geneid | 441873 |
---|---|
ensemblid | ENSG00000229571.7 |
hgncid | 49179 |
symbol | PRAMEF25 |
name | PRAME family member 25 |
refseq_nuc | NM_001310134.3 |
refseq_prot | NP_001297063.1 |
ensembl_nuc | ENST00000619661.3 |
ensembl_prot | ENSP00000478309.2 |
mane_status | MANE Select |
chr | chr1 |
start | 13070774 |
end | 13077884 |
strand | + |
ver | v1.2 |
region | chr1:13070774-13077884 |
region5000 | chr1:13065774-13082884 |
regionname0 | PRAMEF25_chr1_13070774_13077884 |
regionname5000 | PRAMEF25_chr1_13065774_13082884 |
ahapid | grch38/chm13v2 1/0: The haplotype type is the same as GRCh380/1: The haplotype type is the same as CHM13v20/0: The haplotype type matches neither GRCh38 nor CHM13v21/1: The haplotype type is the same on both GRCh38 and CHM13v2
|
alen | total | AFR | AMR | EAS | EUR | SAS | JPT | regionname | genename | aa | chr | start | end |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
a0001 | 0/0 | 478 | 50 | 4 | 10 | 33 | 0 | 3 | 29 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | copy fasta | chr1 | 13065774 | 13082884 |
a0002 | 0/0 | 478 | 40 | 6 | 7 | 16 | 4 | 7 | 12 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | copy fasta | chr1 | 13065774 | 13082884 |
a0003 | 0/0 | 478 | 20 | 4 | 7 | 9 | 0 | 0 | 9 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | copy fasta | chr1 | 13065774 | 13082884 |
a0004 | 0/0 | 478 | 15 | 0 | 4 | 10 | 0 | 1 | 7 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | copy fasta | chr1 | 13065774 | 13082884 |
a0005 | 0/0 | 478 | 6 | 2 | 0 | 2 | 0 | 2 | 2 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | copy fasta | chr1 | 13065774 | 13082884 |
a0006 | 0/0 | 478 | 4 | 4 | 0 | 0 | 0 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | copy fasta | chr1 | 13065774 | 13082884 |
a0007 | 0/0 | 478 | 3 | 0 | 0 | 3 | 0 | 0 | 3 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | copy fasta | chr1 | 13065774 | 13082884 |
a0008 | 0/0 | 478 | 2 | 0 | 2 | 0 | 0 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | copy fasta | chr1 | 13065774 | 13082884 |
a0009 | 0/0 | 22 | 1 | 0 | 0 | 1 | 0 | 0 | 1 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | copy fasta | chr1 | 13065774 | 13082884 |
a0010 | 0/0 | 478 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | copy fasta | chr1 | 13065774 | 13082884 |
a0011 | 0/0 | 478 | 1 | 0 | 0 | 1 | 0 | 0 | 1 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | copy fasta | chr1 | 13065774 | 13082884 |
a0012 | 0/0 | 478 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | copy fasta | chr1 | 13065774 | 13082884 |
a0013 | 0/0 | 478 | 1 | 0 | 0 | 1 | 0 | 0 | 1 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | copy fasta | chr1 | 13065774 | 13082884 |
a0014 | 0/0 | 478 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | copy fasta | chr1 | 13065774 | 13082884 |
a0015 | 0/0 | 478 | 1 | 0 | 0 | 1 | 0 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | copy fasta | chr1 | 13065774 | 13082884 |
a0016 | 0/0 | 478 | 1 | 0 | 0 | 1 | 0 | 0 | 1 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | copy fasta | chr1 | 13065774 | 13082884 |
a0017 | 0/0 | 430 | 1 | 0 | 0 | 1 | 0 | 0 | 1 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | copy fasta | chr1 | 13065774 | 13082884 |
a0018 | 0/0 | 478 | 1 | 0 | 0 | 1 | 0 | 0 | 1 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | copy fasta | chr1 | 13065774 | 13082884 |
a0019 | 0/0 | 478 | 1 | 0 | 0 | 0 | 0 | 1 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | copy fasta | chr1 | 13065774 | 13082884 |
a0020 | 0/0 | 478 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | copy fasta | chr1 | 13065774 | 13082884 |
a0021 | 0/0 | 478 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | copy fasta | chr1 | 13065774 | 13082884 |
a0022 | 0/0 | 478 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | copy fasta | chr1 | 13065774 | 13082884 |
a0023 | 0/0 | 228 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | copy fasta | chr1 | 13065774 | 13082884 |
a0024 | 0/0 | 478 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | copy fasta | chr1 | 13065774 | 13082884 |
chapid | grch38/chm13v2 1/0: The haplotype type is the same as GRCh380/1: The haplotype type is the same as CHM13v20/0: The haplotype type matches neither GRCh38 nor CHM13v21/1: The haplotype type is the same on both GRCh38 and CHM13v2
|
clen | total | AFR | AMR | EAS | EUR | SAS | regionname | genename | cseq | chr | start | end |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
c0001 | 0/0 | 1437 | 46 | 4 | 8 | 32 | 0 | 2 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | copy fasta | chr1 | 13065774 | 13082884 |
c0002 | 0/0 | 1437 | 40 | 6 | 7 | 16 | 4 | 7 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | copy fasta | chr1 | 13065774 | 13082884 |
c0003 | 0/0 | 1437 | 20 | 4 | 7 | 9 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | copy fasta | chr1 | 13065774 | 13082884 |
c0004 | 0/0 | 1437 | 13 | 0 | 4 | 8 | 0 | 1 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | copy fasta | chr1 | 13065774 | 13082884 |
c0005 | 0/0 | 1437 | 6 | 2 | 0 | 2 | 0 | 2 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | copy fasta | chr1 | 13065774 | 13082884 |
c0006 | 0/0 | 1437 | 3 | 0 | 0 | 3 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | copy fasta | chr1 | 13065774 | 13082884 |
c0007 | 0/0 | 1437 | 3 | 3 | 0 | 0 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | copy fasta | chr1 | 13065774 | 13082884 |
c0008 | 0/0 | 1437 | 2 | 0 | 2 | 0 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | copy fasta | chr1 | 13065774 | 13082884 |
c0009 | 0/0 | 1437 | 2 | 0 | 2 | 0 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | copy fasta | chr1 | 13065774 | 13082884 |
c0010 | 0/0 | 1437 | 2 | 0 | 0 | 2 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | copy fasta | chr1 | 13065774 | 13082884 |
c0011 | 0/0 | 1437 | 1 | 1 | 0 | 0 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | copy fasta | chr1 | 13065774 | 13082884 |
c0012 | 0/0 | 1437 | 1 | 1 | 0 | 0 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | copy fasta | chr1 | 13065774 | 13082884 |
c0013 | 0/0 | 1437 | 1 | 0 | 0 | 1 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | copy fasta | chr1 | 13065774 | 13082884 |
c0014 | 0/0 | 1437 | 1 | 0 | 0 | 1 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | copy fasta | chr1 | 13065774 | 13082884 |
c0015 | 0/0 | 1437 | 1 | 0 | 0 | 1 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | copy fasta | chr1 | 13065774 | 13082884 |
c0016 | 0/0 | 1420 | 1 | 0 | 0 | 1 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | copy fasta | chr1 | 13065774 | 13082884 |
c0017 | 0/0 | 1437 | 1 | 0 | 0 | 1 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | copy fasta | chr1 | 13065774 | 13082884 |
c0018 | 0/0 | 1437 | 1 | 0 | 0 | 0 | 0 | 1 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | copy fasta | chr1 | 13065774 | 13082884 |
c0019 | 0/0 | 1437 | 1 | 1 | 0 | 0 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | copy fasta | chr1 | 13065774 | 13082884 |
c0020 | 0/0 | 1437 | 1 | 0 | 0 | 1 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | copy fasta | chr1 | 13065774 | 13082884 |
c0021 | 0/0 | 1437 | 1 | 0 | 0 | 0 | 0 | 1 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | copy fasta | chr1 | 13065774 | 13082884 |
c0022 | 0/0 | 1437 | 1 | 1 | 0 | 0 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | copy fasta | chr1 | 13065774 | 13082884 |
c0023 | 0/0 | 1437 | 1 | 0 | 0 | 1 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | copy fasta | chr1 | 13065774 | 13082884 |
c0024 | 0/0 | 1437 | 1 | 1 | 0 | 0 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | copy fasta | chr1 | 13065774 | 13082884 |
c0025 | 0/0 | 1437 | 1 | 1 | 0 | 0 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | copy fasta | chr1 | 13065774 | 13082884 |
c0026 | 0/0 | 1437 | 1 | 0 | 0 | 1 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | copy fasta | chr1 | 13065774 | 13082884 |
c0027 | 0/0 | 1437 | 1 | 1 | 0 | 0 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | copy fasta | chr1 | 13065774 | 13082884 |
c0028 | 0/0 | 1437 | 1 | 1 | 0 | 0 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | copy fasta | chr1 | 13065774 | 13082884 |
c0029 | 0/0 | 1437 | 1 | 1 | 0 | 0 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | copy fasta | chr1 | 13065774 | 13082884 |
thapid | grch38chm13v2 1/0: The haplotype type is the same as GRCh380/1: The haplotype type is the same as CHM13v20/0: The haplotype type matches neither GRCh38 nor CHM13v21/1: The haplotype type is the same on both GRCh38 and CHM13v2
|
tlen | total | AFR | AMR | EAS | EUR | SAS | regionname | genename | tseq | chr | start | end |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
t0001 | 0/0 | 483 | 100 | 7 | 25 | 55 | 3 | 10 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | copy fasta | chr1 | 13065774 | 13082884 |
t0002 | 0/0 | 483 | 21 | 12 | 0 | 7 | 0 | 2 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | copy fasta | chr1 | 13065774 | 13082884 |
t0003 | 0/0 | 483 | 12 | 0 | 0 | 12 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | copy fasta | chr1 | 13065774 | 13082884 |
t0004 | 0/0 | 483 | 6 | 0 | 4 | 2 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | copy fasta | chr1 | 13065774 | 13082884 |
t0005 | 0/0 | 483 | 3 | 2 | 0 | 0 | 1 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | copy fasta | chr1 | 13065774 | 13082884 |
t0006 | 0/0 | 483 | 2 | 0 | 0 | 2 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | copy fasta | chr1 | 13065774 | 13082884 |
t0007 | 0/0 | 483 | 2 | 2 | 0 | 0 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | copy fasta | chr1 | 13065774 | 13082884 |
t0008 | 0/0 | 349 | 2 | 1 | 1 | 0 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | copy fasta | chr1 | 13065774 | 13082884 |
t0009 | 0/0 | 484 | 1 | 0 | 0 | 0 | 0 | 1 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | copy fasta | chr1 | 13065774 | 13082884 |
t0010 | 0/0 | 484 | 1 | 0 | 0 | 1 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | copy fasta | chr1 | 13065774 | 13082884 |
t0011 | 0/0 | 483 | 1 | 1 | 0 | 0 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | copy fasta | chr1 | 13065774 | 13082884 |
t0012 | 0/0 | 483 | 1 | 1 | 0 | 0 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | copy fasta | chr1 | 13065774 | 13082884 |
t0013 | 0/0 | 483 | 1 | 1 | 0 | 0 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | copy fasta | chr1 | 13065774 | 13082884 |
t0014 | 0/0 | 483 | 1 | 0 | 0 | 1 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | copy fasta | chr1 | 13065774 | 13082884 |
t0015 | 0/0 | 483 | 1 | 1 | 0 | 0 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | copy fasta | chr1 | 13065774 | 13082884 |
t0016 | 0/0 | 483 | 1 | 0 | 0 | 0 | 0 | 1 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | copy fasta | chr1 | 13065774 | 13082884 |
ghapid | grch38/chm13v2 1/0: The haplotype type is the same as GRCh380/1: The haplotype type is the same as CHM13v20/0: The haplotype type matches neither GRCh38 nor CHM13v21/1: The haplotype type is the same on both GRCh38 and CHM13v2
|
total | AFR | AMR | EAS | EUR | SAS | regionname | genename | chr | start | end |
---|---|---|---|---|---|---|---|---|---|---|---|---|
g0001 | 0/0 | 19 | 0 | 3 | 14 | 0 | 2 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
g0002 | 0/0 | 14 | 1 | 5 | 7 | 1 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
g0003 | 0/0 | 6 | 1 | 3 | 0 | 0 | 2 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
g0004 | 0/0 | 6 | 0 | 1 | 4 | 0 | 1 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
g0005 | 0/0 | 4 | 1 | 0 | 3 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
g0006 | 0/0 | 3 | 0 | 0 | 3 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
g0007 | 0/0 | 3 | 0 | 0 | 3 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
g0008 | 0/0 | 3 | 0 | 0 | 3 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
g0009 | 0/0 | 3 | 0 | 2 | 1 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
g0010 | 0/0 | 3 | 1 | 0 | 0 | 0 | 2 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
g0011 | 0/0 | 2 | 2 | 0 | 0 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
g0012 | 0/0 | 2 | 0 | 1 | 1 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
g0013 | 0/0 | 2 | 0 | 0 | 2 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
g0014 | 0/0 | 2 | 0 | 1 | 0 | 0 | 1 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
g0015 | 0/0 | 2 | 0 | 0 | 2 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
g0016 | 0/0 | 2 | 0 | 2 | 0 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
g0017 | 0/0 | 2 | 1 | 1 | 0 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
g0018 | 0/0 | 2 | 0 | 0 | 2 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
g0019 | 0/0 | 2 | 2 | 0 | 0 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
g0020 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
g0021 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
g0022 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
g0023 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
g0024 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
g0025 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
g0026 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
g0027 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
g0028 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
g0029 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
g0030 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
g0031 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
g0032 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
g0033 | 0/0 | 1 | 0 | 0 | 0 | 1 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
g0034 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
g0035 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
g0036 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
g0037 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
g0038 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
g0039 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
g0040 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
g0041 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
