 | a0001 | c0001 | t0001 | g0006 | AMR | PUR | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
HG01192 | hp1 | a0001 | c0001 | t0001 | g0015 | AMR | PUR | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
HG01192 | hp2 | a0001 | c0001 | t0001 | g0001 | AMR | PUR | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
HG01243 | hp1 | a0001 | c0001 | t0006 | g0065 | AMR | PUR | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
HG01243 | hp2 | a0001 | c0001 | t0007 | g0012 | AMR | PUR | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
HG01255 | hp1 | a0001 | c0001 | t0003 | g0004 | AMR | CLM | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
HG01255 | hp2 | a0001 | c0001 | t0001 | g0015 | AMR | CLM | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
HG01256 | hp1 | a0001 | c0001 | t0003 | g0048 | AMR | CLM | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
HG01256 | hp2 | a0001 | c0001 | t0003 | g0004 | AMR | CLM | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
HG01257 | hp1 | a0001 | c0001 | t0002 | g0010 | AMR | CLM | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
HG01257 | hp2 | a0001 | c0001 | t0001 | g0006 | AMR | CLM | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
HG01258 | hp1 | a0001 | c0001 | t0002 | g0010 | AMR | CLM | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
HG01258 | hp2 | a0001 | c0001 | t0003 | g0048 | AMR | CLM | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
HG01261 | hp1 | a0001 | c0001 | t0003 | g0020 | AMR | CLM | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
HG01261 | hp2 | a0001 | c0001 | t0001 | g0003 | AMR | CLM | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
HG01346 | hp1 | a0001 | c0001 | t0002 | g0017 | AMR | CLM | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
HG01346 | hp2 | a0001 | c0001 | t0002 | g0023 | AMR | CLM | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
HG01361 | hp1 | a0001 | c0001 | t0003 | g0125 | AMR | CLM | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
HG01361 | hp2 | a0001 | c0001 | t0001 | g0001 | AMR | CLM | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
HG01433 | hp1 | a0001 | c0001 | t0003 | g0004 | AMR | CLM | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
HG01433 | hp2 | a0001 | c0001 | t0002 | g0106 | AMR | CLM | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
HG01515 | hp1 | a0001 | c0001 | t0001 | g0001 | EUR | IBS | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
HG01515 | hp2 | a0001 | c0001 | t0003 | g0004 | EUR | IBS | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
HG01516 | hp1 | a0001 | c0001 | t0001 | g0001 | EUR | IBS | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
HG01516 | hp2 | a0001 | c0001 | t0001 | g0062 | EUR | IBS | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
HG01517 | hp1 | a0001 | c0001 | t0003 | g0004 | EUR | IBS | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
HG01517 | hp2 | a0001 | c0001 | t0001 | g0001 | EUR | IBS | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
HG01884 | hp1 | a0001 | c0001 | t0002 | g0018 | AFR | ACB | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
HG01884 | hp2 | a0002 | c0003 | t0005 | g0035 | AFR | ACB | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
HG01891 | hp1 | a0003 | c0009 | t0010 | g0034 | AFR | ACB | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
HG01891 | hp2 | a0001 | c0002 | t0004 | g0009 | AFR | ACB | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
HG01934 | hp1 | a0001 | c0012 | t0001 | g0064 | AMR | PEL | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
HG01934 | hp2 | a0001 | c0001 | t0001 | g0001 | AMR | PEL | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
HG01975 | hp1 | a0001 | c0001 | t0001 | g0001 | AMR | PEL | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
HG01975 | hp2 | a0001 | c0001 | t0001 | g0070 | AMR | PEL | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
HG01978 | hp1 | a0001 | c0001 | t0001 | g0001 | AMR | PEL | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
HG01978 | hp2 | a0001 | c0001 | t0001 | g0001 | AMR | PEL | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
HG01981 | hp1 | a0001 | c0001 | t0001 | g0082 | AMR | PEL | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
HG01981 | hp2 | a0001 | c0001 | t0007 | g0012 | AMR | PEL | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
HG01993 | hp1 | a0001 | c0001 | t0001 | g0001 | AMR | PEL | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
HG01993 | hp2 | a0001 | c0001 | t0001 | g0001 | AMR | PEL | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
HG02015 | hp1 | a0001 | c0001 | t0003 | g0124 | EAS | KHV | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
HG02015 | hp2 | a0001 | c0001 | t0003 | g0122 | EAS | KHV | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
HG02027 | hp1 | a0001 | c0001 | t0001 | g0007 | EAS | KHV | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
HG02027 | hp2 | a0001 | c0001 | t0003 | g0014 | EAS | KHV | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
HG02040 | hp1 | a0001 | c0001 | t0001 | g0003 | EAS | KHV | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
HG02040 | hp2 | a0001 | c0001 | t0002 | g0017 | EAS | KHV | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
HG02071 | hp1 | a0001 | c0001 | t0003 | g0020 | EAS | KHV | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
HG02071 | hp2 | a0001 | c0001 | t0001 | g0003 | EAS | KHV | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
HG02080 | hp1 | a0001 | c0001 | t0002 | g0002 | EAS | KHV | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
HG02080 | hp2 | a0001 | c0001 | t0001 | g0008 | EAS | KHV | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
HG02083 | hp1 | a0001 | c0001 | t0003 | g0127 | EAS | KHV | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
HG02083 | hp2 | a0001 | c0001 | t0001 | g0003 | EAS | KHV | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
HG02135 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | KHV | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
HG02135 | hp2 | a0001 | c0001 | t0003 | g0004 | EAS | KHV | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
HG02145 | hp1 | a0001 | c0001 | t0002 | g0023 | AFR | ACB | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
HG02145 | hp2 | a0006 | c0007 | t0002 | g0112 | AFR | ACB | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
HG02155 | hp1 | a0001 | c0001 | t0003 | g0050 | EAS | CDX | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
HG02155 | hp2 | a0001 | c0001 | t0002 | g0002 | EAS | CDX | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
HG02257 | hp1 | a0001 | c0001 | t0003 | g0045 | AFR | ACB | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
HG02257 | hp2 | a0001 | c0002 | t0004 | g0009 | AFR | ACB | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
HG02258 | hp1 | a0001 | c0001 | t0010 | g0094 | AFR | ACB | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
HG02258 | hp2 | a0001 | c0001 | t0003 | g0024 | AFR | ACB | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
HG02273 | hp1 | a0001 | c0001 | t0001 | g0001 | AMR | PEL | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
HG02273 | hp2 | a0001 | c0001 | t0001 | g0074 | AMR | PEL | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
HG02280 | hp1 | a0001 | c0001 | t0001 | g0016 | AFR | ACB | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
HG02280 | hp2 | a0001 | c0001 | t0002 | g0042 | AFR | ACB | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
HG02300 | hp1 | a0001 | c0001 | t0003 | g0026 | AMR | PEL | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
HG02300 | hp2 | a0001 | c0001 | t0001 | g0001 | AMR | PEL | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
HG02523 | hp1 | a0008 | c0010 | t0001 | g0063 | EAS | KHV | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
HG02523 | hp2 | a0001 | c0001 | t0003 | g0129 | EAS | KHV | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
HG02572 | hp1 | a0001 | c0001 | t0002 | g0002 | AFR | GWD | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
HG02572 | hp2 | a0001 | c0002 | t0004 | g0009 | AFR | GWD | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
HG02615 | hp1 | a0001 | c0001 | t0008 | g0116 | AFR | GWD | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
HG02615 | hp2 | a0001 | c0001 | t0003 | g0047 | AFR | GWD | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
HG02622 | hp1 | a0001 | c0001 | t0001 | g0001 | AFR | GWD | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
HG02622 | hp2 | a0001 | c0001 | t0001 | g0016 | AFR | GWD | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
HG02630 | hp1 | a0002 | c0003 | t0005 | g0011 | AFR | GWD | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
HG02630 | hp2 | a0006 | c0007 | t0002 | g0109 | AFR | GWD | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
HG02647 | hp1 | a0002 | c0003 | t0005 | g0011 | AFR | GWD | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
HG02647 | hp2 | a0004 | c0005 | t0009 | g0028 | AFR | GWD | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
HG02698 | hp1 | a0001 | c0001 | t0003 | g0118 | SAS | PJL | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
HG02698 | hp2 | a0001 | c0001 | t0001 | g0001 | SAS | PJL | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
