Search by Genic region
Multiple Alignments (by aa haplotype frequency)
Multiple Alignments (by aa haplotype similarity)
| Item | Value |
|---|---|
| geneid | 6474 |
| ensemblid | ENSG00000168779.21 |
| hgncid | 10854 |
| symbol | SHOX2 |
| name | short stature homeobox 2 |
| refseq_nuc | NM_001163678.2 |
| refseq_prot | NP_001157150.1 |
| ensembl_nuc | ENST00000483851.7 |
| ensembl_prot | ENSP00000419362.1 |
| mane_status | MANE Select |
| chr | chr3 |
| start | 158095905 |
| end | 158106420 |
| strand | - |
| ver | v1.2 |
| region | chr3:158095905-158106420 |
| region5000 | chr3:158090905-158111420 |
| regionname0 | SHOX2_chr3_158095905_158106420 |
| regionname5000 | SHOX2_chr3_158090905_158111420 |
| ahapid | grch38/chm13v2 | alen | total | AFR | AMR | EAS | EUR | SAS | JPT | regionname | genename | aa | chr | start | end |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| a0001 | 1/1 | 319 | 373 | 89 | 68 | 153 | 16 | 45 | 113 | SHOX2_chr3_158090905_158111420 | SHOX2 | MEELT others(314): Show |
chr3 | 158090905 | 158111420 |
| a0002 | 0/0 | 319 | 4 | 0 | 0 | 4 | 0 | 0 | 4 | SHOX2_chr3_158090905_158111420 | SHOX2 | MEELT others(314): Show |
chr3 | 158090905 | 158111420 |
| a0003 | 0/0 | 323 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | SHOX2_chr3_158090905_158111420 | SHOX2 | MEELT others(318): Show |
chr3 | 158090905 | 158111420 |
| a0004 | 0/0 | 315 | 1 | 0 | 0 | 0 | 0 | 1 | 0 | SHOX2_chr3_158090905_158111420 | SHOX2 | MEELT others(310): Show |
chr3 | 158090905 | 158111420 |
| a0005 | 0/0 | 312 | 1 | 0 | 0 | 1 | 0 | 0 | 1 | SHOX2_chr3_158090905_158111420 | SHOX2 | MEELT others(307): Show |
chr3 | 158090905 | 158111420 |
| achapid | grch38/chm13v2 | alen | clen | total | AFR | AMR | EAS | EUR | SAS | regionname | genename | aseq | cseq | chr | start | end |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| a0001c0001 | 1/1 | 957 | 365 | 89 | 68 | 147 | 16 | 43 | SHOX2_chr3_158090905_158111420 | SHOX2 | ATGGA others(952): Show |
chr3 | 158090905 | 158111420 | ||
| a0001c0002 | 0/0 | 957 | 5 | 0 | 0 | 3 | 0 | 2 | SHOX2_chr3_158090905_158111420 | SHOX2 | ATGGA others(952): Show |
chr3 | 158090905 | 158111420 | ||
| a0001c0007 | 0/0 | 957 | 1 | 0 | 0 | 1 | 0 | 0 | SHOX2_chr3_158090905_158111420 | SHOX2 | ATGGA others(952): Show |
chr3 | 158090905 | 158111420 | ||
| a0001c0008 | 0/0 | 957 | 1 | 0 | 0 | 1 | 0 | 0 | SHOX2_chr3_158090905_158111420 | SHOX2 | ATGGA others(952): Show |
chr3 | 158090905 | 158111420 | ||
| a0001c0009 | 0/0 | 957 | 1 | 0 | 0 | 1 | 0 | 0 | SHOX2_chr3_158090905_158111420 | SHOX2 | ATGGA others(952): Show |
chr3 | 158090905 | 158111420 | ||
| a0002c0003 | 0/0 | 957 | 4 | 0 | 0 | 4 | 0 | 0 | SHOX2_chr3_158090905_158111420 | SHOX2 | ATGGA others(952): Show |
chr3 | 158090905 | 158111420 | ||
| a0003c0006 | 0/0 | 969 | 1 | 1 | 0 | 0 | 0 | 0 | SHOX2_chr3_158090905_158111420 | SHOX2 | ATGGA others(964): Show |
chr3 | 158090905 | 158111420 | ||
| a0004c0004 | 0/0 | 945 | 1 | 0 | 0 | 0 | 0 | 1 | SHOX2_chr3_158090905_158111420 | SHOX2 | ATGGA others(940): Show |
chr3 | 158090905 | 158111420 | ||
| a0005c0005 | 0/0 | 936 | 1 | 0 | 0 | 1 | 0 | 0 | SHOX2_chr3_158090905_158111420 | SHOX2 | ATGGA others(931): Show |
chr3 | 158090905 | 158111420 |
| acthapid | grch38chm13v2 | tlen | total | AFR | AMR | EAS | EUR | SAS | regionname | genename | tseq | chr | start | end |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| a0001c0001t0001 | 0/0 | 3478 | 109 | 6 | 18 | 59 | 7 | 19 | SHOX2_chr3_158090905_158111420 | SHOX2 | GCTAT others(3473): Show |
chr3 | 158090905 | 158111420 |
| a0001c0001t0002 | 0/0 | 3479 | 108 | 12 | 18 | 65 | 2 | 11 | SHOX2_chr3_158090905_158111420 | SHOX2 | GCTAT others(3474): Show |
chr3 | 158090905 | 158111420 |
| a0001c0001t0003 | 0/0 | 3478 | 60 | 37 | 13 | 3 | 4 | 3 | SHOX2_chr3_158090905_158111420 | SHOX2 | GCTAT others(3473): Show |
chr3 | 158090905 | 158111420 |
| a0001c0001t0004 | 0/0 | 3475 | 22 | 2 | 5 | 12 | 2 | 1 | SHOX2_chr3_158090905_158111420 | SHOX2 | GCTAT others(3470): Show |
chr3 | 158090905 | 158111420 |
| a0001c0001t0005 | 1/0 | 3478 | 16 | 1 | 6 | 0 | 1 | 7 | SHOX2_chr3_158090905_158111420 | SHOX2 | GCTAT others(3473): Show |
chr3 | 158090905 | 158111420 |
| a0001c0001t0006 | 0/0 | 3479 | 8 | 8 | 0 | 0 | 0 | 0 | SHOX2_chr3_158090905_158111420 | SHOX2 | GCTAT others(3474): Show |
chr3 | 158090905 | 158111420 |
| a0001c0001t0007 | 0/0 | 3478 | 4 | 0 | 0 | 4 | 0 | 0 | SHOX2_chr3_158090905_158111420 | SHOX2 | GCTAT others(3473): Show |
chr3 | 158090905 | 158111420 |
| a0001c0001t0008 | 0/0 | 3478 | 5 | 0 | 3 | 0 | 0 | 2 | SHOX2_chr3_158090905_158111420 | SHOX2 | GCTAT others(3473): Show |
chr3 | 158090905 | 158111420 |
| a0001c0001t0010 | 0/0 | 3481 | 4 | 4 | 0 | 0 | 0 | 0 | SHOX2_chr3_158090905_158111420 | SHOX2 | GCTAT others(3476): Show |
chr3 | 158090905 | 158111420 |
| a0001c0001t0011 | 0/0 | 3478 | 2 | 2 | 0 | 0 | 0 | 0 | SHOX2_chr3_158090905_158111420 | SHOX2 | GCTAT others(3473): Show |
chr3 | 158090905 | 158111420 |
| a0001c0001t0012 | 0/0 | 3479 | 2 | 0 | 0 | 2 | 0 | 0 | SHOX2_chr3_158090905_158111420 | SHOX2 | GCTAT others(3474): Show |
chr3 | 158090905 | 158111420 |
| a0001c0001t0013 | 0/0 | 3518 | 2 | 2 | 0 | 0 | 0 | 0 | SHOX2_chr3_158090905_158111420 | SHOX2 | GCTAT others(3513): Show |
chr3 | 158090905 | 158111420 |
| a0001c0001t0014 | 0/0 | 3514 | 2 | 2 | 0 | 0 | 0 | 0 | SHOX2_chr3_158090905_158111420 | SHOX2 | GCTAT others(3509): Show |
chr3 | 158090905 | 158111420 |
| a0001c0001t0015 | 0/0 | 3478 | 2 | 0 | 2 | 0 | 0 | 0 | SHOX2_chr3_158090905_158111420 | SHOX2 | GCTAT others(3473): Show |
chr3 | 158090905 | 158111420 |
| a0001c0001t0016 | 0/0 | 3514 | 1 | 1 | 0 | 0 | 0 | 0 | SHOX2_chr3_158090905_158111420 | SHOX2 | GCTAT others(3509): Show |
chr3 | 158090905 | 158111420 |
| a0001c0001t0017 | 0/0 | 3508 | 1 | 0 | 1 | 0 | 0 | 0 | SHOX2_chr3_158090905_158111420 | SHOX2 | GCTAT others(3503): Show |
chr3 | 158090905 | 158111420 |
| a0001c0001t0018 | 0/0 | 3508 | 1 | 1 | 0 | 0 | 0 | 0 | SHOX2_chr3_158090905_158111420 | SHOX2 | GCTAT others(3503): Show |
chr3 | 158090905 | 158111420 |
| a0001c0001t0019 | 0/0 | 3512 | 1 | 1 | 0 | 0 | 0 | 0 | SHOX2_chr3_158090905_158111420 | SHOX2 | GCTAT others(3507): Show |
chr3 | 158090905 | 158111420 |
| a0001c0001t0020 | 0/0 | 3556 | 1 | 1 | 0 | 0 | 0 | 0 | SHOX2_chr3_158090905_158111420 | SHOX2 | GCTAT others(3551): Show |
chr3 | 158090905 | 158111420 |
| a0001c0001t0021 | 0/1 | 3491 | 1 | 0 | 0 | 0 | 0 | 0 | SHOX2_chr3_158090905_158111420 | SHOX2 | GCTAT others(3486): Show |
chr3 | 158090905 | 158111420 |
| a0001c0001t0023 | 0/0 | 3478 | 1 | 1 | 0 | 0 | 0 | 0 | SHOX2_chr3_158090905_158111420 | SHOX2 | GCTAT others(3473): Show |
chr3 | 158090905 | 158111420 |
| a0001c0001t0024 | 0/0 | 3478 | 1 | 1 | 0 | 0 | 0 | 0 | SHOX2_chr3_158090905_158111420 | SHOX2 | GCTAT others(3473): Show |
chr3 | 158090905 | 158111420 |
| a0001c0001t0025 | 0/0 | 3469 | 1 | 0 | 1 | 0 | 0 | 0 | SHOX2_chr3_158090905_158111420 | SHOX2 | GCTAT others(3464): Show |
chr3 | 158090905 | 158111420 |
| a0001c0001t0026 | 0/0 | 3468 | 1 | 0 | 1 | 0 | 0 | 0 | SHOX2_chr3_158090905_158111420 | SHOX2 | GCTAT others(3463): Show |
chr3 | 158090905 | 158111420 |
| a0001c0001t0027 | 0/0 | 3464 | 1 | 1 | 0 | 0 | 0 | 0 | SHOX2_chr3_158090905_158111420 | SHOX2 | GCTAT others(3459): Show |
chr3 | 158090905 | 158111420 |
| a0001c0001t0028 | 0/0 | 3499 | 1 | 1 | 0 | 0 | 0 | 0 | SHOX2_chr3_158090905_158111420 | SHOX2 | GCTAT others(3494): Show |
chr3 | 158090905 | 158111420 |
| a0001c0001t0029 | 0/0 | 3495 | 1 | 1 | 0 | 0 | 0 | 0 | SHOX2_chr3_158090905_158111420 | SHOX2 | GCTAT others(3490): Show |
chr3 | 158090905 | 158111420 |
| a0001c0001t0030 | 0/0 | 3458 | 1 | 0 | 0 | 1 | 0 | 0 | SHOX2_chr3_158090905_158111420 | SHOX2 | GCTAT others(3453): Show |
chr3 | 158090905 | 158111420 |
| a0001c0001t0032 | 0/0 | 3530 | 1 | 1 | 0 | 0 | 0 | 0 | SHOX2_chr3_158090905_158111420 | SHOX2 | GCTAT others(3525): Show |
chr3 | 158090905 | 158111420 |
| a0001c0001t0033 | 0/0 | 3512 | 1 | 1 | 0 | 0 | 0 | 0 | SHOX2_chr3_158090905_158111420 | SHOX2 | GCTAT others(3507): Show |
chr3 | 158090905 | 158111420 |
| a0001c0001t0034 | 0/0 | 3512 | 1 | 1 | 0 | 0 | 0 | 0 | SHOX2_chr3_158090905_158111420 | SHOX2 | GCTAT others(3507): Show |
chr3 | 158090905 | 158111420 |
| a0001c0001t0035 | 0/0 | 3475 | 1 | 0 | 0 | 1 | 0 | 0 | SHOX2_chr3_158090905_158111420 | SHOX2 | GCTAT others(3470): Show |
chr3 | 158090905 | 158111420 |
| a0001c0001t0036 | 0/0 | 3478 | 1 | 1 | 0 | 0 | 0 | 0 | SHOX2_chr3_158090905_158111420 | SHOX2 | GCTAT others(3473): Show |
chr3 | 158090905 | 158111420 |
| a0001c0002t0009 | 0/0 | 3478 | 4 | 0 | 0 | 3 | 0 | 1 | SHOX2_chr3_158090905_158111420 | SHOX2 | GCTAT others(3473): Show |
chr3 | 158090905 | 158111420 |
| a0001c0002t0038 | 0/0 | 3478 | 1 | 0 | 0 | 0 | 0 | 1 | SHOX2_chr3_158090905_158111420 | SHOX2 | GCTAT others(3473): Show |
chr3 | 158090905 | 158111420 |
| a0001c0007t0031 | 0/0 | 3478 | 1 | 0 | 0 | 1 | 0 | 0 | SHOX2_chr3_158090905_158111420 | SHOX2 | GCTAT others(3473): Show |
chr3 | 158090905 | 158111420 |
| a0001c0008t0022 | 0/0 | 3478 | 1 | 0 | 0 | 1 | 0 | 0 | SHOX2_chr3_158090905_158111420 | SHOX2 | GCTAT others(3473): Show |
chr3 | 158090905 | 158111420 |
| a0001c0009t0003 | 0/0 | 3478 | 1 | 0 | 0 | 1 | 0 | 0 | SHOX2_chr3_158090905_158111420 | SHOX2 | GCTAT others(3473): Show |
chr3 | 158090905 | 158111420 |
| a0002c0003t0001 | 0/0 | 3478 | 4 | 0 | 0 | 4 | 0 | 0 | SHOX2_chr3_158090905_158111420 | SHOX2 | GCTAT others(3473): Show |
chr3 | 158090905 | 158111420 |
| a0003c0006t0003 | 0/0 | 3490 | 1 | 1 | 0 | 0 | 0 | 0 | SHOX2_chr3_158090905_158111420 | SHOX2 | GCTAT others(3485): Show |
chr3 | 158090905 | 158111420 |
| a0004c0004t0037 | 0/0 | 3466 | 1 | 0 | 0 | 0 | 0 | 1 | SHOX2_chr3_158090905_158111420 | SHOX2 | GCTAT others(3461): Show |
chr3 | 158090905 | 158111420 |
| a0005c0005t0007 | 0/0 | 3457 | 1 | 0 | 0 | 1 | 0 | 0 | SHOX2_chr3_158090905_158111420 | SHOX2 | GCTAT others(3452): Show |
chr3 | 158090905 | 158111420 |
| actghapid | grch38/chm13v2 | total | AFR | AMR | EAS | EUR | SAS | regionname | genename | chr | start | end |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| a0001c0001t0001g0002 | 0/0 | 45 | 2 | 11 | 24 | 2 | 6 | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| a0001c0001t0001g0003 | 0/0 | 25 | 1 | 3 | 14 | 2 | 5 | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| a0001c0001t0001g0007 | 0/0 | 14 | 2 | 0 | 8 | 0 | 4 | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| a0001c0001t0001g0010 | 0/0 | 7 | 0 | 4 | 0 | 0 | 3 | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| a0001c0001t0001g0015 | 0/0 | 3 | 0 | 0 | 3 | 0 | 0 | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| a0001c0001t0001g0017 | 0/0 | 3 | 0 | 0 | 0 | 3 | 0 | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| a0001c0001t0001g0018 | 0/0 | 3 | 0 | 0 | 3 | 0 | 0 | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| a0001c0001t0001g0025 | 0/0 | 2 | 0 | 0 | 2 | 0 | 0 | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| a0001c0001t0001g0027 | 0/0 | 2 | 0 | 0 | 2 | 0 | 0 | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| a0001c0001t0001g0048 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| a0001c0001t0001g0049 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| a0001c0001t0001g0051 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| a0001c0001t0001g0078 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| a0001c0001t0001g0079 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| a0001c0001t0002g0001 | 0/0 | 98 | 12 | 16 | 60 | 2 | 8 | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| a0001c0001t0002g0022 | 0/0 | 2 | 0 | 2 | 0 | 0 | 0 | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| a0001c0001t0002g0028 | 0/0 | 2 | 0 | 0 | 2 | 0 | 0 | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| a0001c0001t0002g0032 | 0/0 | 2 | 0 | 0 | 0 | 0 | 2 | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| a0001c0001t0002g0069 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| a0001c0001t0002g0073 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| a0001c0001t0002g0074 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| a0001c0001t0002g0080 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| a0001c0001t0003g0004 | 0/0 | 25 | 9 | 9 | 0 | 4 | 3 | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| a0001c0001t0003g0005 | 0/0 | 19 | 17 | 2 | 0 | 0 | 0 | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| a0001c0001t0003g0013 | 0/0 | 4 | 4 | 0 | 0 | 0 | 0 | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| a0001c0001t0003g0019 | 0/0 | 3 | 2 | 1 | 0 | 0 | 0 | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| a0001c0001t0003g0023 | 0/0 | 2 | 2 | 0 | 0 | 0 | 0 | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| a0001c0001t0003g0024 | 0/0 | 2 | 0 | 0 | 2 | 0 | 0 | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| a0001c0001t0003g0052 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| a0001c0001t0003g0054 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| a0001c0001t0003g0062 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| a0001c0001t0003g0070 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| a0001c0001t0003g0075 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| a0001c0001t0004g0006 | 0/0 | 15 | 0 | 5 | 7 | 2 | 1 | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| a0001c0001t0004g0026 | 0/0 | 2 | 0 | 0 | 2 | 0 | 0 | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| a0001c0001t0004g0031 | 0/0 | 2 | 2 | 0 | 0 | 0 | 0 | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| a0001c0001t0004g0050 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| a0001c0001t0004g0061 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| a0001c0001t0004g0067 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| a0001c0001t0005g0008 | 0/0 | 8 | 0 | 1 | 0 | 0 | 7 | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| a0001c0001t0005g0011 | 1/0 | 6 | 1 | 3 | 0 | 1 | 0 | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| a0001c0001t0005g0021 | 0/0 | 2 | 0 | 2 | 0 | 0 | 0 | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| a0001c0001t0006g0009 | 0/0 | 7 | 7 | 0 | 0 | 0 | 0 | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| a0001c0001t0006g0076 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| a0001c0001t0007g0016 | 0/0 | 3 | 0 | 0 | 3 | 0 | 0 | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| a0001c0001t0007g0047 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| a0001c0001t0008g0014 | 0/0 | 4 | 0 | 2 | 0 | 0 | 2 | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| a0001c0001t0008g0083 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| a0001c0001t0010g0036 | 0/0 | 2 | 2 | 0 | 0 | 0 | 0 | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| a0001c0001t0010g0084 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| a0001c0001t0010g0085 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| a0001c0001t0011g0034 | 0/0 | 2 | 2 | 0 | 0 | 0 | 0 | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| a0001c0001t0012g0033 | 0/0 | 2 | 0 | 0 | 2 | 0 | 0 | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| a0001c0001t0013g0029 | 0/0 | 2 | 2 | 0 | 0 | 0 | 0 | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| a0001c0001t0014g0030 | 0/0 | 2 | 2 | 0 | 0 | 0 | 0 | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| a0001c0001t0015g0035 | 0/0 | 2 | 0 | 2 | 0 | 0 | 0 | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| a0001c0001t0016g0037 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| a0001c0001t0017g0038 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| a0001c0001t0018g0039 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| a0001c0001t0019g0040 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| a0001c0001t0020g0041 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| a0001c0001t0021g0063 | 0/1 | 1 | 0 | 0 | 0 | 0 | 0 | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| a0001c0001t0023g0064 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| a0001c0001t0024g0065 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| a0001c0001t0025g0066 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| a0001c0001t0026g0071 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| a0001c0001t0027g0072 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| a0001c0001t0028g0055 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| a0001c0001t0029g0056 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| a0001c0001t0030g0046 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| a0001c0001t0032g0057 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| a0001c0001t0033g0058 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| a0001c0001t0034g0059 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| a0001c0001t0035g0060 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| a0001c0001t0036g0077 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| a0001c0002t0009g0020 | 0/0 | 3 | 0 | 0 | 3 | 0 | 0 | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| a0001c0002t0009g0081 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| a0001c0002t0038g0082 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| a0001c0007t0031g0045 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| a0001c0008t0022g0053 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| a0001c0009t0003g0068 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| a0002c0003t0001g0012 | 0/0 | 4 | 0 | 0 | 4 | 0 | 0 | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| a0003c0006t0003g0044 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| a0004c0004t0037g0042 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| a0005c0005t0007g0043 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| sampleid | ID haplotypeid
|
ahapid | chapid | thapid | ghapid | gpopname | popname | regionname | genename | chr | start | end |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| HG00099 | hp1 | a0001 | c0001 | t0003 | g0004 | EUR | GBR | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| HG00099 | hp2 | a0001 | c0001 | t0002 | g0001 | EUR | GBR | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| HG00140 | hp1 | a0001 | c0001 | t0001 | g0017 | EUR | GBR | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| HG00140 | hp2 | a0001 | c0001 | t0001 | g0002 | EUR | GBR | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| HG00323 | hp1 | a0001 | c0001 | t0001 | g0003 | EUR | FIN | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| HG00323 | hp2 | a0001 | c0001 | t0004 | g0006 | EUR | FIN | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| HG00408 | hp1 | a0001 | c0001 | t0004 | g0006 | EAS | CHS | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| HG00408 | hp2 | a0001 | c0001 | t0002 | g0001 | EAS | CHS | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| HG00423 | hp1 | a0001 | c0001 | t0004 | g0061 | EAS | CHS | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| HG00423 | hp2 | a0001 | c0001 | t0001 | g0002 | EAS | CHS | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| HG00544 | hp1 | a0001 | c0001 | t0001 | g0003 | EAS | CHS | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| HG00544 | hp2 | a0001 | c0001 | t0001 | g0015 | EAS | CHS | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| HG00558 | hp1 | a0001 | c0001 | t0002 | g0001 | EAS | CHS | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| HG00558 | hp2 | a0001 | c0001 | t0001 | g0002 | EAS | CHS | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| HG00609 | hp1 | a0001 | c0001 | t0002 | g0001 | EAS | CHS | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| HG00609 | hp2 | a0001 | c0001 | t0004 | g0026 | EAS | CHS | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| HG00621 | hp1 | a0001 | c0001 | t0002 | g0001 | EAS | CHS | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| HG00621 | hp2 | a0001 | c0001 | t0001 | g0018 | EAS | CHS | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| HG00639 | hp1 | a0001 | c0001 | t0003 | g0004 | AMR | PUR | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| HG00639 | hp2 | a0001 | c0001 | t0001 | g0010 | AMR | PUR | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| HG00642 | hp1 | a0001 | c0001 | t0003 | g0004 | AMR | PUR | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| HG00642 | hp2 | a0001 | c0001 | t0001 | g0003 | AMR | PUR | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| HG00733 | hp1 | a0001 | c0001 | t0002 | g0001 | AMR | PUR | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| HG00733 | hp2 | a0001 | c0001 | t0005 | g0011 | AMR | PUR | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| HG00735 | hp1 | a0001 | c0001 | t0003 | g0004 | AMR | PUR | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| HG00735 | hp2 | a0001 | c0001 | t0008 | g0083 | AMR | PUR | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| HG00738 | hp1 | a0001 | c0001 | t0003 | g0004 | AMR | PUR | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| HG00738 | hp2 | a0001 | c0001 | t0002 | g0001 | AMR | PUR | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| HG00741 | hp1 | a0001 | c0001 | t0003 | g0004 | AMR | PUR | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| HG00741 | hp2 | a0001 | c0001 | t0001 | g0002 | AMR | PUR | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| HG01069 | hp1 | a0001 | c0001 | t0005 | g0021 | AMR | PUR | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| HG01069 | hp2 | a0001 | c0001 | t0017 | g0038 | AMR | PUR | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| HG01070 | hp1 | a0001 | c0001 | t0004 | g0006 | AMR | PUR | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| HG01070 | hp2 | a0001 | c0001 | t0001 | g0010 | AMR | PUR | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| HG01071 | hp1 | a0001 | c0001 | t0004 | g0006 | AMR | PUR | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| HG01071 | hp2 | a0001 | c0001 | t0005 | g0021 | AMR | PUR | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| HG01074 | hp1 | a0001 | c0001 | t0003 | g0004 | AMR | PUR | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| HG01074 | hp2 | a0001 | c0001 | t0002 | g0001 | AMR | PUR | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| HG01081 | hp1 | a0001 | c0001 | t0002 | g0001 | AMR | PUR | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| HG01081 | hp2 | a0001 | c0001 | t0008 | g0014 | AMR | PUR | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| HG01099 | hp1 | a0001 | c0001 | t0008 | g0014 | AMR | PUR | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| HG01099 | hp2 | a0001 | c0001 | t0001 | g0002 | AMR | PUR | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| HG01109 | hp1 | a0001 | c0001 | t0001 | g0002 | AMR | PUR | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| HG01109 | hp2 | a0001 | c0001 | t0003 | g0052 | AMR | PUR | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| HG01175 | hp1 | a0001 | c0001 | t0003 | g0004 | AMR | PUR | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| HG01175 | hp2 | a0001 | c0001 | t0001 | g0002 | AMR | PUR | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| HG01192 | hp1 | a0001 | c0001 | t0004 | g0006 | AMR | PUR | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| HG01192 | hp2 | a0001 | c0001 | t0001 | g0010 | AMR | PUR | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| HG01243 | hp1 | a0001 | c0001 | t0003 | g0005 | AMR | PUR | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| HG01243 | hp2 | a0001 | c0001 | t0003 | g0019 | AMR | PUR | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| HG01255 | hp1 | a0001 | c0001 | t0003 | g0005 | AMR | CLM | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| HG01255 | hp2 | a0001 | c0001 | t0001 | g0002 | AMR | CLM | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| HG01256 | hp1 | a0001 | c0001 | t0001 | g0002 | AMR | CLM | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| HG01256 | hp2 | a0001 | c0001 | t0001 | g0010 | AMR | CLM | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| HG01257 | hp1 | a0001 | c0001 | t0015 | g0035 | AMR | CLM | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| HG01257 | hp2 | a0001 | c0001 | t0026 | g0071 | AMR | CLM | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| HG01261 | hp1 | a0001 | c0001 | t0002 | g0022 | AMR | CLM | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| HG01261 | hp2 | a0001 | c0001 | t0001 | g0002 | AMR | CLM | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| HG01346 | hp1 | a0001 | c0001 | t0005 | g0008 | AMR | CLM | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| HG01346 | hp2 | a0001 | c0001 | t0002 | g0001 | AMR | CLM | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| HG01358 | hp1 | a0001 | c0001 | t0001 | g0002 | AMR | CLM | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| HG01358 | hp2 | a0001 | c0001 | t0005 | g0011 | AMR | CLM | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| HG01361 | hp1 | a0001 | c0001 | t0001 | g0003 | AMR | CLM | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| HG01361 | hp2 | a0001 | c0001 | t0005 | g0011 | AMR | CLM | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| HG01433 | hp1 | a0001 | c0001 | t0002 | g0001 | AMR | CLM | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| HG01433 | hp2 | a0001 | c0001 | t0001 | g0003 | AMR | CLM | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| HG01496 | hp1 | a0001 | c0001 | t0004 | g0006 | AMR | CLM | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| HG01496 | hp2 | a0001 | c0001 | t0002 | g0001 | AMR | CLM | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| HG01515 | hp1 | a0001 | c0001 | t0001 | g0017 | EUR | IBS | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| HG01515 | hp2 | a0001 | c0001 | t0003 | g0004 | EUR | IBS | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| HG01516 | hp1 | a0001 | c0001 | t0003 | g0004 | EUR | IBS | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| HG01516 | hp2 | a0001 | c0001 | t0001 | g0002 | EUR | IBS | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| HG01517 | hp1 | a0001 | c0001 | t0003 | g0004 | EUR | IBS | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| HG01517 | hp2 | a0001 | c0001 | t0001 | g0017 | EUR | IBS | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| HG01884 | hp1 | a0001 | c0001 | t0001 | g0002 | AFR | ACB | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| HG01884 | hp2 | a0001 | c0001 | t0006 | g0076 | AFR | ACB | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| HG01891 | hp1 | a0001 | c0001 | t0034 | g0059 | AFR | ACB | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| HG01891 | hp2 | a0001 | c0001 | t0003 | g0013 | AFR | ACB | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| HG01928 | hp1 | a0001 | c0001 | t0002 | g0001 | AMR | PEL | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| HG01928 | hp2 | a0001 | c0001 | t0002 | g0001 | AMR | PEL | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| HG01934 | hp1 | a0001 | c0001 | t0002 | g0001 | AMR | PEL | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| HG01934 | hp2 | a0001 | c0001 | t0001 | g0002 | AMR | PEL | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| HG01978 | hp1 | a0001 | c0001 | t0025 | g0066 | AMR | PEL | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| HG01978 | hp2 | a0001 | c0001 | t0002 | g0022 | AMR | PEL | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| HG01981 | hp1 | a0001 | c0001 | t0004 | g0006 | AMR | PEL | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| HG01981 | hp2 | a0001 | c0001 | t0002 | g0001 | AMR | PEL | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| HG01993 | hp1 | a0001 | c0001 | t0003 | g0004 | AMR | PEL | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| HG01993 | hp2 | a0001 | c0001 | t0002 | g0001 | AMR | PEL | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| HG02004 | hp1 | a0001 | c0001 | t0002 | g0001 | AMR | PEL | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| HG02004 | hp2 | a0001 | c0001 | t0002 | g0001 | AMR | PEL | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| HG02015 | hp1 | a0001 | c0001 | t0002 | g0001 | EAS | KHV | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| HG02015 | hp2 | a0001 | c0001 | t0001 | g0002 | EAS | KHV | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| HG02027 | hp1 | a0001 | c0001 | t0001 | g0003 | EAS | KHV | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| HG02027 | hp2 | a0001 | c0001 | t0002 | g0001 | EAS | KHV | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| HG02040 | hp1 | a0001 | c0001 | t0001 | g0002 | EAS | KHV | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| HG02040 | hp2 | a0001 | c0001 | t0002 | g0001 | EAS | KHV | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| HG02055 | hp1 | a0001 | c0001 | t0011 | g0034 | AFR | ACB | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| HG02055 | hp2 | a0001 | c0001 | t0003 | g0013 | AFR | ACB | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| HG02056 | hp1 | a0001 | c0001 | t0004 | g0006 | EAS | KHV | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| HG02056 | hp2 | a0001 | c0001 | t0003 | g0024 | EAS | KHV | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| HG02074 | hp1 | a0001 | c0001 | t0002 | g0001 | EAS | KHV | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| HG02074 | hp2 | a0001 | c0001 | t0002 | g0001 | EAS | KHV | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| HG02080 | hp1 | a0001 | c0001 | t0003 | g0024 | EAS | KHV | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| HG02080 | hp2 | a0001 | c0001 | t0001 | g0007 | EAS | KHV | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| HG02129 | hp1 | a0001 | c0001 | t0001 | g0007 | EAS | KHV | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| HG02129 | hp2 | a0001 | c0009 | t0003 | g0068 | EAS | KHV | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| HG02132 | hp1 | a0001 | c0001 | t0001 | g0002 | EAS | KHV | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| HG02132 | hp2 | a0001 | c0001 | t0002 | g0001 | EAS | KHV | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| HG02135 | hp1 | a0001 | c0001 | t0002 | g0001 | EAS | KHV | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| HG02135 | hp2 | a0001 | c0001 | t0002 | g0001 | EAS | KHV | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| HG02145 | hp1 | a0001 | c0001 | t0023 | g0064 | AFR | ACB | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| HG02145 | hp2 | a0001 | c0001 | t0010 | g0036 | AFR | ACB | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| HG02155 | hp1 | a0001 | c0001 | t0002 | g0001 | EAS | CDX | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| HG02155 | hp2 | a0001 | c0001 | t0002 | g0001 | EAS | CDX | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| HG02165 | hp1 | a0001 | c0001 | t0002 | g0001 | EAS | CDX | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| HG02165 | hp2 | a0001 | c0001 | t0001 | g0027 | EAS | CDX | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| HG02257 | hp1 | a0001 | c0001 | t0010 | g0036 | AFR | ACB | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| HG02257 | hp2 | a0001 | c0001 | t0003 | g0019 | AFR | ACB | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| HG02258 | hp1 | a0001 | c0001 | t0014 | g0030 | AFR | ACB | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| HG02258 | hp2 | a0001 | c0001 | t0002 | g0001 | AFR | ACB | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| HG02273 | hp1 | a0001 | c0001 | t0002 | g0001 | AMR | PEL | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| HG02273 | hp2 | a0001 | c0001 | t0015 | g0035 | AMR | PEL | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| HG02280 | hp1 | a0001 | c0001 | t0013 | g0029 | AFR | ACB | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| HG02280 | hp2 | a0001 | c0001 | t0003 | g0005 | AFR | ACB | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| HG02300 | hp1 | a0001 | c0001 | t0001 | g0002 | AMR | PEL | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| HG02300 | hp2 | a0001 | c0001 | t0002 | g0001 | AMR | PEL | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| HG02451 | hp1 | a0001 | c0001 | t0028 | g0055 | AFR | ACB | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| HG02451 | hp2 | a0001 | c0001 | t0003 | g0005 | AFR | ACB | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| HG02523 | hp1 | a0001 | c0001 | t0004 | g0006 | EAS | KHV | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| HG02523 | hp2 | a0001 | c0001 | t0002 | g0001 | EAS | KHV | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| HG02572 | hp1 | a0001 | c0001 | t0001 | g0078 | AFR | GWD | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| HG02572 | hp2 | a0001 | c0001 | t0033 | g0058 | AFR | GWD | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| HG02602 | hp1 | a0001 | c0001 | t0002 | g0001 | SAS | PJL | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| HG02602 | hp2 | a0001 | c0001 | t0002 | g0032 | SAS | PJL | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| HG02615 | hp1 | a0001 | c0001 | t0003 | g0005 | AFR | GWD | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| HG02615 | hp2 | a0001 | c0001 | t0029 | g0056 | AFR | GWD | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| HG02630 | hp1 | a0001 | c0001 | t0002 | g0001 | AFR | GWD | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| HG02630 | hp2 | a0001 | c0001 | t0003 | g0005 | AFR | GWD | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| HG02647 | hp1 | a0001 | c0001 | t0006 | g0009 | AFR | GWD | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| HG02647 | hp2 | a0001 | c0001 | t0003 | g0013 | AFR | GWD | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| HG02683 | hp1 | a0001 | c0001 | t0001 | g0003 | SAS | PJL | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| HG02683 | hp2 | a0001 | c0001 | t0002 | g0001 | SAS | PJL | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| HG02698 | hp1 | a0001 | c0002 | t0038 | g0082 | SAS | PJL | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| HG02698 | hp2 | a0001 | c0001 | t0008 | g0014 | SAS | PJL | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| HG02717 | hp1 | a0001 | c0001 | t0001 | g0007 | AFR | GWD | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| HG02717 | hp2 | a0001 | c0001 | t0010 | g0085 | AFR | GWD | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| HG02735 | hp1 | a0001 | c0001 | t0004 | g0006 | SAS | PJL | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| HG02735 | hp2 | a0001 | c0002 | t0009 | g0081 | SAS | PJL | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| HG02738 | hp1 | a0001 | c0001 | t0001 | g0002 | SAS | PJL | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| HG02738 | hp2 | a0001 | c0001 | t0003 | g0004 | SAS | PJL | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| HG02809 | hp1 | a0001 | c0001 | t0003 | g0004 | AFR | GWD | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| HG02809 | hp2 | a0001 | c0001 | t0003 | g0023 | AFR | GWD | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| HG02818 | hp1 | a0001 | c0001 | t0003 | g0005 | AFR | GWD | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| HG02818 | hp2 | a0001 | c0001 | t0003 | g0005 | AFR | GWD | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| HG02886 | hp1 | a0001 | c0001 | t0006 | g0009 | AFR | GWD | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| HG02886 | hp2 | a0001 | c0001 | t0032 | g0057 | AFR | GWD | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| HG02895 | hp1 | a0001 | c0001 | t0003 | g0005 | AFR | GWD | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| HG02895 | hp2 | a0001 | c0001 | t0006 | g0009 | AFR | GWD | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| HG02896 | hp1 | a0001 | c0001 | t0003 | g0070 | AFR | GWD | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| HG02896 | hp2 | a0001 | c0001 | t0004 | g0031 | AFR | GWD | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| HG02897 | hp1 | a0001 | c0001 | t0006 | g0009 | AFR | GWD | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| HG02897 | hp2 | a0001 | c0001 | t0004 | g0031 | AFR | GWD | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| HG02922 | hp1 | a0001 | c0001 | t0003 | g0004 | AFR | ESN | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| HG02922 | hp2 | a0001 | c0001 | t0006 | g0009 | AFR | ESN | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| HG02965 | hp1 | a0001 | c0001 | t0002 | g0001 | AFR | ESN | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| HG02965 | hp2 | a0001 | c0001 | t0003 | g0005 | AFR | ESN | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| HG02970 | hp1 | a0001 | c0001 | t0003 | g0004 | AFR | ESN | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| HG02970 | hp2 | a0001 | c0001 | t0002 | g0001 | AFR | ESN | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| HG02976 | hp1 | a0001 | c0001 | t0002 | g0001 | AFR | ESN | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| HG02976 | hp2 | a0001 | c0001 | t0003 | g0004 | AFR | ESN | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| HG03017 | hp1 | a0001 | c0001 | t0003 | g0004 | SAS | PJL | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| HG03017 | hp2 | a0001 | c0001 | t0005 | g0008 | SAS | PJL | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| HG03041 | hp1 | a0001 | c0001 | t0003 | g0005 | AFR | GWD | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| HG03041 | hp2 | a0001 | c0001 | t0010 | g0084 | AFR | GWD | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| HG03130 | hp1 | a0001 | c0001 | t0002 | g0001 | AFR | ESN | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| HG03130 | hp2 | a0001 | c0001 | t0018 | g0039 | AFR | ESN | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| HG03139 | hp1 | a0001 | c0001 | t0024 | g0065 | AFR | ESN | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| HG03139 | hp2 | a0001 | c0001 | t0011 | g0034 | AFR | ESN | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| HG03195 | hp1 | a0001 | c0001 | t0003 | g0005 | AFR | ESN | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| HG03195 | hp2 | a0001 | c0001 | t0020 | g0041 | AFR | ESN | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| HG03209 | hp1 | a0001 | c0001 | t0006 | g0009 | AFR | MSL | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| HG03209 | hp2 | a0001 | c0001 | t0003 | g0005 | AFR | MSL | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| HG03225 | hp1 | a0001 | c0001 | t0003 | g0075 | AFR | MSL | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| HG03225 | hp2 | a0001 | c0001 | t0002 | g0001 | AFR | MSL | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| HG03239 | hp1 | a0001 | c0001 | t0003 | g0004 | SAS | PJL | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| HG03239 | hp2 | a0001 | c0001 | t0002 | g0001 | SAS | PJL | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| HG03453 | hp1 | a0001 | c0001 | t0003 | g0004 | AFR | MSL | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| HG03453 | hp2 | a0001 | c0001 | t0002 | g0001 | AFR | MSL | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| HG03486 | hp1 | a0001 | c0001 | t0006 | g0009 | AFR | MSL | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| HG03486 | hp2 | a0001 | c0001 | t0016 | g0037 | AFR | MSL | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| HG03491 | hp1 | a0001 | c0001 | t0001 | g0007 | SAS | PJL | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| HG03491 | hp2 | a0001 | c0001 | t0005 | g0008 | SAS | PJL | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| HG03492 | hp1 | a0001 | c0001 | t0005 | g0008 | SAS | PJL | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| HG03492 | hp2 | a0001 | c0001 | t0008 | g0014 | SAS | PJL | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| HG03516 | hp1 | a0001 | c0001 | t0002 | g0001 | AFR | ESN | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| HG03516 | hp2 | a0001 | c0001 | t0013 | g0029 | AFR | ESN | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| HG03540 | hp1 | a0001 | c0001 | t0003 | g0005 | AFR | GWD | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| HG03540 | hp2 | a0001 | c0001 | t0003 | g0004 | AFR | GWD | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| HG03579 | hp1 | a0003 | c0006 | t0003 | g0044 | AFR | MSL | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| HG03579 | hp2 | a0001 | c0001 | t0003 | g0023 | AFR | MSL | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| HG03654 | hp1 | a0001 | c0001 | t0001 | g0003 | SAS | PJL | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| HG03654 | hp2 | a0001 | c0001 | t0001 | g0002 | SAS | PJL | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| HG03669 | hp1 | a0001 | c0001 | t0001 | g0007 | SAS | PJL | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| HG03669 | hp2 | a0001 | c0001 | t0001 | g0007 | SAS | PJL | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| HG03688 | hp1 | a0001 | c0001 | t0001 | g0003 | SAS | STU | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| HG03688 | hp2 | a0001 | c0001 | t0001 | g0002 | SAS | STU | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| HG03710 | hp1 | a0001 | c0001 | t0002 | g0001 | SAS | PJL | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| HG03710 | hp2 | a0001 | c0001 | t0001 | g0007 | SAS | PJL | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| HG03831 | hp1 | a0001 | c0001 | t0002 | g0001 | SAS | BEB | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| HG03831 | hp2 | a0001 | c0001 | t0001 | g0079 | SAS | BEB | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| HG03834 | hp1 | a0001 | c0001 | t0005 | g0008 | SAS | BEB | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| HG03834 | hp2 | a0001 | c0001 | t0002 | g0001 | SAS | BEB | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| HG03927 | hp1 | a0001 | c0001 | t0005 | g0008 | SAS | BEB | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| HG03927 | hp2 | a0001 | c0001 | t0002 | g0001 | SAS | BEB | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| HG03942 | hp1 | a0001 | c0001 | t0001 | g0002 | SAS | BEB | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| HG03942 | hp2 | a0001 | c0001 | t0001 | g0002 | SAS | BEB | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| HG04115 | hp1 | a0001 | c0001 | t0005 | g0008 | SAS | STU | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| HG04115 | hp2 | a0004 | c0004 | t0037 | g0042 | SAS | STU | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| HG04184 | hp1 | a0001 | c0001 | t0001 | g0010 | SAS | BEB | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| HG04184 | hp2 | a0001 | c0001 | t0002 | g0080 | SAS | BEB | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| HG04199 | hp1 | a0001 | c0001 | t0001 | g0003 | SAS | STU | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| HG04199 | hp2 | a0001 | c0001 | t0001 | g0002 | SAS | STU | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| HG04204 | hp1 | a0001 | c0001 | t0001 | g0010 | SAS | STU | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| HG04204 | hp2 | a0001 | c0001 | t0002 | g0001 | SAS | STU | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| HG04228 | hp1 | a0001 | c0001 | t0005 | g0008 | SAS | STU | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| HG04228 | hp2 | a0001 | c0001 | t0002 | g0032 | SAS | STU | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| NA18522 | hp1 | a0001 | c0001 | t0002 | g0001 | AFR | YRI | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| NA18522 | hp2 | a0001 | c0001 | t0003 | g0004 | AFR | YRI | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| NA18612 | hp1 | a0001 | c0001 | t0001 | g0027 | EAS | CHB | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| NA18612 | hp2 | a0001 | c0001 | t0002 | g0001 | EAS | CHB | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| NA18747 | hp1 | a0001 | c0001 | t0002 | g0001 | EAS | CHB | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| NA18747 | hp2 | a0001 | c0001 | t0007 | g0047 | EAS | CHB | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| NA18906 | hp1 | a0001 | c0001 | t0003 | g0004 | AFR | YRI | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| NA18906 | hp2 | a0001 | c0001 | t0003 | g0005 | AFR | YRI | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| NA18940 | hp1 | a0001 | c0001 | t0002 | g0001 | EAS | JPT | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| NA18940 | hp2 | a0001 | c0001 | t0004 | g0006 | EAS | JPT | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| NA18943 | hp1 | a0001 | c0001 | t0001 | g0015 | EAS | JPT | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| NA18943 | hp2 | a0001 | c0001 | t0012 | g0033 | EAS | JPT | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| NA18944 | hp1 | a0001 | c0001 | t0001 | g0003 | EAS | JPT | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| NA18944 | hp2 | a0001 | c0001 | t0002 | g0001 | EAS | JPT | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| NA18945 | hp1 | a0001 | c0001 | t0002 | g0001 | EAS | JPT | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| NA18945 | hp2 | a0001 | c0002 | t0009 | g0020 | EAS | JPT | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| NA18946 | hp1 | a0001 | c0001 | t0002 | g0001 | EAS | JPT | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| NA18946 | hp2 | a0001 | c0001 | t0001 | g0002 | EAS | JPT | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| NA18948 | hp1 | a0005 | c0005 | t0007 | g0043 | EAS | JPT | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| NA18948 | hp2 | a0001 | c0001 | t0002 | g0001 | EAS | JPT | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| NA18950 | hp1 | a0001 | c0001 | t0002 | g0001 | EAS | JPT | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| NA18950 | hp2 | a0001 | c0001 | t0007 | g0016 | EAS | JPT | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| NA18953 | hp1 | a0001 | c0001 | t0002 | g0001 | EAS | JPT | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| NA18953 | hp2 | a0001 | c0001 | t0001 | g0003 | EAS | JPT | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| NA18954 | hp1 | a0001 | c0001 | t0001 | g0003 | EAS | JPT | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| NA18954 | hp2 | a0001 | c0001 | t0001 | g0002 | EAS | JPT | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| NA18956 | hp1 | a0001 | c0001 | t0002 | g0001 | EAS | JPT | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| NA18956 | hp2 | a0001 | c0001 | t0004 | g0006 | EAS | JPT | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| NA18959 | hp1 | a0001 | c0001 | t0002 | g0001 | EAS | JPT | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| NA18959 | hp2 | a0001 | c0001 | t0001 | g0018 | EAS | JPT | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| NA18960 | hp1 | a0001 | c0001 | t0002 | g0001 | EAS | JPT | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| NA18960 | hp2 | a0001 | c0001 | t0002 | g0001 | EAS | JPT | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| NA18961 | hp1 | a0001 | c0001 | t0001 | g0049 | EAS | JPT | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| NA18961 | hp2 | a0001 | c0001 | t0002 | g0001 | EAS | JPT | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| NA18962 | hp1 | a0001 | c0001 | t0001 | g0003 | EAS | JPT | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| NA18962 | hp2 | a0001 | c0001 | t0002 | g0001 | EAS | JPT | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| NA18963 | hp1 | a0001 | c0001 | t0002 | g0001 | EAS | JPT | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| NA18963 | hp2 | a0002 | c0003 | t0001 | g0012 | EAS | JPT | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| NA18965 | hp1 | a0001 | c0001 | t0002 | g0001 | EAS | JPT | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| NA18965 | hp2 | a0001 | c0007 | t0031 | g0045 | EAS | JPT | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| NA18966 | hp1 | a0001 | c0001 | t0002 | g0001 | EAS | JPT | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| NA18966 | hp2 | a0001 | c0001 | t0001 | g0002 | EAS | JPT | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| NA18967 | hp1 | a0001 | c0001 | t0001 | g0007 | EAS | JPT | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| NA18967 | hp2 | a0001 | c0001 | t0002 | g0001 | EAS | JPT | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| NA18968 | hp1 | a0001 | c0001 | t0002 | g0001 | EAS | JPT | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| NA18968 | hp2 | a0001 | c0001 | t0001 | g0002 | EAS | JPT | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| NA18973 | hp1 | a0001 | c0001 | t0002 | g0001 | EAS | JPT | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| NA18973 | hp2 | a0002 | c0003 | t0001 | g0012 | EAS | JPT | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| NA18975 | hp1 | a0001 | c0001 | t0001 | g0002 | EAS | JPT | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| NA18975 | hp2 | a0001 | c0001 | t0012 | g0033 | EAS | JPT | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| NA18977 | hp1 | a0001 | c0001 | t0001 | g0007 | EAS | JPT | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| NA18977 | hp2 | a0001 | c0001 | t0001 | g0002 | EAS | JPT | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| NA18979 | hp1 | a0001 | c0001 | t0001 | g0003 | EAS | JPT | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| NA18979 | hp2 | a0001 | c0001 | t0030 | g0046 | EAS | JPT | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| NA18982 | hp1 | a0001 | c0001 | t0001 | g0007 | EAS | JPT | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| NA18982 | hp2 | a0001 | c0001 | t0001 | g0007 | EAS | JPT | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| NA18983 | hp1 | a0001 | c0001 | t0002 | g0001 | EAS | JPT | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| NA18983 | hp2 | a0001 | c0001 | t0004 | g0006 | EAS | JPT | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| NA18984 | hp1 | a0001 | c0001 | t0001 | g0015 | EAS | JPT | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| NA18984 | hp2 | a0001 | c0001 | t0001 | g0003 | EAS | JPT | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| NA18986 | hp1 | a0001 | c0001 | t0002 | g0001 | EAS | JPT | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| NA18986 | hp2 | a0001 | c0001 | t0004 | g0006 | EAS | JPT | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| NA18988 | hp1 | a0001 | c0001 | t0001 | g0002 | EAS | JPT | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| NA18988 | hp2 | a0001 | c0001 | t0002 | g0028 | EAS | JPT | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| NA18989 | hp1 | a0001 | c0001 | t0002 | g0001 | EAS | JPT | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| NA18989 | hp2 | a0001 | c0001 | t0001 | g0002 | EAS | JPT | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| NA18990 | hp1 | a0001 | c0001 | t0002 | g0001 | EAS | JPT | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| NA18990 | hp2 | a0001 | c0001 | t0001 | g0003 | EAS | JPT | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| NA18991 | hp1 | a0001 | c0001 | t0002 | g0001 | EAS | JPT | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| NA18991 | hp2 | a0001 | c0001 | t0004 | g0067 | EAS | JPT | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| NA18995 | hp1 | a0001 | c0001 | t0002 | g0001 | EAS | JPT | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| NA18995 | hp2 | a0001 | c0001 | t0001 | g0002 | EAS | JPT | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| NA19000 | hp1 | a0001 | c0001 | t0002 | g0028 | EAS | JPT | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| NA19000 | hp2 | a0001 | c0001 | t0001 | g0002 | EAS | JPT | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| NA19001 | hp1 | a0001 | c0001 | t0007 | g0016 | EAS | JPT | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| NA19001 | hp2 | a0001 | c0001 | t0035 | g0060 | EAS | JPT | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| NA19006 | hp1 | a0001 | c0001 | t0001 | g0051 | EAS | JPT | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| NA19006 | hp2 | a0001 | c0001 | t0002 | g0074 | EAS | JPT | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| NA19007 | hp1 | a0001 | c0001 | t0001 | g0002 | EAS | JPT | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| NA19007 | hp2 | a0001 | c0001 | t0001 | g0002 | EAS | JPT | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| NA19009 | hp1 | a0001 | c0001 | t0002 | g0001 | EAS | JPT | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| NA19009 | hp2 | a0001 | c0001 | t0001 | g0003 | EAS | JPT | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| NA19010 | hp1 | a0001 | c0001 | t0002 | g0073 | EAS | JPT | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| NA19010 | hp2 | a0001 | c0001 | t0002 | g0001 | EAS | JPT | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| NA19011 | hp1 | a0001 | c0001 | t0001 | g0003 | EAS | JPT | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| NA19011 | hp2 | a0001 | c0001 | t0001 | g0002 | EAS | JPT | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| NA19030 | hp1 | a0001 | c0001 | t0001 | g0007 | AFR | LWK | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| NA19030 | hp2 | a0001 | c0001 | t0003 | g0004 | AFR | LWK | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| NA19043 | hp1 | a0001 | c0001 | t0003 | g0019 | AFR | LWK | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| NA19043 | hp2 | a0001 | c0001 | t0003 | g0005 | AFR | LWK | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| NA19054 | hp1 | a0001 | c0001 | t0002 | g0001 | EAS | JPT | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| NA19054 | hp2 | a0001 | c0001 | t0001 | g0002 | EAS | JPT | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| NA19055 | hp1 | a0001 | c0001 | t0002 | g0001 | EAS | JPT | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| NA19055 | hp2 | a0001 | c0001 | t0004 | g0050 | EAS | JPT | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| NA19057 | hp1 | a0001 | c0001 | t0002 | g0001 | EAS | JPT | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| NA19057 | hp2 | a0001 | c0001 | t0001 | g0002 | EAS | JPT | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| NA19058 | hp1 | a0001 | c0001 | t0002 | g0001 | EAS | JPT | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| NA19058 | hp2 | a0001 | c0001 | t0001 | g0007 | EAS | JPT | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| NA19060 | hp1 | a0001 | c0001 | t0002 | g0001 | EAS | JPT | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| NA19060 | hp2 | a0002 | c0003 | t0001 | g0012 | EAS | JPT | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| NA19064 | hp1 | a0001 | c0001 | t0002 | g0001 | EAS | JPT | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| NA19064 | hp2 | a0001 | c0001 | t0001 | g0003 | EAS | JPT | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| NA19065 | hp1 | a0001 | c0001 | t0001 | g0002 | EAS | JPT | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| NA19065 | hp2 | a0001 | c0001 | t0002 | g0001 | EAS | JPT | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| NA19070 | hp1 | a0001 | c0001 | t0001 | g0007 | EAS | JPT | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| NA19070 | hp2 | a0001 | c0001 | t0002 | g0001 | EAS | JPT | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| NA19074 | hp1 | a0001 | c0001 | t0002 | g0001 | EAS | JPT | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| NA19074 | hp2 | a0001 | c0001 | t0001 | g0018 | EAS | JPT | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| NA19077 | hp1 | a0001 | c0001 | t0001 | g0048 | EAS | JPT | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| NA19077 | hp2 | a0001 | c0001 | t0004 | g0026 | EAS | JPT | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| NA19078 | hp1 | a0001 | c0008 | t0022 | g0053 | EAS | JPT | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| NA19078 | hp2 | a0001 | c0001 | t0002 | g0001 | EAS | JPT | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| NA19079 | hp1 | a0001 | c0001 | t0001 | g0002 | EAS | JPT | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| NA19079 | hp2 | a0001 | c0001 | t0001 | g0025 | EAS | JPT | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| NA19080 | hp1 | a0001 | c0002 | t0009 | g0020 | EAS | JPT | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| NA19080 | hp2 | a0001 | c0001 | t0001 | g0003 | EAS | JPT | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| NA19083 | hp1 | a0001 | c0001 | t0002 | g0069 | EAS | JPT | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| NA19083 | hp2 | a0001 | c0001 | t0001 | g0025 | EAS | JPT | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| NA19084 | hp1 | a0001 | c0001 | t0003 | g0054 | EAS | JPT | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| NA19084 | hp2 | a0001 | c0001 | t0001 | g0003 | EAS | JPT | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| NA19085 | hp1 | a0002 | c0003 | t0001 | g0012 | EAS | JPT | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| NA19085 | hp2 | a0001 | c0001 | t0002 | g0001 | EAS | JPT | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| NA19086 | hp1 | a0001 | c0001 | t0002 | g0001 | EAS | JPT | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| NA19086 | hp2 | a0001 | c0002 | t0009 | g0020 | EAS | JPT | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| NA19087 | hp1 | a0001 | c0001 | t0002 | g0001 | EAS | JPT | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| NA19087 | hp2 | a0001 | c0001 | t0001 | g0002 | EAS | JPT | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| NA19088 | hp1 | a0001 | c0001 | t0001 | g0002 | EAS | JPT | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| NA19088 | hp2 | a0001 | c0001 | t0007 | g0016 | EAS | JPT | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| NA19089 | hp1 | a0001 | c0001 | t0002 | g0001 | EAS | JPT | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| NA19089 | hp2 | a0001 | c0001 | t0002 | g0001 | EAS | JPT | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| NA19240 | hp1 | a0001 | c0001 | t0003 | g0005 | AFR | YRI | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| NA19240 | hp2 | a0001 | c0001 | t0014 | g0030 | AFR | YRI | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| NA20129 | hp1 | a0001 | c0001 | t0002 | g0001 | AFR | ASW | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| NA20129 | hp2 | a0001 | c0001 | t0019 | g0040 | AFR | ASW | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| NA20752 | hp1 | a0001 | c0001 | t0001 | g0003 | EUR | TSI | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| NA20752 | hp2 | a0001 | c0001 | t0004 | g0006 | EUR | TSI | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| NA20805 | hp1 | a0001 | c0001 | t0005 | g0011 | EUR | TSI | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| NA20805 | hp2 | a0001 | c0001 | t0002 | g0001 | EUR | TSI | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| NA20905 | hp1 | a0001 | c0001 | t0001 | g0003 | SAS | GIH | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| NA20905 | hp2 | a0001 | c0001 | t0001 | g0010 | SAS | GIH | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| HG01123 | hp1 | a0001 | c0001 | t0001 | g0002 | AMR | CLM | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| HG01123 | hp2 | a0001 | c0001 | t0003 | g0004 | AMR | CLM | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| HG02486 | hp1 | a0001 | c0001 | t0003 | g0062 | AFR | ACB | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| HG02486 | hp2 | a0001 | c0001 | t0027 | g0072 | AFR | ACB | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| HG02559 | hp1 | a0001 | c0001 | t0001 | g0002 | AFR | ACB | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| HG02559 | hp2 | a0001 | c0001 | t0002 | g0001 | AFR | ACB | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| HG03471 | hp1 | a0001 | c0001 | t0003 | g0013 | AFR | MSL | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| HG03471 | hp2 | a0001 | c0001 | t0003 | g0005 | AFR | MSL | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| HG06807 | hp1 | a0001 | c0001 | t0003 | g0005 | AFR | USA | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| HG06807 | hp2 | a0001 | c0001 | t0005 | g0011 | AFR | USA | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| NA21309 | hp1 | a0001 | c0001 | t0036 | g0077 | AFR | LWK | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| NA21309 | hp2 | a0001 | c0001 | t0001 | g0003 | AFR | LWK | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| homoSapiens | chm13v2 | a0001 | c0001 | t0021 | g0063 | REF | REF | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| homoSapiens | grch38p0 | a0001 | c0001 | t0005 | g0011 | REF | REF | SHOX2_chr3_158090905_158111420 | SHOX2 | chr3 | 158090905 | 158111420 |
| view | chr:pos | ref | alt | # # of ahapid:amino-acid(protein) level |
ahapids | # # of haplotypeids |
haplotypeids | annotation | impact | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length |
cds cds pos length |
aa aa pos length |
distance | status | chr | pos |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| chr3:158105753 | C | G | 1 | a0002 | 4 | NA18963.hp2 NA18973.hp2 NA19060.hp2 others(1): Show |
missense_variant | MODERATE | c.272G>C | p.Arg91Pro | SHOX2 | ENSG00000168779.21 | transcript | ENST00000483851.7 | protein_coding | 1/5 | 668/3478 | 272/960 | 91/319 | chr3 | 158105753 | |||
| chr3:158105764 | A | AGCTCCTC others(5): Show |
1 | a0003 | 1 | HG03579.hp1 | disruptive_inframe_insertion | MODERATE | c.249_260dupAGGCGGAG others(4): Show |
p.Ala87_Gly88insGlyG others(8): Show |
SHOX2 | ENSG00000168779.21 | transcript | ENST00000483851.7 | protein_coding | 1/5 | 656/3478 | 260/960 | 87/319 | chr3 | 158105764 | |||
| chr3:158105797 | TCCTCCGC others(14): Show |
T | 1 | a0005 | 1 | NA18948.hp1 | disruptive_inframe_deletion | MODERATE | c.207_227delCGGCGGCG others(13): Show |
p.Gly70_Gly76del | SHOX2 | ENSG00000168779.21 | transcript | ENST00000483851.7 | protein_coding | 1/5 | 623/3478 | 207/960 | 69/319 | chr3 | 158105797 | |||
| chr3:158105827 | TCCTCCGC others(5): Show |
T | 1 | a0004 | 1 | HG04115.hp2 | disruptive_inframe_deletion | MODERATE | c.186_197delCGGCGGCG others(4): Show |
p.Gly63_Gly66del | SHOX2 | ENSG00000168779.21 | transcript | ENST00000483851.7 | protein_coding | 1/5 | 593/3478 | 186/960 | 62/319 | chr3 | 158105827 |
| view | chr:pos | ref | alt | # # of chapid |
chapids | # # of haplotypeids |
haplotypeids | annotation | impact | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length |
cds cds pos length |
aa aa pos length |
distance | status | chr | pos |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| chr3:158098051 | C | T | 1 | a0001c0008 | 1 | NA19078.hp1 | synonymous_variant | LOW | c.936G>A | p.Lys312Lys | SHOX2 | ENSG00000168779.21 | transcript | ENST00000483851.7 | protein_coding | 5/5 | 1332/3478 | 936/960 | 312/319 | chr3 | 158098051 | |||
| chr3:158098135 | G | C | 1 | a0001c0002 | 5 | HG02698.hp1 HG02735.hp2 NA18945.hp2 others(2): Show |
synonymous_variant | LOW | c.852C>G | p.Ala284Ala | SHOX2 | ENSG00000168779.21 | transcript | ENST00000483851.7 | protein_coding | 5/5 | 1248/3478 | 852/960 | 284/319 | chr3 | 158098135 | |||
| chr3:158099932 | G | A | 1 | a0001c0009 | 1 | HG02129.hp2 | synonymous_variant | LOW | c.630C>T | p.Ala210Ala | SHOX2 | ENSG00000168779.21 | transcript | ENST00000483851.7 | protein_coding | 4/5 | 1026/3478 | 630/960 | 210/319 | chr3 | 158099932 | |||
| chr3:158105749 | A | G | 1 | a0001c0007 | 1 | NA18965.hp2 | synonymous_variant | LOW | c.276T>C | p.Ser92Ser | SHOX2 | ENSG00000168779.21 | transcript | ENST00000483851.7 | protein_coding | 1/5 | 672/3478 | 276/960 | 92/319 | chr3 | 158105749 |
| view | chr:pos | ref | alt | # # of thapid:transcript level |
thapids | # # of haplotypeids |
haplotypeids | annotation | impact | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length |
cds cds pos length |
aa aa pos length |
distance | status | chr | pos |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| chr3:158095916 | T | C | 1 | a0001c0007t0031 | 1 | NA18965.hp2 | 3_prime_UTR_variant | MODIFIER | c.*2111A>G | SHOX2 | ENSG00000168779.21 | transcript | ENST00000483851.7 | protein_coding | 5/5 | 2111 | chr3 | 158095916 | ||||||
| chr3:158096310 | C | T | 1 | a0001c0001t0036 | 1 | NA21309.hp1 | 3_prime_UTR_variant | MODIFIER | c.*1717G>A | SHOX2 | ENSG00000168779.21 | transcript | ENST00000483851.7 | protein_coding | 5/5 | 1717 | chr3 | 158096310 | ||||||
| chr3:158096334 | G | A | 1 | a0001c0001t0018 | 1 | HG03130.hp2 | 3_prime_UTR_variant | MODIFIER | c.*1693C>T | SHOX2 | ENSG00000168779.21 | transcript | ENST00000483851.7 | protein_coding | 5/5 | 1693 | chr3 | 158096334 | ||||||
| chr3:158096392 | T | G | 1 | a0001c0001t0011 | 2 | HG02055.hp1 HG03139.hp2 |
3_prime_UTR_variant | MODIFIER | c.*1635A>C | SHOX2 | ENSG00000168779.21 | transcript | ENST00000483851.7 | protein_coding | 5/5 | 1635 | chr3 | 158096392 | ||||||
| chr3:158096410 | G | GA | 4 | a0001c0001t0002 a0001c0001t0006 a0001c0001t0012 others(1): Show |
119 | HG00099.hp2 HG00408.hp2 HG00558.hp1 others(116): Show |
3_prime_UTR_variant | MODIFIER | c.*1616dupT | SHOX2 | ENSG00000168779.21 | transcript | ENST00000483851.7 | protein_coding | 5/5 | 1616 | chr3 | 158096410 | ||||||
| chr3:158096438 | AAAC | A | 4 | a0001c0001t0004 a0001c0001t0028 a0001c0001t0029 others(1): Show |
25 | HG00323.hp2 HG00408.hp1 HG00423.hp1 others(22): Show |
3_prime_UTR_variant | MODIFIER | c.*1586_*1588delGTT | SHOX2 | ENSG00000168779.21 | transcript | ENST00000483851.7 | protein_coding | 5/5 | 1586 | chr3 | 158096438 | ||||||
| chr3:158096441 | C | CA | 19 | a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(16): Show |
144 | HG00140.hp1 HG00140.hp2 HG00323.hp1 others(141): Show |
3_prime_UTR_variant | MODIFIER | c.*1585dupT | SHOX2 | ENSG00000168779.21 | transcript | ENST00000483851.7 | protein_coding | 5/5 | 1585 | chr3 | 158096441 | ||||||
| chr3:158096441 | CA | C | 1 | a0001c0001t0003 | 5 | HG01243.hp1 HG02280.hp2 HG03041.hp1 others(2): Show |
3_prime_UTR_variant | MODIFIER | c.*1585delT | SHOX2 | ENSG00000168779.21 | transcript | ENST00000483851.7 | protein_coding | 5/5 | 1585 | chr3 | 158096441 | ||||||
| chr3:158096445 | A | C | 1 | a0001c0001t0024 | 1 | HG03139.hp1 | 3_prime_UTR_variant | MODIFIER | c.*1582T>G | SHOX2 | ENSG00000168779.21 | transcript | ENST00000483851.7 | protein_coding | 5/5 | 1582 | chr3 | 158096445 | ||||||
| chr3:158096452 | G | A | 1 | a0001c0001t0015 | 2 | HG01257.hp1 HG02273.hp2 |
3_prime_UTR_variant | MODIFIER | c.*1575C>T | SHOX2 | ENSG00000168779.21 | transcript | ENST00000483851.7 | protein_coding | 5/5 | 1575 | chr3 | 158096452 | ||||||
| chr3:158096823 | A | G | 33 | a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(30): Show |
353 | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(350): Show |
3_prime_UTR_variant | MODIFIER | c.*1204T>C | SHOX2 | ENSG00000168779.21 | transcript | ENST00000483851.7 | protein_coding | 5/5 | 1204 | chr3 | 158096823 | ||||||
| chr3:158096887 | CAAATATA others(3): Show |
C | 1 | a0001c0001t0025 | 1 | HG01978.hp1 | 3_prime_UTR_variant | MODIFIER | c.*1130_*1139delATAT others(6): Show |
SHOX2 | ENSG00000168779.21 | transcript | ENST00000483851.7 | protein_coding | 5/5 | 1130 | chr3 | 158096887 | ||||||
| chr3:158096889 | A | AAT | 8 | a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(5): Show |
23 | HG00639.hp1 HG00642.hp1 HG01070.hp1 others(20): Show |
3_prime_UTR_variant | MODIFIER | c.*1136_*1137dupAT | SHOX2 | ENSG00000168779.21 | transcript | ENST00000483851.7 | protein_coding | 5/5 | 1137 | chr3 | 158096889 | ||||||
| chr3:158096889 | A | AATAT | 7 | a0001c0001t0001 a0001c0001t0003 a0001c0001t0004 others(4): Show |
41 | HG00323.hp1 HG00423.hp1 HG00558.hp2 others(38): Show |
3_prime_UTR_variant | MODIFIER | c.*1134_*1137dupATAT | SHOX2 | ENSG00000168779.21 | transcript | ENST00000483851.7 | protein_coding | 5/5 | 1137 | chr3 | 158096889 | ||||||
| chr3:158096889 | A | AATATAT | 11 | a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(8): Show |
53 | HG00140.hp1 HG00140.hp2 HG00408.hp1 others(50): Show |
3_prime_UTR_variant | MODIFIER | c.*1132_*1137dupATAT others(2): Show |
SHOX2 | ENSG00000168779.21 | transcript | ENST00000483851.7 | protein_coding | 5/5 | 1137 | chr3 | 158096889 | ||||||
| chr3:158096889 | A | AATATATA others(1): Show |
9 | a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(6): Show |
29 | HG00544.hp1 HG00544.hp2 HG00642.hp2 others(26): Show |
3_prime_UTR_variant | MODIFIER | c.*1130_*1137dupATAT others(4): Show |
SHOX2 | ENSG00000168779.21 | transcript | ENST00000483851.7 | protein_coding | 5/5 | 1137 | chr3 | 158096889 | ||||||
| chr3:158096889 | A | AATATATA others(3): Show |
6 | a0001c0001t0001 a0001c0001t0003 a0001c0001t0004 others(3): Show |
18 | HG00099.hp1 HG01175.hp2 HG01256.hp2 others(15): Show |
3_prime_UTR_variant | MODIFIER | c.*1128_*1137dupATAT others(6): Show |
SHOX2 | ENSG00000168779.21 | transcript | ENST00000483851.7 | protein_coding | 5/5 | 1137 | chr3 | 158096889 | ||||||
| chr3:158096889 | A | AATATATA others(5): Show |
10 | a0001c0001t0001 a0001c0001t0003 a0001c0001t0004 others(7): Show |
17 | HG00621.hp2 HG01256.hp1 HG01261.hp2 others(14): Show |
3_prime_UTR_variant | MODIFIER | c.*1126_*1137dupATAT others(8): Show |
SHOX2 | ENSG00000168779.21 | transcript | ENST00000483851.7 | protein_coding | 5/5 | 1137 | chr3 | 158096889 | ||||||
| chr3:158096889 | A | AATATATA others(7): Show |
5 | a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(2): Show |
6 | HG02683.hp1 HG03453.hp2 NA18906.hp1 others(3): Show |