g0042 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
g0043 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
g0044 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
g0045 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
g0046 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
g0047 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
g0048 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
g0049 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
g0050 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
g0051 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
g0052 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
g0053 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
g0054 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
g0055 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
g0056 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
g0057 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
g0058 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
g0059 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
g0060 | 0/0 | 1 | 0 | 0 | 0 | 1 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
g0061 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
g0062 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
g0063 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
g0064 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
g0065 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
g0066 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
g0067 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
g0068 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
g0069 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
g0070 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
g0071 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
g0072 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
g0073 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
g0074 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
g0075 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
g0076 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
g0077 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
g0078 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
g0079 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
g0080 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
g0081 | 0/0 | 1 | 0 | 0 | 0 | 1 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
g0082 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
g0083 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
g0084 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
g0085 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
g0086 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
g0087 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
g0088 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
g0089 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
g0090 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
g0091 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
g0092 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
g0093 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
achapid | grch38/chm13v2 1/0: The haplotype type is the same as GRCh380/1: The haplotype type is the same as CHM13v20/0: The haplotype type matches neither GRCh38 nor CHM13v21/1: The haplotype type is the same on both GRCh38 and CHM13v2
|
clen | total | AFR | AMR | EAS | EUR | SAS | regionname | genename | cseq | chr | start | end |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
a0001c0001 | 0/0 | 1437 | 46 | 4 | 8 | 32 | 0 | 2 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | copy fasta | chr1 | 13065774 | 13082884 |
a0001c0008 | 0/0 | 1437 | 2 | 0 | 2 | 0 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | copy fasta | chr1 | 13065774 | 13082884 |
a0001c0017 | 0/0 | 1437 | 1 | 0 | 0 | 1 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | copy fasta | chr1 | 13065774 | 13082884 |
a0001c0018 | 0/0 | 1437 | 1 | 0 | 0 | 0 | 0 | 1 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | copy fasta | chr1 | 13065774 | 13082884 |
a0002c0002 | 0/0 | 1437 | 40 | 6 | 7 | 16 | 4 | 7 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | copy fasta | chr1 | 13065774 | 13082884 |
a0003c0003 | 0/0 | 1437 | 20 | 4 | 7 | 9 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | copy fasta | chr1 | 13065774 | 13082884 |
a0004c0004 | 0/0 | 1437 | 13 | 0 | 4 | 8 | 0 | 1 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | copy fasta | chr1 | 13065774 | 13082884 |
a0004c0010 | 0/0 | 1437 | 2 | 0 | 0 | 2 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | copy fasta | chr1 | 13065774 | 13082884 |
a0005c0005 | 0/0 | 1437 | 6 | 2 | 0 | 2 | 0 | 2 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | copy fasta | chr1 | 13065774 | 13082884 |
a0006c0007 | 0/0 | 1437 | 3 | 3 | 0 | 0 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | copy fasta | chr1 | 13065774 | 13082884 |
a0006c0029 | 0/0 | 1437 | 1 | 1 | 0 | 0 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | copy fasta | chr1 | 13065774 | 13082884 |
a0007c0006 | 0/0 | 1437 | 3 | 0 | 0 | 3 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | copy fasta | chr1 | 13065774 | 13082884 |
a0008c0009 | 0/0 | 1437 | 2 | 0 | 2 | 0 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | copy fasta | chr1 | 13065774 | 13082884 |
a0009c0026 | 0/0 | 1437 | 1 | 0 | 0 | 1 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | copy fasta | chr1 | 13065774 | 13082884 |
a0010c0024 | 0/0 | 1437 | 1 | 1 | 0 | 0 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | copy fasta | chr1 | 13065774 | 13082884 |
a0011c0023 | 0/0 | 1437 | 1 | 0 | 0 | 1 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | copy fasta | chr1 | 13065774 | 13082884 |
a0012c0011 | 0/0 | 1437 | 1 | 1 | 0 | 0 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | copy fasta | chr1 | 13065774 | 13082884 |
a0013c0013 | 0/0 | 1437 | 1 | 0 | 0 | 1 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | copy fasta | chr1 | 13065774 | 13082884 |
a0014c0019 | 0/0 | 1437 | 1 | 1 | 0 | 0 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | copy fasta | chr1 | 13065774 | 13082884 |
a0015c0014 | 0/0 | 1437 | 1 | 0 | 0 | 1 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | copy fasta | chr1 | 13065774 | 13082884 |
a0016c0015 | 0/0 | 1437 | 1 | 0 | 0 | 1 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | copy fasta | chr1 | 13065774 | 13082884 |
a0017c0016 | 0/0 | 1420 | 1 | 0 | 0 | 1 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | copy fasta | chr1 | 13065774 | 13082884 |
a0018c0020 | 0/0 | 1437 | 1 | 0 | 0 | 1 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | copy fasta | chr1 | 13065774 | 13082884 |
a0019c0021 | 0/0 | 1437 | 1 | 0 | 0 | 0 | 0 | 1 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | copy fasta | chr1 | 13065774 | 13082884 |
a0020c0022 | 0/0 | 1437 | 1 | 1 | 0 | 0 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | copy fasta | chr1 | 13065774 | 13082884 |
a0021c0012 | 0/0 | 1437 | 1 | 1 | 0 | 0 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | copy fasta | chr1 | 13065774 | 13082884 |
a0022c0025 | 0/0 | 1437 | 1 | 1 | 0 | 0 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | copy fasta | chr1 | 13065774 | 13082884 |
a0023c0027 | 0/0 | 1437 | 1 | 1 | 0 | 0 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | copy fasta | chr1 | 13065774 | 13082884 |
a0024c0028 | 0/0 | 1437 | 1 | 1 | 0 | 0 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | copy fasta | chr1 | 13065774 | 13082884 |
acthapid | grch38chm13v2 | tlen | total | AFR | AMR | EAS | EUR | SAS | regionname | genename | tseq | chr | start | end |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
a0001c0001t0001 | 0/0 | 1919 | 41 | 1 | 8 | 30 | 0 | 2 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | copy fasta | chr1 | 13065774 | 13082884 |
a0001c0001t0002 | 0/0 | 1919 | 1 | 1 | 0 | 0 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | copy fasta | chr1 | 13065774 | 13082884 |
a0001c0001t0006 | 0/0 | 1919 | 2 | 0 | 0 | 2 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | copy fasta | chr1 | 13065774 | 13082884 |
a0001c0001t0011 | 0/0 | 1919 | 1 | 1 | 0 | 0 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | copy fasta | chr1 | 13065774 | 13082884 |
a0001c0001t0012 | 0/0 | 1919 | 1 | 1 | 0 | 0 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | copy fasta | chr1 | 13065774 | 13082884 |
a0001c0008t0001 | 0/0 | 1919 | 2 | 0 | 2 | 0 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | copy fasta | chr1 | 13065774 | 13082884 |
a0001c0017t0001 | 0/0 | 1919 | 1 | 0 | 0 | 1 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | copy fasta | chr1 | 13065774 | 13082884 |
a0001c0018t0001 | 0/0 | 1919 | 1 | 0 | 0 | 0 | 0 | 1 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | copy fasta | chr1 | 13065774 | 13082884 |
a0002c0002t0001 | 0/0 | 1919 | 26 | 1 | 6 | 10 | 3 | 6 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | copy fasta | chr1 | 13065774 | 13082884 |
a0002c0002t0002 | 0/0 | 1919 | 8 | 3 | 0 | 5 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | copy fasta | chr1 | 13065774 | 13082884 |
a0002c0002t0005 | 0/0 | 1919 | 2 | 1 | 0 | 0 | 1 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | copy fasta | chr1 | 13065774 | 13082884 |
a0002c0002t0008 | 0/0 | 1785 | 2 | 1 | 1 | 0 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | copy fasta | chr1 | 13065774 | 13082884 |
a0002c0002t0010 | 0/0 | 1920 | 1 | 0 | 0 | 1 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | copy fasta | chr1 | 13065774 | 13082884 |
a0002c0002t0016 | 0/0 | 1919 | 1 | 0 | 0 | 0 | 0 | 1 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | copy fasta | chr1 | 13065774 | 13082884 |
a0003c0003t0001 | 0/0 | 1919 | 19 | 4 | 7 | 8 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | copy fasta | chr1 | 13065774 | 13082884 |
a0003c0003t0014 | 0/0 | 1919 | 1 | 0 | 0 | 1 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | copy fasta | chr1 | 13065774 | 13082884 |
a0004c0004t0003 | 0/0 | 1919 | 7 | 0 | 0 | 7 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | copy fasta | chr1 | 13065774 | 13082884 |
a0004c0004t0004 | 0/0 | 1919 | 5 | 0 | 4 | 1 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | copy fasta | chr1 | 13065774 | 13082884 |
a0004c0004t0009 | 0/0 | 1920 | 1 | 0 | 0 | 0 | 0 | 1 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | copy fasta | chr1 | 13065774 | 13082884 |
a0004c0010t0003 | 0/0 | 1919 | 2 | 0 | 0 | 2 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | copy fasta | chr1 | 13065774 | 13082884 |
a0005c0005t0002 | 0/0 | 1919 | 5 | 1 | 0 | 2 | 0 | 2 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | copy fasta | chr1 | 13065774 | 13082884 |
a0005c0005t0015 | 0/0 | 1919 | 1 | 1 | 0 | 0 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | copy fasta | chr1 | 13065774 | 13082884 |
a0006c0007t0002 | 0/0 | 1919 | 1 | 1 | 0 | 0 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | copy fasta | chr1 | 13065774 | 13082884 |
a0006c0007t0007 | 0/0 | 1919 | 2 | 2 | 0 | 0 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | copy fasta | chr1 | 13065774 | 13082884 |
a0006c0029t0002 | 0/0 | 1919 | 1 | 1 | 0 | 0 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | copy fasta | chr1 | 13065774 | 13082884 |
a0007c0006t0001 | 0/0 | 1919 | 3 | 0 | 0 | 3 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | copy fasta | chr1 | 13065774 | 13082884 |
a0008c0009t0001 | 0/0 | 1919 | 2 | 0 | 2 | 0 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | copy fasta | chr1 | 13065774 | 13082884 |
a0009c0026t0001 | 0/0 | 1919 | 1 | 0 | 0 | 1 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | copy fasta | chr1 | 13065774 | 13082884 |
a0010c0024t0002 | 0/0 | 1919 | 1 | 1 | 0 | 0 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | copy fasta | chr1 | 13065774 | 13082884 |
a0011c0023t0004 | 0/0 | 1919 | 1 | 0 | 0 | 1 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | copy fasta | chr1 | 13065774 | 13082884 |
a0012c0011t0013 | 0/0 | 1919 | 1 | 1 | 0 | 0 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | copy fasta | chr1 | 13065774 | 13082884 |
a0013c0013t0001 | 0/0 | 1919 | 1 | 0 | 0 | 1 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | copy fasta | chr1 | 13065774 | 13082884 |
a0014c0019t0001 | 0/0 | 1919 | 1 | 1 | 0 | 0 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | copy fasta | chr1 | 13065774 | 13082884 |
a0015c0014t0001 | 0/0 | 1919 | 1 | 0 | 0 | 1 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | copy fasta | chr1 | 13065774 | 13082884 |
a0016c0015t0003 | 0/0 | 1919 | 1 | 0 | 0 | 1 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | copy fasta | chr1 | 13065774 | 13082884 |
a0017c0016t0003 | 0/0 | 1902 | 1 | 0 | 0 | 1 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | copy fasta | chr1 | 13065774 | 13082884 |
a0018c0020t0003 | 0/0 | 1919 | 1 | 0 | 0 | 1 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | copy fasta | chr1 | 13065774 | 13082884 |
a0019c0021t0001 | 0/0 | 1919 | 1 | 0 | 0 | 0 | 0 | 1 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | copy fasta | chr1 | 13065774 | 13082884 |
a0020c0022t0002 | 0/0 | 1919 | 1 | 1 | 0 | 0 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | copy fasta | chr1 | 13065774 | 13082884 |
a0021c0012t0002 | 0/0 | 1919 | 1 | 1 | 0 | 0 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | copy fasta | chr1 | 13065774 | 13082884 |
a0022c0025t0005 | 0/0 | 1919 | 1 | 1 | 0 | 0 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | copy fasta | chr1 | 13065774 | 13082884 |
a0023c0027t0002 | 0/0 | 1919 | 1 | 1 | 0 | 0 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | copy fasta | chr1 | 13065774 | 13082884 |
a0024c0028t0002 | 0/0 | 1919 | 1 | 1 | 0 | 0 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | copy fasta | chr1 | 13065774 | 13082884 |
actghapid | grch38/chm13v2 1/0: The haplotype type is the same as GRCh380/1: The haplotype type is the same as CHM13v20/0: The haplotype type matches neither GRCh38 nor CHM13v21/1: The haplotype type is the same on both GRCh38 and CHM13v2
|
total | AFR | AMR | EAS | EUR | SAS | regionname | genename | chr | start | end |
