Joint Open Genome and Omics Platform (JoGo)

Search by Genic region

geneid	64847
ensemblid	ENSG00000006282.22
hgncid	26125
symbol	SPATA20
name	spermatogenesis associated 20
refseq_nuc	NM_022827.4
refseq_prot	NP_073738.2
ensembl_nuc	ENST00000006658.11
ensembl_prot	ENSP00000006658.6
mane_status	MANE Select
chr	chr17
start	50547174
end	50555852
strand	+
ver	v1.2
region	chr17:50547174-50555852
region5000	chr17:50542174-50560852
regionname0	SPATA20_chr17_50547174_50555852
regionname5000	SPATA20_chr17_50542174_50560852

ahapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	alen	total	AFR	AMR	EAS	EUR	SAS	JPT	regionname	genename	aa	chr	start	end
a0001	0/1	802	149	21	31	67	6	23	41	SPATA20_chr17_50542174_50560852	SPATA20	copy fasta	chr17	50542174	50560852
a0002	0/0	802	97	58	16	12	5	6	10	SPATA20_chr17_50542174_50560852	SPATA20	copy fasta	chr17	50542174	50560852
a0003	1/0	802	37	0	16	8	3	9	8	SPATA20_chr17_50542174_50560852	SPATA20	copy fasta	chr17	50542174	50560852
a0004	0/0	802	22	9	6	5	1	1	3	SPATA20_chr17_50542174_50560852	SPATA20	copy fasta	chr17	50542174	50560852
a0005	0/0	802	10	0	3	0	2	5	0	SPATA20_chr17_50542174_50560852	SPATA20	copy fasta	chr17	50542174	50560852
a0006	0/0	802	3	0	0	3	0	0	2	SPATA20_chr17_50542174_50560852	SPATA20	copy fasta	chr17	50542174	50560852
a0007	0/0	802	3	1	2	0	0	0	0	SPATA20_chr17_50542174_50560852	SPATA20	copy fasta	chr17	50542174	50560852
a0008	0/0	802	2	0	1	0	1	0	0	SPATA20_chr17_50542174_50560852	SPATA20	copy fasta	chr17	50542174	50560852
a0009	0/0	802	2	0	0	2	0	0	2	SPATA20_chr17_50542174_50560852	SPATA20	copy fasta	chr17	50542174	50560852
a0010	0/0	802	1	1	0	0	0	0	0	SPATA20_chr17_50542174_50560852	SPATA20	copy fasta	chr17	50542174	50560852
a0011	0/0	802	1	1	0	0	0	0	0	SPATA20_chr17_50542174_50560852	SPATA20	copy fasta	chr17	50542174	50560852
a0012	0/0	802	1	0	1	0	0	0	0	SPATA20_chr17_50542174_50560852	SPATA20	copy fasta	chr17	50542174	50560852
a0013	0/0	802	1	0	0	1	0	0	1	SPATA20_chr17_50542174_50560852	SPATA20	copy fasta	chr17	50542174	50560852
a0014	0/0	802	1	0	0	1	0	0	0	SPATA20_chr17_50542174_50560852	SPATA20	copy fasta	chr17	50542174	50560852
a0015	0/0	802	1	0	0	1	0	0	1	SPATA20_chr17_50542174_50560852	SPATA20	copy fasta	chr17	50542174	50560852
a0016	0/0	802	1	1	0	0	0	0	0	SPATA20_chr17_50542174_50560852	SPATA20	copy fasta	chr17	50542174	50560852
a0017	0/0	802	1	1	0	0	0	0	0	SPATA20_chr17_50542174_50560852	SPATA20	copy fasta	chr17	50542174	50560852
a0018	0/0	802	1	1	0	0	0	0	0	SPATA20_chr17_50542174_50560852	SPATA20	copy fasta	chr17	50542174	50560852

chapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	clen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	cseq	chr	start	end
c0001	0/1	2409	142	20	27	67	6	21	SPATA20_chr17_50542174_50560852	SPATA20	copy fasta	chr17	50542174	50560852
c0002	0/0	2409	93	58	16	9	4	6	SPATA20_chr17_50542174_50560852	SPATA20	copy fasta	chr17	50542174	50560852
c0003	1/0	2409	36	0	15	8	3	9	SPATA20_chr17_50542174_50560852	SPATA20	copy fasta	chr17	50542174	50560852
c0004	0/0	2409	21	9	6	5	1	0	SPATA20_chr17_50542174_50560852	SPATA20	copy fasta	chr17	50542174	50560852
c0005	0/0	2409	10	0	3	0	2	5	SPATA20_chr17_50542174_50560852	SPATA20	copy fasta	chr17	50542174	50560852
c0006	0/0	2409	4	0	2	0	0	2	SPATA20_chr17_50542174_50560852	SPATA20	copy fasta	chr17	50542174	50560852
c0007	0/0	2409	3	1	2	0	0	0	SPATA20_chr17_50542174_50560852	SPATA20	copy fasta	chr17	50542174	50560852
c0008	0/0	2409	3	0	0	3	0	0	SPATA20_chr17_50542174_50560852	SPATA20	copy fasta	chr17	50542174	50560852
c0009	0/0	2409	3	0	0	3	0	0	SPATA20_chr17_50542174_50560852	SPATA20	copy fasta	chr17	50542174	50560852
c0010	0/0	2409	2	0	0	2	0	0	SPATA20_chr17_50542174_50560852	SPATA20	copy fasta	chr17	50542174	50560852
c0011	0/0	2409	2	0	1	0	1	0	SPATA20_chr17_50542174_50560852	SPATA20	copy fasta	chr17	50542174	50560852
c0012	0/0	2409	1	0	0	1	0	0	SPATA20_chr17_50542174_50560852	SPATA20	copy fasta	chr17	50542174	50560852
c0013	0/0	2409	1	0	0	1	0	0	SPATA20_chr17_50542174_50560852	SPATA20	copy fasta	chr17	50542174	50560852
c0014	0/0	2409	1	0	1	0	0	0	SPATA20_chr17_50542174_50560852	SPATA20	copy fasta	chr17	50542174	50560852
c0015	0/0	2409	1	1	0	0	0	0	SPATA20_chr17_50542174_50560852	SPATA20	copy fasta	chr17	50542174	50560852
c0016	0/0	2409	1	1	0	0	0	0	SPATA20_chr17_50542174_50560852	SPATA20	copy fasta	chr17	50542174	50560852
c0017	0/0	2409	1	0	0	1	0	0	SPATA20_chr17_50542174_50560852	SPATA20	copy fasta	chr17	50542174	50560852
c0018	0/0	2409	1	0	1	0	0	0	SPATA20_chr17_50542174_50560852	SPATA20	copy fasta	chr17	50542174	50560852
c0019	0/0	2409	1	1	0	0	0	0	SPATA20_chr17_50542174_50560852	SPATA20	copy fasta	chr17	50542174	50560852
c0020	0/0	2409	1	0	0	0	0	1	SPATA20_chr17_50542174_50560852	SPATA20	copy fasta	chr17	50542174	50560852
c0021	0/0	2409	1	0	1	0	0	0	SPATA20_chr17_50542174_50560852	SPATA20	copy fasta	chr17	50542174	50560852
c0022	0/0	2409	1	1	0	0	0	0	SPATA20_chr17_50542174_50560852	SPATA20	copy fasta	chr17	50542174	50560852
c0023	0/0	2409	1	0	1	0	0	0	SPATA20_chr17_50542174_50560852	SPATA20	copy fasta	chr17	50542174	50560852
c0024	0/0	2409	1	1	0	0	0	0	SPATA20_chr17_50542174_50560852	SPATA20	copy fasta	chr17	50542174	50560852
c0025	0/0	2409	1	0	0	0	1	0	SPATA20_chr17_50542174_50560852	SPATA20	copy fasta	chr17	50542174	50560852
c0026	0/0	2409	1	1	0	0	0	0	SPATA20_chr17_50542174_50560852	SPATA20	copy fasta	chr17	50542174	50560852

thapid	grch38 chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	tlen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	tseq	chr	start	end
t0001	1/1	226	311	85	70	95	17	42	SPATA20_chr17_50542174_50560852	SPATA20	copy fasta	chr17	50542174	50560852
t0002	0/0	226	22	9	6	5	1	1	SPATA20_chr17_50542174_50560852	SPATA20	copy fasta	chr17	50542174	50560852
t0003	0/0	226	1	0	0	0	0	1	SPATA20_chr17_50542174_50560852	SPATA20	copy fasta	chr17	50542174	50560852

ghapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	chr	start	end
g0001	0/1	96	6	24	49	2	14	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
g0002	0/0	53	29	12	6	1	5	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
g0003	0/0	14	0	4	6	1	3	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
g0004	0/0	11	0	5	4	1	1	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
g0005	0/0	9	0	3	3	0	3	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
g0006	0/0	8	0	1	3	3	1	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
g0007	0/0	8	0	0	5	0	3	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
g0008	0/0	8	6	0	0	2	0	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
g0009	1/0	7	0	5	0	1	0	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
g0010	0/0	6	0	0	2	0	4	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
g0011	0/0	5	1	0	4	0	0	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
g0012	0/0	5	4	1	0	0	0	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
g0013	0/0	5	0	4	0	1	0	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
g0014	0/0	4	0	1	2	0	1	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
g0015	0/0	4	4	0	0	0	0	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
g0016	0/0	4	2	2	0	0	0	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
g0017	0/0	4	2	2	0	0	0	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
g0018	0/0	4	0	1	0	2	1	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
g0019	0/0	3	3	0	0	0	0	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
g0020	0/0	3	3	0	0	0	0	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
g0021	0/0	3	3	0	0	0	0	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
g0022	0/0	3	0	0	3	0	0	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
g0023	0/0	2	0	1	1	0	0	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
g0024	0/0	2	2	0	0	0	0	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
g0025	0/0	2	0	0	0	0	2	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
g0026	0/0	2	0	0	0	0	2	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
g0027	0/0	2	2	0	0	0	0	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
g0028	0/0	2	0	1	0	1	0	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
g0029	0/0	2	2	0	0	0	0	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
g0030	0/0	2	1	1	0	0	0	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
g0031	0/0	2	2	0	0	0	0	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
g0032	0/0	1	0	0	1	0	0	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
g0033	0/0	1	1	0	0	0	0	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
g0034	0/0	1	0	0	1	0	0	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
g0035	0/0	1	0	1	0	0	0	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
g0036	0/0	1	1	0	0	0	0	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
g0037	0/0	1	0	1	0	0	0	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
g0038	0/0	1	0	0	1	0	0	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
g0039	0/0	1	0	0	1	0	0	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
g0040	0/0	1	0	0	1	0	0	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
g0041	0/0	1	0	0	0	1	0	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
g0042	0/0	1	0	1	0	0	0	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
g0043	0/0	1	0	0	1	0	0	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
g0044	0/0	1	0	0	1	0	0	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
g0045	0/0	1	0	0	1	0	0	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
g0046	0/0	1	0	1	0	0	0	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
g0047	0/0	1	0	1	0	0	0	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
g0048	0/0	1	0	1	0	0	0	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
g0049	0/0	1	0	0	0	0	1	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
g0050	0/0	1	0	1	0	0	0	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
g0051	0/0	1	0	0	0	0	1	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
g0052	0/0	1	1	0	0	0	0	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
g0053	0/0	1	1	0	0	0	0	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
g0054	0/0	1	1	0	0	0	0	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
g0055	0/0	1	1	0	0	0	0	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
g0056	0/0	1	0	0	1	0	0	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
g0057	0/0	1	1	0	0	0	0	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
g0058	0/0	1	1	0	0	0	0	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
g0059	0/0	1	1	0	0	0	0	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
g0060	0/0	1	1	0	0	0	0	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
g0061	0/0	1	0	0	1	0	0	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
g0062	0/0	1	0	0	1	0	0	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
g0063	0/0	1	0	0	0	1	0	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
g0064	0/0	1	0	0	0	1	0	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
g0065	0/0	1	1	0	0	0	0	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
g0066	0/0	1	1	0	0	0	0	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
g0067	0/0	1	1	0	0	0	0	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
g0068	0/0	1	1	0	0	0	0	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
g0069	0/0	1	0	1	0	0	0	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
g0070	0/0	1	1	0	0	0	0	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
g0071	0/0	1	0	0	0	0	1	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
g0072	0/0	1	1	0	0	0	0	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
g0073	0/0	1	1	0	0	0	0	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
g0074	0/0	1	0	0	1	0	0	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
g0075	0/0	1	1	0	0	0	0	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
g0076	0/0	1	1	0	0	0	0	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
g0077	0/0	1	1	0	0	0	0	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
g0078	0/0	1	0	0	0	0	1	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
g0079	0/0	1	1	0	0	0	0	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
g0080	0/0	1	1	0	0	0	0	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852

achapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	clen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	cseq	chr	start	end
a0001c0001	0/1	2409	142	20	27	67	6	21	SPATA20_chr17_50542174_50560852	SPATA20	copy fasta	chr17	50542174	50560852
a0001c0006	0/0	2409	4	0	2	0	0	2	SPATA20_chr17_50542174_50560852	SPATA20	copy fasta	chr17	50542174	50560852
a0001c0016	0/0	2409	1	1	0	0	0	0	SPATA20_chr17_50542174_50560852	SPATA20	copy fasta	chr17	50542174	50560852
a0001c0018	0/0	2409	1	0	1	0	0	0	SPATA20_chr17_50542174_50560852	SPATA20	copy fasta	chr17	50542174	50560852
a0001c0021	0/0	2409	1	0	1	0	0	0	SPATA20_chr17_50542174_50560852	SPATA20	copy fasta	chr17	50542174	50560852
a0002c0002	0/0	2409	93	58	16	9	4	6	SPATA20_chr17_50542174_50560852	SPATA20	copy fasta	chr17	50542174	50560852
a0002c0008	0/0	2409	3	0	0	3	0	0	SPATA20_chr17_50542174_50560852	SPATA20	copy fasta	chr17	50542174	50560852
a0002c0025	0/0	2409	1	0	0	0	1	0	SPATA20_chr17_50542174_50560852	SPATA20	copy fasta	chr17	50542174	50560852
a0003c0003	1/0	2409	36	0	15	8	3	9	SPATA20_chr17_50542174_50560852	SPATA20	copy fasta	chr17	50542174	50560852
a0003c0014	0/0	2409	1	0	1	0	0	0	SPATA20_chr17_50542174_50560852	SPATA20	copy fasta	chr17	50542174	50560852
a0004c0004	0/0	2409	21	9	6	5	1	0	SPATA20_chr17_50542174_50560852	SPATA20	copy fasta	chr17	50542174	50560852
a0004c0020	0/0	2409	1	0	0	0	0	1	SPATA20_chr17_50542174_50560852	SPATA20	copy fasta	chr17	50542174	50560852
a0005c0005	0/0	2409	10	0	3	0	2	5	SPATA20_chr17_50542174_50560852	SPATA20	copy fasta	chr17	50542174	50560852
a0006c0009	0/0	2409	3	0	0	3	0	0	SPATA20_chr17_50542174_50560852	SPATA20	copy fasta	chr17	50542174	50560852
a0007c0007	0/0	2409	3	1	2	0	0	0	SPATA20_chr17_50542174_50560852	SPATA20	copy fasta	chr17	50542174	50560852
a0008c0011	0/0	2409	2	0	1	0	1	0	SPATA20_chr17_50542174_50560852	SPATA20	copy fasta	chr17	50542174	50560852
a0009c0010	0/0	2409	2	0	0	2	0	0	SPATA20_chr17_50542174_50560852	SPATA20	copy fasta	chr17	50542174	50560852
a0010c0022	0/0	2409	1	1	0	0	0	0	SPATA20_chr17_50542174_50560852	SPATA20	copy fasta	chr17	50542174	50560852
a0011c0024	0/0	2409	1	1	0	0	0	0	SPATA20_chr17_50542174_50560852	SPATA20	copy fasta	chr17	50542174	50560852
a0012c0023	0/0	2409	1	0	1	0	0	0	SPATA20_chr17_50542174_50560852	SPATA20	copy fasta	chr17	50542174	50560852
a0013c0012	0/0	2409	1	0	0	1	0	0	SPATA20_chr17_50542174_50560852	SPATA20	copy fasta	chr17	50542174	50560852
a0014c0013	0/0	2409	1	0	0	1	0	0	SPATA20_chr17_50542174_50560852	SPATA20	copy fasta	chr17	50542174	50560852
a0015c0017	0/0	2409	1	0	0	1	0	0	SPATA20_chr17_50542174_50560852	SPATA20	copy fasta	chr17	50542174	50560852
a0016c0015	0/0	2409	1	1	0	0	0	0	SPATA20_chr17_50542174_50560852	SPATA20	copy fasta	chr17	50542174	50560852
a0017c0019	0/0	2409	1	1	0	0	0	0	SPATA20_chr17_50542174_50560852	SPATA20	copy fasta	chr17	50542174	50560852
a0018c0026	0/0	2409	1	1	0	0	0	0	SPATA20_chr17_50542174_50560852	SPATA20	copy fasta	chr17	50542174	50560852

acthapid	grch38 chm13v2	tlen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	tseq	chr	start	end
a0001c0001t0001	0/1	2634	141	20	27	67	6	20	SPATA20_chr17_50542174_50560852	SPATA20	copy fasta	chr17	50542174	50560852
a0001c0001t0003	0/0	2634	1	0	0	0	0	1	SPATA20_chr17_50542174_50560852	SPATA20	copy fasta	chr17	50542174	50560852
a0001c0006t0001	0/0	2634	4	0	2	0	0	2	SPATA20_chr17_50542174_50560852	SPATA20	copy fasta	chr17	50542174	50560852
a0001c0016t0001	0/0	2634	1	1	0	0	0	0	SPATA20_chr17_50542174_50560852	SPATA20	copy fasta	chr17	50542174	50560852
a0001c0018t0001	0/0	2634	1	0	1	0	0	0	SPATA20_chr17_50542174_50560852	SPATA20	copy fasta	chr17	50542174	50560852
a0001c0021t0001	0/0	2634	1	0	1	0	0	0	SPATA20_chr17_50542174_50560852	SPATA20	copy fasta	chr17	50542174	50560852
a0002c0002t0001	0/0	2634	93	58	16	9	4	6	SPATA20_chr17_50542174_50560852	SPATA20	copy fasta	chr17	50542174	50560852
a0002c0008t0001	0/0	2634	3	0	0	3	0	0	SPATA20_chr17_50542174_50560852	SPATA20	copy fasta	chr17	50542174	50560852
a0002c0025t0001	0/0	2634	1	0	0	0	1	0	SPATA20_chr17_50542174_50560852	SPATA20	copy fasta	chr17	50542174	50560852
a0003c0003t0001	1/0	2634	36	0	15	8	3	9	SPATA20_chr17_50542174_50560852	SPATA20	copy fasta	chr17	50542174	50560852
a0003c0014t0001	0/0	2634	1	0	1	0	0	0	SPATA20_chr17_50542174_50560852	SPATA20	copy fasta	chr17	50542174	50560852
a0004c0004t0002	0/0	2634	21	9	6	5	1	0	SPATA20_chr17_50542174_50560852	SPATA20	copy fasta	chr17	50542174	50560852
a0004c0020t0002	0/0	2634	1	0	0	0	0	1	SPATA20_chr17_50542174_50560852	SPATA20	copy fasta	chr17	50542174	50560852
a0005c0005t0001	0/0	2634	10	0	3	0	2	5	SPATA20_chr17_50542174_50560852	SPATA20	copy fasta	chr17	50542174	50560852
a0006c0009t0001	0/0	2634	3	0	0	3	0	0	SPATA20_chr17_50542174_50560852	SPATA20	copy fasta	chr17	50542174	50560852
a0007c0007t0001	0/0	2634	3	1	2	0	0	0	SPATA20_chr17_50542174_50560852	SPATA20	copy fasta	chr17	50542174	50560852
a0008c0011t0001	0/0	2634	2	0	1	0	1	0	SPATA20_chr17_50542174_50560852	SPATA20	copy fasta	chr17	50542174	50560852
a0009c0010t0001	0/0	2634	2	0	0	2	0	0	SPATA20_chr17_50542174_50560852	SPATA20	copy fasta	chr17	50542174	50560852
a0010c0022t0001	0/0	2634	1	1	0	0	0	0	SPATA20_chr17_50542174_50560852	SPATA20	copy fasta	chr17	50542174	50560852
a0011c0024t0001	0/0	2634	1	1	0	0	0	0	SPATA20_chr17_50542174_50560852	SPATA20	copy fasta	chr17	50542174	50560852
a0012c0023t0001	0/0	2634	1	0	1	0	0	0	SPATA20_chr17_50542174_50560852	SPATA20	copy fasta	chr17	50542174	50560852
a0013c0012t0001	0/0	2634	1	0	0	1	0	0	SPATA20_chr17_50542174_50560852	SPATA20	copy fasta	chr17	50542174	50560852
a0014c0013t0001	0/0	2634	1	0	0	1	0	0	SPATA20_chr17_50542174_50560852	SPATA20	copy fasta	chr17	50542174	50560852
a0015c0017t0001	0/0	2634	1	0	0	1	0	0	SPATA20_chr17_50542174_50560852	SPATA20	copy fasta	chr17	50542174	50560852
a0016c0015t0001	0/0	2634	1	1	0	0	0	0	SPATA20_chr17_50542174_50560852	SPATA20	copy fasta	chr17	50542174	50560852
a0017c0019t0001	0/0	2634	1	1	0	0	0	0	SPATA20_chr17_50542174_50560852	SPATA20	copy fasta	chr17	50542174	50560852
a0018c0026t0001	0/0	2634	1	1	0	0	0	0	SPATA20_chr17_50542174_50560852	SPATA20	copy fasta	chr17	50542174	50560852

actghapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	chr	start	end
a0001c0001t0001g0001	0/1	89	6	23	45	2	12	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
a0001c0001t0001g0006	0/0	7	0	1	2	3	1	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
a0001c0001t0001g0007	0/0	7	0	0	5	0	2	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
a0001c0001t0001g0010	0/0	6	0	0	2	0	4	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
a0001c0001t0001g0011	0/0	5	1	0	4	0	0	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
a0001c0001t0001g0017	0/0	1	1	0	0	0	0	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
a0001c0001t0001g0023	0/0	2	0	1	1	0	0	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
a0001c0001t0001g0024	0/0	2	2	0	0	0	0	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
a0001c0001t0001g0027	0/0	2	2	0	0	0	0	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
a0001c0001t0001g0032	0/0	1	0	0	1	0	0	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
a0001c0001t0001g0034	0/0	1	0	0	1	0	0	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
a0001c0001t0001g0036	0/0	1	1	0	0	0	0	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
a0001c0001t0001g0037	0/0	1	0	1	0	0	0	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
a0001c0001t0001g0038	0/0	1	0	0	1	0	0	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
a0001c0001t0001g0039	0/0	1	0	0	1	0	0	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
a0001c0001t0001g0040	0/0	1	0	0	1	0	0	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
a0001c0001t0001g0041	0/0	1	0	0	0	1	0	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
a0001c0001t0001g0043	0/0	1	0	0	1	0	0	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
a0001c0001t0001g0044	0/0	1	0	0	1	0	0	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
a0001c0001t0001g0045	0/0	1	0	0	1	0	0	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
a0001c0001t0001g0047	0/0	1	0	1	0	0	0	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
a0001c0001t0001g0049	0/0	1	0	0	0	0	1	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
a0001c0001t0001g0052	0/0	1	1	0	0	0	0	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
a0001c0001t0001g0054	0/0	1	1	0	0	0	0	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
a0001c0001t0001g0055	0/0	1	1	0	0	0	0	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
a0001c0001t0001g0075	0/0	1	1	0	0	0	0	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
a0001c0001t0001g0076	0/0	1	1	0	0	0	0	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
a0001c0001t0001g0079	0/0	1	1	0	0	0	0	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
a0001c0001t0001g0080	0/0	1	1	0	0	0	0	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
a0001c0001t0003g0007	0/0	1	0	0	0	0	1	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
a0001c0006t0001g0001	0/0	2	0	0	0	0	2	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
a0001c0006t0001g0035	0/0	1	0	1	0	0	0	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
a0001c0006t0001g0046	0/0	1	0	1	0	0	0	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
a0001c0016t0001g0060	0/0	1	1	0	0	0	0	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
a0001c0018t0001g0042	0/0	1	0	1	0	0	0	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
a0001c0021t0001g0001	0/0	1	0	1	0	0	0	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
a0002c0002t0001g0002	0/0	52	28	12	6	1	5	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
a0002c0002t0001g0008	0/0	8	6	0	0	2	0	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
a0002c0002t0001g0016	0/0	4	2	2	0	0	0	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
a0002c0002t0001g0019	0/0	3	3	0	0	0	0	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
a0002c0002t0001g0020	0/0	3	3	0	0	0	0	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
a0002c0002t0001g0021	0/0	3	3	0	0	0	0	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
a0002c0002t0001g0029	0/0	2	2	0	0	0	0	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
a0002c0002t0001g0030	0/0	2	1	1	0	0	0	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
a0002c0002t0001g0031	0/0	2	2	0	0	0	0	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
a0002c0002t0001g0056	0/0	1	0	0	1	0	0	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
a0002c0002t0001g0057	0/0	1	1	0	0	0	0	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
a0002c0002t0001g0058	0/0	1	1	0	0	0	0	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
a0002c0002t0001g0062	0/0	1	0	0	1	0	0	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
a0002c0002t0001g0064	0/0	1	0	0	0	1	0	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
a0002c0002t0001g0065	0/0	1	1	0	0	0	0	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
a0002c0002t0001g0066	0/0	1	1	0	0	0	0	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
a0002c0002t0001g0067	0/0	1	1	0	0	0	0	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
a0002c0002t0001g0069	0/0	1	0	1	0	0	0	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
a0002c0002t0001g0070	0/0	1	1	0	0	0	0	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
a0002c0002t0001g0071	0/0	1	0	0	0	0	1	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
a0002c0002t0001g0072	0/0	1	1	0	0	0	0	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
a0002c0002t0001g0073	0/0	1	1	0	0	0	0	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
a0002c0002t0001g0074	0/0	1	0	0	1	0	0	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
a0002c0008t0001g0022	0/0	3	0	0	3	0	0	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
a0002c0025t0001g0063	0/0	1	0	0	0	1	0	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
a0003c0003t0001g0003	0/0	14	0	4	6	1	3	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
a0003c0003t0001g0009	1/0	7	0	5	0	1	0	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
a0003c0003t0001g0013	0/0	4	0	3	0	1	0	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
a0003c0003t0001g0014	0/0	4	0	1	2	0	1	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
a0003c0003t0001g0025	0/0	2	0	0	0	0	2	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
a0003c0003t0001g0026	0/0	2	0	0	0	0	2	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
a0003c0003t0001g0048	0/0	1	0	1	0	0	0	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
a0003c0003t0001g0050	0/0	1	0	1	0	0	0	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
a0003c0003t0001g0051	0/0	1	0	0	0	0	1	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
a0003c0014t0001g0013	0/0	1	0	1	0	0	0	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
a0004c0004t0002g0004	0/0	10	0	5	4	1	0	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
a0004c0004t0002g0012	0/0	5	4	1	0	0	0	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
a0004c0004t0002g0015	0/0	4	4	0	0	0	0	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
a0004c0004t0002g0059	0/0	1	1	0	0	0	0	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
a0004c0004t0002g0061	0/0	1	0	0	1	0	0	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
a0004c0020t0002g0004	0/0	1	0	0	0	0	1	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
a0005c0005t0001g0005	0/0	6	0	3	0	0	3	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
a0005c0005t0001g0018	0/0	3	0	0	0	2	1	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
a0005c0005t0001g0078	0/0	1	0	0	0	0	1	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
a0006c0009t0001g0005	0/0	3	0	0	3	0	0	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
a0007c0007t0001g0017	0/0	3	1	2	0	0	0	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
a0008c0011t0001g0028	0/0	2	0	1	0	1	0	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
a0009c0010t0001g0001	0/0	2	0	0	2	0	0	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
a0010c0022t0001g0002	0/0	1	1	0	0	0	0	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
a0011c0024t0001g0068	0/0	1	1	0	0	0	0	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
a0012c0023t0001g0018	0/0	1	0	1	0	0	0	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
a0013c0012t0001g0001	0/0	1	0	0	1	0	0	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
a0014c0013t0001g0006	0/0	1	0	0	1	0	0	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
a0015c0017t0001g0001	0/0	1	0	0	1	0	0	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
a0016c0015t0001g0077	0/0	1	1	0	0	0	0	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
a0017c0019t0001g0053	0/0	1	1	0	0	0	0	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
a0018c0026t0001g0033	0/0	1	1	0	0	0	0	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852

