Search by Genic region
Multiple Alignments (by aa haplotype frequency)
Multiple Alignments (by aa haplotype similarity)
| Item | Value |
|---|---|
| geneid | 9500 |
| ensemblid | ENSG00000179222.18 |
| hgncid | 6813 |
| symbol | MAGED1 |
| name | MAGE family member D1 |
| refseq_nuc | NM_006986.4 |
| refseq_prot | NP_008917.3 |
| ensembl_nuc | ENST00000326587.12 |
| ensembl_prot | ENSP00000325333.8 |
| mane_status | MANE Select |
| chr | chrX |
| start | 51893623 |
| end | 51902354 |
| strand | + |
| ver | v1.2 |
| region | chrX:51893623-51902354 |
| region5000 | chrX:51888623-51907354 |
| regionname0 | MAGED1_chrX_51893623_51902354 |
| regionname5000 | MAGED1_chrX_51888623_51907354 |
| ahapid | grch38/chm13v2 | alen | total | AFR | AMR | EAS | EUR | SAS | JPT | regionname | genename | aa | chr | start | end |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| a0001 | 1/1 | 778 | 264 | 76 | 47 | 107 | 11 | 21 | 84 | MAGED1_chrX_51888623_51907354 | MAGED1 | MAQKM others(773): Show |
chrX | 51888623 | 51907354 |
| a0002 | 0/0 | 229 | 1 | 0 | 0 | 1 | 0 | 0 | 1 | MAGED1_chrX_51888623_51907354 | MAGED1 | MAQKM others(224): Show |
chrX | 51888623 | 51907354 |
| achapid | grch38/chm13v2 | alen | clen | total | AFR | AMR | EAS | EUR | SAS | regionname | genename | aseq | cseq | chr | start | end |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| a0001c0001 | 1/0 | 2334 | 237 | 69 | 39 | 100 | 10 | 18 | MAGED1_chrX_51888623_51907354 | MAGED1 | ATGGC others(2329): Show |
chrX | 51888623 | 51907354 | ||
| a0001c0002 | 0/1 | 2334 | 23 | 5 | 8 | 5 | 1 | 3 | MAGED1_chrX_51888623_51907354 | MAGED1 | ATGGC others(2329): Show |
chrX | 51888623 | 51907354 | ||
| a0001c0003 | 0/0 | 2334 | 2 | 0 | 0 | 2 | 0 | 0 | MAGED1_chrX_51888623_51907354 | MAGED1 | ATGGC others(2329): Show |
chrX | 51888623 | 51907354 | ||
| a0001c0004 | 0/0 | 2334 | 1 | 1 | 0 | 0 | 0 | 0 | MAGED1_chrX_51888623_51907354 | MAGED1 | ATGGC others(2329): Show |
chrX | 51888623 | 51907354 | ||
| a0001c0005 | 0/0 | 2334 | 1 | 1 | 0 | 0 | 0 | 0 | MAGED1_chrX_51888623_51907354 | MAGED1 | ATGGC others(2329): Show |
chrX | 51888623 | 51907354 | ||
| a0002c0006 | 0/0 | 2365 | 1 | 0 | 0 | 1 | 0 | 0 | MAGED1_chrX_51888623_51907354 | MAGED1 | ATGGC others(2360): Show |
chrX | 51888623 | 51907354 |
| acthapid | grch38chm13v2 | tlen | total | AFR | AMR | EAS | EUR | SAS | regionname | genename | tseq | chr | start | end |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| a0001c0001t0001 | 1/0 | 2723 | 232 | 64 | 39 | 100 | 10 | 18 | MAGED1_chrX_51888623_51907354 | MAGED1 | AAGCT others(2718): Show |
chrX | 51888623 | 51907354 |
| a0001c0001t0002 | 0/0 | 2723 | 5 | 5 | 0 | 0 | 0 | 0 | MAGED1_chrX_51888623_51907354 | MAGED1 | AAGCT others(2718): Show |
chrX | 51888623 | 51907354 |
| a0001c0002t0001 | 0/1 | 2723 | 23 | 5 | 8 | 5 | 1 | 3 | MAGED1_chrX_51888623_51907354 | MAGED1 | AAGCT others(2718): Show |
chrX | 51888623 | 51907354 |
| a0001c0003t0001 | 0/0 | 2723 | 2 | 0 | 0 | 2 | 0 | 0 | MAGED1_chrX_51888623_51907354 | MAGED1 | AAGCT others(2718): Show |
chrX | 51888623 | 51907354 |
| a0001c0004t0001 | 0/0 | 2723 | 1 | 1 | 0 | 0 | 0 | 0 | MAGED1_chrX_51888623_51907354 | MAGED1 | AAGCT others(2718): Show |
chrX | 51888623 | 51907354 |
| a0001c0005t0001 | 0/0 | 2723 | 1 | 1 | 0 | 0 | 0 | 0 | MAGED1_chrX_51888623_51907354 | MAGED1 | AAGCT others(2718): Show |
chrX | 51888623 | 51907354 |
| a0002c0006t0001 | 0/0 | 2754 | 1 | 0 | 0 | 1 | 0 | 0 | MAGED1_chrX_51888623_51907354 | MAGED1 | AAGCT others(2749): Show |
chrX | 51888623 | 51907354 |
| actghapid | grch38/chm13v2 | total | AFR | AMR | EAS | EUR | SAS | regionname | genename | chr | start | end |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| a0001c0001t0001g0001 | 1/0 | 127 | 20 | 27 | 59 | 6 | 14 | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| a0001c0001t0001g0002 | 0/0 | 31 | 8 | 5 | 15 | 1 | 2 | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| a0001c0001t0001g0003 | 0/0 | 15 | 14 | 1 | 0 | 0 | 0 | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| a0001c0001t0001g0004 | 0/0 | 12 | 0 | 3 | 9 | 0 | 0 | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| a0001c0001t0001g0006 | 0/0 | 6 | 6 | 0 | 0 | 0 | 0 | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| a0001c0001t0001g0007 | 0/0 | 5 | 5 | 0 | 0 | 0 | 0 | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| a0001c0001t0001g0008 | 0/0 | 4 | 0 | 0 | 2 | 0 | 2 | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| a0001c0001t0001g0009 | 0/0 | 3 | 0 | 0 | 2 | 1 | 0 | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| a0001c0001t0001g0010 | 0/0 | 3 | 3 | 0 | 0 | 0 | 0 | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| a0001c0001t0001g0011 | 0/0 | 3 | 0 | 0 | 3 | 0 | 0 | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| a0001c0001t0001g0012 | 0/0 | 2 | 0 | 0 | 2 | 0 | 0 | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| a0001c0001t0001g0013 | 0/0 | 2 | 1 | 1 | 0 | 0 | 0 | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| a0001c0001t0001g0014 | 0/0 | 2 | 2 | 0 | 0 | 0 | 0 | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| a0001c0001t0001g0015 | 0/0 | 2 | 0 | 0 | 2 | 0 | 0 | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| a0001c0001t0001g0016 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| a0001c0001t0001g0019 | 0/0 | 1 | 0 | 0 | 0 | 1 | 0 | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| a0001c0001t0001g0020 | 0/0 | 1 | 0 | 0 | 0 | 1 | 0 | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| a0001c0001t0001g0021 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| a0001c0001t0001g0022 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| a0001c0001t0001g0023 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| a0001c0001t0001g0025 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| a0001c0001t0001g0027 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| a0001c0001t0001g0029 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| a0001c0001t0001g0030 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| a0001c0001t0001g0031 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| a0001c0001t0001g0033 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| a0001c0001t0001g0034 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| a0001c0001t0001g0035 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| a0001c0001t0001g0036 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| a0001c0001t0002g0001 | 0/0 | 5 | 5 | 0 | 0 | 0 | 0 | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| a0001c0002t0001g0001 | 0/0 | 12 | 0 | 6 | 3 | 0 | 3 | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| a0001c0002t0001g0005 | 0/0 | 7 | 5 | 2 | 0 | 0 | 0 | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| a0001c0002t0001g0017 | 0/1 | 1 | 0 | 0 | 0 | 0 | 0 | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| a0001c0002t0001g0024 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| a0001c0002t0001g0028 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| a0001c0002t0001g0032 | 0/0 | 1 | 0 | 0 | 0 | 1 | 0 | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| a0001c0003t0001g0001 | 0/0 | 2 | 0 | 0 | 2 | 0 | 0 | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| a0001c0004t0001g0026 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| a0001c0005t0001g0018 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| a0002c0006t0001g0001 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| sampleid | ID haplotypeid