---|---|---|---|---|---|---|---|---|---|---|---|---|
a0001c0001t0001g0001 | 0/0 | 17 | 0 | 3 | 13 | 0 | 1 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
a0001c0001t0001g0004 | 0/0 | 5 | 0 | 1 | 3 | 0 | 1 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
a0001c0001t0001g0006 | 0/0 | 3 | 0 | 0 | 3 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
a0001c0001t0001g0007 | 0/0 | 2 | 0 | 0 | 2 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
a0001c0001t0001g0012 | 0/0 | 2 | 0 | 1 | 1 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
a0001c0001t0001g0014 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
a0001c0001t0001g0015 | 0/0 | 2 | 0 | 0 | 2 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
a0001c0001t0001g0026 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
a0001c0001t0001g0035 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
a0001c0001t0001g0036 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
a0001c0001t0001g0040 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
a0001c0001t0001g0041 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
a0001c0001t0001g0042 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
a0001c0001t0001g0044 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
a0001c0001t0001g0046 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
a0001c0001t0001g0047 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
a0001c0001t0002g0072 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
a0001c0001t0006g0001 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
a0001c0001t0006g0004 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
a0001c0001t0011g0084 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
a0001c0001t0012g0071 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
a0001c0008t0001g0016 | 0/0 | 2 | 0 | 2 | 0 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
a0001c0017t0001g0007 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
a0001c0018t0001g0014 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
a0002c0002t0001g0002 | 0/0 | 4 | 0 | 1 | 2 | 1 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
a0002c0002t0001g0003 | 0/0 | 4 | 1 | 1 | 0 | 0 | 2 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
a0002c0002t0001g0005 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
a0002c0002t0001g0013 | 0/0 | 2 | 0 | 0 | 2 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
a0002c0002t0001g0024 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
a0002c0002t0001g0025 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
a0002c0002t0001g0027 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
a0002c0002t0001g0028 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
a0002c0002t0001g0029 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
a0002c0002t0001g0030 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
a0002c0002t0001g0031 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
a0002c0002t0001g0032 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
a0002c0002t0001g0033 | 0/0 | 1 | 0 | 0 | 0 | 1 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
a0002c0002t0001g0037 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
a0002c0002t0001g0038 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
a0002c0002t0001g0055 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
a0002c0002t0001g0056 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
a0002c0002t0001g0060 | 0/0 | 1 | 0 | 0 | 0 | 1 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
a0002c0002t0001g0086 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
a0002c0002t0002g0008 | 0/0 | 3 | 0 | 0 | 3 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
a0002c0002t0002g0022 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
a0002c0002t0002g0049 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
a0002c0002t0002g0051 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
a0002c0002t0002g0058 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
a0002c0002t0002g0061 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
a0002c0002t0005g0070 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
a0002c0002t0005g0081 | 0/0 | 1 | 0 | 0 | 0 | 1 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
a0002c0002t0008g0092 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
a0002c0002t0008g0093 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
a0002c0002t0010g0021 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
a0002c0002t0016g0050 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
a0003c0003t0001g0002 | 0/0 | 9 | 0 | 4 | 5 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
a0003c0003t0001g0005 | 0/0 | 2 | 1 | 0 | 1 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
a0003c0003t0001g0017 | 0/0 | 2 | 1 | 1 | 0 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
a0003c0003t0001g0053 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
a0003c0003t0001g0054 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
a0003c0003t0001g0057 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
a0003c0003t0001g0059 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
a0003c0003t0001g0077 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
a0003c0003t0001g0085 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
a0003c0003t0014g0005 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
a0004c0004t0003g0009 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
a0004c0004t0003g0062 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
a0004c0004t0003g0063 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
a0004c0004t0003g0065 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
a0004c0004t0003g0066 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
a0004c0004t0003g0075 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
a0004c0004t0003g0078 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
a0004c0004t0004g0009 | 0/0 | 2 | 0 | 2 | 0 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
a0004c0004t0004g0064 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
a0004c0004t0004g0067 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
a0004c0004t0004g0074 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
a0004c0004t0009g0069 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
a0004c0010t0003g0068 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
a0004c0010t0003g0076 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
a0005c0005t0002g0010 | 0/0 | 2 | 0 | 0 | 0 | 0 | 2 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
a0005c0005t0002g0087 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
a0005c0005t0002g0089 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
a0005c0005t0002g0090 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
a0005c0005t0015g0010 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
a0006c0007t0002g0083 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
a0006c0007t0007g0011 | 0/0 | 2 | 2 | 0 | 0 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
a0006c0029t0002g0020 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
a0007c0006t0001g0034 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
a0007c0006t0001g0039 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
a0007c0006t0001g0043 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
a0008c0009t0001g0003 | 0/0 | 2 | 0 | 2 | 0 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
a0009c0026t0001g0045 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
a0010c0024t0002g0091 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
a0011c0023t0004g0073 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
a0012c0011t0013g0079 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
a0013c0013t0001g0052 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
a0014c0019t0001g0002 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
a0015c0014t0001g0048 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
a0016c0015t0003g0018 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
a0017c0016t0003g0082 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
a0018c0020t0003g0018 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
a0019c0021t0001g0001 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
a0020c0022t0002g0023 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
a0021c0012t0002g0088 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
a0022c0025t0005g0080 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
a0023c0027t0002g0019 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
a0024c0028t0002g0019 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
sampleid | ID haplotypeid
|
ahapid | chapid | thapid | ghapid | gpopname | popname | regionname | genename | chr | start | end |
---|---|---|---|---|---|---|---|---|---|---|---|---|
HG00323 | hp1 | a0002 | c0002 | t0001 | g0060 | EUR | FIN | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
HG00323 | hp2 | a0002 | c0002 | t0005 | g0081 | EUR | FIN | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
HG00558 | hp1 | a0001 | c0001 | t0001 | g0015 | EAS | CHS | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
HG00558 | hp2 | a0001 | c0001 | t0001 | g0026 | EAS | CHS | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
HG00609 | hp1 | a0002 | c0002 | t0001 | g0086 | EAS | CHS | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
HG00609 | hp2 | a0001 | c0001 | t0001 | g0001 | EAS | CHS | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
HG00639 | hp1 | a0001 | c0001 | t0001 | g0040 | AMR | PUR | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
HG00639 | hp2 | a0002 | c0002 | t0001 | g0031 | AMR | PUR | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
HG01070 | hp1 | a0001 | c0008 | t0001 | g0016 | AMR | PUR | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
HG01070 | hp2 | a0002 | c0002 | t0008 | g0092 | AMR | PUR | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
HG01071 | hp1 | a0001 | c0008 | t0001 | g0016 | AMR | PUR | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
HG01071 | hp2 | a0002 | c0002 | t0001 | g0037 | AMR | PUR | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
HG01081 | hp1 | a0003 | c0003 | t0001 | g0059 | AMR | PUR | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
HG01081 | hp2 | a0001 | c0001 | t0001 | g0004 | AMR | PUR | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
HG01099 | hp1 | a0002 | c0002 | t0001 | g0030 | AMR | PUR | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
HG01099 | hp2 | a0003 | c0003 | t0001 | g0002 | AMR | PUR | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
HG01175 | hp1 | a0001 | c0001 | t0001 | g0001 | AMR | PUR | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
HG01175 | hp2 | a0002 | c0002 | t0001 | g0003 | AMR | PUR | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
HG01257 | hp1 | a0003 | c0003 | t0001 | g0002 | AMR | CLM | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
HG01257 | hp2 | a0008 | c0009 | t0001 | g0003 | AMR | CLM | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
HG01258 | hp1 | a0001 | c0001 | t0001 | g0014 | AMR | CLM | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
HG01258 | hp2 | a0008 | c0009 | t0001 | g0003 | AMR | CLM | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
HG01346 | hp1 | a0001 | c0001 | t0001 | g0047 | AMR | CLM | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
HG01346 | hp2 | a0003 | c0003 | t0001 | g0002 | AMR | CLM | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
HG01433 | hp1 | a0003 | c0003 | t0001 | g0002 | AMR | CLM | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
HG01433 | hp2 | a0003 | c0003 | t0001 | g0017 | AMR | CLM | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
HG01884 | hp1 | a0005 | c0005 | t0002 | g0090 | AFR | ACB | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
HG01884 | hp2 | a0006 | c0029 | t0002 | g0020 | AFR | ACB | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
HG01934 | hp1 | a0001 | c0001 | t0001 | g0001 | AMR | PEL | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
HG01934 | hp2 | a0002 | c0002 | t0001 | g0029 | AMR | PEL | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
HG01952 | hp1 | a0004 | c0004 | t0004 | g0064 | AMR | PEL | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
HG01952 | hp2 | a0002 | c0002 | t0001 | g0002 | AMR | PEL | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
HG01981 | hp1 | a0004 | c0004 | t0004 | g0067 | AMR | PEL | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
HG01981 | hp2 | a0004 | c0004 | t0004 | g0009 | AMR | PEL | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
HG02071 | hp1 | a0002 | c0002 | t0002 | g0008 | EAS | KHV | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
HG02071 | hp2 | a0004 | c0010 | t0003 | g0076 | EAS | KHV | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
HG02135 | hp1 | a0001 | c0001 | t0001 | g0004 | EAS | KHV | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
HG02135 | hp2 | a0002 | c0002 | t0002 | g0058 | EAS | KHV | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
HG02273 | hp1 | a0004 | c0004 | t0004 | g0009 | AMR | PEL | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
HG02273 | hp2 | a0003 | c0003 | t0001 | g0085 | AMR | PEL | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
HG02280 | hp1 | a0023 | c0027 | t0002 | g0019 | AFR | ACB | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
HG02280 | hp2 | a0021 | c0012 | t0002 | g0088 | AFR | ACB | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
HG02300 | hp1 | a0001 | c0001 | t0001 | g0001 | AMR | PEL | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
HG02300 | hp2 | a0001 | c0001 | t0001 | g0012 | AMR | PEL | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
HG02451 | hp1 | a0001 | c0001 | t0012 | g0071 | AFR | ACB | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
HG02451 | hp2 | a0001 | c0001 | t0002 | g0072 | AFR | ACB | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
HG02523 | hp1 | a0015 | c0014 | t0001 | g0048 | EAS | KHV | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
HG02523 | hp2 | a0004 | c0004 | t0003 | g0009 | EAS | KHV | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
HG02698 | hp1 | a0004 | c0004 | t0009 | g0069 | SAS | PJL | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
