Search by Genic region
Multiple Alignments (by aa haplotype frequency)
Multiple Alignments (by aa haplotype similarity)
| Item | Value |
|---|---|
| geneid | 57216 |
| ensemblid | ENSG00000162738.7 |
| hgncid | 15511 |
| symbol | VANGL2 |
| name | VANGL planar cell polarity protein 2 |
| refseq_nuc | NM_020335.3 |
| refseq_prot | NP_065068.1 |
| ensembl_nuc | ENST00000368061.3 |
| ensembl_prot | ENSP00000357040.2 |
| mane_status | MANE Select |
| chr | chr1 |
| start | 160400564 |
| end | 160428670 |
| strand | + |
| ver | v1.2 |
| region | chr1:160400564-160428670 |
| region5000 | chr1:160395564-160433670 |
| regionname0 | VANGL2_chr1_160400564_160428670 |
| regionname5000 | VANGL2_chr1_160395564_160433670 |
| ahapid | grch38/chm13v2 | alen | total | AFR | AMR | EAS | EUR | SAS | JPT | regionname | genename | aa | chr | start | end |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| a0001 | 1/1 | 521 | 388 | 94 | 62 | 166 | 16 | 48 | 126 | VANGL2_chr1_160395564_160433670 | VANGL2 | MDTES others(516): Show |
chr1 | 160395564 | 160433670 |
| a0002 | 0/0 | 521 | 2 | 0 | 0 | 2 | 0 | 0 | 0 | VANGL2_chr1_160395564_160433670 | VANGL2 | MDTES others(516): Show |
chr1 | 160395564 | 160433670 |
| achapid | grch38/chm13v2 | alen | clen | total | AFR | AMR | EAS | EUR | SAS | regionname | genename | aseq | cseq | chr | start | end |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| a0001c0001 | 0/0 | 1563 | 148 | 52 | 15 | 59 | 6 | 16 | VANGL2_chr1_160395564_160433670 | VANGL2 | ATGGA others(1558): Show |
chr1 | 160395564 | 160433670 | ||
| a0001c0002 | 1/1 | 1563 | 145 | 13 | 32 | 79 | 5 | 14 | VANGL2_chr1_160395564_160433670 | VANGL2 | ATGGA others(1558): Show |
chr1 | 160395564 | 160433670 | ||
| a0001c0003 | 0/0 | 1563 | 80 | 19 | 13 | 28 | 5 | 15 | VANGL2_chr1_160395564_160433670 | VANGL2 | ATGGA others(1558): Show |
chr1 | 160395564 | 160433670 | ||
| a0001c0004 | 0/0 | 1563 | 8 | 7 | 1 | 0 | 0 | 0 | VANGL2_chr1_160395564_160433670 | VANGL2 | ATGGA others(1558): Show |
chr1 | 160395564 | 160433670 | ||
| a0001c0005 | 0/0 | 1563 | 2 | 1 | 1 | 0 | 0 | 0 | VANGL2_chr1_160395564_160433670 | VANGL2 | ATGGA others(1558): Show |
chr1 | 160395564 | 160433670 | ||
| a0001c0007 | 0/0 | 1563 | 1 | 0 | 0 | 0 | 0 | 1 | VANGL2_chr1_160395564_160433670 | VANGL2 | ATGGA others(1558): Show |
chr1 | 160395564 | 160433670 | ||
| a0001c0008 | 0/0 | 1563 | 1 | 0 | 0 | 0 | 0 | 1 | VANGL2_chr1_160395564_160433670 | VANGL2 | ATGGA others(1558): Show |
chr1 | 160395564 | 160433670 | ||
| a0001c0009 | 0/0 | 1563 | 1 | 1 | 0 | 0 | 0 | 0 | VANGL2_chr1_160395564_160433670 | VANGL2 | ATGGA others(1558): Show |
chr1 | 160395564 | 160433670 | ||
| a0001c0010 | 0/0 | 1563 | 1 | 0 | 0 | 0 | 0 | 1 | VANGL2_chr1_160395564_160433670 | VANGL2 | ATGGA others(1558): Show |
chr1 | 160395564 | 160433670 | ||
| a0001c0011 | 0/0 | 1563 | 1 | 1 | 0 | 0 | 0 | 0 | VANGL2_chr1_160395564_160433670 | VANGL2 | ATGGA others(1558): Show |
chr1 | 160395564 | 160433670 | ||
| a0002c0006 | 0/0 | 1563 | 2 | 0 | 0 | 2 | 0 | 0 | VANGL2_chr1_160395564_160433670 | VANGL2 | ATGGA others(1558): Show |
chr1 | 160395564 | 160433670 |
| acthapid | grch38chm13v2 | tlen | total | AFR | AMR | EAS | EUR | SAS | regionname | genename | tseq | chr | start | end |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| a0001c0001t0001 | 0/0 | 5355 | 39 | 16 | 1 | 21 | 1 | 0 | VANGL2_chr1_160395564_160433670 | VANGL2 | CTGCG others(5350): Show |
chr1 | 160395564 | 160433670 |
| a0001c0001t0003 | 0/0 | 5360 | 41 | 0 | 6 | 30 | 1 | 4 | VANGL2_chr1_160395564_160433670 | VANGL2 | CTGCG others(5355): Show |
chr1 | 160395564 | 160433670 |
| a0001c0001t0004 | 0/0 | 5363 | 16 | 7 | 2 | 3 | 1 | 3 | VANGL2_chr1_160395564_160433670 | VANGL2 | CTGCG others(5358): Show |
chr1 | 160395564 | 160433670 |
| a0001c0001t0005 | 0/0 | 5358 | 10 | 10 | 0 | 0 | 0 | 0 | VANGL2_chr1_160395564_160433670 | VANGL2 | CTGCG others(5353): Show |
chr1 | 160395564 | 160433670 |
| a0001c0001t0006 | 0/0 | 5360 | 9 | 1 | 4 | 2 | 0 | 2 | VANGL2_chr1_160395564_160433670 | VANGL2 | CTGCG others(5355): Show |
chr1 | 160395564 | 160433670 |
| a0001c0001t0011 | 0/0 | 5355 | 4 | 4 | 0 | 0 | 0 | 0 | VANGL2_chr1_160395564_160433670 | VANGL2 | CTGCG others(5350): Show |
chr1 | 160395564 | 160433670 |
| a0001c0001t0012 | 0/0 | 5355 | 3 | 0 | 0 | 0 | 0 | 3 | VANGL2_chr1_160395564_160433670 | VANGL2 | CTGCG others(5350): Show |
chr1 | 160395564 | 160433670 |
| a0001c0001t0016 | 0/0 | 5354 | 2 | 0 | 0 | 0 | 2 | 0 | VANGL2_chr1_160395564_160433670 | VANGL2 | CTGCG others(5349): Show |
chr1 | 160395564 | 160433670 |
| a0001c0001t0017 | 0/0 | 5360 | 2 | 0 | 0 | 0 | 0 | 2 | VANGL2_chr1_160395564_160433670 | VANGL2 | CTGCG others(5355): Show |
chr1 | 160395564 | 160433670 |
| a0001c0001t0018 | 0/0 | 5363 | 1 | 0 | 0 | 1 | 0 | 0 | VANGL2_chr1_160395564_160433670 | VANGL2 | CTGCG others(5358): Show |
chr1 | 160395564 | 160433670 |
| a0001c0001t0019 | 0/0 | 5360 | 2 | 0 | 0 | 0 | 0 | 2 | VANGL2_chr1_160395564_160433670 | VANGL2 | CTGCG others(5355): Show |
chr1 | 160395564 | 160433670 |
| a0001c0001t0020 | 0/0 | 5361 | 2 | 2 | 0 | 0 | 0 | 0 | VANGL2_chr1_160395564_160433670 | VANGL2 | CTGCG others(5356): Show |
chr1 | 160395564 | 160433670 |
| a0001c0001t0022 | 0/0 | 5355 | 1 | 1 | 0 | 0 | 0 | 0 | VANGL2_chr1_160395564_160433670 | VANGL2 | CTGCG others(5350): Show |
chr1 | 160395564 | 160433670 |
| a0001c0001t0023 | 0/0 | 5361 | 2 | 2 | 0 | 0 | 0 | 0 | VANGL2_chr1_160395564_160433670 | VANGL2 | CTGCG others(5356): Show |
chr1 | 160395564 | 160433670 |
| a0001c0001t0025 | 0/0 | 5360 | 1 | 0 | 1 | 0 | 0 | 0 | VANGL2_chr1_160395564_160433670 | VANGL2 | CTGCG others(5355): Show |
chr1 | 160395564 | 160433670 |
| a0001c0001t0026 | 0/0 | 5354 | 1 | 0 | 0 | 1 | 0 | 0 | VANGL2_chr1_160395564_160433670 | VANGL2 | CTGCG others(5349): Show |
chr1 | 160395564 | 160433670 |
| a0001c0001t0027 | 0/0 | 5358 | 1 | 0 | 0 | 1 | 0 | 0 | VANGL2_chr1_160395564_160433670 | VANGL2 | CTGCG others(5353): Show |
chr1 | 160395564 | 160433670 |
| a0001c0001t0034 | 0/0 | 5355 | 1 | 1 | 0 | 0 | 0 | 0 | VANGL2_chr1_160395564_160433670 | VANGL2 | CTGCG others(5350): Show |
chr1 | 160395564 | 160433670 |
| a0001c0001t0035 | 0/0 | 5360 | 1 | 1 | 0 | 0 | 0 | 0 | VANGL2_chr1_160395564_160433670 | VANGL2 | CTGCG others(5355): Show |
chr1 | 160395564 | 160433670 |
| a0001c0001t0036 | 0/0 | 5355 | 1 | 1 | 0 | 0 | 0 | 0 | VANGL2_chr1_160395564_160433670 | VANGL2 | CTGCG others(5350): Show |
chr1 | 160395564 | 160433670 |
| a0001c0001t0038 | 0/0 | 5355 | 1 | 1 | 0 | 0 | 0 | 0 | VANGL2_chr1_160395564_160433670 | VANGL2 | CTGCG others(5350): Show |
chr1 | 160395564 | 160433670 |
| a0001c0001t0039 | 0/0 | 5354 | 1 | 0 | 1 | 0 | 0 | 0 | VANGL2_chr1_160395564_160433670 | VANGL2 | CTGCG others(5349): Show |
chr1 | 160395564 | 160433670 |
| a0001c0001t0040 | 0/0 | 5361 | 1 | 1 | 0 | 0 | 0 | 0 | VANGL2_chr1_160395564_160433670 | VANGL2 | CTGCG others(5356): Show |
chr1 | 160395564 | 160433670 |
| a0001c0001t0041 | 0/0 | 5366 | 1 | 0 | 0 | 0 | 1 | 0 | VANGL2_chr1_160395564_160433670 | VANGL2 | CTGCG others(5361): Show |
chr1 | 160395564 | 160433670 |
| a0001c0001t0042 | 0/0 | 5367 | 1 | 1 | 0 | 0 | 0 | 0 | VANGL2_chr1_160395564_160433670 | VANGL2 | CTGCG others(5362): Show |
chr1 | 160395564 | 160433670 |
| a0001c0001t0043 | 0/0 | 5364 | 1 | 1 | 0 | 0 | 0 | 0 | VANGL2_chr1_160395564_160433670 | VANGL2 | CTGCG others(5359): Show |
chr1 | 160395564 | 160433670 |
| a0001c0001t0045 | 0/0 | 5358 | 1 | 1 | 0 | 0 | 0 | 0 | VANGL2_chr1_160395564_160433670 | VANGL2 | CTGCG others(5353): Show |
chr1 | 160395564 | 160433670 |
| a0001c0001t0049 | 0/0 | 5355 | 1 | 1 | 0 | 0 | 0 | 0 | VANGL2_chr1_160395564_160433670 | VANGL2 | CTGCG others(5350): Show |
chr1 | 160395564 | 160433670 |
| a0001c0002t0001 | 0/0 | 5355 | 10 | 8 | 1 | 1 | 0 | 0 | VANGL2_chr1_160395564_160433670 | VANGL2 | CTGCG others(5350): Show |
chr1 | 160395564 | 160433670 |
| a0001c0002t0002 | 1/0 | 5354 | 107 | 3 | 23 | 63 | 4 | 13 | VANGL2_chr1_160395564_160433670 | VANGL2 | CTGCG others(5349): Show |
chr1 | 160395564 | 160433670 |
| a0001c0002t0008 | 0/0 | 5354 | 6 | 1 | 4 | 0 | 1 | 0 | VANGL2_chr1_160395564_160433670 | VANGL2 | CTGCG others(5349): Show |
chr1 | 160395564 | 160433670 |
| a0001c0002t0009 | 0/0 | 5357 | 4 | 0 | 4 | 0 | 0 | 0 | VANGL2_chr1_160395564_160433670 | VANGL2 | CTGCG others(5352): Show |
chr1 | 160395564 | 160433670 |
| a0001c0002t0010 | 0/0 | 5362 | 6 | 0 | 0 | 6 | 0 | 0 | VANGL2_chr1_160395564_160433670 | VANGL2 | CTGCG others(5357): Show |
chr1 | 160395564 | 160433670 |
| a0001c0002t0013 | 0/0 | 5354 | 3 | 0 | 0 | 3 | 0 | 0 | VANGL2_chr1_160395564_160433670 | VANGL2 | CTGCG others(5349): Show |
chr1 | 160395564 | 160433670 |
| a0001c0002t0021 | 0/0 | 5354 | 2 | 0 | 0 | 2 | 0 | 0 | VANGL2_chr1_160395564_160433670 | VANGL2 | CTGCG others(5349): Show |
chr1 | 160395564 | 160433670 |
| a0001c0002t0024 | 0/1 | 5354 | 1 | 0 | 0 | 0 | 0 | 0 | VANGL2_chr1_160395564_160433670 | VANGL2 | CTCCG others(5349): Show |
chr1 | 160395564 | 160433670 |
| a0001c0002t0031 | 0/0 | 5354 | 1 | 0 | 0 | 1 | 0 | 0 | VANGL2_chr1_160395564_160433670 | VANGL2 | CTGCG others(5349): Show |
chr1 | 160395564 | 160433670 |
| a0001c0002t0032 | 0/0 | 5353 | 1 | 0 | 0 | 1 | 0 | 0 | VANGL2_chr1_160395564_160433670 | VANGL2 | CTGCG others(5348): Show |
chr1 | 160395564 | 160433670 |
| a0001c0002t0033 | 0/0 | 5354 | 1 | 0 | 0 | 0 | 0 | 1 | VANGL2_chr1_160395564_160433670 | VANGL2 | CTGCG others(5349): Show |
chr1 | 160395564 | 160433670 |
| a0001c0002t0037 | 0/0 | 5355 | 1 | 1 | 0 | 0 | 0 | 0 | VANGL2_chr1_160395564_160433670 | VANGL2 | CTGCG others(5350): Show |
chr1 | 160395564 | 160433670 |
| a0001c0002t0044 | 0/0 | 5362 | 1 | 0 | 0 | 1 | 0 | 0 | VANGL2_chr1_160395564_160433670 | VANGL2 | CTGCG others(5357): Show |
chr1 | 160395564 | 160433670 |
| a0001c0002t0048 | 0/0 | 5354 | 1 | 0 | 0 | 1 | 0 | 0 | VANGL2_chr1_160395564_160433670 | VANGL2 | CTGCG others(5349): Show |
chr1 | 160395564 | 160433670 |
| a0001c0003t0001 | 0/0 | 5355 | 65 | 18 | 10 | 28 | 2 | 7 | VANGL2_chr1_160395564_160433670 | VANGL2 | CTGCG others(5350): Show |
chr1 | 160395564 | 160433670 |
| a0001c0003t0002 | 0/0 | 5354 | 1 | 0 | 0 | 0 | 1 | 0 | VANGL2_chr1_160395564_160433670 | VANGL2 | CTGCG others(5349): Show |
chr1 | 160395564 | 160433670 |
| a0001c0003t0004 | 0/0 | 5363 | 1 | 0 | 0 | 0 | 0 | 1 | VANGL2_chr1_160395564_160433670 | VANGL2 | CTGCG others(5358): Show |
chr1 | 160395564 | 160433670 |
| a0001c0003t0005 | 0/0 | 5358 | 4 | 0 | 3 | 0 | 1 | 0 | VANGL2_chr1_160395564_160433670 | VANGL2 | CTGCG others(5353): Show |
chr1 | 160395564 | 160433670 |
| a0001c0003t0014 | 0/0 | 5355 | 3 | 0 | 0 | 0 | 0 | 3 | VANGL2_chr1_160395564_160433670 | VANGL2 | CTGCG others(5350): Show |
chr1 | 160395564 | 160433670 |
| a0001c0003t0015 | 0/0 | 5355 | 3 | 0 | 0 | 0 | 0 | 3 | VANGL2_chr1_160395564_160433670 | VANGL2 | CTGCG others(5350): Show |
chr1 | 160395564 | 160433670 |
| a0001c0003t0022 | 0/0 | 5355 | 1 | 1 | 0 | 0 | 0 | 0 | VANGL2_chr1_160395564_160433670 | VANGL2 | CTGCG others(5350): Show |
chr1 | 160395564 | 160433670 |
| a0001c0003t0029 | 0/0 | 5354 | 1 | 0 | 0 | 0 | 1 | 0 | VANGL2_chr1_160395564_160433670 | VANGL2 | CTGCG others(5349): Show |
chr1 | 160395564 | 160433670 |
| a0001c0003t0030 | 0/0 | 5355 | 1 | 0 | 0 | 0 | 0 | 1 | VANGL2_chr1_160395564_160433670 | VANGL2 | CTGCG others(5350): Show |
chr1 | 160395564 | 160433670 |
| a0001c0004t0007 | 0/0 | 5355 | 7 | 7 | 0 | 0 | 0 | 0 | VANGL2_chr1_160395564_160433670 | VANGL2 | CTGCG others(5350): Show |
chr1 | 160395564 | 160433670 |
| a0001c0004t0047 | 0/0 | 5355 | 1 | 0 | 1 | 0 | 0 | 0 | VANGL2_chr1_160395564_160433670 | VANGL2 | CTGCG others(5350): Show |
chr1 | 160395564 | 160433670 |
| a0001c0005t0009 | 0/0 | 5357 | 2 | 1 | 1 | 0 | 0 | 0 | VANGL2_chr1_160395564_160433670 | VANGL2 | CTGCG others(5352): Show |
chr1 | 160395564 | 160433670 |
| a0001c0007t0001 | 0/0 | 5355 | 1 | 0 | 0 | 0 | 0 | 1 | VANGL2_chr1_160395564_160433670 | VANGL2 | CTGCG others(5350): Show |
chr1 | 160395564 | 160433670 |
| a0001c0008t0046 | 0/0 | 5364 | 1 | 0 | 0 | 0 | 0 | 1 | VANGL2_chr1_160395564_160433670 | VANGL2 | CTGCG others(5359): Show |