|
ahapid | chapid | thapid | ghapid | gpopname | popname | regionname | genename | chr | start | end |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| HG00099 | hp1 | a0001 | c0001 | t0001 | g0020 | EUR | GBR | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| HG00099 | hp2 | a0001 | c0001 | t0001 | g0001 | EUR | GBR | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| HG00140 | hp1 | a0001 | c0001 | t0001 | g0001 | EUR | GBR | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| HG00280 | hp1 | a0001 | c0001 | t0001 | g0001 | EUR | FIN | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| HG00323 | hp1 | a0001 | c0001 | t0001 | g0019 | EUR | FIN | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| HG00323 | hp2 | a0001 | c0001 | t0001 | g0009 | EUR | FIN | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| HG00544 | hp1 | a0001 | c0001 | t0001 | g0002 | EAS | CHS | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| HG00544 | hp2 | a0001 | c0001 | t0001 | g0001 | EAS | CHS | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| HG00558 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | CHS | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| HG00558 | hp2 | a0001 | c0001 | t0001 | g0001 | EAS | CHS | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| HG00609 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | CHS | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| HG00621 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | CHS | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| HG00639 | hp1 | a0001 | c0001 | t0001 | g0030 | AMR | PUR | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| HG00639 | hp2 | a0001 | c0001 | t0001 | g0001 | AMR | PUR | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| HG00642 | hp1 | a0001 | c0001 | t0001 | g0001 | AMR | PUR | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| HG00673 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | CHS | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| HG00735 | hp1 | a0001 | c0001 | t0001 | g0001 | AMR | PUR | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| HG00735 | hp2 | a0001 | c0001 | t0001 | g0001 | AMR | PUR | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| HG00738 | hp1 | a0001 | c0001 | t0001 | g0002 | AMR | PUR | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| HG00741 | hp1 | a0001 | c0002 | t0001 | g0001 | AMR | PUR | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| HG00741 | hp2 | a0001 | c0001 | t0001 | g0002 | AMR | PUR | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| HG01069 | hp1 | a0001 | c0001 | t0001 | g0001 | AMR | PUR | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| HG01070 | hp1 | a0001 | c0001 | t0001 | g0001 | AMR | PUR | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| HG01070 | hp2 | a0001 | c0002 | t0001 | g0001 | AMR | PUR | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| HG01071 | hp1 | a0001 | c0001 | t0001 | g0001 | AMR | PUR | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| HG01071 | hp2 | a0001 | c0001 | t0001 | g0001 | AMR | PUR | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| HG01074 | hp1 | a0001 | c0002 | t0001 | g0001 | AMR | PUR | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| HG01099 | hp1 | a0001 | c0002 | t0001 | g0001 | AMR | PUR | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| HG01106 | hp1 | a0001 | c0001 | t0001 | g0001 | AMR | PUR | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| HG01109 | hp1 | a0001 | c0001 | t0001 | g0001 | AMR | PUR | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| HG01167 | hp1 | a0001 | c0001 | t0001 | g0013 | AMR | PUR | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| HG01192 | hp1 | a0001 | c0002 | t0001 | g0001 | AMR | PUR | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| HG01243 | hp1 | a0001 | c0002 | t0001 | g0005 | AMR | PUR | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| HG01255 | hp1 | a0001 | c0002 | t0001 | g0005 | AMR | CLM | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| HG01256 | hp1 | a0001 | c0001 | t0001 | g0001 | AMR | CLM | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| HG01258 | hp1 | a0001 | c0001 | t0001 | g0001 | AMR | CLM | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| HG01261 | hp1 | a0001 | c0001 | t0001 | g0004 | AMR | CLM | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| HG01346 | hp1 | a0001 | c0002 | t0001 | g0001 | AMR | CLM | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| HG01346 | hp2 | a0001 | c0001 | t0001 | g0001 | AMR | CLM | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| HG01358 | hp1 | a0001 | c0001 | t0001 | g0002 | AMR | CLM | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| HG01361 | hp1 | a0001 | c0001 | t0001 | g0001 | AMR | CLM | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| HG01361 | hp2 | a0001 | c0001 | t0001 | g0002 | AMR | CLM | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| HG01433 | hp1 | a0001 | c0001 | t0001 | g0001 | AMR | CLM | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| HG01496 | hp1 | a0001 | c0001 | t0001 | g0001 | AMR | CLM | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| HG01496 | hp2 | a0001 | c0001 | t0001 | g0004 | AMR | CLM | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| HG01515 | hp1 | a0001 | c0001 | t0001 | g0001 | EUR | IBS | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| HG01516 | hp1 | a0001 | c0001 | t0001 | g0001 | EUR | IBS | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| HG01516 | hp2 | a0001 | c0001 | t0001 | g0002 | EUR | IBS | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| HG01884 | hp1 | a0001 | c0001 | t0001 | g0006 | AFR | ACB | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| HG01884 | hp2 | a0001 | c0001 | t0001 | g0003 | AFR | ACB | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| HG01891 | hp1 | a0001 | c0001 | t0001 | g0010 | AFR | ACB | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| HG01891 | hp2 | a0001 | c0002 | t0001 | g0005 | AFR | ACB | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| HG01928 | hp1 | a0001 | c0001 | t0001 | g0001 | AMR | PEL | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| HG01934 | hp1 | a0001 | c0001 | t0001 | g0003 | AMR | PEL | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| HG01943 | hp1 | a0001 | c0001 | t0001 | g0001 | AMR | PEL | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| HG01952 | hp1 | a0001 | c0001 | t0001 | g0001 | AMR | PEL | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| HG01978 | hp1 | a0001 | c0001 | t0001 | g0001 | AMR | PEL | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| HG01978 | hp2 | a0001 | c0001 | t0001 | g0001 | AMR | PEL | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| HG01981 | hp1 | a0001 | c0001 | t0001 | g0004 | AMR | PEL | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| HG01981 | hp2 | a0001 | c0001 | t0001 | g0001 | AMR | PEL | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| HG01993 | hp1 | a0001 | c0001 | t0001 | g0001 | AMR | PEL | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| HG01993 | hp2 | a0001 | c0001 | t0001 | g0001 | AMR | PEL | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| HG02015 | hp1 | a0001 | c0001 | t0001 | g0035 | EAS | KHV | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| HG02027 | hp1 | a0001 | c0001 | t0001 | g0008 | EAS | KHV | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| HG02040 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | KHV | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| HG02055 | hp1 | a0001 | c0001 | t0001 | g0001 | AFR | ACB | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| HG02056 | hp1 | a0001 | c0002 | t0001 | g0028 | EAS | KHV | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| HG02071 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | KHV | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| HG02074 | hp1 | a0001 | c0001 | t0001 | g0002 | EAS | KHV | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| HG02083 | hp1 | a0001 | c0001 | t0001 | g0002 | EAS | KHV | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| HG02129 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | KHV | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| HG02132 | hp1 | a0001 | c0002 | t0001 | g0001 | EAS | KHV | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| HG02135 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | KHV | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| HG02145 | hp1 | a0001 | c0001 | t0001 | g0001 | AFR | ACB | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| HG02165 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | CDX | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| HG02165 | hp2 | a0001 | c0001 | t0001 | g0023 | EAS | CDX | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| HG02257 | hp1 | a0001 | c0001 | t0002 | g0001 | AFR | ACB | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| HG02257 | hp2 | a0001 | c0001 | t0001 | g0036 | AFR | ACB | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| HG02258 | hp1 | a0001 | c0005 | t0001 | g0018 | AFR | ACB | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| HG02273 | hp1 | a0001 | c0001 | t0001 | g0021 | AMR | PEL | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| HG02273 | hp2 | a0001 | c0001 | t0001 | g0001 | AMR | PEL | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| HG02300 | hp1 | a0001 | c0001 | t0001 | g0001 | AMR | PEL | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| HG02451 | hp1 | a0001 | c0001 | t0002 | g0001 | AFR | ACB | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| HG02451 | hp2 | a0001 | c0001 | t0001 | g0001 | AFR | ACB | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| HG02523 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | KHV | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| HG02523 | hp2 | a0001 | c0001 | t0001 | g0001 | EAS | KHV | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| HG02572 | hp1 | a0001 | c0001 | t0001 | g0001 | AFR | GWD | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| HG02602 | hp1 | a0001 | c0001 | t0001 | g0001 | SAS | PJL | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| HG02615 | hp1 | a0001 | c0001 | t0001 | g0003 | AFR | GWD | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| HG02615 | hp2 | a0001 | c0001 | t0001 | g0001 | AFR | GWD | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| HG02622 | hp1 | a0001 | c0001 | t0001 | g0006 | AFR | GWD | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| HG02622 | hp2 | a0001 | c0001 | t0001 | g0001 | AFR | GWD | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| HG02630 | hp1 | a0001 | c0001 | t0001 | g0002 | AFR | GWD | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| HG02630 | hp2 | a0001 | c0001 | t0001 | g0027 | AFR | GWD | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| HG02647 | hp1 | a0001 | c0001 | t0001 | g0007 | AFR | GWD | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| HG02683 | hp1 | a0001 | c0001 | t0001 | g0001 | SAS | PJL | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| HG02683 | hp2 | a0001 | c0002 | t0001 | g0001 | SAS | PJL | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| HG02698 | hp1 | a0001 | c0001 | t0001 | g0001 | SAS | PJL | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| HG02717 | hp1 | a0001 | c0001 | t0001 | g0003 | AFR | GWD | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| HG02735 | hp1 | a0001 | c0001 | t0001 | g0001 | SAS | PJL | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| HG02738 | hp1 | a0001 | c0001 | t0001 | g0008 | SAS | PJL | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| HG02809 | hp1 | a0001 | c0001 | t0001 | g0006 | AFR | GWD | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| HG02809 | hp2 | a0001 | c0001 | t0002 | g0001 | AFR | GWD | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| HG02818 | hp1 | a0001 | c0001 | t0001 | g0002 | AFR | GWD | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| HG02818 | hp2 | a0001 | c0001 | t0001 | g0003 | AFR | GWD | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| HG02886 | hp1 | a0001 | c0001 | t0001 | g0034 | AFR | GWD | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| HG02886 | hp2 | a0001 | c0001 | t0001 | g0001 | AFR | GWD | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| HG02895 | hp1 | a0001 | c0002 | t0001 | g0005 | AFR | GWD | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| HG02896 | hp1 | a0001 | c0001 | t0001 | g0001 | AFR | GWD | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| HG02896 | hp2 | a0001 | c0001 | t0001 | g0003 | AFR | GWD | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| HG02897 | hp1 | a0001 | c0001 | t0001 | g0003 | AFR | GWD | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| HG02897 | hp2 | a0001 | c0002 | t0001 | g0005 | AFR | GWD | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| HG02922 | hp1 | a0001 | c0001 | t0001 | g0001 | AFR | ESN | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| HG02922 | hp2 | a0001 | c0001 | t0001 | g0010 | AFR | ESN | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| HG02965 | hp1 | a0001 | c0001 | t0001 | g0001 | AFR | ESN | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| HG02970 | hp1 | a0001 | c0001 | t0001 | g0003 | AFR | ESN | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| HG02970 | hp2 | a0001 | c0001 | t0001 | g0007 | AFR | ESN | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| HG02976 | hp1 | a0001 | c0001 | t0001 | g0002 | AFR | ESN | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| HG02976 | hp2 | a0001 | c0001 | t0001 | g0014 | AFR | ESN | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| HG03017 | hp1 | a0001 | c0001 | t0001 | g0001 | SAS | PJL | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| HG03041 | hp1 | a0001 | c0001 | t0001 | g0003 | AFR | GWD | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| HG03041 | hp2 | a0001 | c0001 | t0001 | g0006 | AFR | GWD | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| HG03098 | hp1 | a0001 | c0001 | t0001 | g0033 | AFR | MSL | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| HG03130 | hp1 | a0001 | c0001 | t0001 | g0001 | AFR | ESN | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| HG03139 | hp1 | a0001 | c0001 | t0001 | g0003 | AFR | ESN | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| HG03195 | hp1 | a0001 | c0001 | t0001 | g0001 | AFR | ESN | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| HG03195 | hp2 | a0001 | c0001 | t0001 | g0002 | AFR | ESN | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| HG03209 | hp1 | a0001 | c0001 | t0001 | g0003 | AFR | MSL | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| HG03225 | hp1 | a0001 | c0002 | t0001 | g0005 | AFR | MSL | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| HG03453 | hp1 | a0001 | c0001 | t0001 | g0002 | AFR | MSL | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| HG03453 | hp2 | a0001 | c0001 | t0001 | g0003 | AFR | MSL | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| HG03486 | hp1 | a0001 | c0001 | t0001 | g0013 | AFR | MSL | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| HG03486 | hp2 | a0001 | c0001 | t0001 | g0003 | AFR | MSL | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| HG03490 | hp1 | a0001 | c0001 | t0001 | g0001 | SAS | PJL | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| HG03492 | hp1 | a0001 | c0001 | t0001 | g0001 | SAS | PJL | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| HG03516 | hp1 | a0001 | c0001 | t0001 | g0001 | AFR | ESN | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| HG03516 | hp2 | a0001 | c0001 | t0001 | g0010 | AFR | ESN | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| HG03540 | hp1 | a0001 | c0001 | t0001 | g0003 | AFR | GWD | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| HG03540 | hp2 | a0001 | c0001 | t0001 | g0001 | AFR | GWD | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| HG03579 | hp1 | a0001 | c0001 | t0001 | g0007 | AFR | MSL | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| HG03654 | hp1 | a0001 | c0002 | t0001 | g0001 | SAS | PJL | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| HG03688 | hp1 | a0001 | c0001 | t0001 | g0001 | SAS | STU | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| HG03704 | hp1 | a0001 | c0001 | t0001 | g0002 | SAS | PJL | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| HG03704 | hp2 | a0001 | c0001 | t0001 | g0001 | SAS | PJL | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| HG03710 | hp1 | a0001 | c0001 | t0001 | g0008 | SAS | PJL | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| HG03831 | hp1 | a0001 | c0001 | t0001 | g0001 | SAS | BEB | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| HG03831 | hp2 | a0001 | c0002 | t0001 | g0001 | SAS | BEB | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| HG03942 | hp1 | a0001 | c0001 | t0001 | g0001 | SAS | BEB | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| HG04199 | hp1 | a0001 | c0001 | t0001 | g0001 | SAS | STU | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| HG04204 | hp1 | a0001 | c0001 | t0001 | g0001 | SAS | STU | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| HG04228 | hp1 | a0001 | c0001 | t0001 | g0002 | SAS | STU | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| NA18522 | hp1 | a0001 | c0001 | t0001 | g0007 | AFR | YRI | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| NA18612 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | CHB | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| NA18747 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | CHB | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| NA18906 | hp1 | a0001 | c0001 | t0001 | g0014 | AFR | YRI | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| NA18906 | hp2 | a0001 | c0001 | t0001 | g0001 | AFR | YRI | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| NA18940 | hp1 | a0001 | c0002 | t0001 | g0001 | EAS | JPT | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| NA18943 | hp1 | a0001 | c0001 | t0001 | g0022 | EAS | JPT | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| NA18944 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| NA18945 | hp1 | a0001 | c0001 | t0001 | g0002 | EAS | JPT | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| NA18946 | hp1 | a0001 | c0001 | t0001 | g0015 | EAS | JPT | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| NA18946 | hp2 | a0001 | c0001 | t0001 | g0004 | EAS | JPT | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| NA18948 | hp1 | a0001 | c0001 | t0001 | g0009 | EAS | JPT | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| NA18951 | hp1 | a0001 | c0002 | t0001 | g0001 | EAS | JPT | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| NA18951 | hp2 | a0001 | c0001 | t0001 | g0004 | EAS | JPT | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| NA18952 | hp1 | a0001 | c0001 | t0001 | g0004 | EAS | JPT | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| NA18953 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| NA18954 | hp1 | a0001 | c0001 | t0001 | g0011 | EAS | JPT | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| NA18954 | hp2 | a0001 | c0001 | t0001 | g0002 | EAS | JPT | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| NA18959 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| NA18960 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| NA18961 | hp1 | a0001 | c0001 | t0001 | g0002 | EAS | JPT | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| NA18962 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| NA18963 | hp1 | a0001 | c0001 | t0001 | g0002 | EAS | JPT | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| NA18963 | hp2 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| NA18965 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| NA18966 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| NA18967 | hp1 | a0001 | c0001 | t0001 | g0011 | EAS | JPT | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| NA18969 | hp1 | a0001 | c0001 | t0001 | g0002 | EAS | JPT | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| NA18969 | hp2 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| NA18970 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| NA18971 | hp1 | a0001 | c0001 | t0001 | g0011 | EAS | JPT | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| NA18975 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| NA18975 | hp2 | a0001 | c0001 | t0001 | g0031 | EAS | JPT | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| NA18977 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| NA18978 | hp1 | a0001 | c0001 | t0001 | g0004 | EAS | JPT | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| NA18978 | hp2 | a0001 | c0001 | t0001 | g0002 | EAS | JPT | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| NA18980 | hp1 | a0001 | c0001 | t0001 | g0002 | EAS | JPT | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| NA18980 | hp2 | a0001 | c0001 | t0001 | g0009 | EAS | JPT | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| NA18982 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| NA18983 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| NA18984 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| NA18985 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| NA18986 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| NA18987 | hp1 | a0001 | c0001 | t0001 | g0025 | EAS | JPT | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| NA18987 | hp2 | a0001 | c0001 | t0001 | g0012 | EAS | JPT | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| NA18988 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| NA18989 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| NA18990 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| NA18991 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| NA18991 | hp2 | a0001 | c0001 | t0001 | g0002 | EAS | JPT | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| NA18994 | hp1 | a0001 | c0001 | t0001 | g0029 | EAS | JPT | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| NA18995 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| NA19000 | hp1 | a0001 | c0003 | t0001 | g0001 | EAS | JPT | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| NA19004 | hp1 | a0001 | c0001 | t0001 | g0015 | EAS | JPT | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| NA19005 | hp1 | a0001 | c0001 | t0001 | g0002 | EAS | JPT | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| NA19006 | hp1 | a0001 | c0001 | t0001 | g0002 | EAS | JPT | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| NA19007 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| NA19009 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| NA19010 | hp1 | a0001 | c0001 | t0001 | g0004 | EAS | JPT | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| NA19010 | hp2 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| NA19011 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| NA19011 | hp2 | a0001 | c0001 | t0001 | g0002 | EAS | JPT | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| NA19012 | hp1 | a0001 | c0001 | t0001 | g0008 | EAS | JPT | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| NA19030 | hp1 | a0001 | c0001 | t0001 | g0006 | AFR | LWK | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| NA19030 | hp2 | a0001 | c0001 | t0001 | g0001 | AFR | LWK | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| NA19043 | hp1 | a0001 | c0001 | t0001 | g0007 | AFR | LWK | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| NA19055 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| NA19056 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| NA19058 | hp1 | a0001 | c0002 | t0001 | g0024 | EAS | JPT | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| NA19060 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| NA19062 | hp1 | a0001 | c0001 | t0001 | g0004 | EAS | JPT | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| NA19063 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| NA19064 | hp1 | a0001 | c0001 | t0001 | g0004 | EAS | JPT | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| NA19064 | hp2 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| NA19065 | hp1 | a0002 | c0006 | t0001 | g0001 | EAS | JPT | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| NA19065 | hp2 | a0001 | c0001 | t0001 | g0004 | EAS | JPT | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| NA19066 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| NA19067 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| NA19068 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| NA19070 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| NA19075 | hp1 | a0001 | c0001 | t0001 | g0002 | EAS | JPT | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| NA19076 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| NA19079 | hp1 | a0001 | c0001 | t0001 | g0004 | EAS | JPT | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| NA19081 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| NA19081 | hp2 | a0001 | c0001 | t0001 | g0012 | EAS | JPT | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| NA19082 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| NA19083 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| NA19085 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| NA19086 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| NA19088 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| NA19089 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| NA19091 | hp1 | a0001 | c0003 | t0001 | g0001 | EAS | JPT | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| NA19240 | hp1 | a0001 | c0001 | t0002 | g0001 | AFR | YRI | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| NA19240 | hp2 | a0001 | c0001 | t0001 | g0001 | AFR | YRI | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| NA20129 | hp1 | a0001 | c0001 | t0001 | g0016 | AFR | ASW | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| NA20129 | hp2 | a0001 | c0001 | t0001 | g0002 | AFR | ASW | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| NA20752 | hp1 | a0001 | c0001 | t0001 | g0001 | EUR | TSI | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| NA20805 | hp1 | a0001 | c0002 | t0001 | g0032 | EUR | TSI | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| NA20905 | hp1 | a0001 | c0001 | t0001 | g0001 | SAS | GIH | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| HG01123 | hp1 | a0001 | c0001 | t0001 | g0002 | AMR | CLM | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| HG01123 | hp2 | a0001 | c0001 | t0001 | g0001 | AMR | CLM | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| HG02109 | hp1 | a0001 | c0002 | t0001 | g0005 | AFR | ACB | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| HG02109 | hp2 | a0001 | c0001 | t0001 | g0001 | AFR | ACB | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| HG02486 | hp1 | a0001 | c0001 | t0001 | g0006 | AFR | ACB | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| HG02559 | hp1 | a0001 | c0001 | t0001 | g0002 | AFR | ACB | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| HG02559 | hp2 | a0001 | c0001 | t0001 | g0003 | AFR | ACB | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| HG03471 | hp1 | a0001 | c0004 | t0001 | g0026 | AFR | MSL | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| HG06807 | hp1 | a0001 | c0001 | t0001 | g0001 | AFR | USA | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| HG06807 | hp2 | a0001 | c0001 | t0002 | g0001 | AFR | USA | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| NA18955 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| NA21309 | hp1 | a0001 | c0001 | t0001 | g0001 | AFR | LWK | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| NA21309 | hp2 | a0001 | c0001 | t0001 | g0002 | AFR | LWK | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| homoSapiens | chm13v2 | a0001 | c0002 | t0001 | g0017 | REF | REF | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| homoSapiens | grch38p0 | a0001 | c0001 | t0001 | g0001 | REF | REF | MAGED1_chrX_51888623_51907354 | MAGED1 | chrX | 51888623 | 51907354 |
| view | chr:pos | ref | alt | # # of ahapid:amino-acid(protein) level |
ahapids | # # of haplotypeids |
haplotypeids | annotation | impact | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length |
cds cds pos length |
aa aa pos length |
distance | status | chr | pos |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| chrX:51895601 | G | T | 1 | a0002 | 1 | NA19065.hp1 | missense_variant | MODERATE | c.594G>T | p.Gln198His | MAGED1 | ENSG00000179222.18 | transcript | ENST00000326587.12 | protein_coding | 3/13 | 763/2723 | 594/2337 | 198/778 | chrX | 51895601 | |||
| chrX:51895604 | T | G | 1 | a0002 | 1 | NA19065.hp1 | missense_variant | MODERATE | c.597T>G | p.Asn199Lys | MAGED1 | ENSG00000179222.18 | transcript | ENST00000326587.12 | protein_coding | 3/13 | 766/2723 | 597/2337 | 199/778 | chrX | 51895604 | |||
| chrX:51895605 | G | C | 1 | a0002 | 1 | NA19065.hp1 | missense_variant | MODERATE | c.598G>C | p.Val200Leu | MAGED1 | ENSG00000179222.18 | transcript | ENST00000326587.12 | protein_coding | 3/13 | 767/2723 | 598/2337 | 200/778 | chrX | 51895605 | |||
| chrX:51895606 | T | C | 1 | a0002 | 1 | NA19065.hp1 | missense_variant | MODERATE | c.599T>C | p.Val200Ala | MAGED1 | ENSG00000179222.18 | transcript | ENST00000326587.12 | protein_coding | 3/13 | 768/2723 | 599/2337 | 200/778 | chrX | 51895606 | |||
| chrX:51895609 | A | T | 1 | a0002 | 1 | NA19065.hp1 | missense_variant | MODERATE | c.602A>T | p.Asn201Ile | MAGED1 | ENSG00000179222.18 | transcript | ENST00000326587.12 | protein_coding | 3/13 | 771/2723 | 602/2337 | 201/778 | chrX | 51895609 | |||
| chrX:51895612 | A | T | 1 | a0002 | 1 | NA19065.hp1 | missense_variant | MODERATE | c.605A>T | p.Gln202Leu | MAGED1 | ENSG00000179222.18 | transcript | ENST00000326587.12 | protein_coding | 3/13 | 774/2723 | 605/2337 | 202/778 | chrX | 51895612 | |||
| chrX:51895614 | G | A | 1 | a0002 | 1 | NA19065.hp1 | missense_variant | MODERATE | c.607G>A | p.Ala203Thr | MAGED1 | ENSG00000179222.18 | transcript | ENST00000326587.12 | protein_coding | 3/13 | 776/2723 | 607/2337 | 203/778 | chrX | 51895614 | |||
| chrX:51895615 | C | T | 1 | a0002 | 1 | NA19065.hp1 | missense_variant | MODERATE | c.608C>T | p.Ala203Val | MAGED1 | ENSG00000179222.18 | transcript | ENST00000326587.12 | protein_coding | 3/13 | 777/2723 | 608/2337 | 203/778 | chrX | 51895615 | |||
| chrX:51895617 | A | C | 1 | a0002 | 1 | NA19065.hp1 | missense_variant | MODERATE | c.610A>C | p.Lys204Gln | MAGED1 | ENSG00000179222.18 | transcript | ENST00000326587.12 | protein_coding | 3/13 | 779/2723 | 610/2337 | 204/778 | chrX | 51895617 | |||
| chrX:51895618 | A | T | 1 | a0002 | 1 | NA19065.hp1 | missense_variant | MODERATE | c.611A>T | p.Lys204Ile | MAGED1 | ENSG00000179222.18 | transcript | ENST00000326587.12 | protein_coding | 3/13 | 780/2723 | 611/2337 | 204/778 | chrX | 51895618 | |||
| chrX:51895621 | T | G | 1 | a0002 | 1 | NA19065.hp1 | missense_variant | MODERATE | c.614T>G | p.Met205Arg | MAGED1 | ENSG00000179222.18 | transcript | ENST00000326587.12 | protein_coding | 3/13 | 783/2723 | 614/2337 | 205/778 | chrX | 51895621 | |||
| chrX:51895622 | G | A | 1 | a0002 | 1 | NA19065.hp1 | missense_variant | MODERATE | c.615G>A | p.Met205Ile | MAGED1 | ENSG00000179222.18 | transcript | ENST00000326587.12 | protein_coding | 3/13 | 784/2723 | 615/2337 | 205/778 | chrX | 51895622 | |||
| chrX:51895632 | C | A | 1 | a0002 | 1 | NA19065.hp1 | missense_variant | MODERATE | c.625C>A | p.Gln209Lys | MAGED1 | ENSG00000179222.18 | transcript | ENST00000326587.12 | protein_coding | 3/13 | 794/2723 | 625/2337 | 209/778 | chrX | 51895632 | |||