HG02698 | hp2 | a0005 | c0005 | t0002 | g0010 | SAS | PJL | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
HG02717 | hp1 | a0003 | c0003 | t0001 | g0005 | AFR | GWD | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
HG02717 | hp2 | a0002 | c0002 | t0002 | g0049 | AFR | GWD | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
HG02735 | hp1 | a0019 | c0021 | t0001 | g0001 | SAS | PJL | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
HG02735 | hp2 | a0002 | c0002 | t0001 | g0025 | SAS | PJL | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
HG02895 | hp1 | a0022 | c0025 | t0005 | g0080 | AFR | GWD | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
HG02895 | hp2 | a0012 | c0011 | t0013 | g0079 | AFR | GWD | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
HG03017 | hp1 | a0002 | c0002 | t0001 | g0055 | SAS | PJL | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
HG03017 | hp2 | a0005 | c0005 | t0002 | g0010 | SAS | PJL | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
HG03041 | hp1 | a0024 | c0028 | t0002 | g0019 | AFR | GWD | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
HG03041 | hp2 | a0006 | c0007 | t0007 | g0011 | AFR | GWD | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
HG03225 | hp1 | a0002 | c0002 | t0005 | g0070 | AFR | MSL | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
HG03225 | hp2 | a0020 | c0022 | t0002 | g0023 | AFR | MSL | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
HG03453 | hp1 | a0014 | c0019 | t0001 | g0002 | AFR | MSL | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
HG03453 | hp2 | a0010 | c0024 | t0002 | g0091 | AFR | MSL | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
HG03486 | hp1 | a0003 | c0003 | t0001 | g0057 | AFR | MSL | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
HG03486 | hp2 | a0006 | c0007 | t0007 | g0011 | AFR | MSL | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
HG03540 | hp1 | a0001 | c0001 | t0001 | g0046 | AFR | GWD | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
HG03540 | hp2 | a0002 | c0002 | t0001 | g0003 | AFR | GWD | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
HG03688 | hp1 | a0002 | c0002 | t0016 | g0050 | SAS | STU | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
HG03688 | hp2 | a0002 | c0002 | t0001 | g0028 | SAS | STU | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
HG03704 | hp1 | a0001 | c0001 | t0001 | g0004 | SAS | PJL | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
HG03704 | hp2 | a0002 | c0002 | t0001 | g0003 | SAS | PJL | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
HG03710 | hp1 | a0001 | c0018 | t0001 | g0014 | SAS | PJL | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
HG03710 | hp2 | a0002 | c0002 | t0001 | g0024 | SAS | PJL | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
HG04115 | hp1 | a0001 | c0001 | t0001 | g0001 | SAS | STU | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
HG04115 | hp2 | a0002 | c0002 | t0001 | g0003 | SAS | STU | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
NA18612 | hp1 | a0002 | c0002 | t0001 | g0002 | EAS | CHB | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
NA18612 | hp2 | a0004 | c0004 | t0003 | g0075 | EAS | CHB | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
NA18942 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
NA18942 | hp2 | a0011 | c0023 | t0004 | g0073 | EAS | JPT | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
NA18946 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
NA18946 | hp2 | a0017 | c0016 | t0003 | g0082 | EAS | JPT | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
NA18949 | hp1 | a0002 | c0002 | t0002 | g0008 | EAS | JPT | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
NA18949 | hp2 | a0002 | c0002 | t0001 | g0013 | EAS | JPT | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
NA18951 | hp1 | a0002 | c0002 | t0001 | g0002 | EAS | JPT | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
NA18951 | hp2 | a0002 | c0002 | t0002 | g0008 | EAS | JPT | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
NA18954 | hp1 | a0002 | c0002 | t0002 | g0061 | EAS | JPT | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
NA18954 | hp2 | a0003 | c0003 | t0001 | g0005 | EAS | JPT | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
NA18959 | hp1 | a0001 | c0001 | t0001 | g0007 | EAS | JPT | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
NA18959 | hp2 | a0001 | c0001 | t0001 | g0007 | EAS | JPT | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
NA18960 | hp1 | a0002 | c0002 | t0001 | g0013 | EAS | JPT | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
NA18960 | hp2 | a0002 | c0002 | t0001 | g0038 | EAS | JPT | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
NA18965 | hp1 | a0003 | c0003 | t0014 | g0005 | EAS | JPT | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
NA18965 | hp2 | a0001 | c0001 | t0001 | g0012 | EAS | JPT | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
NA18966 | hp1 | a0003 | c0003 | t0001 | g0002 | EAS | JPT | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
NA18966 | hp2 | a0004 | c0004 | t0003 | g0062 | EAS | JPT | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
NA18974 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
NA18974 | hp2 | a0001 | c0001 | t0001 | g0004 | EAS | JPT | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
NA18977 | hp1 | a0001 | c0001 | t0006 | g0004 | EAS | JPT | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
NA18977 | hp2 | a0002 | c0002 | t0010 | g0021 | EAS | JPT | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
NA18980 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
NA18980 | hp2 | a0002 | c0002 | t0001 | g0032 | EAS | JPT | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
NA18984 | hp1 | a0002 | c0002 | t0001 | g0056 | EAS | JPT | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
NA18984 | hp2 | a0001 | c0001 | t0001 | g0004 | EAS | JPT | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
NA18985 | hp1 | a0001 | c0001 | t0001 | g0035 | EAS | JPT | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
NA18985 | hp2 | a0001 | c0001 | t0001 | g0006 | EAS | JPT | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
NA18994 | hp1 | a0002 | c0002 | t0001 | g0005 | EAS | JPT | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
NA18994 | hp2 | a0004 | c0004 | t0004 | g0074 | EAS | JPT | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
NA18995 | hp1 | a0005 | c0005 | t0002 | g0087 | EAS | JPT | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
NA18995 | hp2 | a0016 | c0015 | t0003 | g0018 | EAS | JPT | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
NA18998 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
NA18998 | hp2 | a0004 | c0004 | t0003 | g0063 | EAS | JPT | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
NA19004 | hp1 | a0005 | c0005 | t0002 | g0089 | EAS | JPT | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
NA19004 | hp2 | a0001 | c0017 | t0001 | g0007 | EAS | JPT | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
NA19005 | hp1 | a0003 | c0003 | t0001 | g0002 | EAS | JPT | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
NA19005 | hp2 | a0004 | c0004 | t0003 | g0078 | EAS | JPT | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
NA19006 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
NA19006 | hp2 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
NA19011 | hp1 | a0003 | c0003 | t0001 | g0002 | EAS | JPT | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
NA19011 | hp2 | a0001 | c0001 | t0001 | g0006 | EAS | JPT | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
NA19030 | hp1 | a0006 | c0007 | t0002 | g0083 | AFR | LWK | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
NA19030 | hp2 | a0001 | c0001 | t0011 | g0084 | AFR | LWK | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
NA19054 | hp1 | a0003 | c0003 | t0001 | g0002 | EAS | JPT | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
NA19054 | hp2 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
NA19058 | hp1 | a0001 | c0001 | t0001 | g0044 | EAS | JPT | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
NA19058 | hp2 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
NA19063 | hp1 | a0001 | c0001 | t0006 | g0001 | EAS | JPT | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
NA19063 | hp2 | a0013 | c0013 | t0001 | g0052 | EAS | JPT | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
NA19065 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
NA19065 | hp2 | a0004 | c0010 | t0003 | g0068 | EAS | JPT | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
NA19067 | hp1 | a0018 | c0020 | t0003 | g0018 | EAS | JPT | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
NA19067 | hp2 | a0004 | c0004 | t0003 | g0066 | EAS | JPT | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
NA19068 | hp1 | a0002 | c0002 | t0001 | g0027 | EAS | JPT | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
NA19068 | hp2 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
NA19075 | hp1 | a0003 | c0003 | t0001 | g0054 | EAS | JPT | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
NA19075 | hp2 | a0001 | c0001 | t0001 | g0041 | EAS | JPT | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
NA19083 | hp1 | a0001 | c0001 | t0001 | g0042 | EAS | JPT | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
NA19083 | hp2 | a0001 | c0001 | t0001 | g0036 | EAS | JPT | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
NA19085 | hp1 | a0003 | c0003 | t0001 | g0077 | EAS | JPT | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
NA19085 | hp2 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
NA19086 | hp1 | a0007 | c0006 | t0001 | g0039 | EAS | JPT | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
NA19086 | hp2 | a0007 | c0006 | t0001 | g0034 | EAS | JPT | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
NA19089 | hp1 | a0009 | c0026 | t0001 | g0045 | EAS | JPT | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
NA19089 | hp2 | a0004 | c0004 | t0003 | g0065 | EAS | JPT | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
NA19090 | hp1 | a0007 | c0006 | t0001 | g0043 | EAS | JPT | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
NA19090 | hp2 | a0003 | c0003 | t0001 | g0002 | EAS | JPT | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
NA19091 | hp1 | a0001 | c0001 | t0001 | g0006 | EAS | JPT | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
NA19091 | hp2 | a0001 | c0001 | t0001 | g0015 | EAS | JPT | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
NA20129 | hp1 | a0005 | c0005 | t0015 | g0010 | AFR | ASW | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
NA20129 | hp2 | a0002 | c0002 | t0002 | g0022 | AFR | ASW | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
NA20752 | hp1 | a0002 | c0002 | t0001 | g0002 | EUR | TSI | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
NA20752 | hp2 | a0002 | c0002 | t0001 | g0033 | EUR | TSI | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
HG02109 | hp1 | a0003 | c0003 | t0001 | g0053 | AFR | ACB | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
HG02109 | hp2 | a0002 | c0002 | t0008 | g0093 | AFR | ACB | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
HG06807 | hp1 | a0003 | c0003 | t0001 | g0017 | AFR | USA | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
HG06807 | hp2 | a0002 | c0002 | t0002 | g0051 | AFR | USA | PRAMEF25_chr1_13065774_13082884 | PRAMEF25 | chr1 | 13065774 | 13082884 |
chr:pos | ref | alt | # # of ahapid:amino-acid(protein) level |
ahapids | # # of haplotypeids |
haplotypeids | annotation | impact | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length |
cds cds pos length |
aa aa pos length |
distance | status | chr | pos |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
chr1:13073709
|
C | T | 3 | a0006a0023a0024 | 6 | HG01884.hp2 HG02280.hp1 HG03041.hp1 others(3): Show |
missense_variant | MODERATE | c.16C>T | p.Arg6Trp | PRAMEF25 | ENSG00000229571.7 | transcript | ENST00000619661.3 | protein_coding | 2/4 | 166/1919 | 16/1437 | 6/478 | chr1 | 13073709 | ||
chr1:13073748
|
G | C | 3 | a0006a0023a0024 | 6 | HG01884.hp2 HG02280.hp1 HG03041.hp1 others(3): Show |
missense_variant | MODERATE | c.55G>C | p.Val19Leu | PRAMEF25 | ENSG00000229571.7 | transcript | ENST00000619661.3 | protein_coding | 2/4 | 205/1919 | 55/1437 | 19/478 | chr1 | 13073748 | ||
chr1:13073760
|
C | T | 1 | a0009 | 1 | NA19089.hp1 | stop_gained | HIGH | c.67C>T | p.Gln23* | PRAMEF25 | ENSG00000229571.7 | transcript | ENST00000619661.3 | protein_coding | 2/4 | 217/1919 | 67/1437 | 23/478 | chr1 | 13073760 | ||
chr1:13073770
|
C | T | 1 | a0022 | 1 | HG02895.hp1 | missense_variant | MODERATE | c.77C>T | p.Ala26Val | PRAMEF25 | ENSG00000229571.7 | transcript | ENST00000619661.3 | protein_coding | 2/4 | 227/1919 | 77/1437 | 26/478 | chr1 | 13073770 | ||
chr1:13073946
|
A | G | 1 | a0010 | 1 | HG03453.hp2 | missense_variant | MODERATE | c.253A>G | p.Asn85Asp | PRAMEF25 | ENSG00000229571.7 | transcript | ENST00000619661.3 | protein_coding | 2/4 | 403/1919 | 253/1437 | 85/478 | chr1 | 13073946 | ||
chr1:13074666
|
A | G | 1 | a0011 | 1 | NA18942.hp2 | missense_variant | MODERATE | c.301A>G | p.Lys101Glu | PRAMEF25 | ENSG00000229571.7 | transcript | ENST00000619661.3 | protein_coding | 3/4 | 451/1919 | 301/1437 | 101/478 | chr1 | 13074666 | ||
chr1:13074710
|
G | T | 1 | a0012 | 1 | HG02895.hp2 | missense_variant | MODERATE | c.345G>T | p.Trp115Cys | PRAMEF25 | ENSG00000229571.7 | transcript | ENST00000619661.3 | protein_coding | 3/4 | 495/1919 | 345/1437 | 115/478 | chr1 | 13074710 | ||
chr1:13074736
|
G | A | 2 | a0023a0024 | 2 | HG02280.hp1 HG03041.hp1 |
missense_variant | MODERATE | c.371G>A | p.Arg124His | PRAMEF25 | ENSG00000229571.7 | transcript | ENST00000619661.3 | protein_coding | 3/4 | 521/1919 | 371/1437 | 124/478 | chr1 | 13074736 | ||
chr1:13074741
|
T | G | 1 | a0020 | 1 | HG03225.hp2 | missense_variant | MODERATE | c.376T>G | p.Cys126Gly | PRAMEF25 | ENSG00000229571.7 | transcript | ENST00000619661.3 | protein_coding | 3/4 | 526/1919 | 376/1437 | 126/478 | chr1 | 13074741 | ||
chr1:13074742
|
