Search by Genic region
Multiple Alignments (by aa haplotype frequency)
Multiple Alignments (by aa haplotype similarity)
| Item | Value |
|---|---|
| geneid | 10916 |
| ensemblid | ENSG00000102316.17 |
| hgncid | 16353 |
| symbol | MAGED2 |
| name | MAGE family member D2 |
| refseq_nuc | NM_177433.3 |
| refseq_prot | NP_803182.1 |
| ensembl_nuc | ENST00000375068.6 |
| ensembl_prot | ENSP00000364209.1 |
| mane_status | MANE Select |
| chr | chrX |
| start | 54807745 |
| end | 54816015 |
| strand | + |
| ver | v1.2 |
| region | chrX:54807745-54816015 |
| region5000 | chrX:54802745-54821015 |
| regionname0 | MAGED2_chrX_54807745_54816015 |
| regionname5000 | MAGED2_chrX_54802745_54821015 |
| ahapid | grch38/chm13v2 | alen | total | AFR | AMR | EAS | EUR | SAS | JPT | regionname | genename | aa | chr | start | end |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| a0001 | 0/0 | 606 | 303 | 71 | 59 | 132 | 11 | 30 | 103 | MAGED2_chrX_54802745_54821015 | MAGED2 | MSDTS others(601): Show |
chrX | 54802745 | 54821015 |
| a0002 | 0/0 | 606 | 7 | 7 | 0 | 0 | 0 | 0 | 0 | MAGED2_chrX_54802745_54821015 | MAGED2 | MSDTS others(601): Show |
chrX | 54802745 | 54821015 |
| a0003 | 0/0 | 606 | 3 | 0 | 0 | 3 | 0 | 0 | 3 | MAGED2_chrX_54802745_54821015 | MAGED2 | MSDTS others(601): Show |
chrX | 54802745 | 54821015 |
| a0004 | 0/0 | 453 | 1 | 0 | 1 | 0 | 0 | 0 | 0 | MAGED2_chrX_54802745_54821015 | MAGED2 | MSDTS others(448): Show |
chrX | 54802745 | 54821015 |
| a0005 | 0/0 | 487 | 1 | 0 | 0 | 1 | 0 | 0 | 1 | MAGED2_chrX_54802745_54821015 | MAGED2 | MSDTS others(482): Show |
chrX | 54802745 | 54821015 |
| a0006 | 0/0 | 574 | 1 | 0 | 0 | 1 | 0 | 0 | 1 | MAGED2_chrX_54802745_54821015 | MAGED2 | MSDTS others(569): Show |
chrX | 54802745 | 54821015 |
| a0007 | 0/0 | 606 | 1 | 0 | 0 | 1 | 0 | 0 | 1 | MAGED2_chrX_54802745_54821015 | MAGED2 | MSDTS others(601): Show |
chrX | 54802745 | 54821015 |
| achapid | grch38/chm13v2 | alen | clen | total | AFR | AMR | EAS | EUR | SAS | regionname | genename | aseq | cseq | chr | start | end |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| a0001c0001 | 0/0 | 1818 | 148 | 26 | 18 | 83 | 5 | 16 | MAGED2_chrX_54802745_54821015 | MAGED2 | ATGTC others(1813): Show |
chrX | 54802745 | 54821015 | ||
| a0001c0002 | 0/0 | 1818 | 123 | 23 | 31 | 49 | 6 | 14 | MAGED2_chrX_54802745_54821015 | MAGED2 | ATGTC others(1813): Show |
chrX | 54802745 | 54821015 | ||
| a0001c0003 | 0/0 | 1818 | 16 | 16 | 0 | 0 | 0 | 0 | MAGED2_chrX_54802745_54821015 | MAGED2 | ATGTC others(1813): Show |
chrX | 54802745 | 54821015 | ||
| a0001c0004 | 0/0 | 1818 | 9 | 0 | 9 | 0 | 0 | 0 | MAGED2_chrX_54802745_54821015 | MAGED2 | ATGTC others(1813): Show |
chrX | 54802745 | 54821015 | ||
| a0001c0006 | 0/0 | 1818 | 4 | 3 | 1 | 0 | 0 | 0 | MAGED2_chrX_54802745_54821015 | MAGED2 | ATGTC others(1813): Show |
chrX | 54802745 | 54821015 | ||
| a0001c0008 | 0/0 | 1818 | 1 | 1 | 0 | 0 | 0 | 0 | MAGED2_chrX_54802745_54821015 | MAGED2 | ATGTC others(1813): Show |
chrX | 54802745 | 54821015 | ||
| a0001c0009 | 0/0 | 1818 | 1 | 1 | 0 | 0 | 0 | 0 | MAGED2_chrX_54802745_54821015 | MAGED2 | ATGTC others(1813): Show |
chrX | 54802745 | 54821015 | ||
| a0001c0010 | 0/0 | 1818 | 1 | 1 | 0 | 0 | 0 | 0 | MAGED2_chrX_54802745_54821015 | MAGED2 | ATGTC others(1813): Show |
chrX | 54802745 | 54821015 | ||
| a0002c0005 | 0/0 | 1818 | 7 | 7 | 0 | 0 | 0 | 0 | MAGED2_chrX_54802745_54821015 | MAGED2 | ATGTC others(1813): Show |
chrX | 54802745 | 54821015 | ||
| a0003c0007 | 0/0 | 1818 | 3 | 0 | 0 | 3 | 0 | 0 | MAGED2_chrX_54802745_54821015 | MAGED2 | ATGTC others(1813): Show |
chrX | 54802745 | 54821015 | ||
| a0004c0013 | 0/0 | 1817 | 1 | 0 | 1 | 0 | 0 | 0 | MAGED2_chrX_54802745_54821015 | MAGED2 | ATGTC others(1812): Show |
chrX | 54802745 | 54821015 | ||
| a0005c0012 | 0/0 | 1819 | 1 | 0 | 0 | 1 | 0 | 0 | MAGED2_chrX_54802745_54821015 | MAGED2 | ATGTC others(1814): Show |
chrX | 54802745 | 54821015 | ||
| a0006c0011 | 0/0 | 1817 | 1 | 0 | 0 | 1 | 0 | 0 | MAGED2_chrX_54802745_54821015 | MAGED2 | ATGTC others(1812): Show |
chrX | 54802745 | 54821015 | ||
| a0007c0014 | 0/0 | 1818 | 1 | 0 | 0 | 1 | 0 | 0 | MAGED2_chrX_54802745_54821015 | MAGED2 | ATGTC others(1813): Show |
chrX | 54802745 | 54821015 |
| acthapid | grch38chm13v2 | tlen | total | AFR | AMR | EAS | EUR | SAS | regionname | genename | tseq | chr | start | end |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| a0001c0001t0001 | 0/0 | 2051 | 148 | 26 | 18 | 83 | 5 | 16 | MAGED2_chrX_54802745_54821015 | MAGED2 | GAGAC others(2046): Show |
chrX | 54802745 | 54821015 |
| a0001c0002t0001 | 0/0 | 2051 | 123 | 23 | 31 | 49 | 6 | 14 | MAGED2_chrX_54802745_54821015 | MAGED2 | GAGAC others(2046): Show |
chrX | 54802745 | 54821015 |
| a0001c0003t0001 | 0/0 | 2051 | 16 | 16 | 0 | 0 | 0 | 0 | MAGED2_chrX_54802745_54821015 | MAGED2 | GAGAC others(2046): Show |
chrX | 54802745 | 54821015 |
| a0001c0004t0001 | 0/0 | 2051 | 9 | 0 | 9 | 0 | 0 | 0 | MAGED2_chrX_54802745_54821015 | MAGED2 | GAGAC others(2046): Show |
chrX | 54802745 | 54821015 |
| a0001c0006t0001 | 0/0 | 2051 | 4 | 3 | 1 | 0 | 0 | 0 | MAGED2_chrX_54802745_54821015 | MAGED2 | GAGAC others(2046): Show |
chrX | 54802745 | 54821015 |
| a0001c0008t0001 | 0/0 | 2051 | 1 | 1 | 0 | 0 | 0 | 0 | MAGED2_chrX_54802745_54821015 | MAGED2 | GAGAC others(2046): Show |
chrX | 54802745 | 54821015 |
| a0001c0009t0001 | 0/0 | 2051 | 1 | 1 | 0 | 0 | 0 | 0 | MAGED2_chrX_54802745_54821015 | MAGED2 | GAGAC others(2046): Show |
chrX | 54802745 | 54821015 |
| a0001c0010t0001 | 0/0 | 2051 | 1 | 1 | 0 | 0 | 0 | 0 | MAGED2_chrX_54802745_54821015 | MAGED2 | GAGAC others(2046): Show |
chrX | 54802745 | 54821015 |
| a0002c0005t0001 | 0/0 | 2051 | 7 | 7 | 0 | 0 | 0 | 0 | MAGED2_chrX_54802745_54821015 | MAGED2 | GAGAC others(2046): Show |
chrX | 54802745 | 54821015 |
| a0003c0007t0001 | 0/0 | 2051 | 3 | 0 | 0 | 3 | 0 | 0 | MAGED2_chrX_54802745_54821015 | MAGED2 | GAGAC others(2046): Show |
chrX | 54802745 | 54821015 |
| a0004c0013t0001 | 0/0 | 2050 | 1 | 0 | 1 | 0 | 0 | 0 | MAGED2_chrX_54802745_54821015 | MAGED2 | GAGAC others(2045): Show |
chrX | 54802745 | 54821015 |
| a0005c0012t0001 | 0/0 | 2052 | 1 | 0 | 0 | 1 | 0 | 0 | MAGED2_chrX_54802745_54821015 | MAGED2 | GAGAC others(2047): Show |
chrX | 54802745 | 54821015 |
| a0006c0011t0001 | 0/0 | 2050 | 1 | 0 | 0 | 1 | 0 | 0 | MAGED2_chrX_54802745_54821015 | MAGED2 | GAGAC others(2045): Show |
chrX | 54802745 | 54821015 |
| a0007c0014t0001 | 0/0 | 2051 | 1 | 0 | 0 | 1 | 0 | 0 | MAGED2_chrX_54802745_54821015 | MAGED2 | GAGAC others(2046): Show |
chrX | 54802745 | 54821015 |
| actghapid | grch38/chm13v2 | total | AFR | AMR | EAS | EUR | SAS | regionname | genename | chr | start | end |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| a0001c0001t0001g0001 | 0/0 | 114 | 13 | 16 | 70 | 5 | 10 | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| a0001c0001t0001g0004 | 0/0 | 10 | 0 | 0 | 9 | 0 | 1 | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| a0001c0001t0001g0005 | 0/0 | 8 | 7 | 1 | 0 | 0 | 0 | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| a0001c0001t0001g0009 | 0/0 | 5 | 5 | 0 | 0 | 0 | 0 | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| a0001c0001t0001g0014 | 0/0 | 2 | 0 | 0 | 0 | 0 | 2 | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| a0001c0001t0001g0015 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| a0001c0001t0001g0020 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| a0001c0001t0001g0021 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| a0001c0001t0001g0033 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| a0001c0001t0001g0035 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| a0001c0001t0001g0036 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| a0001c0001t0001g0039 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| a0001c0001t0001g0040 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| a0001c0001t0001g0041 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| a0001c0002t0001g0002 | 0/0 | 92 | 8 | 23 | 43 | 6 | 12 | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| a0001c0002t0001g0003 | 0/0 | 13 | 12 | 1 | 0 | 0 | 0 | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| a0001c0002t0001g0011 | 0/0 | 3 | 1 | 2 | 0 | 0 | 0 | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| a0001c0002t0001g0013 | 0/0 | 2 | 0 | 0 | 2 | 0 | 0 | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| a0001c0002t0001g0016 