| chrX:51895639 | A | C | 1 | a0002 | 1 | NA19065.hp1 | missense_variant | MODERATE | c.632A>C | p.Asp211Ala | MAGED1 | ENSG00000179222.18 | transcript | ENST00000326587.12 | protein_coding | 3/13 | 801/2723 | 632/2337 | 211/778 | chrX | 51895639 | |||
| chrX:51895643 | A | G | 1 | a0002 | 1 | NA19065.hp1 | missense_variant | MODERATE | c.636A>G | p.Ile212Met | MAGED1 | ENSG00000179222.18 | transcript | ENST00000326587.12 | protein_coding | 3/13 | 805/2723 | 636/2337 | 212/778 | chrX | 51895643 | |||
| chrX:51895649 | C | CAGGAATA others(24): Show |
1 | a0002 | 1 | NA19065.hp1 | frameshift_variant | HIGH | c.642_643insAGGAATAG others(23): Show |
p.Asp215fs | MAGED1 | ENSG00000179222.18 | transcript | ENST00000326587.12 | protein_coding | 3/13 | 812/2723 | 643/2337 | 215/778 | chrX | 51895649 |
| view | chr:pos | ref | alt | # # of chapid |
chapids | # # of haplotypeids |
haplotypeids | annotation | impact | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length |
cds cds pos length |
aa aa pos length |
distance | status | chr | pos |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| chrX:51895451 | C | T | 1 | a0001c0003 | 2 | NA19000.hp1 NA19091.hp1 |
synonymous_variant | LOW | c.444C>T | p.Ala148Ala | MAGED1 | ENSG00000179222.18 | transcript | ENST00000326587.12 | protein_coding | 3/13 | 613/2723 | 444/2337 | 148/778 | chrX | 51895451 | |||
| chrX:51895607 | A | G | 1 | a0002c0006 | 1 | NA19065.hp1 | synonymous_variant | LOW | c.600A>G | p.Val200Val | MAGED1 | ENSG00000179222.18 | transcript | ENST00000326587.12 | protein_coding | 3/13 | 769/2723 | 600/2337 | 200/778 | chrX | 51895607 | |||
| chrX:51895613 | G | A | 1 | a0002c0006 | 1 | NA19065.hp1 | synonymous_variant | LOW | c.606G>A | p.Gln202Gln | MAGED1 | ENSG00000179222.18 | transcript | ENST00000326587.12 | protein_coding | 3/13 | 775/2723 | 606/2337 | 202/778 | chrX | 51895613 | |||
| chrX:51895658 | T | G | 1 | a0002c0006 | 1 | NA19065.hp1 | synonymous_variant | LOW | c.651T>G | p.Gly217Gly | MAGED1 | ENSG00000179222.18 | transcript | ENST00000326587.12 | protein_coding | 3/13 | 820/2723 | 651/2337 | 217/778 | chrX | 51895658 | |||
| chrX:51901618 | T | C | 2 | a0001c0004 a0001c0005 |
2 | HG02258.hp1 HG03471.hp1 |
synonymous_variant | LOW | c.2025T>C | p.Asp675Asp | MAGED1 | ENSG00000179222.18 | transcript | ENST00000326587.12 | protein_coding | 12/13 | 2194/2723 | 2025/2337 | 675/778 | chrX | 51901618 | |||
| chrX:51901652 | C | A | 1 | a0001c0002 | 22 | HG00741.hp1 HG01070.hp2 HG01074.hp1 others(19): Show |
synonymous_variant | LOW | c.2059C>A | p.Arg687Arg | MAGED1 | ENSG00000179222.18 | transcript | ENST00000326587.12 | protein_coding | 12/13 | 2228/2723 | 2059/2337 | 687/778 | chrX | 51901652 | |||
| chrX:51901900 | T | C | 1 | a0001c0004 | 1 | HG03471.hp1 | synonymous_variant | LOW | c.2307T>C | p.Phe769Phe | MAGED1 | ENSG00000179222.18 | transcript | ENST00000326587.12 | protein_coding | 12/13 | 2476/2723 | 2307/2337 | 769/778 | chrX | 51901900 |
| view | chr:pos | ref | alt | # # of thapid:transcript level |
thapids | # # of haplotypeids |
haplotypeids | annotation | impact | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length |
cds cds pos length |
aa aa pos length |
distance | status | chr | pos |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| chrX:51902160 | C | T | 1 | a0001c0001t0002 | 5 | HG02257.hp1 HG02451.hp1 HG02809.hp2 others(2): Show |
3_prime_UTR_variant | MODIFIER | c.*23C>T | MAGED1 | ENSG00000179222.18 | transcript | ENST00000326587.12 | protein_coding | 13/13 | 230 | chrX | 51902160 |
| view | chr:pos | ref | alt | # # of ghapid:genebody level |
ghapids | # # of haplotypeids |
haplotypeids | annotation | impact | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | genebody_biotype | rank | cdna cdna pos length |
cds cds pos length |
aa aa pos length |
distance | status | chr | pos |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| chrX:51894020 | A | G | 1 | a0001c0001t0001g0036 | 1 | HG02257.hp2 | intron_variant | MODIFIER | c.-36-249A>G | MAGED1 | ENSG00000179222.18 | transcript | ENST00000326587.12 | protein_coding | 1/12 | chrX | 51894020 | |||||||
| chrX:51894026 | C | T | 3 | a0001c0001t0001g0004 a0001c0001t0001g0011 a0001c0001t0001g0035 |
16 | HG01261.hp1 HG01496.hp2 HG01981.hp1 others(13): Show |
intron_variant | MODIFIER | c.-36-243C>T | MAGED1 | ENSG00000179222.18 | transcript | ENST00000326587.12 | protein_coding | 1/12 | chrX | 51894026 | |||||||
| chrX:51894206 | C | A | 1 | a0001c0001t0001g0007 | 5 | HG02647.hp1 HG02970.hp2 HG03579.hp1 others(2): Show |
intron_variant | MODIFIER | c.-36-63C>A | MAGED1 | ENSG00000179222.18 | transcript | ENST00000326587.12 | protein_coding | 1/12 | chrX | 51894206 | |||||||
| chrX:51894375 | C | T | 7 | a0001c0001t0001g0002 a0001c0001t0001g0015 a0001c0001t0001g0030 others(4): Show |
38 | HG00544.hp1 HG00639.hp1 HG00738.hp1 others(35): Show |
intron_variant | MODIFIER | c.45+26C>T | MAGED1 | ENSG00000179222.18 | transcript | ENST00000326587.12 | protein_coding | 2/12 | chrX | 51894375 | |||||||
| chrX:51894455 | G | A | 8 | a0001c0001t0001g0002 a0001c0001t0001g0015 a0001c0001t0001g0016 others(5): Show |
39 | HG00544.hp1 HG00639.hp1 HG00738.hp1 others(36): Show |
intron_variant | MODIFIER | c.45+106G>A | MAGED1 | ENSG00000179222.18 | transcript | ENST00000326587.12 | protein_coding | 2/12 | chrX | 51894455 | |||||||
| chrX:51894609 | A | AT | 3 | a0001c0001t0001g0008 a0001c0001t0001g0029 a0001c0002t0001g0028 |
6 | HG02027.hp1 HG02056.hp1 HG02738.hp1 others(3): Show |
intron_variant | MODIFIER | c.45+273dupT | MAGED1 | ENSG00000179222.18 | transcript | ENST00000326587.12 | protein_coding | 2/12 | INFO_REALIGN_3_PRIME | chrX | 51894609 | ||||||
| chrX:51894750 | G | A | 1 | a0001c0005t0001g0018 | 1 | HG02258.hp1 | intron_variant | MODIFIER | c.46-303G>A | MAGED1 | ENSG00000179222.18 | transcript | ENST00000326587.12 | protein_coding | 2/12 | chrX | 51894750 | |||||||
| chrX:51894976 | A | T | 1 | a0001c0001t0001g0035 | 1 | HG02015.hp1 | intron_variant | MODIFIER | c.46-77A>T | MAGED1 | ENSG00000179222.18 | transcript | ENST00000326587.12 | protein_coding | 2/12 | chrX | 51894976 | |||||||
| chrX:51895804 | T | G | 1 | a0001c0001t0001g0019 | 1 | HG00323.hp1 | intron_variant | MODIFIER | c.753+44T>G | MAGED1 | ENSG00000179222.18 | transcript | ENST00000326587.12 | protein_coding | 3/12 | chrX | 51895804 | |||||||
| chrX:51895887 | A | G | 1 | a0001c0001t0001g0014 | 2 | HG02976.hp2 NA18906.hp1 |