G | A | 1 | a0020 | 1 | HG03225.hp2 | missense_variant | MODERATE | c.377G>A | p.Cys126Tyr | PRAMEF25 | ENSG00000229571.7 | transcript | ENST00000619661.3 | protein_coding | 3/4 | 527/1919 | 377/1437 | 126/478 | chr1 | 13074742 | ||
chr1:13074742
|
G | C | 3 | a0005a0010a0021 | 8 | HG01884.hp1 HG02280.hp2 HG02698.hp2 others(5): Show |
missense_variant | MODERATE | c.377G>C | p.Cys126Ser | PRAMEF25 | ENSG00000229571.7 | transcript | ENST00000619661.3 | protein_coding | 3/4 | 527/1919 | 377/1437 | 126/478 | chr1 | 13074742 | ||
chr1:13074769
|
A | C | 4 | a0005a0010a0019others(1): Show | 9 | HG01884.hp1 HG02280.hp2 HG02698.hp2 others(6): Show |
missense_variant | MODERATE | c.404A>C | p.Lys135Thr | PRAMEF25 | ENSG00000229571.7 | transcript | ENST00000619661.3 | protein_coding | 3/4 | 554/1919 | 404/1437 | 135/478 | chr1 | 13074769 | ||
chr1:13074858
|
C | T | 1 | a0008 | 2 | HG01257.hp2 HG01258.hp2 |
missense_variant | MODERATE | c.493C>T | p.His165Tyr | PRAMEF25 | ENSG00000229571.7 | transcript | ENST00000619661.3 | protein_coding | 3/4 | 643/1919 | 493/1437 | 165/478 | chr1 | 13074858 | ||
chr1:13074865
|
C | A | 1 | a0013 | 1 | NA19063.hp2 | missense_variant | MODERATE | c.500C>A | p.Thr167Asn | PRAMEF25 | ENSG00000229571.7 | transcript | ENST00000619661.3 | protein_coding | 3/4 | 650/1919 | 500/1437 | 167/478 | chr1 | 13074865 | ||
chr1:13074895
|
A | G | 1 | a0018 | 1 | NA19067.hp1 | missense_variant | MODERATE | c.530A>G | p.Lys177Arg | PRAMEF25 | ENSG00000229571.7 | transcript | ENST00000619661.3 | protein_coding | 3/4 | 680/1919 | 530/1437 | 177/478 | chr1 | 13074895 | ||
chr1:13075052
|
C | A | 1 | a0023 | 1 | HG02280.hp1 | stop_gained | HIGH | c.687C>A | p.Tyr229* | PRAMEF25 | ENSG00000229571.7 | transcript | ENST00000619661.3 | protein_coding | 3/4 | 837/1919 | 687/1437 | 229/478 | chr1 | 13075052 | ||
chr1:13075123
|
A | G | 1 | a0005 | 6 | HG01884.hp1 HG02698.hp2 HG03017.hp2 others(3): Show |
missense_variant | MODERATE | c.758A>G | p.Glu253Gly | PRAMEF25 | ENSG00000229571.7 | transcript | ENST00000619661.3 | protein_coding | 3/4 | 908/1919 | 758/1437 | 253/478 | chr1 | 13075123 | ||
chr1:13075173
|
C | T | 2 | a0003a0014 | 21 | HG01081.hp1 HG01099.hp2 HG01257.hp1 others(18): Show |
missense_variant | MODERATE | c.808C>T | p.His270Tyr | PRAMEF25 | ENSG00000229571.7 | transcript | ENST00000619661.3 | protein_coding | 3/4 | 958/1919 | 808/1437 | 270/478 | chr1 | 13075173 | ||
chr1:13075174
|
A | G | 9 | a0001a0003a0005others(6): Show | 84 | HG00558.hp1 HG00558.hp2 HG00609.hp2 others(81): Show |
missense_variant | MODERATE | c.809A>G | p.His270Arg | PRAMEF25 | ENSG00000229571.7 | transcript | ENST00000619661.3 | protein_coding | 3/4 | 959/1919 | 809/1437 | 270/478 | chr1 | 13075174 | ||
chr1:13075192
|
A | C | 7 | a0004a0011a0014others(4): Show | 21 | HG01952.hp1 HG01981.hp1 HG01981.hp2 others(18): Show |
missense_variant | MODERATE | c.827A>C | p.Tyr276Ser | PRAMEF25 | ENSG00000229571.7 | transcript | ENST00000619661.3 | protein_coding | 3/4 | 977/1919 | 827/1437 | 276/478 | chr1 | 13075192 | ||
chr1:13077092
|
A | G | 5 | a0004a0011a0016others(2): Show | 19 | HG01952.hp1 HG01981.hp1 HG01981.hp2 others(16): Show |
missense_variant | MODERATE | c.977A>G | p.Lys326Arg | PRAMEF25 | ENSG00000229571.7 | transcript | ENST00000619661.3 | protein_coding | 4/4 | 1127/1919 | 977/1437 | 326/478 | chr1 | 13077092 | ||
chr1:13077203
|
G | A | 1 | a0016 | 1 | NA18995.hp2 | missense_variant | MODERATE | c.1088G>A | p.Gly363Asp | PRAMEF25 | ENSG00000229571.7 | transcript | ENST00000619661.3 | protein_coding | 4/4 | 1238/1919 | 1088/1437 | 363/478 | chr1 | 13077203 | ||
chr1:13077248
|
G | A | 1 | a0007 | 3 | NA19086.hp1 NA19086.hp2 NA19090.hp1 |
missense_variant | MODERATE | c.1133G>A | p.Arg378His | PRAMEF25 | ENSG00000229571.7 | transcript | ENST00000619661.3 | protein_coding | 4/4 | 1283/1919 | 1133/1437 | 378/478 | chr1 | 13077248 | ||
chr1:13077370
|
CGGGAGAG others(10): Show |
C | 1 | a0017 | 1 | NA18946.hp2 | frameshift_variant | HIGH | c.1257_1273delGGAGAG others(11): Show |
p.Glu420fs | PRAMEF25 | ENSG00000229571.7 | transcript | ENST00000619661.3 | protein_coding | 4/4 | 1407/1919 | 1257/1437 | 419/478 | INFO_REALIGN_3_PRIME | chr1 | 13077370 |
chr:pos | ref | alt | # # of chapid |
chapids | # # of haplotypeids |
haplotypeids | annotation | impact | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length |
cds cds pos length |
aa aa pos length |
distance | status | chr | pos |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
chr1:13073735
|
G | T | 4 | a0006c0007a0006c0029a0023c0027others(1): Show | 6 | HG01884.hp2 HG02280.hp1 HG03041.hp1 others(3): Show |
synonymous_variant | LOW | c.42G>T | p.Leu14Leu | PRAMEF25 | ENSG00000229571.7 | transcript | ENST00000619661.3 | protein_coding | 2/4 | 192/1919 | 42/1437 | 14/478 | chr1 | 13073735 | ||
chr1:13073738
|
G | A | 4 | a0006c0007a0006c0029a0023c0027others(1): Show | 6 | HG01884.hp2 HG02280.hp1 HG03041.hp1 others(3): Show |
synonymous_variant | LOW | c.45G>A | p.Ala15Ala | PRAMEF25 | ENSG00000229571.7 | transcript | ENST00000619661.3 | protein_coding | 2/4 | 195/1919 | 45/1437 | 15/478 | chr1 | 13073738 | ||
chr1:13073753
|
G | A | 4 | a0006c0007a0006c0029a0023c0027others(1): Show | 6 | HG01884.hp2 HG02280.hp1 HG03041.hp1 others(3): Show |
synonymous_variant | LOW | c.60G>A | p.Leu20Leu | PRAMEF25 | ENSG00000229571.7 | transcript | ENST00000619661.3 | protein_coding | 2/4 | 210/1919 | 60/1437 | 20/478 | chr1 | 13073753 | ||
chr1:13073765
|
C | T | 4 | a0006c0007a0006c0029a0023c0027others(1): Show | 6 | HG01884.hp2 HG02280.hp1 HG03041.hp1 others(3): Show |
synonymous_variant | LOW | c.72C>T | p.Ala24Ala | PRAMEF25 | ENSG00000229571.7 | transcript | ENST00000619661.3 | protein_coding | 2/4 | 222/1919 | 72/1437 | 24/478 | chr1 | 13073765 | ||
chr1:13073957
|
T | C | 1 | a0012c0011 | 1 | HG02895.hp2 | synonymous_variant | LOW | c.264T>C | p.Asp88Asp | PRAMEF25 | ENSG00000229571.7 | transcript | ENST00000619661.3 | protein_coding | 2/4 | 414/1919 | 264/1437 | 88/478 | chr1 | 13073957 | ||
chr1:13073972
|
C | T | 1 | a0004c0010 | 2 | HG02071.hp2 NA19065.hp2 |
synonymous_variant | LOW | c.279C>T | p.His93His | PRAMEF25 | ENSG00000229571.7 | transcript | ENST00000619661.3 | protein_coding | 2/4 | 429/1919 | 279/1437 | 93/478 | chr1 | 13073972 | ||
chr1:13074740
|
G | T | 1 | a0020c0022 | 1 | HG03225.hp2 | synonymous_variant | LOW | c.375G>T | p.Gly125Gly | PRAMEF25 | ENSG00000229571.7 | transcript | ENST00000619661.3 | protein_coding | 3/4 | 525/1919 | 375/1437 | 125/478 | chr1 | 13074740 | ||
chr1:13075031
|
C | T | 1 | a0001c0008 | 2 | HG01070.hp1 HG01071.hp1 |
synonymous_variant | LOW | c.666C>T | p.Ile222Ile | PRAMEF25 | ENSG00000229571.7 | transcript | ENST00000619661.3 | protein_coding | 3/4 | 816/1919 | 666/1437 | 222/478 | chr1 | 13075031 | ||
chr1:13077184
|
C | T | 1 | a0001c0018 | 1 | HG03710.hp1 | synonymous_variant | LOW | c.1069C>T | p.Leu357Leu | PRAMEF25 | ENSG00000229571.7 | transcript | ENST00000619661.3 | protein_coding | 4/4 | 1219/1919 | 1069/1437 | 357/478 | chr1 | 13077184 | ||
chr1:13077213
|
C | T | 1 | a0016c0015 | 1 | NA18995.hp2 | synonymous_variant | LOW | c.1098C>T | p.Asp366Asp | PRAMEF25 | ENSG00000229571.7 | transcript | ENST00000619661.3 | protein_coding | 4/4 | 1248/1919 | 1098/1437 | 366/478 | chr1 | 13077213 | ||
chr1:13077369
|
A | G | 1 | a0001c0017 | 1 | NA19004.hp2 | synonymous_variant | LOW | c.1254A>G | p.Pro418Pro | PRAMEF25 | ENSG00000229571.7 | transcript | ENST00000619661.3 | protein_coding | 4/4 | 1404/1919 | 1254/1437 | 418/478 | chr1 | 13077369 | ||
chr1:13077447
|
T | G | 7 | a0004c0004a0004c0010a0010c0024others(4): Show | 20 | HG01952.hp1 HG01981.hp1 HG01981.hp2 others(17): Show |
synonymous_variant | LOW | c.1332T>G | p.Val444Val | PRAMEF25 | ENSG00000229571.7 | transcript | ENST00000619661.3 | protein_coding | 4/4 | 1482/1919 | 1332/1437 | 444/478 | chr1 | 13077447 | ||
chr1:13077511
|
A | C | 3 | a0006c0029a0023c0027a0024c0028 | 3 | HG01884.hp2 HG02280.hp1 HG03041.hp1 |
synonymous_variant | LOW | c.1396A>C | p.Arg466Arg | PRAMEF25 | ENSG00000229571.7 | transcript | ENST00000619661.3 | protein_coding | 4/4 | 1546/1919 | 1396/1437 | 466/478 | chr1 | 13077511 |
chr:pos | ref | alt | # # of thapid:transcript level |
thapids | # # of haplotypeids |
haplotypeids | annotation | impact | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length |
cds cds pos length |
aa aa pos length |
distance | status | chr | pos |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
chr1:13070796
|
C | G | 1 | a0002c0002t0016 | 1 | HG03688.hp1 | 5_prime_UTR_variant | MODIFIER | c.-128C>G | PRAMEF25 | ENSG00000229571.7 | transcript | ENST00000619661.3 | protein_coding | 1/4 | 2898 | chr1 | 13070796 | |||||
chr1:13070854
|
T | A | 1 | a0001c0001t0006 | 2 | NA18977.hp1 NA19063.hp1 |
5_prime_UTR_variant | MODIFIER | c.-70T>A | PRAMEF25 | ENSG00000229571.7 | transcript | ENST00000619661.3 | protein_coding | 1/4 | 2840 | chr1 | 13070854 | |||||
chr1:13070886
|
T | G | 1 | a0002c0002t0016 | 1 | HG03688.hp1 | 5_prime_UTR_variant | MODIFIER | c.-38T>G | PRAMEF25 | ENSG00000229571.7 | transcript | ENST00000619661.3 | protein_coding | 1/4 | 2808 | chr1 | 13070886 | |||||
chr1:13070891
|
A | C | 1 | a0005c0005t0015 | 1 | NA20129.hp1 | 5_prime_UTR_variant | MODIFIER | c.-33A>C | PRAMEF25 | ENSG00000229571.7 | transcript | ENST00000619661.3 | protein_coding | 1/4 | 2803 | chr1 | 13070891 | |||||
chr1:13077572
|
G | A | 1 | a0006c0007t0007 | 2 | HG03041.hp2 HG03486.hp2 |
3_prime_UTR_variant | MODIFIER | c.*20G>A | PRAMEF25 | ENSG00000229571.7 | transcript | ENST00000619661.3 | protein_coding | 4/4 | 20 | chr1 | 13077572 | |||||
chr1:13077579
|
C | CA | 2 | a0002c0002t0010a0004c0004t0009 | 2 | HG02698.hp1 NA18977.hp2 |
3_prime_UTR_variant | MODIFIER | c.*30dupA | PRAMEF25 | ENSG00000229571.7 | transcript | ENST00000619661.3 | protein_coding | 4/4 | 31 | INFO_REALIGN_3_PRIME | chr1 | 13077579 | ||||
chr1:13077666
|
G | A | 1 | a0001c0001t0011 | 1 | NA19030.hp2 | 3_prime_UTR_variant | MODIFIER | c.*114G>A | PRAMEF25 | ENSG00000229571.7 | transcript | ENST00000619661.3 | protein_coding | 4/4 | 114 | chr1 | 13077666 | |||||
chr1:13077689
|
T | A | 8 | a0004c0004t0003a0004c0004t0004a0004c0004t0009others(5): Show | 19 | HG01952.hp1 HG01981.hp1 HG01981.hp2 others(16): Show |
3_prime_UTR_variant | MODIFIER | c.*137T>A | PRAMEF25 | ENSG00000229571.7 | transcript | ENST00000619661.3 | protein_coding | 4/4 | 137 | chr1 | 13077689 | |||||
chr1:13077708
|
G | A | 1 | a0001c0001t0012 | 1 | HG02451.hp1 | 3_prime_UTR_variant | MODIFIER | c.*156G>A | PRAMEF25 | ENSG00000229571.7 | transcript | ENST00000619661.3 | protein_coding | 4/4 | 156 | chr1 | 13077708 | |||||
chr1:13077751
|
A | G | 17 | a0001c0001t0001a0001c0001t0006a0001c0001t0012others(14): Show | 106 | HG00323.hp1 HG00558.hp1 HG00558.hp2 others(103): Show |
3_prime_UTR_variant | MODIFIER | c.*199A>G | PRAMEF25 | ENSG00000229571.7 | transcript | ENST00000619661.3 | protein_coding | 4/4 | 199 | chr1 | 13077751 | |||||
chr1:13077754
|
G | C | 19 | a0001c0001t0001a0001c0001t0006a0001c0001t0012others(16): Show | 112 | HG00323.hp1 HG00558.hp1 HG00558.hp2 others(109): Show |
3_prime_UTR_variant | MODIFIER | c.*202G>C | PRAMEF25 | ENSG00000229571.7 | transcript | ENST00000619661.3 | protein_coding | 4/4 | 202 | chr1 | 13077754 | |||||
chr1:13077824
|
G | A | 2 | a0002c0002t0005a0022c0025t0005 | 3 | HG00323.hp2 HG02895.hp1 HG03225.hp1 |
3_prime_UTR_variant | MODIFIER | c.*272G>A | PRAMEF25 | ENSG00000229571.7 | transcript | ENST00000619661.3 | protein_coding | 4/4 | 272 | chr1 | 13077824 | |||||
chr1:13077827
|
G | A | 1 | a0003c0003t0014 | 1 | NA18965.hp1 | 3_prime_UTR_variant | MODIFIER | c.*275G>A | PRAMEF25 | ENSG00000229571.7 | transcript | ENST00000619661.3 | protein_coding | 4/4 | 275 | chr1 | 13077827 | |||||
chr1:13077853
|
G | T | 1 | a0012c0011t0013 | 1 | HG02895.hp2 | 3_prime_UTR_variant | MODIFIER | c.*301G>T | PRAMEF25 | ENSG00000229571.7 | transcript | ENST00000619661.3 | protein_coding | 4/4 | 301 | chr1 | 13077853 | |||||
chr1:13077858
|
A | C | 1 | a0005c0005t0015 | 1 | NA20129.hp1 | 3_prime_UTR_variant | MODIFIER | c.*306A>C | PRAMEF25 | ENSG00000229571.7 | transcript | ENST00000619661.3 | protein_coding | 4/4 | 306 | chr1 | 13077858 |
chr:pos | ref | alt | # # of ghapid:genebody level |
ghapids | # # of haplotypeids |
haplotypeids | annotation | impact | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | genebody_biotype | rank | cdna cdna pos length |
cds cds pos length |
aa aa pos length |
distance | status | chr | pos |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
chr1:13070942
|
T | A | 2 | a0006c0007t0007g0011a0006c0029t0002g0020 | 3 | HG01884.hp2 HG03041.hp2 HG03486.hp2 |
intron_variant | MODIFIER | c.-17+35T>A | PRAMEF25 | ENSG00000229571.7 | transcript | ENST00000619661.3 | protein_coding | 1/3 | chr1 | 13070942 | ||||||
chr1:13070949
|
C | T | 7 | a0005c0005t0002g0010a0005c0005t0002g0087a0005c0005t0002g0089others(4): Show | 8 | HG01884.hp1 HG02280.hp2 HG02698.hp2 others(5): Show |
intron_variant | MODIFIER | c.-17+42C>T | PRAMEF25 | ENSG00000229571.7 | transcript | ENST00000619661.3 | protein_coding | 1/3 | chr1 | 13070949 | ||||||
chr1:13071010
|
CT | C | 45 | a0001c0001t0001g0001a0001c0001t0001g0004a0001c0001t0001g0006others(42): Show | 76 | HG00558.hp1 HG00558.hp2 HG00609.hp2 others(73): Show |
intron_variant | MODIFIER | c.-17+114delT | PRAMEF25 | ENSG00000229571.7 | transcript | ENST00000619661.3 | protein_coding | 1/3 | INFO_REALIGN_3_PRIME | chr1 | 13071010 | |||||
chr1:13071028
|
A | C | 1 | a0002c0002t0002g0049 | 1 | HG02717.hp2 | intron_variant | MODIFIER | c.-17+121A>C | PRAMEF25 | ENSG00000229571.7 | transcript | ENST00000619661.3 | protein_coding | 1/3 | chr1 | 13071028 | ||||||
chr1:13071063
|
C | G | 24 | a0001c0001t0001g0001a0001c0001t0001g0004a0001c0001t0001g0007others(21): Show | 48 | HG00558.hp1 HG00609.hp2 HG00639.hp1 others(45): Show |
intron_variant | MODIFIER | c.-17+156C>G | PRAMEF25 | ENSG00000229571.7 | transcript | ENST00000619661.3 | protein_coding | 1/3 | chr1 | 13071063 | ||||||
chr1:13071206
|
T | G | 7 | a0002c0002t0002g0051a0002c0002t0016g0050a0005c0005t0002g0010others(4): Show | 8 | HG02280.hp2 HG02698.hp2 HG03017.hp2 others(5): Show |