HG02717 | hp1 | a0001 | c0001 | t0002 | g0002 | AFR | GWD | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
HG02717 | hp2 | a0001 | c0001 | t0001 | g0001 | AFR | GWD | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
HG02735 | hp1 | a0001 | c0001 | t0003 | g0014 | SAS | PJL | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
HG02735 | hp2 | a0001 | c0001 | t0001 | g0001 | SAS | PJL | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
HG02738 | hp1 | a0001 | c0001 | t0003 | g0004 | SAS | PJL | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
HG02738 | hp2 | a0001 | c0001 | t0002 | g0022 | SAS | PJL | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
HG02809 | hp1 | a0003 | c0015 | t0010 | g0090 | AFR | GWD | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
HG02809 | hp2 | a0004 | c0005 | t0016 | g0055 | AFR | GWD | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
HG02818 | hp1 | a0001 | c0002 | t0004 | g0009 | AFR | GWD | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
HG02818 | hp2 | a0001 | c0001 | t0011 | g0019 | AFR | GWD | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
HG02886 | hp1 | a0001 | c0001 | t0008 | g0044 | AFR | GWD | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
HG02886 | hp2 | a0001 | c0001 | t0002 | g0002 | AFR | GWD | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
HG02895 | hp1 | a0002 | c0003 | t0005 | g0036 | AFR | GWD | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
HG02895 | hp2 | a0001 | c0001 | t0002 | g0117 | AFR | GWD | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
HG02897 | hp1 | a0001 | c0001 | t0008 | g0043 | AFR | GWD | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
HG02897 | hp2 | a0002 | c0003 | t0005 | g0036 | AFR | GWD | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
HG02922 | hp1 | a0001 | c0001 | t0002 | g0097 | AFR | ESN | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
HG02922 | hp2 | a0002 | c0003 | t0005 | g0011 | AFR | ESN | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
HG02965 | hp1 | a0001 | c0008 | t0002 | g0038 | AFR | ESN | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
HG02965 | hp2 | a0001 | c0001 | t0011 | g0019 | AFR | ESN | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
HG02970 | hp1 | a0002 | c0003 | t0019 | g0091 | AFR | ESN | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
HG02970 | hp2 | a0001 | c0002 | t0004 | g0009 | AFR | ESN | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
HG02976 | hp1 | a0001 | c0001 | t0007 | g0012 | AFR | ESN | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
HG02976 | hp2 | a0001 | c0001 | t0002 | g0039 | AFR | ESN | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
HG03017 | hp1 | a0001 | c0001 | t0002 | g0002 | SAS | PJL | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
HG03017 | hp2 | a0001 | c0001 | t0001 | g0001 | SAS | PJL | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
HG03041 | hp1 | a0002 | c0003 | t0005 | g0035 | AFR | GWD | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
HG03041 | hp2 | a0001 | c0001 | t0002 | g0002 | AFR | GWD | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
HG03098 | hp1 | a0001 | c0001 | t0013 | g0051 | AFR | MSL | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
HG03098 | hp2 | a0001 | c0001 | t0002 | g0002 | AFR | MSL | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
HG03130 | hp1 | a0001 | c0001 | t0008 | g0043 | AFR | ESN | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
HG03130 | hp2 | a0002 | c0003 | t0005 | g0011 | AFR | ESN | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
HG03139 | hp1 | a0001 | c0001 | t0011 | g0019 | AFR | ESN | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
HG03139 | hp2 | a0001 | c0001 | t0012 | g0040 | AFR | ESN | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
HG03195 | hp1 | a0001 | c0001 | t0001 | g0016 | AFR | ESN | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
HG03195 | hp2 | a0001 | c0001 | t0002 | g0042 | AFR | ESN | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
HG03209 | hp1 | a0001 | c0001 | t0001 | g0007 | AFR | MSL | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
HG03209 | hp2 | a0001 | c0001 | t0002 | g0115 | AFR | MSL | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
HG03225 | hp1 | a0001 | c0001 | t0001 | g0016 | AFR | MSL | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
HG03225 | hp2 | a0001 | c0001 | t0011 | g0019 | AFR | MSL | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
HG03239 | hp1 | a0001 | c0001 | t0009 | g0084 | SAS | PJL | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
HG03239 | hp2 | a0001 | c0001 | t0001 | g0001 | SAS | PJL | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
HG03453 | hp1 | a0003 | c0009 | t0010 | g0034 | AFR | MSL | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
HG03453 | hp2 | a0001 | c0002 | t0004 | g0093 | AFR | MSL | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
HG03486 | hp1 | a0001 | c0001 | t0001 | g0007 | AFR | MSL | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
HG03486 | hp2 | a0001 | c0001 | t0013 | g0051 | AFR | MSL | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
HG03490 | hp1 | a0001 | c0001 | t0001 | g0003 | SAS | PJL | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
HG03490 | hp2 | a0001 | c0001 | t0003 | g0046 | SAS | PJL | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
HG03491 | hp1 | a0001 | c0001 | t0002 | g0037 | SAS | PJL | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
HG03491 | hp2 | a0001 | c0001 | t0014 | g0052 | SAS | PJL | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
HG03492 | hp1 | a0001 | c0001 | t0003 | g0046 | SAS | PJL | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
HG03492 | hp2 | a0001 | c0001 | t0002 | g0037 | SAS | PJL | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
HG03516 | hp1 | a0001 | c0001 | t0006 | g0071 | AFR | ESN | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
HG03516 | hp2 | a0001 | c0002 | t0004 | g0088 | AFR | ESN | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
HG03540 | hp1 | a0001 | c0001 | t0001 | g0001 | AFR | GWD | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
HG03540 | hp2 | a0001 | c0001 | t0008 | g0044 | AFR | GWD | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
HG03579 | hp1 | a0001 | c0001 | t0002 | g0010 | AFR | MSL | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
HG03579 | hp2 | a0001 | c0001 | t0002 | g0110 | AFR | MSL | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
HG03654 | hp1 | a0001 | c0001 | t0001 | g0073 | SAS | PJL | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
HG03654 | hp2 | a0001 | c0001 | t0003 | g0020 | SAS | PJL | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
HG03704 | hp1 | a0001 | c0001 | t0001 | g0001 | SAS | PJL | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
HG03704 | hp2 | a0001 | c0001 | t0001 | g0001 | SAS | PJL | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
HG03710 | hp1 | a0001 | c0013 | t0002 | g0102 | SAS | PJL | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
HG03710 | hp2 | a0001 | c0001 | t0002 | g0108 | SAS | PJL | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
HG03831 | hp1 | a0001 | c0001 | t0002 | g0105 | SAS | BEB | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
HG03831 | hp2 | a0001 | c0001 | t0003 | g0004 | SAS | BEB | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
HG03834 | hp1 | a0001 | c0001 | t0001 | g0007 | SAS | BEB | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
HG03834 | hp2 | a0001 | c0001 | t0003 | g0005 | SAS | BEB | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
HG03927 | hp1 | a0001 | c0001 | t0003 | g0130 | SAS | BEB | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
HG03927 | hp2 | a0001 | c0001 | t0003 | g0005 | SAS | BEB | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
HG03942 | hp1 | a0001 | c0001 | t0006 | g0056 | SAS | BEB | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
HG03942 | hp2 | a0001 | c0001 | t0002 | g0022 | SAS | BEB | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
HG04115 | hp1 | a0001 | c0001 | t0001 | g0001 | SAS | STU | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
HG04115 | hp2 | a0001 | c0001 | t0003 | g0050 | SAS | STU | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
HG04184 | hp1 | a0001 | c0001 | t0001 | g0003 | SAS | BEB | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
HG04184 | hp2 | a0001 | c0001 | t0003 | g0123 | SAS | BEB | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
HG04199 | hp1 | a0001 | c0001 | t0006 | g0081 | SAS | STU | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
HG04199 | hp2 | a0001 | c0001 | t0006 | g0060 | SAS | STU | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
HG04204 | hp1 | a0001 | c0001 | t0001 | g0006 | SAS | STU | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
HG04204 | hp2 | a0001 | c0001 | t0001 | g0054 | SAS | STU | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
HG04228 | hp1 | a0001 | c0001 | t0001 | g0001 | SAS | STU | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
HG04228 | hp2 | a0001 | c0001 | t0002 | g0022 | SAS | STU | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