3_prime_UTR_variant | MODIFIER | c.*1124_*1137dupATAT others(10): Show |
SHOX2 | ENSG00000168779.21 | transcript | ENST00000483851.7 | protein_coding | 5/5 | 1137 | chr3 | 158096889 | ||||||
| chr3:158096889 | A | ATATATAT others(8): Show |
1 | a0001c0008t0022 | 1 | NA19078.hp1 | 3_prime_UTR_variant | MODIFIER | c.*1137_*1138insATAT others(11): Show |
SHOX2 | ENSG00000168779.21 | transcript | ENST00000483851.7 | protein_coding | 5/5 | 1137 | chr3 | 158096889 | ||||||
| chr3:158096889 | A | T | 1 | a0001c0001t0002 | 1 | HG02004.hp1 | 3_prime_UTR_variant | MODIFIER | c.*1138T>A | SHOX2 | ENSG00000168779.21 | transcript | ENST00000483851.7 | protein_coding | 5/5 | 1138 | chr3 | 158096889 | ||||||
| chr3:158096889 | AAT | A | 5 | a0001c0001t0002 a0001c0001t0003 a0001c0001t0005 others(2): Show |
12 | HG00558.hp1 HG00733.hp2 HG01081.hp2 others(9): Show |
3_prime_UTR_variant | MODIFIER | c.*1136_*1137delAT | SHOX2 | ENSG00000168779.21 | transcript | ENST00000483851.7 | protein_coding | 5/5 | 1136 | chr3 | 158096889 | ||||||
| chr3:158096889 | AATAT | A | 3 | a0001c0001t0003 a0001c0001t0006 a0001c0001t0023 |
4 | HG02145.hp1 HG02615.hp1 HG02895.hp1 others(1): Show |
3_prime_UTR_variant | MODIFIER | c.*1134_*1137delATAT | SHOX2 | ENSG00000168779.21 | transcript | ENST00000483851.7 | protein_coding | 5/5 | 1134 | chr3 | 158096889 | ||||||
| chr3:158096889 | AATATAT | A | 1 | a0001c0001t0003 | 5 | HG01255.hp1 HG02451.hp2 HG03041.hp1 others(2): Show |
3_prime_UTR_variant | MODIFIER | c.*1132_*1137delATAT others(2): Show |
SHOX2 | ENSG00000168779.21 | transcript | ENST00000483851.7 | protein_coding | 5/5 | 1132 | chr3 | 158096889 | ||||||
| chr3:158096889 | AATATATA others(1): Show |
A | 3 | a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 |
5 | HG00423.hp2 HG02486.hp1 HG03225.hp2 others(2): Show |
3_prime_UTR_variant | MODIFIER | c.*1130_*1137delATAT others(4): Show |
SHOX2 | ENSG00000168779.21 | transcript | ENST00000483851.7 | protein_coding | 5/5 | 1130 | chr3 | 158096889 | ||||||
| chr3:158096889 | AATATATA others(3): Show |
A | 3 | a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 |
6 | HG01243.hp1 HG02027.hp2 HG02280.hp2 others(3): Show |
3_prime_UTR_variant | MODIFIER | c.*1128_*1137delATAT others(6): Show |
SHOX2 | ENSG00000168779.21 | transcript | ENST00000483851.7 | protein_coding | 5/5 | 1128 | chr3 | 158096889 | ||||||
| chr3:158096889 | AATATATA others(5): Show |
A | 3 | a0001c0001t0001 a0001c0001t0002 a0001c0001t0015 |
7 | HG02080.hp2 HG02132.hp1 HG02273.hp2 others(4): Show |
3_prime_UTR_variant | MODIFIER | c.*1126_*1137delATAT others(8): Show |
SHOX2 | ENSG00000168779.21 | transcript | ENST00000483851.7 | protein_coding | 5/5 | 1126 | chr3 | 158096889 | ||||||
| chr3:158096889 | AATATATA others(7): Show |
A | 4 | a0001c0001t0001 a0001c0001t0002 a0001c0001t0015 others(1): Show |
13 | HG00621.hp1 HG01257.hp1 HG02129.hp1 others(10): Show |
3_prime_UTR_variant | MODIFIER | c.*1124_*1137delATAT others(10): Show |
SHOX2 | ENSG00000168779.21 | transcript | ENST00000483851.7 | protein_coding | 5/5 | 1124 | chr3 | 158096889 | ||||||
| chr3:158096889 | AATATATA others(15): Show |
A | 1 | a0001c0001t0003 | 1 | HG02818.hp2 | 3_prime_UTR_variant | MODIFIER | c.*1116_*1137delATAT others(18): Show |
SHOX2 | ENSG00000168779.21 | transcript | ENST00000483851.7 | protein_coding | 5/5 | 1116 | chr3 | 158096889 | ||||||
| chr3:158096889 | AATATATA others(19): Show |
A | 1 | a0001c0001t0002 | 4 | HG00733.hp1 HG03239.hp2 HG04184.hp2 others(1): Show |
3_prime_UTR_variant | MODIFIER | c.*1112_*1137delATAT others(22): Show |
SHOX2 | ENSG00000168779.21 | transcript | ENST00000483851.7 | protein_coding | 5/5 | 1112 | chr3 | 158096889 | ||||||
| chr3:158096907 | T | TATATATA others(43): Show |
1 | a0001c0001t0032 | 1 | HG02886.hp2 | 3_prime_UTR_variant | MODIFIER | c.*1119_*1120insCATA others(46): Show |
SHOX2 | ENSG00000168779.21 | transcript | ENST00000483851.7 | protein_coding | 5/5 | 1119 | chr3 | 158096907 | ||||||
| chr3:158096909 | T | TATATATA others(31): Show |
1 | a0001c0001t0013 | 2 | HG02280.hp1 HG03516.hp2 |
3_prime_UTR_variant | MODIFIER | c.*1117_*1118insCATA others(34): Show |
SHOX2 | ENSG00000168779.21 | transcript | ENST00000483851.7 | protein_coding | 5/5 | 1117 | chr3 | 158096909 | ||||||
| chr3:158096909 | T | TATATATA others(29): Show |
1 | a0001c0001t0016 | 1 | HG03486.hp2 | 3_prime_UTR_variant | MODIFIER | c.*1117_*1118insCATA others(32): Show |
SHOX2 | ENSG00000168779.21 | transcript | ENST00000483851.7 | protein_coding | 5/5 | 1117 | chr3 | 158096909 | ||||||
| chr3:158096909 | T | TATATATA others(25): Show |
1 | a0001c0001t0033 | 1 | HG02572.hp2 | 3_prime_UTR_variant | MODIFIER | c.*1117_*1118insCATA others(28): Show |
SHOX2 | ENSG00000168779.21 | transcript | ENST00000483851.7 | protein_coding | 5/5 | 1117 | chr3 | 158096909 | ||||||
| chr3:158096909 | T | TATATATA others(23): Show |
2 | a0001c0001t0017 a0001c0001t0018 |
2 | HG01069.hp2 HG03130.hp2 |
3_prime_UTR_variant | MODIFIER | c.*1117_*1118insCATA others(26): Show |
SHOX2 | ENSG00000168779.21 | transcript | ENST00000483851.7 | protein_coding | 5/5 | 1117 | chr3 | 158096909 | ||||||
| chr3:158096911 | T | TATATATA others(27): Show |
1 | a0001c0001t0019 | 1 | NA20129.hp2 | 3_prime_UTR_variant | MODIFIER | c.*1115_*1116insCATA others(30): Show |
SHOX2 | ENSG00000168779.21 | transcript | ENST00000483851.7 | protein_coding | 5/5 | 1115 | chr3 | 158096911 | ||||||
| chr3:158096911 | T | TATATATA others(71): Show |
1 | a0001c0001t0020 | 1 | HG03195.hp2 | 3_prime_UTR_variant | MODIFIER | c.*1115_*1116insCATA others(74): Show |
SHOX2 | ENSG00000168779.21 | transcript | ENST00000483851.7 | protein_coding | 5/5 | 1115 | chr3 | 158096911 | ||||||
| chr3:158096918 | A | ATATATAT others(17): Show |
1 | a0001c0001t0028 | 1 | HG02451.hp1 | 3_prime_UTR_variant | MODIFIER | c.*1108_*1109insCATA others(20): Show |
SHOX2 | ENSG00000168779.21 | transcript | ENST00000483851.7 | protein_coding | 5/5 | 1108 | chr3 | 158096918 | ||||||
| chr3:158096918 | A | ATATATAT others(13): Show |
1 | a0001c0001t0029 | 1 | HG02615.hp2 | 3_prime_UTR_variant | MODIFIER | c.*1108_*1109insCATA others(16): Show |
SHOX2 | ENSG00000168779.21 | transcript | ENST00000483851.7 | protein_coding | 5/5 | 1108 | chr3 | 158096918 | ||||||
| chr3:158096918 | ATATATAT others(7): Show |
A | 1 | a0001c0001t0027 | 1 | HG02486.hp2 | 3_prime_UTR_variant | MODIFIER | c.*1095_*1108delCATA others(10): Show |
SHOX2 | ENSG00000168779.21 | transcript | ENST00000483851.7 | protein_coding | 5/5 | 1095 | chr3 | 158096918 | ||||||
| chr3:158096922 | ATATATAT others(3): Show |
A | 1 | a0001c0001t0026 | 1 | HG01257.hp2 | 3_prime_UTR_variant | MODIFIER | c.*1095_*1104delCATA others(6): Show |
SHOX2 | ENSG00000168779.21 | transcript | ENST00000483851.7 | protein_coding | 5/5 | 1095 | chr3 | 158096922 | ||||||
| chr3:158096924 | A | ATATATAT others(25): Show |
1 | a0001c0001t0001 | 1 | NA19064.hp2 | 3_prime_UTR_variant | MODIFIER | c.*1102_*1103insGATA others(28): Show |
SHOX2 | ENSG00000168779.21 | transcript | ENST00000483851.7 | protein_coding | 5/5 | 1102 | chr3 | 158096924 | ||||||
| chr3:158096924 | A | ATATATAT others(11): Show |
1 | a0001c0001t0001 | 1 | NA18990.hp2 | 3_prime_UTR_variant | MODIFIER | c.*1102_*1103insGATA others(14): Show |
SHOX2 | ENSG00000168779.21 | transcript | ENST00000483851.7 | protein_coding | 5/5 | 1102 | chr3 | 158096924 | ||||||
| chr3:158096928 | A | ATATATAT others(3): Show |
1 | a0001c0001t0003 | 1 | HG02647.hp2 | 3_prime_UTR_variant | MODIFIER | c.*1098_*1099insCATA others(6): Show |
SHOX2 | ENSG00000168779.21 | transcript | ENST00000483851.7 | protein_coding | 5/5 | 1098 | chr3 | 158096928 | ||||||
| chr3:158096930 | A | ATATATAT others(9): Show |
1 | a0001c0001t0002 | 2 | NA18956.hp1 NA18966.hp1 |
3_prime_UTR_variant | MODIFIER | c.*1096_*1097insCATA others(12): Show |
SHOX2 | ENSG00000168779.21 | transcript | ENST00000483851.7 | protein_coding | 5/5 | 1096 | chr3 | 158096930 | ||||||
| chr3:158096930 | A | ATATATAT others(7): Show |
1 | a0001c0001t0002 | 1 | NA18948.hp2 | 3_prime_UTR_variant | MODIFIER | c.*1096_*1097insCATA others(10): Show |
SHOX2 | ENSG00000168779.21 | transcript | ENST00000483851.7 | protein_coding | 5/5 | 1096 | chr3 | 158096930 | ||||||
| chr3:158096930 | A | ATATATAT others(5): Show |
2 | a0001c0001t0002 a0001c0001t0003 |
10 | HG00408.hp2 HG00738.hp2 HG01433.hp1 others(7): Show |
3_prime_UTR_variant | MODIFIER | c.*1096_*1097insCATA others(8): Show |
SHOX2 | ENSG00000168779.21 | transcript | ENST00000483851.7 | protein_coding | 5/5 | 1096 | chr3 | 158096930 | ||||||
| chr3:158096930 | A | ATATATAT others(3): Show |
1 | a0001c0001t0002 | 5 | HG02258.hp2 HG03927.hp2 NA18983.hp1 others(2): Show |
3_prime_UTR_variant | MODIFIER | c.*1096_*1097insCATA others(6): Show |
SHOX2 | ENSG00000168779.21 | transcript | ENST00000483851.7 | protein_coding | 5/5 | 1096 | chr3 | 158096930 | ||||||
| chr3:158096930 | A | ATATATAT others(1): Show |
3 | a0001c0001t0002 a0001c0001t0003 a0001c0001t0012 |
28 | HG01081.hp1 HG01109.hp2 HG01346.hp2 others(25): Show |
3_prime_UTR_variant | MODIFIER | c.*1096_*1097insCATA others(4): Show |
SHOX2 | ENSG00000168779.21 | transcript | ENST00000483851.7 | protein_coding | 5/5 | 1096 | chr3 | 158096930 | ||||||
| chr3:158096930 | A | ATATATG | 2 | a0001c0001t0002 a0001c0001t0003 |
25 | HG00099.hp2 HG00609.hp1 HG01074.hp2 others(22): Show |
3_prime_UTR_variant | MODIFIER | c.*1096_*1097insCATA others(2): Show |
SHOX2 | ENSG00000168779.21 | transcript | ENST00000483851.7 | protein_coding | 5/5 | 1096 | chr3 | 158096930 | ||||||
| chr3:158096930 | A | ATATG | 3 | a0001c0001t0002 a0001c0001t0003 a0001c0009t0003 |
14 | HG01261.hp1 HG01978.hp2 HG01981.hp2 others(11): Show |
3_prime_UTR_variant | MODIFIER | c.*1096_*1097insCATA | SHOX2 | ENSG00000168779.21 | transcript | ENST00000483851.7 | protein_coding | 5/5 | 1096 | chr3 | 158096930 | ||||||
| chr3:158096930 | A | ATG | 1 | a0001c0001t0002 | 9 | HG02015.hp1 HG02074.hp1 HG02074.hp2 others(6): Show |
3_prime_UTR_variant | MODIFIER | c.*1095_*1096dupCA | SHOX2 | ENSG00000168779.21 | transcript | ENST00000483851.7 | protein_coding | 5/5 | 1096 | chr3 | 158096930 | ||||||
| chr3:158096930 | A | G | 2 | a0001c0001t0002 a0001c0001t0025 |
16 | HG00558.hp1 HG00621.hp1 HG00733.hp1 others(13): Show |
3_prime_UTR_variant | MODIFIER | c.*1097T>C | SHOX2 | ENSG00000168779.21 | transcript | ENST00000483851.7 | protein_coding | 5/5 | 1097 | chr3 | 158096930 | ||||||
| chr3:158096932 | G | A | 7 | a0001c0001t0001 a0001c0001t0003 a0001c0001t0004 others(4): Show |
51 | HG00099.hp1 HG00408.hp1 HG00423.hp1 others(48): Show |
3_prime_UTR_variant | MODIFIER | c.*1095C>T | SHOX2 | ENSG00000168779.21 | transcript | ENST00000483851.7 | protein_coding | 5/5 | 1095 | chr3 | 158096932 | ||||||
| chr3:158096933 | G | T | 1 | a0001c0001t0035 | 1 | NA19001.hp2 | 3_prime_UTR_variant | MODIFIER | c.*1094C>A | SHOX2 | ENSG00000168779.21 | transcript | ENST00000483851.7 | protein_coding | 5/5 | 1094 | chr3 | 158096933 | ||||||
| chr3:158096936 | A | G | 2 | a0001c0001t0028 a0001c0001t0029 |
2 | HG02451.hp1 HG02615.hp2 |
3_prime_UTR_variant | MODIFIER | c.*1091T>C | SHOX2 | ENSG00000168779.21 | transcript | ENST00000483851.7 | protein_coding | 5/5 | 1091 | chr3 | 158096936 | ||||||
| chr3:158096954 | A | ATATATAT others(29): Show |
1 | a0001c0001t0014 | 2 | HG02258.hp1 NA19240.hp2 |
3_prime_UTR_variant | MODIFIER | c.*1072_*1073insCATA others(32): Show |
SHOX2 | ENSG00000168779.21 | transcript | ENST00000483851.7 | protein_coding | 5/5 | 1072 | chr3 | 158096954 | ||||||
| chr3:158096954 | A | ATATATAT others(27): Show |
1 | a0001c0001t0034 | 1 | HG01891.hp1 | 3_prime_UTR_variant | MODIFIER | c.*1072_*1073insCATA others(30): Show |
SHOX2 | ENSG00000168779.21 | transcript | ENST00000483851.7 | protein_coding | 5/5 | 1072 | chr3 | 158096954 | ||||||
| chr3:158096954 | A | ATG | 3 | a0001c0001t0013 a0001c0001t0032 a0001c0001t0033 |
4 | HG02280.hp1 HG02572.hp2 HG02886.hp2 others(1): Show |
3_prime_UTR_variant | MODIFIER | c.*1071_*1072dupCA | SHOX2 | ENSG00000168779.21 | transcript | ENST00000483851.7 | protein_coding | 5/5 | 1072 | chr3 | 158096954 | ||||||
| chr3:158096954 | A | G | 28 | a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(25): Show |
346 | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(343): Show |
3_prime_UTR_variant | MODIFIER | c.*1073T>C | SHOX2 | ENSG00000168779.21 | transcript | ENST00000483851.7 | protein_coding | 5/5 | 1073 | chr3 | 158096954 | ||||||
| chr3:158097062 | T | C | 1 | a0001c0001t0012 | 2 | NA18943.hp2 NA18975.hp2 |
3_prime_UTR_variant | MODIFIER | c.*965A>G | SHOX2 | ENSG00000168779.21 | transcript | ENST00000483851.7 | protein_coding | 5/5 | 965 | chr3 | 158097062 | ||||||
| chr3:158097094 | T | A | 1 | a0001c0008t0022 | 1 | NA19078.hp1 | 3_prime_UTR_variant | MODIFIER | c.*933A>T | SHOX2 | ENSG00000168779.21 | transcript | ENST00000483851.7 | protein_coding | 5/5 | 933 | chr3 | 158097094 | ||||||
| chr3:158097171 | A | G | 1 | a0001c0007t0031 | 1 | NA18965.hp2 | 3_prime_UTR_variant | MODIFIER | c.*856T>C | SHOX2 | ENSG00000168779.21 | transcript | ENST00000483851.7 | protein_coding | 5/5 | 856 | chr3 | 158097171 | ||||||
| chr3:158097299 | G | A | 40 | a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(37): Show |
363 | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(360): Show |
3_prime_UTR_variant | MODIFIER | c.*728C>T | SHOX2 | ENSG00000168779.21 | transcript | ENST00000483851.7 | protein_coding | 5/5 | 728 | chr3 | 158097299 | ||||||
| chr3:158097339 | TGTGAACT others(13): Show |
T | 1 | a0001c0001t0030 | 1 | NA18979.hp2 | 3_prime_UTR_variant | MODIFIER | c.*668_*687delTGCGCA others(14): Show |
SHOX2 | ENSG00000168779.21 | transcript | ENST00000483851.7 | protein_coding | 5/5 | 668 | chr3 | 158097339 | ||||||
| chr3:158097356 | C | T | 1 | a0001c0001t0002 | 1 | HG03831.hp1 | 3_prime_UTR_variant | MODIFIER | c.*671G>A | SHOX2 | ENSG00000168779.21 | transcript | ENST00000483851.7 | protein_coding | 5/5 | 671 | chr3 | 158097356 | ||||||