intron_variant | MODIFIER | c.-17+299T>G | PRAMEF25 | ENSG00000229571.7 | transcript | ENST00000619661.3 | protein_coding | 1/3 | chr1 | 13071206 | ||||||
chr1:13071248
|
G | GT | 10 | a0001c0001t0001g0036a0002c0002t0001g0086a0002c0002t0002g0051others(7): Show | 11 | HG00609.hp1 HG01884.hp1 HG02280.hp2 others(8): Show |
intron_variant | MODIFIER | c.-17+354dupT | PRAMEF25 | ENSG00000229571.7 | transcript | ENST00000619661.3 | protein_coding | 1/3 | INFO_REALIGN_3_PRIME | chr1 | 13071248 | |||||
chr1:13071282
|
G | A | 23 | a0001c0001t0001g0012a0001c0001t0001g0026a0001c0001t0001g0036others(20): Show | 29 | HG00558.hp2 HG00609.hp1 HG00639.hp2 others(26): Show |
intron_variant | MODIFIER | c.-17+375G>A | PRAMEF25 | ENSG00000229571.7 | transcript | ENST00000619661.3 | protein_coding | 1/3 | chr1 | 13071282 | ||||||
chr1:13071301
|
A | G | 1 | a0002c0002t0001g0086 | 1 | HG00609.hp1 | intron_variant | MODIFIER | c.-17+394A>G | PRAMEF25 | ENSG00000229571.7 | transcript | ENST00000619661.3 | protein_coding | 1/3 | chr1 | 13071301 | ||||||
chr1:13071363
|
G | T | 24 | a0001c0001t0001g0001a0001c0001t0001g0004a0001c0001t0001g0006others(21): Show | 49 | HG00558.hp1 HG00609.hp2 HG00639.hp1 others(46): Show |
intron_variant | MODIFIER | c.-17+456G>T | PRAMEF25 | ENSG00000229571.7 | transcript | ENST00000619661.3 | protein_coding | 1/3 | chr1 | 13071363 | ||||||
chr1:13071368
|
A | G | 24 | a0001c0001t0001g0012a0001c0001t0001g0026a0001c0001t0001g0036others(21): Show | 30 | HG00558.hp2 HG00609.hp1 HG00639.hp2 others(27): Show |
intron_variant | MODIFIER | c.-17+461A>G | PRAMEF25 | ENSG00000229571.7 | transcript | ENST00000619661.3 | protein_coding | 1/3 | chr1 | 13071368 | ||||||
chr1:13071479
|
C | T | 2 | a0023c0027t0002g0019a0024c0028t0002g0019 | 2 | HG02280.hp1 HG03041.hp1 |
intron_variant | MODIFIER | c.-17+572C>T | PRAMEF25 | ENSG00000229571.7 | transcript | ENST00000619661.3 | protein_coding | 1/3 | chr1 | 13071479 | ||||||
chr1:13071541
|
C | T | 18 | a0001c0001t0001g0012a0001c0001t0001g0026a0001c0001t0001g0036others(15): Show | 24 | HG00558.hp2 HG00609.hp1 HG00639.hp2 others(21): Show |
intron_variant | MODIFIER | c.-17+634C>T | PRAMEF25 | ENSG00000229571.7 | transcript | ENST00000619661.3 | protein_coding | 1/3 | chr1 | 13071541 | ||||||
chr1:13071552
|
C | T | 22 | a0001c0001t0001g0001a0001c0001t0001g0004a0001c0001t0001g0006others(19): Show | 47 | HG00558.hp1 HG00609.hp2 HG00639.hp1 others(44): Show |
intron_variant | MODIFIER | c.-17+645C>T | PRAMEF25 | ENSG00000229571.7 | transcript | ENST00000619661.3 | protein_coding | 1/3 | chr1 | 13071552 | ||||||
chr1:13071561
|
C | CTT | 36 | a0001c0001t0001g0001a0001c0001t0001g0004a0001c0001t0001g0006others(33): Show | 61 | HG00558.hp1 HG00609.hp2 HG01070.hp1 others(58): Show |
intron_variant | MODIFIER | c.-17+665_-17+666dup others(2): Show |
PRAMEF25 | ENSG00000229571.7 | transcript | ENST00000619661.3 | protein_coding | 1/3 | INFO_REALIGN_3_PRIME | chr1 | 13071561 | |||||
chr1:13071561
|
C | CTTT | 41 | a0001c0001t0001g0012a0001c0001t0001g0026a0001c0001t0001g0036others(38): Show | 49 | HG00323.hp2 HG00558.hp2 HG00609.hp1 others(46): Show |
intron_variant | MODIFIER | c.-17+664_-17+666dup others(3): Show |
PRAMEF25 | ENSG00000229571.7 | transcript | ENST00000619661.3 | protein_coding | 1/3 | INFO_REALIGN_3_PRIME | chr1 | 13071561 | |||||
chr1:13071561
|
C | CTTTTTT | 5 | a0005c0005t0002g0010a0005c0005t0002g0089a0005c0005t0015g0010others(2): Show | 6 | HG02280.hp2 HG02698.hp2 HG03017.hp2 others(3): Show |
intron_variant | MODIFIER | c.-17+661_-17+666dup others(6): Show |
PRAMEF25 | ENSG00000229571.7 | transcript | ENST00000619661.3 | protein_coding | 1/3 | INFO_REALIGN_3_PRIME | chr1 | 13071561 | |||||
chr1:13071574
|
A | T | 1 | a0020c0022t0002g0023 | 1 | HG03225.hp2 | intron_variant | MODIFIER | c.-17+667A>T | PRAMEF25 | ENSG00000229571.7 | transcript | ENST00000619661.3 | protein_coding | 1/3 | chr1 | 13071574 | ||||||
chr1:13071582
|
A | G | 84 | a0001c0001t0001g0001a0001c0001t0001g0004a0001c0001t0001g0006others(81): Show | 118 | HG00323.hp2 HG00558.hp1 HG00558.hp2 others(115): Show |
intron_variant | MODIFIER | c.-17+675A>G | PRAMEF25 | ENSG00000229571.7 | transcript | ENST00000619661.3 | protein_coding | 1/3 | chr1 | 13071582 | ||||||
chr1:13071582
|
A | T | 2 | a0023c0027t0002g0019a0024c0028t0002g0019 | 2 | HG02280.hp1 HG03041.hp1 |
intron_variant | MODIFIER | c.-17+675A>T | PRAMEF25 | ENSG00000229571.7 | transcript | ENST00000619661.3 | protein_coding | 1/3 | chr1 | 13071582 | ||||||
chr1:13071607
|
C | G | 1 | a0002c0002t0001g0032 | 1 | NA18980.hp2 | intron_variant | MODIFIER | c.-17+700C>G | PRAMEF25 | ENSG00000229571.7 | transcript | ENST00000619661.3 | protein_coding | 1/3 | chr1 | 13071607 | ||||||
chr1:13071780
|
G | C | 19 | a0002c0002t0016g0050a0003c0003t0001g0077a0004c0004t0003g0009others(16): Show | 20 | HG01952.hp1 HG01981.hp1 HG01981.hp2 others(17): Show |
intron_variant | MODIFIER | c.-17+873G>C | PRAMEF25 | ENSG00000229571.7 | transcript | ENST00000619661.3 | protein_coding | 1/3 | chr1 | 13071780 | ||||||
chr1:13071848
|
G | T | 1 | a0002c0002t0016g0050 | 1 | HG03688.hp1 | intron_variant | MODIFIER | c.-17+941G>T | PRAMEF25 | ENSG00000229571.7 | transcript | ENST00000619661.3 | protein_coding | 1/3 | chr1 | 13071848 | ||||||
chr1:13071967
|
A | G | 1 | a0002c0002t0016g0050 | 1 | HG03688.hp1 | intron_variant | MODIFIER | c.-17+1060A>G | PRAMEF25 | ENSG00000229571.7 | transcript | ENST00000619661.3 | protein_coding | 1/3 | chr1 | 13071967 | ||||||
chr1:13071968
|
G | A | 1 | a0002c0002t0016g0050 | 1 | HG03688.hp1 | intron_variant | MODIFIER | c.-17+1061G>A | PRAMEF25 | ENSG00000229571.7 | transcript | ENST00000619661.3 | protein_coding | 1/3 | chr1 | 13071968 | ||||||
chr1:13072033
|
T | A | 1 | a0002c0002t0016g0050 | 1 | HG03688.hp1 | intron_variant | MODIFIER | c.-17+1126T>A | PRAMEF25 | ENSG00000229571.7 | transcript | ENST00000619661.3 | protein_coding | 1/3 | chr1 | 13072033 | ||||||
chr1:13072046
|
T | G | 2 | a0006c0007t0007g0011a0006c0029t0002g0020 | 3 | HG01884.hp2 HG03041.hp2 HG03486.hp2 |
intron_variant | MODIFIER | c.-17+1139T>G | PRAMEF25 | ENSG00000229571.7 | transcript | ENST00000619661.3 | protein_coding | 1/3 | chr1 | 13072046 | ||||||
chr1:13072093
|
G | A | 4 | a0002c0002t0005g0070a0002c0002t0005g0081a0012c0011t0013g0079others(1): Show | 4 | HG00323.hp2 HG02895.hp1 HG02895.hp2 others(1): Show |
intron_variant | MODIFIER | c.-17+1186G>A | PRAMEF25 | ENSG00000229571.7 | transcript | ENST00000619661.3 | protein_coding | 1/3 | chr1 | 13072093 | ||||||
chr1:13072186
|
T | G | 1 | a0020c0022t0002g0023 | 1 | HG03225.hp2 | intron_variant | MODIFIER | c.-17+1279T>G | PRAMEF25 | ENSG00000229571.7 | transcript | ENST00000619661.3 | protein_coding | 1/3 | chr1 | 13072186 | ||||||
chr1:13072381
|
CTCTG | C | 81 | a0001c0001t0001g0006a0001c0001t0001g0012a0001c0001t0001g0026others(78): Show | 107 | HG00323.hp1 HG00323.hp2 HG00558.hp2 others(104): Show |
intron_variant | MODIFIER | c.-16-1293_-16-1290d others(6): Show |
PRAMEF25 | ENSG00000229571.7 | transcript | ENST00000619661.3 | protein_coding | 1/3 | INFO_REALIGN_3_PRIME | chr1 | 13072381 | |||||
chr1:13072385
|
G | C | 1 | a0002c0002t0016g0050 | 1 | HG03688.hp1 | intron_variant | MODIFIER | c.-16-1293G>C | PRAMEF25 | ENSG00000229571.7 | transcript | ENST00000619661.3 | protein_coding | 1/3 | chr1 | 13072385 | ||||||
chr1:13072447
|
C | T | 2 | a0004c0004t0003g0062a0004c0004t0003g0078 | 2 | NA18966.hp2 NA19005.hp2 |
intron_variant | MODIFIER | c.-16-1231C>T | PRAMEF25 | ENSG00000229571.7 | transcript | ENST00000619661.3 | protein_coding | 1/3 | chr1 | 13072447 | ||||||
chr1:13072647
|
G | A | 1 | a0002c0002t0005g0070 | 1 | HG03225.hp1 | intron_variant | MODIFIER | c.-16-1031G>A | PRAMEF25 | ENSG00000229571.7 | transcript | ENST00000619661.3 | protein_coding | 1/3 | chr1 | 13072647 | ||||||
chr1:13072670
|
A | G | 7 | a0005c0005t0002g0010a0005c0005t0002g0087a0005c0005t0002g0089others(4): Show | 8 | HG01884.hp1 HG02280.hp2 HG02698.hp2 others(5): Show |
intron_variant | MODIFIER | c.-16-1008A>G | PRAMEF25 | ENSG00000229571.7 | transcript | ENST00000619661.3 | protein_coding | 1/3 | chr1 | 13072670 | ||||||
chr1:13072835
|
G | T | 1 | a0001c0001t0011g0084 | 1 | NA19030.hp2 | intron_variant | MODIFIER | c.-16-843G>T | PRAMEF25 | ENSG00000229571.7 | transcript | ENST00000619661.3 | protein_coding | 1/3 | chr1 | 13072835 | ||||||
chr1:13072932
|
T | C | 7 | a0005c0005t0002g0010a0005c0005t0002g0087a0005c0005t0002g0089others(4): Show | 8 | HG01884.hp1 HG02280.hp2 HG02698.hp2 others(5): Show |
intron_variant | MODIFIER | c.-16-746T>C | PRAMEF25 | ENSG00000229571.7 | transcript | ENST00000619661.3 | protein_coding | 1/3 | chr1 | 13072932 | ||||||
chr1:13073036
|
C | A | 2 | a0001c0001t0001g0014a0001c0018t0001g0014 | 2 | HG01258.hp1 HG03710.hp1 |
intron_variant | MODIFIER | c.-16-642C>A | PRAMEF25 | ENSG00000229571.7 | transcript | ENST00000619661.3 | protein_coding | 1/3 | chr1 | 13073036 | ||||||
chr1:13073116
|
T | G | 83 | a0001c0001t0001g0006a0001c0001t0001g0012a0001c0001t0001g0026others(80): Show | 109 | HG00323.hp2 HG00558.hp2 HG00609.hp1 others(106): Show |
intron_variant | MODIFIER | c.-16-562T>G | PRAMEF25 | ENSG00000229571.7 | transcript | ENST00000619661.3 | protein_coding | 1/3 | chr1 | 13073116 | ||||||
chr1:13073160
|
GAAGA | G | 24 | a0001c0001t0002g0072a0001c0001t0011g0084a0001c0001t0012g0071others(21): Show | 39 | HG01081.hp1 HG01099.hp2 HG01257.hp1 others(36): Show |
intron_variant | MODIFIER | c.-16-508_-16-505del others(4): Show |
PRAMEF25 | ENSG00000229571.7 | transcript | ENST00000619661.3 | protein_coding | 1/3 | INFO_REALIGN_3_PRIME | chr1 | 13073160 | |||||
chr1:13073178
|
G | A | 1 | a0002c0002t0002g0051 | 1 | HG06807.hp2 | intron_variant | MODIFIER | c.-16-500G>A | PRAMEF25 | ENSG00000229571.7 | transcript | ENST00000619661.3 | protein_coding | 1/3 | chr1 | 13073178 | ||||||
chr1:13073200
|
G | GAAGA | 3 | a0006c0007t0002g0083a0023c0027t0002g0019a0024c0028t0002g0019 | 3 | HG02280.hp1 HG03041.hp1 NA19030.hp1 |
intron_variant | MODIFIER | c.-16-477_-16-474dup others(4): Show |
PRAMEF25 | ENSG00000229571.7 | transcript | ENST00000619661.3 | protein_coding | 1/3 | INFO_REALIGN_3_PRIME | chr1 | 13073200 | |||||
chr1:13073218
|
G | A | 3 | a0006c0007t0002g0083a0023c0027t0002g0019a0024c0028t0002g0019 | 3 | HG02280.hp1 HG03041.hp1 NA19030.hp1 |
intron_variant | MODIFIER | c.-16-460G>A | PRAMEF25 | ENSG00000229571.7 | transcript | ENST00000619661.3 | protein_coding | 1/3 | chr1 | 13073218 | ||||||
chr1:13073220
|
A | C | 3 | a0006c0007t0002g0083a0023c0027t0002g0019a0024c0028t0002g0019 | 3 | HG02280.hp1 HG03041.hp1 NA19030.hp1 |
intron_variant | MODIFIER | c.-16-458A>C | PRAMEF25 | ENSG00000229571.7 | transcript | ENST00000619661.3 | protein_coding | 1/3 | chr1 | 13073220 | ||||||
chr1:13073223
|
C | G | 3 | a0006c0007t0002g0083a0023c0027t0002g0019a0024c0028t0002g0019 | 3 | HG02280.hp1 HG03041.hp1 NA19030.hp1 |
intron_variant | MODIFIER | c.-16-455C>G | PRAMEF25 | ENSG00000229571.7 | transcript | ENST00000619661.3 | protein_coding | 1/3 | chr1 | 13073223 | ||||||
chr1:13073233
|
A | T | 3 | a0006c0007t0002g0083a0023c0027t0002g0019a0024c0028t0002g0019 | 3 | HG02280.hp1 HG03041.hp1 NA19030.hp1 |
intron_variant | MODIFIER | c.-16-445A>T | PRAMEF25 | ENSG00000229571.7 | transcript | ENST00000619661.3 | protein_coding | 1/3 | chr1 | 13073233 | ||||||
chr1:13073250
|
G | C | 2 | a0006c0007t0007g0011a0006c0029t0002g0020 | 3 | HG01884.hp2 HG03041.hp2 HG03486.hp2 |
intron_variant | MODIFIER | c.-16-428G>C | PRAMEF25 | ENSG00000229571.7 | transcript | ENST00000619661.3 | protein_coding | 1/3 | chr1 | 13073250 | ||||||
chr1:13073310
|
T | A | 5 | a0004c0004t0003g0063a0006c0007t0002g0083a0017c0016t0003g0082others(2): Show | 5 | HG02280.hp1 HG03041.hp1 NA18946.hp2 others(2): Show |
intron_variant | MODIFIER | c.-16-368T>A | PRAMEF25 | ENSG00000229571.7 | transcript | ENST00000619661.3 | protein_coding | 1/3 | chr1 | 13073310 | ||||||
chr1:13073334
|
C | T | 3 | a0006c0007t0002g0083a0023c0027t0002g0019a0024c0028t0002g0019 | 3 | HG02280.hp1 HG03041.hp1 NA19030.hp1 |
intron_variant | MODIFIER | c.-16-344C>T | PRAMEF25 | ENSG00000229571.7 | transcript | ENST00000619661.3 | protein_coding | 1/3 | chr1 | 13073334 | ||||||
chr1:13073339
|
T | A | 3 | a0006c0007t0002g0083a0023c0027t0002g0019a0024c0028t0002g0019 | 3 | HG02280.hp1 HG03041.hp1 NA19030.hp1 |
intron_variant | MODIFIER | c.-16-339T>A | PRAMEF25 | ENSG00000229571.7 | transcript | ENST00000619661.3 | protein_coding | 1/3 | chr1 | 13073339 | ||||||
chr1:13073347
|
T | C | 1 | a0002c0002t0001g0024 | 1 | HG03710.hp2 | intron_variant | MODIFIER | c.-16-331T>C | PRAMEF25 | ENSG00000229571.7 | transcript | ENST00000619661.3 | protein_coding | 1/3 | chr1 | 13073347 | ||||||
chr1:13073373
|
A | G | 3 | a0006c0007t0002g0083a0023c0027t0002g0019a0024c0028t0002g0019 | 3 | HG02280.hp1 HG03041.hp1 NA19030.hp1 |
intron_variant | MODIFIER | c.-16-305A>G | PRAMEF25 | ENSG00000229571.7 | transcript | ENST00000619661.3 | protein_coding | 1/3 | chr1 | 13073373 | ||||||
chr1:13073388
|
C | A | 4 | a0002c0002t0001g0037a0006c0007t0002g0083a0023c0027t0002g0019others(1): Show | 4 | HG01071.hp2 HG02280.hp1 HG03041.hp1 others(1): Show |
intron_variant | MODIFIER | c.-16-290C>A | PRAMEF25 | ENSG00000229571.7 | transcript | ENST00000619661.3 | protein_coding | 1/3 | chr1 | 13073388 | ||||||
chr1:13073398
|
T | C | 3 | a0006c0007t0002g0083a0023c0027t0002g0019a0024c0028t0002g0019 | 3 | HG02280.hp1 HG03041.hp1 NA19030.hp1 |
intron_variant | MODIFIER | c.-16-280T>C | PRAMEF25 | ENSG00000229571.7 | transcript | ENST00000619661.3 | protein_coding | 1/3 | chr1 | 13073398 | ||||||
chr1:13073399
|
G | A | 3 | a0006c0007t0002g0083a0023c0027t0002g0019a0024c0028t0002g0019 | 3 | HG02280.hp1 HG03041.hp1 NA19030.hp1 |
intron_variant | MODIFIER | c.-16-279G>A | PRAMEF25 | ENSG00000229571.7 | transcript | ENST00000619661.3 | protein_coding | 1/3 | chr1 | 13073399 | ||||||
chr1:13073407
|
G | C | 5 | a0002c0002t0005g0070a0002c0002t0005g0081a0002c0002t0008g0092others(2): Show | 5 | HG00323.hp2 HG01070.hp2 HG02895.hp1 others(2): Show |
intron_variant | MODIFIER | c.-16-271G>C | PRAMEF25 | ENSG00000229571.7 | transcript | ENST00000619661.3 | protein_coding | 1/3 | chr1 | 13073407 | ||||||