chr1 | 160395564 | 160433670 |
| a0001c0009t0001 | 0/0 | 5355 | 1 | 1 | 0 | 0 | 0 | 0 | VANGL2_chr1_160395564_160433670 | VANGL2 | CTGCG others(5350): Show |
chr1 | 160395564 | 160433670 |
| a0001c0010t0018 | 0/0 | 5363 | 1 | 0 | 0 | 0 | 0 | 1 | VANGL2_chr1_160395564_160433670 | VANGL2 | CTGCG others(5358): Show |
chr1 | 160395564 | 160433670 |
| a0001c0011t0028 | 0/0 | 5355 | 1 | 1 | 0 | 0 | 0 | 0 | VANGL2_chr1_160395564_160433670 | VANGL2 | CTGCG others(5350): Show |
chr1 | 160395564 | 160433670 |
| a0002c0006t0001 | 0/0 | 5355 | 2 | 0 | 0 | 2 | 0 | 0 | VANGL2_chr1_160395564_160433670 | VANGL2 | CTGCG others(5350): Show |
chr1 | 160395564 | 160433670 |
| actghapid | grch38/chm13v2 | total | AFR | AMR | EAS | EUR | SAS | regionname | genename | chr | start | end |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| a0001c0001t0001g0005 | 0/0 | 13 | 0 | 1 | 12 | 0 | 0 | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| a0001c0001t0001g0015 | 0/0 | 3 | 3 | 0 | 0 | 0 | 0 | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| a0001c0001t0001g0017 | 0/0 | 3 | 3 | 0 | 0 | 0 | 0 | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| a0001c0001t0001g0018 | 0/0 | 4 | 0 | 0 | 4 | 0 | 0 | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| a0001c0001t0001g0031 | 0/0 | 2 | 2 | 0 | 0 | 0 | 0 | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| a0001c0001t0001g0097 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| a0001c0001t0001g0106 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| a0001c0001t0001g0123 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| a0001c0001t0001g0128 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| a0001c0001t0001g0132 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| a0001c0001t0001g0155 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| a0001c0001t0001g0157 | 0/0 | 1 | 0 | 0 | 0 | 1 | 0 | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| a0001c0001t0001g0159 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| a0001c0001t0001g0161 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| a0001c0001t0001g0167 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| a0001c0001t0001g0169 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| a0001c0001t0001g0171 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| a0001c0001t0001g0176 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| a0001c0001t0001g0178 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| a0001c0001t0003g0003 | 0/0 | 16 | 0 | 3 | 11 | 0 | 2 | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| a0001c0001t0003g0011 | 0/0 | 5 | 0 | 0 | 5 | 0 | 0 | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| a0001c0001t0003g0014 | 0/0 | 2 | 0 | 0 | 1 | 0 | 1 | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| a0001c0001t0003g0050 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| a0001c0001t0003g0057 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| a0001c0001t0003g0058 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| a0001c0001t0003g0060 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| a0001c0001t0003g0061 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| a0001c0001t0003g0065 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| a0001c0001t0003g0067 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| a0001c0001t0003g0068 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| a0001c0001t0003g0069 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| a0001c0001t0003g0070 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| a0001c0001t0003g0071 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| a0001c0001t0003g0073 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| a0001c0001t0003g0074 | 0/0 | 1 | 0 | 0 | 0 | 1 | 0 | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| a0001c0001t0003g0076 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| a0001c0001t0003g0077 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| a0001c0001t0003g0078 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| a0001c0001t0003g0079 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| a0001c0001t0003g0104 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| a0001c0001t0004g0006 | 0/0 | 7 | 0 | 2 | 2 | 0 | 3 | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| a0001c0001t0004g0009 | 0/0 | 5 | 5 | 0 | 0 | 0 | 0 | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| a0001c0001t0004g0039 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| a0001c0001t0004g0051 | 0/0 | 1 | 0 | 0 | 0 | 1 | 0 | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| a0001c0001t0004g0052 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| a0001c0001t0004g0158 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| a0001c0001t0005g0025 | 0/0 | 3 | 3 | 0 | 0 | 0 | 0 | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| a0001c0001t0005g0046 | 0/0 | 2 | 2 | 0 | 0 | 0 | 0 | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| a0001c0001t0005g0048 | 0/0 | 2 | 2 | 0 | 0 | 0 | 0 | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| a0001c0001t0005g0081 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| a0001c0001t0005g0163 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| a0001c0001t0005g0164 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| a0001c0001t0006g0006 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| a0001c0001t0006g0009 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| a0001c0001t0006g0035 | 0/0 | 2 | 0 | 0 | 2 | 0 | 0 | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| a0001c0001t0006g0043 | 0/0 | 2 | 0 | 2 | 0 | 0 | 0 | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| a0001c0001t0006g0095 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| a0001c0001t0006g0118 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| a0001c0001t0006g0151 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| a0001c0001t0011g0024 | 0/0 | 3 | 3 | 0 | 0 | 0 | 0 | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| a0001c0001t0011g0152 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| a0001c0001t0012g0150 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| a0001c0001t0012g0153 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| a0001c0001t0012g0154 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| a0001c0001t0016g0003 | 0/0 | 1 | 0 | 0 | 0 | 1 | 0 | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| a0001c0001t0016g0014 | 0/0 | 1 | 0 | 0 | 0 | 1 | 0 | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| a0001c0001t0017g0003 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| a0001c0001t0017g0084 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| a0001c0001t0018g0072 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| a0001c0001t0019g0003 | 0/0 | 2 | 0 | 0 | 0 | 0 | 2 | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| a0001c0001t0020g0042 | 0/0 | 2 | 2 | 0 | 0 | 0 | 0 | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| a0001c0001t0022g0170 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| a0001c0001t0023g0047 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| a0001c0001t0023g0175 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| a0001c0001t0025g0003 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| a0001c0001t0026g0003 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| a0001c0001t0027g0066 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| a0001c0001t0034g0107 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| a0001c0001t0035g0014 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| a0001c0001t0036g0017 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| a0001c0001t0038g0147 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| a0001c0001t0039g0001 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| a0001c0001t0040g0080 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| a0001c0001t0041g0039 | 0/0 | 1 | 0 | 0 | 0 | 1 | 0 | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| a0001c0001t0042g0064 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| a0001c0001t0043g0047 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| a0001c0001t0045g0166 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| a0001c0001t0049g0015 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| a0001c0002t0001g0001 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| a0001c0002t0001g0013 | 0/0 | 5 | 4 | 1 | 0 | 0 | 0 | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| a0001c0002t0001g0049 | 0/0 | 2 | 2 | 0 | 0 | 0 | 0 | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| a0001c0002t0001g0111 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| a0001c0002t0001g0174 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| a0001c0002t0002g0001 | 0/0 | 35 | 1 | 9 | 15 | 3 | 7 | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| a0001c0002t0002g0007 | 0/0 | 7 | 0 | 0 | 7 | 0 | 0 | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| a0001c0002t0002g0008 | 0/0 | 6 | 0 | 0 | 6 | 0 | 0 | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| a0001c0002t0002g0010 | 1/0 | 6 | 0 | 1 | 4 | 0 | 0 | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| a0001c0002t0002g0012 | 0/0 | 3 | 0 | 0 | 3 | 0 | 0 | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| a0001c0002t0002g0016 | 0/0 | 4 | 0 | 2 | 0 | 0 | 2 | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| a0001c0002t0002g0020 | 0/0 | 3 | 0 | 2 | 0 | 0 | 1 | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| a0001c0002t0002g0021 | 0/0 | 3 | 0 | 2 | 0 | 0 | 1 | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| a0001c0002t0002g0022 | 0/0 | 3 | 0 | 0 | 3 | 0 | 0 | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| a0001c0002t0002g0023 | 0/0 | 2 | 1 | 1 | 0 | 0 | 0 | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| a0001c0002t0002g0032 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| a0001c0002t0002g0034 | 0/0 | 2 | 0 | 0 | 2 | 0 | 0 | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| a0001c0002t0002g0036 | 0/0 | 2 | 0 | 1 | 0 | 0 | 1 | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| a0001c0002t0002g0040 | 0/0 | 2 | 0 | 0 | 2 | 0 | 0 | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| a0001c0002t0002g0041 | 0/0 | 2 | 0 | 0 | 2 | 0 | 0 | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| a0001c0002t0002g0096 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| a0001c0002t0002g0099 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| a0001c0002t0002g0110 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| a0001c0002t0002g0112 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| a0001c0002t0002g0114 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| a0001c0002t0002g0115 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| a0001c0002t0002g0119 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| a0001c0002t0002g0120 | 0/0 | 1 | 0 | 0 | 0 | 1 | 0 | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| a0001c0002t0002g0121 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| a0001c0002t0002g0125 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| a0001c0002t0002g0126 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| a0001c0002t0002g0127 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| a0001c0002t0002g0129 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| a0001c0002t0002g0131 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| a0001c0002t0002g0133 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| a0001c0002t0002g0134 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| a0001c0002t0002g0135 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| a0001c0002t0002g0138 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| a0001c0002t0002g0139 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| a0001c0002t0002g0140 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| a0001c0002t0002g0141 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| a0001c0002t0002g0144 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| a0001c0002t0002g0145 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| a0001c0002t0002g0146 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| a0001c0002t0002g0162 