sampleid	ID haplotypeid	ahapid	chapid	thapid	ghapid	gpopname	popname	regionname	genename	chr	start	end
HG00099	hp1	a0001	c0001	t0001	g0006	EUR	GBR	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
HG00099	hp2	a0002	c0002	t0001	g0002	EUR	GBR	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
HG00140	hp1	a0005	c0005	t0001	g0018	EUR	GBR	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
HG00140	hp2	a0001	c0001	t0001	g0001	EUR	GBR	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
HG00280	hp1	a0005	c0005	t0001	g0018	EUR	FIN	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
HG00280	hp2	a0001	c0001	t0001	g0041	EUR	FIN	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
HG00323	hp1	a0003	c0003	t0001	g0009	EUR	FIN	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
HG00323	hp2	a0003	c0003	t0001	g0013	EUR	FIN	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
HG00408	hp1	a0001	c0001	t0001	g0001	EAS	CHS	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
HG00408	hp2	a0001	c0001	t0001	g0001	EAS	CHS	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
HG00597	hp1	a0001	c0001	t0001	g0001	EAS	CHS	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
HG00597	hp2	a0001	c0001	t0001	g0043	EAS	CHS	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
HG00621	hp1	a0001	c0001	t0001	g0001	EAS	CHS	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
HG00621	hp2	a0001	c0001	t0001	g0001	EAS	CHS	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
HG00639	hp1	a0001	c0001	t0001	g0001	AMR	PUR	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
HG00639	hp2	a0001	c0001	t0001	g0001	AMR	PUR	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
HG00642	hp1	a0002	c0002	t0001	g0002	AMR	PUR	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
HG00642	hp2	a0002	c0002	t0001	g0069	AMR	PUR	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
HG00673	hp1	a0001	c0001	t0001	g0001	EAS	CHS	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
HG00673	hp2	a0001	c0001	t0001	g0010	EAS	CHS	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
HG00733	hp1	a0001	c0001	t0001	g0006	AMR	PUR	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
HG00733	hp2	a0008	c0011	t0001	g0028	AMR	PUR	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
HG00735	hp1	a0003	c0003	t0001	g0003	AMR	PUR	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
HG00735	hp2	a0003	c0003	t0001	g0050	AMR	PUR	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
HG00738	hp1	a0001	c0001	t0001	g0001	AMR	PUR	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
HG00738	hp2	a0002	c0002	t0001	g0002	AMR	PUR	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
HG00741	hp1	a0002	c0002	t0001	g0002	AMR	PUR	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
HG00741	hp2	a0003	c0003	t0001	g0014	AMR	PUR	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
HG01069	hp1	a0001	c0001	t0001	g0001	AMR	PUR	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
HG01069	hp2	a0002	c0002	t0001	g0016	AMR	PUR	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
HG01070	hp1	a0004	c0004	t0002	g0004	AMR	PUR	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
HG01070	hp2	a0001	c0001	t0001	g0001	AMR	PUR	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
HG01071	hp1	a0002	c0002	t0001	g0016	AMR	PUR	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
HG01071	hp2	a0001	c0001	t0001	g0001	AMR	PUR	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
HG01074	hp1	a0005	c0005	t0001	g0005	AMR	PUR	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
HG01074	hp2	a0002	c0002	t0001	g0002	AMR	PUR	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
HG01081	hp1	a0001	c0001	t0001	g0001	AMR	PUR	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
HG01081	hp2	a0001	c0001	t0001	g0001	AMR	PUR	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
HG01099	hp1	a0002	c0002	t0001	g0002	AMR	PUR	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
HG01099	hp2	a0001	c0001	t0001	g0001	AMR	PUR	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
HG01106	hp1	a0001	c0001	t0001	g0023	AMR	PUR	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
HG01106	hp2	a0002	c0002	t0001	g0002	AMR	PUR	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
HG01109	hp1	a0001	c0001	t0001	g0001	AMR	PUR	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
HG01109	hp2	a0001	c0001	t0001	g0047	AMR	PUR	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
HG01167	hp1	a0001	c0001	t0001	g0037	AMR	PUR	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
HG01167	hp2	a0007	c0007	t0001	g0017	AMR	PUR	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
HG01168	hp1	a0001	c0018	t0001	g0042	AMR	PUR	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
HG01168	hp2	a0002	c0002	t0001	g0002	AMR	PUR	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
HG01169	hp1	a0007	c0007	t0001	g0017	AMR	PUR	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
HG01169	hp2	a0002	c0002	t0001	g0002	AMR	PUR	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
HG01175	hp1	a0002	c0002	t0001	g0030	AMR	PUR	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
HG01175	hp2	a0003	c0003	t0001	g0003	AMR	PUR	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
HG01192	hp1	a0004	c0004	t0002	g0004	AMR	PUR	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
HG01192	hp2	a0001	c0006	t0001	g0035	AMR	PUR	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
HG01243	hp1	a0004	c0004	t0002	g0012	AMR	PUR	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
HG01243	hp2	a0002	c0002	t0001	g0002	AMR	PUR	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
HG01255	hp1	a0002	c0002	t0001	g0002	AMR	CLM	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
HG01255	hp2	a0003	c0003	t0001	g0009	AMR	CLM	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
HG01256	hp1	a0003	c0003	t0001	g0009	AMR	CLM	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
HG01256	hp2	a0003	c0003	t0001	g0013	AMR	CLM	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
HG01258	hp1	a0003	c0003	t0001	g0013	AMR	CLM	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
HG01258	hp2	a0003	c0003	t0001	g0003	AMR	CLM	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
HG01261	hp1	a0004	c0004	t0002	g0004	AMR	CLM	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
HG01261	hp2	a0005	c0005	t0001	g0005	AMR	CLM	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
HG01346	hp1	a0004	c0004	t0002	g0004	AMR	CLM	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
HG01346	hp2	a0003	c0003	t0001	g0003	AMR	CLM	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
HG01358	hp1	a0003	c0003	t0001	g0013	AMR	CLM	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
HG01358	hp2	a0003	c0003	t0001	g0048	AMR	CLM	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
HG01361	hp1	a0001	c0006	t0001	g0046	AMR	CLM	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
HG01361	hp2	a0001	c0001	t0001	g0001	AMR	CLM	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
HG01433	hp1	a0001	c0001	t0001	g0001	AMR	CLM	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
HG01433	hp2	a0001	c0001	t0001	g0001	AMR	CLM	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
HG01515	hp1	a0002	c0002	t0001	g0008	EUR	IBS	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
HG01515	hp2	a0003	c0003	t0001	g0003	EUR	IBS	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
HG01516	hp1	a0004	c0004	t0002	g0004	EUR	IBS	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
HG01516	hp2	a0001	c0001	t0001	g0006	EUR	IBS	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
HG01517	hp1	a0002	c0002	t0001	g0008	EUR	IBS	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
HG01517	hp2	a0001	c0001	t0001	g0006	EUR	IBS	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
HG01884	hp1	a0002	c0002	t0001	g0002	AFR	ACB	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
HG01884	hp2	a0002	c0002	t0001	g0020	AFR	ACB	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
HG01891	hp1	a0002	c0002	t0001	g0016	AFR	ACB	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
HG01891	hp2	a0004	c0004	t0002	g0015	AFR	ACB	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
HG01934	hp1	a0002	c0002	t0001	g0002	AMR	PEL	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
HG01934	hp2	a0001	c0001	t0001	g0001	AMR	PEL	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
HG01952	hp1	a0012	c0023	t0001	g0018	AMR	PEL	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
HG01952	hp2	a0001	c0001	t0001	g0001	AMR	PEL	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
HG01975	hp1	a0003	c0003	t0001	g0009	AMR	PEL	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
HG01975	hp2	a0001	c0001	t0001	g0001	AMR	PEL	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
HG01978	hp1	a0001	c0001	t0001	g0001	AMR	PEL	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
HG01978	hp2	a0001	c0001	t0001	g0001	AMR	PEL	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
HG01981	hp1	a0002	c0002	t0001	g0002	AMR	PEL	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
HG01981	hp2	a0001	c0001	t0001	g0001	AMR	PEL	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
HG01993	hp1	a0003	c0003	t0001	g0009	AMR	PEL	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
HG01993	hp2	a0001	c0001	t0001	g0001	AMR	PEL	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
HG02015	hp1	a0001	c0001	t0001	g0001	EAS	KHV	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
HG02015	hp2	a0001	c0001	t0001	g0001	EAS	KHV	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
HG02027	hp1	a0001	c0001	t0001	g0001	EAS	KHV	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
HG02027	hp2	a0014	c0013	t0001	g0006	EAS	KHV	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
HG02040	hp1	a0001	c0001	t0001	g0001	EAS	KHV	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
HG02040	hp2	a0001	c0001	t0001	g0001	EAS	KHV	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
HG02055	hp1	a0001	c0001	t0001	g0001	AFR	ACB	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
HG02055	hp2	a0002	c0002	t0001	g0002	AFR	ACB	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
HG02056	hp1	a0001	c0001	t0001	g0001	EAS	KHV	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
HG02056	hp2	a0001	c0001	t0001	g0001	EAS	KHV	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
HG02071	hp1	a0001	c0001	t0001	g0001	EAS	KHV	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
HG02071	hp2	a0004	c0004	t0002	g0004	EAS	KHV	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
HG02074	hp1	a0001	c0001	t0001	g0001	EAS	KHV	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
HG02074	hp2	a0002	c0002	t0001	g0074	EAS	KHV	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
HG02080	hp1	a0002	c0002	t0001	g0056	EAS	KHV	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
HG02080	hp2	a0001	c0001	t0001	g0006	EAS	KHV	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
HG02083	hp1	a0001	c0001	t0001	g0001	EAS	KHV	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
HG02083	hp2	a0001	c0001	t0001	g0007	EAS	KHV	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
HG02129	hp1	a0001	c0001	t0001	g0001	EAS	KHV	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
HG02129	hp2	a0001	c0001	t0001	g0001	EAS	KHV	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
HG02132	hp1	a0001	c0001	t0001	g0001	EAS	KHV	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
HG02132	hp2	a0001	c0001	t0001	g0001	EAS	KHV	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
HG02145	hp1	a0002	c0002	t0001	g0030	AFR	ACB	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
HG02145	hp2	a0004	c0004	t0002	g0012	AFR	ACB	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
HG02148	hp1	a0001	c0001	t0001	g0001	AMR	PEL	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
HG02148	hp2	a0001	c0021	t0001	g0001	AMR	PEL	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
HG02165	hp1	a0001	c0001	t0001	g0001	EAS	CDX	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
HG02165	hp2	a0001	c0001	t0001	g0034	EAS	CDX	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
HG02257	hp1	a0001	c0001	t0001	g0001	AFR	ACB	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
HG02257	hp2	a0001	c0001	t0001	g0001	AFR	ACB	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
HG02258	hp1	a0002	c0002	t0001	g0008	AFR	ACB	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
HG02258	hp2	a0002	c0002	t0001	g0021	AFR	ACB	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
HG02273	hp1	a0001	c0001	t0001	g0001	AMR	PEL	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
HG02273	hp2	a0003	c0003	t0001	g0009	AMR	PEL	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
HG02280	hp1	a0002	c0002	t0001	g0002	AFR	ACB	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
HG02280	hp2	a0002	c0002	t0001	g0002	AFR	ACB	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
HG02293	hp1	a0001	c0001	t0001	g0001	AMR	PEL	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
HG02293	hp2	a0004	c0004	t0002	g0004	AMR	PEL	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
HG02451	hp1	a0002	c0002	t0001	g0002	AFR	ACB	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
HG02451	hp2	a0011	c0024	t0001	g0068	AFR	ACB	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
HG02572	hp1	a0017	c0019	t0001	g0053	AFR	GWD	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
HG02572	hp2	a0004	c0004	t0002	g0059	AFR	GWD	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
HG02602	hp1	a0005	c0005	t0001	g0018	SAS	PJL	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
HG02602	hp2	a0001	c0001	t0003	g0007	SAS	PJL	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
HG02615	hp1	a0002	c0002	t0001	g0066	AFR	GWD	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
HG02615	hp2	a0001	c0001	t0001	g0027	AFR	GWD	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
HG02622	hp1	a0001	c0001	t0001	g0001	AFR	GWD	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
HG02622	hp2	a0001	c0001	t0001	g0024	AFR	GWD	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
HG02630	hp1	a0001	c0001	t0001	g0052	AFR	GWD	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
HG02630	hp2	a0001	c0001	t0001	g0054	AFR	GWD	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
HG02647	hp1	a0002	c0002	t0001	g0058	AFR	GWD	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
HG02647	hp2	a0001	c0001	t0001	g0055	AFR	GWD	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
HG02683	hp1	a0001	c0001	t0001	g0001	SAS	PJL	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
HG02683	hp2	a0002	c0002	t0001	g0002	SAS	PJL	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
HG02717	hp1	a0002	c0002	t0001	g0008	AFR	GWD	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
HG02717	hp2	a0004	c0004	t0002	g0015	AFR	GWD	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
HG02735	hp1	a0001	c0001	t0001	g0001	SAS	PJL	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
HG02735	hp2	a0005	c0005	t0001	g0005	SAS	PJL	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
HG02738	hp1	a0003	c0003	t0001	g0003	SAS	PJL	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
HG02738	hp2	a0003	c0003	t0001	g0026	SAS	PJL	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
HG02809	hp1	a0002	c0002	t0001	g0057	AFR	GWD	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
HG02809	hp2	a0002	c0002	t0001	g0002	AFR	GWD	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
HG02818	hp1	a0004	c0004	t0002	g0012	AFR	GWD	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
HG02818	hp2	a0002	c0002	t0001	g0021	AFR	GWD	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
HG02886	hp1	a0002	c0002	t0001	g0067	AFR	GWD	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
HG02886	hp2	a0002	c0002	t0001	g0002	AFR	GWD	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
HG02895	hp1	a0002	c0002	t0001	g0029	AFR	GWD	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
HG02895	hp2	a0007	c0007	t0001	g0017	AFR	GWD	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
HG02896	hp1	a0002	c0002	t0001	g0002	AFR	GWD	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
HG02896	hp2	a0002	c0002	t0001	g0002	AFR	GWD	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
HG02897	hp1	a0002	c0002	t0001	g0029	AFR	GWD	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
HG02897	hp2	a0002	c0002	t0001	g0002	AFR	GWD	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
HG02922	hp1	a0002	c0002	t0001	g0002	AFR	ESN	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
HG02922	hp2	a0002	c0002	t0001	g0002	AFR	ESN	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
HG02965	hp1	a0002	c0002	t0001	g0002	AFR	ESN	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
HG02965	hp2	a0001	c0016	t0001	g0060	AFR	ESN	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
HG02970	hp1	a0001	c0001	t0001	g0024	AFR	ESN	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
HG02970	hp2	a0002	c0002	t0001	g0065	AFR	ESN	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
HG02976	hp1	a0001	c0001	t0001	g0075	AFR	ESN	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
HG02976	hp2	a0002	c0002	t0001	g0072	AFR	ESN	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
HG03017	hp1	a0003	c0003	t0001	g0025	SAS	PJL	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
HG03017	hp2	a0001	c0001	t0001	g0010	SAS	PJL	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
HG03098	hp1	a0001	c0001	t0001	g0017	AFR	MSL	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
HG03098	hp2	a0002	c0002	t0001	g0002	AFR	MSL	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
HG03130	hp1	a0001	c0001	t0001	g0076	AFR	ESN	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
HG03130	hp2	a0004	c0004	t0002	g0012	AFR	ESN	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
HG03139	hp1	a0002	c0002	t0001	g0019	AFR	ESN	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
HG03139	hp2	a0002	c0002	t0001	g0020	AFR	ESN	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
HG03209	hp1	a0001	c0001	t0001	g0079	AFR	MSL	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
HG03209	hp2	a0002	c0002	t0001	g0002	AFR	MSL	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
HG03225	hp1	a0001	c0001	t0001	g0027	AFR	MSL	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
HG03225	hp2	a0002	c0002	t0001	g0002	AFR	MSL	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
HG03239	hp1	a0002	c0002	t0001	g0002	SAS	PJL	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
HG03239	hp2	a0001	c0006	t0001	g0001	SAS	PJL	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
HG03453	hp1	a0001	c0001	t0001	g0036	AFR	MSL	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
HG03453	hp2	a0004	c0004	t0002	g0012	AFR	MSL	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
HG03486	hp1	a0010	c0022	t0001	g0002	AFR	MSL	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
HG03486	hp2	a0002	c0002	t0001	g0008	AFR	MSL	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
HG03490	hp1	a0003	c0003	t0001	g0026	SAS	PJL	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
HG03490	hp2	a0002	c0002	t0001	g0002	SAS	PJL	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
HG03516	hp1	a0002	c0002	t0001	g0008	AFR	ESN	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
HG03516	hp2	a0002	c0002	t0001	g0031	AFR	ESN	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
HG03540	hp1	a0002	c0002	t0001	g0070	AFR	GWD	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
HG03540	hp2	a0004	c0004	t0002	g0015	AFR	GWD	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
HG03579	hp1	a0002	c0002	t0001	g0019	AFR	MSL	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
HG03579	hp2	a0002	c0002	t0001	g0021	AFR	MSL	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
HG03654	hp1	a0005	c0005	t0001	g0005	SAS	PJL	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
HG03654	hp2	a0002	c0002	t0001	g0002	SAS	PJL	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
HG03669	hp1	a0001	c0006	t0001	g0001	SAS	PJL	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
HG03669	hp2	a0001	c0001	t0001	g0001	SAS	PJL	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
HG03688	hp1	a0004	c0020	t0002	g0004	SAS	STU	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
HG03688	hp2	a0001	c0001	t0001	g0007	SAS	STU	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
HG03704	hp1	a0003	c0003	t0001	g0014	SAS	PJL	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
HG03704	hp2	a0001	c0001	t0001	g0001	SAS	PJL	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
HG03710	hp1	a0001	c0001	t0001	g0006	SAS	PJL	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
HG03710	hp2	a0003	c0003	t0001	g0025	SAS	PJL	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
HG03831	hp1	a0001	c0001	t0001	g0001	SAS	BEB	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
HG03831	hp2	a0001	c0001	t0001	g0007	SAS	BEB	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
HG03834	hp1	a0003	c0003	t0001	g0051	SAS	BEB	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
HG03834	hp2	a0001	c0001	t0001	g0001	SAS	BEB	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
HG03927	hp1	a0001	c0001	t0001	g0001	SAS	BEB	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
HG03927	hp2	a0001	c0001	t0001	g0010	SAS	BEB	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
HG03942	hp1	a0003	c0003	t0001	g0003	SAS	BEB	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
HG03942	hp2	a0001	c0001	t0001	g0001	SAS	BEB	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
HG04115	hp1	a0005	c0005	t0001	g0005	SAS	STU	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
HG04115	hp2	a0005	c0005	t0001	g0078	SAS	STU	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
HG04184	hp1	a0001	c0001	t0001	g0001	SAS	BEB	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
HG04184	hp2	a0003	c0003	t0001	g0003	SAS	BEB	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
HG04199	hp1	a0001	c0001	t0001	g0049	SAS	STU	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
HG04199	hp2	a0001	c0001	t0001	g0010	SAS	STU	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
HG04204	hp1	a0001	c0001	t0001	g0010	SAS	STU	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
HG04204	hp2	a0002	c0002	t0001	g0002	SAS	STU	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
HG04228	hp1	a0001	c0001	t0001	g0001	SAS	STU	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
HG04228	hp2	a0001	c0001	t0001	g0001	SAS	STU	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
NA18522	hp1	a0001	c0001	t0001	g0011	AFR	YRI	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
NA18522	hp2	a0002	c0002	t0001	g0002	AFR	YRI	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
NA18612	hp1	a0006	c0009	t0001	g0005	EAS	CHB	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
NA18612	hp2	a0004	c0004	t0002	g0004	EAS	CHB	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
NA18906	hp1	a0002	c0002	t0001	g0031	AFR	YRI	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
NA18906	hp2	a0001	c0001	t0001	g0001	AFR	YRI	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
NA18942	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
NA18942	hp2	a0002	c0002	t0001	g0062	EAS	JPT	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
NA18943	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
NA18943	hp2	a0001	c0001	t0001	g0044	EAS	JPT	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
NA18945	hp1	a0001	c0001	t0001	g0023	EAS	JPT	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
NA18945	hp2	a0001	c0001	t0001	g0007	EAS	JPT	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
NA18948	hp1	a0003	c0003	t0001	g0003	EAS	JPT	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
NA18948	hp2	a0001	c0001	t0001	g0001	EAS	JPT	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
NA18951	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
NA18951	hp2	a0004	c0004	t0002	g0004	EAS	JPT	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
NA18952	hp1	a0003	c0003	t0001	g0003	EAS	JPT	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
NA18952	hp2	a0001	c0001	t0001	g0010	EAS	JPT	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
NA18953	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
NA18953	hp2	a0002	c0008	t0001	g0022	EAS	JPT	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
NA18954	hp1	a0001	c0001	t0001	g0011	EAS	JPT	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
NA18954	hp2	a0002	c0002	t0001	g0002	EAS	JPT	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
NA18956	hp1	a0001	c0001	t0001	g0011	EAS	JPT	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
NA18956	hp2	a0002	c0002	t0001	g0002	EAS	JPT	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
NA18957	hp1	a0003	c0003	t0001	g0003	EAS	JPT	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
NA18957	hp2	a0001	c0001	t0001	g0032	EAS	JPT	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
NA18961	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
NA18961	hp2	a0002	c0002	t0001	g0002	EAS	JPT	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
NA18963	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
NA18963	hp2	a0003	c0003	t0001	g0014	EAS	JPT	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
NA18971	hp1	a0002	c0002	t0001	g0002	EAS	JPT	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
NA18971	hp2	a0001	c0001	t0001	g0001	EAS	JPT	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
NA18973	hp1	a0003	c0003	t0001	g0014	EAS	JPT	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
NA18973	hp2	a0004	c0004	t0002	g0061	EAS	JPT	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
NA18977	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
NA18977	hp2	a0001	c0001	t0001	g0006	EAS	JPT	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
NA18980	hp1	a0004	c0004	t0002	g0004	EAS	JPT	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
NA18980	hp2	a0001	c0001	t0001	g0007	EAS	JPT	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
NA18981	hp1	a0003	c0003	t0001	g0003	EAS	JPT	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
NA18981	hp2	a0001	c0001	t0001	g0001	EAS	JPT	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
NA18984	hp1	a0001	c0001	t0001	g0038	EAS	JPT	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
NA18984	hp2	a0013	c0012	t0001	g0001	EAS	JPT	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
NA18986	hp1	a0001	c0001	t0001	g0011	EAS	JPT	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
NA18986	hp2	a0001	c0001	t0001	g0001	EAS	JPT	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
NA18993	hp1	a0003	c0003	t0001	g0003	EAS	JPT	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
NA18993	hp2	a0001	c0001	t0001	g0001	EAS	JPT	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
NA18994	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
NA18994	hp2	a0001	c0001	t0001	g0045	EAS	JPT	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
NA19002	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
NA19002	hp2	a0001	c0001	t0001	g0007	EAS	JPT	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
NA19007	hp1	a0001	c0001	t0001	g0007	EAS	JPT	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
NA19007	hp2	a0002	c0002	t0001	g0002	EAS	JPT	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
NA19009	hp1	a0001	c0001	t0001	g0011	EAS	JPT	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
NA19009	hp2	a0006	c0009	t0001	g0005	EAS	JPT	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
NA19010	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
NA19010	hp2	a0001	c0001	t0001	g0001	EAS	JPT	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
NA19030	hp1	a0002	c0002	t0001	g0002	AFR	LWK	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
NA19030	hp2	a0002	c0002	t0001	g0002	AFR	LWK	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
NA19043	hp1	a0002	c0002	t0001	g0002	AFR	LWK	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
NA19043	hp2	a0018	c0026	t0001	g0033	AFR	LWK	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
NA19056	hp1	a0002	c0002	t0001	g0002	EAS	JPT	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
NA19056	hp2	a0001	c0001	t0001	g0001	EAS	JPT	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
NA19057	hp1	a0002	c0008	t0001	g0022	EAS	JPT	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
NA19057	hp2	a0001	c0001	t0001	g0001	EAS	JPT	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
NA19058	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
NA19058	hp2	a0015	c0017	t0001	g0001	EAS	JPT	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
NA19065	hp1	a0009	c0010	t0001	g0001	EAS	JPT	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
NA19065	hp2	a0001	c0001	t0001	g0039	EAS	JPT	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
NA19068	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
NA19068	hp2	a0002	c0008	t0001	g0022	EAS	JPT	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
NA19082	hp1	a0003	c0003	t0001	g0003	EAS	JPT	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
NA19082	hp2	a0001	c0001	t0001	g0001	EAS	JPT	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
NA19087	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
NA19087	hp2	a0006	c0009	t0001	g0005	EAS	JPT	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
NA19088	hp1	a0001	c0001	t0001	g0040	EAS	JPT	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
NA19088	hp2	a0001	c0001	t0001	g0001	EAS	JPT	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
NA19089	hp1	a0009	c0010	t0001	g0001	EAS	JPT	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
NA19089	hp2	a0001	c0001	t0001	g0001	EAS	JPT	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
NA19240	hp1	a0002	c0002	t0001	g0008	AFR	YRI	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
NA19240	hp2	a0002	c0002	t0001	g0020	AFR	YRI	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
NA20129	hp1	a0001	c0001	t0001	g0080	AFR	ASW	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
NA20129	hp2	a0002	c0002	t0001	g0002	AFR	ASW	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
NA20752	hp1	a0002	c0025	t0001	g0063	EUR	TSI	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
NA20752	hp2	a0008	c0011	t0001	g0028	EUR	TSI	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
NA20805	hp1	a0002	c0002	t0001	g0064	EUR	TSI	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
NA20805	hp2	a0001	c0001	t0001	g0001	EUR	TSI	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
NA20905	hp1	a0002	c0002	t0001	g0071	SAS	GIH	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
NA20905	hp2	a0001	c0001	t0001	g0001	SAS	GIH	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
HG01123	hp1	a0005	c0005	t0001	g0005	AMR	CLM	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
HG01123	hp2	a0003	c0014	t0001	g0013	AMR	CLM	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
HG02109	hp1	a0002	c0002	t0001	g0002	AFR	ACB	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
HG02109	hp2	a0002	c0002	t0001	g0002	AFR	ACB	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
HG02486	hp1	a0002	c0002	t0001	g0073	AFR	ACB	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
HG02486	hp2	a0002	c0002	t0001	g0002	AFR	ACB	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
HG02559	hp1	a0002	c0002	t0001	g0002	AFR	ACB	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
HG02559	hp2	a0002	c0002	t0001	g0002	AFR	ACB	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
HG03471	hp1	a0002	c0002	t0001	g0016	AFR	MSL	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
HG03471	hp2	a0002	c0002	t0001	g0002	AFR	MSL	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
HG06807	hp1	a0002	c0002	t0001	g0019	AFR	USA	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
HG06807	hp2	a0002	c0002	t0001	g0008	AFR	USA	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
NA20300	hp1	a0001	c0001	t0001	g0001	AFR	USA	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
NA20300	hp2	a0004	c0004	t0002	g0015	AFR	USA	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
NA21309	hp1	a0016	c0015	t0001	g0077	AFR	LWK	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
NA21309	hp2	a0002	c0002	t0001	g0002	AFR	LWK	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
homoSapiens_chm13v2	hp1	a0001	c0001	t0001	g0001	REF	REF	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852
homoSapiens_grch38	hp1	a0003	c0003	t0001	g0009	REF	REF	SPATA20_chr17_50542174_50560852	SPATA20	chr17	50542174	50560852