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| a0001c0002t0001g0017 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| a0001c0002t0001g0019 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| a0001c0002t0001g0022 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| a0001c0002t0001g0023 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| a0001c0002t0001g0024 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| a0001c0002t0001g0025 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| a0001c0002t0001g0026 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| a0001c0002t0001g0027 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| a0001c0002t0001g0030 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| a0001c0002t0001g0031 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| a0001c0002t0001g0032 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| a0001c0002t0001g0037 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| a0001c0003t0001g0006 | 0/0 | 6 | 6 | 0 | 0 | 0 | 0 | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| a0001c0003t0001g0007 | 0/0 | 6 | 6 | 0 | 0 | 0 | 0 | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| a0001c0003t0001g0012 | 0/0 | 3 | 3 | 0 | 0 | 0 | 0 | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| a0001c0003t0001g0038 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| a0001c0004t0001g0001 | 0/0 | 9 | 0 | 9 | 0 | 0 | 0 | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| a0001c0006t0001g0010 | 0/0 | 4 | 3 | 1 | 0 | 0 | 0 | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| a0001c0008t0001g0029 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| a0001c0009t0001g0004 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| a0001c0010t0001g0018 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| a0002c0005t0001g0008 | 0/0 | 6 | 6 | 0 | 0 | 0 | 0 | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| a0002c0005t0001g0042 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| a0003c0007t0001g0001 | 0/0 | 3 | 0 | 0 | 3 | 0 | 0 | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| a0004c0013t0001g0001 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| a0005c0012t0001g0034 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| a0006c0011t0001g0001 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| a0007c0014t0001g0002 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| sampleid | ID haplotypeid
|
ahapid | chapid | thapid | ghapid | gpopname | popname | regionname | genename | chr | start | end |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| HG00099 | hp1 | a0001 | c0001 | t0001 | g0001 | EUR | GBR | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| HG00099 | hp2 | a0001 | c0002 | t0001 | g0002 | EUR | GBR | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| HG00140 | hp1 | a0001 | c0001 | t0001 | g0001 | EUR | GBR | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| HG00280 | hp1 | a0001 | c0002 | t0001 | g0002 | EUR | FIN | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| HG00323 | hp1 | a0001 | c0001 | t0001 | g0001 | EUR | FIN | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| HG00323 | hp2 | a0001 | c0002 | t0001 | g0002 | EUR | FIN | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| HG00438 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | CHS | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| HG00438 | hp2 | a0001 | c0001 | t0001 | g0001 | EAS | CHS | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| HG00544 | hp1 | a0001 | c0002 | t0001 | g0002 | EAS | CHS | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| HG00544 | hp2 | a0001 | c0002 | t0001 | g0002 | EAS | CHS | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| HG00558 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | CHS | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| HG00558 | hp2 | a0001 | c0001 | t0001 | g0001 | EAS | CHS | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| HG00597 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | CHS | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| HG00597 | hp2 | a0001 | c0002 | t0001 | g0002 | EAS | CHS | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| HG00609 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | CHS | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| HG00621 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | CHS | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| HG00639 | hp1 | a0001 | c0001 | t0001 | g0001 | AMR | PUR | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| HG00639 | hp2 | a0001 | c0002 | t0001 | g0002 | AMR | PUR | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| HG00642 | hp1 | a0001 | c0002 | t0001 | g0002 | AMR | PUR | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| HG00673 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | CHS | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| HG00733 | hp1 | a0001 | c0002 | t0001 | g0002 | AMR | PUR | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| HG00733 | hp2 | a0001 | c0002 | t0001 | g0032 | AMR | PUR | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| HG00735 | hp1 | a0001 | c0002 | t0001 | g0003 | AMR | PUR | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| HG00735 | hp2 | a0001 | c0004 | t0001 | g0001 | AMR | PUR | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| HG00738 | hp1 | a0001 | c0001 | t0001 | g0021 | AMR | PUR | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| HG00741 | hp1 | a0001 | c0004 | t0001 | g0001 | AMR | PUR | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| HG00741 | hp2 | a0001 | c0004 | t0001 | g0001 | AMR | PUR | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| HG01069 | hp1 | a0001 | c0002 | t0001 | g0002 | AMR | PUR | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| HG01070 | hp1 | a0001 | c0001 | t0001 | g0001 | AMR | PUR | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| HG01070 | hp2 | a0001 | c0002 | t0001 | g0002 | AMR | PUR | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| HG01074 | hp1 | a0001 | c0001 | t0001 | g0001 | AMR | PUR | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| HG01081 | hp1 | a0001 | c0004 | t0001 | g0001 | AMR | PUR | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| HG01081 | hp2 | a0001 | c0001 | t0001 | g0001 | AMR | PUR | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| HG01099 | hp1 | a0001 | c0002 | t0001 | g0002 | AMR | PUR | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| HG01106 | hp1 | a0001 | c0002 | t0001 | g0002 | AMR | PUR | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| HG01109 | hp1 | a0001 | c0001 | t0001 | g0001 | AMR | PUR | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| HG01167 | hp1 | a0001 | c0002 | t0001 | g0011 | AMR | PUR | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| HG01168 | hp1 | a0004 | c0013 | t0001 | g0001 | AMR | PUR | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| HG01168 | hp2 | a0001 | c0002 | t0001 | g0016 | AMR | PUR | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| HG01169 | hp1 | a0001 | c0001 | t0001 | g0001 | AMR | PUR | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| HG01169 | hp2 | a0001 | c0002 | t0001 | g0011 | AMR | PUR | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| HG01175 | hp1 | a0001 | c0002 | t0001 | g0002 | AMR | PUR | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| HG01175 | hp2 | a0001 | c0002 | t0001 | g0002 | AMR | PUR | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| HG01192 | hp1 | a0001 | c0002 | t0001 | g0026 | AMR | PUR | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| HG01243 | hp1 | a0001 | c0001 | t0001 | g0005 | AMR | PUR | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| HG01255 | hp1 | a0001 | c0006 | t0001 | g0010 | AMR | CLM | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| HG01256 | hp1 | a0001 | c0004 | t0001 | g0001 | AMR | CLM | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| HG01257 | hp1 | a0001 | c0001 | t0001 | g0001 | AMR | CLM | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| HG01257 | hp2 | a0001 | c0002 | t0001 | g0025 | AMR | CLM | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| HG01258 | hp1 | a0001 | c0001 | t0001 | g0001 | AMR | CLM | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| HG01261 | hp1 | a0001 | c0001 | t0001 | g0001 | AMR | CLM | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| HG01346 | hp1 | a0001 | c0004 | t0001 | g0001 | AMR | CLM | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| HG01346 | hp2 | a0001 | c0002 | t0001 | g0002 | AMR | CLM | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| HG01358 | hp1 | a0001 | c0004 | t0001 | g0001 | AMR | CLM | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| HG01361 | hp1 | a0001 | c0004 | t0001 | g0001 | AMR | CLM | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| HG01361 | hp2 | a0001 | c0002 | t0001 | g0023 | AMR | CLM | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| HG01433 | hp1 | a0001 | c0002 | t0001 | g0002 | AMR | CLM | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| HG01515 | hp1 | a0001 | c0002 | t0001 | g0002 | EUR | IBS | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| HG01516 | hp1 | a0001 | c0002 | t0001 | g0002 | EUR | IBS | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| HG01516 | hp2 | a0001 | c0001 | t0001 | g0001 | EUR | IBS | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| HG01884 | hp1 | a0001 | c0002 | t0001 | g0003 | AFR | ACB | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| HG01884 | hp2 | a0001 | c0002 | t0001 | g0003 | AFR | ACB | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| HG01891 | hp1 | a0001 | c0002 | t0001 | g0003 | AFR | ACB | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| HG01891 | hp2 | a0002 | c0005 | t0001 | g0008 | AFR | ACB | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| HG01928 | hp1 | a0001 | c0002 | t0001 | g0002 | AMR | PEL | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| HG01934 | hp1 | a0001 | c0001 | t0001 | g0001 | AMR | PEL | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| HG01943 | hp1 | a0001 | c0002 | t0001 | g0002 | AMR | PEL | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| HG01952 | hp1 | a0001 | c0002 | t0001 | g0002 | AMR | PEL | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| HG01975 | hp1 | a0001 | c0002 | t0001 | g0002 | AMR | PEL | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| HG01975 | hp2 | a0001 | c0001 | t0001 | g0001 | AMR | PEL | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| HG01981 | hp1 | a0001 | c0001 | t0001 | g0001 | AMR | PEL | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| HG01981 | hp2 | a0001 | c0002 | t0001 | g0002 | AMR | PEL | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| HG01993 | hp1 | a0001 | c0001 | t0001 | g0001 | AMR | PEL | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| HG01993 | hp2 | a0001 | c0002 | t0001 | g0002 | AMR | PEL | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| HG02004 | hp1 | a0001 | c0002 | t0001 | g0002 | AMR | PEL | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| HG02004 | hp2 | a0001 | c0002 | t0001 | g0002 | AMR | PEL | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| HG02015 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | KHV | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| HG02027 | hp1 | a0001 | c0002 | t0001 | g0037 | EAS | KHV | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| HG02040 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | KHV | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| HG02055 | hp1 | a0001 | c0001 | t0001 | g0001 | AFR | ACB | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| HG02056 | hp1 | a0001 | c0002 | t0001 | g0002 | EAS | KHV | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| HG02071 | hp1 | a0001 | c0002 | t0001 | g0002 | EAS | KHV | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| HG02074 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | KHV | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| HG02080 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | KHV | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| HG02080 | hp2 | a0001 | c0002 | t0001 | g0002 | EAS | KHV | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| HG02083 | hp1 | a0001 | c0002 | t0001 | g0002 | EAS | KHV | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| HG02129 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | KHV | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| HG02132 | hp1 | a0001 | c0002 | t0001 | g0002 | EAS | KHV | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| HG02135 | hp1 | a0001 | c0002 | t0001 | g0002 | EAS | KHV | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| HG02145 | hp1 | a0001 | c0002 | t0001 | g0002 | AFR | ACB | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| HG02148 | hp1 | a0001 | c0001 | t0001 | g0001 | AMR | PEL | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| HG02148 | hp2 | a0001 | c0002 | t0001 | g0002 | AMR | PEL | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| HG02155 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | CDX | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| HG02155 | hp2 | a0001 | c0001 | t0001 | g0001 | EAS | CDX | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| HG02165 | hp1 | a0001 | c0002 | t0001 | g0002 | EAS | CDX | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| HG02165 | hp2 | a0001 | c0001 | t0001 | g0001 | EAS | CDX | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| HG02257 | hp1 | a0001 | c0003 | t0001 | g0006 | AFR | ACB | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| HG02257 | hp2 | a0001 | c0002 | t0001 | g0003 | AFR | ACB | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| HG02258 | hp1 | a0001 | c0001 | t0001 | g0005 | AFR | ACB | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| HG02273 | hp1 | a0001 | c0002 | t0001 | g0002 | AMR | PEL | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| HG02273 | hp2 | a0001 | c0002 | t0001 | g0002 | AMR | PEL | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| HG02280 | hp1 | a0001 | c0002 | t0001 | g0030 | AFR | ACB | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| HG02280 | hp2 | a0001 | c0001 | t0001 | g0005 | AFR | ACB | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| HG02293 | hp1 | a0001 | c0002 | t0001 | g0002 | AMR | PEL | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| HG02293 | hp2 | a0001 | c0001 | t0001 | g0001 | AMR | PEL | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| HG02572 | hp1 | a0002 | c0005 | t0001 | g0008 | AFR | GWD | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| HG02602 | hp1 | a0001 | c0002 | t0001 | g0002 | SAS | PJL | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| HG02615 | hp1 | a0001 | c0003 | t0001 | g0012 | AFR | GWD | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| HG02615 | hp2 | a0001 | c0002 | t0001 | g0002 | AFR | GWD | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| HG02622 | hp1 | a0001 | c0001 | t0001 | g0001 | AFR | GWD | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| HG02622 | hp2 | a0001 | c0003 | t0001 | g0038 | AFR | GWD | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| HG02630 | hp1 | a0002 | c0005 | t0001 | g0008 | AFR | GWD | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| HG02630 | hp2 | a0001 | c0002 | t0001 | g0017 | AFR | GWD | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| HG02647 | hp1 | a0001 | c0003 | t0001 | g0012 | AFR | GWD | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| HG02683 | hp1 | a0001 | c0002 | t0001 | g0002 | SAS | PJL | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| HG02683 | hp2 | a0001 | c0001 | t0001 | g0040 | SAS | PJL | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| HG02698 | hp1 | a0001 | c0001 | t0001 | g0039 | SAS | PJL | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| HG02717 | hp1 | a0001 | c0001 | t0001 | g0005 | AFR | GWD | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| HG02723 | hp1 | a0001 | c0003 | t0001 | g0006 | AFR | GWD | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| HG02723 | hp2 | a0001 | c0001 | t0001 | g0001 | AFR | GWD | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| HG02735 | hp1 | a0001 | c0002 | t0001 | g0002 | SAS | PJL | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| HG02738 | hp1 | a0001 | c0001 | t0001 | g0001 | SAS | PJL | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| HG02809 | hp1 | a0001 | c0001 | t0001 | g0001 | AFR | GWD | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| HG02809 | hp2 | a0002 | c0005 | t0001 | g0042 | AFR | GWD | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| HG02818 | hp1 | a0001 | c0001 | t0001 | g0009 | AFR | GWD | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| HG02818 | hp2 | a0001 | c0001 | t0001 | g0005 | AFR | GWD | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| HG02886 | hp1 | a0001 | c0001 | t0001 | g0009 | AFR | GWD | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| HG02886 | hp2 | a0001 | c0002 | t0001 | g0003 | AFR | GWD | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| HG02895 | hp1 | a0001 | c0003 | t0001 | g0006 | AFR | GWD | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| HG02896 | hp1 | a0001 | c0001 | t0001 | g0001 | AFR | GWD | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| HG02896 | hp2 | a0001 | c0002 | t0001 | g0003 | AFR | GWD | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| HG02897 | hp1 | a0001 | c0001 | t0001 | g0001 | AFR | GWD | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| HG02897 | hp2 | a0001 | c0003 | t0001 | g0006 | AFR | GWD | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| HG02922 | hp1 | a0001 | c0006 | t0001 | g0010 | AFR | ESN | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| HG02922 | hp2 | a0001 | c0001 | t0001 | g0005 | AFR | ESN | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| HG02965 | hp1 | a0001 | c0002 | t0001 | g0002 | AFR | ESN | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| HG02970 | hp1 | a0001 | c0006 | t0001 | g0010 | AFR | ESN | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| HG02970 | hp2 | a0001 | c0008 | t0001 | g0029 | AFR | ESN | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| HG02976 | hp1 | a0001 | c0001 | t0001 | g0001 | AFR | ESN | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| HG02976 | hp2 | a0002 | c0005 | t0001 | g0008 | AFR | ESN | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| HG03017 | hp1 | a0001 | c0002 | t0001 | g0002 | SAS | PJL | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| HG03041 | hp1 | a0001 | c0002 | t0001 | g0003 | AFR | GWD | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| HG03041 | hp2 | a0001 | c0002 | t0001 | g0002 | AFR | GWD | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| HG03098 | hp1 | a0001 | c0001 | t0001 | g0009 | AFR | MSL | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| HG03130 | hp1 | a0001 | c0002 | t0001 | g0003 | AFR | ESN | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| HG03139 | hp1 | a0001 | c0002 | t0001 | g0002 | AFR | ESN | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| HG03195 | hp1 | a0001 | c0002 | t0001 | g0002 | AFR | ESN | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| HG03195 | hp2 | a0001 | c0003 | t0001 | g0007 | AFR | ESN | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| HG03209 | hp1 | a0001 | c0001 | t0001 | g0009 | AFR | MSL | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| HG03225 | hp1 | a0001 | c0001 | t0001 | g0001 | AFR | MSL | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| HG03453 | hp1 | a0002 | c0005 | t0001 | g0008 | AFR | MSL | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| HG03453 | hp2 | a0001 | c0003 | t0001 | g0012 | AFR | MSL | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| HG03486 | hp1 | a0001 | c0003 | t0001 | g0007 | AFR | MSL | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| HG03486 | hp2 | a0001 | c0009 | t0001 | g0004 | AFR | MSL | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| HG03490 | hp1 | a0001 | c0002 | t0001 | g0002 | SAS | PJL | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| HG03491 | hp1 | a0001 | c0002 | t0001 | g0002 | SAS | PJL | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| HG03491 | hp2 | a0001 | c0001 | t0001 | g0001 | SAS | PJL | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| HG03492 | hp1 | a0001 | c0001 | t0001 | g0001 | SAS | PJL | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| HG03516 | hp1 | a0001 | c0006 | t0001 | g0010 | AFR | ESN | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| HG03516 | hp2 | a0001 | c0003 | t0001 | g0007 | AFR | ESN | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| HG03540 | hp1 | a0001 | c0001 | t0001 | g0001 | AFR | GWD | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| HG03540 | hp2 | a0001 | c0001 | t0001 | g0001 | AFR | GWD | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| HG03579 | hp1 | a0001 | c0001 | t0001 | g0009 | AFR | MSL | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| HG03654 | hp1 | a0001 | c0002 | t0001 | g0002 | SAS | PJL | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| HG03669 | hp1 | a0001 | c0001 | t0001 | g0004 | SAS | PJL | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| HG03669 | hp2 | a0001 | c0001 | t0001 | g0001 | SAS | PJL | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| HG03688 | hp1 | a0001 | c0002 | t0001 | g0002 | SAS | STU | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| HG03704 | hp1 | a0001 | c0001 | t0001 | g0014 | SAS | PJL | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| HG03704 | hp2 | a0001 | c0001 | t0001 | g0014 | SAS | PJL | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| HG03710 | hp1 | a0001 | c0001 | t0001 | g0001 | SAS | PJL | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| HG03831 | hp1 | a0001 | c0002 | t0001 | g0022 | SAS | BEB | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| HG03831 | hp2 | a0001 | c0002 | t0001 | g0002 | SAS | BEB | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| HG03834 | hp1 | a0001 | c0001 | t0001 | g0001 | SAS | BEB | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| HG03834 | hp2 | a0001 | c0002 | t0001 | g0027 | SAS | BEB | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| HG03942 | hp1 | a0001 | c0001 | t0001 | g0001 | SAS | BEB | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| HG04115 | hp1 | a0001 | c0002 | t0001 | g0002 | SAS | STU | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| HG04184 | hp1 | a0001 | c0002 | t0001 | g0002 | SAS | BEB | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| HG04184 | hp2 | a0001 | c0001 | t0001 | g0001 | SAS | BEB | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| HG04199 | hp1 | a0001 | c0002 | t0001 | g0002 | SAS | STU | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| HG04204 | hp1 | a0001 | c0001 | t0001 | g0001 | SAS | STU | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| HG04228 | hp1 | a0001 | c0001 | t0001 | g0036 | SAS | STU | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| NA18522 | hp1 | a0001 | c0001 | t0001 | g0001 | AFR | YRI | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| NA18612 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | CHB | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| NA18747 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | CHB | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| NA18906 | hp1 | a0002 | c0005 | t0001 | g0008 | AFR | YRI | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| NA18906 | hp2 | a0001 | c0003 | t0001 | g0006 | AFR | YRI | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| NA18939 | hp1 | a0001 | c0002 | t0001 | g0002 | EAS | JPT | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| NA18939 | hp2 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| NA18940 | hp1 | a0001 | c0002 | t0001 | g0002 | EAS | JPT | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| NA18943 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| NA18944 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| NA18945 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| NA18948 | hp1 | a0001 | c0001 | t0001 | g0035 | EAS | JPT | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| NA18949 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| NA18949 | hp2 | a0001 | c0002 | t0001 | g0002 | EAS | JPT | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| NA18950 | hp1 | a0001 | c0002 | t0001 | g0002 | EAS | JPT | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| NA18950 | hp2 | a0001 | c0001 | t0001 | g0004 | EAS | JPT | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| NA18952 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| NA18953 | hp1 | a0001 | c0002 | t0001 | g0002 | EAS | JPT | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| NA18957 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| NA18957 | hp2 | a0001 | c0001 | t0001 | g0004 | EAS | JPT | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| NA18959 | hp1 | a0001 | c0002 | t0001 | g0002 | EAS | JPT | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| NA18960 | hp1 | a0001 | c0001 | t0001 | g0004 | EAS | JPT | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| NA18961 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| NA18962 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| NA18963 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| NA18963 | hp2 | a0001 | c0002 | t0001 | g0002 | EAS | JPT | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| NA18965 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| NA18966 | hp1 | a0003 | c0007 | t0001 | g0001 | EAS | JPT | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| NA18967 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| NA18968 | hp1 | a0001 | c0002 | t0001 | g0002 | EAS | JPT | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| NA18968 | hp2 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| NA18969 | hp1 | a0001 | c0002 | t0001 | g0002 | EAS | JPT | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| NA18969 | hp2 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| NA18970 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| NA18971 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| NA18972 | hp1 | a0001 | c0002 | t0001 | g0013 | EAS | JPT | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| NA18972 | hp2 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| NA18973 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| NA18973 | hp2 | a0001 | c0002 | t0001 | g0013 | EAS | JPT | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| NA18974 | hp1 | a0005 | c0012 | t0001 | g0034 | EAS | JPT | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| NA18975 | hp1 | a0001 | c0001 | t0001 | g0041 | EAS | JPT | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| NA18975 | hp2 | a0001 | c0002 | t0001 | g0019 | EAS | JPT | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| NA18977 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| NA18978 | hp1 | a0003 | c0007 | t0001 | g0001 | EAS | JPT | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| NA18978 | hp2 | a0001 | c0002 | t0001 | g0002 | EAS | JPT | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| NA18979 | hp1 | a0001 | c0002 | t0001 | g0002 | EAS | JPT | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| NA18979 | hp2 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| NA18980 | hp1 | a0001 | c0002 | t0001 | g0002 | EAS | JPT | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| NA18980 | hp2 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| NA18982 | hp1 | a0001 | c0002 | t0001 | g0031 | EAS | JPT | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| NA18983 | hp1 | a0001 | c0002 | t0001 | g0002 | EAS | JPT | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| NA18984 | hp1 | a0001 | c0002 | t0001 | g0002 | EAS | JPT | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| NA18986 | hp1 | a0001 | c0002 | t0001 | g0002 | EAS | JPT | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| NA18988 | hp1 | a0001 | c0002 | t0001 | g0002 | EAS | JPT | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| NA18989 | hp1 | a0001 | c0002 | t0001 | g0002 | EAS | JPT | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| NA18990 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| NA18992 | hp1 | a0006 | c0011 | t0001 | g0001 | EAS | JPT | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| NA18992 | hp2 | a0001 | c0002 | t0001 | g0002 | EAS | JPT | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| NA18994 | hp1 | a0001 | c0002 | t0001 | g0002 | EAS | JPT | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| NA18995 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| NA18998 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| NA18998 | hp2 | a0001 | c0001 | t0001 | g0004 | EAS | JPT | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| NA18999 | hp1 | a0001 | c0002 | t0001 | g0002 | EAS | JPT | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| NA18999 | hp2 | a0001 | c0001 | t0001 | g0033 | EAS | JPT | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| NA19000 | hp1 | a0001 | c0002 | t0001 | g0002 | EAS | JPT | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| NA19001 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| NA19001 | hp2 | a0001 | c0001 | t0001 | g0015 | EAS | JPT | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| NA19002 | hp1 | a0001 | c0002 | t0001 | g0002 | EAS | JPT | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| NA19002 | hp2 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| NA19003 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| NA19003 | hp2 | a0001 | c0002 | t0001 | g0002 | EAS | JPT | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| NA19004 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| NA19005 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| NA19007 | hp1 | a0001 | c0001 | t0001 | g0004 | EAS | JPT | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| NA19009 | hp1 | a0001 | c0001 | t0001 | g0004 | EAS | JPT | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| NA19010 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| NA19010 | hp2 | a0001 | c0002 | t0001 | g0002 | EAS | JPT | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| NA19011 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| NA19011 | hp2 | a0001 | c0001 | t0001 | g0004 | EAS | JPT | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| NA19012 | hp1 | a0007 | c0014 | t0001 | g0002 | EAS | JPT | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| NA19030 | hp1 | a0001 | c0001 | t0001 | g0001 | AFR | LWK | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| NA19030 | hp2 | a0001 | c0010 | t0001 | g0018 | AFR | LWK | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| NA19043 | hp1 | a0001 | c0002 | t0001 | g0003 | AFR | LWK | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| NA19054 | hp1 | a0001 | c0001 | t0001 | g0004 | EAS | JPT | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| NA19054 | hp2 | a0001 | c0002 | t0001 | g0024 | EAS | JPT | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| NA19056 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| NA19057 | hp1 | a0001 | c0002 | t0001 | g0002 | EAS | JPT | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| NA19057 | hp2 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| NA19058 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| NA19060 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| NA19062 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| NA19063 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| NA19064 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| NA19064 | hp2 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| NA19066 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| NA19067 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| NA19068 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| NA19070 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| NA19072 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| NA19074 | hp1 | a0001 | c0002 | t0001 | g0002 | EAS | JPT | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| NA19074 | hp2 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| NA19075 | hp1 | a0001 | c0002 | t0001 | g0002 | EAS | JPT | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| NA19076 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| NA19079 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| NA19080 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| NA19080 | hp2 | a0001 | c0002 | t0001 | g0002 | EAS | JPT | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| NA19082 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| NA19084 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| NA19084 | hp2 | a0003 | c0007 | t0001 | g0001 | EAS | JPT | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| NA19085 | hp1 | a0001 | c0002 | t0001 | g0002 | EAS | JPT | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| NA19087 | hp1 | a0001 | c0002 | t0001 | g0002 | EAS | JPT | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| NA19087 | hp2 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| NA19088 | hp1 | a0001 | c0002 | t0001 | g0002 | EAS | JPT | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| NA19090 | hp1 | a0001 | c0002 | t0001 | g0002 | EAS | JPT | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| NA19090 | hp2 | a0001 | c0001 | t0001 | g0004 | EAS | JPT | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| NA19091 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| NA19240 | hp1 | a0001 | c0001 | t0001 | g0001 | AFR | YRI | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| NA19240 | hp2 | a0001 | c0002 | t0001 | g0011 | AFR | YRI | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| NA20129 | hp1 | a0001 | c0003 | t0001 | g0007 | AFR | ASW | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| NA20129 | hp2 | a0001 | c0001 | t0001 | g0020 | AFR | ASW | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| NA20752 | hp1 | a0001 | c0002 | t0001 | g0002 | EUR | TSI | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| NA20805 | hp1 | a0001 | c0001 | t0001 | g0001 | EUR | TSI | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| NA20905 | hp1 | a0001 | c0001 | t0001 | g0001 | SAS | GIH | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| HG01123 | hp1 | a0001 | c0004 | t0001 | g0001 | AMR | CLM | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| HG01123 | hp2 | a0001 | c0001 | t0001 | g0001 | AMR | CLM | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| HG02109 | hp1 | a0001 | c0002 | t0001 | g0003 | AFR | ACB | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| HG02109 | hp2 | a0001 | c0003 | t0001 | g0006 | AFR | ACB | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| HG02486 | hp1 | a0001 | c0001 | t0001 | g0005 | AFR | ACB | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| HG02559 | hp1 | a0001 | c0001 | t0001 | g0005 | AFR | ACB | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| HG02559 | hp2 | a0001 | c0003 | t0001 | g0007 | AFR | ACB | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| HG03471 | hp1 | a0001 | c0003 | t0001 | g0007 | AFR | MSL | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| HG06807 | hp1 | a0001 | c0002 | t0001 | g0003 | AFR | USA | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| HG06807 | hp2 | a0001 | c0002 | t0001 | g0002 | AFR | USA | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| NA18955 | hp1 | a0001 | c0002 | t0001 | g0002 | EAS | JPT | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| NA20300 | hp1 | a0001 | c0002 | t0001 | g0003 | AFR | USA | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| NA20300 | hp2 | a0001 | c0002 | t0001 | g0002 | AFR | USA | MAGED2_chrX_54802745_54821015 | MAGED2 | chrX | 54802745 | 54821015 |
| view | chr:pos | ref | alt | # # of ahapid:amino-acid(protein) level |
ahapids | # # of haplotypeids |
haplotypeids | annotation | impact | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length |
cds cds pos length |
aa aa pos length |
distance | status | chr | pos |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| chrX:54809755 | A | G | 1 | a0007 | 1 | NA19012.hp1 | missense_variant | MODERATE | c.79A>G | p.Met27Val | MAGED2 | ENSG00000102316.17 | transcript | ENST00000375068.6 | protein_coding | 3/13 | 166/2051 | 79/1821 | 27/606 | chrX | 54809755 | |||
| chrX:54810017 | A | G | 1 | a0003 | 3 | NA18966.hp1 NA18978.hp1 NA19084.hp2 |
missense_variant | MODERATE | c.341A>G | p.Gln114Arg | MAGED2 | ENSG00000102316.17 | transcript | ENST00000375068.6 | protein_coding | 3/13 | 428/2051 | 341/1821 | 114/606 | chrX | 54810017 | |||
| chrX:54810844 | G | C | 1 | a0002 | 7 | HG01891.hp2 HG02572.hp1 HG02630.hp1 others(4): Show |
missense_variant | MODERATE | c.561G>C | p.Glu187Asp | MAGED2 | ENSG00000102316.17 | transcript | ENST00000375068.6 | protein_coding | 4/13 | 648/2051 | 561/1821 | 187/606 | chrX | 54810844 | |||
| chrX:54814694 | TC | T | 1 | a0004 | 1 | HG01168.hp1 | frameshift_variant | HIGH | c.1310delC | p.Pro437fs | MAGED2 | ENSG00000102316.17 | transcript | ENST00000375068.6 | protein_coding | 11/13 | 1397/2051 | 1310/1821 | 437/606 | INFO_REALIGN_3_PRIME | chrX | 54814694 | ||
| chrX:54815296 | A | AT | 1 | a0005 | 1 | NA18974.hp1 | frameshift_variant | HIGH | c.1436dupT | p.Met479fs | MAGED2 | ENSG00000102316.17 | transcript | ENST00000375068.6 | protein_coding | 12/13 | 1524/2051 | 1437/1821 | 479/606 | INFO_REALIGN_3_PRIME | chrX | 54815296 | ||
| chrX:54815403 | GC | G | 1 | a0006 | 1 | NA18992.hp1 | frameshift_variant | HIGH | c.1545delC | p.Cys516fs | MAGED2 | ENSG00000102316.17 | transcript | ENST00000375068.6 | protein_coding | 12/13 | 1632/2051 | 1545/1821 | 515/606 | INFO_REALIGN_3_PRIME | chrX | 54815403 | ||
| chrX:54815432 | G | GA | 1 | a0005 | 1 | NA18974.hp1 | frameshift_variant | HIGH | c.1572dupA | p.Pro525fs | MAGED2 | ENSG00000102316.17 | transcript | ENST00000375068.6 | protein_coding | 12/13 | 1660/2051 | 1573/1821 | 525/606 | INFO_REALIGN_3_PRIME | chrX | 54815432 | ||
| chrX:54815440 | GC | G | 1 | a0005 | 1 | NA18974.hp1 | frameshift_variant | HIGH | c.1581delC | p.Ala529fs | MAGED2 | ENSG00000102316.17 | transcript | ENST00000375068.6 | protein_coding | 12/13 | 1668/2051 | 1581/1821 | 527/606 | INFO_REALIGN_3_PRIME | chrX | 54815440 | ||
| chrX:54815531 | A | T | 1 | a0005 | 1 | NA18974.hp1 | missense_variant | MODERATE | c.1670A>T | p.Asn557Ile | MAGED2 | ENSG00000102316.17 | transcript | ENST00000375068.6 | protein_coding | 12/13 | 1757/2051 | 1670/1821 | 557/606 | chrX | 54815531 | |||
| chrX:54815590 | GC | G | 1 | a0005 | 1 | NA18974.hp1 | frameshift_variant | HIGH | c.1731delC | p.Thr578fs | MAGED2 | ENSG00000102316.17 | transcript | ENST00000375068.6 | protein_coding | 12/13 | 1818/2051 | 1731/1821 | 577/606 | INFO_REALIGN_3_PRIME | chrX | 54815590 | ||
| chrX:54815646 | T | TG | 1 | a0005 | 1 | NA18974.hp1 | frameshift_variant | HIGH | c.1787dupG | p.Ser597fs | MAGED2 | ENSG00000102316.17 | transcript | ENST00000375068.6 | protein_coding | 12/13 | 1875/2051 | 1788/1821 | 596/606 | INFO_REALIGN_3_PRIME | chrX | 54815646 |
| view | chr:pos | ref | alt | # # of chapid |
chapids | # # of haplotypeids |
haplotypeids | annotation | impact | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length |
cds cds pos length |
aa aa pos length |
distance | status | chr | pos |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| chrX:54809928 | A | G | 6 | a0001c0001 a0001c0004 a0003c0007 others(3): Show |
163 | HG00099.hp1 HG00140.hp1 HG00323.hp1 others(160): Show |
synonymous_variant | LOW | c.252A>G | p.Ser84Ser | MAGED2 | ENSG00000102316.17 | transcript | ENST00000375068.6 | protein_coding | 3/13 | 339/2051 | 252/1821 | 84/606 | chrX | 54809928 | |||
| chrX:54810072 | A | G | 12 | a0001c0001 a0001c0003 a0001c0004 others(9): Show |
193 | HG00099.hp1 HG00140.hp1 HG00323.hp1 others(190): Show |
synonymous_variant | LOW | c.396A>G | p.Thr132Thr | MAGED2 | ENSG00000102316.17 | transcript | ENST00000375068.6 | protein_coding | 3/13 | 483/2051 | 396/1821 | 132/606 | chrX | 54810072 | |||
| chrX:54810156 | C | T | 1 | a0001c0010 | 1 | NA19030.hp2 | synonymous_variant | LOW | c.480C>T | p.Ala160Ala | MAGED2 | ENSG00000102316.17 | transcript | ENST00000375068.6 | protein_coding | 3/13 | 567/2051 | 480/1821 | 160/606 | chrX | 54810156 | |||
| chrX:54810907 | C | T | 9 | a0001c0001 a0001c0004 a0001c0006 others(6): Show |
175 | HG00099.hp1 HG00140.hp1 HG00323.hp1 others(172): Show |
synonymous_variant | LOW | c.624C>T | p.Ala208Ala | MAGED2 | ENSG00000102316.17 | transcript | ENST00000375068.6 | protein_coding | 4/13 | 711/2051 | 624/1821 | 208/606 | chrX | 54810907 | |||
| chrX:54811099 | A | G | 1 | a0001c0008 | 1 | HG02970.hp2 | synonymous_variant | LOW | c.816A>G | p.Pro272Pro | MAGED2 | ENSG00000102316.17 | transcript | ENST00000375068.6 | protein_coding | 4/13 | 903/2051 | 816/1821 | 272/606 | chrX | 54811099 | |||
| chrX:54811644 | C | T | 7 | a0001c0001 a0001c0004 a0001c0009 others(4): Show |
164 | HG00099.hp1 HG00140.hp1 HG00323.hp1 others(161): Show |
synonymous_variant | LOW | c.981C>T | p.Ser327Ser | MAGED2 | ENSG00000102316.17 | transcript | ENST00000375068.6 | protein_coding | 6/13 | 1068/2051 | 981/1821 | 327/606 | chrX | 54811644 | |||
| chrX:54815304 | G | A | 1 | a0001c0004 | 9 | HG00735.hp2 HG00741.hp1 HG00741.hp2 others(6): Show |
synonymous_variant | LOW | c.1443G>A | p.Ala481Ala | MAGED2 | ENSG00000102316.17 | transcript | ENST00000375068.6 | protein_coding | 12/13 | 1530/2051 | 1443/1821 | 481/606 | chrX | 54815304 |
| view | chr:pos | ref | alt | # # of thapid:transcript level |
thapids | # # of haplotypeids |
haplotypeids | annotation | impact | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length |