chr1:13073443
|
G | A | 3 | a0006c0007t0002g0083a0023c0027t0002g0019a0024c0028t0002g0019 | 3 | HG02280.hp1 HG03041.hp1 NA19030.hp1 |
intron_variant | MODIFIER | c.-16-235G>A | PRAMEF25 | ENSG00000229571.7 | transcript | ENST00000619661.3 | protein_coding | 1/3 | chr1 | 13073443 | ||||||
chr1:13073459
|
C | T | 2 | a0006c0007t0007g0011a0006c0029t0002g0020 | 3 | HG01884.hp2 HG03041.hp2 HG03486.hp2 |
intron_variant | MODIFIER | c.-16-219C>T | PRAMEF25 | ENSG00000229571.7 | transcript | ENST00000619661.3 | protein_coding | 1/3 | chr1 | 13073459 | ||||||
chr1:13073461
|
A | C | 3 | a0006c0007t0002g0083a0023c0027t0002g0019a0024c0028t0002g0019 | 3 | HG02280.hp1 HG03041.hp1 NA19030.hp1 |
intron_variant | MODIFIER | c.-16-217A>C | PRAMEF25 | ENSG00000229571.7 | transcript | ENST00000619661.3 | protein_coding | 1/3 | chr1 | 13073461 | ||||||
chr1:13073464
|
T | G | 3 | a0006c0007t0002g0083a0023c0027t0002g0019a0024c0028t0002g0019 | 3 | HG02280.hp1 HG03041.hp1 NA19030.hp1 |
intron_variant | MODIFIER | c.-16-214T>G | PRAMEF25 | ENSG00000229571.7 | transcript | ENST00000619661.3 | protein_coding | 1/3 | chr1 | 13073464 | ||||||
chr1:13073471
|
C | T | 1 | a0001c0001t0011g0084 | 1 | NA19030.hp2 | intron_variant | MODIFIER | c.-16-207C>T | PRAMEF25 | ENSG00000229571.7 | transcript | ENST00000619661.3 | protein_coding | 1/3 | chr1 | 13073471 | ||||||
chr1:13073475
|
C | T | 3 | a0006c0007t0002g0083a0023c0027t0002g0019a0024c0028t0002g0019 | 3 | HG02280.hp1 HG03041.hp1 NA19030.hp1 |
intron_variant | MODIFIER | c.-16-203C>T | PRAMEF25 | ENSG00000229571.7 | transcript | ENST00000619661.3 | protein_coding | 1/3 | chr1 | 13073475 | ||||||
chr1:13073547
|
T | A | 3 | a0006c0007t0002g0083a0023c0027t0002g0019a0024c0028t0002g0019 | 3 | HG02280.hp1 HG03041.hp1 NA19030.hp1 |
intron_variant | MODIFIER | c.-16-131T>A | PRAMEF25 | ENSG00000229571.7 | transcript | ENST00000619661.3 | protein_coding | 1/3 | chr1 | 13073547 | ||||||
chr1:13073572
|
G | A | 5 | a0006c0007t0002g0083a0006c0007t0007g0011a0006c0029t0002g0020others(2): Show | 6 | HG01884.hp2 HG02280.hp1 HG03041.hp1 others(3): Show |
intron_variant | MODIFIER | c.-16-106G>A | PRAMEF25 | ENSG00000229571.7 | transcript | ENST00000619661.3 | protein_coding | 1/3 | chr1 | 13073572 | ||||||
chr1:13073575
|
G | C | 5 | a0006c0007t0002g0083a0006c0007t0007g0011a0006c0029t0002g0020others(2): Show | 6 | HG01884.hp2 HG02280.hp1 HG03041.hp1 others(3): Show |
intron_variant | MODIFIER | c.-16-103G>C | PRAMEF25 | ENSG00000229571.7 | transcript | ENST00000619661.3 | protein_coding | 1/3 | chr1 | 13073575 | ||||||
chr1:13073590
|
A | G | 5 | a0006c0007t0002g0083a0006c0007t0007g0011a0006c0029t0002g0020others(2): Show | 6 | HG01884.hp2 HG02280.hp1 HG03041.hp1 others(3): Show |
intron_variant | MODIFIER | c.-16-88A>G | PRAMEF25 | ENSG00000229571.7 | transcript | ENST00000619661.3 | protein_coding | 1/3 | chr1 | 13073590 | ||||||
chr1:13073599
|
C | G | 5 | a0006c0007t0002g0083a0006c0007t0007g0011a0006c0029t0002g0020others(2): Show | 6 | HG01884.hp2 HG02280.hp1 HG03041.hp1 others(3): Show |
intron_variant | MODIFIER | c.-16-79C>G | PRAMEF25 | ENSG00000229571.7 | transcript | ENST00000619661.3 | protein_coding | 1/3 | chr1 | 13073599 | ||||||
chr1:13073607
|
C | A | 5 | a0006c0007t0002g0083a0006c0007t0007g0011a0006c0029t0002g0020others(2): Show | 6 | HG01884.hp2 HG02280.hp1 HG03041.hp1 others(3): Show |
intron_variant | MODIFIER | c.-16-71C>A | PRAMEF25 | ENSG00000229571.7 | transcript | ENST00000619661.3 | protein_coding | 1/3 | chr1 | 13073607 | ||||||
chr1:13073609
|
G | A | 5 | a0006c0007t0002g0083a0006c0007t0007g0011a0006c0029t0002g0020others(2): Show | 6 | HG01884.hp2 HG02280.hp1 HG03041.hp1 others(3): Show |
intron_variant | MODIFIER | c.-16-69G>A | PRAMEF25 | ENSG00000229571.7 | transcript | ENST00000619661.3 | protein_coding | 1/3 | chr1 | 13073609 | ||||||
chr1:13073615
|
A | G | 5 | a0006c0007t0002g0083a0006c0007t0007g0011a0006c0029t0002g0020others(2): Show | 6 | HG01884.hp2 HG02280.hp1 HG03041.hp1 others(3): Show |
intron_variant | MODIFIER | c.-16-63A>G | PRAMEF25 | ENSG00000229571.7 | transcript | ENST00000619661.3 | protein_coding | 1/3 | chr1 | 13073615 | ||||||
chr1:13073636
|
T | G | 5 | a0006c0007t0002g0083a0006c0007t0007g0011a0006c0029t0002g0020others(2): Show | 6 | HG01884.hp2 HG02280.hp1 HG03041.hp1 others(3): Show |
intron_variant | MODIFIER | c.-16-42T>G | PRAMEF25 | ENSG00000229571.7 | transcript | ENST00000619661.3 | protein_coding | 1/3 | chr1 | 13073636 | ||||||
chr1:13073639
|
T | C | 5 | a0006c0007t0002g0083a0006c0007t0007g0011a0006c0029t0002g0020others(2): Show | 6 | HG01884.hp2 HG02280.hp1 HG03041.hp1 others(3): Show |
intron_variant | MODIFIER | c.-16-39T>C | PRAMEF25 | ENSG00000229571.7 | transcript | ENST00000619661.3 | protein_coding | 1/3 | chr1 | 13073639 | ||||||
chr1:13073645
|
T | A | 5 | a0006c0007t0002g0083a0006c0007t0007g0011a0006c0029t0002g0020others(2): Show | 6 | HG01884.hp2 HG02280.hp1 HG03041.hp1 others(3): Show |
intron_variant | MODIFIER | c.-16-33T>A | PRAMEF25 | ENSG00000229571.7 | transcript | ENST00000619661.3 | protein_coding | 1/3 | chr1 | 13073645 | ||||||
chr1:13073996
|
G | T | 5 | a0004c0004t0003g0062a0004c0004t0003g0078a0004c0004t0009g0069others(2): Show | 5 | HG02071.hp2 HG02698.hp1 NA18966.hp2 others(2): Show |
intron_variant | MODIFIER | c.293+10G>T | PRAMEF25 | ENSG00000229571.7 | transcript | ENST00000619661.3 | protein_coding | 2/3 | chr1 | 13073996 | ||||||
chr1:13074004
|
G | A | 1 | a0003c0003t0001g0053 | 1 | HG02109.hp1 | intron_variant | MODIFIER | c.293+18G>A | PRAMEF25 | ENSG00000229571.7 | transcript | ENST00000619661.3 | protein_coding | 2/3 | chr1 | 13074004 | ||||||
chr1:13074021
|
C | T | 1 | a0003c0003t0001g0059 | 1 | HG01081.hp1 | intron_variant | MODIFIER | c.293+35C>T | PRAMEF25 | ENSG00000229571.7 | transcript | ENST00000619661.3 | protein_coding | 2/3 | chr1 | 13074021 | ||||||
chr1:13074076
|
C | G | 19 | a0004c0004t0003g0009a0004c0004t0003g0062a0004c0004t0003g0063others(16): Show | 20 | HG01952.hp1 HG01981.hp1 HG01981.hp2 others(17): Show |
intron_variant | MODIFIER | c.293+90C>G | PRAMEF25 | ENSG00000229571.7 | transcript | ENST00000619661.3 | protein_coding | 2/3 | chr1 | 13074076 | ||||||
chr1:13074142
|
G | C | 7 | a0001c0001t0001g0007a0001c0001t0001g0015a0001c0001t0001g0026others(4): Show | 9 | HG00558.hp1 HG00558.hp2 NA18959.hp1 others(6): Show |
intron_variant | MODIFIER | c.293+156G>C | PRAMEF25 | ENSG00000229571.7 | transcript | ENST00000619661.3 | protein_coding | 2/3 | chr1 | 13074142 | ||||||
chr1:13074147
|
T | C | 7 | a0001c0001t0001g0007a0001c0001t0001g0015a0001c0001t0001g0026others(4): Show | 9 | HG00558.hp1 HG00558.hp2 NA18959.hp1 others(6): Show |
intron_variant | MODIFIER | c.293+161T>C | PRAMEF25 | ENSG00000229571.7 | transcript | ENST00000619661.3 | protein_coding | 2/3 | chr1 | 13074147 | ||||||
chr1:13074150
|
C | A | 7 | a0001c0001t0001g0007a0001c0001t0001g0015a0001c0001t0001g0026others(4): Show | 9 | HG00558.hp1 HG00558.hp2 NA18959.hp1 others(6): Show |
intron_variant | MODIFIER | c.293+164C>A | PRAMEF25 | ENSG00000229571.7 | transcript | ENST00000619661.3 | protein_coding | 2/3 | chr1 | 13074150 | ||||||
chr1:13074158
|
T | C | 7 | a0005c0005t0002g0010a0005c0005t0002g0087a0005c0005t0002g0089others(4): Show | 8 | HG01884.hp1 HG02280.hp2 HG02698.hp2 others(5): Show |
intron_variant | MODIFIER | c.293+172T>C | PRAMEF25 | ENSG00000229571.7 | transcript | ENST00000619661.3 | protein_coding | 2/3 | chr1 | 13074158 | ||||||
chr1:13074167
|
C | A | 1 | a0012c0011t0013g0079 | 1 | HG02895.hp2 | intron_variant | MODIFIER | c.293+181C>A | PRAMEF25 | ENSG00000229571.7 | transcript | ENST00000619661.3 | protein_coding | 2/3 | chr1 | 13074167 | ||||||
chr1:13074180
|
C | T | 5 | a0005c0005t0002g0010a0005c0005t0002g0087a0005c0005t0002g0089others(2): Show | 6 | HG01884.hp1 HG02698.hp2 HG03017.hp2 others(3): Show |
intron_variant | MODIFIER | c.293+194C>T | PRAMEF25 | ENSG00000229571.7 | transcript | ENST00000619661.3 | protein_coding | 2/3 | chr1 | 13074180 | ||||||
chr1:13074204
|
G | T | 1 | a0010c0024t0002g0091 | 1 | HG03453.hp2 | intron_variant | MODIFIER | c.293+218G>T | PRAMEF25 | ENSG00000229571.7 | transcript | ENST00000619661.3 | protein_coding | 2/3 | chr1 | 13074204 | ||||||
chr1:13074245
|
T | A | 1 | a0021c0012t0002g0088 | 1 | HG02280.hp2 | intron_variant | MODIFIER | c.293+259T>A | PRAMEF25 | ENSG00000229571.7 | transcript | ENST00000619661.3 | protein_coding | 2/3 | chr1 | 13074245 | ||||||
chr1:13074265
|
C | T | 61 | a0001c0001t0001g0006a0001c0001t0001g0012a0001c0001t0001g0026others(58): Show | 72 | HG00323.hp2 HG00558.hp2 HG00639.hp2 others(69): Show |
intron_variant | MODIFIER | c.293+279C>T | PRAMEF25 | ENSG00000229571.7 | transcript | ENST00000619661.3 | protein_coding | 2/3 | chr1 | 13074265 | ||||||
chr1:13074362
|
TC | T | 3 | a0003c0003t0001g0054a0011c0023t0004g0073a0017c0016t0003g0082 | 3 | NA18942.hp2 NA18946.hp2 NA19075.hp1 |
intron_variant | MODIFIER | c.294-294delC | PRAMEF25 | ENSG00000229571.7 | transcript | ENST00000619661.3 | protein_coding | 2/3 | INFO_REALIGN_3_PRIME | chr1 | 13074362 | |||||
chr1:13074480
|
C | CA | 17 | a0001c0001t0002g0072a0002c0002t0001g0005a0002c0002t0001g0028others(14): Show | 19 | HG01952.hp1 HG01981.hp2 HG02273.hp1 others(16): Show |
intron_variant | MODIFIER | c.294-156dupA | PRAMEF25 | ENSG00000229571.7 | transcript | ENST00000619661.3 | protein_coding | 2/3 | INFO_REALIGN_3_PRIME | chr1 | 13074480 | |||||
chr1:13074480
|
CA | C | 23 | a0001c0001t0001g0001a0001c0001t0001g0014a0001c0001t0001g0015others(20): Show | 42 | HG00558.hp1 HG00609.hp2 HG00639.hp1 others(39): Show |
intron_variant | MODIFIER | c.294-156delA | PRAMEF25 | ENSG00000229571.7 | transcript | ENST00000619661.3 | protein_coding | 2/3 | INFO_REALIGN_3_PRIME | chr1 | 13074480 | |||||
chr1:13074480
|
CAAAAAAA | C | 4 | a0006c0007t0007g0011a0006c0029t0002g0020a0023c0027t0002g0019others(1): Show | 5 | HG01884.hp2 HG02280.hp1 HG03041.hp1 others(2): Show |
intron_variant | MODIFIER | c.294-162_294-156del others(7): Show |
PRAMEF25 | ENSG00000229571.7 | transcript | ENST00000619661.3 | protein_coding | 2/3 | INFO_REALIGN_3_PRIME | chr1 | 13074480 | |||||
chr1:13074480
|
CAAAAAAA others(4): Show |
C | 2 | a0004c0004t0003g0062a0004c0004t0003g0078 | 2 | NA18966.hp2 NA19005.hp2 |
intron_variant | MODIFIER | c.294-166_294-156del others(11): Show |
PRAMEF25 | ENSG00000229571.7 | transcript | ENST00000619661.3 | protein_coding | 2/3 | INFO_REALIGN_3_PRIME | chr1 | 13074480 | |||||
chr1:13074517
|
A | G | 1 | a0005c0005t0002g0087 | 1 | NA18995.hp1 | intron_variant | MODIFIER | c.294-142A>G | PRAMEF25 | ENSG00000229571.7 | transcript | ENST00000619661.3 | protein_coding | 2/3 | chr1 | 13074517 | ||||||
chr1:13074626
|
G | T | 4 | a0006c0007t0007g0011a0006c0029t0002g0020a0023c0027t0002g0019others(1): Show | 5 | HG01884.hp2 HG02280.hp1 HG03041.hp1 others(2): Show |
intron_variant | MODIFIER | c.294-33G>T | PRAMEF25 | ENSG00000229571.7 | transcript | ENST00000619661.3 | protein_coding | 2/3 | chr1 | 13074626 | ||||||
chr1:13074640
|
C | T | 4 | a0006c0007t0007g0011a0006c0029t0002g0020a0023c0027t0002g0019others(1): Show | 5 | HG01884.hp2 HG02280.hp1 HG03041.hp1 others(2): Show |
intron_variant | MODIFIER | c.294-19C>T | PRAMEF25 | ENSG00000229571.7 | transcript | ENST00000619661.3 | protein_coding | 2/3 | chr1 | 13074640 | ||||||
chr1:13075286
|
G | A | 2 | a0023c0027t0002g0019a0024c0028t0002g0019 | 2 | HG02280.hp1 HG03041.hp1 |
intron_variant | MODIFIER | c.875+46G>A | PRAMEF25 | ENSG00000229571.7 | transcript | ENST00000619661.3 | protein_coding | 3/3 | chr1 | 13075286 | ||||||
chr1:13075299
|
C | A | 1 | a0004c0004t0004g0074 | 1 | NA18994.hp2 | intron_variant | MODIFIER | c.875+59C>A | PRAMEF25 | ENSG00000229571.7 | transcript | ENST00000619661.3 | protein_coding | 3/3 | chr1 | 13075299 | ||||||
chr1:13075336
|
A | T | 1 | a0001c0001t0001g0047 | 1 | HG01346.hp1 | intron_variant | MODIFIER | c.875+96A>T | PRAMEF25 | ENSG00000229571.7 | transcript | ENST00000619661.3 | protein_coding | 3/3 | chr1 | 13075336 | ||||||
chr1:13075400
|
G | A | 1 | a0001c0001t0001g0035 | 1 | NA18985.hp1 | intron_variant | MODIFIER | c.875+160G>A | PRAMEF25 | ENSG00000229571.7 | transcript | ENST00000619661.3 | protein_coding | 3/3 | chr1 | 13075400 | ||||||
chr1:13075483
|
A | C | 4 | a0006c0007t0007g0011a0006c0029t0002g0020a0023c0027t0002g0019others(1): Show | 5 | HG01884.hp2 HG02280.hp1 HG03041.hp1 others(2): Show |
intron_variant | MODIFIER | c.875+243A>C | PRAMEF25 | ENSG00000229571.7 | transcript | ENST00000619661.3 | protein_coding | 3/3 | chr1 | 13075483 | ||||||
chr1:13075566
|
C | T | 4 | a0002c0002t0005g0070a0002c0002t0005g0081a0012c0011t0013g0079others(1): Show | 4 | HG00323.hp2 HG02895.hp1 HG02895.hp2 others(1): Show |
intron_variant | MODIFIER | c.875+326C>T | PRAMEF25 | ENSG00000229571.7 | transcript | ENST00000619661.3 | protein_coding | 3/3 | chr1 | 13075566 | ||||||
chr1:13075572
|
A | G | 1 | a0004c0004t0003g0062 | 1 | NA18966.hp2 | intron_variant | MODIFIER | c.875+332A>G | PRAMEF25 | ENSG00000229571.7 | transcript | ENST00000619661.3 | protein_coding | 3/3 | chr1 | 13075572 | ||||||
chr1:13075597
|
T | G | 4 | a0002c0002t0005g0070a0002c0002t0005g0081a0012c0011t0013g0079others(1): Show | 4 | HG00323.hp2 HG02895.hp1 HG02895.hp2 others(1): Show |
intron_variant | MODIFIER | c.875+357T>G | PRAMEF25 | ENSG00000229571.7 | transcript | ENST00000619661.3 | protein_coding | 3/3 | chr1 | 13075597 | ||||||
chr1:13075664
|
C | A | 1 | a0012c0011t0013g0079 | 1 | HG02895.hp2 | intron_variant | MODIFIER | c.875+424C>A | PRAMEF25 | ENSG00000229571.7 | transcript | ENST00000619661.3 | protein_coding | 3/3 | chr1 | 13075664 | ||||||
chr1:13075688
|
G | T | 1 | a0012c0011t0013g0079 | 1 | HG02895.hp2 | intron_variant | MODIFIER | c.875+448G>T | PRAMEF25 | ENSG00000229571.7 | transcript | ENST00000619661.3 | protein_coding | 3/3 | chr1 | 13075688 | ||||||
chr1:13075716
|
CT | C | 5 | a0002c0002t0002g0051a0002c0002t0016g0050a0017c0016t0003g0082others(2): Show | 5 | HG02895.hp1 HG03225.hp2 HG03688.hp1 others(2): Show |
intron_variant | MODIFIER | c.875+487delT | PRAMEF25 | ENSG00000229571.7 | transcript | ENST00000619661.3 | protein_coding | 3/3 | INFO_REALIGN_3_PRIME | chr1 | 13075716 | |||||