chr:pos	ref	alt	# # of ahapid:amino-acid(protein) level	ahapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	hgvs_p	genename	geneid	featuretype	featureid	transcript_biotype	rank	cdna cdna pos length	cds cds pos length	aa aa pos length	chr	pos
chr17:50548306	A A	G G	1	a0018 a0018	1	NA19043.hp2 NA19043.hp2	missense_variant	MODERATE	c.149A>G c.149A>G	p.Asp50Gly p.Asp50Gly	SPATA20	ENSG00000006282.22	transcript	ENST00000006658.11	protein_coding	3/17	184/2634	149/2409	50/802	chr17	50548306
chr17:50548440	A A	G G	1	a0008 a0008	2	HG00733.hp2 NA20752.hp2 HG00733.hp2 NA20752.hp2	missense_variant	MODERATE	c.283A>G c.283A>G	p.Asn95Asp p.Asn95Asp	SPATA20	ENSG00000006282.22	transcript	ENST00000006658.11	protein_coding	3/17	318/2634	283/2409	95/802	chr17	50548440
chr17:50548567	C C	G G	6	a0002 a0005 a0006 others(3): Show a0002 a0005 a0006 a0010 a0011 a0012	113	HG00099.hp2 HG00140.hp1 HG00280.hp1 others(110): Show HG00099.hp2 HG00140.hp1 HG00280.hp1 HG00642.hp1 HG00642.hp2 HG00738.hp2 HG00741.hp1 HG01069.hp2 HG01071.hp1 HG01074.hp1 HG01074.hp2 HG01099.hp1 HG01106.hp2 HG01123.hp1 HG01168.hp2 HG01169.hp2 HG01175.hp1 HG01243.hp2 HG01255.hp1 HG01261.hp2 HG01515.hp1 HG01517.hp1 HG01884.hp1 HG01884.hp2 HG01891.hp1 HG01934.hp1 HG01952.hp1 HG01981.hp1 HG02055.hp2 HG02074.hp2 HG02080.hp1 HG02109.hp1 HG02109.hp2 HG02145.hp1 HG02258.hp1 HG02258.hp2 HG02280.hp1 HG02280.hp2 HG02451.hp1 HG02451.hp2 HG02486.hp1 HG02486.hp2 HG02559.hp1 HG02559.hp2 HG02602.hp1 HG02615.hp1 HG02647.hp1 HG02683.hp2 HG02717.hp1 HG02735.hp2 HG02809.hp1 HG02809.hp2 HG02818.hp2 HG02886.hp1 HG02886.hp2 HG02895.hp1 HG02896.hp1 HG02896.hp2 HG02897.hp1 HG02897.hp2 HG02922.hp1 HG02922.hp2 HG02965.hp1 HG02970.hp2 HG02976.hp2 HG03098.hp2 HG03139.hp1 HG03139.hp2 HG03209.hp2 HG03225.hp2 HG03239.hp1 HG03471.hp1 HG03471.hp2 HG03486.hp1 HG03486.hp2 HG03490.hp2 HG03516.hp1 HG03516.hp2 HG03540.hp1 HG03579.hp1 HG03579.hp2 HG03654.hp1 HG03654.hp2 HG04115.hp1 HG04115.hp2 HG04204.hp2 HG06807.hp1 HG06807.hp2 NA18522.hp2 NA18612.hp1 NA18906.hp1 NA18942.hp2 NA18953.hp2 NA18954.hp2 NA18956.hp2 NA18961.hp2 NA18971.hp1 NA19007.hp2 NA19009.hp2 NA19030.hp1 NA19030.hp2 NA19043.hp1 NA19056.hp1 NA19057.hp1 NA19068.hp2 NA19087.hp2 NA19240.hp1 NA19240.hp2 NA20129.hp2 NA20752.hp1 NA20805.hp1 NA20905.hp1 NA21309.hp2	missense_variant	MODERATE	c.310C>G c.310C>G	p.Gln104Glu p.Gln104Glu	SPATA20	ENSG00000006282.22	transcript	ENST00000006658.11	protein_coding	4/17	345/2634	310/2409	104/802	chr17	50548567
chr17:50549326	G G	A A	1	a0013 a0013	1	NA18984.hp2 NA18984.hp2	missense_variant	MODERATE	c.701G>A c.701G>A	p.Arg234His p.Arg234His	SPATA20	ENSG00000006282.22	transcript	ENST00000006658.11	protein_coding	7/17	736/2634	701/2409	234/802	chr17	50549326
chr17:50550099	G G	A A	1	a0007 a0007	3	HG01167.hp2 HG01169.hp1 HG02895.hp2 HG01167.hp2 HG01169.hp1 HG02895.hp2	missense_variant	MODERATE	c.977G>A c.977G>A	p.Arg326Gln p.Arg326Gln	SPATA20	ENSG00000006282.22	transcript	ENST00000006658.11	protein_coding	8/17	1012/2634	977/2409	326/802	chr17	50550099
chr17:50550233	G G	A A	1	a0010 a0010	1	HG03486.hp1 HG03486.hp1	missense_variant	MODERATE	c.1019G>A c.1019G>A	p.Arg340His p.Arg340His	SPATA20	ENSG00000006282.22	transcript	ENST00000006658.11	protein_coding	9/17	1054/2634	1019/2409	340/802	chr17	50550233
chr17:50550799	A A	G G	2	a0004 a0017 a0004 a0017	23	HG01070.hp1 HG01192.hp1 HG01243.hp1 others(20): Show HG01070.hp1 HG01192.hp1 HG01243.hp1 HG01261.hp1 HG01346.hp1 HG01516.hp1 HG01891.hp2 HG02071.hp2 HG02145.hp2 HG02293.hp2 HG02572.hp1 HG02572.hp2 HG02717.hp2 HG02818.hp1 HG03130.hp2 HG03453.hp2 HG03540.hp2 HG03688.hp1 NA18612.hp2 NA18951.hp2 NA18973.hp2 NA18980.hp1 NA20300.hp2	missense_variant	MODERATE	c.1265A>G c.1265A>G	p.Lys422Arg p.Lys422Arg	SPATA20	ENSG00000006282.22	transcript	ENST00000006658.11	protein_coding	11/17	1300/2634	1265/2409	422/802	chr17	50550799
chr17:50551037	G G	C C	1	a0014 a0014	1	HG02027.hp2 HG02027.hp2	missense_variant	MODERATE	c.1423G>C c.1423G>C	p.Val475Leu p.Val475Leu	SPATA20	ENSG00000006282.22	transcript	ENST00000006658.11	protein_coding	12/17	1458/2634	1423/2409	475/802	chr17	50551037
chr17:50551040	C C	T T	1	a0012 a0012	1	HG01952.hp1 HG01952.hp1	missense_variant	MODERATE	c.1426C>T c.1426C>T	p.Arg476Trp p.Arg476Trp	SPATA20	ENSG00000006282.22	transcript	ENST00000006658.11	protein_coding	12/17	1461/2634	1426/2409	476/802	chr17	50551040
chr17:50551091	G G	A A	1	a0009 a0009	2	NA19065.hp1 NA19089.hp1 NA19065.hp1 NA19089.hp1	missense_variant	MODERATE	c.1477G>A c.1477G>A	p.Val493Met p.Val493Met	SPATA20	ENSG00000006282.22	transcript	ENST00000006658.11	protein_coding	12/17	1512/2634	1477/2409	493/802	chr17	50551091
chr17:50551109	T T	A A	4	a0002 a0004 a0010 others(1): Show a0002 a0004 a0010 a0011	121	HG00099.hp2 HG00642.hp1 HG00642.hp2 others(118): Show HG00099.hp2 HG00642.hp1 HG00642.hp2 HG00738.hp2 HG00741.hp1 HG01069.hp2 HG01070.hp1 HG01071.hp1 HG01074.hp2 HG01099.hp1 HG01106.hp2 HG01168.hp2 HG01169.hp2 HG01175.hp1 HG01192.hp1 HG01243.hp1 HG01243.hp2 HG01255.hp1 HG01261.hp1 HG01346.hp1 HG01515.hp1 HG01516.hp1 HG01517.hp1 HG01884.hp1 HG01884.hp2 HG01891.hp1 HG01891.hp2 HG01934.hp1 HG01981.hp1 HG02055.hp2 HG02071.hp2 HG02074.hp2 HG02080.hp1 HG02109.hp1 HG02109.hp2 HG02145.hp1 HG02145.hp2 HG02258.hp1 HG02258.hp2 HG02280.hp1 HG02280.hp2 HG02293.hp2 HG02451.hp1 HG02451.hp2 HG02486.hp1 HG02486.hp2 HG02559.hp1 HG02559.hp2 HG02572.hp2 HG02615.hp1 HG02647.hp1 HG02683.hp2 HG02717.hp1 HG02717.hp2 HG02809.hp1 HG02809.hp2 HG02818.hp1 HG02818.hp2 HG02886.hp1 HG02886.hp2 HG02895.hp1 HG02896.hp1 HG02896.hp2 HG02897.hp1 HG02897.hp2 HG02922.hp1 HG02922.hp2 HG02965.hp1 HG02970.hp2 HG02976.hp2 HG03098.hp2 HG03130.hp2 HG03139.hp1 HG03139.hp2 HG03209.hp2 HG03225.hp2 HG03239.hp1 HG03453.hp2 HG03471.hp1 HG03471.hp2 HG03486.hp1 HG03486.hp2 HG03490.hp2 HG03516.hp1 HG03516.hp2 HG03540.hp1 HG03540.hp2 HG03579.hp1 HG03579.hp2 HG03654.hp2 HG03688.hp1 HG04204.hp2 HG06807.hp1 HG06807.hp2 NA18522.hp2 NA18612.hp2 NA18906.hp1 NA18942.hp2 NA18951.hp2 NA18953.hp2 NA18954.hp2 NA18956.hp2 NA18961.hp2 NA18971.hp1 NA18973.hp2 NA18980.hp1 NA19007.hp2 NA19030.hp1 NA19030.hp2 NA19043.hp1 NA19056.hp1 NA19057.hp1 NA19068.hp2 NA19240.hp1 NA19240.hp2 NA20129.hp2 NA20300.hp2 NA20752.hp1 NA20805.hp1 NA20905.hp1 NA21309.hp2	missense_variant	MODERATE	c.1495T>A c.1495T>A	p.Ser499Thr p.Ser499Thr	SPATA20	ENSG00000006282.22	transcript	ENST00000006658.11	protein_coding	12/17	1530/2634	1495/2409	499/802	chr17	50551109
chr17:50552009	G G	A A	1	a0006 a0006	3	NA18612.hp1 NA19009.hp2 NA19087.hp2 NA18612.hp1 NA19009.hp2 NA19087.hp2	missense_variant	MODERATE	c.1786G>A c.1786G>A	p.Val596Met p.Val596Met	SPATA20	ENSG00000006282.22	transcript	ENST00000006658.11	protein_coding	14/17	1821/2634	1786/2409	596/802	chr17	50552009
chr17:50552034	A A	G G	1	a0015 a0015	1	NA19058.hp2 NA19058.hp2	missense_variant	MODERATE	c.1811A>G c.1811A>G	p.Tyr604Cys p.Tyr604Cys	SPATA20	ENSG00000006282.22	transcript	ENST00000006658.11	protein_coding	14/17	1846/2634	1811/2409	604/802	chr17	50552034
chr17:50552097	A A	G G	16	a0001 a0002 a0004 others(13): Show a0001 a0002 a0004 a0005 a0006 a0007 a0009 a0010 a0011 a0012 a0013 a0014 a0015 a0016 a0017 a0018	295	HG00099.hp1 HG00099.hp2 HG00140.hp1 others(292): Show HG00099.hp1 HG00099.hp2 HG00140.hp1 HG00140.hp2 HG00280.hp1 HG00280.hp2 HG00408.hp1 HG00408.hp2 HG00597.hp1 HG00597.hp2 HG00621.hp1 HG00621.hp2 HG00639.hp1 HG00639.hp2 HG00642.hp1 HG00642.hp2 HG00673.hp1 HG00673.hp2 HG00733.hp1 HG00738.hp1 HG00738.hp2 HG00741.hp1 HG01069.hp1 HG01069.hp2 HG01070.hp1 HG01070.hp2 HG01071.hp1 HG01071.hp2 HG01074.hp1 HG01074.hp2 HG01081.hp1 HG01081.hp2 HG01099.hp1 HG01099.hp2 HG01106.hp1 HG01106.hp2 HG01109.hp1 HG01109.hp2 HG01123.hp1 HG01167.hp1 HG01167.hp2 HG01168.hp1 HG01168.hp2 HG01169.hp1 HG01169.hp2 HG01175.hp1 HG01192.hp1 HG01192.hp2 HG01243.hp1 HG01243.hp2 HG01255.hp1 HG01261.hp1 HG01261.hp2 HG01346.hp1 HG01361.hp1 HG01361.hp2 HG01433.hp1 HG01433.hp2 HG01515.hp1 HG01516.hp1 HG01516.hp2 HG01517.hp1 HG01517.hp2 HG01884.hp1 HG01884.hp2 HG01891.hp1 HG01891.hp2 HG01934.hp1 HG01934.hp2 HG01952.hp1 HG01952.hp2 HG01975.hp2 HG01978.hp1 HG01978.hp2 HG01981.hp1 HG01981.hp2 HG01993.hp2 HG02015.hp1 HG02015.hp2 HG02027.hp1 HG02027.hp2 HG02040.hp1 HG02040.hp2 HG02055.hp1 HG02055.hp2 HG02056.hp1 HG02056.hp2 HG02071.hp1 HG02071.hp2 HG02074.hp1 HG02074.hp2 HG02080.hp1 HG02080.hp2 HG02083.hp1 HG02083.hp2 HG02109.hp1 HG02109.hp2 HG02129.hp1 HG02129.hp2 HG02132.hp1 HG02132.hp2 HG02145.hp1 HG02145.hp2 HG02148.hp1 HG02148.hp2 HG02165.hp1 HG02165.hp2 HG02257.hp1 HG02257.hp2 HG02258.hp1 HG02258.hp2 HG02273.hp1 HG02280.hp1 HG02280.hp2 HG02293.hp1 HG02293.hp2 HG02451.hp1 HG02451.hp2 HG02486.hp1 HG02486.hp2 HG02559.hp1 HG02559.hp2 HG02572.hp1 HG02572.hp2 HG02602.hp1 HG02602.hp2 HG02615.hp1 HG02615.hp2 HG02622.hp1 HG02622.hp2 HG02630.hp1 HG02630.hp2 HG02647.hp1 HG02647.hp2 HG02683.hp1 HG02683.hp2 HG02717.hp1 HG02717.hp2 HG02735.hp1 HG02735.hp2 HG02809.hp1 HG02809.hp2 HG02818.hp1 HG02818.hp2 HG02886.hp1 HG02886.hp2 HG02895.hp1 HG02895.hp2 HG02896.hp1 HG02896.hp2 HG02897.hp1 HG02897.hp2 HG02922.hp1 HG02922.hp2 HG02965.hp1 HG02965.hp2 HG02970.hp1 HG02970.hp2 HG02976.hp1 HG02976.hp2 HG03017.hp2 HG03098.hp1 HG03098.hp2 HG03130.hp1 HG03130.hp2 HG03139.hp1 HG03139.hp2 HG03209.hp1 HG03209.hp2 HG03225.hp1 HG03225.hp2 HG03239.hp1 HG03239.hp2 HG03453.hp1 HG03453.hp2 HG03471.hp1 HG03471.hp2 HG03486.hp1 HG03486.hp2 HG03490.hp2 HG03516.hp1 HG03516.hp2 HG03540.hp1 HG03540.hp2 HG03579.hp1 HG03579.hp2 HG03654.hp1 HG03654.hp2 HG03669.hp1 HG03669.hp2 HG03688.hp1 HG03688.hp2 HG03704.hp2 HG03710.hp1 HG03831.hp1 HG03831.hp2 HG03834.hp2 HG03927.hp1 HG03927.hp2 HG03942.hp2 HG04115.hp1 HG04115.hp2 HG04184.hp1 HG04199.hp1 HG04199.hp2 HG04204.hp1 HG04204.hp2 HG04228.hp1 HG04228.hp2 HG06807.hp1 HG06807.hp2 NA18522.hp1 NA18522.hp2 NA18612.hp1 NA18612.hp2 NA18906.hp1 NA18906.hp2 NA18942.hp1 NA18942.hp2 NA18943.hp1 NA18943.hp2 NA18945.hp1 NA18945.hp2 NA18948.hp2 NA18951.hp1 NA18951.hp2 NA18952.hp2 NA18953.hp1 NA18953.hp2 NA18954.hp1 NA18954.hp2 NA18956.hp1 NA18956.hp2 NA18957.hp2 NA18961.hp1 NA18961.hp2 NA18963.hp1 NA18971.hp1 NA18971.hp2 NA18973.hp2 NA18977.hp1 NA18977.hp2 NA18980.hp1 NA18980.hp2 NA18981.hp2 NA18984.hp1 NA18984.hp2 NA18986.hp1 NA18986.hp2 NA18993.hp2 NA18994.hp1 NA18994.hp2 NA19002.hp1 NA19002.hp2 NA19007.hp1 NA19007.hp2 NA19009.hp1 NA19009.hp2 NA19010.hp1 NA19010.hp2 NA19030.hp1 NA19030.hp2 NA19043.hp1 NA19043.hp2 NA19056.hp1 NA19056.hp2 NA19057.hp1 NA19057.hp2 NA19058.hp1 NA19058.hp2 NA19065.hp1 NA19065.hp2 NA19068.hp1 NA19068.hp2 NA19082.hp2 NA19087.hp1 NA19087.hp2 NA19088.hp1 NA19088.hp2 NA19089.hp1 NA19089.hp2 NA19240.hp1 NA19240.hp2 NA20129.hp1 NA20129.hp2 NA20300.hp1 NA20300.hp2 NA20752.hp1 NA20805.hp1 NA20805.hp2 NA20905.hp1 NA20905.hp2 NA21309.hp1 NA21309.hp2 homoSapiens_chm13v2.hp1	missense_variant	MODERATE	c.1874A>G c.1874A>G	p.Lys625Arg p.Lys625Arg	SPATA20	ENSG00000006282.22	transcript	ENST00000006658.11	protein_coding	14/17	1909/2634	1874/2409	625/802	chr17	50552097
chr17:50555523	G G	C C	1	a0011 a0011	1	HG02451.hp2 HG02451.hp2	missense_variant	MODERATE	c.2270G>C c.2270G>C	p.Ser757Thr p.Ser757Thr	SPATA20	ENSG00000006282.22	transcript	ENST00000006658.11	protein_coding	17/17	2305/2634	2270/2409	757/802	chr17	50555523
chr17:50555534	C C	T T	1	a0016 a0016	1	NA21309.hp1 NA21309.hp1	missense_variant	MODERATE	c.2281C>T c.2281C>T	p.Arg761Cys p.Arg761Cys	SPATA20	ENSG00000006282.22	transcript	ENST00000006658.11	protein_coding	17/17	2316/2634	2281/2409	761/802	chr17	50555534

chr:pos	ref	alt	# # of chapid	chapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	hgvs_p	genename	geneid	featuretype	featureid	transcript_biotype	rank	cdna cdna pos length	cds cds pos length	aa aa pos length	chr	pos
chr17:50547277	G G	A A	1	a0001c0006 a0001c0006	4	HG01192.hp2 HG01361.hp1 HG03239.hp2 others(1): Show HG01192.hp2 HG01361.hp1 HG03239.hp2 HG03669.hp1	synonymous_variant	LOW	c.69G>A c.69G>A	p.Ala23Ala p.Ala23Ala	SPATA20	ENSG00000006282.22	transcript	ENST00000006658.11	protein_coding	1/17	104/2634	69/2409	23/802	chr17	50547277
chr17:50548881	C C	T T	1	a0001c0021 a0001c0021	1	HG02148.hp2 HG02148.hp2	synonymous_variant	LOW	c.433C>T c.433C>T	p.Leu145Leu p.Leu145Leu	SPATA20	ENSG00000006282.22	transcript	ENST00000006658.11	protein_coding	5/17	468/2634	433/2409	145/802	chr17	50548881
chr17:50549366	G G	A A	1	a0002c0008 a0002c0008	3	NA18953.hp2 NA19057.hp1 NA19068.hp2 NA18953.hp2 NA19057.hp1 NA19068.hp2	synonymous_variant	LOW	c.741G>A c.741G>A	p.Val247Val p.Val247Val	SPATA20	ENSG00000006282.22	transcript	ENST00000006658.11	protein_coding	7/17	776/2634	741/2409	247/802	chr17	50549366
chr17:50549393	C C	T T	1	a0004c0020 a0004c0020	1	HG03688.hp1 HG03688.hp1	synonymous_variant	LOW	c.768C>T c.768C>T	p.Ala256Ala p.Ala256Ala	SPATA20	ENSG00000006282.22	transcript	ENST00000006658.11	protein_coding	7/17	803/2634	768/2409	256/802	chr17	50549393
chr17:50550731	A A	G G	5	a0002c0002 a0002c0008 a0002c0025 others(2): Show a0002c0002 a0002c0008 a0002c0025 a0010c0022 a0011c0024	99	HG00099.hp2 HG00642.hp1 HG00642.hp2 others(96): Show HG00099.hp2 HG00642.hp1 HG00642.hp2 HG00738.hp2 HG00741.hp1 HG01069.hp2 HG01071.hp1 HG01074.hp2 HG01099.hp1 HG01106.hp2 HG01168.hp2 HG01169.hp2 HG01175.hp1 HG01243.hp2 HG01255.hp1 HG01515.hp1 HG01517.hp1 HG01884.hp1 HG01884.hp2 HG01891.hp1 HG01934.hp1 HG01981.hp1 HG02055.hp2 HG02074.hp2 HG02080.hp1 HG02109.hp1 HG02109.hp2 HG02145.hp1 HG02258.hp1 HG02258.hp2 HG02280.hp1 HG02280.hp2 HG02451.hp1 HG02451.hp2 HG02486.hp1 HG02486.hp2 HG02559.hp1 HG02559.hp2 HG02615.hp1 HG02647.hp1 HG02683.hp2 HG02717.hp1 HG02809.hp1 HG02809.hp2 HG02818.hp2 HG02886.hp1 HG02886.hp2 HG02895.hp1 HG02896.hp1 HG02896.hp2 HG02897.hp1 HG02897.hp2 HG02922.hp1 HG02922.hp2 HG02965.hp1 HG02970.hp2 HG02976.hp2 HG03098.hp2 HG03139.hp1 HG03139.hp2 HG03209.hp2 HG03225.hp2 HG03239.hp1 HG03471.hp1 HG03471.hp2 HG03486.hp1 HG03486.hp2 HG03490.hp2 HG03516.hp1 HG03516.hp2 HG03540.hp1 HG03579.hp1 HG03579.hp2 HG03654.hp2 HG04204.hp2 HG06807.hp1 HG06807.hp2 NA18522.hp2 NA18906.hp1 NA18942.hp2 NA18953.hp2 NA18954.hp2 NA18956.hp2 NA18961.hp2 NA18971.hp1 NA19007.hp2 NA19030.hp1 NA19030.hp2 NA19043.hp1 NA19056.hp1 NA19057.hp1 NA19068.hp2 NA19240.hp1 NA19240.hp2 NA20129.hp2 NA20752.hp1 NA20805.hp1 NA20905.hp1 NA21309.hp2	synonymous_variant	LOW	c.1197A>G c.1197A>G	p.Glu399Glu p.Glu399Glu	SPATA20	ENSG00000006282.22	transcript	ENST00000006658.11	protein_coding	11/17	1232/2634	1197/2409	399/802	chr17	50550731
chr17:50551036	C C	T T	1	a0002c0025 a0002c0025	1	NA20752.hp1 NA20752.hp1	synonymous_variant	LOW	c.1422C>T c.1422C>T	p.Thr474Thr p.Thr474Thr	SPATA20	ENSG00000006282.22	transcript	ENST00000006658.11	protein_coding	12/17	1457/2634	1422/2409	474/802	chr17	50551036
chr17:50552014	G G	T T	1	a0001c0018 a0001c0018	1	HG01168.hp1 HG01168.hp1	synonymous_variant	LOW	c.1791G>T c.1791G>T	p.Val597Val p.Val597Val	SPATA20	ENSG00000006282.22	transcript	ENST00000006658.11	protein_coding	14/17	1826/2634	1791/2409	597/802	chr17	50552014
chr17:50554273	C C	T T	1	a0003c0014 a0003c0014	1	HG01123.hp2 HG01123.hp2	synonymous_variant	LOW	c.1980C>T c.1980C>T	p.Ser660Ser p.Ser660Ser	SPATA20	ENSG00000006282.22	transcript	ENST00000006658.11	protein_coding	15/17	2015/2634	1980/2409	660/802	chr17	50554273
chr17:50554321	G G	C C	1	a0017c0019 a0017c0019	1	HG02572.hp1 HG02572.hp1	synonymous_variant	LOW	c.2028G>C c.2028G>C	p.Thr676Thr p.Thr676Thr	SPATA20	ENSG00000006282.22	transcript	ENST00000006658.11	protein_coding	15/17	2063/2634	2028/2409	676/802	chr17	50554321
chr17:50554372	C C	T T	1	a0001c0016 a0001c0016	1	HG02965.hp2 HG02965.hp2	synonymous_variant	LOW	c.2079C>T c.2079C>T	p.Ser693Ser p.Ser693Ser	SPATA20	ENSG00000006282.22	transcript	ENST00000006658.11	protein_coding	15/17	2114/2634	2079/2409	693/802	chr17	50554372

chr:pos	ref	alt	# # of thapid:transcript level	thapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	hgvs_p	genename	geneid	featuretype	featureid	transcript_biotype	rank	cdna cdna pos length	cds cds pos length	aa aa pos length	distance	status	chr	pos
chr17:50555676	C C	G G	1	a0001c0001t0003 a0001c0001t0003	1	HG02602.hp2 HG02602.hp2	3_prime_UTR_variant	MODIFIER	c.14C>G c.14C>G		SPATA20	ENSG00000006282.22	transcript	ENST00000006658.11	protein_coding	17/17				14		chr17	50555676
chr17:50555682	G G	A A	2	a0004c0004t0002 a0004c0020t0002 a0004c0004t0002 a0004c0020t0002	22	HG01070.hp1 HG01192.hp1 HG01243.hp1 others(19): Show HG01070.hp1 HG01192.hp1 HG01243.hp1 HG01261.hp1 HG01346.hp1 HG01516.hp1 HG01891.hp2 HG02071.hp2 HG02145.hp2 HG02293.hp2 HG02572.hp2 HG02717.hp2 HG02818.hp1 HG03130.hp2 HG03453.hp2 HG03540.hp2 HG03688.hp1 NA18612.hp2 NA18951.hp2 NA18973.hp2 NA18980.hp1 NA20300.hp2	3_prime_UTR_variant	MODIFIER	c.20G>A c.20G>A		SPATA20	ENSG00000006282.22	transcript	ENST00000006658.11	protein_coding	17/17				20		chr17	50555682