NA18522 | hp1 | a0001 | c0001 | t0007 | g0012 | AFR | YRI | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
NA18522 | hp2 | a0009 | c0014 | t0002 | g0114 | AFR | YRI | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
NA18612 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | CHB | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
NA18612 | hp2 | a0001 | c0011 | t0001 | g0059 | EAS | CHB | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
NA18747 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | CHB | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
NA18747 | hp2 | a0001 | c0001 | t0001 | g0068 | EAS | CHB | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
NA18906 | hp1 | a0001 | c0008 | t0002 | g0038 | AFR | YRI | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
NA18906 | hp2 | a0001 | c0002 | t0004 | g0092 | AFR | YRI | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
NA18939 | hp1 | a0001 | c0001 | t0003 | g0005 | EAS | JPT | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
NA18939 | hp2 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
NA18943 | hp1 | a0001 | c0001 | t0001 | g0067 | EAS | JPT | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
NA18943 | hp2 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
NA18944 | hp1 | a0001 | c0001 | t0003 | g0005 | EAS | JPT | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
NA18944 | hp2 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
NA18956 | hp1 | a0001 | c0001 | t0001 | g0032 | EAS | JPT | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
NA18956 | hp2 | a0001 | c0001 | t0001 | g0061 | EAS | JPT | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
NA18957 | hp1 | a0001 | c0001 | t0003 | g0020 | EAS | JPT | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
NA18957 | hp2 | a0001 | c0001 | t0001 | g0006 | EAS | JPT | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
NA18961 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
NA18961 | hp2 | a0001 | c0001 | t0001 | g0076 | EAS | JPT | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
NA18962 | hp1 | a0001 | c0001 | t0017 | g0087 | EAS | JPT | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
NA18962 | hp2 | a0001 | c0001 | t0001 | g0003 | EAS | JPT | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
NA18963 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
NA18963 | hp2 | a0001 | c0001 | t0003 | g0005 | EAS | JPT | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
NA18964 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
NA18964 | hp2 | a0001 | c0001 | t0003 | g0026 | EAS | JPT | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
NA18965 | hp1 | a0001 | c0001 | t0003 | g0049 | EAS | JPT | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
NA18965 | hp2 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
NA18966 | hp1 | a0001 | c0001 | t0001 | g0003 | EAS | JPT | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
NA18966 | hp2 | a0001 | c0001 | t0001 | g0007 | EAS | JPT | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
NA18970 | hp1 | a0005 | c0004 | t0001 | g0080 | EAS | JPT | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
NA18970 | hp2 | a0001 | c0001 | t0021 | g0131 | EAS | JPT | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
NA18974 | hp1 | a0001 | c0001 | t0001 | g0069 | EAS | JPT | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
NA18974 | hp2 | a0001 | c0001 | t0015 | g0072 | EAS | JPT | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
NA18977 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
NA18977 | hp2 | a0001 | c0001 | t0003 | g0119 | EAS | JPT | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
NA18979 | hp1 | a0005 | c0004 | t0001 | g0031 | EAS | JPT | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
NA18979 | hp2 | a0001 | c0001 | t0003 | g0014 | EAS | JPT | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
NA18980 | hp1 | a0001 | c0001 | t0001 | g0007 | EAS | JPT | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
NA18980 | hp2 | a0001 | c0001 | t0009 | g0077 | EAS | JPT | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
NA18981 | hp1 | a0001 | c0001 | t0002 | g0002 | EAS | JPT | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
NA18981 | hp2 | a0001 | c0001 | t0002 | g0113 | EAS | JPT | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
NA18988 | hp1 | a0001 | c0001 | t0002 | g0013 | EAS | JPT | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
NA18988 | hp2 | a0001 | c0001 | t0001 | g0003 | EAS | JPT | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
NA18992 | hp1 | a0001 | c0001 | t0001 | g0008 | EAS | JPT | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
NA18992 | hp2 | a0005 | c0004 | t0001 | g0031 | EAS | JPT | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
NA18993 | hp1 | a0001 | c0001 | t0001 | g0006 | EAS | JPT | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
NA18993 | hp2 | a0001 | c0001 | t0002 | g0002 | EAS | JPT | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
NA18994 | hp1 | a0001 | c0001 | t0001 | g0086 | EAS | JPT | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
NA18994 | hp2 | a0001 | c0001 | t0001 | g0008 | EAS | JPT | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
NA18995 | hp1 | a0001 | c0001 | t0001 | g0003 | EAS | JPT | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
NA18995 | hp2 | a0001 | c0001 | t0003 | g0025 | EAS | JPT | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
NA19000 | hp1 | a0001 | c0001 | t0001 | g0032 | EAS | JPT | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
NA19000 | hp2 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
NA19001 | hp1 | a0001 | c0001 | t0002 | g0100 | EAS | JPT | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
NA19001 | hp2 | a0001 | c0001 | t0002 | g0013 | EAS | JPT | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
NA19003 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
NA19003 | hp2 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
NA19005 | hp1 | a0001 | c0001 | t0003 | g0014 | EAS | JPT | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
NA19005 | hp2 | a0001 | c0001 | t0002 | g0002 | EAS | JPT | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
NA19006 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
NA19006 | hp2 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
NA19009 | hp1 | a0001 | c0001 | t0001 | g0085 | EAS | JPT | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
NA19009 | hp2 | a0001 | c0001 | t0001 | g0057 | EAS | JPT | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
NA19012 | hp1 | a0001 | c0001 | t0001 | g0029 | EAS | JPT | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
NA19012 | hp2 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
NA19030 | hp1 | a0001 | c0001 | t0020 | g0111 | AFR | LWK | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
NA19030 | hp2 | a0007 | c0006 | t0003 | g0121 | AFR | LWK | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
NA19043 | hp1 | a0001 | c0001 | t0003 | g0024 | AFR | LWK | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
NA19043 | hp2 | a0001 | c0001 | t0002 | g0041 | AFR | LWK | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
NA19057 | hp1 | a0001 | c0001 | t0001 | g0008 | EAS | JPT | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
NA19057 | hp2 | a0001 | c0001 | t0003 | g0025 | EAS | JPT | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
NA19058 | hp1 | a0001 | c0001 | t0003 | g0049 | EAS | JPT | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
NA19058 | hp2 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
NA19060 | hp1 | a0001 | c0001 | t0001 | g0008 | EAS | JPT | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
NA19060 | hp2 | a0001 | c0001 | t0001 | g0066 | EAS | JPT | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
NA19062 | hp1 | a0001 | c0001 | t0001 | g0075 | EAS | JPT | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
NA19062 | hp2 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
NA19063 | hp1 | a0001 | c0001 | t0002 | g0039 | EAS | JPT | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
NA19063 | hp2 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
NA19064 | hp1 | a0001 | c0001 | t0003 | g0004 | EAS | JPT | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
NA19064 | hp2 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
NA19065 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
NA19065 | hp2 | a0001 | c0001 | t0002 | g0013 | EAS | JPT | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
NA19066 | hp1 | a0001 | c0001 | t0003 | g0025 | EAS | JPT | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
NA19066 | hp2 | a0001 | c0001 | t0001 | g0053 | EAS | JPT | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
NA19067 | hp1 | a0001 | c0001 | t0003 | g0005 | EAS | JPT | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
NA19067 | hp2 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
NA19070 | hp1 | a0001 | c0001 | t0001 | g0003 | EAS | JPT | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
NA19070 | hp2 | a0001 | c0001 | t0001 | g0029 | EAS | JPT | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
NA19074 | hp1 | a0001 | c0001 | t0001 | g0030 | EAS | JPT | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