cds cds pos length |
aa aa pos length |
distance | status | chr | pos |
|---|
| view | chr:pos | ref | alt | # # of ghapid:genebody level |
ghapids | # # of haplotypeids |
haplotypeids | annotation | impact | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | genebody_biotype | rank | cdna cdna pos length |
cds cds pos length |
aa aa pos length |
distance | status | chr | pos |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| chrX:54808072 | G | A | 1 | a0001c0001t0001g0015 | 1 | NA19001.hp2 | intron_variant | MODIFIER | c.-30+270G>A | MAGED2 | ENSG00000102316.17 | transcript | ENST00000375068.6 | protein_coding | 1/12 | chrX | 54808072 | |||||||
| chrX:54808154 | A | G | 2 | a0002c0005t0001g0008 a0002c0005t0001g0042 |
7 | HG01891.hp2 HG02572.hp1 HG02630.hp1 others(4): Show |
intron_variant | MODIFIER | c.-30+352A>G | MAGED2 | ENSG00000102316.17 | transcript | ENST00000375068.6 | protein_coding | 1/12 | chrX | 54808154 | |||||||
| chrX:54808480 | GC | G | 1 | a0001c0002t0001g0016 | 1 | HG01168.hp2 | intron_variant | MODIFIER | c.-30+682delC | MAGED2 | ENSG00000102316.17 | transcript | ENST00000375068.6 | protein_coding | 1/12 | INFO_REALIGN_3_PRIME | chrX | 54808480 | ||||||
| chrX:54808524 | A | C | 18 | a0001c0001t0001g0001 a0001c0001t0001g0009 a0001c0001t0001g0014 others(15): Show |
149 | HG00099.hp1 HG00140.hp1 HG00323.hp1 others(146): Show |
intron_variant | MODIFIER | c.-30+722A>C | MAGED2 | ENSG00000102316.17 | transcript | ENST00000375068.6 | protein_coding | 1/12 | chrX | 54808524 | |||||||
| chrX:54808657 | GT | G | 1 | a0001c0001t0001g0014 | 2 | HG03704.hp1 HG03704.hp2 |
intron_variant | MODIFIER | c.-29-643delT | MAGED2 | ENSG00000102316.17 | transcript | ENST00000375068.6 | protein_coding | 1/12 | INFO_REALIGN_3_PRIME | chrX | 54808657 | ||||||
| chrX:54808758 | A | G | 1 | a0001c0003t0001g0012 | 3 | HG02615.hp1 HG02647.hp1 HG03453.hp2 |
intron_variant | MODIFIER | c.-29-545A>G | MAGED2 | ENSG00000102316.17 | transcript | ENST00000375068.6 | protein_coding | 1/12 | chrX | 54808758 | |||||||
| chrX:54808862 | T | C | 2 | a0001c0001t0001g0005 a0001c0002t0001g0011 |
11 | HG01167.hp1 HG01169.hp2 HG01243.hp1 others(8): Show |
intron_variant | MODIFIER | c.-29-441T>C | MAGED2 | ENSG00000102316.17 | transcript | ENST00000375068.6 | protein_coding | 1/12 | chrX | 54808862 | |||||||
| chrX:54809016 | C | T | 1 | a0001c0006t0001g0010 | 4 | HG01255.hp1 HG02922.hp1 HG02970.hp1 others(1): Show |
intron_variant | MODIFIER | c.-29-287C>T | MAGED2 | ENSG00000102316.17 | transcript | ENST00000375068.6 | protein_coding | 1/12 | chrX | 54809016 | |||||||
| chrX:54809047 | TG | T | 1 | a0001c0001t0001g0041 | 1 | NA18975.hp1 | intron_variant | MODIFIER | c.-29-250delG | MAGED2 | ENSG00000102316.17 | transcript | ENST00000375068.6 | protein_coding | 1/12 | INFO_REALIGN_3_PRIME | chrX | 54809047 | ||||||
| chrX:54809178 | G | T | 1 | a0001c0001t0001g0040 | 1 | HG02683.hp2 | intron_variant | MODIFIER | c.-29-125G>T | MAGED2 | ENSG00000102316.17 | transcript | ENST00000375068.6 | protein_coding | 1/12 | chrX | 54809178 | |||||||
| chrX:54809195 | A | AG | 1 | a0001c0001t0001g0033 | 1 | NA18999.hp2 | intron_variant | MODIFIER | c.-29-103dupG | MAGED2 | ENSG00000102316.17 | transcript | ENST00000375068.6 | protein_coding | 1/12 | INFO_REALIGN_3_PRIME | chrX | 54809195 | ||||||
| chrX:54809253 | G | T | 1 | a0001c0001t0001g0039 | 1 | HG02698.hp1 | intron_variant | MODIFIER | c.-29-50G>T | MAGED2 | ENSG00000102316.17 | transcript | ENST00000375068.6 | protein_coding | 1/12 | chrX | 54809253 | |||||||
| chrX:54809436 | C | T | 1 | a0001c0002t0001g0032 | 1 | HG00733.hp2 | intron_variant | MODIFIER | c.45+60C>T | MAGED2 | ENSG00000102316.17 | transcript | ENST00000375068.6 | protein_coding | 2/12 | chrX | 54809436 | |||||||
| chrX:54809503 | C | T | 1 | a0001c0002t0001g0031 | 1 | NA18982.hp1 | intron_variant | MODIFIER | c.45+127C>T | MAGED2 | ENSG00000102316.17 | transcript | ENST00000375068.6 | protein_coding | 2/12 | chrX | 54809503 | |||||||
| chrX:54809669 | G | A | 1 | a0001c0002t0001g0017 | 1 | HG02630.hp2 | intron_variant | MODIFIER | c.46-53G>A | MAGED2 | ENSG00000102316.17 | transcript | ENST00000375068.6 | protein_coding | 2/12 | chrX | 54809669 | |||||||
| chrX:54811194 | G | A | 4 | a0001c0003t0001g0006 a0001c0003t0001g0007 a0001c0003t0001g0012 others(1): Show |
16 | HG02109.hp2 HG02257.hp1 HG02559.hp2 others(13): Show |
intron_variant | MODIFIER | c.847-56G>A | MAGED2 | ENSG00000102316.17 | transcript | ENST00000375068.6 | protein_coding | 4/12 | chrX | 54811194 | |||||||
| chrX:54811547 | G | C | 1 | a0002c0005t0001g0042 | 1 | HG02809.hp2 | intron_variant | MODIFIER | c.911-27G>C | MAGED2 | ENSG00000102316.17 | transcript | ENST00000375068.6 | protein_coding | 5/12 | chrX | 54811547 | |||||||
| chrX:54811689 | G | C | 1 | a0001c0002t0001g0013 | 2 | NA18972.hp1 NA18973.hp2 |
intron_variant | MODIFIER | c.990+36G>C | MAGED2 | ENSG00000102316.17 | transcript | ENST00000375068.6 | protein_coding | 6/12 | chrX | 54811689 | |||||||
| chrX:54811794 | G | A | 1 | a0001c0002t0001g0019 | 1 | NA18975.hp2 | intron_variant | MODIFIER | c.990+141G>A | MAGED2 | ENSG00000102316.17 | transcript | ENST00000375068.6 | protein_coding | 6/12 | chrX | 54811794 | |||||||
| chrX:54811797 | G | T | 1 | a0001c0002t0001g0030 | 1 | HG02280.hp1 | intron_variant | MODIFIER | c.990+144G>T | MAGED2 | ENSG00000102316.17 | transcript | ENST00000375068.6 | protein_coding | 6/12 | chrX | 54811797 | |||||||
| chrX:54811919 | C | A | 21 | a0001c0001t0001g0001 a0001c0001t0001g0004 a0001c0001t0001g0005 others(18): Show |
168 | HG00099.hp1 HG00140.hp1 HG00323.hp1 others(165): Show |
intron_variant | MODIFIER | c.991-238C>A | MAGED2 | ENSG00000102316.17 | transcript | ENST00000375068.6 | protein_coding | 6/12 | chrX | 54811919 | |||||||
| chrX:54811986 | C | A | 2 | a0002c0005t0001g0008 a0002c0005t0001g0042 |
7 | HG01891.hp2 HG02572.hp1 HG02630.hp1 others(4): Show |
intron_variant | MODIFIER | c.991-171C>A | MAGED2 | ENSG00000102316.17 | transcript | ENST00000375068.6 | protein_coding | 6/12 | chrX | 54811986 | |||||||
| chrX:54812004 | G | A | 21 | a0001c0001t0001g0001 a0001c0001t0001g0004 a0001c0001t0001g0005 others(18): Show |
168 | HG00099.hp1 HG00140.hp1 HG00323.hp1 others(165): Show |
intron_variant | MODIFIER | c.991-153G>A | MAGED2 | ENSG00000102316.17 | transcript | ENST00000375068.6 | protein_coding | 6/12 | chrX | 54812004 | |||||||
| chrX:54812074 | G | A | 1 | a0001c0002t0001g0022 | 1 | HG03831.hp1 | intron_variant | MODIFIER | c.991-83G>A | MAGED2 | ENSG00000102316.17 | transcript | ENST00000375068.6 | protein_coding | 6/12 | chrX | 54812074 | |||||||
| chrX:54812352 | A | G | 1 | a0001c0003t0001g0007 | 6 | HG02559.hp2 HG03195.hp2 HG03471.hp1 others(3): Show |
intron_variant | MODIFIER | c.1085+101A>G | MAGED2 | ENSG00000102316.17 | transcript | ENST00000375068.6 | protein_coding | 7/12 | chrX | 54812352 | |||||||
| chrX:54812373 | C | T | 1 | a0001c0008t0001g0029 | 1 | HG02970.hp2 | intron_variant | MODIFIER | c.1085+122C>T | MAGED2 | ENSG00000102316.17 | transcript | ENST00000375068.6 | protein_coding | 7/12 | chrX | 54812373 | |||||||
| chrX:54812658 | A | G | 3 | a0001c0001t0001g0005 a0001c0001t0001g0021 a0001c0006t0001g0010 |
13 | HG00738.hp1 HG01243.hp1 HG01255.hp1 others(10): Show |
intron_variant | MODIFIER | c.1086-287A>G | MAGED2 | ENSG00000102316.17 | transcript | ENST00000375068.6 | protein_coding | 7/12 | chrX | 54812658 | |||||||
| chrX:54812661 | GACTCAC | G | 3 | a0001c0001t0001g0005 a0001c0001t0001g0021 a0001c0006t0001g0010 |
13 | HG00738.hp1 HG01243.hp1 HG01255.hp1 others(10): Show |
intron_variant | MODIFIER | c.1086-282_1086-277d others(8): Show |
MAGED2 | ENSG00000102316.17 | transcript | ENST00000375068.6 | protein_coding | 7/12 | INFO_REALIGN_3_PRIME | chrX | 54812661 | ||||||
| chrX:54813072 | C | A | 2 | a0001c0001t0001g0005 a0001c0001t0001g0021 |
9 | HG00738.hp1 HG01243.hp1 HG02258.hp1 others(6): Show |
intron_variant | MODIFIER | c.1166-46C>A | MAGED2 | ENSG00000102316.17 | transcript | ENST00000375068.6 | protein_coding | 8/12 | chrX | 54813072 | |||||||
| chrX:54813193 | G | A | 1 | a0001c0002t0001g0023 | 1 | HG01361.hp2 | intron_variant | MODIFIER | c.1208+33G>A | MAGED2 | ENSG00000102316.17 | transcript | ENST00000375068.6 | protein_coding | 9/12 | chrX | 54813193 | |||||||
| chrX:54813282 | G | C | 2 | a0001c0003t0001g0007 a0001c0010t0001g0018 |