chr:pos	ref	alt	# # of ghapid:genebody level	ghapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	genename	geneid	featuretype	featureid	genebody_biotype	rank	status	chr	pos
chr17:50547475	C C	T T	2	a0001c0001t0001g0079 a0001c0001t0001g0080 a0001c0001t0001g0079 a0001c0001t0001g0080	2	HG03209.hp1 NA20129.hp1 HG03209.hp1 NA20129.hp1	intron_variant	MODIFIER	c.77+190C>T c.77+190C>T	SPATA20	ENSG00000006282.22	transcript	ENST00000006658.11	protein_coding	1/16		chr17	50547475
chr17:50547862	C C	T T	5	a0005c0005t0001g0005 a0005c0005t0001g0018 a0005c0005t0001g0078 others(2): Show a0005c0005t0001g0005 a0005c0005t0001g0018 a0005c0005t0001g0078 a0006c0009t0001g0005 a0012c0023t0001g0018	14	HG00140.hp1 HG00280.hp1 HG01074.hp1 others(11): Show HG00140.hp1 HG00280.hp1 HG01074.hp1 HG01123.hp1 HG01261.hp2 HG01952.hp1 HG02602.hp1 HG02735.hp2 HG03654.hp1 HG04115.hp1 HG04115.hp2 NA18612.hp1 NA19009.hp2 NA19087.hp2	intron_variant	MODIFIER	c.125+95C>T c.125+95C>T	SPATA20	ENSG00000006282.22	transcript	ENST00000006658.11	protein_coding	2/16		chr17	50547862
chr17:50547946	GGGGGAGG others(5): Show GGGGGAGGGGCCT	G G	5	a0005c0005t0001g0005 a0005c0005t0001g0018 a0005c0005t0001g0078 others(2): Show a0005c0005t0001g0005 a0005c0005t0001g0018 a0005c0005t0001g0078 a0006c0009t0001g0005 a0012c0023t0001g0018	14	HG00140.hp1 HG00280.hp1 HG01074.hp1 others(11): Show HG00140.hp1 HG00280.hp1 HG01074.hp1 HG01123.hp1 HG01261.hp2 HG01952.hp1 HG02602.hp1 HG02735.hp2 HG03654.hp1 HG04115.hp1 HG04115.hp2 NA18612.hp1 NA19009.hp2 NA19087.hp2	intron_variant	MODIFIER	c.125+189_125+200del others(12): Show c.125+189_125+200delCCTGGGGAGGGG	SPATA20	ENSG00000006282.22	transcript	ENST00000006658.11	protein_coding	2/16	INFO_REALIGN_3_PRIME	chr17	50547946
chr17:50548114	A A	G G	1	a0016c0015t0001g0077 a0016c0015t0001g0077	1	NA21309.hp1 NA21309.hp1	intron_variant	MODIFIER	c.126-169A>G c.126-169A>G	SPATA20	ENSG00000006282.22	transcript	ENST00000006658.11	protein_coding	2/16		chr17	50548114
chr17:50548182	G G	A A	32	a0001c0001t0001g0001 a0001c0001t0001g0006 a0001c0001t0001g0007 others(29): Show a0001c0001t0001g0001 a0001c0001t0001g0006 a0001c0001t0001g0007 a0001c0001t0001g0010 a0001c0001t0001g0011 a0001c0001t0001g0023 a0001c0001t0001g0024 a0001c0001t0001g0032 a0001c0001t0001g0034 a0001c0001t0001g0036 a0001c0001t0001g0037 a0001c0001t0001g0038 a0001c0001t0001g0039 a0001c0001t0001g0040 a0001c0001t0001g0041 a0001c0001t0001g0043 a0001c0001t0001g0044 a0001c0001t0001g0045 a0001c0001t0001g0047 a0001c0001t0003g0007 a0001c0006t0001g0001 a0001c0006t0001g0035 a0001c0006t0001g0046 a0001c0018t0001g0042 a0001c0021t0001g0001 a0004c0004t0002g0012 a0009c0010t0001g0001 a0013c0012t0001g0001 a0014c0013t0001g0006 a0015c0017t0001g0001 a0016c0015t0001g0077 a0018c0026t0001g0033	149	HG00099.hp1 HG00140.hp2 HG00280.hp2 others(146): Show HG00099.hp1 HG00140.hp2 HG00280.hp2 HG00408.hp1 HG00408.hp2 HG00597.hp1 HG00597.hp2 HG00621.hp1 HG00621.hp2 HG00639.hp1 HG00639.hp2 HG00673.hp1 HG00673.hp2 HG00733.hp1 HG00738.hp1 HG01069.hp1 HG01070.hp2 HG01071.hp2 HG01081.hp1 HG01081.hp2 HG01099.hp2 HG01106.hp1 HG01109.hp1 HG01109.hp2 HG01167.hp1 HG01168.hp1 HG01192.hp2 HG01243.hp1 HG01361.hp1 HG01361.hp2 HG01433.hp1 HG01433.hp2 HG01516.hp2 HG01517.hp2 HG01934.hp2 HG01952.hp2 HG01975.hp2 HG01978.hp1 HG01978.hp2 HG01981.hp2 HG01993.hp2 HG02015.hp1 HG02015.hp2 HG02027.hp1 HG02027.hp2 HG02040.hp1 HG02040.hp2 HG02055.hp1 HG02056.hp1 HG02056.hp2 HG02071.hp1 HG02074.hp1 HG02080.hp2 HG02083.hp1 HG02083.hp2 HG02129.hp1 HG02129.hp2 HG02132.hp1 HG02132.hp2 HG02145.hp2 HG02148.hp1 HG02148.hp2 HG02165.hp1 HG02165.hp2 HG02257.hp1 HG02257.hp2 HG02273.hp1 HG02293.hp1 HG02602.hp2 HG02622.hp1 HG02622.hp2 HG02683.hp1 HG02735.hp1 HG02818.hp1 HG02970.hp1 HG03017.hp2 HG03130.hp2 HG03239.hp2 HG03453.hp1 HG03453.hp2 HG03669.hp1 HG03669.hp2 HG03688.hp2 HG03704.hp2 HG03710.hp1 HG03831.hp1 HG03831.hp2 HG03834.hp2 HG03927.hp1 HG03927.hp2 HG03942.hp2 HG04184.hp1 HG04199.hp2 HG04204.hp1 HG04228.hp1 HG04228.hp2 NA18522.hp1 NA18906.hp2 NA18942.hp1 NA18943.hp1 NA18943.hp2 NA18945.hp1 NA18945.hp2 NA18948.hp2 NA18951.hp1 NA18952.hp2 NA18953.hp1 NA18954.hp1 NA18956.hp1 NA18957.hp2 NA18961.hp1 NA18963.hp1 NA18971.hp2 NA18977.hp1 NA18977.hp2 NA18980.hp2 NA18981.hp2 NA18984.hp1 NA18984.hp2 NA18986.hp1 NA18986.hp2 NA18993.hp2 NA18994.hp1 NA18994.hp2 NA19002.hp1 NA19002.hp2 NA19007.hp1 NA19009.hp1 NA19010.hp1 NA19010.hp2 NA19043.hp2 NA19056.hp2 NA19057.hp2 NA19058.hp1 NA19058.hp2 NA19065.hp1 NA19065.hp2 NA19068.hp1 NA19082.hp2 NA19087.hp1 NA19088.hp1 NA19088.hp2 NA19089.hp1 NA19089.hp2 NA20300.hp1 NA20805.hp2 NA20905.hp2 NA21309.hp1 homoSapiens_chm13v2.hp1	intron_variant	MODIFIER	c.126-101G>A c.126-101G>A	SPATA20	ENSG00000006282.22	transcript	ENST00000006658.11	protein_coding	2/16		chr17	50548182
chr17:50548282	G G	C C	1	a0002c0002t0001g0019 a0002c0002t0001g0019	3	HG03139.hp1 HG03579.hp1 HG06807.hp1 HG03139.hp1 HG03579.hp1 HG06807.hp1	splice_acceptor_variant&intron_variant	HIGH	c.126-1G>C c.126-1G>C	SPATA20	ENSG00000006282.22	transcript	ENST00000006658.11	protein_coding	2/16		chr17	50548282
chr17:50548467	C C	T T	44	a0001c0001t0001g0017 a0001c0001t0001g0075 a0001c0001t0001g0076 others(41): Show a0001c0001t0001g0017 a0001c0001t0001g0075 a0001c0001t0001g0076 a0001c0001t0001g0079 a0001c0001t0001g0080 a0001c0016t0001g0060 a0002c0002t0001g0002 a0002c0002t0001g0008 a0002c0002t0001g0016 a0002c0002t0001g0019 a0002c0002t0001g0020 a0002c0002t0001g0021 a0002c0002t0001g0029 a0002c0002t0001g0030 a0002c0002t0001g0031 a0002c0002t0001g0057 a0002c0002t0001g0058 a0002c0002t0001g0062 a0002c0002t0001g0064 a0002c0002t0001g0065 a0002c0002t0001g0066 a0002c0002t0001g0067 a0002c0002t0001g0069 a0002c0002t0001g0070 a0002c0002t0001g0071 a0002c0002t0001g0072 a0002c0002t0001g0073 a0002c0002t0001g0074 a0002c0008t0001g0022 a0002c0025t0001g0063 a0004c0004t0002g0004 a0004c0004t0002g0012 a0004c0004t0002g0015 a0004c0004t0002g0059 a0004c0004t0002g0061 a0004c0020t0002g0004 a0005c0005t0001g0005 a0005c0005t0001g0018 a0005c0005t0001g0078 a0006c0009t0001g0005 a0007c0007t0001g0017 a0010c0022t0001g0002 a0011c0024t0001g0068 a0012c0023t0001g0018	143	HG00099.hp2 HG00140.hp1 HG00280.hp1 others(140): Show HG00099.hp2 HG00140.hp1 HG00280.hp1 HG00642.hp1 HG00642.hp2 HG00738.hp2 HG00741.hp1 HG01069.hp2 HG01070.hp1 HG01071.hp1 HG01074.hp1 HG01074.hp2 HG01099.hp1 HG01106.hp2 HG01123.hp1 HG01167.hp2 HG01168.hp2 HG01169.hp1 HG01169.hp2 HG01175.hp1 HG01192.hp1 HG01243.hp1 HG01243.hp2 HG01255.hp1 HG01261.hp1 HG01261.hp2 HG01346.hp1 HG01515.hp1 HG01516.hp1 HG01517.hp1 HG01884.hp1 HG01884.hp2 HG01891.hp1 HG01891.hp2 HG01934.hp1 HG01952.hp1 HG01981.hp1 HG02055.hp2 HG02071.hp2 HG02074.hp2 HG02109.hp1 HG02109.hp2 HG02145.hp1 HG02145.hp2 HG02258.hp1 HG02258.hp2 HG02280.hp1 HG02280.hp2 HG02293.hp2 HG02451.hp1 HG02451.hp2 HG02486.hp1 HG02486.hp2 HG02559.hp1 HG02559.hp2 HG02572.hp2 HG02602.hp1 HG02615.hp1 HG02647.hp1 HG02683.hp2 HG02717.hp1 HG02717.hp2 HG02735.hp2 HG02809.hp1 HG02809.hp2 HG02818.hp1 HG02818.hp2 HG02886.hp1 HG02886.hp2 HG02895.hp1 HG02895.hp2 HG02896.hp1 HG02896.hp2 HG02897.hp1 HG02897.hp2 HG02922.hp1 HG02922.hp2 HG02965.hp1 HG02965.hp2 HG02970.hp2 HG02976.hp1 HG02976.hp2 HG03098.hp1 HG03098.hp2 HG03130.hp1 HG03130.hp2 HG03139.hp1 HG03139.hp2 HG03209.hp1 HG03209.hp2 HG03225.hp2 HG03239.hp1 HG03453.hp2 HG03471.hp1 HG03471.hp2 HG03486.hp1 HG03486.hp2 HG03490.hp2 HG03516.hp1 HG03516.hp2 HG03540.hp1 HG03540.hp2 HG03579.hp1 HG03579.hp2 HG03654.hp1 HG03654.hp2 HG03688.hp1 HG04115.hp1 HG04115.hp2 HG04204.hp2 HG06807.hp1 HG06807.hp2 NA18522.hp2 NA18612.hp1 NA18612.hp2 NA18906.hp1 NA18942.hp2 NA18951.hp2 NA18953.hp2 NA18954.hp2 NA18956.hp2 NA18961.hp2 NA18971.hp1 NA18973.hp2 NA18980.hp1 NA19007.hp2 NA19009.hp2 NA19030.hp1 NA19030.hp2 NA19043.hp1 NA19056.hp1 NA19057.hp1 NA19068.hp2 NA19087.hp2 NA19240.hp1 NA19240.hp2 NA20129.hp1 NA20129.hp2 NA20300.hp2 NA20752.hp1 NA20805.hp1 NA20905.hp1 NA21309.hp2	intron_variant	MODIFIER	c.296+14C>T c.296+14C>T	SPATA20	ENSG00000006282.22	transcript	ENST00000006658.11	protein_coding	3/16		chr17	50548467
chr17:50548788	C C	T T	4	a0001c0001t0001g0017 a0001c0001t0001g0075 a0001c0001t0001g0076 others(1): Show a0001c0001t0001g0017 a0001c0001t0001g0075 a0001c0001t0001g0076 a0007c0007t0001g0017	6	HG01167.hp2 HG01169.hp1 HG02895.hp2 others(3): Show HG01167.hp2 HG01169.hp1 HG02895.hp2 HG02976.hp1 HG03098.hp1 HG03130.hp1	intron_variant	MODIFIER	c.362-22C>T c.362-22C>T	SPATA20	ENSG00000006282.22	transcript	ENST00000006658.11	protein_coding	4/16		chr17	50548788
chr17:50549027	G G	A A	2	a0002c0002t0001g0057 a0002c0002t0001g0058 a0002c0002t0001g0057 a0002c0002t0001g0058	2	HG02647.hp1 HG02809.hp1 HG02647.hp1 HG02809.hp1	intron_variant	MODIFIER	c.517-16G>A c.517-16G>A	SPATA20	ENSG00000006282.22	transcript	ENST00000006658.11	protein_coding	5/16		chr17	50549027
chr17:50549028	C C	T T	27	a0002c0002t0001g0002 a0002c0002t0001g0008 a0002c0002t0001g0016 others(24): Show a0002c0002t0001g0002 a0002c0002t0001g0008 a0002c0002t0001g0016 a0002c0002t0001g0019 a0002c0002t0001g0020 a0002c0002t0001g0021 a0002c0002t0001g0029 a0002c0002t0001g0030 a0002c0002t0001g0031 a0002c0002t0001g0056 a0002c0002t0001g0057 a0002c0002t0001g0058 a0002c0002t0001g0062 a0002c0002t0001g0064 a0002c0002t0001g0065 a0002c0002t0001g0066 a0002c0002t0001g0067 a0002c0002t0001g0069 a0002c0002t0001g0070 a0002c0002t0001g0071 a0002c0002t0001g0072 a0002c0002t0001g0073 a0002c0002t0001g0074 a0002c0008t0001g0022 a0002c0025t0001g0063 a0010c0022t0001g0002 a0011c0024t0001g0068	99	HG00099.hp2 HG00642.hp1 HG00642.hp2 others(96): Show HG00099.hp2 HG00642.hp1 HG00642.hp2 HG00738.hp2 HG00741.hp1 HG01069.hp2 HG01071.hp1 HG01074.hp2 HG01099.hp1 HG01106.hp2 HG01168.hp2 HG01169.hp2 HG01175.hp1 HG01243.hp2 HG01255.hp1 HG01515.hp1 HG01517.hp1 HG01884.hp1 HG01884.hp2 HG01891.hp1 HG01934.hp1 HG01981.hp1 HG02055.hp2 HG02074.hp2 HG02080.hp1 HG02109.hp1 HG02109.hp2 HG02145.hp1 HG02258.hp1 HG02258.hp2 HG02280.hp1 HG02280.hp2 HG02451.hp1 HG02451.hp2 HG02486.hp1 HG02486.hp2 HG02559.hp1 HG02559.hp2 HG02615.hp1 HG02647.hp1 HG02683.hp2 HG02717.hp1 HG02809.hp1 HG02809.hp2 HG02818.hp2 HG02886.hp1 HG02886.hp2 HG02895.hp1 HG02896.hp1 HG02896.hp2 HG02897.hp1 HG02897.hp2 HG02922.hp1 HG02922.hp2 HG02965.hp1 HG02970.hp2 HG02976.hp2 HG03098.hp2 HG03139.hp1 HG03139.hp2 HG03209.hp2 HG03225.hp2 HG03239.hp1 HG03471.hp1 HG03471.hp2 HG03486.hp1 HG03486.hp2 HG03490.hp2 HG03516.hp1 HG03516.hp2 HG03540.hp1 HG03579.hp1 HG03579.hp2 HG03654.hp2 HG04204.hp2 HG06807.hp1 HG06807.hp2 NA18522.hp2 NA18906.hp1 NA18942.hp2 NA18953.hp2 NA18954.hp2 NA18956.hp2 NA18961.hp2 NA18971.hp1 NA19007.hp2 NA19030.hp1 NA19030.hp2 NA19043.hp1 NA19056.hp1 NA19057.hp1 NA19068.hp2 NA19240.hp1 NA19240.hp2 NA20129.hp2 NA20752.hp1 NA20805.hp1 NA20905.hp1 NA21309.hp2	intron_variant	MODIFIER	c.517-15C>T c.517-15C>T	SPATA20	ENSG00000006282.22	transcript	ENST00000006658.11	protein_coding	5/16		chr17	50549028
chr17:50549037	C C	T T	27	a0002c0002t0001g0002 a0002c0002t0001g0008 a0002c0002t0001g0016 others(24): Show a0002c0002t0001g0002 a0002c0002t0001g0008 a0002c0002t0001g0016 a0002c0002t0001g0019 a0002c0002t0001g0020 a0002c0002t0001g0021 a0002c0002t0001g0029 a0002c0002t0001g0030 a0002c0002t0001g0031 a0002c0002t0001g0056 a0002c0002t0001g0057 a0002c0002t0001g0058 a0002c0002t0001g0062 a0002c0002t0001g0064 a0002c0002t0001g0065 a0002c0002t0001g0066 a0002c0002t0001g0067 a0002c0002t0001g0069 a0002c0002t0001g0070 a0002c0002t0001g0071 a0002c0002t0001g0072 a0002c0002t0001g0073 a0002c0002t0001g0074 a0002c0008t0001g0022 a0002c0025t0001g0063 a0010c0022t0001g0002 a0011c0024t0001g0068	99	HG00099.hp2 HG00642.hp1 HG00642.hp2 others(96): Show HG00099.hp2 HG00642.hp1 HG00642.hp2 HG00738.hp2 HG00741.hp1 HG01069.hp2 HG01071.hp1 HG01074.hp2 HG01099.hp1 HG01106.hp2 HG01168.hp2 HG01169.hp2 HG01175.hp1 HG01243.hp2 HG01255.hp1 HG01515.hp1 HG01517.hp1 HG01884.hp1 HG01884.hp2 HG01891.hp1 HG01934.hp1 HG01981.hp1 HG02055.hp2 HG02074.hp2 HG02080.hp1 HG02109.hp1 HG02109.hp2 HG02145.hp1 HG02258.hp1 HG02258.hp2 HG02280.hp1 HG02280.hp2 HG02451.hp1 HG02451.hp2 HG02486.hp1 HG02486.hp2 HG02559.hp1 HG02559.hp2 HG02615.hp1 HG02647.hp1 HG02683.hp2 HG02717.hp1 HG02809.hp1 HG02809.hp2 HG02818.hp2 HG02886.hp1 HG02886.hp2 HG02895.hp1 HG02896.hp1 HG02896.hp2 HG02897.hp1 HG02897.hp2 HG02922.hp1 HG02922.hp2 HG02965.hp1 HG02970.hp2 HG02976.hp2 HG03098.hp2 HG03139.hp1 HG03139.hp2 HG03209.hp2 HG03225.hp2 HG03239.hp1 HG03471.hp1 HG03471.hp2 HG03486.hp1 HG03486.hp2 HG03490.hp2 HG03516.hp1 HG03516.hp2 HG03540.hp1 HG03579.hp1 HG03579.hp2 HG03654.hp2 HG04204.hp2 HG06807.hp1 HG06807.hp2 NA18522.hp2 NA18906.hp1 NA18942.hp2 NA18953.hp2 NA18954.hp2 NA18956.hp2 NA18961.hp2 NA18971.hp1 NA19007.hp2 NA19030.hp1 NA19030.hp2 NA19043.hp1 NA19056.hp1 NA19057.hp1 NA19068.hp2 NA19240.hp1 NA19240.hp2 NA20129.hp2 NA20752.hp1 NA20805.hp1 NA20905.hp1 NA21309.hp2	splice_region_variant&intron_variant	LOW	c.517-6C>T c.517-6C>T	SPATA20	ENSG00000006282.22	transcript	ENST00000006658.11	protein_coding	5/16		chr17	50549037
chr17:50549214	C C	T T	27	a0002c0002t0001g0002 a0002c0002t0001g0008 a0002c0002t0001g0016 others(24): Show a0002c0002t0001g0002 a0002c0002t0001g0008 a0002c0002t0001g0016 a0002c0002t0001g0019 a0002c0002t0001g0020 a0002c0002t0001g0021 a0002c0002t0001g0029 a0002c0002t0001g0030 a0002c0002t0001g0031 a0002c0002t0001g0056 a0002c0002t0001g0057 a0002c0002t0001g0058 a0002c0002t0001g0062 a0002c0002t0001g0064 a0002c0002t0001g0065 a0002c0002t0001g0066 a0002c0002t0001g0067 a0002c0002t0001g0069 a0002c0002t0001g0070 a0002c0002t0001g0071 a0002c0002t0001g0072 a0002c0002t0001g0073 a0002c0002t0001g0074 a0002c0008t0001g0022 a0002c0025t0001g0063 a0010c0022t0001g0002 a0011c0024t0001g0068	99	HG00099.hp2 HG00642.hp1 HG00642.hp2 others(96): Show HG00099.hp2 HG00642.hp1 HG00642.hp2 HG00738.hp2 HG00741.hp1 HG01069.hp2 HG01071.hp1 HG01074.hp2 HG01099.hp1 HG01106.hp2 HG01168.hp2 HG01169.hp2 HG01175.hp1 HG01243.hp2 HG01255.hp1 HG01515.hp1 HG01517.hp1 HG01884.hp1 HG01884.hp2 HG01891.hp1 HG01934.hp1 HG01981.hp1 HG02055.hp2 HG02074.hp2 HG02080.hp1 HG02109.hp1 HG02109.hp2 HG02145.hp1 HG02258.hp1 HG02258.hp2 HG02280.hp1 HG02280.hp2 HG02451.hp1 HG02451.hp2 HG02486.hp1 HG02486.hp2 HG02559.hp1 HG02559.hp2 HG02615.hp1 HG02647.hp1 HG02683.hp2 HG02717.hp1 HG02809.hp1 HG02809.hp2 HG02818.hp2 HG02886.hp1 HG02886.hp2 HG02895.hp1 HG02896.hp1 HG02896.hp2 HG02897.hp1 HG02897.hp2 HG02922.hp1 HG02922.hp2 HG02965.hp1 HG02970.hp2 HG02976.hp2 HG03098.hp2 HG03139.hp1 HG03139.hp2 HG03209.hp2 HG03225.hp2 HG03239.hp1 HG03471.hp1 HG03471.hp2 HG03486.hp1 HG03486.hp2 HG03490.hp2 HG03516.hp1 HG03516.hp2 HG03540.hp1 HG03579.hp1 HG03579.hp2 HG03654.hp2 HG04204.hp2 HG06807.hp1 HG06807.hp2 NA18522.hp2 NA18906.hp1 NA18942.hp2 NA18953.hp2 NA18954.hp2 NA18956.hp2 NA18961.hp2 NA18971.hp1 NA19007.hp2 NA19030.hp1 NA19030.hp2 NA19043.hp1 NA19056.hp1 NA19057.hp1 NA19068.hp2 NA19240.hp1 NA19240.hp2 NA20129.hp2 NA20752.hp1 NA20805.hp1 NA20905.hp1 NA21309.hp2	intron_variant	MODIFIER	c.660+28C>T c.660+28C>T	SPATA20	ENSG00000006282.22	transcript	ENST00000006658.11	protein_coding	6/16		chr17	50549214
chr17:50549265	G G	A A	27	a0002c0002t0001g0002 a0002c0002t0001g0008 a0002c0002t0001g0016 others(24): Show a0002c0002t0001g0002 a0002c0002t0001g0008 a0002c0002t0001g0016 a0002c0002t0001g0019 a0002c0002t0001g0020 a0002c0002t0001g0021 a0002c0002t0001g0029 a0002c0002t0001g0030 a0002c0002t0001g0031 a0002c0002t0001g0056 a0002c0002t0001g0057 a0002c0002t0001g0058 a0002c0002t0001g0062 a0002c0002t0001g0064 a0002c0002t0001g0065 a0002c0002t0001g0066 a0002c0002t0001g0067 a0002c0002t0001g0069 a0002c0002t0001g0070 a0002c0002t0001g0071 a0002c0002t0001g0072 a0002c0002t0001g0073 a0002c0002t0001g0074 a0002c0008t0001g0022 a0002c0025t0001g0063 a0010c0022t0001g0002 a0011c0024t0001g0068	99	HG00099.hp2 HG00642.hp1 HG00642.hp2 others(96): Show HG00099.hp2 HG00642.hp1 HG00642.hp2 HG00738.hp2 HG00741.hp1 HG01069.hp2 HG01071.hp1 HG01074.hp2 HG01099.hp1 HG01106.hp2 HG01168.hp2 HG01169.hp2 HG01175.hp1 HG01243.hp2 HG01255.hp1 HG01515.hp1 HG01517.hp1 HG01884.hp1 HG01884.hp2 HG01891.hp1 HG01934.hp1 HG01981.hp1 HG02055.hp2 HG02074.hp2 HG02080.hp1 HG02109.hp1 HG02109.hp2 HG02145.hp1 HG02258.hp1 HG02258.hp2 HG02280.hp1 HG02280.hp2 HG02451.hp1 HG02451.hp2 HG02486.hp1 HG02486.hp2 HG02559.hp1 HG02559.hp2 HG02615.hp1 HG02647.hp1 HG02683.hp2 HG02717.hp1 HG02809.hp1 HG02809.hp2 HG02818.hp2 HG02886.hp1 HG02886.hp2 HG02895.hp1 HG02896.hp1 HG02896.hp2 HG02897.hp1 HG02897.hp2 HG02922.hp1 HG02922.hp2 HG02965.hp1 HG02970.hp2 HG02976.hp2 HG03098.hp2 HG03139.hp1 HG03139.hp2 HG03209.hp2 HG03225.hp2 HG03239.hp1 HG03471.hp1 HG03471.hp2 HG03486.hp1 HG03486.hp2 HG03490.hp2 HG03516.hp1 HG03516.hp2 HG03540.hp1 HG03579.hp1 HG03579.hp2 HG03654.hp2 HG04204.hp2 HG06807.hp1 HG06807.hp2 NA18522.hp2 NA18906.hp1 NA18942.hp2 NA18953.hp2 NA18954.hp2 NA18956.hp2 NA18961.hp2 NA18971.hp1 NA19007.hp2 NA19030.hp1 NA19030.hp2 NA19043.hp1 NA19056.hp1 NA19057.hp1 NA19068.hp2 NA19240.hp1 NA19240.hp2 NA20129.hp2 NA20752.hp1 NA20805.hp1 NA20905.hp1 NA21309.hp2	intron_variant	MODIFIER	c.661-21G>A c.661-21G>A	SPATA20	ENSG00000006282.22	transcript	ENST00000006658.11	protein_coding	6/16		chr17	50549265
chr17:50549281	C C	T T	1	a0002c0002t0001g0074 a0002c0002t0001g0074	1	HG02074.hp2 HG02074.hp2	splice_region_variant&intron_variant	LOW	c.661-5C>T c.661-5C>T	SPATA20	ENSG00000006282.22	transcript	ENST00000006658.11	protein_coding	6/16		chr17	50549281