NA19074 | hp2 | a0001 | c0001 | t0001 | g0078 | EAS | JPT | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
NA19076 | hp1 | a0001 | c0001 | t0002 | g0002 | EAS | JPT | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
NA19076 | hp2 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
NA19077 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
NA19077 | hp2 | a0001 | c0001 | t0002 | g0002 | EAS | JPT | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
NA19079 | hp1 | a0001 | c0001 | t0001 | g0015 | EAS | JPT | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
NA19079 | hp2 | a0001 | c0001 | t0003 | g0005 | EAS | JPT | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
NA19082 | hp1 | a0001 | c0001 | t0001 | g0008 | EAS | JPT | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
NA19082 | hp2 | a0001 | c0001 | t0002 | g0101 | EAS | JPT | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
NA19083 | hp1 | a0001 | c0001 | t0002 | g0013 | EAS | JPT | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
NA19083 | hp2 | a0001 | c0001 | t0001 | g0003 | EAS | JPT | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
NA19087 | hp1 | a0001 | c0001 | t0001 | g0027 | EAS | JPT | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
NA19087 | hp2 | a0001 | c0001 | t0001 | g0003 | EAS | JPT | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
NA19240 | hp1 | a0001 | c0001 | t0001 | g0001 | AFR | YRI | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
NA19240 | hp2 | a0007 | c0006 | t0002 | g0098 | AFR | YRI | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
NA20129 | hp1 | a0001 | c0001 | t0002 | g0002 | AFR | ASW | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
NA20129 | hp2 | a0001 | c0001 | t0002 | g0017 | AFR | ASW | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
NA20752 | hp1 | a0001 | c0001 | t0003 | g0045 | EUR | TSI | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
NA20752 | hp2 | a0001 | c0001 | t0001 | g0033 | EUR | TSI | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
NA20805 | hp1 | a0001 | c0001 | t0001 | g0003 | EUR | TSI | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
NA20805 | hp2 | a0001 | c0001 | t0002 | g0023 | EUR | TSI | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
NA20905 | hp1 | a0001 | c0001 | t0003 | g0047 | SAS | GIH | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
NA20905 | hp2 | a0001 | c0001 | t0001 | g0079 | SAS | GIH | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
HG01123 | hp1 | a0001 | c0001 | t0003 | g0005 | AMR | CLM | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
HG01123 | hp2 | a0001 | c0001 | t0001 | g0001 | AMR | CLM | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
HG02109 | hp1 | a0001 | c0001 | t0002 | g0018 | AFR | ACB | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
HG02109 | hp2 | a0001 | c0001 | t0003 | g0024 | AFR | ACB | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
HG02486 | hp1 | a0001 | c0001 | t0007 | g0012 | AFR | ACB | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
HG02486 | hp2 | a0001 | c0002 | t0004 | g0009 | AFR | ACB | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
HG02559 | hp1 | a0001 | c0001 | t0002 | g0018 | AFR | ACB | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
HG02559 | hp2 | a0001 | c0001 | t0002 | g0002 | AFR | ACB | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
HG03471 | hp1 | a0001 | c0001 | t0002 | g0002 | AFR | MSL | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
HG03471 | hp2 | a0004 | c0005 | t0009 | g0028 | AFR | MSL | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
HG06807 | hp1 | a0001 | c0001 | t0002 | g0018 | AFR | USA | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
HG06807 | hp2 | a0001 | c0001 | t0002 | g0096 | AFR | USA | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
NA18955 | hp1 | a0001 | c0001 | t0001 | g0008 | EAS | JPT | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
NA18955 | hp2 | a0001 | c0001 | t0003 | g0120 | EAS | JPT | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
NA20300 | hp1 | a0001 | c0001 | t0018 | g0089 | AFR | USA | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
NA20300 | hp2 | a0001 | c0002 | t0004 | g0009 | AFR | USA | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
NA21309 | hp1 | a0002 | c0003 | t0005 | g0011 | AFR | LWK | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
NA21309 | hp2 | a0001 | c0001 | t0001 | g0083 | AFR | LWK | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
homoSapiens | chm13v2 | a0001 | c0001 | t0003 | g0026 | REF | REF | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
homoSapiens | grch38p0 | a0001 | c0001 | t0003 | g0005 | REF | REF | LRTM1_chr3_54913231_54933059 | LRTM1 | chr3 | 54913231 | 54933059 |
view | chr:pos | ref | alt | # # of ahapid:amino-acid(protein) level |
ahapids | # # of haplotypeids |
haplotypeids | annotation | impact | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length |
cds cds pos length |
aa aa pos length |
distance | status | chr | pos |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
chr3:54918617 | C | T | 1 | a0002 | 10 | HG01884.hp2 HG02630.hp1 HG02647.hp1 others(7): Show |
missense_variant | MODERATE | c.880G>A | p.Val294Ile | LRTM1 | ENSG00000144771.8 | transcript | ENST00000273286.6 | protein_coding | 3/3 | 1028/1414 | 880/1038 | 294/345 | chr3 | 54918617 | |||
chr3:54918700 | C | A | 1 | a0003 | 3 | HG01891.hp1 HG02809.hp1 HG03453.hp1 |
missense_variant | MODERATE | c.797G>T | p.Arg266Leu | LRTM1 | ENSG00000144771.8 | transcript | ENST00000273286.6 | protein_coding | 3/3 | 945/1414 | 797/1038 | 266/345 | chr3 | 54918700 | |||
chr3:54918704 | C | G | 1 | a0004 | 3 | HG02647.hp2 HG02809.hp2 HG03471.hp2 |
missense_variant | MODERATE | c.793G>C | p.Glu265Gln | LRTM1 | ENSG00000144771.8 | transcript | ENST00000273286.6 | protein_coding | 3/3 | 941/1414 | 793/1038 | 265/345 | chr3 | 54918704 | |||
chr3:54918707 | C | G | 1 | a0006 | 2 | HG02145.hp2 HG02630.hp2 |
missense_variant | MODERATE | c.790G>C | p.Gly264Arg | LRTM1 | ENSG00000144771.8 | transcript | ENST00000273286.6 | protein_coding | 3/3 | 938/1414 | 790/1038 | 264/345 | chr3 | 54918707 | |||
chr3:54918743 | C | T | 1 | a0007 | 2 | NA19030.hp2 NA19240.hp2 |
missense_variant | MODERATE | c.754G>A | p.Gly252Ser | LRTM1 | ENSG00000144771.8 | transcript | ENST00000273286.6 | protein_coding | 3/3 | 902/1414 | 754/1038 | 252/345 | chr3 | 54918743 | |||
chr3:54924735 | C | T | 1 | a0008 | 1 | HG02523.hp1 | missense_variant | MODERATE | c.488G>A | p.Arg163Gln | LRTM1 | ENSG00000144771.8 | transcript | ENST00000273286.6 | protein_coding | 2/3 | 636/1414 | 488/1038 | 163/345 | chr3 | 54924735 | |||
chr3:54925096 | C | T | 1 | a0005 | 3 | NA18970.hp1 NA18979.hp1 NA18992.hp2 |
missense_variant | MODERATE | c.127G>A | p.Glu43Lys | LRTM1 | ENSG00000144771.8 | transcript | ENST00000273286.6 | protein_coding | 2/3 | 275/1414 | 127/1038 | 43/345 | chr3 | 54925096 | |||
chr3:54925113 | C | A | 1 | a0009 | 1 | NA18522.hp2 | missense_variant | MODERATE | c.110G>T | p.Ser37Ile | LRTM1 | ENSG00000144771.8 | transcript | ENST00000273286.6 | protein_coding | 2/3 | 258/1414 | 110/1038 | 37/345 | chr3 | 54925113 |
view | chr:pos | ref | alt | # # of chapid |
chapids | # # of haplotypeids |
haplotypeids | annotation | impact | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length |
cds cds pos length |
aa aa pos length |
distance | status | chr | pos |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
chr3:54918495 | C | T | 1 | a0001c0013 | 1 | HG03710.hp1 | synonymous_variant | LOW | c.1002G>A | p.Val334Val | LRTM1 | ENSG00000144771.8 | transcript | ENST00000273286.6 | protein_coding | 3/3 | 1150/1414 | 1002/1038 | 334/345 | chr3 | 54918495 | |||
chr3:54918504 | A | G | 1 | a0001c0012 | 1 | HG01934.hp1 | synonymous_variant | LOW | c.993T>C | p.Pro331Pro | LRTM1 | ENSG00000144771.8 | transcript | ENST00000273286.6 | protein_coding | 3/3 | 1141/1414 | 993/1038 | 331/345 | chr3 | 54918504 | |||
chr3:54918612 | C | G | 1 | a0001c0008 | 2 | HG02965.hp1 NA18906.hp1 |
synonymous_variant | LOW | c.885G>C | p.Val295Val | LRTM1 | ENSG00000144771.8 | transcript | ENST00000273286.6 | protein_coding | 3/3 | 1033/1414 | 885/1038 | 295/345 | chr3 | 54918612 | |||
chr3:54918891 | C | T | 1 | a0001c0011 | 1 | NA18612.hp2 | splice_region_variant&synonymous_variant | LOW | c.606G>A | p.Gly202Gly | LRTM1 | ENSG00000144771.8 | transcript | ENST00000273286.6 | protein_coding | 3/3 | 754/1414 | 606/1038 | 202/345 | chr3 | 54918891 | |||
chr3:54924857 | A | G | 1 | a0001c0002 | 10 | HG01891.hp2 HG02257.hp2 HG02486.hp2 others(7): Show |
synonymous_variant | LOW | c.366T>C | p.Pro122Pro | LRTM1 | ENSG00000144771.8 | transcript | ENST00000273286.6 | protein_coding | 2/3 | 514/1414 | 366/1038 | 122/345 | chr3 | 54924857 | |||
chr3:54925115 | G | A | 1 | a0003c0015 | 1 | HG02809.hp1 | synonymous_variant | LOW | c.108C>T | p.Cys36Cys | LRTM1 | ENSG00000144771.8 | transcript | ENST00000273286.6 | protein_coding | 2/3 | 256/1414 | 108/1038 | 36/345 | chr3 | 54925115 |
view | chr:pos | ref | alt | # # of thapid:transcript level |
thapids | # # of haplotypeids |
haplotypeids | annotation | impact | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length |
cds cds pos length |
aa aa pos length |