7 | HG02559.hp2 HG03195.hp2 HG03471.hp1 others(4): Show |
intron_variant | MODIFIER | c.1208+122G>C | MAGED2 | ENSG00000102316.17 | transcript | ENST00000375068.6 | protein_coding | 9/12 | chrX | 54813282 | |||||||
| chrX:54813399 | A | G | 1 | a0001c0002t0001g0028 | 1 | homoSapiens_chm13v2.hp1 | intron_variant | MODIFIER | c.1209-89A>G | MAGED2 | ENSG00000102316.17 | transcript | ENST00000375068.6 | protein_coding | 9/12 | chrX | 54813399 | |||||||
| chrX:54813580 | C | T | 22 | a0001c0001t0001g0001 a0001c0001t0001g0004 a0001c0001t0001g0005 others(19): Show |
171 | HG00099.hp1 HG00140.hp1 HG00323.hp1 others(168): Show |
intron_variant | MODIFIER | c.1271+30C>T | MAGED2 | ENSG00000102316.17 | transcript | ENST00000375068.6 | protein_coding | 10/12 | chrX | 54813580 | |||||||
| chrX:54813703 | TG | T | 1 | a0001c0002t0001g0024 | 1 | NA19054.hp2 | intron_variant | MODIFIER | c.1271+156delG | MAGED2 | ENSG00000102316.17 | transcript | ENST00000375068.6 | protein_coding | 10/12 | INFO_REALIGN_3_PRIME | chrX | 54813703 | ||||||
| chrX:54813712 | G | T | 1 | a0001c0003t0001g0038 | 1 | HG02622.hp2 | intron_variant | MODIFIER | c.1271+162G>T | MAGED2 | ENSG00000102316.17 | transcript | ENST00000375068.6 | protein_coding | 10/12 | chrX | 54813712 | |||||||
| chrX:54813716 | C | CA | 1 | a0001c0002t0001g0024 | 1 | NA19054.hp2 | intron_variant | MODIFIER | c.1271+167dupA | MAGED2 | ENSG00000102316.17 | transcript | ENST00000375068.6 | protein_coding | 10/12 | INFO_REALIGN_3_PRIME | chrX | 54813716 | ||||||
| chrX:54813731 | G | C | 2 | a0001c0001t0001g0005 a0001c0001t0001g0021 |
9 | HG00738.hp1 HG01243.hp1 HG02258.hp1 others(6): Show |
intron_variant | MODIFIER | c.1271+181G>C | MAGED2 | ENSG00000102316.17 | transcript | ENST00000375068.6 | protein_coding | 10/12 | chrX | 54813731 | |||||||
| chrX:54813769 | GT | G | 1 | a0005c0012t0001g0034 | 1 | NA18974.hp1 | intron_variant | MODIFIER | c.1271+221delT | MAGED2 | ENSG00000102316.17 | transcript | ENST00000375068.6 | protein_coding | 10/12 | INFO_REALIGN_3_PRIME | chrX | 54813769 | ||||||
| chrX:54813832 | G | C | 1 | a0001c0002t0001g0025 | 1 | HG01257.hp2 | intron_variant | MODIFIER | c.1271+282G>C | MAGED2 | ENSG00000102316.17 | transcript | ENST00000375068.6 | protein_coding | 10/12 | chrX | 54813832 | |||||||
| chrX:54813859 | A | AG | 1 | a0005c0012t0001g0034 | 1 | NA18974.hp1 | intron_variant | MODIFIER | c.1271+311dupG | MAGED2 | ENSG00000102316.17 | transcript | ENST00000375068.6 | protein_coding | 10/12 | INFO_REALIGN_3_PRIME | chrX | 54813859 | ||||||
| chrX:54813952 | G | A | 3 | a0001c0002t0001g0003 a0001c0002t0001g0011 a0001c0002t0001g0017 |
17 | HG00735.hp1 HG01167.hp1 HG01169.hp2 others(14): Show |
intron_variant | MODIFIER | c.1271+402G>A | MAGED2 | ENSG00000102316.17 | transcript | ENST00000375068.6 | protein_coding | 10/12 | chrX | 54813952 | |||||||
| chrX:54814097 | AG | A | 1 | a0005c0012t0001g0034 | 1 | NA18974.hp1 | intron_variant | MODIFIER | c.1271+550delG | MAGED2 | ENSG00000102316.17 | transcript | ENST00000375068.6 | protein_coding | 10/12 | INFO_REALIGN_3_PRIME | chrX | 54814097 | ||||||
| chrX:54814233 | AACAC | A | 1 | a0001c0001t0001g0005 | 8 | HG01243.hp1 HG02258.hp1 HG02280.hp2 others(5): Show |
intron_variant | MODIFIER | c.1272-422_1272-419d others(6): Show |
MAGED2 | ENSG00000102316.17 | transcript | ENST00000375068.6 | protein_coding | 10/12 | INFO_REALIGN_3_PRIME | chrX | 54814233 | ||||||
| chrX:54814237 | C | CA | 1 | a0005c0012t0001g0034 | 1 | NA18974.hp1 | intron_variant | MODIFIER | c.1272-423dupA | MAGED2 | ENSG00000102316.17 | transcript | ENST00000375068.6 | protein_coding | 10/12 | INFO_REALIGN_3_PRIME | chrX | 54814237 | ||||||
| chrX:54814334 | TG | T | 1 | a0005c0012t0001g0034 | 1 | NA18974.hp1 | intron_variant | MODIFIER | c.1272-324delG | MAGED2 | ENSG00000102316.17 | transcript | ENST00000375068.6 | protein_coding | 10/12 | INFO_REALIGN_3_PRIME | chrX | 54814334 | ||||||
| chrX:54814486 | C | T | 2 | a0001c0001t0001g0009 a0001c0001t0001g0020 |
6 | HG02818.hp1 HG02886.hp1 HG03098.hp1 others(3): Show |
intron_variant | MODIFIER | c.1272-175C>T | MAGED2 | ENSG00000102316.17 | transcript | ENST00000375068.6 | protein_coding | 10/12 | chrX | 54814486 | |||||||
| chrX:54814579 | G | GC | 1 | a0005c0012t0001g0034 | 1 | NA18974.hp1 | intron_variant | MODIFIER | c.1272-80dupC | MAGED2 | ENSG00000102316.17 | transcript | ENST00000375068.6 | protein_coding | 10/12 | INFO_REALIGN_3_PRIME | chrX | 54814579 | ||||||
| chrX:54814779 | AT | A | 1 | a0005c0012t0001g0034 | 1 | NA18974.hp1 | splice_region_variant&intron_variant | LOW | c.1386+6delT | MAGED2 | ENSG00000102316.17 | transcript | ENST00000375068.6 | protein_coding | 11/12 | INFO_REALIGN_3_PRIME | chrX | 54814779 | ||||||
| chrX:54814830 | TG | T | 1 | a0005c0012t0001g0034 | 1 | NA18974.hp1 | intron_variant | MODIFIER | c.1386+59delG | MAGED2 | ENSG00000102316.17 | transcript | ENST00000375068.6 | protein_coding | 11/12 | INFO_REALIGN_3_PRIME | chrX | 54814830 | ||||||
| chrX:54814955 | A | AT | 1 | a0005c0012t0001g0034 | 1 | NA18974.hp1 | intron_variant | MODIFIER | c.1386+182dupT | MAGED2 | ENSG00000102316.17 | transcript | ENST00000375068.6 | protein_coding | 11/12 | INFO_REALIGN_3_PRIME | chrX | 54814955 | ||||||
| chrX:54815024 | G | A | 18 | a0001c0001t0001g0001 a0001c0001t0001g0004 a0001c0001t0001g0009 others(15): Show |
155 | HG00099.hp1 HG00140.hp1 HG00323.hp1 others(152): Show |
intron_variant | MODIFIER | c.1387-224G>A | MAGED2 | ENSG00000102316.17 | transcript | ENST00000375068.6 | protein_coding | 11/12 | chrX | 54815024 | |||||||
| chrX:54815071 | G | GA | 1 | a0005c0012t0001g0034 | 1 | NA18974.hp1 | intron_variant | MODIFIER | c.1387-177_1387-176i others(3): Show |
MAGED2 | ENSG00000102316.17 | transcript | ENST00000375068.6 | protein_coding | 11/12 | chrX | 54815071 | |||||||
| chrX:54815077 | A | AC | 1 | a0005c0012t0001g0034 | 1 | NA18974.hp1 | intron_variant | MODIFIER | c.1387-170dupC | MAGED2 | ENSG00000102316.17 | transcript | ENST00000375068.6 | protein_coding | 11/12 | INFO_REALIGN_3_PRIME | chrX | 54815077 | ||||||
| chrX:54815078 | C | A | 2 | a0001c0001t0001g0005 a0001c0001t0001g0021 |
9 | HG00738.hp1 HG01243.hp1 HG02258.hp1 others(6): Show |
intron_variant | MODIFIER | c.1387-170C>A | MAGED2 | ENSG00000102316.17 | transcript | ENST00000375068.6 | protein_coding | 11/12 | chrX | 54815078 | |||||||
| chrX:54815122 | T | A | 1 | a0001c0002t0001g0026 | 1 | HG01192.hp1 | intron_variant | MODIFIER | c.1387-126T>A | MAGED2 | ENSG00000102316.17 | transcript | ENST00000375068.6 | protein_coding | 11/12 | chrX | 54815122 | |||||||
| chrX:54815125 | C | T | 1 | a0001c0001t0001g0036 | 1 | HG04228.hp1 | intron_variant | MODIFIER | c.1387-123C>T | MAGED2 | ENSG00000102316.17 | transcript | ENST00000375068.6 | protein_coding | 11/12 | chrX | 54815125 | |||||||
| chrX:54815135 | G | GA | 2 | a0001c0001t0001g0005 a0001c0001t0001g0021 |
9 | HG00738.hp1 HG01243.hp1 HG02258.hp1 others(6): Show |
intron_variant | MODIFIER | c.1387-113_1387-112i others(3): Show |
MAGED2 | ENSG00000102316.17 | transcript | ENST00000375068.6 | protein_coding | 11/12 | chrX | 54815135 | |||||||
| chrX:54815179 | A | G | 1 | a0001c0001t0001g0035 | 1 | NA18948.hp1 | intron_variant | MODIFIER | c.1387-69A>G | MAGED2 | ENSG00000102316.17 | transcript | ENST00000375068.6 | protein_coding | 11/12 | chrX | 54815179 | |||||||
| chrX:54815202 | TG | T | 1 | a0005c0012t0001g0034 | 1 | NA18974.hp1 | intron_variant | MODIFIER | c.1387-44delG | MAGED2 | ENSG00000102316.17 | transcript | ENST00000375068.6 | protein_coding | 11/12 | INFO_REALIGN_3_PRIME | chrX | 54815202 | ||||||
| chrX:54815697 | G | GC | 1 | a0005c0012t0001g0034 | 1 | NA18974.hp1 | intron_variant | MODIFIER | c.*8+9dupC | MAGED2 | ENSG00000102316.17 | transcript | ENST00000375068.6 | protein_coding | 12/12 | INFO_REALIGN_3_PRIME | chrX | 54815697 | ||||||
| chrX:54815845 | A | G | 2 | a0001c0002t0001g0027 a0001c0006t0001g0010 |
5 | HG01255.hp1 HG02922.hp1 HG02970.hp1 others(2): Show |
intron_variant | MODIFIER | c.*9-36A>G | MAGED2 | ENSG00000102316.17 | transcript | ENST00000375068.6 | protein_coding | 12/12 | chrX | 54815845 | |||||||
| chrX:54815873 | G | GT | 1 | a0005c0012t0001g0034 | 1 | NA18974.hp1 | splice_region_variant&intron_variant | LOW | c.*9-4dupT | MAGED2 | ENSG00000102316.17 | transcript | ENST00000375068.6 | protein_coding | 12/12 | INFO_REALIGN_3_PRIME | chrX | 54815873 |