chr17:50549689	A A	G G	1	a0008c0011t0001g0028 a0008c0011t0001g0028	2	HG00733.hp2 NA20752.hp2 HG00733.hp2 NA20752.hp2	intron_variant	MODIFIER	c.862+202A>G c.862+202A>G	SPATA20	ENSG00000006282.22	transcript	ENST00000006658.11	protein_coding	7/16		chr17	50549689
chr17:50549718	G G	T T	2	a0003c0003t0001g0013 a0003c0014t0001g0013 a0003c0003t0001g0013 a0003c0014t0001g0013	5	HG00323.hp2 HG01123.hp2 HG01256.hp2 others(2): Show HG00323.hp2 HG01123.hp2 HG01256.hp2 HG01258.hp1 HG01358.hp1	intron_variant	MODIFIER	c.862+231G>T c.862+231G>T	SPATA20	ENSG00000006282.22	transcript	ENST00000006658.11	protein_coding	7/16		chr17	50549718
chr17:50549787	G G	C C	26	a0002c0002t0001g0002 a0002c0002t0001g0008 a0002c0002t0001g0016 others(23): Show a0002c0002t0001g0002 a0002c0002t0001g0008 a0002c0002t0001g0016 a0002c0002t0001g0019 a0002c0002t0001g0020 a0002c0002t0001g0021 a0002c0002t0001g0029 a0002c0002t0001g0030 a0002c0002t0001g0031 a0002c0002t0001g0056 a0002c0002t0001g0057 a0002c0002t0001g0058 a0002c0002t0001g0062 a0002c0002t0001g0064 a0002c0002t0001g0065 a0002c0002t0001g0066 a0002c0002t0001g0067 a0002c0002t0001g0069 a0002c0002t0001g0070 a0002c0002t0001g0071 a0002c0002t0001g0072 a0002c0002t0001g0074 a0002c0008t0001g0022 a0002c0025t0001g0063 a0010c0022t0001g0002 a0011c0024t0001g0068	98	HG00099.hp2 HG00642.hp1 HG00642.hp2 others(95): Show HG00099.hp2 HG00642.hp1 HG00642.hp2 HG00738.hp2 HG00741.hp1 HG01069.hp2 HG01071.hp1 HG01074.hp2 HG01099.hp1 HG01106.hp2 HG01168.hp2 HG01169.hp2 HG01175.hp1 HG01243.hp2 HG01255.hp1 HG01515.hp1 HG01517.hp1 HG01884.hp1 HG01884.hp2 HG01891.hp1 HG01934.hp1 HG01981.hp1 HG02055.hp2 HG02074.hp2 HG02080.hp1 HG02109.hp1 HG02109.hp2 HG02145.hp1 HG02258.hp1 HG02258.hp2 HG02280.hp1 HG02280.hp2 HG02451.hp1 HG02451.hp2 HG02486.hp2 HG02559.hp1 HG02559.hp2 HG02615.hp1 HG02647.hp1 HG02683.hp2 HG02717.hp1 HG02809.hp1 HG02809.hp2 HG02818.hp2 HG02886.hp1 HG02886.hp2 HG02895.hp1 HG02896.hp1 HG02896.hp2 HG02897.hp1 HG02897.hp2 HG02922.hp1 HG02922.hp2 HG02965.hp1 HG02970.hp2 HG02976.hp2 HG03098.hp2 HG03139.hp1 HG03139.hp2 HG03209.hp2 HG03225.hp2 HG03239.hp1 HG03471.hp1 HG03471.hp2 HG03486.hp1 HG03486.hp2 HG03490.hp2 HG03516.hp1 HG03516.hp2 HG03540.hp1 HG03579.hp1 HG03579.hp2 HG03654.hp2 HG04204.hp2 HG06807.hp1 HG06807.hp2 NA18522.hp2 NA18906.hp1 NA18942.hp2 NA18953.hp2 NA18954.hp2 NA18956.hp2 NA18961.hp2 NA18971.hp1 NA19007.hp2 NA19030.hp1 NA19030.hp2 NA19043.hp1 NA19056.hp1 NA19057.hp1 NA19068.hp2 NA19240.hp1 NA19240.hp2 NA20129.hp2 NA20752.hp1 NA20805.hp1 NA20905.hp1 NA21309.hp2	intron_variant	MODIFIER	c.863-198G>C c.863-198G>C	SPATA20	ENSG00000006282.22	transcript	ENST00000006658.11	protein_coding	7/16		chr17	50549787
chr17:50549795	A A	G G	3	a0004c0004t0002g0004 a0004c0004t0002g0061 a0004c0020t0002g0004 a0004c0004t0002g0004 a0004c0004t0002g0061 a0004c0020t0002g0004	12	HG01070.hp1 HG01192.hp1 HG01261.hp1 others(9): Show HG01070.hp1 HG01192.hp1 HG01261.hp1 HG01346.hp1 HG01516.hp1 HG02071.hp2 HG02293.hp2 HG03688.hp1 NA18612.hp2 NA18951.hp2 NA18973.hp2 NA18980.hp1	intron_variant	MODIFIER	c.863-190A>G c.863-190A>G	SPATA20	ENSG00000006282.22	transcript	ENST00000006658.11	protein_coding	7/16		chr17	50549795
chr17:50549950	A A	G G	1	a0005c0005t0001g0078 a0005c0005t0001g0078	1	HG04115.hp2 HG04115.hp2	intron_variant	MODIFIER	c.863-35A>G c.863-35A>G	SPATA20	ENSG00000006282.22	transcript	ENST00000006658.11	protein_coding	7/16		chr17	50549950
chr17:50550183	G G	A A	1	a0003c0003t0001g0048 a0003c0003t0001g0048	1	HG01358.hp2 HG01358.hp2	intron_variant	MODIFIER	c.994-25G>A c.994-25G>A	SPATA20	ENSG00000006282.22	transcript	ENST00000006658.11	protein_coding	8/16		chr17	50550183
chr17:50550422	T T	C C	1	a0001c0001t0001g0032 a0001c0001t0001g0032	1	NA18957.hp2 NA18957.hp2	intron_variant	MODIFIER	c.1098+110T>C c.1098+110T>C	SPATA20	ENSG00000006282.22	transcript	ENST00000006658.11	protein_coding	9/16		chr17	50550422
chr17:50550459	C C	T T	1	a0001c0001t0001g0047 a0001c0001t0001g0047	1	HG01109.hp2 HG01109.hp2	intron_variant	MODIFIER	c.1099-77C>T c.1099-77C>T	SPATA20	ENSG00000006282.22	transcript	ENST00000006658.11	protein_coding	9/16		chr17	50550459
chr17:50550465	A A	T T	1	a0002c0002t0001g0031 a0002c0002t0001g0031	2	HG03516.hp2 NA18906.hp1 HG03516.hp2 NA18906.hp1	intron_variant	MODIFIER	c.1099-71A>T c.1099-71A>T	SPATA20	ENSG00000006282.22	transcript	ENST00000006658.11	protein_coding	9/16		chr17	50550465
chr17:50550499	CCT CCT	C C	27	a0002c0002t0001g0002 a0002c0002t0001g0008 a0002c0002t0001g0016 others(24): Show a0002c0002t0001g0002 a0002c0002t0001g0008 a0002c0002t0001g0016 a0002c0002t0001g0019 a0002c0002t0001g0020 a0002c0002t0001g0021 a0002c0002t0001g0029 a0002c0002t0001g0030 a0002c0002t0001g0031 a0002c0002t0001g0056 a0002c0002t0001g0057 a0002c0002t0001g0058 a0002c0002t0001g0062 a0002c0002t0001g0064 a0002c0002t0001g0065 a0002c0002t0001g0066 a0002c0002t0001g0067 a0002c0002t0001g0069 a0002c0002t0001g0070 a0002c0002t0001g0071 a0002c0002t0001g0072 a0002c0002t0001g0073 a0002c0002t0001g0074 a0002c0008t0001g0022 a0002c0025t0001g0063 a0010c0022t0001g0002 a0011c0024t0001g0068	99	HG00099.hp2 HG00642.hp1 HG00642.hp2 others(96): Show HG00099.hp2 HG00642.hp1 HG00642.hp2 HG00738.hp2 HG00741.hp1 HG01069.hp2 HG01071.hp1 HG01074.hp2 HG01099.hp1 HG01106.hp2 HG01168.hp2 HG01169.hp2 HG01175.hp1 HG01243.hp2 HG01255.hp1 HG01515.hp1 HG01517.hp1 HG01884.hp1 HG01884.hp2 HG01891.hp1 HG01934.hp1 HG01981.hp1 HG02055.hp2 HG02074.hp2 HG02080.hp1 HG02109.hp1 HG02109.hp2 HG02145.hp1 HG02258.hp1 HG02258.hp2 HG02280.hp1 HG02280.hp2 HG02451.hp1 HG02451.hp2 HG02486.hp1 HG02486.hp2 HG02559.hp1 HG02559.hp2 HG02615.hp1 HG02647.hp1 HG02683.hp2 HG02717.hp1 HG02809.hp1 HG02809.hp2 HG02818.hp2 HG02886.hp1 HG02886.hp2 HG02895.hp1 HG02896.hp1 HG02896.hp2 HG02897.hp1 HG02897.hp2 HG02922.hp1 HG02922.hp2 HG02965.hp1 HG02970.hp2 HG02976.hp2 HG03098.hp2 HG03139.hp1 HG03139.hp2 HG03209.hp2 HG03225.hp2 HG03239.hp1 HG03471.hp1 HG03471.hp2 HG03486.hp1 HG03486.hp2 HG03490.hp2 HG03516.hp1 HG03516.hp2 HG03540.hp1 HG03579.hp1 HG03579.hp2 HG03654.hp2 HG04204.hp2 HG06807.hp1 HG06807.hp2 NA18522.hp2 NA18906.hp1 NA18942.hp2 NA18953.hp2 NA18954.hp2 NA18956.hp2 NA18961.hp2 NA18971.hp1 NA19007.hp2 NA19030.hp1 NA19030.hp2 NA19043.hp1 NA19056.hp1 NA19057.hp1 NA19068.hp2 NA19240.hp1 NA19240.hp2 NA20129.hp2 NA20752.hp1 NA20805.hp1 NA20905.hp1 NA21309.hp2	intron_variant	MODIFIER	c.1099-32_1099-31del others(2): Show c.1099-32_1099-31delCT	SPATA20	ENSG00000006282.22	transcript	ENST00000006658.11	protein_coding	9/16	INFO_REALIGN_3_PRIME	chr17	50550499
chr17:50550703	C C	G G	1	a0001c0006t0001g0046 a0001c0006t0001g0046	1	HG01361.hp1 HG01361.hp1	splice_region_variant&intron_variant	LOW	c.1174-5C>G c.1174-5C>G	SPATA20	ENSG00000006282.22	transcript	ENST00000006658.11	protein_coding	10/16		chr17	50550703
chr17:50551220	T T	A A	33	a0002c0002t0001g0002 a0002c0002t0001g0008 a0002c0002t0001g0016 others(30): Show a0002c0002t0001g0002 a0002c0002t0001g0008 a0002c0002t0001g0016 a0002c0002t0001g0019 a0002c0002t0001g0020 a0002c0002t0001g0021 a0002c0002t0001g0029 a0002c0002t0001g0030 a0002c0002t0001g0031 a0002c0002t0001g0056 a0002c0002t0001g0057 a0002c0002t0001g0058 a0002c0002t0001g0062 a0002c0002t0001g0064 a0002c0002t0001g0065 a0002c0002t0001g0066 a0002c0002t0001g0067 a0002c0002t0001g0069 a0002c0002t0001g0070 a0002c0002t0001g0071 a0002c0002t0001g0072 a0002c0002t0001g0073 a0002c0002t0001g0074 a0002c0008t0001g0022 a0002c0025t0001g0063 a0004c0004t0002g0004 a0004c0004t0002g0012 a0004c0004t0002g0015 a0004c0004t0002g0059 a0004c0004t0002g0061 a0004c0020t0002g0004 a0010c0022t0001g0002 a0011c0024t0001g0068	121	HG00099.hp2 HG00642.hp1 HG00642.hp2 others(118): Show HG00099.hp2 HG00642.hp1 HG00642.hp2 HG00738.hp2 HG00741.hp1 HG01069.hp2 HG01070.hp1 HG01071.hp1 HG01074.hp2 HG01099.hp1 HG01106.hp2 HG01168.hp2 HG01169.hp2 HG01175.hp1 HG01192.hp1 HG01243.hp1 HG01243.hp2 HG01255.hp1 HG01261.hp1 HG01346.hp1 HG01515.hp1 HG01516.hp1 HG01517.hp1 HG01884.hp1 HG01884.hp2 HG01891.hp1 HG01891.hp2 HG01934.hp1 HG01981.hp1 HG02055.hp2 HG02071.hp2 HG02074.hp2 HG02080.hp1 HG02109.hp1 HG02109.hp2 HG02145.hp1 HG02145.hp2 HG02258.hp1 HG02258.hp2 HG02280.hp1 HG02280.hp2 HG02293.hp2 HG02451.hp1 HG02451.hp2 HG02486.hp1 HG02486.hp2 HG02559.hp1 HG02559.hp2 HG02572.hp2 HG02615.hp1 HG02647.hp1 HG02683.hp2 HG02717.hp1 HG02717.hp2 HG02809.hp1 HG02809.hp2 HG02818.hp1 HG02818.hp2 HG02886.hp1 HG02886.hp2 HG02895.hp1 HG02896.hp1 HG02896.hp2 HG02897.hp1 HG02897.hp2 HG02922.hp1 HG02922.hp2 HG02965.hp1 HG02970.hp2 HG02976.hp2 HG03098.hp2 HG03130.hp2 HG03139.hp1 HG03139.hp2 HG03209.hp2 HG03225.hp2 HG03239.hp1 HG03453.hp2 HG03471.hp1 HG03471.hp2 HG03486.hp1 HG03486.hp2 HG03490.hp2 HG03516.hp1 HG03516.hp2 HG03540.hp1 HG03540.hp2 HG03579.hp1 HG03579.hp2 HG03654.hp2 HG03688.hp1 HG04204.hp2 HG06807.hp1 HG06807.hp2 NA18522.hp2 NA18612.hp2 NA18906.hp1 NA18942.hp2 NA18951.hp2 NA18953.hp2 NA18954.hp2 NA18956.hp2 NA18961.hp2 NA18971.hp1 NA18973.hp2 NA18980.hp1 NA19007.hp2 NA19030.hp1 NA19030.hp2 NA19043.hp1 NA19056.hp1 NA19057.hp1 NA19068.hp2 NA19240.hp1 NA19240.hp2 NA20129.hp2 NA20300.hp2 NA20752.hp1 NA20805.hp1 NA20905.hp1 NA21309.hp2	intron_variant	MODIFIER	c.1576+30T>A c.1576+30T>A	SPATA20	ENSG00000006282.22	transcript	ENST00000006658.11	protein_coding	12/16		chr17	50551220
chr17:50551291	C C	T T	1	a0001c0001t0001g0045 a0001c0001t0001g0045	1	NA18994.hp2 NA18994.hp2	intron_variant	MODIFIER	c.1576+101C>T c.1576+101C>T	SPATA20	ENSG00000006282.22	transcript	ENST00000006658.11	protein_coding	12/16		chr17	50551291
chr17:50551371	C C	T T	1	a0002c0002t0001g0072 a0002c0002t0001g0072	1	HG02976.hp2 HG02976.hp2	intron_variant	MODIFIER	c.1577-140C>T c.1577-140C>T	SPATA20	ENSG00000006282.22	transcript	ENST00000006658.11	protein_coding	12/16		chr17	50551371
chr17:50551930	G G	A A	6	a0004c0004t0002g0004 a0004c0004t0002g0012 a0004c0004t0002g0015 others(3): Show a0004c0004t0002g0004 a0004c0004t0002g0012 a0004c0004t0002g0015 a0004c0004t0002g0059 a0004c0004t0002g0061 a0004c0020t0002g0004	22	HG01070.hp1 HG01192.hp1 HG01243.hp1 others(19): Show HG01070.hp1 HG01192.hp1 HG01243.hp1 HG01261.hp1 HG01346.hp1 HG01516.hp1 HG01891.hp2 HG02071.hp2 HG02145.hp2 HG02293.hp2 HG02572.hp2 HG02717.hp2 HG02818.hp1 HG03130.hp2 HG03453.hp2 HG03540.hp2 HG03688.hp1 NA18612.hp2 NA18951.hp2 NA18973.hp2 NA18980.hp1 NA20300.hp2	intron_variant	MODIFIER	c.1746-39G>A c.1746-39G>A	SPATA20	ENSG00000006282.22	transcript	ENST00000006658.11	protein_coding	13/16		chr17	50551930
chr17:50551951	G G	C C	32	a0002c0002t0001g0002 a0002c0002t0001g0008 a0002c0002t0001g0016 others(29): Show a0002c0002t0001g0002 a0002c0002t0001g0008 a0002c0002t0001g0016 a0002c0002t0001g0019 a0002c0002t0001g0020 a0002c0002t0001g0021 a0002c0002t0001g0029 a0002c0002t0001g0030 a0002c0002t0001g0031 a0002c0002t0001g0056 a0002c0002t0001g0057 a0002c0002t0001g0062 a0002c0002t0001g0064 a0002c0002t0001g0065 a0002c0002t0001g0066 a0002c0002t0001g0067 a0002c0002t0001g0069 a0002c0002t0001g0070 a0002c0002t0001g0071 a0002c0002t0001g0072 a0002c0002t0001g0073 a0002c0002t0001g0074 a0002c0008t0001g0022 a0002c0025t0001g0063 a0004c0004t0002g0004 a0004c0004t0002g0012 a0004c0004t0002g0015 a0004c0004t0002g0059 a0004c0004t0002g0061 a0004c0020t0002g0004 a0010c0022t0001g0002 a0011c0024t0001g0068	120	HG00099.hp2 HG00642.hp1 HG00642.hp2 others(117): Show HG00099.hp2 HG00642.hp1 HG00642.hp2 HG00738.hp2 HG00741.hp1 HG01069.hp2 HG01070.hp1 HG01071.hp1 HG01074.hp2 HG01099.hp1 HG01106.hp2 HG01168.hp2 HG01169.hp2 HG01175.hp1 HG01192.hp1 HG01243.hp1 HG01243.hp2 HG01255.hp1 HG01261.hp1 HG01346.hp1 HG01515.hp1 HG01516.hp1 HG01517.hp1 HG01884.hp1 HG01884.hp2 HG01891.hp1 HG01891.hp2 HG01934.hp1 HG01981.hp1 HG02055.hp2 HG02071.hp2 HG02074.hp2 HG02080.hp1 HG02109.hp1 HG02109.hp2 HG02145.hp1 HG02145.hp2 HG02258.hp1 HG02258.hp2 HG02280.hp1 HG02280.hp2 HG02293.hp2 HG02451.hp1 HG02451.hp2 HG02486.hp1 HG02486.hp2 HG02559.hp1 HG02559.hp2 HG02572.hp2 HG02615.hp1 HG02683.hp2 HG02717.hp1 HG02717.hp2 HG02809.hp1 HG02809.hp2 HG02818.hp1 HG02818.hp2 HG02886.hp1 HG02886.hp2 HG02895.hp1 HG02896.hp1 HG02896.hp2 HG02897.hp1 HG02897.hp2 HG02922.hp1 HG02922.hp2 HG02965.hp1 HG02970.hp2 HG02976.hp2 HG03098.hp2 HG03130.hp2 HG03139.hp1 HG03139.hp2 HG03209.hp2 HG03225.hp2 HG03239.hp1 HG03453.hp2 HG03471.hp1 HG03471.hp2 HG03486.hp1 HG03486.hp2 HG03490.hp2 HG03516.hp1 HG03516.hp2 HG03540.hp1 HG03540.hp2 HG03579.hp1 HG03579.hp2 HG03654.hp2 HG03688.hp1 HG04204.hp2 HG06807.hp1 HG06807.hp2 NA18522.hp2 NA18612.hp2 NA18906.hp1 NA18942.hp2 NA18951.hp2 NA18953.hp2 NA18954.hp2 NA18956.hp2 NA18961.hp2 NA18971.hp1 NA18973.hp2 NA18980.hp1 NA19007.hp2 NA19030.hp1 NA19030.hp2 NA19043.hp1 NA19056.hp1 NA19057.hp1 NA19068.hp2 NA19240.hp1 NA19240.hp2 NA20129.hp2 NA20300.hp2 NA20752.hp1 NA20805.hp1 NA20905.hp1 NA21309.hp2	intron_variant	MODIFIER	c.1746-18G>C c.1746-18G>C	SPATA20	ENSG00000006282.22	transcript	ENST00000006658.11	protein_coding	13/16		chr17	50551951
chr17:50551951	G G	T T	1	a0002c0002t0001g0058 a0002c0002t0001g0058	1	HG02647.hp1 HG02647.hp1	intron_variant	MODIFIER	c.1746-18G>T c.1746-18G>T	SPATA20	ENSG00000006282.22	transcript	ENST00000006658.11	protein_coding	13/16		chr17	50551951
chr17:50552207	G G	C C	1	a0002c0002t0001g0020 a0002c0002t0001g0020	3	HG01884.hp2 HG03139.hp2 NA19240.hp2 HG01884.hp2 HG03139.hp2 NA19240.hp2	intron_variant	MODIFIER	c.1957+27G>C c.1957+27G>C	SPATA20	ENSG00000006282.22	transcript	ENST00000006658.11	protein_coding	14/16		chr17	50552207
chr17:50552212	C C	T T	1	a0001c0001t0001g0027 a0001c0001t0001g0027	2	HG02615.hp2 HG03225.hp1 HG02615.hp2 HG03225.hp1	intron_variant	MODIFIER	c.1957+32C>T c.1957+32C>T	SPATA20	ENSG00000006282.22	transcript	ENST00000006658.11	protein_coding	14/16		chr17	50552212
chr17:50552365	T T	C C	1	a0002c0002t0001g0016 a0002c0002t0001g0016	4	HG01069.hp2 HG01071.hp1 HG01891.hp1 others(1): Show HG01069.hp2 HG01071.hp1 HG01891.hp1 HG03471.hp1	intron_variant	MODIFIER	c.1957+185T>C c.1957+185T>C	SPATA20	ENSG00000006282.22	transcript	ENST00000006658.11	protein_coding	14/16		chr17	50552365
chr17:50552389	A A	C C	33	a0002c0002t0001g0002 a0002c0002t0001g0008 a0002c0002t0001g0016 others(30): Show a0002c0002t0001g0002 a0002c0002t0001g0008 a0002c0002t0001g0016 a0002c0002t0001g0019 a0002c0002t0001g0020 a0002c0002t0001g0021 a0002c0002t0001g0029 a0002c0002t0001g0030 a0002c0002t0001g0031 a0002c0002t0001g0056 a0002c0002t0001g0057 a0002c0002t0001g0058 a0002c0002t0001g0062 a0002c0002t0001g0064 a0002c0002t0001g0065 a0002c0002t0001g0066 a0002c0002t0001g0067 a0002c0002t0001g0069 a0002c0002t0001g0070 a0002c0002t0001g0071 a0002c0002t0001g0072 a0002c0002t0001g0073 a0002c0002t0001g0074 a0002c0008t0001g0022 a0002c0025t0001g0063 a0004c0004t0002g0004 a0004c0004t0002g0012 a0004c0004t0002g0015 a0004c0004t0002g0059 a0004c0004t0002g0061 a0004c0020t0002g0004 a0010c0022t0001g0002 a0011c0024t0001g0068	121	HG00099.hp2 HG00642.hp1 HG00642.hp2 others(118): Show HG00099.hp2 HG00642.hp1 HG00642.hp2 HG00738.hp2 HG00741.hp1 HG01069.hp2 HG01070.hp1 HG01071.hp1 HG01074.hp2 HG01099.hp1 HG01106.hp2 HG01168.hp2 HG01169.hp2 HG01175.hp1 HG01192.hp1 HG01243.hp1 HG01243.hp2 HG01255.hp1 HG01261.hp1 HG01346.hp1 HG01515.hp1 HG01516.hp1 HG01517.hp1 HG01884.hp1 HG01884.hp2 HG01891.hp1 HG01891.hp2 HG01934.hp1 HG01981.hp1 HG02055.hp2 HG02071.hp2 HG02074.hp2 HG02080.hp1 HG02109.hp1 HG02109.hp2 HG02145.hp1 HG02145.hp2 HG02258.hp1 HG02258.hp2 HG02280.hp1 HG02280.hp2 HG02293.hp2 HG02451.hp1 HG02451.hp2 HG02486.hp1 HG02486.hp2 HG02559.hp1 HG02559.hp2 HG02572.hp2 HG02615.hp1 HG02647.hp1 HG02683.hp2 HG02717.hp1 HG02717.hp2 HG02809.hp1 HG02809.hp2 HG02818.hp1 HG02818.hp2 HG02886.hp1 HG02886.hp2 HG02895.hp1 HG02896.hp1 HG02896.hp2 HG02897.hp1 HG02897.hp2 HG02922.hp1 HG02922.hp2 HG02965.hp1 HG02970.hp2 HG02976.hp2 HG03098.hp2 HG03130.hp2 HG03139.hp1 HG03139.hp2 HG03209.hp2 HG03225.hp2 HG03239.hp1 HG03453.hp2 HG03471.hp1 HG03471.hp2 HG03486.hp1 HG03486.hp2 HG03490.hp2 HG03516.hp1 HG03516.hp2 HG03540.hp1 HG03540.hp2 HG03579.hp1 HG03579.hp2 HG03654.hp2 HG03688.hp1 HG04204.hp2 HG06807.hp1 HG06807.hp2 NA18522.hp2 NA18612.hp2 NA18906.hp1 NA18942.hp2 NA18951.hp2 NA18953.hp2 NA18954.hp2 NA18956.hp2 NA18961.hp2 NA18971.hp1 NA18973.hp2 NA18980.hp1 NA19007.hp2 NA19030.hp1 NA19030.hp2 NA19043.hp1 NA19056.hp1 NA19057.hp1 NA19068.hp2 NA19240.hp1 NA19240.hp2 NA20129.hp2 NA20300.hp2 NA20752.hp1 NA20805.hp1 NA20905.hp1 NA21309.hp2	intron_variant	MODIFIER	c.1957+209A>C c.1957+209A>C	SPATA20	ENSG00000006282.22	transcript	ENST00000006658.11	protein_coding	14/16		chr17	50552389