distance | status | chr | pos |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
chr3:54918262 | A | G | 1 | a0001c0002t0004 | 10 | HG01891.hp2 HG02257.hp2 HG02486.hp2 others(7): Show |
3_prime_UTR_variant | MODIFIER | c.*197T>C | LRTM1 | ENSG00000144771.8 | transcript | ENST00000273286.6 | protein_coding | 3/3 | 197 | chr3 | 54918262 | ||||||
chr3:54918326 | TTTTTTC | T | 4 | a0001c0001t0015 a0001c0001t0020 a0002c0003t0005 others(1): Show |
12 | HG01884.hp2 HG02630.hp1 HG02647.hp1 others(9): Show |
3_prime_UTR_variant | MODIFIER | c.*127_*132delGAAAAA | LRTM1 | ENSG00000144771.8 | transcript | ENST00000273286.6 | protein_coding | 3/3 | 127 | chr3 | 54918326 | ||||||
chr3:54918327 | TTTTTC | T | 8 | a0001c0001t0001 a0001c0001t0012 a0001c0001t0014 others(5): Show |
154 | HG00099.hp2 HG00140.hp1 HG00280.hp2 others(151): Show |
3_prime_UTR_variant | MODIFIER | c.*127_*131delGAAAA | LRTM1 | ENSG00000144771.8 | transcript | ENST00000273286.6 | protein_coding | 3/3 | 127 | chr3 | 54918327 | ||||||
chr3:54918328 | TTTTC | T | 2 | a0001c0001t0006 a0001c0001t0007 |
10 | HG01243.hp1 HG01243.hp2 HG01981.hp2 others(7): Show |
3_prime_UTR_variant | MODIFIER | c.*127_*130delGAAA | LRTM1 | ENSG00000144771.8 | transcript | ENST00000273286.6 | protein_coding | 3/3 | 127 | chr3 | 54918328 | ||||||
chr3:54918329 | T | TTC | 3 | a0001c0001t0002 a0001c0002t0004 a0003c0009t0010 |
7 | HG01891.hp1 HG01891.hp2 HG02818.hp1 others(4): Show |
3_prime_UTR_variant | MODIFIER | c.*129_*130insGA | LRTM1 | ENSG00000144771.8 | transcript | ENST00000273286.6 | protein_coding | 3/3 | 129 | chr3 | 54918329 | ||||||
chr3:54918330 | T | TC | 7 | a0001c0001t0002 a0001c0001t0008 a0001c0001t0018 others(4): Show |
19 | HG01109.hp1 HG02257.hp2 HG02486.hp2 others(16): Show |
3_prime_UTR_variant | MODIFIER | c.*128_*129insG | LRTM1 | ENSG00000144771.8 | transcript | ENST00000273286.6 | protein_coding | 3/3 | 128 | chr3 | 54918330 | ||||||
chr3:54918331 | T | C | 1 | a0001c0001t0002 | 3 | HG02280.hp2 HG03195.hp2 NA19001.hp1 |
3_prime_UTR_variant | MODIFIER | c.*128A>G | LRTM1 | ENSG00000144771.8 | transcript | ENST00000273286.6 | protein_coding | 3/3 | 128 | chr3 | 54918331 | ||||||
chr3:54918332 | C | CT | 3 | a0001c0001t0002 a0001c0001t0003 a0001c0013t0002 |
17 | HG00639.hp2 HG01069.hp2 HG01071.hp1 others(14): Show |
3_prime_UTR_variant | MODIFIER | c.*126dupA | LRTM1 | ENSG00000144771.8 | transcript | ENST00000273286.6 | protein_coding | 3/3 | 126 | chr3 | 54918332 | ||||||
chr3:54918332 | C | CTTTT | 1 | a0001c0001t0002 | 10 | HG01081.hp1 HG01106.hp1 HG01346.hp1 others(7): Show |
3_prime_UTR_variant | MODIFIER | c.*123_*126dupAAAA | LRTM1 | ENSG00000144771.8 | transcript | ENST00000273286.6 | protein_coding | 3/3 | 126 | chr3 | 54918332 | ||||||
chr3:54918332 | C | T | 9 | a0001c0001t0002 a0001c0001t0008 a0001c0001t0018 others(6): Show |
37 | HG00423.hp1 HG01109.hp1 HG01891.hp1 others(34): Show |
3_prime_UTR_variant | MODIFIER | c.*127G>A | LRTM1 | ENSG00000144771.8 | transcript | ENST00000273286.6 | protein_coding | 3/3 | 127 | chr3 | 54918332 | ||||||
chr3:54918335 | T | C | 2 | a0001c0001t0006 a0001c0001t0007 |
10 | HG01243.hp1 HG01243.hp2 HG01981.hp2 others(7): Show |
3_prime_UTR_variant | MODIFIER | c.*124A>G | LRTM1 | ENSG00000144771.8 | transcript | ENST00000273286.6 | protein_coding | 3/3 | 124 | chr3 | 54918335 | ||||||
chr3:54918336 | T | C | 8 | a0001c0001t0001 a0001c0001t0012 a0001c0001t0014 others(5): Show |
154 | HG00099.hp2 HG00140.hp1 HG00280.hp2 others(151): Show |
3_prime_UTR_variant | MODIFIER | c.*123A>G | LRTM1 | ENSG00000144771.8 | transcript | ENST00000273286.6 | protein_coding | 3/3 | 123 | chr3 | 54918336 | ||||||
chr3:54918337 | T | C | 4 | a0001c0001t0008 a0001c0001t0015 a0002c0003t0005 others(1): Show |
16 | HG01884.hp2 HG02615.hp1 HG02630.hp1 others(13): Show |
3_prime_UTR_variant | MODIFIER | c.*122A>G | LRTM1 | ENSG00000144771.8 | transcript | ENST00000273286.6 | protein_coding | 3/3 | 122 | chr3 | 54918337 | ||||||
chr3:54918339 | T | C | 1 | a0001c0001t0011 | 4 | HG02818.hp2 HG02965.hp2 HG03139.hp1 others(1): Show |
3_prime_UTR_variant | MODIFIER | c.*120A>G | LRTM1 | ENSG00000144771.8 | transcript | ENST00000273286.6 | protein_coding | 3/3 | 120 | chr3 | 54918339 | ||||||
chr3:54918342 | T | C | 1 | a0002c0003t0019 | 1 | HG02970.hp1 | 3_prime_UTR_variant | MODIFIER | c.*117A>G | LRTM1 | ENSG00000144771.8 | transcript | ENST00000273286.6 | protein_coding | 3/3 | 117 | chr3 | 54918342 | ||||||
chr3:54918385 | C | T | 1 | a0001c0001t0018 | 1 | NA20300.hp1 | 3_prime_UTR_variant | MODIFIER | c.*74G>A | LRTM1 | ENSG00000144771.8 | transcript | ENST00000273286.6 | protein_coding | 3/3 | 74 | chr3 | 54918385 | ||||||
chr3:54918458 | C | A | 1 | a0004c0005t0016 | 1 | HG02809.hp2 | 3_prime_UTR_variant | MODIFIER | c.*1G>T | LRTM1 | ENSG00000144771.8 | transcript | ENST00000273286.6 | protein_coding | 3/3 | 1 | chr3 | 54918458 | ||||||
chr3:54927922 | C | T | 30 | a0001c0001t0001 a0001c0001t0002 a0001c0001t0006 others(27): Show |
275 | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(272): Show |
5_prime_UTR_variant | MODIFIER | c.-11G>A | LRTM1 | ENSG00000144771.8 | transcript | ENST00000273286.6 | protein_coding | 1/3 | 11 | chr3 | 54927922 | ||||||
chr3:54927976 | C | G | 1 | a0001c0001t0014 | 1 | HG03491.hp2 | 5_prime_UTR_premature_start_codon_gain_variant | LOW | c.-65G>C | LRTM1 | ENSG00000144771.8 | transcript | ENST00000273286.6 | protein_coding | 1/3 | chr3 | 54927976 | |||||||
chr3:54927980 | A | G | 7 | a0001c0001t0010 a0001c0001t0018 a0001c0002t0004 others(4): Show |
25 | HG01884.hp2 HG01891.hp1 HG01891.hp2 others(22): Show |
5_prime_UTR_variant | MODIFIER | c.-69T>C | LRTM1 | ENSG00000144771.8 | transcript | ENST00000273286.6 | protein_coding | 1/3 | 69 | chr3 | 54927980 | ||||||
chr3:54927986 | A | C | 13 | a0001c0001t0001 a0001c0001t0006 a0001c0001t0009 others(10): Show |
163 | HG00099.hp2 HG00140.hp1 HG00280.hp2 others(160): Show |
5_prime_UTR_variant | MODIFIER | c.-75T>G | LRTM1 | ENSG00000144771.8 | transcript | ENST00000273286.6 | protein_coding | 1/3 | 75 | chr3 | 54927986 | ||||||
chr3:54928005 | G | A | 1 | a0001c0001t0021 | 1 | NA18970.hp2 | 5_prime_UTR_premature_start_codon_gain_variant | LOW | c.-94C>T | LRTM1 | ENSG00000144771.8 | transcript | ENST00000273286.6 | protein_coding | 1/3 | chr3 | 54928005 | |||||||
chr3:54928005 | G | C | 1 | a0001c0001t0013 | 2 | HG03098.hp1 HG03486.hp2 |
5_prime_UTR_variant | MODIFIER | c.-94C>G | LRTM1 | ENSG00000144771.8 | transcript | ENST00000273286.6 | protein_coding | 1/3 | 94 | chr3 | 54928005 |
view | chr:pos | ref | alt | # # of ghapid:genebody level |
ghapids | # # of haplotypeids |
haplotypeids | annotation | impact | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | genebody_biotype | rank | cdna cdna pos length |
cds cds pos length |
aa aa pos length |
distance | status | chr | pos |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
chr3:54918936 | A | G | 1 | a0001c0001t0018g0089 | 1 | NA20300.hp1 | intron_variant | MODIFIER | c.605-44T>C | LRTM1 | ENSG00000144771.8 | transcript | ENST00000273286.6 | protein_coding | 2/2 | chr3 | 54918936 | |||||||
chr3:54918994 | CCT | C | 4 | a0002c0003t0005g0011 a0002c0003t0005g0035 a0002c0003t0005g0036 others(1): Show |
10 | HG01884.hp2 HG02630.hp1 HG02647.hp1 others(7): Show |
intron_variant | MODIFIER | c.605-104_605-103del others(2): Show |
LRTM1 | ENSG00000144771.8 | transcript | ENST00000273286.6 | protein_coding | 2/2 | chr3 | 54918994 | |||||||
chr3:54918995 | CTT | C | 70 | a0001c0001t0001g0001 a0001c0001t0001g0003 a0001c0001t0001g0006 others(67): Show |
200 | HG00099.hp2 HG00140.hp1 HG00280.hp2 others(197): Show |
intron_variant | MODIFIER | c.605-105_605-104del others(2): Show |
LRTM1 | ENSG00000144771.8 | transcript | ENST00000273286.6 | protein_coding | 2/2 | chr3 | 54918995 | |||||||
chr3:54918997 | T | G | 4 | a0002c0003t0005g0011 a0002c0003t0005g0035 a0002c0003t0005g0036 others(1): Show |
10 | HG01884.hp2 HG02630.hp1 HG02647.hp1 others(7): Show |
intron_variant | MODIFIER | c.605-105A>C | LRTM1 | ENSG00000144771.8 | transcript | ENST00000273286.6 | protein_coding | 2/2 | chr3 | 54918997 | |||||||
chr3:54919024 | G | T | 5 | a0001c0001t0002g0013 a0001c0001t0002g0113 a0001c0001t0020g0111 others(2): Show |
9 | HG00423.hp1 HG02145.hp2 HG02630.hp2 others(6): Show |
intron_variant | MODIFIER | c.605-132C>A | LRTM1 | ENSG00000144771.8 | transcript | ENST00000273286.6 | protein_coding | 2/2 | chr3 | 54919024 | |||||||
chr3:54919041 | T | C | 5 | a0001c0001t0018g0089 a0002c0003t0005g0011 a0002c0003t0005g0035 others(2): Show |
11 | HG01884.hp2 HG02630.hp1 HG02647.hp1 others(8): Show |
intron_variant | MODIFIER | c.605-149A>G | LRTM1 | ENSG00000144771.8 | transcript | ENST00000273286.6 | protein_coding | 2/2 | chr3 | 54919041 | |||||||
chr3:54919100 | C | T | 1 | a0001c0001t0002g0097 | 1 | HG02922.hp1 | intron_variant | MODIFIER | c.605-208G>A | LRTM1 | ENSG00000144771.8 | transcript | ENST00000273286.6 | protein_coding | 2/2 | chr3 | 54919100 | |||||||
chr3:54919192 | C | G | 2 | a0003c0009t0010g0034 a0003c0015t0010g0090 |
3 | HG01891.hp1 HG02809.hp1 HG03453.hp1 |
intron_variant | MODIFIER | c.605-300G>C | LRTM1 | ENSG00000144771.8 | transcript | ENST00000273286.6 | protein_coding | 2/2 | chr3 | 54919192 | |||||||