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| a0001c0002t0002g0177 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| a0001c0002t0008g0001 | 0/0 | 4 | 1 | 2 | 0 | 1 | 0 | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| a0001c0002t0008g0032 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| a0001c0002t0008g0122 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| a0001c0002t0009g0023 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| a0001c0002t0009g0033 | 0/0 | 2 | 0 | 2 | 0 | 0 | 0 | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| a0001c0002t0009g0116 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| a0001c0002t0010g0019 | 0/0 | 3 | 0 | 0 | 3 | 0 | 0 | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| a0001c0002t0010g0053 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| a0001c0002t0010g0054 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| a0001c0002t0010g0055 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| a0001c0002t0013g0029 | 0/0 | 2 | 0 | 0 | 2 | 0 | 0 | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| a0001c0002t0013g0090 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| a0001c0002t0021g0012 | 0/0 | 2 | 0 | 0 | 2 | 0 | 0 | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| a0001c0002t0024g0130 | 0/1 | 1 | 0 | 0 | 0 | 0 | 0 | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| a0001c0002t0031g0008 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| a0001c0002t0032g0117 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| a0001c0002t0033g0001 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| a0001c0002t0037g0173 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| a0001c0002t0044g0056 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| a0001c0002t0048g0136 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| a0001c0003t0001g0002 | 0/0 | 21 | 0 | 2 | 18 | 0 | 1 | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| a0001c0003t0001g0004 | 0/0 | 12 | 1 | 4 | 3 | 1 | 3 | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| a0001c0003t0001g0026 | 0/0 | 3 | 3 | 0 | 0 | 0 | 0 | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| a0001c0003t0001g0028 | 0/0 | 2 | 2 | 0 | 0 | 0 | 0 | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| a0001c0003t0001g0030 | 0/0 | 2 | 0 | 0 | 2 | 0 | 0 | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| a0001c0003t0001g0038 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| a0001c0003t0001g0044 | 0/0 | 2 | 1 | 1 | 0 | 0 | 0 | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| a0001c0003t0001g0075 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| a0001c0003t0001g0082 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| a0001c0003t0001g0083 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| a0001c0003t0001g0087 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| a0001c0003t0001g0088 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| a0001c0003t0001g0089 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| a0001c0003t0001g0091 | 0/0 | 1 | 0 | 0 | 0 | 1 | 0 | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| a0001c0003t0001g0092 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| a0001c0003t0001g0093 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| a0001c0003t0001g0094 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| a0001c0003t0001g0098 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| a0001c0003t0001g0102 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| a0001c0003t0001g0103 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| a0001c0003t0001g0108 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| a0001c0003t0001g0113 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| a0001c0003t0001g0137 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| a0001c0003t0001g0142 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| a0001c0003t0001g0148 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| a0001c0003t0001g0149 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| a0001c0003t0001g0156 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| a0001c0003t0001g0160 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| a0001c0003t0001g0168 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| a0001c0003t0002g0004 | 0/0 | 1 | 0 | 0 | 0 | 1 | 0 | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| a0001c0003t0004g0004 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| a0001c0003t0005g0004 | 0/0 | 3 | 0 | 3 | 0 | 0 | 0 | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| a0001c0003t0005g0100 | 0/0 | 1 | 0 | 0 | 0 | 1 | 0 | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| a0001c0003t0014g0038 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| a0001c0003t0014g0124 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| a0001c0003t0014g0143 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| a0001c0003t0015g0002 | 0/0 | 3 | 0 | 0 | 0 | 0 | 3 | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| a0001c0003t0022g0172 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| a0001c0003t0029g0004 | 0/0 | 1 | 0 | 0 | 0 | 1 | 0 | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| a0001c0003t0030g0004 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| a0001c0004t0007g0027 | 0/0 | 2 | 2 | 0 | 0 | 0 | 0 | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| a0001c0004t0007g0045 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| a0001c0004t0007g0062 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| a0001c0004t0007g0063 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| a0001c0004t0007g0085 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| a0001c0004t0007g0086 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| a0001c0004t0047g0045 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| a0001c0005t0009g0037 | 0/0 | 2 | 1 | 1 | 0 | 0 | 0 | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| a0001c0007t0001g0101 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| a0001c0008t0046g0109 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| a0001c0009t0001g0165 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| a0001c0010t0018g0059 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| a0001c0011t0028g0105 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| a0002c0006t0001g0005 | 0/0 | 2 | 0 | 0 | 2 | 0 | 0 | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| sampleid | ID haplotypeid
|
ahapid | chapid | thapid | ghapid | gpopname | popname | regionname | genename | chr | start | end |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| HG00099 | hp1 | a0001 | c0001 | t0041 | g0039 | EUR | GBR | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| HG00099 | hp2 | a0001 | c0003 | t0002 | g0004 | EUR | GBR | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| HG00140 | hp1 | a0001 | c0003 | t0005 | g0100 | EUR | GBR | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| HG00140 | hp2 | a0001 | c0002 | t0002 | g0001 | EUR | GBR | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| HG00280 | hp1 | a0001 | c0002 | t0008 | g0001 | EUR | FIN | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| HG00280 | hp2 | a0001 | c0003 | t0001 | g0091 | EUR | FIN | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| HG00408 | hp1 | a0001 | c0002 | t0002 | g0008 | EAS | CHS | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| HG00408 | hp2 | a0001 | c0003 | t0001 | g0002 | EAS | CHS | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| HG00423 | hp1 | a0001 | c0002 | t0002 | g0040 | EAS | CHS | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| HG00423 | hp2 | a0001 | c0001 | t0001 | g0167 | EAS | CHS | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| HG00438 | hp1 | a0001 | c0002 | t0010 | g0019 | EAS | CHS | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| HG00438 | hp2 | a0001 | c0003 | t0001 | g0004 | EAS | CHS | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| HG00544 | hp1 | a0001 | c0003 | t0001 | g0002 | EAS | CHS | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| HG00544 | hp2 | a0001 | c0002 | t0002 | g0012 | EAS | CHS | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| HG00558 | hp1 | a0001 | c0003 | t0001 | g0148 | EAS | CHS | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| HG00558 | hp2 | a0001 | c0003 | t0001 | g0002 | EAS | CHS | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| HG00597 | hp1 | a0001 | c0001 | t0004 | g0006 | EAS | CHS | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| HG00597 | hp2 | a0001 | c0002 | t0002 | g0125 | EAS | CHS | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| HG00609 | hp1 | a0001 | c0002 | t0002 | g0001 | EAS | CHS | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| HG00609 | hp2 | a0001 | c0001 | t0001 | g0005 | EAS | CHS | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| HG00621 | hp1 | a0001 | c0002 | t0002 | g0001 | EAS | CHS | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| HG00621 | hp2 | a0001 | c0003 | t0001 | g0002 | EAS | CHS | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| HG00639 | hp1 | a0001 | c0002 | t0002 | g0016 | AMR | PUR | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| HG00639 | hp2 | a0001 | c0001 | t0006 | g0043 | AMR | PUR | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| HG00642 | hp1 | a0001 | c0001 | t0001 | g0005 | AMR | PUR | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| HG00642 | hp2 | a0001 | c0001 | t0025 | g0003 | AMR | PUR | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| HG00673 | hp1 | a0001 | c0001 | t0003 | g0061 | EAS | CHS | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| HG00673 | hp2 | a0001 | c0003 | t0001 | g0002 | EAS | CHS | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| HG00733 | hp1 | a0001 | c0002 | t0002 | g0177 | AMR | PUR | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| HG00733 | hp2 | a0001 | c0003 | t0001 | g0004 | AMR | PUR | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| HG00735 | hp1 | a0001 | c0003 | t0005 | g0004 | AMR | PUR | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| HG00735 | hp2 | a0001 | c0002 | t0009 | g0116 | AMR | PUR | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| HG00738 | hp1 | a0001 | c0002 | t0008 | g0001 | AMR | PUR | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| HG00738 | hp2 | a0001 | c0001 | t0006 | g0043 | AMR | PUR | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| HG00741 | hp1 | a0001 | c0003 | t0001 | g0044 | AMR | PUR | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| HG00741 | hp2 | a0001 | c0001 | t0003 | g0060 | AMR | PUR | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| HG01069 | hp1 | a0001 | c0002 | t0002 | g0016 | AMR | PUR | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| HG01069 | hp2 | a0001 | c0003 | t0005 | g0004 | AMR | PUR | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| HG01070 | hp1 | a0001 | c0002 | t0002 | g0010 | AMR | PUR | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| HG01070 | hp2 | a0001 | c0003 | t0001 | g0002 | AMR | PUR | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| HG01081 | hp1 | a0001 | c0002 | t0002 | g0021 | AMR | PUR | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| HG01081 | hp2 | a0001 | c0003 | t0005 | g0004 | AMR | PUR | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| HG01106 | hp1 | a0001 | c0002 | t0002 | g0021 | AMR | PUR | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| HG01106 | hp2 | a0001 | c0002 | t0001 | g0013 | AMR | PUR | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| HG01109 | hp1 | a0001 | c0002 | t0002 | g0162 | AMR | PUR | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| HG01109 | hp2 | a0001 | c0004 | t0047 | g0045 | AMR | PUR | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| HG01167 | hp1 | a0001 | c0001 | t0003 | g0070 | AMR | PUR | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| HG01167 | hp2 | a0001 | c0002 | t0009 | g0033 | AMR | PUR | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| HG01169 | hp1 | a0001 | c0002 | t0009 | g0033 | AMR | PUR | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| HG01169 | hp2 | a0001 | c0001 | t0006 | g0151 | AMR | PUR | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| HG01192 | hp1 | a0001 | c0001 | t0006 | g0118 | AMR | PUR | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| HG01192 | hp2 | a0001 | c0003 | t0001 | g0038 | AMR | PUR | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| HG01243 | hp1 | a0001 | c0003 | t0001 | g0004 | AMR | PUR | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| HG01243 | hp2 | a0001 | c0001 | t0003 | g0003 | AMR | PUR | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| HG01255 | hp1 | a0001 | c0002 | t0002 | g0131 | AMR | CLM | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| HG01255 | hp2 | a0001 | c0003 | t0001 | g0004 | AMR | CLM | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| HG01256 | hp1 | a0001 | c0003 | t0001 | g0088 | AMR | CLM | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| HG01256 | hp2 | a0001 | c0001 | t0004 | g0006 | AMR | CLM | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| HG01258 | hp1 | a0001 | c0001 | t0004 | g0006 | AMR | CLM | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| HG01258 | hp2 | a0001 | c0002 | t0002 | g0001 | AMR | CLM | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| HG01261 | hp1 | a0001 | c0002 | t0008 | g0001 | AMR | CLM | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| HG01261 | hp2 | a0001 | c0001 | t0039 | g0001 | AMR | CLM | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| HG01346 | hp1 | a0001 | c0002 | t0008 | g0122 | AMR | CLM | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| HG01346 | hp2 | a0001 | c0002 | t0002 | g0001 | AMR | CLM | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| HG01358 | hp1 | a0001 | c0002 | t0002 | g0001 | AMR | CLM | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| HG01358 | hp2 | a0001 | c0001 | t0003 | g0003 | AMR | CLM | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| HG01361 | hp1 | a0001 | c0002 | t0002 | g0096 | AMR | CLM | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| HG01361 | hp2 | a0001 | c0002 | t0002 | g0001 | AMR | CLM | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| HG01433 | hp1 | a0001 | c0002 | t0002 | g0001 | AMR | CLM | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| HG01433 | hp2 | a0001 | c0003 | t0001 | g0004 | AMR | CLM | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| HG01515 | hp1 | a0001 | c0001 | t0016 | g0014 | EUR | IBS | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| HG01515 | hp2 | a0001 | c0002 | t0002 | g0120 | EUR | IBS | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| HG01516 | hp1 | a0001 | c0001 | t0001 | g0157 | EUR | IBS | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| HG01516 | hp2 | a0001 | c0002 | t0002 | g0001 | EUR | IBS | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| HG01517 | hp1 | a0001 | c0001 | t0016 | g0003 | EUR | IBS | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| HG01517 | hp2 | a0001 | c0002 | t0002 | g0001 | EUR | IBS | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| HG01884 | hp1 | a0001 | c0001 | t0004 | g0039 | AFR | ACB | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| HG01884 | hp2 | a0001 | c0001 | t0020 | g0042 | AFR | ACB | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| HG01891 | hp1 | a0001 | c0002 | t0001 | g0013 | AFR | ACB | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| HG01891 | hp2 | a0001 | c0001 | t0001 | g0015 | AFR | ACB | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| HG01928 | hp1 | a0001 | c0002 | t0002 | g0099 | AMR | PEL | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| HG01928 | hp2 | a0001 | c0001 | t0003 | g0073 | AMR | PEL | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| HG01978 | hp1 | a0001 | c0002 | t0002 | g0001 | AMR | PEL | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| HG01978 | hp2 | a0001 | c0002 | t0002 | g0020 | AMR | PEL | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| HG01981 | hp1 | a0001 | c0002 | t0002 | g0001 | AMR | PEL | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| HG01981 | hp2 | a0001 | c0001 | t0003 | g0003 | AMR | PEL | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| HG02004 | hp1 | a0001 | c0005 | t0009 | g0037 | AMR | PEL | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| HG02004 | hp2 | a0001 | c0003 | t0001 | g0098 | AMR | PEL | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| HG02027 | hp1 | a0001 | c0002 | t0002 | g0001 | EAS | KHV | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| HG02027 | hp2 | a0001 | c0001 | t0001 | g0005 | EAS | KHV | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| HG02040 | hp1 | a0001 | c0002 | t0002 | g0012 | EAS | KHV | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| HG02040 | hp2 | a0001 | c0002 | t0002 | g0126 | EAS | KHV | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| HG02055 | hp1 | a0001 | c0001 | t0045 | g0166 | AFR | ACB | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| HG02055 | hp2 | a0001 | c0004 | t0007 | g0045 | AFR | ACB | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| HG02056 | hp1 | a0001 | c0001 | t0001 | g0097 | EAS | KHV | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| HG02056 | hp2 | a0001 | c0003 | t0001 | g0002 | EAS | KHV | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| HG02071 | hp1 | a0001 | c0001 | t0006 | g0035 | EAS | KHV | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| HG02071 | hp2 | a0001 | c0002 | t0002 | g0022 | EAS | KHV | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| HG02074 | hp1 | a0001 | c0001 | t0003 | g0003 | EAS | KHV | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| HG02074 | hp2 | a0001 | c0002 | t0002 | g0141 | EAS | KHV | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| HG02080 | hp1 | a0001 | c0002 | t0048 | g0136 | EAS | KHV | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| HG02080 | hp2 | a0002 | c0006 | t0001 | g0005 | EAS | KHV | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| HG02083 | hp1 | a0001 | c0002 | t0044 | g0056 | EAS | KHV | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| HG02083 | hp2 | a0001 | c0001 | t0003 | g0050 | EAS | KHV | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| HG02145 | hp1 | a0001 | c0001 | t0004 | g0009 | AFR | ACB | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| HG02145 | hp2 | a0001 | c0001 | t0005 | g0046 | AFR | ACB | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| HG02155 | hp1 | a0001 | c0001 | t0001 | g0005 | EAS | CDX | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| HG02155 | hp2 | a0001 | c0002 | t0002 | g0135 | EAS | CDX | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| HG02165 | hp1 | a0002 | c0006 | t0001 | g0005 | EAS | CDX | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| HG02165 | hp2 | a0001 | c0002 | t0032 | g0117 | EAS | CDX | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| HG02257 | hp1 | a0001 | c0003 | t0001 | g0160 | AFR | ACB | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| HG02257 | hp2 | a0001 | c0004 | t0007 | g0027 | AFR | ACB | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| HG02258 | hp1 | a0001 | c0001 | t0023 | g0047 | AFR | ACB | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| HG02258 | hp2 | a0001 | c0001 | t0022 | g0170 | AFR | ACB | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| HG02273 | hp1 | a0001 | c0002 | t0002 | g0001 | AMR | PEL | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| HG02273 | hp2 | a0001 | c0002 | t0002 | g0023 | AMR | PEL | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| HG02280 | hp1 | a0001 | c0001 | t0004 | g0052 | AFR | ACB | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| HG02280 | hp2 | a0001 | c0001 | t0005 | g0025 | AFR | ACB | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| HG02293 | hp1 | a0001 | c0002 | t0002 | g0001 | AMR | PEL | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| HG02293 | hp2 | a0001 | c0002 | t0009 | g0023 | AMR | PEL | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| HG02300 | hp1 | a0001 | c0003 | t0001 | g0002 | AMR | PEL | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| HG02300 | hp2 | a0001 | c0002 | t0008 | g0032 | AMR | PEL | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| HG02451 | hp1 | a0001 | c0002 | t0001 | g0049 | AFR | ACB | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| HG02451 | hp2 | a0001 | c0001 | t0005 | g0164 | AFR | ACB | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| HG02523 | hp1 | a0001 | c0002 | t0002 | g0139 | EAS | KHV | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| HG02523 | hp2 | a0001 | c0001 | t0001 | g0005 | EAS | KHV | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| HG02572 | hp1 | a0001 | c0003 | t0001 | g0026 | AFR | GWD | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| HG02572 | hp2 | a0001 | c0003 | t0001 | g0149 | AFR | GWD | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| HG02602 | hp1 | a0001 | c0001 | t0019 | g0003 | SAS | PJL | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| HG02602 | hp2 | a0001 | c0002 | t0002 | g0001 | SAS | PJL | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| HG02615 | hp1 | a0001 | c0003 | t0001 | g0044 | AFR | GWD | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| HG02615 | hp2 | a0001 | c0001 | t0005 | g0081 | AFR | GWD | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| HG02622 | hp1 | a0001 | c0001 | t0005 | g0163 | AFR | GWD | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| HG02622 | hp2 | a0001 | c0011 | t0028 | g0105 | AFR | GWD | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| HG02630 | hp1 | a0001 | c0003 | t0001 | g0156 | AFR | GWD | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| HG02630 | hp2 | a0001 | c0001 | t0006 | g0009 | AFR | GWD | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| HG02647 | hp1 | a0001 | c0001 | t0001 | g0031 | AFR | GWD | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| HG02647 | hp2 | a0001 | c0003 | t0001 | g0087 | AFR | GWD | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| HG02683 | hp1 | a0001 | c0003 | t0001 | g0094 | SAS | PJL | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| HG02683 | hp2 | a0001 | c0001 | t0003 | g0014 | SAS | PJL | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| HG02698 | hp1 | a0001 | c0002 | t0002 | g0001 | SAS | PJL | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| HG02698 | hp2 | a0001 | c0003 | t0001 | g0004 | SAS | PJL | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| HG02717 | hp1 | a0001 | c0001 | t0005 | g0025 | AFR | GWD | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| HG02717 | hp2 | a0001 | c0002 | t0037 | g0173 | AFR | GWD | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| HG02723 | hp1 | a0001 | c0004 | t0007 | g0086 | AFR | GWD | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| HG02723 | hp2 | a0001 | c0001 | t0011 | g0152 | AFR | GWD | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| HG02735 | hp1 | a0001 | c0001 | t0019 | g0003 | SAS | PJL | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| HG02735 | hp2 | a0001 | c0003 | t0001 | g0089 | SAS | PJL | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| HG02738 | hp1 | a0001 | c0001 | t0003 | g0003 | SAS | PJL | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| HG02738 | hp2 | a0001 | c0003 | t0014 | g0143 | SAS | PJL | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| HG02809 | hp1 | a0001 | c0001 | t0042 | g0064 | AFR | GWD | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| HG02809 | hp2 | a0001 | c0001 | t0001 | g0123 | AFR | GWD | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| HG02818 | hp1 | a0001 | c0003 | t0001 | g0026 | AFR | GWD | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| HG02818 | hp2 | a0001 | c0001 | t0004 | g0009 | AFR | GWD | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| HG02886 | hp1 | a0001 | c0003 | t0001 | g0026 | AFR | GWD | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| HG02886 | hp2 | a0001 | c0004 | t0007 | g0063 | AFR | GWD | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| HG02895 | hp1 | a0001 | c0002 | t0001 | g0013 | AFR | GWD | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| HG02895 | hp2 | a0001 | c0001 | t0011 | g0024 | AFR | GWD | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| HG02896 | hp1 | a0001 | c0002 | t0001 | g0174 | AFR | GWD | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| HG02896 | hp2 | a0001 | c0004 | t0007 | g0085 | AFR | GWD | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| HG02922 | hp1 | a0001 | c0002 | t0001 | g0013 | AFR | ESN | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| HG02922 | hp2 | a0001 | c0002 | t0002 | g0134 | AFR | ESN | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| HG02965 | hp1 | a0001 | c0001 | t0001 | g0017 | AFR | ESN | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| HG02965 | hp2 | a0001 | c0003 | t0001 | g0168 | AFR | ESN | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| HG02970 | hp1 | a0001 | c0009 | t0001 | g0165 | AFR | ESN | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| HG02970 | hp2 | a0001 | c0001 | t0038 | g0147 | AFR | ESN | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| HG02976 | hp1 | a0001 | c0002 | t0001 | g0111 | AFR | ESN | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| HG02976 | hp2 | a0001 | c0001 | t0005 | g0046 | AFR | ESN | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| HG03017 | hp1 | a0001 | c0002 | t0002 | g0016 | SAS | PJL | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| HG03017 | hp2 | a0001 | c0001 | t0006 | g0095 | SAS | PJL | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| HG03041 | hp1 | a0001 | c0001 | t0036 | g0017 | AFR | GWD | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| HG03041 | hp2 | a0001 | c0001 | t0020 | g0042 | AFR | GWD | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| HG03098 | hp1 | a0001 | c0001 | t0011 | g0024 | AFR | MSL | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| HG03098 | hp2 | a0001 | c0001 | t0001 | g0017 | AFR | MSL | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| HG03130 | hp1 | a0001 | c0001 | t0035 | g0014 | AFR | ESN | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| HG03130 | hp2 | a0001 | c0001 | t0004 | g0009 | AFR | ESN | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| HG03139 | hp1 | a0001 | c0003 | t0001 | g0082 | AFR | ESN | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| HG03139 | hp2 | a0001 | c0001 | t0004 | g0009 | AFR | ESN | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| HG03195 | hp1 | a0001 | c0001 | t0001 | g0015 | AFR | ESN | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| HG03195 | hp2 | a0001 | c0001 | t0011 | g0024 | AFR | ESN | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| HG03209 | hp1 | a0001 | c0003 | t0001 | g0028 | AFR | MSL | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| HG03209 | hp2 | a0001 | c0001 | t0023 | g0175 | AFR | MSL | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| HG03225 | hp1 | a0001 | c0001 | t0001 | g0159 | AFR | MSL | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| HG03225 | hp2 | a0001 | c0003 | t0001 | g0108 | AFR | MSL | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| HG03239 | hp1 | a0001 | c0008 | t0046 | g0109 | SAS | PJL | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| HG03239 | hp2 | a0001 | c0001 | t0004 | g0006 | SAS | PJL | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| HG03453 | hp1 | a0001 | c0003 | t0001 | g0083 | AFR | MSL | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| HG03453 | hp2 | a0001 | c0001 | t0049 | g0015 | AFR | MSL | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| HG03486 | hp1 | a0001 | c0001 | t0001 | g0015 | AFR | MSL | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| HG03486 | hp2 | a0001 | c0001 | t0001 | g0031 | AFR | MSL | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| HG03490 | hp1 | a0001 | c0010 | t0018 | g0059 | SAS | PJL | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| HG03490 | hp2 | a0001 | c0003 | t0015 | g0002 | SAS | PJL | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| HG03491 | hp1 | a0001 | c0002 | t0002 | g0001 | SAS | PJL | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| HG03491 | hp2 | a0001 | c0001 | t0003 | g0067 | SAS | PJL | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| HG03492 | hp1 | a0001 | c0003 | t0015 | g0002 | SAS | PJL | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| HG03492 | hp2 | a0001 | c0002 | t0002 | g0001 | SAS | PJL | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| HG03540 | hp1 | a0001 | c0004 | t0007 | g0062 | AFR | GWD | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| HG03540 | hp2 | a0001 | c0001 | t0001 | g0171 | AFR | GWD | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| HG03579 | hp1 | a0001 | c0002 | t0002 | g0001 | AFR | MSL | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| HG03579 | hp2 | a0001 | c0001 | t0001 | g0106 | AFR | MSL | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| HG03654 | hp1 | a0001 | c0002 | t0002 | g0001 | SAS | PJL | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| HG03654 | hp2 | a0001 | c0003 | t0004 | g0004 | SAS | PJL | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| HG03669 | hp1 | a0001 | c0001 | t0003 | g0003 | SAS | PJL | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| HG03669 | hp2 | a0001 | c0001 | t0006 | g0006 | SAS | PJL | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| HG03688 | hp1 | a0001 | c0007 | t0001 | g0101 | SAS | STU | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| HG03688 | hp2 | a0001 | c0001 | t0012 | g0154 | SAS | STU | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| HG03704 | hp1 | a0001 | c0002 | t0002 | g0110 | SAS | PJL | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| HG03704 | hp2 | a0001 | c0003 | t0015 | g0002 | SAS | PJL | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| HG03710 | hp1 | a0001 | c0001 | t0012 | g0153 | SAS | PJL | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| HG03710 | hp2 | a0001 | c0002 | t0002 | g0001 | SAS | PJL | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| HG03831 | hp1 | a0001 | c0002 | t0002 | g0020 | SAS | BEB | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| HG03831 | hp2 | a0001 | c0003 | t0001 | g0004 | SAS | BEB | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| HG03834 | hp1 | a0001 | c0002 | t0002 | g0001 | SAS | BEB | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| HG03834 | hp2 | a0001 | c0003 | t0030 | g0004 | SAS | BEB | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| HG03927 | hp1 | a0001 | c0003 | t0001 | g0002 | SAS | BEB | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| HG03927 | hp2 | a0001 | c0002 | t0033 | g0001 | SAS | BEB | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| HG03942 | hp1 | a0001 | c0003 | t0014 | g0038 | SAS | BEB | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| HG03942 | hp2 | a0001 | c0002 | t0002 | g0036 | SAS | BEB | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| HG04115 | hp1 | a0001 | c0003 | t0001 | g0142 | SAS | STU | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| HG04115 | hp2 | a0001 | c0001 | t0017 | g0084 | SAS | STU | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| HG04184 | hp1 | a0001 | c0002 | t0002 | g0016 | SAS | BEB | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| HG04184 | hp2 | a0001 | c0001 | t0017 | g0003 | SAS | BEB | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| HG04199 | hp1 | a0001 | c0003 | t0014 | g0124 | SAS | STU | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| HG04199 | hp2 | a0001 | c0001 | t0004 | g0006 | SAS | STU | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| HG04204 | hp1 | a0001 | c0003 | t0001 | g0004 | SAS | STU | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| HG04204 | hp2 | a0001 | c0002 | t0002 | g0021 | SAS | STU | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| HG04228 | hp1 | a0001 | c0001 | t0012 | g0150 | SAS | STU | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| HG04228 | hp2 | a0001 | c0001 | t0004 | g0006 | SAS | STU | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| NA18522 | hp1 | a0001 | c0001 | t0005 | g0048 | AFR | YRI | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| NA18522 | hp2 | a0001 | c0003 | t0001 | g0103 | AFR | YRI | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| NA18612 | hp1 | a0001 | c0001 | t0001 | g0005 | EAS | CHB | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| NA18612 | hp2 | a0001 | c0003 | t0001 | g0137 | EAS | CHB | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| NA18747 | hp1 | a0001 | c0002 | t0002 | g0133 | EAS | CHB | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| NA18747 | hp2 | a0001 | c0001 | t0006 | g0035 | EAS | CHB | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| NA18906 | hp1 | a0001 | c0001 | t0005 | g0025 | AFR | YRI | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| NA18906 | hp2 | a0001 | c0003 | t0022 | g0172 | AFR | YRI | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| NA18939 | hp1 | a0001 | c0002 | t0002 | g0007 | EAS | JPT | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| NA18939 | hp2 | a0001 | c0003 | t0001 | g0002 | EAS | JPT | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| NA18940 | hp1 | a0001 | c0002 | t0010 | g0054 | EAS | JPT | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| NA18940 | hp2 | a0001 | c0002 | t0002 | g0001 | EAS | JPT | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| NA18941 | hp1 | a0001 | c0001 | t0001 | g0005 | EAS | JPT | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| NA18941 | hp2 | a0001 | c0003 | t0001 | g0002 | EAS | JPT | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| NA18942 | hp1 | a0001 | c0001 | t0001 | g0005 | EAS | JPT | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| NA18942 | hp2 | a0001 | c0002 | t0002 | g0010 | EAS | JPT | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| NA18944 | hp1 | a0001 | c0002 | t0002 | g0001 | EAS | JPT | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| NA18944 | hp2 | a0001 | c0002 | t0002 | g0012 | EAS | JPT | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| NA18945 | hp1 | a0001 | c0002 | t0002 | g0008 | EAS | JPT | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| NA18945 | hp2 | a0001 | c0001 | t0003 | g0003 | EAS | JPT | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| NA18948 | hp1 | a0001 | c0002 | t0002 | g0144 | EAS | JPT | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| NA18948 | hp2 | a0001 | c0001 | t0001 | g0018 | EAS | JPT | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| NA18949 | hp1 | a0001 | c0002 | t0002 | g0129 | EAS | JPT | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| NA18949 | hp2 | a0001 | c0001 | t0004 | g0158 | EAS | JPT | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| NA18950 | hp1 | a0001 | c0002 | t0002 | g0001 | EAS | JPT | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| NA18950 | hp2 | a0001 | c0002 | t0002 | g0022 | EAS | JPT | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| NA18951 | hp1 | a0001 | c0003 | t0001 | g0002 | EAS | JPT | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| NA18951 | hp2 | a0001 | c0002 | t0010 | g0019 | EAS | JPT | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| NA18952 | hp1 | a0001 | c0001 | t0003 | g0003 | EAS | JPT | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| NA18952 | hp2 | a0001 | c0002 | t0013 | g0090 | EAS | JPT | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| NA18953 | hp1 | a0001 | c0003 | t0001 | g0092 | EAS | JPT | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| NA18953 | hp2 | a0001 | c0002 | t0021 | g0012 | EAS | JPT | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| NA18959 | hp1 | a0001 | c0003 | t0001 | g0002 | EAS | JPT | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| NA18959 | hp2 | a0001 | c0001 | t0003 | g0003 | EAS | JPT | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| NA18962 | hp1 | a0001 | c0001 | t0003 | g0003 | EAS | JPT | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| NA18962 | hp2 | a0001 | c0001 | t0001 | g0005 | EAS | JPT | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| NA18963 | hp1 | a0001 | c0003 | t0001 | g0002 | EAS | JPT | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| NA18963 | hp2 | a0001 | c0002 | t0021 | g0012 | EAS | JPT | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| NA18967 | hp1 | a0001 | c0002 | t0013 | g0029 | EAS | JPT | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| NA18967 | hp2 | a0001 | c0001 | t0026 | g0003 | EAS | JPT | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| NA18968 | hp1 | a0001 | c0002 | t0002 | g0001 | EAS | JPT | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| NA18968 | hp2 | a0001 | c0001 | t0001 | g0132 | EAS | JPT | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| NA18970 | hp1 | a0001 | c0002 | t0002 | g0010 | EAS | JPT | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| NA18970 | hp2 | a0001 | c0001 | t0003 | g0065 | EAS | JPT | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| NA18971 | hp1 | a0001 | c0003 | t0001 | g0002 | EAS | JPT | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| NA18971 | hp2 | a0001 | c0001 | t0003 | g0011 | EAS | JPT | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| NA18974 | hp1 | a0001 | c0001 | t0001 | g0178 | EAS | JPT | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| NA18974 | hp2 | a0001 | c0001 | t0003 | g0011 | EAS | JPT | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| NA18975 | hp1 | a0001 | c0002 | t0002 | g0114 | EAS | JPT | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| NA18975 | hp2 | a0001 | c0001 | t0003 | g0057 | EAS | JPT | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| NA18979 | hp1 | a0001 | c0002 | t0010 | g0055 | EAS | JPT | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| NA18979 | hp2 | a0001 | c0002 | t0002 | g0034 | EAS | JPT | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| NA18980 | hp1 | a0001 | c0002 | t0002 | g0008 | EAS | JPT | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| NA18980 | hp2 | a0001 | c0003 | t0001 | g0102 | EAS | JPT | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| NA18982 | hp1 | a0001 | c0002 | t0002 | g0008 | EAS | JPT | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| NA18982 | hp2 | a0001 | c0001 | t0018 | g0072 | EAS | JPT | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| NA18983 | hp1 | a0001 | c0001 | t0003 | g0079 | EAS | JPT | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| NA18983 | hp2 | a0001 | c0002 | t0002 | g0008 | EAS | JPT | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| NA18984 | hp1 | a0001 | c0001 | t0004 | g0006 | EAS | JPT | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| NA18984 | hp2 | a0001 | c0001 | t0003 | g0003 | EAS | JPT | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| NA18985 | hp1 | a0001 | c0001 | t0003 | g0068 | EAS | JPT | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| NA18985 | hp2 | a0001 | c0001 | t0001 | g0018 | EAS | JPT | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| NA18986 | hp1 | a0001 | c0001 | t0003 | g0011 | EAS | JPT | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| NA18986 | hp2 | a0001 | c0001 | t0003 | g0071 | EAS | JPT | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| NA18987 | hp1 | a0001 | c0002 | t0002 | g0008 | EAS | JPT | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| NA18987 | hp2 | a0001 | c0003 | t0001 | g0002 | EAS | JPT | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| NA18988 | hp1 | a0001 | c0001 | t0001 | g0018 | EAS | JPT | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| NA18988 | hp2 | a0001 | c0002 | t0002 | g0010 | EAS | JPT | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| NA18989 | hp1 | a0001 | c0001 | t0003 | g0011 | EAS | JPT | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| NA18989 | hp2 | a0001 | c0002 | t0001 | g0001 | EAS | JPT | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| NA18991 | hp1 | a0001 | c0002 | t0002 | g0007 | EAS | JPT | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| NA18991 | hp2 | a0001 | c0001 | t0003 | g0076 | EAS | JPT | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| NA18992 | hp1 | a0001 | c0002 | t0002 | g0032 | EAS | JPT | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| NA18992 | hp2 | a0001 | c0001 | t0027 | g0066 | EAS | JPT | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| NA18993 | hp1 | a0001 | c0003 | t0001 | g0004 | EAS | JPT | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| NA18993 | hp2 | a0001 | c0002 | t0002 | g0007 | EAS | JPT | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| NA18994 | hp1 | a0001 | c0002 | t0002 | g0041 | EAS | JPT | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| NA18994 | hp2 | a0001 | c0001 | t0001 | g0005 | EAS | JPT | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| NA18995 | hp1 | a0001 | c0003 | t0001 | g0030 | EAS | JPT | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| NA18995 | hp2 | a0001 | c0001 | t0003 | g0011 | EAS | JPT | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| NA18997 | hp1 | a0001 | c0003 | t0001 | g0002 | EAS | JPT | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| NA18997 | hp2 | a0001 | c0002 | t0002 | g0140 | EAS | JPT | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| NA19000 | hp1 | a0001 | c0003 | t0001 | g0093 | EAS | JPT | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| NA19000 | hp2 | a0001 | c0002 | t0002 | g0138 | EAS | JPT | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| NA19002 | hp1 | a0001 | c0001 | t0001 | g0161 | EAS | JPT | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| NA19002 | hp2 | a0001 | c0002 | t0002 | g0112 | EAS | JPT | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| NA19007 | hp1 | a0001 | c0002 | t0002 | g0001 | EAS | JPT | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| NA19007 | hp2 | a0001 | c0003 | t0001 | g0004 | EAS | JPT | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| NA19009 | hp1 | a0001 | c0002 | t0002 | g0001 | EAS | JPT | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| NA19009 | hp2 | a0001 | c0001 | t0003 | g0003 | EAS | JPT | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| NA19010 | hp1 | a0001 | c0002 | t0002 | g0040 | EAS | JPT | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| NA19010 | hp2 | a0001 | c0002 | t0002 | g0001 | EAS | JPT | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| NA19011 | hp1 | a0001 | c0001 | t0001 | g0005 | EAS | JPT | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| NA19011 | hp2 | a0001 | c0003 | t0001 | g0002 | EAS | JPT | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| NA19012 | hp1 | a0001 | c0002 | t0002 | g0007 | EAS | JPT | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| NA19012 | hp2 | a0001 | c0003 | t0001 | g0002 | EAS | JPT | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| NA19030 | hp1 | a0001 | c0001 | t0001 | g0128 | AFR | LWK | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| NA19030 | hp2 | a0001 | c0001 | t0001 | g0155 | AFR | LWK | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| NA19043 | hp1 | a0001 | c0001 | t0004 | g0009 | AFR | LWK | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| NA19043 | hp2 | a0001 | c0002 | t0001 | g0013 | AFR | LWK | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| NA19054 | hp1 | a0001 | c0002 | t0002 | g0001 | EAS | JPT | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| NA19054 | hp2 | a0001 | c0001 | t0003 | g0003 | EAS | JPT | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| NA19055 | hp1 | a0001 | c0001 | t0003 | g0104 | EAS | JPT | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| NA19055 | hp2 | a0001 | c0002 | t0002 | g0007 | EAS | JPT | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| NA19056 | hp1 | a0001 | c0002 | t0010 | g0053 | EAS | JPT | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| NA19056 | hp2 | a0001 | c0002 | t0002 | g0001 | EAS | JPT | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| NA19057 | hp1 | a0001 | c0002 | t0010 | g0019 | EAS | JPT | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| NA19057 | hp2 | a0001 | c0002 | t0002 | g0145 | EAS | JPT | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| NA19058 | hp1 | a0001 | c0002 | t0002 | g0007 | EAS | JPT | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| NA19058 | hp2 | a0001 | c0003 | t0001 | g0002 | EAS | JPT | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| NA19060 | hp1 | a0001 | c0001 | t0001 | g0018 | EAS | JPT | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| NA19060 | hp2 | a0001 | c0002 | t0013 | g0029 | EAS | JPT | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| NA19062 | hp1 | a0001 | c0002 | t0031 | g0008 | EAS | JPT | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| NA19062 | hp2 | a0001 | c0001 | t0003 | g0078 | EAS | JPT | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| NA19064 | hp1 | a0001 | c0002 | t0002 | g0007 | EAS | JPT | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| NA19064 | hp2 | a0001 | c0001 | t0001 | g0005 | EAS | JPT | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| NA19065 | hp1 | a0001 | c0003 | t0001 | g0030 | EAS | JPT | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| NA19065 | hp2 | a0001 | c0002 | t0002 | g0127 | EAS | JPT | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| NA19070 | hp1 | a0001 | c0002 | t0002 | g0001 | EAS | JPT | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| NA19070 | hp2 | a0001 | c0001 | t0003 | g0069 | EAS | JPT | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| NA19072 | hp1 | a0001 | c0001 | t0003 | g0058 | EAS | JPT | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| NA19072 | hp2 | a0001 | c0002 | t0002 | g0001 | EAS | JPT | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| NA19076 | hp1 | a0001 | c0002 | t0002 | g0041 | EAS | JPT | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| NA19076 | hp2 | a0001 | c0001 | t0003 | g0003 | EAS | JPT | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| NA19078 | hp1 | a0001 | c0002 | t0002 | g0115 | EAS | JPT | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| NA19078 | hp2 | a0001 | c0001 | t0003 | g0077 | EAS | JPT | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| NA19079 | hp1 | a0001 | c0002 | t0002 | g0119 | EAS | JPT | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| NA19079 | hp2 | a0001 | c0002 | t0002 | g0034 | EAS | JPT | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| NA19084 | hp1 | a0001 | c0001 | t0003 | g0014 | EAS | JPT | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| NA19084 | hp2 | a0001 | c0003 | t0001 | g0002 | EAS | JPT | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| NA19085 | hp1 | a0001 | c0001 | t0003 | g0003 | EAS | JPT | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| NA19085 | hp2 | a0001 | c0002 | t0002 | g0010 | EAS | JPT | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| NA19087 | hp1 | a0001 | c0001 | t0003 | g0003 | EAS | JPT | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| NA19087 | hp2 | a0001 | c0002 | t0002 | g0146 | EAS | JPT | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| NA19090 | hp1 | a0001 | c0002 | t0002 | g0121 | EAS | JPT | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| NA19090 | hp2 | a0001 | c0001 | t0001 | g0005 | EAS | JPT | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| NA19091 | hp1 | a0001 | c0002 | t0002 | g0001 | EAS | JPT | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| NA19091 | hp2 | a0001 | c0002 | t0002 | g0022 | EAS | JPT | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| NA19240 | hp1 | a0001 | c0001 | t0001 | g0017 | AFR | YRI | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| NA19240 | hp2 | a0001 | c0003 | t0001 | g0075 | AFR | YRI | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| NA20129 | hp1 | a0001 | c0003 | t0001 | g0004 | AFR | ASW | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| NA20129 | hp2 | a0001 | c0005 | t0009 | g0037 | AFR | ASW | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| NA20752 | hp1 | a0001 | c0003 | t0029 | g0004 | EUR | TSI | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| NA20752 | hp2 | a0001 | c0003 | t0001 | g0004 | EUR | TSI | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| NA20805 | hp1 | a0001 | c0001 | t0004 | g0051 | EUR | TSI | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| NA20805 | hp2 | a0001 | c0001 | t0003 | g0074 | EUR | TSI | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| HG01123 | hp1 | a0001 | c0002 | t0002 | g0020 | AMR | CLM | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| HG01123 | hp2 | a0001 | c0002 | t0002 | g0036 | AMR | CLM | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| HG02486 | hp1 | a0001 | c0004 | t0007 | g0027 | AFR | ACB | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| HG02486 | hp2 | a0001 | c0001 | t0005 | g0048 | AFR | ACB | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| HG02559 | hp1 | a0001 | c0001 | t0043 | g0047 | AFR | ACB | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| HG02559 | hp2 | a0001 | c0002 | t0008 | g0001 | AFR | ACB | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| HG03471 | hp1 | a0001 | c0001 | t0001 | g0169 | AFR | MSL | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| HG03471 | hp2 | a0001 | c0002 | t0001 | g0049 | AFR | MSL | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| HG06807 | hp1 | a0001 | c0001 | t0040 | g0080 | AFR | USA | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| HG06807 | hp2 | a0001 | c0001 | t0001 | g0176 | AFR | USA | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| NA20300 | hp1 | a0001 | c0002 | t0002 | g0023 | AFR | USA | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| NA20300 | hp2 | a0001 | c0001 | t0034 | g0107 | AFR | USA | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| NA21309 | hp1 | a0001 | c0003 | t0001 | g0028 | AFR | LWK | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| NA21309 | hp2 | a0001 | c0003 | t0001 | g0113 | AFR | LWK | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| homoSapiens | chm13v2 | a0001 | c0002 | t0024 | g0130 | REF | REF | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| homoSapiens | grch38p0 | a0001 | c0002 | t0002 | g0010 | REF | REF | VANGL2_chr1_160395564_160433670 | VANGL2 | chr1 | 160395564 | 160433670 |
| view | chr:pos | ref | alt | # # of ahapid:amino-acid(protein) level |
ahapids | # # of haplotypeids |
haplotypeids | annotation | impact | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length |
cds cds pos length |
aa aa pos length |
distance | status | chr | pos |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| chr1:160425140 | C | T | 1 | a0002 | 2 | HG02080.hp2 HG02165.hp1 |
missense_variant | MODERATE | c.1328C>T | p.Ala443Val | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 8/8 | 1824/5354 | 1328/1566 | 443/521 | chr1 | 160425140 |
| view | chr:pos | ref | alt | # # of chapid |
chapids | # # of haplotypeids |
haplotypeids | annotation | impact | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length |
cds cds pos length |
aa aa pos length |
distance | status | chr | pos |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| chr1:160421119 | C | T | 1 | a0001c0011 | 1 | HG02622.hp2 | synonymous_variant | LOW | c.1005C>T | p.Asp335Asp | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 6/8 | 1501/5354 | 1005/1566 | 335/521 | chr1 | 160421119 | |||
| chr1:160424064 | G | A | 1 | a0001c0007 | 1 | HG03688.hp1 | synonymous_variant | LOW | c.1086G>A | p.Ala362Ala | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 7/8 | 1582/5354 | 1086/1566 | 362/521 | chr1 | 160424064 | |||
| chr1:160424115 | A | G | 7 | a0001c0001 a0001c0003 a0001c0004 others(4): Show |
241 | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(238): Show |
synonymous_variant | LOW | c.1137A>G | p.Lys379Lys | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 7/8 | 1633/5354 | 1137/1566 | 379/521 | chr1 | 160424115 | |||
| chr1:160424220 | C | T | 1 | a0001c0005 | 2 | HG02004.hp1 NA20129.hp2 |
synonymous_variant | LOW | c.1242C>T | p.Tyr414Tyr | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 7/8 | 1738/5354 | 1242/1566 | 414/521 | chr1 | 160424220 | |||
| chr1:160424265 | G | T | 1 | a0001c0010 | 1 | HG03490.hp1 | synonymous_variant | LOW | c.1287G>T | p.Thr429Thr | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 7/8 | 1783/5354 | 1287/1566 | 429/521 | chr1 | 160424265 | |||
| chr1:160425147 | A | C | 3 | a0001c0003 a0001c0007 a0001c0009 |
82 | HG00099.hp2 HG00140.hp1 HG00280.hp2 others(79): Show |
synonymous_variant | LOW | c.1335A>C | p.Gly445Gly | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 8/8 | 1831/5354 | 1335/1566 | 445/521 | chr1 | 160425147 | |||
| chr1:160425183 | C | T | 1 | a0001c0008 | 1 | HG03239.hp1 | synonymous_variant | LOW | c.1371C>T | p.Ala457Ala | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 8/8 | 1867/5354 | 1371/1566 | 457/521 | chr1 | 160425183 | |||
| chr1:160425213 | G | A | 4 | a0001c0003 a0001c0004 a0001c0007 others(1): Show |
90 | HG00099.hp2 HG00140.hp1 HG00280.hp2 others(87): Show |
synonymous_variant | LOW | c.1401G>A | p.Pro467Pro | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 8/8 | 1897/5354 | 1401/1566 | 467/521 | chr1 | 160425213 |
| view | chr:pos | ref | alt | # # of thapid:transcript level |
thapids | # # of haplotypeids |
haplotypeids | annotation | impact | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length |
cds cds pos length |
aa aa pos length |
distance | status | chr | pos |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| chr1:160400615 | G | C | 9 | a0001c0001t0003 a0001c0001t0016 a0001c0001t0017 others(6): Show |
52 | HG00642.hp2 HG00673.hp1 HG00741.hp2 others(49): Show |
5_prime_UTR_variant | MODIFIER | c.-445G>C | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 1/8 | 15223 | chr1 | 160400615 | ||||||
| chr1:160400679 | G | T | 1 | a0001c0001t0049 | 1 | HG03453.hp2 | 5_prime_UTR_premature_start_codon_gain_variant | LOW | c.-381G>T | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 1/8 | chr1 | 160400679 | |||||||
| chr1:160400704 | G | A | 1 | a0001c0011t0028 | 1 | HG02622.hp2 | 5_prime_UTR_variant | MODIFIER | c.-356G>A | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 1/8 | 15134 | chr1 | 160400704 | ||||||
| chr1:160400707 | G | A | 1 | a0001c0001t0020 | 2 | HG01884.hp2 HG03041.hp2 |
5_prime_UTR_variant | MODIFIER | c.-353G>A | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 1/8 | 15131 | chr1 | 160400707 | ||||||
| chr1:160400830 | G | C | 1 | a0001c0003t0029 | 1 | NA20752.hp1 | 5_prime_UTR_variant | MODIFIER | c.-230G>C | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 1/8 | 15008 | chr1 | 160400830 | ||||||
| chr1:160400840 | C | T | 1 | a0001c0002t0048 | 1 | HG02080.hp1 | 5_prime_UTR_variant | MODIFIER | c.-220C>T | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 1/8 | 14998 | chr1 | 160400840 | ||||||
| chr1:160415655 | G | A | 1 | a0001c0001t0025 | 1 | HG00642.hp2 | 5_prime_UTR_variant | MODIFIER | c.-183G>A | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 2/8 | 183 | chr1 | 160415655 | ||||||
| chr1:160415688 | A | G | 1 | a0001c0001t0019 | 2 | HG02602.hp1 HG02735.hp1 |
5_prime_UTR_variant | MODIFIER | c.-150A>G | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 2/8 | 150 | chr1 | 160415688 | ||||||
| chr1:160415778 | C | A | 1 | a0001c0003t0030 | 1 | HG03834.hp2 | 5_prime_UTR_variant | MODIFIER | c.-60C>A | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 2/8 | 60 | chr1 | 160415778 | ||||||
| chr1:160415822 | G | A | 1 | a0001c0001t0012 | 3 | HG03688.hp2 HG03710.hp1 HG04228.hp1 |
5_prime_UTR_variant | MODIFIER | c.-16G>A | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 2/8 | 16 | chr1 | 160415822 | ||||||
| chr1:160425486 | C | CT | 46 | a0001c0001t0001 a0001c0001t0003 a0001c0001t0004 others(43): Show |
258 | HG00099.hp1 HG00140.hp1 HG00280.hp2 others(255): Show |
3_prime_UTR_variant | MODIFIER | c.*118dupT | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 8/8 | 119 | INFO_REALIGN_3_PRIME | chr1 | 160425486 | |||||
| chr1:160425582 | A | G | 2 | a0001c0004t0007 a0001c0004t0047 |
8 | HG01109.hp2 HG02055.hp2 HG02257.hp2 others(5): Show |
3_prime_UTR_variant | MODIFIER | c.*204A>G | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 8/8 | 204 | chr1 | 160425582 | ||||||
| chr1:160425660 | C | T | 1 | a0001c0004t0047 | 1 | HG01109.hp2 | 3_prime_UTR_variant | MODIFIER | c.*282C>T | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 8/8 | 282 | chr1 | 160425660 | ||||||
| chr1:160425713 | G | A | 1 | a0001c0011t0028 | 1 | HG02622.hp2 | 3_prime_UTR_variant | MODIFIER | c.*335G>A | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 8/8 | 335 | chr1 | 160425713 | ||||||
| chr1:160426049 | C | T | 1 | a0001c0002t0033 | 1 | HG03927.hp2 | 3_prime_UTR_variant | MODIFIER | c.*671C>T | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 8/8 | 671 | chr1 | 160426049 | ||||||
| chr1:160426114 | T | C | 1 | a0001c0001t0034 | 1 | NA20300.hp2 | 3_prime_UTR_variant | MODIFIER | c.*736T>C | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 8/8 | 736 | chr1 | 160426114 | ||||||
| chr1:160426120 | T | C | 1 | a0001c0001t0035 | 1 | HG03130.hp1 | 3_prime_UTR_variant | MODIFIER | c.*742T>C | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 8/8 | 742 | chr1 | 160426120 | ||||||
| chr1:160426232 | C | T | 1 | a0001c0008t0046 | 1 | HG03239.hp1 | 3_prime_UTR_variant | MODIFIER | c.*854C>T | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 8/8 | 854 | chr1 | 160426232 | ||||||
| chr1:160426431 | T | C | 1 | a0001c0002t0013 | 3 | NA18952.hp2 NA18967.hp1 NA19060.hp2 |
3_prime_UTR_variant | MODIFIER | c.*1053T>C | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 8/8 | 1053 | chr1 | 160426431 | ||||||
| chr1:160426848 | G | C | 1 | a0001c0001t0036 | 1 | HG03041.hp1 | 3_prime_UTR_variant | MODIFIER | c.*1470G>C | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 8/8 | 1470 | chr1 | 160426848 | ||||||
| chr1:160426854 | C | A | 1 | a0001c0003t0014 | 3 | HG02738.hp2 HG03942.hp1 HG04199.hp1 |
3_prime_UTR_variant | MODIFIER | c.*1476C>A | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 8/8 | 1476 | chr1 | 160426854 | ||||||
| chr1:160426911 | C | T | 1 | a0001c0001t0045 | 1 | HG02055.hp1 | 3_prime_UTR_variant | MODIFIER | c.*1533C>T | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 8/8 | 1533 | chr1 | 160426911 | ||||||
| chr1:160427016 | A | C | 3 | a0001c0002t0010 a0001c0002t0044 a0001c0008t0046 |
8 | HG00438.hp1 HG02083.hp1 HG03239.hp1 others(5): Show |
3_prime_UTR_variant | MODIFIER | c.*1638A>C | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 8/8 | 1638 | chr1 | 160427016 | ||||||
| chr1:160427058 | A | G | 2 | a0001c0001t0023 a0001c0001t0043 |
3 | HG02258.hp1 HG02559.hp1 HG03209.hp2 |
3_prime_UTR_variant | MODIFIER | c.*1680A>G | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 8/8 | 1680 | chr1 | 160427058 | ||||||
| chr1:160427299 | T | C | 1 | a0001c0002t0037 | 1 | HG02717.hp2 | 3_prime_UTR_variant | MODIFIER | c.*1921T>C | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 8/8 | 1921 | chr1 | 160427299 | ||||||
| chr1:160427368 | T | C | 1 | a0001c0001t0038 | 1 | HG02970.hp2 | 3_prime_UTR_variant | MODIFIER | c.*1990T>C | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 8/8 | 1990 | chr1 | 160427368 | ||||||
| chr1:160427463 | T | C | 1 | a0001c0003t0015 | 3 | HG03490.hp2 HG03492.hp1 HG03704.hp2 |
3_prime_UTR_variant | MODIFIER | c.*2085T>C | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 8/8 | 2085 | chr1 | 160427463 | ||||||
| chr1:160427554 | C | CATT | 6 | a0001c0001t0005 a0001c0001t0027 a0001c0001t0045 others(3): Show |
22 | HG00140.hp1 HG00735.hp1 HG00735.hp2 others(19): Show |
3_prime_UTR_variant | MODIFIER | c.*2205_*2207dupTTA | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 8/8 | 2208 | INFO_REALIGN_3_PRIME | chr1 | 160427554 | |||||