| chr3:158097360 | C | T | 5 | a0001c0001t0016 a0001c0001t0017 a0001c0001t0018 others(2): Show |
5 | HG01069.hp2 HG03130.hp2 HG03195.hp2 others(2): Show |
3_prime_UTR_variant | MODIFIER | c.*667G>A | SHOX2 | ENSG00000168779.21 | transcript | ENST00000483851.7 | protein_coding | 5/5 | 667 | chr3 | 158097360 | ||||||
| chr3:158097428 | A | T | 11 | a0001c0001t0002 a0001c0001t0003 a0001c0001t0011 others(8): Show |
179 | HG00099.hp1 HG00099.hp2 HG00408.hp2 others(176): Show |
3_prime_UTR_variant | MODIFIER | c.*599T>A | SHOX2 | ENSG00000168779.21 | transcript | ENST00000483851.7 | protein_coding | 5/5 | 599 | chr3 | 158097428 | ||||||
| chr3:158097525 | A | C | 1 | a0001c0001t0023 | 1 | HG02145.hp1 | 3_prime_UTR_variant | MODIFIER | c.*502T>G | SHOX2 | ENSG00000168779.21 | transcript | ENST00000483851.7 | protein_coding | 5/5 | 502 | chr3 | 158097525 | ||||||
| chr3:158097591 | C | T | 33 | a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(30): Show |
353 | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(350): Show |
3_prime_UTR_variant | MODIFIER | c.*436G>A | SHOX2 | ENSG00000168779.21 | transcript | ENST00000483851.7 | protein_coding | 5/5 | 436 | chr3 | 158097591 | ||||||
| chr3:158097611 | C | T | 2 | a0001c0001t0028 a0001c0001t0029 |
2 | HG02451.hp1 HG02615.hp2 |
3_prime_UTR_variant | MODIFIER | c.*416G>A | SHOX2 | ENSG00000168779.21 | transcript | ENST00000483851.7 | protein_coding | 5/5 | 416 | chr3 | 158097611 | ||||||
| chr3:158097672 | A | G | 11 | a0001c0001t0002 a0001c0001t0003 a0001c0001t0011 others(8): Show |
179 | HG00099.hp1 HG00099.hp2 HG00408.hp2 others(176): Show |
3_prime_UTR_variant | MODIFIER | c.*355T>C | SHOX2 | ENSG00000168779.21 | transcript | ENST00000483851.7 | protein_coding | 5/5 | 355 | chr3 | 158097672 | ||||||
| chr3:158097680 | G | A | 1 | a0004c0004t0037 | 1 | HG04115.hp2 | 3_prime_UTR_variant | MODIFIER | c.*347C>T | SHOX2 | ENSG00000168779.21 | transcript | ENST00000483851.7 | protein_coding | 5/5 | 347 | chr3 | 158097680 | ||||||
| chr3:158097691 | C | T | 33 | a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(30): Show |
353 | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(350): Show |
3_prime_UTR_variant | MODIFIER | c.*336G>A | SHOX2 | ENSG00000168779.21 | transcript | ENST00000483851.7 | protein_coding | 5/5 | 336 | chr3 | 158097691 | ||||||
| chr3:158097717 | G | A | 1 | a0001c0002t0038 | 1 | HG02698.hp1 | 3_prime_UTR_variant | MODIFIER | c.*310C>T | SHOX2 | ENSG00000168779.21 | transcript | ENST00000483851.7 | protein_coding | 5/5 | 310 | chr3 | 158097717 | ||||||
| chr3:158097867 | T | C | 5 | a0001c0001t0016 a0001c0001t0017 a0001c0001t0018 others(2): Show |
5 | HG01069.hp2 HG03130.hp2 HG03195.hp2 others(2): Show |
3_prime_UTR_variant | MODIFIER | c.*160A>G | SHOX2 | ENSG00000168779.21 | transcript | ENST00000483851.7 | protein_coding | 5/5 | 160 | chr3 | 158097867 | ||||||
| chr3:158097883 | C | G | 1 | a0001c0008t0022 | 1 | NA19078.hp1 | 3_prime_UTR_variant | MODIFIER | c.*144G>C | SHOX2 | ENSG00000168779.21 | transcript | ENST00000483851.7 | protein_coding | 5/5 | 144 | chr3 | 158097883 | ||||||
| chr3:158097890 | G | A | 2 | a0001c0001t0007 a0005c0005t0007 |
5 | NA18747.hp2 NA18948.hp1 NA18950.hp2 others(2): Show |
3_prime_UTR_variant | MODIFIER | c.*137C>T | SHOX2 | ENSG00000168779.21 | transcript | ENST00000483851.7 | protein_coding | 5/5 | 137 | chr3 | 158097890 | ||||||
| chr3:158106120 | T | C | 1 | a0001c0001t0008 | 5 | HG00735.hp2 HG01081.hp2 HG01099.hp1 others(2): Show |
5_prime_UTR_premature_start_codon_gain_variant | LOW | c.-96A>G | SHOX2 | ENSG00000168779.21 | transcript | ENST00000483851.7 | protein_coding | 1/5 | chr3 | 158106120 | |||||||
| chr3:158106285 | G | GGGA | 1 | a0001c0001t0010 | 4 | HG02145.hp2 HG02257.hp1 HG02717.hp2 others(1): Show |
5_prime_UTR_variant | MODIFIER | c.-264_-262dupTCC | SHOX2 | ENSG00000168779.21 | transcript | ENST00000483851.7 | protein_coding | 1/5 | 262 | chr3 | 158106285 | ||||||
| chr3:158106320 | T | C | 35 | a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(32): Show |
358 | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(355): Show |
5_prime_UTR_variant | MODIFIER | c.-296A>G | SHOX2 | ENSG00000168779.21 | transcript | ENST00000483851.7 | protein_coding | 1/5 | 296 | chr3 | 158106320 |
| view | chr:pos | ref | alt | # # of ghapid:genebody level |
ghapids | # # of haplotypeids |
haplotypeids | annotation | impact | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | genebody_biotype | rank | cdna cdna pos length |
cds cds pos length |
aa aa pos length |
distance | status | chr | pos |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| chr3:158098547 | C | T | 3 | a0001c0002t0009g0020 a0001c0002t0009g0081 a0001c0002t0038g0082 |
5 | HG02698.hp1 HG02735.hp2 NA18945.hp2 others(2): Show |
intron_variant | MODIFIER | c.703-263G>A | SHOX2 | ENSG00000168779.21 | transcript | ENST00000483851.7 | protein_coding | 4/4 | chr3 | 158098547 | |||||||
| chr3:158098647 | T | A | 73 | a0001c0001t0001g0002 a0001c0001t0001g0003 a0001c0001t0001g0007 others(70): Show |
353 | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(350): Show |
intron_variant | MODIFIER | c.703-363A>T | SHOX2 | ENSG00000168779.21 | transcript | ENST00000483851.7 | protein_coding | 4/4 | chr3 | 158098647 | |||||||
| chr3:158099039 | C | T | 1 | a0001c0001t0036g0077 | 1 | NA21309.hp1 | intron_variant | MODIFIER | c.703-755G>A | SHOX2 | ENSG00000168779.21 | transcript | ENST00000483851.7 | protein_coding | 4/4 | chr3 | 158099039 | |||||||
| chr3:158099128 | G | C | 76 | a0001c0001t0001g0002 a0001c0001t0001g0003 a0001c0001t0001g0007 others(73): Show |
358 | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(355): Show |
intron_variant | MODIFIER | c.702+732C>G | SHOX2 | ENSG00000168779.21 | transcript | ENST00000483851.7 | protein_coding | 4/4 | chr3 | 158099128 | |||||||
| chr3:158099141 | G | C | 1 | a0001c0001t0004g0031 | 2 | HG02896.hp2 HG02897.hp2 |
intron_variant | MODIFIER | c.702+719C>G | SHOX2 | ENSG00000168779.21 | transcript | ENST00000483851.7 | protein_coding | 4/4 | chr3 | 158099141 | |||||||
| chr3:158099267 | T | C | 2 | a0001c0001t0004g0061 a0001c0001t0004g0067 |
2 | HG00423.hp1 NA18991.hp2 |
intron_variant | MODIFIER | c.702+593A>G | SHOX2 | ENSG00000168779.21 | transcript | ENST00000483851.7 | protein_coding | 4/4 | chr3 | 158099267 | |||||||
| chr3:158099275 | G | A | 1 | a0001c0001t0036g0077 | 1 | NA21309.hp1 | intron_variant | MODIFIER | c.702+585C>T | SHOX2 | ENSG00000168779.21 | transcript | ENST00000483851.7 | protein_coding | 4/4 | chr3 | 158099275 | |||||||
| chr3:158099342 | T | G | 1 | a0001c0001t0003g0075 | 1 | HG03225.hp1 | intron_variant | MODIFIER | c.702+518A>C | SHOX2 | ENSG00000168779.21 | transcript | ENST00000483851.7 | protein_coding | 4/4 | chr3 | 158099342 | |||||||
| chr3:158099384 | T | A | 2 | a0001c0001t0006g0009 a0001c0001t0006g0076 |
8 | HG01884.hp2 HG02647.hp1 HG02886.hp1 others(5): Show |
intron_variant | MODIFIER | c.702+476A>T | SHOX2 | ENSG00000168779.21 | transcript | ENST00000483851.7 | protein_coding | 4/4 | chr3 | 158099384 | |||||||
| chr3:158099467 | G | A | 1 | a0001c0001t0001g0025 | 2 | NA19079.hp2 NA19083.hp2 |
intron_variant | MODIFIER | c.702+393C>T | SHOX2 | ENSG00000168779.21 | transcript | ENST00000483851.7 | protein_coding | 4/4 | chr3 | 158099467 | |||||||
| chr3:158099495 | G | C | 3 | a0001c0002t0009g0020 a0001c0002t0009g0081 a0001c0002t0038g0082 |
5 | HG02698.hp1 HG02735.hp2 NA18945.hp2 others(2): Show |
intron_variant | MODIFIER | c.702+365C>G | SHOX2 | ENSG00000168779.21 | transcript | ENST00000483851.7 | protein_coding | 4/4 | chr3 | 158099495 | |||||||
| chr3:158099550 | A | G | 2 | a0001c0001t0006g0009 a0001c0001t0006g0076 |
8 | HG01884.hp2 HG02647.hp1 HG02886.hp1 others(5): Show |
intron_variant | MODIFIER | c.702+310T>C | SHOX2 | ENSG00000168779.21 | transcript | ENST00000483851.7 | protein_coding | 4/4 | chr3 | 158099550 | |||||||
| chr3:158099644 | C | A | 73 | a0001c0001t0001g0002 a0001c0001t0001g0003 a0001c0001t0001g0007 others(70): Show |
353 | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(350): Show |
intron_variant | MODIFIER | c.702+216G>T | SHOX2 | ENSG00000168779.21 | transcript | ENST00000483851.7 | protein_coding | 4/4 | chr3 | 158099644 | |||||||
| chr3:158099646 | G | C | 73 | a0001c0001t0001g0002 a0001c0001t0001g0003 a0001c0001t0001g0007 others(70): Show |
353 | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(350): Show |
intron_variant | MODIFIER | c.702+214C>G | SHOX2 | ENSG00000168779.21 | transcript | ENST00000483851.7 | protein_coding | 4/4 | chr3 | 158099646 | |||||||
| chr3:158099649 | A | G | 82 | a0001c0001t0001g0002 a0001c0001t0001g0003 a0001c0001t0001g0007 others(79): Show |
371 | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(368): Show |
intron_variant | MODIFIER | c.702+211T>C | SHOX2 | ENSG00000168779.21 | transcript | ENST00000483851.7 | protein_coding | 4/4 | chr3 | 158099649 | |||||||
| chr3:158099728 | A | G | 73 | a0001c0001t0001g0002 a0001c0001t0001g0003 a0001c0001t0001g0007 others(70): Show |
353 | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(350): Show |
intron_variant | MODIFIER | c.702+132T>C | SHOX2 | ENSG00000168779.21 | transcript | ENST00000483851.7 | protein_coding | 4/4 | chr3 | 158099728 | |||||||
| chr3:158099959 | T | C | 5 | a0001c0001t0016g0037 a0001c0001t0017g0038 a0001c0001t0018g0039 others(2): Show |
5 | HG01069.hp2 HG03130.hp2 HG03195.hp2 others(2): Show |
intron_variant | MODIFIER | c.614-11A>G | SHOX2 | ENSG00000168779.21 | transcript | ENST00000483851.7 | protein_coding | 3/4 | chr3 | 158099959 | |||||||
| chr3:158100329 | A | G | 1 | a0001c0001t0001g0027 | 2 | HG02165.hp2 NA18612.hp1 |
intron_variant | MODIFIER | c.556-18T>C | SHOX2 | ENSG00000168779.21 | transcript | ENST00000483851.7 | protein_coding | 2/4 | chr3 | 158100329 | |||||||
| chr3:158100334 | A | G | 1 | a0001c0001t0003g0013 | 4 | HG01891.hp2 HG02055.hp2 HG02647.hp2 others(1): Show |
intron_variant | MODIFIER | c.556-23T>C | SHOX2 | ENSG00000168779.21 | transcript | ENST00000483851.7 | protein_coding | 2/4 | chr3 | 158100334 | |||||||
| chr3:158100410 | C | T | 3 | a0001c0002t0009g0020 a0001c0002t0009g0081 a0001c0002t0038g0082 |
5 | HG02698.hp1 HG02735.hp2 NA18945.hp2 others(2): Show |
intron_variant | MODIFIER | c.556-99G>A | SHOX2 | ENSG00000168779.21 | transcript | ENST00000483851.7 | protein_coding | 2/4 | chr3 | 158100410 | |||||||
| chr3:158100559 | T | G | 73 | a0001c0001t0001g0002 a0001c0001t0001g0003 a0001c0001t0001g0007 others(70): Show |
353 | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(350): Show |
intron_variant | MODIFIER | c.556-248A>C | SHOX2 | ENSG00000168779.21 | transcript | ENST00000483851.7 | protein_coding | 2/4 | chr3 | 158100559 | |||||||
| chr3:158100711 | A | C | 1 | a0001c0001t0002g0032 | 2 | HG02602.hp2 HG04228.hp2 |
intron_variant | MODIFIER | c.556-400T>G | SHOX2 | ENSG00000168779.21 | transcript | ENST00000483851.7 | protein_coding | 2/4 | chr3 | 158100711 | |||||||
| chr3:158100787 | C | T | 1 | a0001c0001t0001g0048 | 1 | NA19077.hp1 | intron_variant | MODIFIER | c.556-476G>A | SHOX2 | ENSG00000168779.21 | transcript | ENST00000483851.7 | protein_coding | 2/4 | chr3 | 158100787 | |||||||
| chr3:158101044 | G | T | 2 | a0001c0001t0001g0010 a0001c0001t0001g0017 |
10 | HG00140.hp1 HG00639.hp2 HG01070.hp2 others(7): Show |
intron_variant | MODIFIER | c.556-733C>A | SHOX2 | ENSG00000168779.21 | transcript | ENST00000483851.7 | protein_coding | 2/4 | chr3 | 158101044 | |||||||
| chr3:158101240 | C | T | 1 | a0001c0001t0003g0062 | 1 | HG02486.hp1 | intron_variant | MODIFIER | c.556-929G>A | SHOX2 | ENSG00000168779.21 | transcript | ENST00000483851.7 | protein_coding | 2/4 | chr3 | 158101240 | |||||||
| chr3:158101256 | TTTGAAAG others(36): Show |
T | 1 | a0001c0001t0003g0070 | 1 | HG02896.hp1 | intron_variant | MODIFIER | c.556-988_556-946del others(43): Show |
SHOX2 | ENSG00000168779.21 | transcript | ENST00000483851.7 | protein_coding | 2/4 | chr3 | 158101256 | |||||||
| chr3:158101297 | T | G | 1 | a0001c0001t0001g0002 | 1 | HG01255.hp2 | intron_variant | MODIFIER | c.556-986A>C | SHOX2 | ENSG00000168779.21 | transcript | ENST00000483851.7 | protein_coding | 2/4 | chr3 | 158101297 | |||||||
| chr3:158101372 | G | A | 5 | a0001c0001t0003g0004 a0001c0001t0003g0070 a0001c0001t0011g0034 others(2): Show |
30 | HG00099.hp1 HG00639.hp1 HG00642.hp1 others(27): Show |
intron_variant | MODIFIER | c.556-1061C>T | SHOX2 | ENSG00000168779.21 | transcript | ENST00000483851.7 | protein_coding | 2/4 | chr3 | 158101372 | |||||||
| chr3:158101589 | GT | G | 81 | a0001c0001t0001g0002 a0001c0001t0001g0003 a0001c0001t0001g0007 others(78): Show |
363 | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(360): Show |
intron_variant | MODIFIER | c.555+1088delA | SHOX2 | ENSG00000168779.21 | transcript | ENST00000483851.7 | protein_coding | 2/4 | chr3 | 158101589 | |||||||
| chr3:158101591 | T | A | 73 | a0001c0001t0001g0002 a0001c0001t0001g0003 a0001c0001t0001g0007 others(70): Show |
353 | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(350): Show |
intron_variant | MODIFIER | c.555+1087A>T | SHOX2 | ENSG00000168779.21 | transcript | ENST00000483851.7 | protein_coding | 2/4 | chr3 | 158101591 | |||||||
| chr3:158101609 | T | C | 73 | a0001c0001t0001g0002 a0001c0001t0001g0003 a0001c0001t0001g0007 others(70): Show |
353 | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(350): Show |
intron_variant | MODIFIER | c.555+1069A>G | SHOX2 | ENSG00000168779.21 | transcript | ENST00000483851.7 | protein_coding | 2/4 | chr3 | 158101609 | |||||||
| chr3:158101795 | C | T | 76 | a0001c0001t0001g0002 a0001c0001t0001g0003 a0001c0001t0001g0007 others(73): Show |
358 | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(355): Show |
intron_variant | MODIFIER | c.555+883G>A | SHOX2 | ENSG00000168779.21 | transcript | ENST00000483851.7 | protein_coding | 2/4 | chr3 | 158101795 | |||||||