chr3:54919205 | G | A | 1 | a0001c0001t0010g0094 | 1 | HG02258.hp1 | intron_variant | MODIFIER | c.605-313C>T | LRTM1 | ENSG00000144771.8 | transcript | ENST00000273286.6 | protein_coding | 2/2 | chr3 | 54919205 | |||||||
chr3:54919337 | G | A | 1 | a0001c0001t0003g0048 | 2 | HG01256.hp1 HG01258.hp2 |
intron_variant | MODIFIER | c.605-445C>T | LRTM1 | ENSG00000144771.8 | transcript | ENST00000273286.6 | protein_coding | 2/2 | chr3 | 54919337 | |||||||
chr3:54919436 | C | T | 3 | a0001c0001t0002g0041 a0001c0001t0002g0110 a0009c0014t0002g0114 |
4 | HG01109.hp1 HG03579.hp2 NA18522.hp2 others(1): Show |
intron_variant | MODIFIER | c.605-544G>A | LRTM1 | ENSG00000144771.8 | transcript | ENST00000273286.6 | protein_coding | 2/2 | chr3 | 54919436 | |||||||
chr3:54919465 | G | A | 4 | a0001c0001t0002g0010 a0001c0001t0002g0099 a0001c0001t0002g0103 others(1): Show |
9 | HG00099.hp1 HG00639.hp2 HG01069.hp2 others(6): Show |
intron_variant | MODIFIER | c.605-573C>T | LRTM1 | ENSG00000144771.8 | transcript | ENST00000273286.6 | protein_coding | 2/2 | chr3 | 54919465 | |||||||
chr3:54919472 | T | C | 1 | a0001c0001t0001g0073 | 1 | HG03654.hp1 | intron_variant | MODIFIER | c.605-580A>G | LRTM1 | ENSG00000144771.8 | transcript | ENST00000273286.6 | protein_coding | 2/2 | chr3 | 54919472 | |||||||
chr3:54919475 | A | G | 1 | a0001c0001t0001g0070 | 1 | HG01975.hp2 | intron_variant | MODIFIER | c.605-583T>C | LRTM1 | ENSG00000144771.8 | transcript | ENST00000273286.6 | protein_coding | 2/2 | chr3 | 54919475 | |||||||
chr3:54919528 | G | T | 1 | a0001c0001t0002g0100 | 1 | NA19001.hp1 | intron_variant | MODIFIER | c.605-636C>A | LRTM1 | ENSG00000144771.8 | transcript | ENST00000273286.6 | protein_coding | 2/2 | chr3 | 54919528 | |||||||
chr3:54919695 | A | C | 1 | a0001c0001t0001g0058 | 1 | HG01074.hp2 | intron_variant | MODIFIER | c.605-803T>G | LRTM1 | ENSG00000144771.8 | transcript | ENST00000273286.6 | protein_coding | 2/2 | chr3 | 54919695 | |||||||
chr3:54919814 | A | T | 20 | a0001c0001t0002g0002 a0001c0001t0002g0010 a0001c0001t0002g0022 others(17): Show |
50 | HG00099.hp1 HG00408.hp1 HG00639.hp2 others(47): Show |
intron_variant | MODIFIER | c.605-922T>A | LRTM1 | ENSG00000144771.8 | transcript | ENST00000273286.6 | protein_coding | 2/2 | chr3 | 54919814 | |||||||
chr3:54919907 | G | A | 1 | a0001c0001t0001g0074 | 1 | HG02273.hp2 | intron_variant | MODIFIER | c.605-1015C>T | LRTM1 | ENSG00000144771.8 | transcript | ENST00000273286.6 | protein_coding | 2/2 | chr3 | 54919907 | |||||||
chr3:54919937 | G | A | 1 | a0001c0001t0001g0082 | 1 | HG01981.hp1 | intron_variant | MODIFIER | c.605-1045C>T | LRTM1 | ENSG00000144771.8 | transcript | ENST00000273286.6 | protein_coding | 2/2 | chr3 | 54919937 | |||||||
chr3:54919971 | C | T | 78 | a0001c0001t0001g0001 a0001c0001t0001g0003 a0001c0001t0001g0006 others(75): Show |
214 | HG00099.hp2 HG00140.hp1 HG00280.hp2 others(211): Show |
intron_variant | MODIFIER | c.605-1079G>A | LRTM1 | ENSG00000144771.8 | transcript | ENST00000273286.6 | protein_coding | 2/2 | chr3 | 54919971 | |||||||
chr3:54919999 | T | C | 102 | a0001c0001t0001g0001 a0001c0001t0001g0003 a0001c0001t0001g0006 others(99): Show |
274 | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(271): Show |
intron_variant | MODIFIER | c.605-1107A>G | LRTM1 | ENSG00000144771.8 | transcript | ENST00000273286.6 | protein_coding | 2/2 | chr3 | 54919999 | |||||||
chr3:54920088 | A | T | 102 | a0001c0001t0001g0001 a0001c0001t0001g0003 a0001c0001t0001g0006 others(99): Show |
274 | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(271): Show |
intron_variant | MODIFIER | c.605-1196T>A | LRTM1 | ENSG00000144771.8 | transcript | ENST00000273286.6 | protein_coding | 2/2 | chr3 | 54920088 | |||||||
chr3:54920202 | T | C | 1 | a0001c0001t0001g0029 | 2 | NA19012.hp1 NA19070.hp2 |
intron_variant | MODIFIER | c.605-1310A>G | LRTM1 | ENSG00000144771.8 | transcript | ENST00000273286.6 | protein_coding | 2/2 | chr3 | 54920202 | |||||||
chr3:54920260 | A | G | 22 | a0001c0001t0001g0069 a0001c0001t0001g0078 a0001c0001t0002g0002 others(19): Show |
52 | HG00099.hp1 HG00408.hp1 HG00639.hp2 others(49): Show |
intron_variant | MODIFIER | c.605-1368T>C | LRTM1 | ENSG00000144771.8 | transcript | ENST00000273286.6 | protein_coding | 2/2 | chr3 | 54920260 | |||||||
chr3:54920302 | T | G | 20 | a0001c0001t0002g0002 a0001c0001t0002g0010 a0001c0001t0002g0022 others(17): Show |
50 | HG00099.hp1 HG00408.hp1 HG00639.hp2 others(47): Show |
intron_variant | MODIFIER | c.605-1410A>C | LRTM1 | ENSG00000144771.8 | transcript | ENST00000273286.6 | protein_coding | 2/2 | chr3 | 54920302 | |||||||
chr3:54920410 | AC | A | 19 | a0001c0001t0002g0002 a0001c0001t0002g0010 a0001c0001t0002g0022 others(16): Show |
49 | HG00099.hp1 HG00408.hp1 HG00639.hp2 others(46): Show |
intron_variant | MODIFIER | c.605-1519delG | LRTM1 | ENSG00000144771.8 | transcript | ENST00000273286.6 | protein_coding | 2/2 | chr3 | 54920410 | |||||||
chr3:54920421 | G | C | 103 | a0001c0001t0001g0001 a0001c0001t0001g0003 a0001c0001t0001g0006 others(100): Show |
275 | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(272): Show |
intron_variant | MODIFIER | c.605-1529C>G | LRTM1 | ENSG00000144771.8 | transcript | ENST00000273286.6 | protein_coding | 2/2 | chr3 | 54920421 | |||||||
chr3:54920434 | C | T | 19 | a0001c0001t0002g0002 a0001c0001t0002g0010 a0001c0001t0002g0022 others(16): Show |
49 | HG00099.hp1 HG00408.hp1 HG00639.hp2 others(46): Show |
intron_variant | MODIFIER | c.605-1542G>A | LRTM1 | ENSG00000144771.8 | transcript | ENST00000273286.6 | protein_coding | 2/2 | chr3 | 54920434 | |||||||
chr3:54920631 | A | G | 83 | a0001c0001t0001g0001 a0001c0001t0001g0003 a0001c0001t0001g0006 others(80): Show |
225 | HG00099.hp2 HG00140.hp1 HG00280.hp2 others(222): Show |
intron_variant | MODIFIER | c.605-1739T>C | LRTM1 | ENSG00000144771.8 | transcript | ENST00000273286.6 | protein_coding | 2/2 | chr3 | 54920631 | |||||||
chr3:54920703 | T | C | 84 | a0001c0001t0001g0001 a0001c0001t0001g0003 a0001c0001t0001g0006 others(81): Show |
226 | HG00099.hp2 HG00140.hp1 HG00280.hp2 others(223): Show |
intron_variant | MODIFIER | c.605-1811A>G | LRTM1 | ENSG00000144771.8 | transcript | ENST00000273286.6 | protein_coding | 2/2 | chr3 | 54920703 | |||||||
chr3:54920768 | C | T | 1 | a0001c0001t0003g0125 | 1 | HG01361.hp1 | intron_variant | MODIFIER | c.605-1876G>A | LRTM1 | ENSG00000144771.8 | transcript | ENST00000273286.6 | protein_coding | 2/2 | chr3 | 54920768 | |||||||
chr3:54920802 | G | A | 6 | a0001c0001t0002g0017 a0001c0001t0002g0018 a0001c0001t0002g0104 others(3): Show |
12 | HG01081.hp1 HG01106.hp1 HG01346.hp1 others(9): Show |
intron_variant | MODIFIER | c.605-1910C>T | LRTM1 | ENSG00000144771.8 | transcript | ENST00000273286.6 | protein_coding | 2/2 | chr3 | 54920802 | |||||||
chr3:54920832 | A | G | 1 | a0001c0001t0002g0037 | 2 | HG03491.hp1 HG03492.hp2 |
intron_variant | MODIFIER | c.605-1940T>C | LRTM1 | ENSG00000144771.8 | transcript | ENST00000273286.6 | protein_coding | 2/2 | chr3 | 54920832 | |||||||
chr3:54920879 | G | C | 1 | a0001c0001t0001g0061 | 1 | NA18956.hp2 | intron_variant | MODIFIER | c.605-1987C>G | LRTM1 | ENSG00000144771.8 | transcript | ENST00000273286.6 | protein_coding | 2/2 | chr3 | 54920879 | |||||||
chr3:54920938 | G | A | 1 | a0004c0005t0009g0028 | 2 | HG02647.hp2 HG03471.hp2 |
intron_variant | MODIFIER | c.605-2046C>T | LRTM1 | ENSG00000144771.8 | transcript | ENST00000273286.6 | protein_coding | 2/2 | chr3 | 54920938 | |||||||
chr3:54921085 | C | T | 1 | a0001c0001t0001g0068 | 1 | NA18747.hp2 | intron_variant | MODIFIER | c.605-2193G>A | LRTM1 | ENSG00000144771.8 | transcript | ENST00000273286.6 | protein_coding | 2/2 | chr3 | 54921085 | |||||||
chr3:54921181 | TAGCTCTT others(15): Show |
T | 80 | a0001c0001t0001g0001 a0001c0001t0001g0003 a0001c0001t0001g0006 others(77): Show |
219 | HG00099.hp2 HG00140.hp1 HG00280.hp2 others(216): Show |
intron_variant | MODIFIER | c.605-2311_605-2290d others(24): Show |
LRTM1 | ENSG00000144771.8 | transcript | ENST00000273286.6 | protein_coding | 2/2 | chr3 | 54921181 | |||||||
chr3:54921211 | A | G | 1 | a0001c0001t0002g0117 | 1 | HG02895.hp2 | intron_variant | MODIFIER | c.605-2319T>C | LRTM1 | ENSG00000144771.8 | transcript | ENST00000273286.6 | protein_coding | 2/2 | chr3 | 54921211 | |||||||
chr3:54921238 | C | T | 1 | a0001c0002t0004g0088 | 1 | HG03516.hp2 | intron_variant | MODIFIER | c.605-2346G>A | LRTM1 | ENSG00000144771.8 | transcript | ENST00000273286.6 | protein_coding | 2/2 | chr3 | 54921238 | |||||||
chr3:54921283 | C | T | 4 | a0001c0001t0003g0049 a0001c0001t0003g0124 a0001c0001t0003g0127 others(1): Show |
5 | HG02015.hp1 HG02083.hp1 HG02523.hp2 others(2): Show |
intron_variant | MODIFIER | c.605-2391G>A | LRTM1 | ENSG00000144771.8 | transcript | ENST00000273286.6 | protein_coding | 2/2 | chr3 | 54921283 | |||||||
chr3:54921304 | G | A | 1 | a0001c0001t0001g0076 | 1 | NA18961.hp2 | intron_variant | MODIFIER | c.605-2412C>T | LRTM1 | ENSG00000144771.8 | transcript | ENST00000273286.6 | protein_coding | 2/2 | chr3 | 54921304 | |||||||
chr3:54921313 | G | A | 1 | a0001c0001t0008g0116 | 1 | HG02615.hp1 | intron_variant | MODIFIER | c.605-2421C>T | LRTM1 | ENSG00000144771.8 | transcript | ENST00000273286.6 | protein_coding | 2/2 | chr3 | 54921313 | |||||||