intron_variant | MODIFIER | c.753+127A>G | MAGED1 | ENSG00000179222.18 | transcript | ENST00000326587.12 | protein_coding | 3/12 | chrX | 51895887 | |||||||
| chrX:51895942 | C | T | 2 | a0001c0001t0001g0027 a0001c0001t0001g0034 |
2 | HG02630.hp2 HG02886.hp1 |
intron_variant | MODIFIER | c.753+182C>T | MAGED1 | ENSG00000179222.18 | transcript | ENST00000326587.12 | protein_coding | 3/12 | chrX | 51895942 | |||||||
| chrX:51896239 | A | G | 1 | a0001c0004t0001g0026 | 1 | HG03471.hp1 | intron_variant | MODIFIER | c.754-170A>G | MAGED1 | ENSG00000179222.18 | transcript | ENST00000326587.12 | protein_coding | 3/12 | chrX | 51896239 | |||||||
| chrX:51896259 | A | G | 1 | a0001c0002t0001g0005 | 7 | HG01243.hp1 HG01255.hp1 HG01891.hp2 others(4): Show |
intron_variant | MODIFIER | c.754-150A>G | MAGED1 | ENSG00000179222.18 | transcript | ENST00000326587.12 | protein_coding | 3/12 | chrX | 51896259 | |||||||
| chrX:51897120 | C | G | 1 | a0001c0001t0001g0006 | 6 | HG01884.hp1 HG02486.hp1 HG02622.hp1 others(3): Show |
intron_variant | MODIFIER | c.1422+43C>G | MAGED1 | ENSG00000179222.18 | transcript | ENST00000326587.12 | protein_coding | 4/12 | chrX | 51897120 | |||||||
| chrX:51897151 | A | G | 1 | a0001c0001t0001g0025 | 1 | NA18987.hp1 | intron_variant | MODIFIER | c.1423-57A>G | MAGED1 | ENSG00000179222.18 | transcript | ENST00000326587.12 | protein_coding | 4/12 | chrX | 51897151 | |||||||
| chrX:51897177 | T | A | 1 | a0001c0001t0001g0030 | 1 | HG00639.hp1 | intron_variant | MODIFIER | c.1423-31T>A | MAGED1 | ENSG00000179222.18 | transcript | ENST00000326587.12 | protein_coding | 4/12 | chrX | 51897177 | |||||||
| chrX:51897446 | C | G | 1 | a0001c0001t0001g0013 | 2 | HG01167.hp1 HG03486.hp1 |
intron_variant | MODIFIER | c.1487-101C>G | MAGED1 | ENSG00000179222.18 | transcript | ENST00000326587.12 | protein_coding | 5/12 | chrX | 51897446 | |||||||
| chrX:51897480 | G | T | 1 | a0001c0001t0001g0011 | 3 | NA18954.hp1 NA18967.hp1 NA18971.hp1 |
intron_variant | MODIFIER | c.1487-67G>T | MAGED1 | ENSG00000179222.18 | transcript | ENST00000326587.12 | protein_coding | 5/12 | chrX | 51897480 | |||||||
| chrX:51898033 | T | A | 1 | a0001c0001t0001g0007 | 5 | HG02647.hp1 HG02970.hp2 HG03579.hp1 others(2): Show |
intron_variant | MODIFIER | c.1659-81T>A | MAGED1 | ENSG00000179222.18 | transcript | ENST00000326587.12 | protein_coding | 7/12 | chrX | 51898033 | |||||||
| chrX:51898070 | A | C | 1 | a0001c0002t0001g0024 | 1 | NA19058.hp1 | intron_variant | MODIFIER | c.1659-44A>C | MAGED1 | ENSG00000179222.18 | transcript | ENST00000326587.12 | protein_coding | 7/12 | chrX | 51898070 | |||||||
| chrX:51898101 | T | C | 1 | a0001c0002t0001g0028 | 1 | HG02056.hp1 | intron_variant | MODIFIER | c.1659-13T>C | MAGED1 | ENSG00000179222.18 | transcript | ENST00000326587.12 | protein_coding | 7/12 | chrX | 51898101 | |||||||
| chrX:51898511 | C | T | 7 | a0001c0001t0001g0002 a0001c0001t0001g0015 a0001c0001t0001g0016 others(4): Show |
38 | HG00544.hp1 HG00639.hp1 HG00738.hp1 others(35): Show |
intron_variant | MODIFIER | c.1782-70C>T | MAGED1 | ENSG00000179222.18 | transcript | ENST00000326587.12 | protein_coding | 9/12 | chrX | 51898511 | |||||||
| chrX:51898782 | C | T | 1 | a0001c0001t0001g0033 | 1 | HG03098.hp1 | intron_variant | MODIFIER | c.1844+139C>T | MAGED1 | ENSG00000179222.18 | transcript | ENST00000326587.12 | protein_coding | 10/12 | chrX | 51898782 | |||||||
| chrX:51899273 | A | G | 1 | a0001c0001t0001g0015 | 2 | NA18946.hp1 NA19004.hp1 |
intron_variant | MODIFIER | c.1844+630A>G | MAGED1 | ENSG00000179222.18 | transcript | ENST00000326587.12 | protein_coding | 10/12 | chrX | 51899273 | |||||||
| chrX:51899331 | C | T | 1 | a0001c0001t0001g0007 | 5 | HG02647.hp1 HG02970.hp2 HG03579.hp1 others(2): Show |
intron_variant | MODIFIER | c.1844+688C>T | MAGED1 | ENSG00000179222.18 | transcript | ENST00000326587.12 | protein_coding | 10/12 | chrX | 51899331 | |||||||
| chrX:51899418 | C | T | 1 | a0001c0001t0001g0010 | 3 | HG01891.hp1 HG02922.hp2 HG03516.hp2 |
intron_variant | MODIFIER | c.1845-764C>T | MAGED1 | ENSG00000179222.18 | transcript | ENST00000326587.12 | protein_coding | 10/12 | chrX | 51899418 | |||||||
| chrX:51899598 | G | A | 1 | a0001c0001t0001g0031 | 1 | NA18975.hp2 | intron_variant | MODIFIER | c.1845-584G>A | MAGED1 | ENSG00000179222.18 | transcript | ENST00000326587.12 | protein_coding | 10/12 | chrX | 51899598 | |||||||
| chrX:51899733 | C | A | 1 | a0001c0001t0001g0020 | 1 | HG00099.hp1 | intron_variant | MODIFIER | c.1845-449C>A | MAGED1 | ENSG00000179222.18 | transcript | ENST00000326587.12 | protein_coding | 10/12 | chrX | 51899733 | |||||||
| chrX:51899871 | A | G | 1 | a0001c0001t0001g0023 | 1 | HG02165.hp2 | intron_variant | MODIFIER | c.1845-311A>G | MAGED1 | ENSG00000179222.18 | transcript | ENST00000326587.12 | protein_coding | 10/12 | chrX | 51899871 | |||||||
| chrX:51900072 | C | A | 1 | a0001c0001t0001g0021 | 1 | HG02273.hp1 | intron_variant | MODIFIER | c.1845-110C>A | MAGED1 | ENSG00000179222.18 | transcript | ENST00000326587.12 | protein_coding | 10/12 | chrX | 51900072 | |||||||
| chrX:51900590 | G | GT | 3 | a0001c0001t0001g0003 a0001c0001t0001g0010 a0001c0001t0001g0014 |
20 | HG01884.hp2 HG01891.hp1 HG01934.hp1 others(17): Show |
intron_variant | MODIFIER | c.1959+295dupT | MAGED1 | ENSG00000179222.18 | transcript | ENST00000326587.12 | protein_coding | 11/12 | INFO_REALIGN_3_PRIME | chrX | 51900590 | ||||||
| chrX:51900720 | C | G | 1 | a0001c0005t0001g0018 | 1 | HG02258.hp1 | intron_variant | MODIFIER | c.1959+424C>G | MAGED1 | ENSG00000179222.18 | transcript | ENST00000326587.12 | protein_coding | 11/12 | chrX | 51900720 | |||||||
| chrX:51901415 | A | G | 1 | a0001c0001t0001g0022 | 1 | NA18943.hp1 | intron_variant | MODIFIER | c.1960-138A>G | MAGED1 | ENSG00000179222.18 | transcript | ENST00000326587.12 | protein_coding | 11/12 | chrX | 51901415 | |||||||
| chrX:51901969 | G | C | 6 | a0001c0001t0001g0002 a0001c0001t0001g0012 a0001c0001t0001g0015 others(3): Show |
38 | HG00544.hp1 HG00639.hp1 HG00738.hp1 others(35): Show |
intron_variant | MODIFIER | c.*8+31G>C | MAGED1 | ENSG00000179222.18 | transcript | ENST00000326587.12 | protein_coding | 12/12 | chrX | 51901969 | |||||||
| chrX:51902114 | AT | A | 2 | a0001c0001t0001g0009 a0001c0001t0001g0029 |
4 | HG00323.hp2 NA18948.hp1 NA18980.hp2 others(1): Show |
intron_variant | MODIFIER | c.*9-25delT | MAGED1 | ENSG00000179222.18 | transcript | ENST00000326587.12 | protein_coding | 12/12 | INFO_REALIGN_3_PRIME | chrX | 51902114 |