chr1:13075725
|
T | A | 1 | a0007c0006t0001g0043 | 1 | NA19090.hp1 | intron_variant | MODIFIER | c.875+485T>A | PRAMEF25 | ENSG00000229571.7 | transcript | ENST00000619661.3 | protein_coding | 3/3 | chr1 | 13075725 | ||||||
chr1:13075735
|
G | T | 1 | a0020c0022t0002g0023 | 1 | HG03225.hp2 | intron_variant | MODIFIER | c.875+495G>T | PRAMEF25 | ENSG00000229571.7 | transcript | ENST00000619661.3 | protein_coding | 3/3 | chr1 | 13075735 | ||||||
chr1:13075737
|
AT | A | 46 | a0001c0001t0001g0001a0001c0001t0001g0004a0001c0001t0001g0006others(43): Show | 85 | HG00558.hp1 HG00558.hp2 HG00609.hp2 others(82): Show |
intron_variant | MODIFIER | c.875+501delT | PRAMEF25 | ENSG00000229571.7 | transcript | ENST00000619661.3 | protein_coding | 3/3 | INFO_REALIGN_3_PRIME | chr1 | 13075737 | |||||
chr1:13075743
|
A | G | 1 | a0001c0001t0001g0046 | 1 | HG03540.hp1 | intron_variant | MODIFIER | c.875+503A>G | PRAMEF25 | ENSG00000229571.7 | transcript | ENST00000619661.3 | protein_coding | 3/3 | chr1 | 13075743 | ||||||
chr1:13075762
|
G | C | 1 | a0002c0002t0001g0029 | 1 | HG01934.hp2 | intron_variant | MODIFIER | c.875+522G>C | PRAMEF25 | ENSG00000229571.7 | transcript | ENST00000619661.3 | protein_coding | 3/3 | chr1 | 13075762 | ||||||
chr1:13075784
|
C | T | 1 | a0002c0002t0002g0058 | 1 | HG02135.hp2 | intron_variant | MODIFIER | c.875+544C>T | PRAMEF25 | ENSG00000229571.7 | transcript | ENST00000619661.3 | protein_coding | 3/3 | chr1 | 13075784 | ||||||
chr1:13075861
|
G | A | 4 | a0002c0002t0005g0070a0002c0002t0005g0081a0012c0011t0013g0079others(1): Show | 4 | HG00323.hp2 HG02895.hp1 HG02895.hp2 others(1): Show |
intron_variant | MODIFIER | c.875+621G>A | PRAMEF25 | ENSG00000229571.7 | transcript | ENST00000619661.3 | protein_coding | 3/3 | chr1 | 13075861 | ||||||
chr1:13075879
|
A | T | 1 | a0004c0004t0003g0066 | 1 | NA19067.hp2 | intron_variant | MODIFIER | c.875+639A>T | PRAMEF25 | ENSG00000229571.7 | transcript | ENST00000619661.3 | protein_coding | 3/3 | chr1 | 13075879 | ||||||
chr1:13075915
|
G | T | 1 | a0017c0016t0003g0082 | 1 | NA18946.hp2 | intron_variant | MODIFIER | c.875+675G>T | PRAMEF25 | ENSG00000229571.7 | transcript | ENST00000619661.3 | protein_coding | 3/3 | chr1 | 13075915 | ||||||
chr1:13075956
|
G | A | 2 | a0023c0027t0002g0019a0024c0028t0002g0019 | 2 | HG02280.hp1 HG03041.hp1 |
intron_variant | MODIFIER | c.875+716G>A | PRAMEF25 | ENSG00000229571.7 | transcript | ENST00000619661.3 | protein_coding | 3/3 | chr1 | 13075956 | ||||||
chr1:13075973
|
A | G | 1 | a0006c0029t0002g0020 | 1 | HG01884.hp2 | intron_variant | MODIFIER | c.875+733A>G | PRAMEF25 | ENSG00000229571.7 | transcript | ENST00000619661.3 | protein_coding | 3/3 | chr1 | 13075973 | ||||||
chr1:13076040
|
G | T | 45 | a0001c0001t0001g0001a0001c0001t0001g0004a0001c0001t0001g0006others(42): Show | 85 | HG00558.hp1 HG00558.hp2 HG00609.hp2 others(82): Show |
intron_variant | MODIFIER | c.875+800G>T | PRAMEF25 | ENSG00000229571.7 | transcript | ENST00000619661.3 | protein_coding | 3/3 | chr1 | 13076040 | ||||||
chr1:13076069
|
G | C | 1 | a0002c0002t0001g0055 | 1 | HG03017.hp1 | intron_variant | MODIFIER | c.875+829G>C | PRAMEF25 | ENSG00000229571.7 | transcript | ENST00000619661.3 | protein_coding | 3/3 | chr1 | 13076069 | ||||||
chr1:13076115
|
T | C | 31 | a0001c0001t0001g0006a0001c0001t0001g0007a0001c0001t0001g0012others(28): Show | 40 | HG00558.hp1 HG00558.hp2 HG00609.hp1 others(37): Show |
intron_variant | MODIFIER | c.875+875T>C | PRAMEF25 | ENSG00000229571.7 | transcript | ENST00000619661.3 | protein_coding | 3/3 | chr1 | 13076115 | ||||||
chr1:13076127
|
C | T | 26 | a0004c0004t0003g0009a0004c0004t0003g0062a0004c0004t0003g0063others(23): Show | 28 | HG01884.hp1 HG01952.hp1 HG01981.hp1 others(25): Show |
intron_variant | MODIFIER | c.876-864C>T | PRAMEF25 | ENSG00000229571.7 | transcript | ENST00000619661.3 | protein_coding | 3/3 | chr1 | 13076127 | ||||||
chr1:13076170
|
G | A | 2 | a0023c0027t0002g0019a0024c0028t0002g0019 | 2 | HG02280.hp1 HG03041.hp1 |
intron_variant | MODIFIER | c.876-821G>A | PRAMEF25 | ENSG00000229571.7 | transcript | ENST00000619661.3 | protein_coding | 3/3 | chr1 | 13076170 | ||||||
chr1:13076196
|
A | G | 24 | a0002c0002t0001g0003a0002c0002t0001g0024a0002c0002t0001g0025others(21): Show | 28 | HG00609.hp1 HG00639.hp2 HG01070.hp2 others(25): Show |
intron_variant | MODIFIER | c.876-795A>G | PRAMEF25 | ENSG00000229571.7 | transcript | ENST00000619661.3 | protein_coding | 3/3 | chr1 | 13076196 | ||||||
chr1:13076206
|
A | C | 1 | a0003c0003t0001g0057 | 1 | HG03486.hp1 | intron_variant | MODIFIER | c.876-785A>C | PRAMEF25 | ENSG00000229571.7 | transcript | ENST00000619661.3 | protein_coding | 3/3 | chr1 | 13076206 | ||||||
chr1:13076315
|
A | C | 1 | a0003c0003t0001g0057 | 1 | HG03486.hp1 | intron_variant | MODIFIER | c.876-676A>C | PRAMEF25 | ENSG00000229571.7 | transcript | ENST00000619661.3 | protein_coding | 3/3 | chr1 | 13076315 | ||||||
chr1:13076316
|
C | A | 6 | a0003c0003t0001g0057a0005c0005t0002g0010a0005c0005t0002g0087others(3): Show | 7 | HG01884.hp1 HG02698.hp2 HG03017.hp2 others(4): Show |
intron_variant | MODIFIER | c.876-675C>A | PRAMEF25 | ENSG00000229571.7 | transcript | ENST00000619661.3 | protein_coding | 3/3 | chr1 | 13076316 | ||||||
chr1:13076317
|
C | T | 19 | a0004c0004t0003g0009a0004c0004t0003g0062a0004c0004t0003g0063others(16): Show | 20 | HG01952.hp1 HG01981.hp1 HG01981.hp2 others(17): Show |
intron_variant | MODIFIER | c.876-674C>T | PRAMEF25 | ENSG00000229571.7 | transcript | ENST00000619661.3 | protein_coding | 3/3 | chr1 | 13076317 | ||||||
chr1:13076349
|
T | TGTCCTTT others(19): Show |
1 | a0003c0003t0001g0053 | 1 | HG02109.hp1 | intron_variant | MODIFIER | c.876-640_876-615dup others(26): Show |
PRAMEF25 | ENSG00000229571.7 | transcript | ENST00000619661.3 | protein_coding | 3/3 | INFO_REALIGN_3_PRIME | chr1 | 13076349 | |||||
chr1:13076383
|
T | C | 21 | a0002c0002t0016g0050a0004c0004t0003g0009a0004c0004t0003g0062others(18): Show | 22 | HG01952.hp1 HG01981.hp1 HG01981.hp2 others(19): Show |
intron_variant | MODIFIER | c.876-608T>C | PRAMEF25 | ENSG00000229571.7 | transcript | ENST00000619661.3 | protein_coding | 3/3 | chr1 | 13076383 | ||||||
chr1:13076423
|
G | C | 1 | a0009c0026t0001g0045 | 1 | NA19089.hp1 | intron_variant | MODIFIER | c.876-568G>C | PRAMEF25 | ENSG00000229571.7 | transcript | ENST00000619661.3 | protein_coding | 3/3 | chr1 | 13076423 | ||||||
chr1:13076444
|
A | G | 1 | a0002c0002t0002g0051 | 1 | HG06807.hp2 | intron_variant | MODIFIER | c.876-547A>G | PRAMEF25 | ENSG00000229571.7 | transcript | ENST00000619661.3 | protein_coding | 3/3 | chr1 | 13076444 | ||||||
chr1:13076469
|
G | C | 1 | a0017c0016t0003g0082 | 1 | NA18946.hp2 | intron_variant | MODIFIER | c.876-522G>C | PRAMEF25 | ENSG00000229571.7 | transcript | ENST00000619661.3 | protein_coding | 3/3 | chr1 | 13076469 | ||||||
chr1:13076487
|
CA | C | 2 | a0017c0016t0003g0082a0020c0022t0002g0023 | 2 | HG03225.hp2 NA18946.hp2 |
intron_variant | MODIFIER | c.876-501delA | PRAMEF25 | ENSG00000229571.7 | transcript | ENST00000619661.3 | protein_coding | 3/3 | INFO_REALIGN_3_PRIME | chr1 | 13076487 | |||||
chr1:13076508
|
C | CT | 18 | a0002c0002t0005g0081a0002c0002t0010g0021a0004c0004t0003g0009others(15): Show | 19 | HG00323.hp2 HG01952.hp1 HG01981.hp1 others(16): Show |
intron_variant | MODIFIER | c.876-471dupT | PRAMEF25 | ENSG00000229571.7 | transcript | ENST00000619661.3 | protein_coding | 3/3 | INFO_REALIGN_3_PRIME | chr1 | 13076508 | |||||
chr1:13076508
|
C | T | 1 | a0004c0010t0003g0068 | 1 | NA19065.hp2 | intron_variant | MODIFIER | c.876-483C>T | PRAMEF25 | ENSG00000229571.7 | transcript | ENST00000619661.3 | protein_coding | 3/3 | chr1 | 13076508 | ||||||
chr1:13076511
|
T | C | 4 | a0001c0001t0011g0084a0006c0007t0002g0083a0023c0027t0002g0019others(1): Show | 4 | HG02280.hp1 HG03041.hp1 NA19030.hp1 others(1): Show |
intron_variant | MODIFIER | c.876-480T>C | PRAMEF25 | ENSG00000229571.7 | transcript | ENST00000619661.3 | protein_coding | 3/3 | chr1 | 13076511 | ||||||
chr1:13076521
|
A | T | 1 | a0002c0002t0016g0050 | 1 | HG03688.hp1 | intron_variant | MODIFIER | c.876-470A>T | PRAMEF25 | ENSG00000229571.7 | transcript | ENST00000619661.3 | protein_coding | 3/3 | chr1 | 13076521 | ||||||
chr1:13076524
|
G | A | 58 | a0001c0001t0011g0084a0002c0002t0001g0003a0002c0002t0001g0024others(55): Show | 65 | HG00323.hp1 HG00323.hp2 HG00609.hp1 others(62): Show |
intron_variant | MODIFIER | c.876-467G>A | PRAMEF25 | ENSG00000229571.7 | transcript | ENST00000619661.3 | protein_coding | 3/3 | chr1 | 13076524 | ||||||
chr1:13076526
|
G | A | 58 | a0001c0001t0011g0084a0002c0002t0001g0003a0002c0002t0001g0024others(55): Show | 65 | HG00323.hp1 HG00323.hp2 HG00609.hp1 others(62): Show |
intron_variant | MODIFIER | c.876-465G>A | PRAMEF25 | ENSG00000229571.7 | transcript | ENST00000619661.3 | protein_coding | 3/3 | chr1 | 13076526 | ||||||
chr1:13076534
|
T | C | 1 | a0001c0001t0012g0071 | 1 | HG02451.hp1 | intron_variant | MODIFIER | c.876-457T>C | PRAMEF25 | ENSG00000229571.7 | transcript | ENST00000619661.3 | protein_coding | 3/3 | chr1 | 13076534 | ||||||
chr1:13076575
|
T | A | 21 | a0002c0002t0010g0021a0002c0002t0016g0050a0004c0004t0003g0009others(18): Show | 22 | HG01952.hp1 HG01981.hp1 HG01981.hp2 others(19): Show |
intron_variant | MODIFIER | c.876-416T>A | PRAMEF25 | ENSG00000229571.7 | transcript | ENST00000619661.3 | protein_coding | 3/3 | chr1 | 13076575 | ||||||
chr1:13076597
|
G | C | 7 | a0005c0005t0002g0010a0005c0005t0002g0087a0005c0005t0002g0089others(4): Show | 8 | HG01884.hp1 HG02280.hp2 HG02698.hp2 others(5): Show |
intron_variant | MODIFIER | c.876-394G>C | PRAMEF25 | ENSG00000229571.7 | transcript | ENST00000619661.3 | protein_coding | 3/3 | chr1 | 13076597 | ||||||
chr1:13076651
|
C | T | 3 | a0001c0001t0001g0042a0005c0005t0002g0087a0005c0005t0002g0089 | 3 | NA18995.hp1 NA19004.hp1 NA19083.hp1 |
intron_variant | MODIFIER | c.876-340C>T | PRAMEF25 | ENSG00000229571.7 | transcript | ENST00000619661.3 | protein_coding | 3/3 | chr1 | 13076651 | ||||||
chr1:13076652
|
G | A | 1 | a0004c0010t0003g0068 | 1 | NA19065.hp2 | intron_variant | MODIFIER | c.876-339G>A | PRAMEF25 | ENSG00000229571.7 | transcript | ENST00000619661.3 | protein_coding | 3/3 | chr1 | 13076652 | ||||||
chr1:13076652
|
G | C | 26 | a0001c0001t0001g0041a0001c0001t0011g0084a0002c0002t0001g0003others(23): Show | 30 | HG00609.hp1 HG00639.hp2 HG01070.hp2 others(27): Show |
intron_variant | MODIFIER | c.876-339G>C | PRAMEF25 | ENSG00000229571.7 | transcript | ENST00000619661.3 | protein_coding | 3/3 | chr1 | 13076652 | ||||||
chr1:13076661
|
G | C | 33 | a0001c0001t0001g0041a0001c0001t0011g0084a0002c0002t0001g0003others(30): Show | 38 | HG00609.hp1 HG00639.hp2 HG01070.hp2 others(35): Show |
intron_variant | MODIFIER | c.876-330G>C | PRAMEF25 | ENSG00000229571.7 | transcript | ENST00000619661.3 | protein_coding | 3/3 | chr1 | 13076661 | ||||||
chr1:13076662
|
C | A | 2 | a0002c0002t0010g0021a0002c0002t0016g0050 | 2 | HG03688.hp1 NA18977.hp2 |
intron_variant | MODIFIER | c.876-329C>A | PRAMEF25 | ENSG00000229571.7 | transcript | ENST00000619661.3 | protein_coding | 3/3 | chr1 | 13076662 | ||||||
chr1:13076670
|
T | G | 1 | a0001c0008t0001g0016 | 2 | HG01070.hp1 HG01071.hp1 |
intron_variant | MODIFIER | c.876-321T>G | PRAMEF25 | ENSG00000229571.7 | transcript | ENST00000619661.3 | protein_coding | 3/3 | chr1 | 13076670 | ||||||
chr1:13076693
|
A | C | 1 | a0003c0003t0001g0057 | 1 | HG03486.hp1 | intron_variant | MODIFIER | c.876-298A>C | PRAMEF25 | ENSG00000229571.7 | transcript | ENST00000619661.3 | protein_coding | 3/3 | chr1 | 13076693 | ||||||
chr1:13076694
|
G | A | 2 | a0002c0002t0010g0021a0002c0002t0016g0050 | 2 | HG03688.hp1 NA18977.hp2 |
intron_variant | MODIFIER | c.876-297G>A | PRAMEF25 | ENSG00000229571.7 | transcript | ENST00000619661.3 | protein_coding | 3/3 | chr1 | 13076694 | ||||||
chr1:13076734
|
C | A | 1 | a0017c0016t0003g0082 | 1 | NA18946.hp2 | intron_variant | MODIFIER | c.876-257C>A | PRAMEF25 | ENSG00000229571.7 | transcript | ENST00000619661.3 | protein_coding | 3/3 | chr1 | 13076734 | ||||||
chr1:13076768
|
T | G | 3 | a0002c0002t0005g0070a0002c0002t0005g0081a0022c0025t0005g0080 | 3 | HG00323.hp2 HG02895.hp1 HG03225.hp1 |
intron_variant | MODIFIER | c.876-223T>G | PRAMEF25 | ENSG00000229571.7 | transcript | ENST00000619661.3 | protein_coding | 3/3 | chr1 | 13076768 | ||||||
chr1:13076795
|
GC | G | 2 | a0004c0004t0003g0065a0020c0022t0002g0023 | 2 | HG03225.hp2 NA19089.hp2 |
intron_variant | MODIFIER | c.876-194delC | PRAMEF25 | ENSG00000229571.7 | transcript | ENST00000619661.3 | protein_coding | 3/3 | INFO_REALIGN_3_PRIME | chr1 | 13076795 | |||||
chr1:13076842
|
A | T | 1 | a0007c0006t0001g0043 | 1 | NA19090.hp1 | intron_variant | MODIFIER | c.876-149A>T | PRAMEF25 | ENSG00000229571.7 | transcript | ENST00000619661.3 | protein_coding | 3/3 | chr1 | 13076842 | ||||||
chr1:13076851
|
G | A | 2 | a0001c0001t0011g0084a0006c0007t0002g0083 | 2 | NA19030.hp1 NA19030.hp2 |
intron_variant | MODIFIER | c.876-140G>A | PRAMEF25 | ENSG00000229571.7 | transcript | ENST00000619661.3 | protein_coding | 3/3 | chr1 | 13076851 | ||||||
chr1:13076893
|
G | T | 1 | a0002c0002t0001g0030 | 1 | HG01099.hp1 | intron_variant | MODIFIER | c.876-98G>T | PRAMEF25 | ENSG00000229571.7 | transcript | ENST00000619661.3 | protein_coding | 3/3 | chr1 | 13076893 | ||||||
chr1:13076925
|
A | T | 1 | a0017c0016t0003g0082 | 1 | NA18946.hp2 | intron_variant | MODIFIER | c.876-66A>T | PRAMEF25 | ENSG00000229571.7 | transcript | ENST00000619661.3 | protein_coding | 3/3 | chr1 | 13076925 | ||||||
chr1:13076985
|
C | T | 1 | a0002c0002t0002g0061 | 1 | NA18954.hp1 | splice_region_variant&intron_variant | LOW | c.876-6C>T | PRAMEF25 | ENSG00000229571.7 | transcript | ENST00000619661.3 | protein_coding | 3/3 | chr1 | 13076985 | ||||||
chr1:13076987
|
C | A | 21 | a0001c0001t0011g0084a0002c0002t0001g0056a0002c0002t0001g0060others(18): Show | 22 | HG00323.hp1 HG00323.hp2 HG01884.hp1 others(19): Show |
splice_region_variant&intron_variant | LOW | c.876-4C>A | PRAMEF25 | ENSG00000229571.7 | transcript | ENST00000619661.3 | protein_coding | 3/3 | chr1 | 13076987 |