chr3:54921389 | C | T | 1 | a0001c0001t0002g0106 | 1 | HG01433.hp2 | intron_variant | MODIFIER | c.605-2497G>A | LRTM1 | ENSG00000144771.8 | transcript | ENST00000273286.6 | protein_coding | 2/2 | chr3 | 54921389 | |||||||
chr3:54921400 | G | A | 80 | a0001c0001t0001g0001 a0001c0001t0001g0003 a0001c0001t0001g0006 others(77): Show |
219 | HG00099.hp2 HG00140.hp1 HG00280.hp2 others(216): Show |
intron_variant | MODIFIER | c.605-2508C>T | LRTM1 | ENSG00000144771.8 | transcript | ENST00000273286.6 | protein_coding | 2/2 | chr3 | 54921400 | |||||||
chr3:54921454 | T | C | 1 | a0001c0001t0003g0126 | 1 | HG00438.hp2 | intron_variant | MODIFIER | c.605-2562A>G | LRTM1 | ENSG00000144771.8 | transcript | ENST00000273286.6 | protein_coding | 2/2 | chr3 | 54921454 | |||||||
chr3:54921458 | T | C | 52 | a0001c0001t0001g0001 a0001c0001t0001g0003 a0001c0001t0001g0006 others(49): Show |
167 | HG00099.hp2 HG00140.hp1 HG00280.hp2 others(164): Show |
intron_variant | MODIFIER | c.605-2566A>G | LRTM1 | ENSG00000144771.8 | transcript | ENST00000273286.6 | protein_coding | 2/2 | chr3 | 54921458 | |||||||
chr3:54921494 | A | C | 1 | a0001c0001t0002g0115 | 1 | HG03209.hp2 | intron_variant | MODIFIER | c.605-2602T>G | LRTM1 | ENSG00000144771.8 | transcript | ENST00000273286.6 | protein_coding | 2/2 | chr3 | 54921494 | |||||||
chr3:54921742 | G | A | 1 | a0001c0001t0003g0128 | 1 | HG00621.hp1 | intron_variant | MODIFIER | c.605-2850C>T | LRTM1 | ENSG00000144771.8 | transcript | ENST00000273286.6 | protein_coding | 2/2 | chr3 | 54921742 | |||||||
chr3:54921743 | T | G | 82 | a0001c0001t0001g0001 a0001c0001t0001g0003 a0001c0001t0001g0006 others(79): Show |
221 | HG00099.hp2 HG00140.hp1 HG00280.hp2 others(218): Show |
intron_variant | MODIFIER | c.605-2851A>C | LRTM1 | ENSG00000144771.8 | transcript | ENST00000273286.6 | protein_coding | 2/2 | chr3 | 54921743 | |||||||
chr3:54921781 | G | A | 1 | a0001c0001t0002g0042 | 2 | HG02280.hp2 HG03195.hp2 |
intron_variant | MODIFIER | c.604+2838C>T | LRTM1 | ENSG00000144771.8 | transcript | ENST00000273286.6 | protein_coding | 2/2 | chr3 | 54921781 | |||||||
chr3:54921871 | G | T | 5 | a0001c0001t0002g0017 a0001c0001t0002g0104 a0001c0001t0002g0105 others(2): Show |
8 | HG01081.hp1 HG01106.hp1 HG01346.hp1 others(5): Show |
intron_variant | MODIFIER | c.604+2748C>A | LRTM1 | ENSG00000144771.8 | transcript | ENST00000273286.6 | protein_coding | 2/2 | chr3 | 54921871 | |||||||
chr3:54921892 | GTTTGCAT others(54): Show |
G | 1 | a0001c0001t0002g0023 | 3 | HG01346.hp2 HG02145.hp1 NA20805.hp2 |
intron_variant | MODIFIER | c.604+2666_604+2726d others(63): Show |
LRTM1 | ENSG00000144771.8 | transcript | ENST00000273286.6 | protein_coding | 2/2 | chr3 | 54921892 | |||||||
chr3:54921907 | T | G | 1 | a0001c0001t0003g0004 | 1 | HG01256.hp2 | intron_variant | MODIFIER | c.604+2712A>C | LRTM1 | ENSG00000144771.8 | transcript | ENST00000273286.6 | protein_coding | 2/2 | chr3 | 54921907 | |||||||
chr3:54921995 | T | A | 3 | a0001c0001t0020g0111 a0006c0007t0002g0109 a0006c0007t0002g0112 |
3 | HG02145.hp2 HG02630.hp2 NA19030.hp1 |
intron_variant | MODIFIER | c.604+2624A>T | LRTM1 | ENSG00000144771.8 | transcript | ENST00000273286.6 | protein_coding | 2/2 | chr3 | 54921995 | |||||||
chr3:54922174 | C | G | 1 | a0001c0001t0001g0067 | 1 | NA18943.hp1 | intron_variant | MODIFIER | c.604+2445G>C | LRTM1 | ENSG00000144771.8 | transcript | ENST00000273286.6 | protein_coding | 2/2 | chr3 | 54922174 | |||||||
chr3:54922274 | C | G | 93 | a0001c0001t0001g0001 a0001c0001t0001g0003 a0001c0001t0001g0006 others(90): Show |
241 | HG00099.hp2 HG00140.hp1 HG00280.hp2 others(238): Show |
intron_variant | MODIFIER | c.604+2345G>C | LRTM1 | ENSG00000144771.8 | transcript | ENST00000273286.6 | protein_coding | 2/2 | chr3 | 54922274 | |||||||
chr3:54922320 | CT | C | 20 | a0001c0001t0001g0030 a0001c0001t0001g0078 a0001c0001t0002g0100 others(17): Show |
31 | HG00621.hp1 HG01167.hp1 HG01167.hp2 others(28): Show |
intron_variant | MODIFIER | c.604+2298delA | LRTM1 | ENSG00000144771.8 | transcript | ENST00000273286.6 | protein_coding | 2/2 | chr3 | 54922320 | |||||||
chr3:54922337 | T | A | 2 | a0001c0001t0001g0062 a0001c0001t0002g0101 |
2 | HG01516.hp2 NA19082.hp2 |
intron_variant | MODIFIER | c.604+2282A>T | LRTM1 | ENSG00000144771.8 | transcript | ENST00000273286.6 | protein_coding | 2/2 | chr3 | 54922337 | |||||||
chr3:54922543 | T | C | 1 | a0001c0001t0002g0115 | 1 | HG03209.hp2 | intron_variant | MODIFIER | c.604+2076A>G | LRTM1 | ENSG00000144771.8 | transcript | ENST00000273286.6 | protein_coding | 2/2 | chr3 | 54922543 | |||||||
chr3:54922639 | A | G | 1 | a0001c0001t0002g0115 | 1 | HG03209.hp2 | intron_variant | MODIFIER | c.604+1980T>C | LRTM1 | ENSG00000144771.8 | transcript | ENST00000273286.6 | protein_coding | 2/2 | chr3 | 54922639 | |||||||
chr3:54922701 | C | T | 1 | a0001c0002t0004g0088 | 1 | HG03516.hp2 | intron_variant | MODIFIER | c.604+1918G>A | LRTM1 | ENSG00000144771.8 | transcript | ENST00000273286.6 | protein_coding | 2/2 | chr3 | 54922701 | |||||||
chr3:54922738 | C | T | 2 | a0001c0002t0004g0092 a0001c0002t0004g0093 |
2 | HG03453.hp2 NA18906.hp2 |
intron_variant | MODIFIER | c.604+1881G>A | LRTM1 | ENSG00000144771.8 | transcript | ENST00000273286.6 | protein_coding | 2/2 | chr3 | 54922738 | |||||||
chr3:54922797 | C | T | 5 | a0001c0001t0002g0042 a0001c0001t0008g0043 a0001c0001t0008g0044 others(2): Show |
8 | HG02280.hp2 HG02615.hp1 HG02886.hp1 others(5): Show |
intron_variant | MODIFIER | c.604+1822G>A | LRTM1 | ENSG00000144771.8 | transcript | ENST00000273286.6 | protein_coding | 2/2 | chr3 | 54922797 | |||||||
chr3:54922816 | C | T | 1 | a0001c0001t0001g0066 | 1 | NA19060.hp2 | intron_variant | MODIFIER | c.604+1803G>A | LRTM1 | ENSG00000144771.8 | transcript | ENST00000273286.6 | protein_coding | 2/2 | chr3 | 54922816 | |||||||
chr3:54923162 | A | G | 1 | a0001c0002t0004g0088 | 1 | HG03516.hp2 | intron_variant | MODIFIER | c.604+1457T>C | LRTM1 | ENSG00000144771.8 | transcript | ENST00000273286.6 | protein_coding | 2/2 | chr3 | 54923162 | |||||||
chr3:54923329 | A | C | 1 | a0001c0001t0002g0096 | 1 | HG06807.hp2 | intron_variant | MODIFIER | c.604+1290T>G | LRTM1 | ENSG00000144771.8 | transcript | ENST00000273286.6 | protein_coding | 2/2 | chr3 | 54923329 | |||||||
chr3:54923380 | C | T | 1 | a0001c0001t0018g0089 | 1 | NA20300.hp1 | intron_variant | MODIFIER | c.604+1239G>A | LRTM1 | ENSG00000144771.8 | transcript | ENST00000273286.6 | protein_coding | 2/2 | chr3 | 54923380 | |||||||
chr3:54923445 | G | A | 1 | a0001c0001t0018g0089 | 1 | NA20300.hp1 | intron_variant | MODIFIER | c.604+1174C>T | LRTM1 | ENSG00000144771.8 | transcript | ENST00000273286.6 | protein_coding | 2/2 | chr3 | 54923445 | |||||||
chr3:54923488 | A | G | 2 | a0001c0002t0004g0009 a0001c0002t0004g0088 |
8 | HG01891.hp2 HG02257.hp2 HG02486.hp2 others(5): Show |
intron_variant | MODIFIER | c.604+1131T>C | LRTM1 | ENSG00000144771.8 | transcript | ENST00000273286.6 | protein_coding | 2/2 | chr3 | 54923488 | |||||||
chr3:54923496 | C | T | 3 | a0001c0001t0001g0016 a0001c0001t0006g0065 a0001c0012t0001g0064 |
6 | HG01243.hp1 HG01934.hp1 HG02280.hp1 others(3): Show |
intron_variant | MODIFIER | c.604+1123G>A | LRTM1 | ENSG00000144771.8 | transcript | ENST00000273286.6 | protein_coding | 2/2 | chr3 | 54923496 | |||||||
chr3:54923925 | C | T | 1 | a0001c0001t0010g0094 | 1 | HG02258.hp1 | intron_variant | MODIFIER | c.604+694G>A | LRTM1 | ENSG00000144771.8 | transcript | ENST00000273286.6 | protein_coding | 2/2 | chr3 | 54923925 | |||||||
chr3:54923962 | A | C | 8 | a0001c0002t0004g0009 a0001c0002t0004g0088 a0001c0002t0004g0092 others(5): Show |
20 | HG01884.hp2 HG01891.hp2 HG02257.hp2 others(17): Show |
intron_variant | MODIFIER | c.604+657T>G | LRTM1 | ENSG00000144771.8 | transcript | ENST00000273286.6 | protein_coding | 2/2 | chr3 | 54923962 | |||||||
chr3:54924084 | A | G | 1 | a0001c0001t0002g0105 | 1 | HG03831.hp1 | intron_variant | MODIFIER | c.604+535T>C | LRTM1 | ENSG00000144771.8 | transcript | ENST00000273286.6 | protein_coding | 2/2 | chr3 | 54924084 | |||||||
chr3:54924298 | G | C | 1 | a0001c0001t0018g0089 | 1 | NA20300.hp1 | intron_variant | MODIFIER | c.604+321C>G | LRTM1 | ENSG00000144771.8 | transcript | ENST00000273286.6 | protein_coding | 2/2 | chr3 | 54924298 | |||||||
chr3:54924514 | C | T | 1 | a0001c0001t0002g0115 | 1 | HG03209.hp2 | intron_variant | MODIFIER | c.604+105G>A | LRTM1 | ENSG00000144771.8 | transcript | ENST00000273286.6 | protein_coding | 2/2 | chr3 | 54924514 | |||||||
chr3:54925510 | G | C | 3 | a0001c0002t0004g0009 a0001c0002t0004g0092 a0001c0002t0004g0093 |
9 | HG01891.hp2 HG02257.hp2 HG02486.hp2 others(6): Show |
intron_variant | MODIFIER | c.8-295C>G | LRTM1 | ENSG00000144771.8 | transcript | ENST00000273286.6 | protein_coding | 1/2 | chr3 | 54925510 | |||||||
chr3:54925818 | A | G | 2 | a0001c0001t0001g0021 a0001c0001t0001g0062 |
4 | HG01074.hp1 HG01168.hp2 HG01169.hp2 others(1): Show |
intron_variant | MODIFIER | c.8-603T>C | LRTM1 | ENSG00000144771.8 | transcript | ENST00000273286.6 | protein_coding | 1/2 | chr3 | 54925818 | |||||||
chr3:54925851 | C | T | 1 | a0001c0001t0002g0042 | 2 | HG02280.hp2 HG03195.hp2 |
intron_variant | MODIFIER | c.8-636G>A | LRTM1 | ENSG00000144771.8 | transcript | ENST00000273286.6 | protein_coding | 1/2 | chr3 | 54925851 | |||||||