chr17:50552441	C C	T T	33	a0002c0002t0001g0002 a0002c0002t0001g0008 a0002c0002t0001g0016 others(30): Show a0002c0002t0001g0002 a0002c0002t0001g0008 a0002c0002t0001g0016 a0002c0002t0001g0019 a0002c0002t0001g0020 a0002c0002t0001g0021 a0002c0002t0001g0029 a0002c0002t0001g0030 a0002c0002t0001g0031 a0002c0002t0001g0056 a0002c0002t0001g0057 a0002c0002t0001g0058 a0002c0002t0001g0062 a0002c0002t0001g0064 a0002c0002t0001g0065 a0002c0002t0001g0066 a0002c0002t0001g0067 a0002c0002t0001g0069 a0002c0002t0001g0070 a0002c0002t0001g0071 a0002c0002t0001g0072 a0002c0002t0001g0073 a0002c0002t0001g0074 a0002c0008t0001g0022 a0002c0025t0001g0063 a0004c0004t0002g0004 a0004c0004t0002g0012 a0004c0004t0002g0015 a0004c0004t0002g0059 a0004c0004t0002g0061 a0004c0020t0002g0004 a0010c0022t0001g0002 a0011c0024t0001g0068	121	HG00099.hp2 HG00642.hp1 HG00642.hp2 others(118): Show HG00099.hp2 HG00642.hp1 HG00642.hp2 HG00738.hp2 HG00741.hp1 HG01069.hp2 HG01070.hp1 HG01071.hp1 HG01074.hp2 HG01099.hp1 HG01106.hp2 HG01168.hp2 HG01169.hp2 HG01175.hp1 HG01192.hp1 HG01243.hp1 HG01243.hp2 HG01255.hp1 HG01261.hp1 HG01346.hp1 HG01515.hp1 HG01516.hp1 HG01517.hp1 HG01884.hp1 HG01884.hp2 HG01891.hp1 HG01891.hp2 HG01934.hp1 HG01981.hp1 HG02055.hp2 HG02071.hp2 HG02074.hp2 HG02080.hp1 HG02109.hp1 HG02109.hp2 HG02145.hp1 HG02145.hp2 HG02258.hp1 HG02258.hp2 HG02280.hp1 HG02280.hp2 HG02293.hp2 HG02451.hp1 HG02451.hp2 HG02486.hp1 HG02486.hp2 HG02559.hp1 HG02559.hp2 HG02572.hp2 HG02615.hp1 HG02647.hp1 HG02683.hp2 HG02717.hp1 HG02717.hp2 HG02809.hp1 HG02809.hp2 HG02818.hp1 HG02818.hp2 HG02886.hp1 HG02886.hp2 HG02895.hp1 HG02896.hp1 HG02896.hp2 HG02897.hp1 HG02897.hp2 HG02922.hp1 HG02922.hp2 HG02965.hp1 HG02970.hp2 HG02976.hp2 HG03098.hp2 HG03130.hp2 HG03139.hp1 HG03139.hp2 HG03209.hp2 HG03225.hp2 HG03239.hp1 HG03453.hp2 HG03471.hp1 HG03471.hp2 HG03486.hp1 HG03486.hp2 HG03490.hp2 HG03516.hp1 HG03516.hp2 HG03540.hp1 HG03540.hp2 HG03579.hp1 HG03579.hp2 HG03654.hp2 HG03688.hp1 HG04204.hp2 HG06807.hp1 HG06807.hp2 NA18522.hp2 NA18612.hp2 NA18906.hp1 NA18942.hp2 NA18951.hp2 NA18953.hp2 NA18954.hp2 NA18956.hp2 NA18961.hp2 NA18971.hp1 NA18973.hp2 NA18980.hp1 NA19007.hp2 NA19030.hp1 NA19030.hp2 NA19043.hp1 NA19056.hp1 NA19057.hp1 NA19068.hp2 NA19240.hp1 NA19240.hp2 NA20129.hp2 NA20300.hp2 NA20752.hp1 NA20805.hp1 NA20905.hp1 NA21309.hp2	intron_variant	MODIFIER	c.1957+261C>T c.1957+261C>T	SPATA20	ENSG00000006282.22	transcript	ENST00000006658.11	protein_coding	14/16		chr17	50552441
chr17:50552480	C C	CCTTT CCTTT	33	a0002c0002t0001g0002 a0002c0002t0001g0008 a0002c0002t0001g0016 others(30): Show a0002c0002t0001g0002 a0002c0002t0001g0008 a0002c0002t0001g0016 a0002c0002t0001g0019 a0002c0002t0001g0020 a0002c0002t0001g0021 a0002c0002t0001g0029 a0002c0002t0001g0030 a0002c0002t0001g0031 a0002c0002t0001g0056 a0002c0002t0001g0057 a0002c0002t0001g0058 a0002c0002t0001g0062 a0002c0002t0001g0064 a0002c0002t0001g0065 a0002c0002t0001g0066 a0002c0002t0001g0067 a0002c0002t0001g0069 a0002c0002t0001g0070 a0002c0002t0001g0071 a0002c0002t0001g0072 a0002c0002t0001g0073 a0002c0002t0001g0074 a0002c0008t0001g0022 a0002c0025t0001g0063 a0004c0004t0002g0004 a0004c0004t0002g0012 a0004c0004t0002g0015 a0004c0004t0002g0059 a0004c0004t0002g0061 a0004c0020t0002g0004 a0010c0022t0001g0002 a0011c0024t0001g0068	121	HG00099.hp2 HG00642.hp1 HG00642.hp2 others(118): Show HG00099.hp2 HG00642.hp1 HG00642.hp2 HG00738.hp2 HG00741.hp1 HG01069.hp2 HG01070.hp1 HG01071.hp1 HG01074.hp2 HG01099.hp1 HG01106.hp2 HG01168.hp2 HG01169.hp2 HG01175.hp1 HG01192.hp1 HG01243.hp1 HG01243.hp2 HG01255.hp1 HG01261.hp1 HG01346.hp1 HG01515.hp1 HG01516.hp1 HG01517.hp1 HG01884.hp1 HG01884.hp2 HG01891.hp1 HG01891.hp2 HG01934.hp1 HG01981.hp1 HG02055.hp2 HG02071.hp2 HG02074.hp2 HG02080.hp1 HG02109.hp1 HG02109.hp2 HG02145.hp1 HG02145.hp2 HG02258.hp1 HG02258.hp2 HG02280.hp1 HG02280.hp2 HG02293.hp2 HG02451.hp1 HG02451.hp2 HG02486.hp1 HG02486.hp2 HG02559.hp1 HG02559.hp2 HG02572.hp2 HG02615.hp1 HG02647.hp1 HG02683.hp2 HG02717.hp1 HG02717.hp2 HG02809.hp1 HG02809.hp2 HG02818.hp1 HG02818.hp2 HG02886.hp1 HG02886.hp2 HG02895.hp1 HG02896.hp1 HG02896.hp2 HG02897.hp1 HG02897.hp2 HG02922.hp1 HG02922.hp2 HG02965.hp1 HG02970.hp2 HG02976.hp2 HG03098.hp2 HG03130.hp2 HG03139.hp1 HG03139.hp2 HG03209.hp2 HG03225.hp2 HG03239.hp1 HG03453.hp2 HG03471.hp1 HG03471.hp2 HG03486.hp1 HG03486.hp2 HG03490.hp2 HG03516.hp1 HG03516.hp2 HG03540.hp1 HG03540.hp2 HG03579.hp1 HG03579.hp2 HG03654.hp2 HG03688.hp1 HG04204.hp2 HG06807.hp1 HG06807.hp2 NA18522.hp2 NA18612.hp2 NA18906.hp1 NA18942.hp2 NA18951.hp2 NA18953.hp2 NA18954.hp2 NA18956.hp2 NA18961.hp2 NA18971.hp1 NA18973.hp2 NA18980.hp1 NA19007.hp2 NA19030.hp1 NA19030.hp2 NA19043.hp1 NA19056.hp1 NA19057.hp1 NA19068.hp2 NA19240.hp1 NA19240.hp2 NA20129.hp2 NA20300.hp2 NA20752.hp1 NA20805.hp1 NA20905.hp1 NA21309.hp2	intron_variant	MODIFIER	c.1957+305_1957+308d others(6): Show c.1957+305_1957+308dupCTTT	SPATA20	ENSG00000006282.22	transcript	ENST00000006658.11	protein_coding	14/16	INFO_REALIGN_3_PRIME	chr17	50552480
chr17:50552483	T T	C C	1	a0001c0001t0001g0049 a0001c0001t0001g0049	1	HG04199.hp1 HG04199.hp1	intron_variant	MODIFIER	c.1957+303T>C c.1957+303T>C	SPATA20	ENSG00000006282.22	transcript	ENST00000006658.11	protein_coding	14/16		chr17	50552483
chr17:50552490	C C	T T	1	a0001c0001t0001g0049 a0001c0001t0001g0049	1	HG04199.hp1 HG04199.hp1	intron_variant	MODIFIER	c.1957+310C>T c.1957+310C>T	SPATA20	ENSG00000006282.22	transcript	ENST00000006658.11	protein_coding	14/16		chr17	50552490
chr17:50552547	C C	T T	1	a0001c0001t0001g0044 a0001c0001t0001g0044	1	NA18943.hp2 NA18943.hp2	intron_variant	MODIFIER	c.1957+367C>T c.1957+367C>T	SPATA20	ENSG00000006282.22	transcript	ENST00000006658.11	protein_coding	14/16		chr17	50552547
chr17:50552565	C C	CT CT	45	a0001c0001t0001g0001 a0001c0001t0001g0006 a0001c0001t0001g0007 others(42): Show a0001c0001t0001g0001 a0001c0001t0001g0006 a0001c0001t0001g0007 a0001c0001t0001g0010 a0001c0001t0001g0017 a0001c0001t0001g0023 a0001c0001t0001g0024 a0001c0001t0001g0027 a0001c0001t0001g0032 a0001c0001t0001g0036 a0001c0001t0001g0037 a0001c0001t0001g0038 a0001c0001t0001g0039 a0001c0001t0001g0040 a0001c0001t0001g0041 a0001c0001t0001g0043 a0001c0001t0001g0044 a0001c0001t0001g0045 a0001c0001t0001g0047 a0001c0001t0001g0052 a0001c0001t0001g0054 a0001c0001t0001g0055 a0001c0001t0001g0075 a0001c0001t0001g0076 a0001c0001t0001g0079 a0001c0001t0001g0080 a0001c0001t0003g0007 a0001c0006t0001g0001 a0001c0006t0001g0046 a0001c0016t0001g0060 a0001c0018t0001g0042 a0001c0021t0001g0001 a0002c0002t0001g0071 a0003c0003t0001g0026 a0005c0005t0001g0005 a0005c0005t0001g0018 a0005c0005t0001g0078 a0006c0009t0001g0005 a0007c0007t0001g0017 a0009c0010t0001g0001 a0012c0023t0001g0018 a0013c0012t0001g0001 a0014c0013t0001g0006 a0015c0017t0001g0001 a0017c0019t0001g0053	167	HG00099.hp1 HG00140.hp1 HG00140.hp2 others(164): Show HG00099.hp1 HG00140.hp1 HG00140.hp2 HG00280.hp1 HG00280.hp2 HG00408.hp1 HG00408.hp2 HG00597.hp1 HG00597.hp2 HG00621.hp1 HG00621.hp2 HG00639.hp1 HG00639.hp2 HG00673.hp1 HG00673.hp2 HG00733.hp1 HG00738.hp1 HG01069.hp1 HG01070.hp2 HG01071.hp2 HG01074.hp1 HG01081.hp1 HG01081.hp2 HG01099.hp2 HG01106.hp1 HG01109.hp1 HG01109.hp2 HG01123.hp1 HG01167.hp1 HG01167.hp2 HG01168.hp1 HG01169.hp1 HG01261.hp2 HG01361.hp1 HG01361.hp2 HG01433.hp1 HG01433.hp2 HG01516.hp2 HG01517.hp2 HG01934.hp2 HG01952.hp1 HG01952.hp2 HG01975.hp2 HG01978.hp1 HG01978.hp2 HG01981.hp2 HG01993.hp2 HG02015.hp1 HG02015.hp2 HG02027.hp1 HG02027.hp2 HG02040.hp1 HG02040.hp2 HG02055.hp1 HG02056.hp1 HG02056.hp2 HG02071.hp1 HG02074.hp1 HG02080.hp2 HG02083.hp1 HG02083.hp2 HG02129.hp1 HG02129.hp2 HG02132.hp1 HG02132.hp2 HG02148.hp1 HG02148.hp2 HG02165.hp1 HG02257.hp1 HG02257.hp2 HG02273.hp1 HG02293.hp1 HG02572.hp1 HG02602.hp1 HG02602.hp2 HG02615.hp2 HG02622.hp1 HG02622.hp2 HG02630.hp1 HG02630.hp2 HG02647.hp2 HG02683.hp1 HG02735.hp1 HG02735.hp2 HG02738.hp2 HG02895.hp2 HG02965.hp2 HG02970.hp1 HG02976.hp1 HG03017.hp2 HG03098.hp1 HG03130.hp1 HG03209.hp1 HG03225.hp1 HG03239.hp2 HG03453.hp1 HG03490.hp1 HG03654.hp1 HG03669.hp1 HG03669.hp2 HG03688.hp2 HG03704.hp2 HG03710.hp1 HG03831.hp1 HG03831.hp2 HG03834.hp2 HG03927.hp1 HG03927.hp2 HG03942.hp2 HG04115.hp1 HG04115.hp2 HG04184.hp1 HG04199.hp2 HG04204.hp1 HG04228.hp1 HG04228.hp2 NA18612.hp1 NA18906.hp2 NA18942.hp1 NA18943.hp1 NA18943.hp2 NA18945.hp1 NA18945.hp2 NA18948.hp2 NA18951.hp1 NA18952.hp2 NA18953.hp1 NA18957.hp2 NA18961.hp1 NA18963.hp1 NA18971.hp2 NA18977.hp1 NA18977.hp2 NA18980.hp2 NA18981.hp2 NA18984.hp1 NA18984.hp2 NA18986.hp2 NA18993.hp2 NA18994.hp1 NA18994.hp2 NA19002.hp1 NA19002.hp2 NA19007.hp1 NA19009.hp2 NA19010.hp1 NA19010.hp2 NA19056.hp2 NA19057.hp2 NA19058.hp1 NA19058.hp2 NA19065.hp1 NA19065.hp2 NA19068.hp1 NA19082.hp2 NA19087.hp1 NA19087.hp2 NA19088.hp1 NA19088.hp2 NA19089.hp1 NA19089.hp2 NA20129.hp1 NA20300.hp1 NA20805.hp2 NA20905.hp1 NA20905.hp2 homoSapiens_chm13v2.hp1	intron_variant	MODIFIER	c.1957+401dupT c.1957+401dupT	SPATA20	ENSG00000006282.22	transcript	ENST00000006658.11	protein_coding	14/16	INFO_REALIGN_3_PRIME	chr17	50552565
chr17:50552573	T T	C C	1	a0018c0026t0001g0033 a0018c0026t0001g0033	1	NA19043.hp2 NA19043.hp2	intron_variant	MODIFIER	c.1957+393T>C c.1957+393T>C	SPATA20	ENSG00000006282.22	transcript	ENST00000006658.11	protein_coding	14/16		chr17	50552573
chr17:50552714	A A	G G	1	a0002c0002t0001g0070 a0002c0002t0001g0070	1	HG03540.hp1 HG03540.hp1	intron_variant	MODIFIER	c.1957+534A>G c.1957+534A>G	SPATA20	ENSG00000006282.22	transcript	ENST00000006658.11	protein_coding	14/16		chr17	50552714
chr17:50552755	T T	C C	3	a0001c0001t0001g0079 a0001c0001t0001g0080 a0001c0016t0001g0060 a0001c0001t0001g0079 a0001c0001t0001g0080 a0001c0016t0001g0060	3	HG02965.hp2 HG03209.hp1 NA20129.hp1 HG02965.hp2 HG03209.hp1 NA20129.hp1	intron_variant	MODIFIER	c.1957+575T>C c.1957+575T>C	SPATA20	ENSG00000006282.22	transcript	ENST00000006658.11	protein_coding	14/16		chr17	50552755
chr17:50552912	A A	T T	1	a0002c0002t0001g0069 a0002c0002t0001g0069	1	HG00642.hp2 HG00642.hp2	intron_variant	MODIFIER	c.1957+732A>T c.1957+732A>T	SPATA20	ENSG00000006282.22	transcript	ENST00000006658.11	protein_coding	14/16		chr17	50552912
chr17:50552964	G G	A A	3	a0001c0001t0001g0079 a0001c0001t0001g0080 a0001c0016t0001g0060 a0001c0001t0001g0079 a0001c0001t0001g0080 a0001c0016t0001g0060	3	HG02965.hp2 HG03209.hp1 NA20129.hp1 HG02965.hp2 HG03209.hp1 NA20129.hp1	intron_variant	MODIFIER	c.1957+784G>A c.1957+784G>A	SPATA20	ENSG00000006282.22	transcript	ENST00000006658.11	protein_coding	14/16		chr17	50552964
chr17:50553077	A A	G G	6	a0001c0001t0001g0017 a0001c0001t0001g0049 a0001c0001t0001g0075 others(3): Show a0001c0001t0001g0017 a0001c0001t0001g0049 a0001c0001t0001g0075 a0001c0001t0001g0076 a0007c0007t0001g0017 a0016c0015t0001g0077	8	HG01167.hp2 HG01169.hp1 HG02895.hp2 others(5): Show HG01167.hp2 HG01169.hp1 HG02895.hp2 HG02976.hp1 HG03098.hp1 HG03130.hp1 HG04199.hp1 NA21309.hp1	intron_variant	MODIFIER	c.1957+897A>G c.1957+897A>G	SPATA20	ENSG00000006282.22	transcript	ENST00000006658.11	protein_coding	14/16		chr17	50553077
chr17:50553091	T T	C C	33	a0002c0002t0001g0002 a0002c0002t0001g0008 a0002c0002t0001g0016 others(30): Show a0002c0002t0001g0002 a0002c0002t0001g0008 a0002c0002t0001g0016 a0002c0002t0001g0019 a0002c0002t0001g0020 a0002c0002t0001g0021 a0002c0002t0001g0029 a0002c0002t0001g0030 a0002c0002t0001g0031 a0002c0002t0001g0056 a0002c0002t0001g0057 a0002c0002t0001g0058 a0002c0002t0001g0062 a0002c0002t0001g0064 a0002c0002t0001g0065 a0002c0002t0001g0066 a0002c0002t0001g0067 a0002c0002t0001g0069 a0002c0002t0001g0070 a0002c0002t0001g0071 a0002c0002t0001g0072 a0002c0002t0001g0073 a0002c0002t0001g0074 a0002c0008t0001g0022 a0002c0025t0001g0063 a0004c0004t0002g0004 a0004c0004t0002g0012 a0004c0004t0002g0015 a0004c0004t0002g0059 a0004c0004t0002g0061 a0004c0020t0002g0004 a0010c0022t0001g0002 a0011c0024t0001g0068	121	HG00099.hp2 HG00642.hp1 HG00642.hp2 others(118): Show HG00099.hp2 HG00642.hp1 HG00642.hp2 HG00738.hp2 HG00741.hp1 HG01069.hp2 HG01070.hp1 HG01071.hp1 HG01074.hp2 HG01099.hp1 HG01106.hp2 HG01168.hp2 HG01169.hp2 HG01175.hp1 HG01192.hp1 HG01243.hp1 HG01243.hp2 HG01255.hp1 HG01261.hp1 HG01346.hp1 HG01515.hp1 HG01516.hp1 HG01517.hp1 HG01884.hp1 HG01884.hp2 HG01891.hp1 HG01891.hp2 HG01934.hp1 HG01981.hp1 HG02055.hp2 HG02071.hp2 HG02074.hp2 HG02080.hp1 HG02109.hp1 HG02109.hp2 HG02145.hp1 HG02145.hp2 HG02258.hp1 HG02258.hp2 HG02280.hp1 HG02280.hp2 HG02293.hp2 HG02451.hp1 HG02451.hp2 HG02486.hp1 HG02486.hp2 HG02559.hp1 HG02559.hp2 HG02572.hp2 HG02615.hp1 HG02647.hp1 HG02683.hp2 HG02717.hp1 HG02717.hp2 HG02809.hp1 HG02809.hp2 HG02818.hp1 HG02818.hp2 HG02886.hp1 HG02886.hp2 HG02895.hp1 HG02896.hp1 HG02896.hp2 HG02897.hp1 HG02897.hp2 HG02922.hp1 HG02922.hp2 HG02965.hp1 HG02970.hp2 HG02976.hp2 HG03098.hp2 HG03130.hp2 HG03139.hp1 HG03139.hp2 HG03209.hp2 HG03225.hp2 HG03239.hp1 HG03453.hp2 HG03471.hp1 HG03471.hp2 HG03486.hp1 HG03486.hp2 HG03490.hp2 HG03516.hp1 HG03516.hp2 HG03540.hp1 HG03540.hp2 HG03579.hp1 HG03579.hp2 HG03654.hp2 HG03688.hp1 HG04204.hp2 HG06807.hp1 HG06807.hp2 NA18522.hp2 NA18612.hp2 NA18906.hp1 NA18942.hp2 NA18951.hp2 NA18953.hp2 NA18954.hp2 NA18956.hp2 NA18961.hp2 NA18971.hp1 NA18973.hp2 NA18980.hp1 NA19007.hp2 NA19030.hp1 NA19030.hp2 NA19043.hp1 NA19056.hp1 NA19057.hp1 NA19068.hp2 NA19240.hp1 NA19240.hp2 NA20129.hp2 NA20300.hp2 NA20752.hp1 NA20805.hp1 NA20905.hp1 NA21309.hp2	intron_variant	MODIFIER	c.1957+911T>C c.1957+911T>C	SPATA20	ENSG00000006282.22	transcript	ENST00000006658.11	protein_coding	14/16		chr17	50553091
chr17:50553107	G G	A A	1	a0001c0001t0001g0034 a0001c0001t0001g0034	1	HG02165.hp2 HG02165.hp2	intron_variant	MODIFIER	c.1957+927G>A c.1957+927G>A	SPATA20	ENSG00000006282.22	transcript	ENST00000006658.11	protein_coding	14/16		chr17	50553107
chr17:50553219	A A	T T	33	a0002c0002t0001g0002 a0002c0002t0001g0008 a0002c0002t0001g0016 others(30): Show a0002c0002t0001g0002 a0002c0002t0001g0008 a0002c0002t0001g0016 a0002c0002t0001g0019 a0002c0002t0001g0020 a0002c0002t0001g0021 a0002c0002t0001g0029 a0002c0002t0001g0030 a0002c0002t0001g0031 a0002c0002t0001g0056 a0002c0002t0001g0057 a0002c0002t0001g0058 a0002c0002t0001g0062 a0002c0002t0001g0064 a0002c0002t0001g0065 a0002c0002t0001g0066 a0002c0002t0001g0067 a0002c0002t0001g0069 a0002c0002t0001g0070 a0002c0002t0001g0071 a0002c0002t0001g0072 a0002c0002t0001g0073 a0002c0002t0001g0074 a0002c0008t0001g0022 a0002c0025t0001g0063 a0004c0004t0002g0004 a0004c0004t0002g0012 a0004c0004t0002g0015 a0004c0004t0002g0059 a0004c0004t0002g0061 a0004c0020t0002g0004 a0010c0022t0001g0002 a0011c0024t0001g0068	121	HG00099.hp2 HG00642.hp1 HG00642.hp2 others(118): Show HG00099.hp2 HG00642.hp1 HG00642.hp2 HG00738.hp2 HG00741.hp1 HG01069.hp2 HG01070.hp1 HG01071.hp1 HG01074.hp2 HG01099.hp1 HG01106.hp2 HG01168.hp2 HG01169.hp2 HG01175.hp1 HG01192.hp1 HG01243.hp1 HG01243.hp2 HG01255.hp1 HG01261.hp1 HG01346.hp1 HG01515.hp1 HG01516.hp1 HG01517.hp1 HG01884.hp1 HG01884.hp2 HG01891.hp1 HG01891.hp2 HG01934.hp1 HG01981.hp1 HG02055.hp2 HG02071.hp2 HG02074.hp2 HG02080.hp1 HG02109.hp1 HG02109.hp2 HG02145.hp1 HG02145.hp2 HG02258.hp1 HG02258.hp2 HG02280.hp1 HG02280.hp2 HG02293.hp2 HG02451.hp1 HG02451.hp2 HG02486.hp1 HG02486.hp2 HG02559.hp1 HG02559.hp2 HG02572.hp2 HG02615.hp1 HG02647.hp1 HG02683.hp2 HG02717.hp1 HG02717.hp2 HG02809.hp1 HG02809.hp2 HG02818.hp1 HG02818.hp2 HG02886.hp1 HG02886.hp2 HG02895.hp1 HG02896.hp1 HG02896.hp2 HG02897.hp1 HG02897.hp2 HG02922.hp1 HG02922.hp2 HG02965.hp1 HG02970.hp2 HG02976.hp2 HG03098.hp2 HG03130.hp2 HG03139.hp1 HG03139.hp2 HG03209.hp2 HG03225.hp2 HG03239.hp1 HG03453.hp2 HG03471.hp1 HG03471.hp2 HG03486.hp1 HG03486.hp2 HG03490.hp2 HG03516.hp1 HG03516.hp2 HG03540.hp1 HG03540.hp2 HG03579.hp1 HG03579.hp2 HG03654.hp2 HG03688.hp1 HG04204.hp2 HG06807.hp1 HG06807.hp2 NA18522.hp2 NA18612.hp2 NA18906.hp1 NA18942.hp2 NA18951.hp2 NA18953.hp2 NA18954.hp2 NA18956.hp2 NA18961.hp2 NA18971.hp1 NA18973.hp2 NA18980.hp1 NA19007.hp2 NA19030.hp1 NA19030.hp2 NA19043.hp1 NA19056.hp1 NA19057.hp1 NA19068.hp2 NA19240.hp1 NA19240.hp2 NA20129.hp2 NA20300.hp2 NA20752.hp1 NA20805.hp1 NA20905.hp1 NA21309.hp2	intron_variant	MODIFIER	c.1958-1032A>T c.1958-1032A>T	SPATA20	ENSG00000006282.22	transcript	ENST00000006658.11	protein_coding	14/16		chr17	50553219
chr17:50553337	G G	C C	1	a0001c0001t0001g0032 a0001c0001t0001g0032	1	NA18957.hp2 NA18957.hp2	intron_variant	MODIFIER	c.1958-914G>C c.1958-914G>C	SPATA20	ENSG00000006282.22	transcript	ENST00000006658.11	protein_coding	14/16		chr17	50553337
chr17:50553453	T T	C C	33	a0002c0002t0001g0002 a0002c0002t0001g0008 a0002c0002t0001g0016 others(30): Show a0002c0002t0001g0002 a0002c0002t0001g0008 a0002c0002t0001g0016 a0002c0002t0001g0019 a0002c0002t0001g0020 a0002c0002t0001g0021 a0002c0002t0001g0029 a0002c0002t0001g0030 a0002c0002t0001g0031 a0002c0002t0001g0056 a0002c0002t0001g0057 a0002c0002t0001g0058 a0002c0002t0001g0062 a0002c0002t0001g0064 a0002c0002t0001g0065 a0002c0002t0001g0066 a0002c0002t0001g0067 a0002c0002t0001g0069 a0002c0002t0001g0070 a0002c0002t0001g0071 a0002c0002t0001g0072 a0002c0002t0001g0073 a0002c0002t0001g0074 a0002c0008t0001g0022 a0002c0025t0001g0063 a0004c0004t0002g0004 a0004c0004t0002g0012 a0004c0004t0002g0015 a0004c0004t0002g0059 a0004c0004t0002g0061 a0004c0020t0002g0004 a0010c0022t0001g0002 a0011c0024t0001g0068	121	HG00099.hp2 HG00642.hp1 HG00642.hp2 others(118): Show HG00099.hp2 HG00642.hp1 HG00642.hp2 HG00738.hp2 HG00741.hp1 HG01069.hp2 HG01070.hp1 HG01071.hp1 HG01074.hp2 HG01099.hp1 HG01106.hp2 HG01168.hp2 HG01169.hp2 HG01175.hp1 HG01192.hp1 HG01243.hp1 HG01243.hp2 HG01255.hp1 HG01261.hp1 HG01346.hp1 HG01515.hp1 HG01516.hp1 HG01517.hp1 HG01884.hp1 HG01884.hp2 HG01891.hp1 HG01891.hp2 HG01934.hp1 HG01981.hp1 HG02055.hp2 HG02071.hp2 HG02074.hp2 HG02080.hp1 HG02109.hp1 HG02109.hp2 HG02145.hp1 HG02145.hp2 HG02258.hp1 HG02258.hp2 HG02280.hp1 HG02280.hp2 HG02293.hp2 HG02451.hp1 HG02451.hp2 HG02486.hp1 HG02486.hp2 HG02559.hp1 HG02559.hp2 HG02572.hp2 HG02615.hp1 HG02647.hp1 HG02683.hp2 HG02717.hp1 HG02717.hp2 HG02809.hp1 HG02809.hp2 HG02818.hp1 HG02818.hp2 HG02886.hp1 HG02886.hp2 HG02895.hp1 HG02896.hp1 HG02896.hp2 HG02897.hp1 HG02897.hp2 HG02922.hp1 HG02922.hp2 HG02965.hp1 HG02970.hp2 HG02976.hp2 HG03098.hp2 HG03130.hp2 HG03139.hp1 HG03139.hp2 HG03209.hp2 HG03225.hp2 HG03239.hp1 HG03453.hp2 HG03471.hp1 HG03471.hp2 HG03486.hp1 HG03486.hp2 HG03490.hp2 HG03516.hp1 HG03516.hp2 HG03540.hp1 HG03540.hp2 HG03579.hp1 HG03579.hp2 HG03654.hp2 HG03688.hp1 HG04204.hp2 HG06807.hp1 HG06807.hp2 NA18522.hp2 NA18612.hp2 NA18906.hp1 NA18942.hp2 NA18951.hp2 NA18953.hp2 NA18954.hp2 NA18956.hp2 NA18961.hp2 NA18971.hp1 NA18973.hp2 NA18980.hp1 NA19007.hp2 NA19030.hp1 NA19030.hp2 NA19043.hp1 NA19056.hp1 NA19057.hp1 NA19068.hp2 NA19240.hp1 NA19240.hp2 NA20129.hp2 NA20300.hp2 NA20752.hp1 NA20805.hp1 NA20905.hp1 NA21309.hp2	intron_variant	MODIFIER	c.1958-798T>C c.1958-798T>C	SPATA20	ENSG00000006282.22	transcript	ENST00000006658.11	protein_coding	14/16		chr17	50553453