| chr3:158101888 | T | G | 1 | a0001c0001t0003g0075 | 1 | HG03225.hp1 | intron_variant | MODIFIER | c.555+790A>C | SHOX2 | ENSG00000168779.21 | transcript | ENST00000483851.7 | protein_coding | 2/4 | chr3 | 158101888 | |||||||
| chr3:158102074 | G | A | 1 | a0001c0001t0008g0083 | 1 | HG00735.hp2 | intron_variant | MODIFIER | c.555+604C>T | SHOX2 | ENSG00000168779.21 | transcript | ENST00000483851.7 | protein_coding | 2/4 | chr3 | 158102074 | |||||||
| chr3:158102214 | A | G | 2 | a0001c0001t0006g0009 a0001c0001t0006g0076 |
8 | HG01884.hp2 HG02647.hp1 HG02886.hp1 others(5): Show |
intron_variant | MODIFIER | c.555+464T>C | SHOX2 | ENSG00000168779.21 | transcript | ENST00000483851.7 | protein_coding | 2/4 | chr3 | 158102214 | |||||||
| chr3:158102382 | C | A | 1 | a0001c0001t0001g0078 | 1 | HG02572.hp1 | intron_variant | MODIFIER | c.555+296G>T | SHOX2 | ENSG00000168779.21 | transcript | ENST00000483851.7 | protein_coding | 2/4 | chr3 | 158102382 | |||||||
| chr3:158102402 | G | T | 1 | a0001c0001t0003g0075 | 1 | HG03225.hp1 | intron_variant | MODIFIER | c.555+276C>A | SHOX2 | ENSG00000168779.21 | transcript | ENST00000483851.7 | protein_coding | 2/4 | chr3 | 158102402 | |||||||
| chr3:158102481 | G | GA | 26 | a0001c0001t0001g0017 a0001c0001t0001g0018 a0001c0001t0001g0049 others(23): Show |
153 | HG00099.hp2 HG00140.hp1 HG00408.hp2 others(150): Show |
intron_variant | MODIFIER | c.555+196dupT | SHOX2 | ENSG00000168779.21 | transcript | ENST00000483851.7 | protein_coding | 2/4 | chr3 | 158102481 | |||||||
| chr3:158102481 | G | GAA | 9 | a0001c0001t0002g0069 a0001c0001t0002g0074 a0001c0001t0003g0004 others(6): Show |
39 | HG00099.hp1 HG00639.hp1 HG00642.hp1 others(36): Show |
intron_variant | MODIFIER | c.555+195_555+196dup others(2): Show |
SHOX2 | ENSG00000168779.21 | transcript | ENST00000483851.7 | protein_coding | 2/4 | chr3 | 158102481 | |||||||
| chr3:158102626 | A | G | 3 | a0001c0002t0009g0020 a0001c0002t0009g0081 a0001c0002t0038g0082 |
5 | HG02698.hp1 HG02735.hp2 NA18945.hp2 others(2): Show |
intron_variant | MODIFIER | c.555+52T>C | SHOX2 | ENSG00000168779.21 | transcript | ENST00000483851.7 | protein_coding | 2/4 | chr3 | 158102626 | |||||||
| chr3:158102634 | C | T | 72 | a0001c0001t0001g0002 a0001c0001t0001g0003 a0001c0001t0001g0007 others(69): Show |
351 | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(348): Show |
intron_variant | MODIFIER | c.555+44G>A | SHOX2 | ENSG00000168779.21 | transcript | ENST00000483851.7 | protein_coding | 2/4 | chr3 | 158102634 | |||||||
| chr3:158102648 | T | G | 1 | a0001c0001t0003g0023 | 2 | HG02809.hp2 HG03579.hp2 |
intron_variant | MODIFIER | c.555+30A>C | SHOX2 | ENSG00000168779.21 | transcript | ENST00000483851.7 | protein_coding | 2/4 | chr3 | 158102648 | |||||||
| chr3:158103215 | G | C | 81 | a0001c0001t0001g0002 a0001c0001t0001g0003 a0001c0001t0001g0007 others(78): Show |
363 | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(360): Show |
intron_variant | MODIFIER | c.347-329C>G | SHOX2 | ENSG00000168779.21 | transcript | ENST00000483851.7 | protein_coding | 1/4 | chr3 | 158103215 | |||||||
| chr3:158103230 | CGCACTCA others(11): Show |
C | 1 | a0001c0001t0004g0026 | 2 | HG00609.hp2 NA19077.hp2 |
intron_variant | MODIFIER | c.347-362_347-345del others(18): Show |
SHOX2 | ENSG00000168779.21 | transcript | ENST00000483851.7 | protein_coding | 1/4 | chr3 | 158103230 | |||||||
| chr3:158103398 | C | G | 8 | a0001c0001t0001g0003 a0001c0001t0001g0025 a0001c0001t0007g0016 others(5): Show |
35 | HG00323.hp1 HG00544.hp1 HG00642.hp2 others(32): Show |
intron_variant | MODIFIER | c.347-512G>C | SHOX2 | ENSG00000168779.21 | transcript | ENST00000483851.7 | protein_coding | 1/4 | chr3 | 158103398 | |||||||
| chr3:158103630 | T | C | 81 | a0001c0001t0001g0002 a0001c0001t0001g0003 a0001c0001t0001g0007 others(78): Show |
363 | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(360): Show |
intron_variant | MODIFIER | c.347-744A>G | SHOX2 | ENSG00000168779.21 | transcript | ENST00000483851.7 | protein_coding | 1/4 | chr3 | 158103630 | |||||||
| chr3:158103758 | C | T | 1 | a0001c0001t0003g0052 | 1 | HG01109.hp2 | intron_variant | MODIFIER | c.347-872G>A | SHOX2 | ENSG00000168779.21 | transcript | ENST00000483851.7 | protein_coding | 1/4 | chr3 | 158103758 | |||||||
| chr3:158104204 | C | G | 1 | a0001c0001t0001g0051 | 1 | NA19006.hp1 | intron_variant | MODIFIER | c.347-1318G>C | SHOX2 | ENSG00000168779.21 | transcript | ENST00000483851.7 | protein_coding | 1/4 | chr3 | 158104204 | |||||||
| chr3:158104222 | A | G | 1 | a0001c0001t0004g0050 | 1 | NA19055.hp2 | intron_variant | MODIFIER | c.347-1336T>C | SHOX2 | ENSG00000168779.21 | transcript | ENST00000483851.7 | protein_coding | 1/4 | chr3 | 158104222 | |||||||
| chr3:158104284 | G | C | 2 | a0001c0001t0002g0073 a0001c0001t0002g0074 |
2 | NA19006.hp2 NA19010.hp1 |
intron_variant | MODIFIER | c.346+1395C>G | SHOX2 | ENSG00000168779.21 | transcript | ENST00000483851.7 | protein_coding | 1/4 | chr3 | 158104284 | |||||||
| chr3:158104415 | A | T | 1 | a0001c0001t0004g0050 | 1 | NA19055.hp2 | intron_variant | MODIFIER | c.346+1264T>A | SHOX2 | ENSG00000168779.21 | transcript | ENST00000483851.7 | protein_coding | 1/4 | chr3 | 158104415 | |||||||
| chr3:158104511 | T | C | 2 | a0001c0001t0003g0013 a0001c0001t0003g0075 |
5 | HG01891.hp2 HG02055.hp2 HG02647.hp2 others(2): Show |
intron_variant | MODIFIER | c.346+1168A>G | SHOX2 | ENSG00000168779.21 | transcript | ENST00000483851.7 | protein_coding | 1/4 | chr3 | 158104511 | |||||||
| chr3:158104605 | C | T | 1 | a0001c0001t0003g0024 | 2 | HG02056.hp2 HG02080.hp1 |
intron_variant | MODIFIER | c.346+1074G>A | SHOX2 | ENSG00000168779.21 | transcript | ENST00000483851.7 | protein_coding | 1/4 | chr3 | 158104605 | |||||||
| chr3:158104666 | T | A | 1 | a0001c0001t0003g0075 | 1 | HG03225.hp1 | intron_variant | MODIFIER | c.346+1013A>T | SHOX2 | ENSG00000168779.21 | transcript | ENST00000483851.7 | protein_coding | 1/4 | chr3 | 158104666 | |||||||
| chr3:158104844 | G | A | 1 | a0001c0001t0006g0076 | 1 | HG01884.hp2 | intron_variant | MODIFIER | c.346+835C>T | SHOX2 | ENSG00000168779.21 | transcript | ENST00000483851.7 | protein_coding | 1/4 | chr3 | 158104844 | |||||||
| chr3:158104880 | T | C | 72 | a0001c0001t0001g0002 a0001c0001t0001g0003 a0001c0001t0001g0007 others(69): Show |
351 | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(348): Show |
intron_variant | MODIFIER | c.346+799A>G | SHOX2 | ENSG00000168779.21 | transcript | ENST00000483851.7 | protein_coding | 1/4 | chr3 | 158104880 | |||||||
| chr3:158104986 | A | C | 1 | a0001c0001t0005g0021 | 2 | HG01069.hp1 HG01071.hp2 |
intron_variant | MODIFIER | c.346+693T>G | SHOX2 | ENSG00000168779.21 | transcript | ENST00000483851.7 | protein_coding | 1/4 | chr3 | 158104986 | |||||||
| chr3:158105029 | GCCGCCCC others(6): Show |
G | 3 | a0001c0001t0001g0015 a0001c0001t0001g0048 a0001c0001t0001g0049 |
5 | HG00544.hp2 NA18943.hp1 NA18961.hp1 others(2): Show |
intron_variant | MODIFIER | c.346+637_346+649del others(13): Show |
SHOX2 | ENSG00000168779.21 | transcript | ENST00000483851.7 | protein_coding | 1/4 | chr3 | 158105029 | |||||||
| chr3:158105032 | G | C | 1 | a0001c0007t0031g0045 | 1 | NA18965.hp2 | intron_variant | MODIFIER | c.346+647C>G | SHOX2 | ENSG00000168779.21 | transcript | ENST00000483851.7 | protein_coding | 1/4 | chr3 | 158105032 | |||||||
| chr3:158105032 | G | GC | 24 | a0001c0001t0001g0002 a0001c0001t0001g0003 a0001c0001t0001g0007 others(21): Show |
44 | HG01069.hp1 HG01069.hp2 HG01071.hp1 others(41): Show |
intron_variant | MODIFIER | c.346+646dupG | SHOX2 | ENSG00000168779.21 | transcript | ENST00000483851.7 | protein_coding | 1/4 | chr3 | 158105032 | |||||||
| chr3:158105032 | GC | G | 35 | a0001c0001t0001g0002 a0001c0001t0001g0003 a0001c0001t0001g0007 others(32): Show |
145 | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(142): Show |
intron_variant | MODIFIER | c.346+646delG | SHOX2 | ENSG00000168779.21 | transcript | ENST00000483851.7 | protein_coding | 1/4 | chr3 | 158105032 | |||||||
| chr3:158105255 | C | G | 1 | a0001c0001t0030g0046 | 1 | NA18979.hp2 | intron_variant | MODIFIER | c.346+424G>C | SHOX2 | ENSG00000168779.21 | transcript | ENST00000483851.7 | protein_coding | 1/4 | chr3 | 158105255 | |||||||
| chr3:158105259 | T | A | 1 | a0001c0001t0030g0046 | 1 | NA18979.hp2 | intron_variant | MODIFIER | c.346+420A>T | SHOX2 | ENSG00000168779.21 | transcript | ENST00000483851.7 | protein_coding | 1/4 | chr3 | 158105259 | |||||||
| chr3:158105260 | C | G | 1 | a0001c0001t0030g0046 | 1 | NA18979.hp2 | intron_variant | MODIFIER | c.346+419G>C | SHOX2 | ENSG00000168779.21 | transcript | ENST00000483851.7 | protein_coding | 1/4 | chr3 | 158105260 | |||||||
| chr3:158105264 | C | G | 1 | a0001c0001t0030g0046 | 1 | NA18979.hp2 | intron_variant | MODIFIER | c.346+415G>C | SHOX2 | ENSG00000168779.21 | transcript | ENST00000483851.7 | protein_coding | 1/4 | chr3 | 158105264 | |||||||
| chr3:158105266 | C | T | 1 | a0001c0001t0030g0046 | 1 | NA18979.hp2 | intron_variant | MODIFIER | c.346+413G>A | SHOX2 | ENSG00000168779.21 | transcript | ENST00000483851.7 | protein_coding | 1/4 | chr3 | 158105266 | |||||||
| chr3:158105297 | T | G | 1 | a0001c0001t0030g0046 | 1 | NA18979.hp2 | intron_variant | MODIFIER | c.346+382A>C | SHOX2 | ENSG00000168779.21 | transcript | ENST00000483851.7 | protein_coding | 1/4 | chr3 | 158105297 | |||||||
| chr3:158105298 | C | T | 1 | a0001c0001t0030g0046 | 1 | NA18979.hp2 | intron_variant | MODIFIER | c.346+381G>A | SHOX2 | ENSG00000168779.21 | transcript | ENST00000483851.7 | protein_coding | 1/4 | chr3 | 158105298 | |||||||
| chr3:158105300 | C | T | 1 | a0001c0002t0009g0020 | 3 | NA18945.hp2 NA19080.hp1 NA19086.hp2 |
intron_variant | MODIFIER | c.346+379G>A | SHOX2 | ENSG00000168779.21 | transcript | ENST00000483851.7 | protein_coding | 1/4 | chr3 | 158105300 | |||||||
| chr3:158105303 | C | A | 1 | a0001c0001t0030g0046 | 1 | NA18979.hp2 | intron_variant | MODIFIER | c.346+376G>T | SHOX2 | ENSG00000168779.21 | transcript | ENST00000483851.7 | protein_coding | 1/4 | chr3 | 158105303 | |||||||
| chr3:158105311 | T | C | 81 | a0001c0001t0001g0002 a0001c0001t0001g0003 a0001c0001t0001g0007 others(78): Show |
363 | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(360): Show |
intron_variant | MODIFIER | c.346+368A>G | SHOX2 | ENSG00000168779.21 | transcript | ENST00000483851.7 | protein_coding | 1/4 | chr3 | 158105311 | |||||||
| chr3:158105320 | C | G | 1 | a0001c0001t0007g0047 | 1 | NA18747.hp2 | intron_variant | MODIFIER | c.346+359G>C | SHOX2 | ENSG00000168779.21 | transcript | ENST00000483851.7 | protein_coding | 1/4 | chr3 | 158105320 | |||||||
| chr3:158105357 | C | T | 1 | a0001c0001t0030g0046 | 1 | NA18979.hp2 | intron_variant | MODIFIER | c.346+322G>A | SHOX2 | ENSG00000168779.21 | transcript | ENST00000483851.7 | protein_coding | 1/4 | chr3 | 158105357 | |||||||
| chr3:158105377 | G | A | 1 | a0001c0001t0030g0046 | 1 | NA18979.hp2 | intron_variant | MODIFIER | c.346+302C>T | SHOX2 | ENSG00000168779.21 | transcript | ENST00000483851.7 | protein_coding | 1/4 | chr3 | 158105377 | |||||||
| chr3:158105380 | C | G | 1 | a0001c0001t0030g0046 | 1 | NA18979.hp2 | intron_variant | MODIFIER | c.346+299G>C | SHOX2 | ENSG00000168779.21 | transcript | ENST00000483851.7 | protein_coding | 1/4 | chr3 | 158105380 | |||||||
| chr3:158105386 | C | A | 1 | a0001c0001t0030g0046 | 1 | NA18979.hp2 | intron_variant | MODIFIER | c.346+293G>T | SHOX2 | ENSG00000168779.21 | transcript | ENST00000483851.7 | protein_coding | 1/4 | chr3 | 158105386 | |||||||
| chr3:158105389 | C | T | 1 | a0001c0001t0030g0046 | 1 | NA18979.hp2 | intron_variant | MODIFIER | c.346+290G>A | SHOX2 | ENSG00000168779.21 | transcript | ENST00000483851.7 | protein_coding | 1/4 | chr3 | 158105389 | |||||||
| chr3:158105390 | C | G | 1 | a0001c0001t0030g0046 | 1 | NA18979.hp2 | intron_variant | MODIFIER | c.346+289G>C | SHOX2 | ENSG00000168779.21 | transcript | ENST00000483851.7 | protein_coding | 1/4 | chr3 | 158105390 | |||||||
| chr3:158105391 | G | A | 1 | a0001c0001t0030g0046 | 1 | NA18979.hp2 | intron_variant | MODIFIER | c.346+288C>T | SHOX2 | ENSG00000168779.21 | transcript | ENST00000483851.7 | protein_coding | 1/4 | chr3 | 158105391 | |||||||
| chr3:158105392 | C | G | 1 | a0001c0001t0030g0046 | 1 | NA18979.hp2 | intron_variant | MODIFIER | c.346+287G>C | SHOX2 | ENSG00000168779.21 | transcript | ENST00000483851.7 | protein_coding | 1/4 | chr3 | 158105392 | |||||||
| chr3:158105395 | G | A | 1 | a0001c0001t0030g0046 | 1 | NA18979.hp2 | intron_variant | MODIFIER | c.346+284C>T | SHOX2 | ENSG00000168779.21 | transcript | ENST00000483851.7 | protein_coding | 1/4 | chr3 | 158105395 | |||||||
| chr3:158105398 | A | AATAGAAA others(5): Show |
1 | a0001c0001t0030g0046 | 1 | NA18979.hp2 | intron_variant | MODIFIER | c.346+280_346+281ins others(12): Show |
SHOX2 | ENSG00000168779.21 | transcript | ENST00000483851.7 | protein_coding | 1/4 | chr3 | 158105398 | |||||||
| chr3:158105446 | AC | A | 6 | a0001c0001t0001g0007 a0001c0001t0001g0078 a0001c0001t0001g0079 others(3): Show |
20 | HG01257.hp1 HG02080.hp2 HG02129.hp1 others(17): Show |
intron_variant | MODIFIER | c.346+232delG | SHOX2 | ENSG00000168779.21 | transcript | ENST00000483851.7 | protein_coding | 1/4 | chr3 | 158105446 | |||||||
| chr3:158105604 | G | A | 1 | a0001c0001t0002g0080 | 1 | HG04184.hp2 | intron_variant | MODIFIER | c.346+75C>T | SHOX2 | ENSG00000168779.21 | transcript | ENST00000483851.7 | protein_coding | 1/4 | chr3 | 158105604 | |||||||
| chr3:158105616 | C | T | 1 | a0001c0001t0002g0022 | 2 | HG01261.hp1 HG01978.hp2 |
intron_variant | MODIFIER | c.346+63G>A | SHOX2 | ENSG00000168779.21 | transcript | ENST00000483851.7 | protein_coding | 1/4 | chr3 | 158105616 | |||||||
| chr3:158105658 | G | C | 3 | a0001c0002t0009g0020 a0001c0002t0009g0081 a0001c0002t0038g0082 |
5 | HG02698.hp1 HG02735.hp2 NA18945.hp2 others(2): Show |
intron_variant | MODIFIER | c.346+21C>G | SHOX2 | ENSG00000168779.21 | transcript | ENST00000483851.7 | protein_coding | 1/4 | chr3 | 158105658 |