chr3:54925893 | T | C | 1 | a0001c0001t0001g0079 | 1 | NA20905.hp2 | intron_variant | MODIFIER | c.8-678A>G | LRTM1 | ENSG00000144771.8 | transcript | ENST00000273286.6 | protein_coding | 1/2 | chr3 | 54925893 | |||||||
chr3:54926073 | G | C | 1 | a0001c0001t0001g0083 | 1 | NA21309.hp2 | intron_variant | MODIFIER | c.8-858C>G | LRTM1 | ENSG00000144771.8 | transcript | ENST00000273286.6 | protein_coding | 1/2 | chr3 | 54926073 | |||||||
chr3:54926119 | C | T | 1 | a0001c0001t0010g0094 | 1 | HG02258.hp1 | intron_variant | MODIFIER | c.8-904G>A | LRTM1 | ENSG00000144771.8 | transcript | ENST00000273286.6 | protein_coding | 1/2 | chr3 | 54926119 | |||||||
chr3:54926285 | G | A | 57 | a0001c0001t0001g0001 a0001c0001t0001g0003 a0001c0001t0001g0006 others(54): Show |
172 | HG00099.hp2 HG00140.hp1 HG00280.hp2 others(169): Show |
intron_variant | MODIFIER | c.8-1070C>T | LRTM1 | ENSG00000144771.8 | transcript | ENST00000273286.6 | protein_coding | 1/2 | chr3 | 54926285 | |||||||
chr3:54926351 | A | G | 1 | a0001c0001t0002g0095 | 1 | HG00408.hp1 | intron_variant | MODIFIER | c.8-1136T>C | LRTM1 | ENSG00000144771.8 | transcript | ENST00000273286.6 | protein_coding | 1/2 | chr3 | 54926351 | |||||||
chr3:54926355 | C | T | 57 | a0001c0001t0001g0001 a0001c0001t0001g0003 a0001c0001t0001g0006 others(54): Show |
172 | HG00099.hp2 HG00140.hp1 HG00280.hp2 others(169): Show |
intron_variant | MODIFIER | c.8-1140G>A | LRTM1 | ENSG00000144771.8 | transcript | ENST00000273286.6 | protein_coding | 1/2 | chr3 | 54926355 | |||||||
chr3:54926466 | G | T | 1 | a0001c0002t0004g0088 | 1 | HG03516.hp2 | intron_variant | MODIFIER | c.8-1251C>A | LRTM1 | ENSG00000144771.8 | transcript | ENST00000273286.6 | protein_coding | 1/2 | chr3 | 54926466 | |||||||
chr3:54926505 | T | TAC | 10 | a0001c0001t0003g0004 a0001c0001t0003g0025 a0001c0001t0003g0048 others(7): Show |
26 | HG00140.hp2 HG00438.hp2 HG00621.hp1 others(23): Show |
intron_variant | MODIFIER | c.8-1292_8-1291dupGT | LRTM1 | ENSG00000144771.8 | transcript | ENST00000273286.6 | protein_coding | 1/2 | chr3 | 54926505 | |||||||
chr3:54926505 | T | TACAC | 4 | a0001c0001t0003g0026 a0001c0001t0003g0049 a0001c0001t0003g0050 others(1): Show |
7 | HG02155.hp1 HG02300.hp1 HG02615.hp1 others(4): Show |
intron_variant | MODIFIER | c.8-1294_8-1291dupGT others(2): Show |
LRTM1 | ENSG00000144771.8 | transcript | ENST00000273286.6 | protein_coding | 1/2 | chr3 | 54926505 | |||||||
chr3:54926505 | T | TACACACA others(3): Show |
1 | a0001c0001t0003g0130 | 1 | HG03927.hp1 | intron_variant | MODIFIER | c.8-1300_8-1291dupGT others(8): Show |
LRTM1 | ENSG00000144771.8 | transcript | ENST00000273286.6 | protein_coding | 1/2 | chr3 | 54926505 | |||||||
chr3:54926505 | TAC | T | 6 | a0001c0001t0001g0008 a0001c0001t0001g0054 a0001c0001t0003g0020 others(3): Show |
17 | HG01261.hp1 HG02071.hp1 HG02080.hp2 others(14): Show |
intron_variant | MODIFIER | c.8-1292_8-1291delGT | LRTM1 | ENSG00000144771.8 | transcript | ENST00000273286.6 | protein_coding | 1/2 | chr3 | 54926505 | |||||||
chr3:54926505 | TACAC | T | 9 | a0001c0001t0001g0007 a0001c0001t0001g0082 a0001c0001t0001g0083 others(6): Show |
21 | HG00280.hp2 HG00673.hp2 HG00738.hp2 others(18): Show |
intron_variant | MODIFIER | c.8-1294_8-1291delGT others(2): Show |
LRTM1 | ENSG00000144771.8 | transcript | ENST00000273286.6 | protein_coding | 1/2 | chr3 | 54926505 | |||||||
chr3:54926505 | TACACAC | T | 36 | a0001c0001t0001g0001 a0001c0001t0001g0016 a0001c0001t0001g0021 others(33): Show |
106 | HG00099.hp2 HG00140.hp1 HG00408.hp2 others(103): Show |
intron_variant | MODIFIER | c.8-1296_8-1291delGT others(4): Show |
LRTM1 | ENSG00000144771.8 | transcript | ENST00000273286.6 | protein_coding | 1/2 | chr3 | 54926505 | |||||||
chr3:54926505 | TACACACA others(1): Show |
T | 16 | a0001c0001t0001g0003 a0001c0001t0001g0061 a0001c0001t0002g0010 others(13): Show |
41 | HG00099.hp1 HG00423.hp1 HG00438.hp1 others(38): Show |
intron_variant | MODIFIER | c.8-1298_8-1291delGT others(6): Show |
LRTM1 | ENSG00000144771.8 | transcript | ENST00000273286.6 | protein_coding | 1/2 | chr3 | 54926505 | |||||||
chr3:54926505 | TACACACA others(3): Show |
T | 30 | a0001c0001t0001g0006 a0001c0001t0001g0058 a0001c0001t0002g0002 others(27): Show |
83 | HG00408.hp1 HG00673.hp1 HG00741.hp1 others(80): Show |
intron_variant | MODIFIER | c.8-1300_8-1291delGT others(8): Show |
LRTM1 | ENSG00000144771.8 | transcript | ENST00000273286.6 | protein_coding | 1/2 | chr3 | 54926505 | |||||||
chr3:54926505 | TACACACA others(5): Show |
T | 4 | a0001c0001t0001g0015 a0001c0001t0002g0022 a0001c0001t0006g0056 others(1): Show |
9 | HG00639.hp1 HG01192.hp1 HG01255.hp2 others(6): Show |
intron_variant | MODIFIER | c.8-1302_8-1291delGT others(10): Show |
LRTM1 | ENSG00000144771.8 | transcript | ENST00000273286.6 | protein_coding | 1/2 | chr3 | 54926505 | |||||||
chr3:54926505 | TACACACA others(7): Show |
T | 9 | a0001c0001t0001g0057 a0001c0001t0002g0104 a0001c0001t0003g0024 others(6): Show |
17 | HG01081.hp1 HG01891.hp1 HG02109.hp2 others(14): Show |
intron_variant | MODIFIER | c.8-1304_8-1291delGT others(12): Show |
LRTM1 | ENSG00000144771.8 | transcript | ENST00000273286.6 | protein_coding | 1/2 | chr3 | 54926505 | |||||||
chr3:54926505 | TACACACA others(11): Show |
T | 1 | a0001c0001t0003g0120 | 1 | NA18955.hp2 | intron_variant | MODIFIER | c.8-1308_8-1291delGT others(16): Show |
LRTM1 | ENSG00000144771.8 | transcript | ENST00000273286.6 | protein_coding | 1/2 | chr3 | 54926505 | |||||||
chr3:54926552 | A | T | 1 | a0001c0001t0003g0119 | 1 | NA18977.hp2 | intron_variant | MODIFIER | c.8-1337T>A | LRTM1 | ENSG00000144771.8 | transcript | ENST00000273286.6 | protein_coding | 1/2 | chr3 | 54926552 | |||||||
chr3:54926564 | A | G | 1 | a0001c0001t0006g0056 | 1 | HG03942.hp1 | intron_variant | MODIFIER | c.7+1341T>C | LRTM1 | ENSG00000144771.8 | transcript | ENST00000273286.6 | protein_coding | 1/2 | chr3 | 54926564 | |||||||
chr3:54926597 | C | T | 1 | a0001c0002t0004g0088 | 1 | HG03516.hp2 | intron_variant | MODIFIER | c.7+1308G>A | LRTM1 | ENSG00000144771.8 | transcript | ENST00000273286.6 | protein_coding | 1/2 | chr3 | 54926597 | |||||||
chr3:54926726 | A | G | 9 | a0001c0001t0002g0017 a0001c0001t0002g0018 a0001c0001t0002g0104 others(6): Show |
20 | HG01081.hp1 HG01106.hp1 HG01167.hp1 others(17): Show |
intron_variant | MODIFIER | c.7+1179T>C | LRTM1 | ENSG00000144771.8 | transcript | ENST00000273286.6 | protein_coding | 1/2 | chr3 | 54926726 | |||||||
chr3:54926887 | G | T | 19 | a0001c0001t0002g0002 a0001c0001t0002g0010 a0001c0001t0002g0022 others(16): Show |
49 | HG00099.hp1 HG00408.hp1 HG00639.hp2 others(46): Show |
intron_variant | MODIFIER | c.7+1018C>A | LRTM1 | ENSG00000144771.8 | transcript | ENST00000273286.6 | protein_coding | 1/2 | chr3 | 54926887 | |||||||
chr3:54926976 | A | G | 1 | a0001c0001t0001g0027 | 2 | HG00558.hp1 NA19087.hp1 |
intron_variant | MODIFIER | c.7+929T>C | LRTM1 | ENSG00000144771.8 | transcript | ENST00000273286.6 | protein_coding | 1/2 | chr3 | 54926976 | |||||||
chr3:54926985 | T | G | 1 | a0001c0001t0001g0085 | 1 | NA19009.hp1 | intron_variant | MODIFIER | c.7+920A>C | LRTM1 | ENSG00000144771.8 | transcript | ENST00000273286.6 | protein_coding | 1/2 | chr3 | 54926985 | |||||||
chr3:54926995 | A | G | 103 | a0001c0001t0001g0001 a0001c0001t0001g0003 a0001c0001t0001g0006 others(100): Show |
275 | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(272): Show |
intron_variant | MODIFIER | c.7+910T>C | LRTM1 | ENSG00000144771.8 | transcript | ENST00000273286.6 | protein_coding | 1/2 | chr3 | 54926995 | |||||||
chr3:54927067 | C | T | 1 | a0001c0001t0001g0054 | 1 | HG04204.hp2 | intron_variant | MODIFIER | c.7+838G>A | LRTM1 | ENSG00000144771.8 | transcript | ENST00000273286.6 | protein_coding | 1/2 | chr3 | 54927067 | |||||||
chr3:54927127 | T | C | 1 | a0001c0001t0010g0094 | 1 | HG02258.hp1 | intron_variant | MODIFIER | c.7+778A>G | LRTM1 | ENSG00000144771.8 | transcript | ENST00000273286.6 | protein_coding | 1/2 | chr3 | 54927127 | |||||||
chr3:54927292 | GTTTAA | G | 1 | a0001c0001t0003g0024 | 3 | HG02109.hp2 HG02258.hp2 NA19043.hp1 |
intron_variant | MODIFIER | c.7+608_7+612delTTAA others(1): Show |
LRTM1 | ENSG00000144771.8 | transcript | ENST00000273286.6 | protein_coding | 1/2 | chr3 | 54927292 | |||||||
chr3:54927356 | G | A | 1 | a0001c0001t0001g0033 | 2 | HG01109.hp2 NA20752.hp2 |
intron_variant | MODIFIER | c.7+549C>T | LRTM1 | ENSG00000144771.8 | transcript | ENST00000273286.6 | protein_coding | 1/2 | chr3 | 54927356 | |||||||
chr3:54927632 | G | A | 1 | a0001c0001t0001g0086 | 1 | NA18994.hp1 | intron_variant | MODIFIER | c.7+273C>T | LRTM1 | ENSG00000144771.8 | transcript | ENST00000273286.6 | protein_coding | 1/2 | chr3 | 54927632 | |||||||
chr3:54927748 | G | A | 1 | a0001c0001t0002g0117 | 1 | HG02895.hp2 | intron_variant | MODIFIER | c.7+157C>T | LRTM1 | ENSG00000144771.8 | transcript | ENST00000273286.6 | protein_coding | 1/2 | chr3 | 54927748 | |||||||
chr3:54927789 | G | T | 1 | a0001c0001t0001g0053 | 1 | NA19066.hp2 | intron_variant | MODIFIER | c.7+116C>A | LRTM1 | ENSG00000144771.8 | transcript | ENST00000273286.6 | protein_coding | 1/2 | chr3 | 54927789 | |||||||
chr3:54927885 | G | A | 1 | a0002c0003t0005g0036 | 2 | HG02895.hp1 HG02897.hp2 |
intron_variant | MODIFIER | c.7+20C>T | LRTM1 | ENSG00000144771.8 | transcript | ENST00000273286.6 | protein_coding | 1/2 | chr3 | 54927885 |