chr17:50553493	G G	T T	4	a0001c0001t0001g0017 a0001c0001t0001g0075 a0001c0001t0001g0076 others(1): Show a0001c0001t0001g0017 a0001c0001t0001g0075 a0001c0001t0001g0076 a0007c0007t0001g0017	6	HG01167.hp2 HG01169.hp1 HG02895.hp2 others(3): Show HG01167.hp2 HG01169.hp1 HG02895.hp2 HG02976.hp1 HG03098.hp1 HG03130.hp1	intron_variant	MODIFIER	c.1958-758G>T c.1958-758G>T	SPATA20	ENSG00000006282.22	transcript	ENST00000006658.11	protein_coding	14/16		chr17	50553493
chr17:50553540	G G	A A	1	a0016c0015t0001g0077 a0016c0015t0001g0077	1	NA21309.hp1 NA21309.hp1	intron_variant	MODIFIER	c.1958-711G>A c.1958-711G>A	SPATA20	ENSG00000006282.22	transcript	ENST00000006658.11	protein_coding	14/16		chr17	50553540
chr17:50553559	C C	CT CT	34	a0001c0001t0001g0001 a0001c0001t0001g0006 a0001c0001t0001g0007 others(31): Show a0001c0001t0001g0001 a0001c0001t0001g0006 a0001c0001t0001g0007 a0001c0001t0001g0010 a0001c0001t0001g0011 a0001c0001t0001g0017 a0001c0001t0001g0023 a0001c0001t0001g0024 a0001c0001t0001g0032 a0001c0001t0001g0034 a0001c0001t0001g0039 a0001c0001t0001g0040 a0001c0001t0001g0041 a0001c0001t0001g0043 a0001c0001t0001g0044 a0001c0001t0001g0045 a0001c0001t0001g0047 a0001c0001t0001g0052 a0001c0001t0001g0054 a0001c0001t0001g0055 a0001c0001t0001g0075 a0001c0001t0001g0076 a0001c0001t0003g0007 a0001c0006t0001g0001 a0001c0006t0001g0046 a0001c0018t0001g0042 a0001c0021t0001g0001 a0007c0007t0001g0017 a0009c0010t0001g0001 a0013c0012t0001g0001 a0014c0013t0001g0006 a0015c0017t0001g0001 a0017c0019t0001g0053 a0018c0026t0001g0033	149	HG00099.hp1 HG00140.hp2 HG00280.hp2 others(146): Show HG00099.hp1 HG00140.hp2 HG00280.hp2 HG00408.hp1 HG00408.hp2 HG00597.hp1 HG00597.hp2 HG00621.hp1 HG00621.hp2 HG00639.hp1 HG00639.hp2 HG00673.hp1 HG00673.hp2 HG00733.hp1 HG00738.hp1 HG01069.hp1 HG01070.hp2 HG01071.hp2 HG01081.hp1 HG01081.hp2 HG01099.hp2 HG01106.hp1 HG01109.hp1 HG01109.hp2 HG01167.hp2 HG01168.hp1 HG01169.hp1 HG01361.hp1 HG01361.hp2 HG01433.hp1 HG01433.hp2 HG01516.hp2 HG01517.hp2 HG01934.hp2 HG01952.hp2 HG01975.hp2 HG01978.hp1 HG01978.hp2 HG01981.hp2 HG01993.hp2 HG02015.hp1 HG02015.hp2 HG02027.hp1 HG02027.hp2 HG02040.hp1 HG02040.hp2 HG02055.hp1 HG02056.hp1 HG02056.hp2 HG02071.hp1 HG02074.hp1 HG02080.hp2 HG02083.hp1 HG02083.hp2 HG02129.hp1 HG02129.hp2 HG02132.hp1 HG02132.hp2 HG02148.hp1 HG02148.hp2 HG02165.hp1 HG02165.hp2 HG02257.hp1 HG02257.hp2 HG02273.hp1 HG02293.hp1 HG02572.hp1 HG02602.hp2 HG02622.hp1 HG02622.hp2 HG02630.hp1 HG02630.hp2 HG02647.hp2 HG02683.hp1 HG02735.hp1 HG02895.hp2 HG02970.hp1 HG02976.hp1 HG03017.hp2 HG03098.hp1 HG03130.hp1 HG03239.hp2 HG03669.hp1 HG03669.hp2 HG03688.hp2 HG03704.hp2 HG03710.hp1 HG03831.hp1 HG03831.hp2 HG03834.hp2 HG03927.hp1 HG03927.hp2 HG03942.hp2 HG04184.hp1 HG04199.hp2 HG04204.hp1 HG04228.hp1 HG04228.hp2 NA18522.hp1 NA18906.hp2 NA18942.hp1 NA18943.hp1 NA18943.hp2 NA18945.hp1 NA18945.hp2 NA18948.hp2 NA18951.hp1 NA18952.hp2 NA18953.hp1 NA18954.hp1 NA18956.hp1 NA18957.hp2 NA18961.hp1 NA18963.hp1 NA18971.hp2 NA18977.hp1 NA18977.hp2 NA18980.hp2 NA18981.hp2 NA18984.hp2 NA18986.hp1 NA18986.hp2 NA18993.hp2 NA18994.hp1 NA18994.hp2 NA19002.hp1 NA19002.hp2 NA19007.hp1 NA19009.hp1 NA19010.hp1 NA19010.hp2 NA19043.hp2 NA19056.hp2 NA19057.hp2 NA19058.hp1 NA19058.hp2 NA19065.hp1 NA19065.hp2 NA19068.hp1 NA19082.hp2 NA19087.hp1 NA19088.hp1 NA19088.hp2 NA19089.hp1 NA19089.hp2 NA20300.hp1 NA20805.hp2 NA20905.hp2 homoSapiens_chm13v2.hp1	intron_variant	MODIFIER	c.1958-676dupT c.1958-676dupT	SPATA20	ENSG00000006282.22	transcript	ENST00000006658.11	protein_coding	14/16	INFO_REALIGN_3_PRIME	chr17	50553559
chr17:50553559	CT CT	C C	33	a0002c0002t0001g0002 a0002c0002t0001g0019 a0002c0002t0001g0021 others(30): Show a0002c0002t0001g0002 a0002c0002t0001g0019 a0002c0002t0001g0021 a0002c0002t0001g0029 a0002c0002t0001g0031 a0002c0002t0001g0056 a0002c0002t0001g0057 a0002c0002t0001g0058 a0002c0002t0001g0062 a0002c0002t0001g0064 a0002c0002t0001g0065 a0002c0002t0001g0066 a0002c0002t0001g0067 a0002c0002t0001g0069 a0002c0002t0001g0070 a0002c0002t0001g0071 a0002c0002t0001g0072 a0002c0002t0001g0073 a0002c0002t0001g0074 a0002c0008t0001g0022 a0002c0025t0001g0063 a0004c0004t0002g0004 a0004c0004t0002g0012 a0004c0004t0002g0015 a0004c0004t0002g0059 a0004c0020t0002g0004 a0005c0005t0001g0005 a0005c0005t0001g0018 a0005c0005t0001g0078 a0006c0009t0001g0005 a0010c0022t0001g0002 a0011c0024t0001g0068 a0012c0023t0001g0018	117	HG00099.hp2 HG00140.hp1 HG00280.hp1 others(114): Show HG00099.hp2 HG00140.hp1 HG00280.hp1 HG00642.hp1 HG00642.hp2 HG00738.hp2 HG00741.hp1 HG01070.hp1 HG01074.hp1 HG01074.hp2 HG01099.hp1 HG01106.hp2 HG01123.hp1 HG01168.hp2 HG01169.hp2 HG01192.hp1 HG01243.hp1 HG01243.hp2 HG01255.hp1 HG01261.hp1 HG01261.hp2 HG01346.hp1 HG01516.hp1 HG01884.hp1 HG01891.hp2 HG01934.hp1 HG01952.hp1 HG01981.hp1 HG02055.hp2 HG02071.hp2 HG02074.hp2 HG02080.hp1 HG02109.hp1 HG02109.hp2 HG02145.hp2 HG02258.hp2 HG02280.hp1 HG02280.hp2 HG02293.hp2 HG02451.hp1 HG02451.hp2 HG02486.hp1 HG02486.hp2 HG02559.hp1 HG02559.hp2 HG02572.hp2 HG02602.hp1 HG02615.hp1 HG02647.hp1 HG02683.hp2 HG02717.hp2 HG02735.hp2 HG02809.hp1 HG02809.hp2 HG02818.hp1 HG02818.hp2 HG02886.hp1 HG02886.hp2 HG02895.hp1 HG02896.hp1 HG02896.hp2 HG02897.hp1 HG02897.hp2 HG02922.hp1 HG02922.hp2 HG02965.hp1 HG02970.hp2 HG02976.hp2 HG03098.hp2 HG03130.hp2 HG03139.hp1 HG03209.hp2 HG03225.hp2 HG03239.hp1 HG03453.hp2 HG03471.hp2 HG03486.hp1 HG03490.hp2 HG03516.hp2 HG03540.hp1 HG03540.hp2 HG03579.hp1 HG03579.hp2 HG03654.hp1 HG03654.hp2 HG03688.hp1 HG04115.hp1 HG04115.hp2 HG04204.hp2 HG06807.hp1 NA18522.hp2 NA18612.hp1 NA18612.hp2 NA18906.hp1 NA18942.hp2 NA18951.hp2 NA18953.hp2 NA18954.hp2 NA18956.hp2 NA18961.hp2 NA18971.hp1 NA18980.hp1 NA19007.hp2 NA19009.hp2 NA19030.hp1 NA19030.hp2 NA19043.hp1 NA19056.hp1 NA19057.hp1 NA19068.hp2 NA19087.hp2 NA20129.hp2 NA20300.hp2 NA20752.hp1 NA20805.hp1 NA20905.hp1 NA21309.hp2	intron_variant	MODIFIER	c.1958-676delT c.1958-676delT	SPATA20	ENSG00000006282.22	transcript	ENST00000006658.11	protein_coding	14/16	INFO_REALIGN_3_PRIME	chr17	50553559
chr17:50553559	CTT CTT	C C	2	a0002c0002t0001g0008 a0002c0002t0001g0020 a0002c0002t0001g0008 a0002c0002t0001g0020	11	HG01515.hp1 HG01517.hp1 HG01884.hp2 others(8): Show HG01515.hp1 HG01517.hp1 HG01884.hp2 HG02258.hp1 HG02717.hp1 HG03139.hp2 HG03486.hp2 HG03516.hp1 HG06807.hp2 NA19240.hp1 NA19240.hp2	intron_variant	MODIFIER	c.1958-677_1958-676d others(4): Show c.1958-677_1958-676delTT	SPATA20	ENSG00000006282.22	transcript	ENST00000006658.11	protein_coding	14/16	INFO_REALIGN_3_PRIME	chr17	50553559
chr17:50553607	G G	T T	1	a0003c0003t0001g0051 a0003c0003t0001g0051	1	HG03834.hp1 HG03834.hp1	intron_variant	MODIFIER	c.1958-644G>T c.1958-644G>T	SPATA20	ENSG00000006282.22	transcript	ENST00000006658.11	protein_coding	14/16		chr17	50553607
chr17:50553764	G G	A A	6	a0004c0004t0002g0004 a0004c0004t0002g0012 a0004c0004t0002g0015 others(3): Show a0004c0004t0002g0004 a0004c0004t0002g0012 a0004c0004t0002g0015 a0004c0004t0002g0059 a0004c0004t0002g0061 a0004c0020t0002g0004	22	HG01070.hp1 HG01192.hp1 HG01243.hp1 others(19): Show HG01070.hp1 HG01192.hp1 HG01243.hp1 HG01261.hp1 HG01346.hp1 HG01516.hp1 HG01891.hp2 HG02071.hp2 HG02145.hp2 HG02293.hp2 HG02572.hp2 HG02717.hp2 HG02818.hp1 HG03130.hp2 HG03453.hp2 HG03540.hp2 HG03688.hp1 NA18612.hp2 NA18951.hp2 NA18973.hp2 NA18980.hp1 NA20300.hp2	intron_variant	MODIFIER	c.1958-487G>A c.1958-487G>A	SPATA20	ENSG00000006282.22	transcript	ENST00000006658.11	protein_coding	14/16		chr17	50553764
chr17:50553836	G G	A A	1	a0002c0002t0001g0062 a0002c0002t0001g0062	1	NA18942.hp2 NA18942.hp2	intron_variant	MODIFIER	c.1958-415G>A c.1958-415G>A	SPATA20	ENSG00000006282.22	transcript	ENST00000006658.11	protein_coding	14/16		chr17	50553836
chr17:50553963	T T	C C	33	a0002c0002t0001g0002 a0002c0002t0001g0008 a0002c0002t0001g0016 others(30): Show a0002c0002t0001g0002 a0002c0002t0001g0008 a0002c0002t0001g0016 a0002c0002t0001g0019 a0002c0002t0001g0020 a0002c0002t0001g0021 a0002c0002t0001g0029 a0002c0002t0001g0030 a0002c0002t0001g0031 a0002c0002t0001g0056 a0002c0002t0001g0057 a0002c0002t0001g0058 a0002c0002t0001g0062 a0002c0002t0001g0064 a0002c0002t0001g0065 a0002c0002t0001g0066 a0002c0002t0001g0067 a0002c0002t0001g0069 a0002c0002t0001g0070 a0002c0002t0001g0071 a0002c0002t0001g0072 a0002c0002t0001g0073 a0002c0002t0001g0074 a0002c0008t0001g0022 a0002c0025t0001g0063 a0004c0004t0002g0004 a0004c0004t0002g0012 a0004c0004t0002g0015 a0004c0004t0002g0059 a0004c0004t0002g0061 a0004c0020t0002g0004 a0010c0022t0001g0002 a0011c0024t0001g0068	121	HG00099.hp2 HG00642.hp1 HG00642.hp2 others(118): Show HG00099.hp2 HG00642.hp1 HG00642.hp2 HG00738.hp2 HG00741.hp1 HG01069.hp2 HG01070.hp1 HG01071.hp1 HG01074.hp2 HG01099.hp1 HG01106.hp2 HG01168.hp2 HG01169.hp2 HG01175.hp1 HG01192.hp1 HG01243.hp1 HG01243.hp2 HG01255.hp1 HG01261.hp1 HG01346.hp1 HG01515.hp1 HG01516.hp1 HG01517.hp1 HG01884.hp1 HG01884.hp2 HG01891.hp1 HG01891.hp2 HG01934.hp1 HG01981.hp1 HG02055.hp2 HG02071.hp2 HG02074.hp2 HG02080.hp1 HG02109.hp1 HG02109.hp2 HG02145.hp1 HG02145.hp2 HG02258.hp1 HG02258.hp2 HG02280.hp1 HG02280.hp2 HG02293.hp2 HG02451.hp1 HG02451.hp2 HG02486.hp1 HG02486.hp2 HG02559.hp1 HG02559.hp2 HG02572.hp2 HG02615.hp1 HG02647.hp1 HG02683.hp2 HG02717.hp1 HG02717.hp2 HG02809.hp1 HG02809.hp2 HG02818.hp1 HG02818.hp2 HG02886.hp1 HG02886.hp2 HG02895.hp1 HG02896.hp1 HG02896.hp2 HG02897.hp1 HG02897.hp2 HG02922.hp1 HG02922.hp2 HG02965.hp1 HG02970.hp2 HG02976.hp2 HG03098.hp2 HG03130.hp2 HG03139.hp1 HG03139.hp2 HG03209.hp2 HG03225.hp2 HG03239.hp1 HG03453.hp2 HG03471.hp1 HG03471.hp2 HG03486.hp1 HG03486.hp2 HG03490.hp2 HG03516.hp1 HG03516.hp2 HG03540.hp1 HG03540.hp2 HG03579.hp1 HG03579.hp2 HG03654.hp2 HG03688.hp1 HG04204.hp2 HG06807.hp1 HG06807.hp2 NA18522.hp2 NA18612.hp2 NA18906.hp1 NA18942.hp2 NA18951.hp2 NA18953.hp2 NA18954.hp2 NA18956.hp2 NA18961.hp2 NA18971.hp1 NA18973.hp2 NA18980.hp1 NA19007.hp2 NA19030.hp1 NA19030.hp2 NA19043.hp1 NA19056.hp1 NA19057.hp1 NA19068.hp2 NA19240.hp1 NA19240.hp2 NA20129.hp2 NA20300.hp2 NA20752.hp1 NA20805.hp1 NA20905.hp1 NA21309.hp2	intron_variant	MODIFIER	c.1958-288T>C c.1958-288T>C	SPATA20	ENSG00000006282.22	transcript	ENST00000006658.11	protein_coding	14/16		chr17	50553963
chr17:50554051	G G	A A	1	a0002c0002t0001g0029 a0002c0002t0001g0029	2	HG02895.hp1 HG02897.hp1 HG02895.hp1 HG02897.hp1	intron_variant	MODIFIER	c.1958-200G>A c.1958-200G>A	SPATA20	ENSG00000006282.22	transcript	ENST00000006658.11	protein_coding	14/16		chr17	50554051
chr17:50554158	T T	A A	1	a0002c0025t0001g0063 a0002c0025t0001g0063	1	NA20752.hp1 NA20752.hp1	intron_variant	MODIFIER	c.1958-93T>A c.1958-93T>A	SPATA20	ENSG00000006282.22	transcript	ENST00000006658.11	protein_coding	14/16		chr17	50554158
chr17:50554179	C C	G G	2	a0002c0002t0001g0070 a0011c0024t0001g0068 a0002c0002t0001g0070 a0011c0024t0001g0068	2	HG02451.hp2 HG03540.hp1 HG02451.hp2 HG03540.hp1	intron_variant	MODIFIER	c.1958-72C>G c.1958-72C>G	SPATA20	ENSG00000006282.22	transcript	ENST00000006658.11	protein_coding	14/16		chr17	50554179
chr17:50554183	C C	G G	1	a0001c0001t0001g0043 a0001c0001t0001g0043	1	HG00597.hp2 HG00597.hp2	intron_variant	MODIFIER	c.1958-68C>G c.1958-68C>G	SPATA20	ENSG00000006282.22	transcript	ENST00000006658.11	protein_coding	14/16		chr17	50554183
chr17:50554246	T T	C C	32	a0002c0002t0001g0002 a0002c0002t0001g0008 a0002c0002t0001g0016 others(29): Show a0002c0002t0001g0002 a0002c0002t0001g0008 a0002c0002t0001g0016 a0002c0002t0001g0019 a0002c0002t0001g0020 a0002c0002t0001g0021 a0002c0002t0001g0029 a0002c0002t0001g0030 a0002c0002t0001g0031 a0002c0002t0001g0056 a0002c0002t0001g0057 a0002c0002t0001g0058 a0002c0002t0001g0062 a0002c0002t0001g0064 a0002c0002t0001g0065 a0002c0002t0001g0066 a0002c0002t0001g0069 a0002c0002t0001g0070 a0002c0002t0001g0071 a0002c0002t0001g0072 a0002c0002t0001g0073 a0002c0002t0001g0074 a0002c0008t0001g0022 a0002c0025t0001g0063 a0004c0004t0002g0004 a0004c0004t0002g0012 a0004c0004t0002g0015 a0004c0004t0002g0059 a0004c0004t0002g0061 a0004c0020t0002g0004 a0010c0022t0001g0002 a0011c0024t0001g0068	120	HG00099.hp2 HG00642.hp1 HG00642.hp2 others(117): Show HG00099.hp2 HG00642.hp1 HG00642.hp2 HG00738.hp2 HG00741.hp1 HG01069.hp2 HG01070.hp1 HG01071.hp1 HG01074.hp2 HG01099.hp1 HG01106.hp2 HG01168.hp2 HG01169.hp2 HG01175.hp1 HG01192.hp1 HG01243.hp1 HG01243.hp2 HG01255.hp1 HG01261.hp1 HG01346.hp1 HG01515.hp1 HG01516.hp1 HG01517.hp1 HG01884.hp1 HG01884.hp2 HG01891.hp1 HG01891.hp2 HG01934.hp1 HG01981.hp1 HG02055.hp2 HG02071.hp2 HG02074.hp2 HG02080.hp1 HG02109.hp1 HG02109.hp2 HG02145.hp1 HG02145.hp2 HG02258.hp1 HG02258.hp2 HG02280.hp1 HG02280.hp2 HG02293.hp2 HG02451.hp1 HG02451.hp2 HG02486.hp1 HG02486.hp2 HG02559.hp1 HG02559.hp2 HG02572.hp2 HG02615.hp1 HG02647.hp1 HG02683.hp2 HG02717.hp1 HG02717.hp2 HG02809.hp1 HG02809.hp2 HG02818.hp1 HG02818.hp2 HG02886.hp2 HG02895.hp1 HG02896.hp1 HG02896.hp2 HG02897.hp1 HG02897.hp2 HG02922.hp1 HG02922.hp2 HG02965.hp1 HG02970.hp2 HG02976.hp2 HG03098.hp2 HG03130.hp2 HG03139.hp1 HG03139.hp2 HG03209.hp2 HG03225.hp2 HG03239.hp1 HG03453.hp2 HG03471.hp1 HG03471.hp2 HG03486.hp1 HG03486.hp2 HG03490.hp2 HG03516.hp1 HG03516.hp2 HG03540.hp1 HG03540.hp2 HG03579.hp1 HG03579.hp2 HG03654.hp2 HG03688.hp1 HG04204.hp2 HG06807.hp1 HG06807.hp2 NA18522.hp2 NA18612.hp2 NA18906.hp1 NA18942.hp2 NA18951.hp2 NA18953.hp2 NA18954.hp2 NA18956.hp2 NA18961.hp2 NA18971.hp1 NA18973.hp2 NA18980.hp1 NA19007.hp2 NA19030.hp1 NA19030.hp2 NA19043.hp1 NA19056.hp1 NA19057.hp1 NA19068.hp2 NA19240.hp1 NA19240.hp2 NA20129.hp2 NA20300.hp2 NA20752.hp1 NA20805.hp1 NA20905.hp1 NA21309.hp2	splice_region_variant&intron_variant	LOW	c.1958-5T>C c.1958-5T>C	SPATA20	ENSG00000006282.22	transcript	ENST00000006658.11	protein_coding	14/16		chr17	50554246
chr17:50554457	G G	A A	1	a0002c0002t0001g0064 a0002c0002t0001g0064	1	NA20805.hp1 NA20805.hp1	splice_region_variant&intron_variant	LOW	c.2157+7G>A c.2157+7G>A	SPATA20	ENSG00000006282.22	transcript	ENST00000006658.11	protein_coding	15/16		chr17	50554457
chr17:50554483	G G	A A	2	a0001c0001t0001g0052 a0002c0002t0001g0021 a0001c0001t0001g0052 a0002c0002t0001g0021	4	HG02258.hp2 HG02630.hp1 HG02818.hp2 others(1): Show HG02258.hp2 HG02630.hp1 HG02818.hp2 HG03579.hp2	intron_variant	MODIFIER	c.2157+33G>A c.2157+33G>A	SPATA20	ENSG00000006282.22	transcript	ENST00000006658.11	protein_coding	15/16		chr17	50554483
chr17:50554496	G G	A A	27	a0002c0002t0001g0002 a0002c0002t0001g0008 a0002c0002t0001g0016 others(24): Show a0002c0002t0001g0002 a0002c0002t0001g0008 a0002c0002t0001g0016 a0002c0002t0001g0019 a0002c0002t0001g0020 a0002c0002t0001g0021 a0002c0002t0001g0029 a0002c0002t0001g0030 a0002c0002t0001g0031 a0002c0002t0001g0056 a0002c0002t0001g0057 a0002c0002t0001g0058 a0002c0002t0001g0062 a0002c0002t0001g0064 a0002c0002t0001g0065 a0002c0002t0001g0066 a0002c0002t0001g0067 a0002c0002t0001g0069 a0002c0002t0001g0070 a0002c0002t0001g0071 a0002c0002t0001g0072 a0002c0002t0001g0073 a0002c0002t0001g0074 a0002c0008t0001g0022 a0002c0025t0001g0063 a0010c0022t0001g0002 a0011c0024t0001g0068	99	HG00099.hp2 HG00642.hp1 HG00642.hp2 others(96): Show HG00099.hp2 HG00642.hp1 HG00642.hp2 HG00738.hp2 HG00741.hp1 HG01069.hp2 HG01071.hp1 HG01074.hp2 HG01099.hp1 HG01106.hp2 HG01168.hp2 HG01169.hp2 HG01175.hp1 HG01243.hp2 HG01255.hp1 HG01515.hp1 HG01517.hp1 HG01884.hp1 HG01884.hp2 HG01891.hp1 HG01934.hp1 HG01981.hp1 HG02055.hp2 HG02074.hp2 HG02080.hp1 HG02109.hp1 HG02109.hp2 HG02145.hp1 HG02258.hp1 HG02258.hp2 HG02280.hp1 HG02280.hp2 HG02451.hp1 HG02451.hp2 HG02486.hp1 HG02486.hp2 HG02559.hp1 HG02559.hp2 HG02615.hp1 HG02647.hp1 HG02683.hp2 HG02717.hp1 HG02809.hp1 HG02809.hp2 HG02818.hp2 HG02886.hp1 HG02886.hp2 HG02895.hp1 HG02896.hp1 HG02896.hp2 HG02897.hp1 HG02897.hp2 HG02922.hp1 HG02922.hp2 HG02965.hp1 HG02970.hp2 HG02976.hp2 HG03098.hp2 HG03139.hp1 HG03139.hp2 HG03209.hp2 HG03225.hp2 HG03239.hp1 HG03471.hp1 HG03471.hp2 HG03486.hp1 HG03486.hp2 HG03490.hp2 HG03516.hp1 HG03516.hp2 HG03540.hp1 HG03579.hp1 HG03579.hp2 HG03654.hp2 HG04204.hp2 HG06807.hp1 HG06807.hp2 NA18522.hp2 NA18906.hp1 NA18942.hp2 NA18953.hp2 NA18954.hp2 NA18956.hp2 NA18961.hp2 NA18971.hp1 NA19007.hp2 NA19030.hp1 NA19030.hp2 NA19043.hp1 NA19056.hp1 NA19057.hp1 NA19068.hp2 NA19240.hp1 NA19240.hp2 NA20129.hp2 NA20752.hp1 NA20805.hp1 NA20905.hp1 NA21309.hp2	intron_variant	MODIFIER	c.2157+46G>A c.2157+46G>A	SPATA20	ENSG00000006282.22	transcript	ENST00000006658.11	protein_coding	15/16		chr17	50554496
chr17:50554578	C C	G G	1	a0001c0001t0001g0027 a0001c0001t0001g0027	2	HG02615.hp2 HG03225.hp1 HG02615.hp2 HG03225.hp1	intron_variant	MODIFIER	c.2157+128C>G c.2157+128C>G	SPATA20	ENSG00000006282.22	transcript	ENST00000006658.11	protein_coding	15/16		chr17	50554578
chr17:50554605	G G	A A	1	a0004c0004t0002g0059 a0004c0004t0002g0059	1	HG02572.hp2 HG02572.hp2	intron_variant	MODIFIER	c.2157+155G>A c.2157+155G>A	SPATA20	ENSG00000006282.22	transcript	ENST00000006658.11	protein_coding	15/16		chr17	50554605
chr17:50554640	C C	T T	1	a0001c0001t0001g0024 a0001c0001t0001g0024	2	HG02622.hp2 HG02970.hp1 HG02622.hp2 HG02970.hp1	intron_variant	MODIFIER	c.2157+190C>T c.2157+190C>T	SPATA20	ENSG00000006282.22	transcript	ENST00000006658.11	protein_coding	15/16		chr17	50554640
chr17:50554834	G G	A A	1	a0017c0019t0001g0053 a0017c0019t0001g0053	1	HG02572.hp1 HG02572.hp1	intron_variant	MODIFIER	c.2157+384G>A c.2157+384G>A	SPATA20	ENSG00000006282.22	transcript	ENST00000006658.11	protein_coding	15/16		chr17	50554834
chr17:50554856	T T	C C	2	a0001c0001t0001g0039 a0001c0001t0001g0040 a0001c0001t0001g0039 a0001c0001t0001g0040	2	NA19065.hp2 NA19088.hp1 NA19065.hp2 NA19088.hp1	intron_variant	MODIFIER	c.2158-376T>C c.2158-376T>C	SPATA20	ENSG00000006282.22	transcript	ENST00000006658.11	protein_coding	15/16		chr17	50554856
chr17:50554885	C C	CTG CTG	10	a0001c0001t0001g0007 a0001c0001t0001g0045 a0001c0001t0001g0055 others(7): Show a0001c0001t0001g0007 a0001c0001t0001g0045 a0001c0001t0001g0055 a0001c0001t0003g0007 a0001c0006t0001g0046 a0001c0018t0001g0042 a0003c0003t0001g0003 a0003c0003t0001g0013 a0003c0014t0001g0013 a0008c0011t0001g0028	33	HG00323.hp2 HG00733.hp2 HG00735.hp1 others(30): Show HG00323.hp2 HG00733.hp2 HG00735.hp1 HG01123.hp2 HG01168.hp1 HG01175.hp2 HG01256.hp2 HG01258.hp1 HG01258.hp2 HG01346.hp2 HG01358.hp1 HG01361.hp1 HG01515.hp2 HG02083.hp2 HG02602.hp2 HG02647.hp2 HG02738.hp1 HG03688.hp2 HG03831.hp2 HG03942.hp1 HG04184.hp2 NA18945.hp2 NA18948.hp1 NA18952.hp1 NA18957.hp1 NA18980.hp2 NA18981.hp1 NA18993.hp1 NA18994.hp2 NA19002.hp2 NA19007.hp1 NA19082.hp1 NA20752.hp2	intron_variant	MODIFIER	c.2158-304_2158-303d others(4): Show c.2158-304_2158-303dupTG	SPATA20	ENSG00000006282.22	transcript	ENST00000006658.11	protein_coding	15/16	INFO_REALIGN_3_PRIME	chr17	50554885
chr17:50554885	C C	CTGTG CTGTG	5	a0001c0001t0001g0023 a0001c0001t0001g0024 a0001c0001t0001g0027 others(2): Show a0001c0001t0001g0023 a0001c0001t0001g0024 a0001c0001t0001g0027 a0003c0003t0001g0026 a0003c0003t0001g0048	9	HG01106.hp1 HG01358.hp2 HG02615.hp2 others(6): Show HG01106.hp1 HG01358.hp2 HG02615.hp2 HG02622.hp2 HG02738.hp2 HG02970.hp1 HG03225.hp1 HG03490.hp1 NA18945.hp1	intron_variant	MODIFIER	c.2158-306_2158-303d others(6): Show c.2158-306_2158-303dupTGTG	SPATA20	ENSG00000006282.22	transcript	ENST00000006658.11	protein_coding	15/16	INFO_REALIGN_3_PRIME	chr17	50554885
chr17:50554885	CTG CTG	C C	7	a0001c0001t0001g0010 a0001c0001t0001g0037 a0001c0001t0001g0044 others(4): Show a0001c0001t0001g0010 a0001c0001t0001g0037 a0001c0001t0001g0044 a0001c0001t0001g0049 a0001c0001t0001g0079 a0003c0003t0001g0014 a0003c0003t0001g0050	15	HG00673.hp2 HG00735.hp2 HG00741.hp2 others(12): Show HG00673.hp2 HG00735.hp2 HG00741.hp2 HG01167.hp1 HG03017.hp2 HG03209.hp1 HG03704.hp1 HG03927.hp2 HG04199.hp1 HG04199.hp2 HG04204.hp1 NA18943.hp2 NA18952.hp2 NA18963.hp2 NA18973.hp1	intron_variant	MODIFIER	c.2158-304_2158-303d others(4): Show c.2158-304_2158-303delTG	SPATA20	ENSG00000006282.22	transcript	ENST00000006658.11	protein_coding	15/16	INFO_REALIGN_3_PRIME	chr17	50554885
chr17:50554885	CTGTG CTGTG	C C	9	a0001c0001t0001g0006 a0001c0001t0001g0039 a0001c0001t0001g0054 others(6): Show a0001c0001t0001g0006 a0001c0001t0001g0039 a0001c0001t0001g0054 a0001c0006t0001g0035 a0001c0016t0001g0060 a0005c0005t0001g0018 a0005c0005t0001g0078 a0012c0023t0001g0018 a0014c0013t0001g0006	17	HG00099.hp1 HG00140.hp1 HG00280.hp1 others(14): Show HG00099.hp1 HG00140.hp1 HG00280.hp1 HG00733.hp1 HG01192.hp2 HG01516.hp2 HG01517.hp2 HG01952.hp1 HG02027.hp2 HG02080.hp2 HG02602.hp1 HG02630.hp2 HG02965.hp2 HG03710.hp1 HG04115.hp2 NA18977.hp2 NA19065.hp2	intron_variant	MODIFIER	c.2158-306_2158-303d others(6): Show c.2158-306_2158-303delTGTG	SPATA20	ENSG00000006282.22	transcript	ENST00000006658.11	protein_coding	15/16	INFO_REALIGN_3_PRIME	chr17	50554885
chr17:50554885	CTGTGTG CTGTGTG	C C	4	a0001c0001t0001g0036 a0005c0005t0001g0005 a0006c0009t0001g0005 others(1): Show a0001c0001t0001g0036 a0005c0005t0001g0005 a0006c0009t0001g0005 a0016c0015t0001g0077	11	HG01074.hp1 HG01123.hp1 HG01261.hp2 others(8): Show HG01074.hp1 HG01123.hp1 HG01261.hp2 HG02735.hp2 HG03453.hp1 HG03654.hp1 HG04115.hp1 NA18612.hp1 NA19009.hp2 NA19087.hp2 NA21309.hp1	intron_variant	MODIFIER	c.2158-308_2158-303d others(8): Show c.2158-308_2158-303delTGTGTG	SPATA20	ENSG00000006282.22	transcript	ENST00000006658.11	protein_coding	15/16	INFO_REALIGN_3_PRIME	chr17	50554885
chr17:50554885	CTGTGTGT others(1): Show CTGTGTGTG	C C	3	a0001c0001t0001g0017 a0007c0007t0001g0017 a0017c0019t0001g0053 a0001c0001t0001g0017 a0007c0007t0001g0017 a0017c0019t0001g0053	5	HG01167.hp2 HG01169.hp1 HG02572.hp1 others(2): Show HG01167.hp2 HG01169.hp1 HG02572.hp1 HG02895.hp2 HG03098.hp1	intron_variant	MODIFIER	c.2158-310_2158-303d others(10): Show c.2158-310_2158-303delTGTGTGTG	SPATA20	ENSG00000006282.22	transcript	ENST00000006658.11	protein_coding	15/16	INFO_REALIGN_3_PRIME	chr17	50554885
chr17:50554885	CTGTGTGT others(3): Show CTGTGTGTGTG	C C	3	a0001c0001t0001g0041 a0001c0001t0001g0076 a0003c0003t0001g0025 a0001c0001t0001g0041 a0001c0001t0001g0076 a0003c0003t0001g0025	4	HG00280.hp2 HG03017.hp1 HG03130.hp1 others(1): Show HG00280.hp2 HG03017.hp1 HG03130.hp1 HG03710.hp2	intron_variant	MODIFIER	c.2158-312_2158-303d others(12): Show c.2158-312_2158-303delTGTGTGTGTG	SPATA20	ENSG00000006282.22	transcript	ENST00000006658.11	protein_coding	15/16	INFO_REALIGN_3_PRIME	chr17	50554885
chr17:50554885	CTGTGTGT others(5): Show CTGTGTGTGTGTG	C C	2	a0001c0001t0001g0052 a0001c0001t0001g0075 a0001c0001t0001g0052 a0001c0001t0001g0075	2	HG02630.hp1 HG02976.hp1 HG02630.hp1 HG02976.hp1	intron_variant	MODIFIER	c.2158-314_2158-303d others(14): Show c.2158-314_2158-303delTGTGTGTGTGTG	SPATA20	ENSG00000006282.22	transcript	ENST00000006658.11	protein_coding	15/16	INFO_REALIGN_3_PRIME	chr17	50554885
chr17:50554885	CTGTGTGT others(13): Show CTGTGTGTGTGTGTGTGTGTG	C C	2	a0002c0008t0001g0022 a0002c0025t0001g0063 a0002c0008t0001g0022 a0002c0025t0001g0063	4	NA18953.hp2 NA19057.hp1 NA19068.hp2 others(1): Show NA18953.hp2 NA19057.hp1 NA19068.hp2 NA20752.hp1	intron_variant	MODIFIER	c.2158-322_2158-303d others(22): Show c.2158-322_2158-303delTGTGTGTGTGTGTGTGTGTG	SPATA20	ENSG00000006282.22	transcript	ENST00000006658.11	protein_coding	15/16	INFO_REALIGN_3_PRIME	chr17	50554885
chr17:50554885	CTGTGTGT others(15): Show CTGTGTGTGTGTGTGTGTGTGTG	C C	31	a0002c0002t0001g0002 a0002c0002t0001g0008 a0002c0002t0001g0016 others(28): Show a0002c0002t0001g0002 a0002c0002t0001g0008 a0002c0002t0001g0016 a0002c0002t0001g0019 a0002c0002t0001g0020 a0002c0002t0001g0021 a0002c0002t0001g0029 a0002c0002t0001g0030 a0002c0002t0001g0031 a0002c0002t0001g0056 a0002c0002t0001g0057 a0002c0002t0001g0058 a0002c0002t0001g0062 a0002c0002t0001g0064 a0002c0002t0001g0065 a0002c0002t0001g0066 a0002c0002t0001g0067 a0002c0002t0001g0069 a0002c0002t0001g0070 a0002c0002t0001g0071 a0002c0002t0001g0072 a0002c0002t0001g0073 a0002c0002t0001g0074 a0004c0004t0002g0004 a0004c0004t0002g0012 a0004c0004t0002g0015 a0004c0004t0002g0059 a0004c0004t0002g0061 a0004c0020t0002g0004 a0010c0022t0001g0002 a0011c0024t0001g0068	117	HG00099.hp2 HG00642.hp1 HG00642.hp2 others(114): Show HG00099.hp2 HG00642.hp1 HG00642.hp2 HG00738.hp2 HG00741.hp1 HG01069.hp2 HG01070.hp1 HG01071.hp1 HG01074.hp2 HG01099.hp1 HG01106.hp2 HG01168.hp2 HG01169.hp2 HG01175.hp1 HG01192.hp1 HG01243.hp1 HG01243.hp2 HG01255.hp1 HG01261.hp1 HG01346.hp1 HG01515.hp1 HG01516.hp1 HG01517.hp1 HG01884.hp1 HG01884.hp2 HG01891.hp1 HG01891.hp2 HG01934.hp1 HG01981.hp1 HG02055.hp2 HG02071.hp2 HG02074.hp2 HG02080.hp1 HG02109.hp1 HG02109.hp2 HG02145.hp1 HG02145.hp2 HG02258.hp1 HG02258.hp2 HG02280.hp1 HG02280.hp2 HG02293.hp2 HG02451.hp1 HG02451.hp2 HG02486.hp1 HG02486.hp2 HG02559.hp1 HG02559.hp2 HG02572.hp2 HG02615.hp1 HG02647.hp1 HG02683.hp2 HG02717.hp1 HG02717.hp2 HG02809.hp1 HG02809.hp2 HG02818.hp1 HG02818.hp2 HG02886.hp1 HG02886.hp2 HG02895.hp1 HG02896.hp1 HG02896.hp2 HG02897.hp1 HG02897.hp2 HG02922.hp1 HG02922.hp2 HG02965.hp1 HG02970.hp2 HG02976.hp2 HG03098.hp2 HG03130.hp2 HG03139.hp1 HG03139.hp2 HG03209.hp2 HG03225.hp2 HG03239.hp1 HG03453.hp2 HG03471.hp1 HG03471.hp2 HG03486.hp1 HG03486.hp2 HG03490.hp2 HG03516.hp1 HG03516.hp2 HG03540.hp1 HG03540.hp2 HG03579.hp1 HG03579.hp2 HG03654.hp2 HG03688.hp1 HG04204.hp2 HG06807.hp1 HG06807.hp2 NA18522.hp2 NA18612.hp2 NA18906.hp1 NA18942.hp2 NA18951.hp2 NA18954.hp2 NA18956.hp2 NA18961.hp2 NA18971.hp1 NA18973.hp2 NA18980.hp1 NA19007.hp2 NA19030.hp1 NA19030.hp2 NA19043.hp1 NA19056.hp1 NA19240.hp1 NA19240.hp2 NA20129.hp2 NA20300.hp2 NA20805.hp1 NA20905.hp1 NA21309.hp2	intron_variant	MODIFIER	c.2158-324_2158-303d others(24): Show c.2158-324_2158-303delTGTGTGTGTGTGTGTGTGTGTG	SPATA20	ENSG00000006282.22	transcript	ENST00000006658.11	protein_coding	15/16	INFO_REALIGN_3_PRIME	chr17	50554885
chr17:50554949	A A	G G	36	a0001c0001t0001g0079 a0001c0001t0001g0080 a0001c0016t0001g0060 others(33): Show a0001c0001t0001g0079 a0001c0001t0001g0080 a0001c0016t0001g0060 a0002c0002t0001g0002 a0002c0002t0001g0008 a0002c0002t0001g0016 a0002c0002t0001g0019 a0002c0002t0001g0020 a0002c0002t0001g0021 a0002c0002t0001g0029 a0002c0002t0001g0030 a0002c0002t0001g0031 a0002c0002t0001g0056 a0002c0002t0001g0057 a0002c0002t0001g0058 a0002c0002t0001g0062 a0002c0002t0001g0064 a0002c0002t0001g0065 a0002c0002t0001g0066 a0002c0002t0001g0067 a0002c0002t0001g0069 a0002c0002t0001g0070 a0002c0002t0001g0071 a0002c0002t0001g0072 a0002c0002t0001g0073 a0002c0002t0001g0074 a0002c0008t0001g0022 a0002c0025t0001g0063 a0004c0004t0002g0004 a0004c0004t0002g0012 a0004c0004t0002g0015 a0004c0004t0002g0059 a0004c0004t0002g0061 a0004c0020t0002g0004 a0010c0022t0001g0002 a0011c0024t0001g0068	124	HG00099.hp2 HG00642.hp1 HG00642.hp2 others(121): Show HG00099.hp2 HG00642.hp1 HG00642.hp2 HG00738.hp2 HG00741.hp1 HG01069.hp2 HG01070.hp1 HG01071.hp1 HG01074.hp2 HG01099.hp1 HG01106.hp2 HG01168.hp2 HG01169.hp2 HG01175.hp1 HG01192.hp1 HG01243.hp1 HG01243.hp2 HG01255.hp1 HG01261.hp1 HG01346.hp1 HG01515.hp1 HG01516.hp1 HG01517.hp1 HG01884.hp1 HG01884.hp2 HG01891.hp1 HG01891.hp2 HG01934.hp1 HG01981.hp1 HG02055.hp2 HG02071.hp2 HG02074.hp2 HG02080.hp1 HG02109.hp1 HG02109.hp2 HG02145.hp1 HG02145.hp2 HG02258.hp1 HG02258.hp2 HG02280.hp1 HG02280.hp2 HG02293.hp2 HG02451.hp1 HG02451.hp2 HG02486.hp1 HG02486.hp2 HG02559.hp1 HG02559.hp2 HG02572.hp2 HG02615.hp1 HG02647.hp1 HG02683.hp2 HG02717.hp1 HG02717.hp2 HG02809.hp1 HG02809.hp2 HG02818.hp1 HG02818.hp2 HG02886.hp1 HG02886.hp2 HG02895.hp1 HG02896.hp1 HG02896.hp2 HG02897.hp1 HG02897.hp2 HG02922.hp1 HG02922.hp2 HG02965.hp1 HG02965.hp2 HG02970.hp2 HG02976.hp2 HG03098.hp2 HG03130.hp2 HG03139.hp1 HG03139.hp2 HG03209.hp1 HG03209.hp2 HG03225.hp2 HG03239.hp1 HG03453.hp2 HG03471.hp1 HG03471.hp2 HG03486.hp1 HG03486.hp2 HG03490.hp2 HG03516.hp1 HG03516.hp2 HG03540.hp1 HG03540.hp2 HG03579.hp1 HG03579.hp2 HG03654.hp2 HG03688.hp1 HG04204.hp2 HG06807.hp1 HG06807.hp2 NA18522.hp2 NA18612.hp2 NA18906.hp1 NA18942.hp2 NA18951.hp2 NA18953.hp2 NA18954.hp2 NA18956.hp2 NA18961.hp2 NA18971.hp1 NA18973.hp2 NA18980.hp1 NA19007.hp2 NA19030.hp1 NA19030.hp2 NA19043.hp1 NA19056.hp1 NA19057.hp1 NA19068.hp2 NA19240.hp1 NA19240.hp2 NA20129.hp1 NA20129.hp2 NA20300.hp2 NA20752.hp1 NA20805.hp1 NA20905.hp1 NA21309.hp2	intron_variant	MODIFIER	c.2158-283A>G c.2158-283A>G	SPATA20	ENSG00000006282.22	transcript	ENST00000006658.11	protein_coding	15/16		chr17	50554949
chr17:50554956	C C	A A	1	a0002c0002t0001g0065 a0002c0002t0001g0065	1	HG02970.hp2 HG02970.hp2	intron_variant	MODIFIER	c.2158-276C>A c.2158-276C>A	SPATA20	ENSG00000006282.22	transcript	ENST00000006658.11	protein_coding	15/16		chr17	50554956
chr17:50554971	G G	A A	1	a0002c0008t0001g0022 a0002c0008t0001g0022	3	NA18953.hp2 NA19057.hp1 NA19068.hp2 NA18953.hp2 NA19057.hp1 NA19068.hp2	intron_variant	MODIFIER	c.2158-261G>A c.2158-261G>A	SPATA20	ENSG00000006282.22	transcript	ENST00000006658.11	protein_coding	15/16		chr17	50554971
chr17:50554993	C C	T T	6	a0004c0004t0002g0004 a0004c0004t0002g0012 a0004c0004t0002g0015 others(3): Show a0004c0004t0002g0004 a0004c0004t0002g0012 a0004c0004t0002g0015 a0004c0004t0002g0059 a0004c0004t0002g0061 a0004c0020t0002g0004	22	HG01070.hp1 HG01192.hp1 HG01243.hp1 others(19): Show HG01070.hp1 HG01192.hp1 HG01243.hp1 HG01261.hp1 HG01346.hp1 HG01516.hp1 HG01891.hp2 HG02071.hp2 HG02145.hp2 HG02293.hp2 HG02572.hp2 HG02717.hp2 HG02818.hp1 HG03130.hp2 HG03453.hp2 HG03540.hp2 HG03688.hp1 NA18612.hp2 NA18951.hp2 NA18973.hp2 NA18980.hp1 NA20300.hp2	intron_variant	MODIFIER	c.2158-239C>T c.2158-239C>T	SPATA20	ENSG00000006282.22	transcript	ENST00000006658.11	protein_coding	15/16		chr17	50554993
chr17:50555025	T T	C C	3	a0001c0001t0001g0079 a0001c0001t0001g0080 a0001c0016t0001g0060 a0001c0001t0001g0079 a0001c0001t0001g0080 a0001c0016t0001g0060	3	HG02965.hp2 HG03209.hp1 NA20129.hp1 HG02965.hp2 HG03209.hp1 NA20129.hp1	intron_variant	MODIFIER	c.2158-207T>C c.2158-207T>C	SPATA20	ENSG00000006282.22	transcript	ENST00000006658.11	protein_coding	15/16		chr17	50555025
chr17:50555040	G G	A A	27	a0002c0002t0001g0002 a0002c0002t0001g0008 a0002c0002t0001g0016 others(24): Show a0002c0002t0001g0002 a0002c0002t0001g0008 a0002c0002t0001g0016 a0002c0002t0001g0019 a0002c0002t0001g0020 a0002c0002t0001g0021 a0002c0002t0001g0029 a0002c0002t0001g0030 a0002c0002t0001g0031 a0002c0002t0001g0056 a0002c0002t0001g0057 a0002c0002t0001g0058 a0002c0002t0001g0062 a0002c0002t0001g0064 a0002c0002t0001g0065 a0002c0002t0001g0066 a0002c0002t0001g0067 a0002c0002t0001g0069 a0002c0002t0001g0070 a0002c0002t0001g0071 a0002c0002t0001g0072 a0002c0002t0001g0073 a0002c0002t0001g0074 a0002c0008t0001g0022 a0002c0025t0001g0063 a0010c0022t0001g0002 a0011c0024t0001g0068	99	HG00099.hp2 HG00642.hp1 HG00642.hp2 others(96): Show HG00099.hp2 HG00642.hp1 HG00642.hp2 HG00738.hp2 HG00741.hp1 HG01069.hp2 HG01071.hp1 HG01074.hp2 HG01099.hp1 HG01106.hp2 HG01168.hp2 HG01169.hp2 HG01175.hp1 HG01243.hp2 HG01255.hp1 HG01515.hp1 HG01517.hp1 HG01884.hp1 HG01884.hp2 HG01891.hp1 HG01934.hp1 HG01981.hp1 HG02055.hp2 HG02074.hp2 HG02080.hp1 HG02109.hp1 HG02109.hp2 HG02145.hp1 HG02258.hp1 HG02258.hp2 HG02280.hp1 HG02280.hp2 HG02451.hp1 HG02451.hp2 HG02486.hp1 HG02486.hp2 HG02559.hp1 HG02559.hp2 HG02615.hp1 HG02647.hp1 HG02683.hp2 HG02717.hp1 HG02809.hp1 HG02809.hp2 HG02818.hp2 HG02886.hp1 HG02886.hp2 HG02895.hp1 HG02896.hp1 HG02896.hp2 HG02897.hp1 HG02897.hp2 HG02922.hp1 HG02922.hp2 HG02965.hp1 HG02970.hp2 HG02976.hp2 HG03098.hp2 HG03139.hp1 HG03139.hp2 HG03209.hp2 HG03225.hp2 HG03239.hp1 HG03471.hp1 HG03471.hp2 HG03486.hp1 HG03486.hp2 HG03490.hp2 HG03516.hp1 HG03516.hp2 HG03540.hp1 HG03579.hp1 HG03579.hp2 HG03654.hp2 HG04204.hp2 HG06807.hp1 HG06807.hp2 NA18522.hp2 NA18906.hp1 NA18942.hp2 NA18953.hp2 NA18954.hp2 NA18956.hp2 NA18961.hp2 NA18971.hp1 NA19007.hp2 NA19030.hp1 NA19030.hp2 NA19043.hp1 NA19056.hp1 NA19057.hp1 NA19068.hp2 NA19240.hp1 NA19240.hp2 NA20129.hp2 NA20752.hp1 NA20805.hp1 NA20905.hp1 NA21309.hp2	intron_variant	MODIFIER	c.2158-192G>A c.2158-192G>A	SPATA20	ENSG00000006282.22	transcript	ENST00000006658.11	protein_coding	15/16		chr17	50555040
chr17:50555124	T T	C C	1	a0003c0003t0001g0050 a0003c0003t0001g0050	1	HG00735.hp2 HG00735.hp2	intron_variant	MODIFIER	c.2158-108T>C c.2158-108T>C	SPATA20	ENSG00000006282.22	transcript	ENST00000006658.11	protein_coding	15/16		chr17	50555124
chr17:50555376	C C	T T	1	a0002c0002t0001g0066 a0002c0002t0001g0066	1	HG02615.hp1 HG02615.hp1	intron_variant	MODIFIER	c.2238+64C>T c.2238+64C>T	SPATA20	ENSG00000006282.22	transcript	ENST00000006658.11	protein_coding	16/16		chr17	50555376
chr17:50555425	G G	A A	1	a0001c0018t0001g0042 a0001c0018t0001g0042	1	HG01168.hp1 HG01168.hp1	intron_variant	MODIFIER	c.2239-67G>A c.2239-67G>A	SPATA20	ENSG00000006282.22	transcript	ENST00000006658.11	protein_coding	16/16		chr17	50555425
chr17:50555453	C C	A A	1	a0002c0002t0001g0072 a0002c0002t0001g0072	1	HG02976.hp2 HG02976.hp2	intron_variant	MODIFIER	c.2239-39C>A c.2239-39C>A	SPATA20	ENSG00000006282.22	transcript	ENST00000006658.11	protein_coding	16/16		chr17	50555453

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🧬 JoGo Online Haplotype Explorer SPATA20_chr17_50542174_50560852

JoGo Local Haplotype Explorer (on iGV) SPATA20_chr17_50542174_50560852

Translation Multiple Alignment View

🧬 Gene Summary

AAmino acid(protein) Level Haplotype Info (Total: 18)

CCoding Level Haplotype Info (Total: 26)

TTranscript Level Haplotype Info (Total: 3)

GGenebody Level Haplotype Info (Total: 80)

A C AC Level (Amino Acid + Coding) Haplotype Info (Total: 26)

A C T ACT Level (Amino Acid + Coding + Transcript) Haplotype Info (Total: 27)

A C T G ACTG Level (Amino Acid + Coding + Transcript + Genebody) Haplotype Info (Total: 93)

Haplotype Details by Sample (Haploid Level) (Total: 334)

AAmino acid(protein) Level Haplotype Related Variants (Effect to Protein Coding Variants) (Total: 16)

CCoding Level Variants (Synonymous Mutations) (Total: 10)

TTranscript Level Haplotype Variants (5'UTR+3'UTR) (Total: 2)

GGenebody Level Haplotype Variants (Intron) (Total: 94)

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Annotation (Repeats)

Annotation (SNP Array)