| chr1:160427554 | C | CATTATT | 9 | a0001c0001t0003 a0001c0001t0006 a0001c0001t0017 others(6): Show |
61 | HG00639.hp2 HG00642.hp2 HG00673.hp1 others(58): Show |
3_prime_UTR_variant | MODIFIER | c.*2202_*2207dupTTAT others(2): Show |
VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 8/8 | 2208 | INFO_REALIGN_3_PRIME | chr1 | 160427554 | |||||
| chr1:160427554 | C | CATTATTA others(2): Show |
6 | a0001c0001t0004 a0001c0001t0018 a0001c0001t0043 others(3): Show |
21 | HG00597.hp1 HG01256.hp2 HG01258.hp1 others(18): Show |
3_prime_UTR_variant | MODIFIER | c.*2199_*2207dupTTAT others(5): Show |
VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 8/8 | 2208 | INFO_REALIGN_3_PRIME | chr1 | 160427554 | |||||
| chr1:160427554 | C | CATTATTA others(5): Show |
2 | a0001c0001t0041 a0001c0001t0042 |
2 | HG00099.hp1 HG02809.hp1 |
3_prime_UTR_variant | MODIFIER | c.*2196_*2207dupTTAT others(8): Show |
VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 8/8 | 2208 | INFO_REALIGN_3_PRIME | chr1 | 160427554 | |||||
| chr1:160427563 | T | A | 1 | a0001c0002t0031 | 1 | NA19062.hp1 | 3_prime_UTR_variant | MODIFIER | c.*2185T>A | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 8/8 | 2185 | chr1 | 160427563 | ||||||
| chr1:160427581 | T | TATTATTA | 2 | a0001c0002t0010 a0001c0002t0044 |
7 | HG00438.hp1 HG02083.hp1 NA18940.hp1 others(4): Show |
3_prime_UTR_variant | MODIFIER | c.*2207_*2208insTTAA others(3): Show |
VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 8/8 | 2208 | INFO_REALIGN_3_PRIME | chr1 | 160427581 | |||||
| chr1:160427767 | C | T | 1 | a0001c0002t0044 | 1 | HG02083.hp1 | 3_prime_UTR_variant | MODIFIER | c.*2389C>T | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 8/8 | 2389 | chr1 | 160427767 | ||||||
| chr1:160427838 | G | A | 1 | a0001c0002t0008 | 6 | HG00280.hp1 HG00738.hp1 HG01261.hp1 others(3): Show |
3_prime_UTR_variant | MODIFIER | c.*2460G>A | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 8/8 | 2460 | chr1 | 160427838 | ||||||
| chr1:160427882 | C | T | 4 | a0001c0001t0023 a0001c0001t0040 a0001c0001t0042 others(1): Show |
5 | HG02258.hp1 HG02559.hp1 HG02809.hp1 others(2): Show |
3_prime_UTR_variant | MODIFIER | c.*2504C>T | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 8/8 | 2504 | chr1 | 160427882 | ||||||
| chr1:160428229 | C | T | 4 | a0001c0001t0011 a0001c0002t0010 a0001c0002t0044 others(1): Show |
12 | HG00438.hp1 HG02083.hp1 HG02723.hp2 others(9): Show |
3_prime_UTR_variant | MODIFIER | c.*2851C>T | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 8/8 | 2851 | chr1 | 160428229 | ||||||
| chr1:160428449 | AT | A | 14 | a0001c0001t0003 a0001c0001t0004 a0001c0001t0006 others(11): Show |
80 | HG00099.hp1 HG00597.hp1 HG00639.hp2 others(77): Show |
3_prime_UTR_variant | MODIFIER | c.*3079delT | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 8/8 | 3079 | INFO_REALIGN_3_PRIME | chr1 | 160428449 | |||||
| chr1:160428467 | T | G | 4 | a0001c0001t0017 a0001c0001t0022 a0001c0002t0021 others(1): Show |
6 | HG02258.hp2 HG04115.hp2 HG04184.hp2 others(3): Show |
3_prime_UTR_variant | MODIFIER | c.*3089T>G | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 8/8 | 3089 | chr1 | 160428467 |
| view | chr:pos | ref | alt | # # of ghapid:genebody level |
ghapids | # # of haplotypeids |
haplotypeids | annotation | impact | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | genebody_biotype | rank | cdna cdna pos length |
cds cds pos length |
aa aa pos length |
distance | status | chr | pos |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| chr1:160400936 | A | C | 1 | a0001c0001t0001g0178 | 1 | NA18974.hp1 | intron_variant | MODIFIER | c.-191+67A>C | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 1/7 | chr1 | 160400936 | |||||||
| chr1:160400981 | G | C | 1 | a0001c0001t0003g0050 | 1 | HG02083.hp2 | intron_variant | MODIFIER | c.-191+112G>C | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 1/7 | chr1 | 160400981 | |||||||
| chr1:160401077 | AC | A | 87 | a0001c0001t0001g0031 a0001c0001t0001g0097 a0001c0001t0001g0106 others(84): Show |
156 | HG00099.hp2 HG00140.hp1 HG00280.hp2 others(153): Show |
intron_variant | MODIFIER | c.-191+216delC | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 1/7 | INFO_REALIGN_3_PRIME | chr1 | 160401077 | ||||||
| chr1:160401153 | C | T | 1 | a0001c0008t0046g0109 | 1 | HG03239.hp1 | intron_variant | MODIFIER | c.-191+284C>T | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 1/7 | chr1 | 160401153 | |||||||
| chr1:160401234 | G | A | 1 | a0001c0002t0002g0110 | 1 | HG03704.hp1 | intron_variant | MODIFIER | c.-191+365G>A | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 1/7 | chr1 | 160401234 | |||||||
| chr1:160401342 | G | A | 1 | a0001c0008t0046g0109 | 1 | HG03239.hp1 | intron_variant | MODIFIER | c.-191+473G>A | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 1/7 | chr1 | 160401342 | |||||||
| chr1:160401433 | T | C | 1 | a0001c0002t0001g0111 | 1 | HG02976.hp1 | intron_variant | MODIFIER | c.-191+564T>C | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 1/7 | chr1 | 160401433 | |||||||
| chr1:160401437 | G | C | 2 | a0001c0001t0004g0051 a0001c0001t0004g0052 |
2 | HG02280.hp1 NA20805.hp1 |
intron_variant | MODIFIER | c.-191+568G>C | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 1/7 | chr1 | 160401437 | |||||||
| chr1:160401653 | G | A | 1 | a0001c0002t0002g0112 | 1 | NA19002.hp2 | intron_variant | MODIFIER | c.-191+784G>A | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 1/7 | chr1 | 160401653 | |||||||
| chr1:160401744 | T | G | 1 | a0001c0003t0001g0113 | 1 | NA21309.hp2 | intron_variant | MODIFIER | c.-191+875T>G | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 1/7 | chr1 | 160401744 | |||||||
| chr1:160402129 | T | G | 6 | a0001c0002t0010g0019 a0001c0002t0010g0053 a0001c0002t0010g0054 others(3): Show |
8 | HG00438.hp1 HG02083.hp1 HG03239.hp1 others(5): Show |
intron_variant | MODIFIER | c.-191+1260T>G | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 1/7 | chr1 | 160402129 | |||||||
| chr1:160402319 | G | T | 145 | a0001c0001t0001g0005 a0001c0001t0001g0015 a0001c0001t0001g0017 others(142): Show |
259 | HG00099.hp2 HG00140.hp1 HG00280.hp2 others(256): Show |
intron_variant | MODIFIER | c.-191+1450G>T | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 1/7 | chr1 | 160402319 | |||||||
| chr1:160402489 | G | GGTGGGGA others(5): Show |
1 | a0001c0002t0002g0146 | 1 | NA19087.hp2 | intron_variant | MODIFIER | c.-191+1621_-191+162 others(16): Show |
VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 1/7 | INFO_REALIGN_3_PRIME | chr1 | 160402489 | ||||||
| chr1:160402592 | G | C | 1 | a0001c0001t0038g0147 | 1 | HG02970.hp2 | intron_variant | MODIFIER | c.-191+1723G>C | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 1/7 | chr1 | 160402592 | |||||||
| chr1:160402668 | C | T | 1 | a0001c0002t0002g0177 | 1 | HG00733.hp1 | intron_variant | MODIFIER | c.-191+1799C>T | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 1/7 | chr1 | 160402668 | |||||||
| chr1:160402671 | G | T | 6 | a0001c0002t0010g0019 a0001c0002t0010g0053 a0001c0002t0010g0054 others(3): Show |
8 | HG00438.hp1 HG02083.hp1 HG03239.hp1 others(5): Show |
intron_variant | MODIFIER | c.-191+1802G>T | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 1/7 | chr1 | 160402671 | |||||||
| chr1:160402759 | A | G | 1 | a0001c0002t0002g0145 | 1 | NA19057.hp2 | intron_variant | MODIFIER | c.-191+1890A>G | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 1/7 | chr1 | 160402759 | |||||||
| chr1:160402809 | T | C | 78 | a0001c0001t0001g0031 a0001c0001t0001g0097 a0001c0001t0003g0003 others(75): Show |
145 | HG00099.hp2 HG00140.hp1 HG00280.hp2 others(142): Show |
intron_variant | MODIFIER | c.-191+1940T>C | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 1/7 | chr1 | 160402809 | |||||||
| chr1:160402889 | C | T | 1 | a0001c0002t0044g0056 | 1 | HG02083.hp1 | intron_variant | MODIFIER | c.-191+2020C>T | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 1/7 | chr1 | 160402889 | |||||||
| chr1:160403034 | T | TCCTCAGG others(4): Show |
1 | a0001c0001t0003g0104 | 1 | NA19055.hp1 | intron_variant | MODIFIER | c.-191+2169_-191+217 others(15): Show |
VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 1/7 | INFO_REALIGN_3_PRIME | chr1 | 160403034 | ||||||
| chr1:160403147 | CT | C | 110 | a0001c0001t0001g0015 a0001c0001t0001g0031 a0001c0001t0001g0097 others(107): Show |
195 | HG00099.hp2 HG00140.hp1 HG00280.hp2 others(192): Show |
intron_variant | MODIFIER | c.-191+2291delT | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 1/7 | INFO_REALIGN_3_PRIME | chr1 | 160403147 | ||||||
| chr1:160403147 | CTT | C | 7 | a0001c0001t0020g0042 a0001c0002t0010g0019 a0001c0002t0010g0053 others(4): Show |
10 | HG00438.hp1 HG01884.hp2 HG02083.hp1 others(7): Show |
intron_variant | MODIFIER | c.-191+2290_-191+229 others(6): Show |
VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 1/7 | INFO_REALIGN_3_PRIME | chr1 | 160403147 | ||||||
| chr1:160403281 | C | T | 1 | a0001c0002t0002g0144 | 1 | NA18948.hp1 | intron_variant | MODIFIER | c.-191+2412C>T | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 1/7 | chr1 | 160403281 | |||||||
| chr1:160403305 | A | G | 4 | a0001c0001t0005g0025 a0001c0001t0005g0046 a0001c0001t0005g0163 others(1): Show |
7 | HG02145.hp2 HG02280.hp2 HG02451.hp2 others(4): Show |
intron_variant | MODIFIER | c.-191+2436A>G | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 1/7 | chr1 | 160403305 | |||||||
| chr1:160403368 | C | T | 7 | a0001c0001t0001g0176 a0001c0001t0023g0175 a0001c0002t0001g0013 others(4): Show |
12 | HG01106.hp2 HG01891.hp1 HG02451.hp1 others(9): Show |
intron_variant | MODIFIER | c.-191+2499C>T | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 1/7 | chr1 | 160403368 | |||||||
| chr1:160403428 | T | C | 1 | a0001c0001t0003g0057 | 1 | NA18975.hp2 | intron_variant | MODIFIER | c.-191+2559T>C | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 1/7 | chr1 | 160403428 | |||||||
| chr1:160403664 | GA | G | 91 | a0001c0001t0001g0031 a0001c0001t0001g0097 a0001c0001t0001g0106 others(88): Show |
161 | HG00099.hp2 HG00140.hp1 HG00280.hp2 others(158): Show |
intron_variant | MODIFIER | c.-191+2797delA | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 1/7 | INFO_REALIGN_3_PRIME | chr1 | 160403664 | ||||||
| chr1:160403703 | T | G | 1 | a0001c0001t0020g0042 | 2 | HG01884.hp2 HG03041.hp2 |
intron_variant | MODIFIER | c.-191+2834T>G | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 1/7 | chr1 | 160403703 | |||||||
| chr1:160404013 | A | G | 7 | a0001c0001t0020g0042 a0001c0002t0010g0019 a0001c0002t0010g0053 others(4): Show |
10 | HG00438.hp1 HG01884.hp2 HG02083.hp1 others(7): Show |
intron_variant | MODIFIER | c.-191+3144A>G | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 1/7 | chr1 | 160404013 | |||||||
| chr1:160404022 | T | C | 80 | a0001c0001t0001g0031 a0001c0001t0001g0097 a0001c0001t0003g0003 others(77): Show |
147 | HG00099.hp2 HG00140.hp1 HG00280.hp2 others(144): Show |
intron_variant | MODIFIER | c.-191+3153T>C | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 1/7 | chr1 | 160404022 | |||||||
| chr1:160404026 | G | A | 1 | a0001c0001t0038g0147 | 1 | HG02970.hp2 | intron_variant | MODIFIER | c.-191+3157G>A | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 1/7 | chr1 | 160404026 | |||||||
| chr1:160404115 | C | G | 2 | a0001c0001t0001g0031 a0001c0003t0001g0103 |
3 | HG02647.hp1 HG03486.hp2 NA18522.hp2 |
intron_variant | MODIFIER | c.-191+3246C>G | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 1/7 | chr1 | 160404115 | |||||||
| chr1:160404149 | GAT | G | 3 | a0001c0001t0005g0046 a0001c0001t0005g0163 a0001c0001t0005g0164 |
4 | HG02145.hp2 HG02451.hp2 HG02622.hp1 others(1): Show |
intron_variant | MODIFIER | c.-191+3281_-191+328 others(6): Show |
VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 1/7 | chr1 | 160404149 | |||||||
| chr1:160404161 | G | C | 1 | a0001c0001t0003g0104 | 1 | NA19055.hp1 | intron_variant | MODIFIER | c.-191+3292G>C | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 1/7 | chr1 | 160404161 | |||||||
| chr1:160404162 | C | G | 1 | a0001c0001t0003g0104 | 1 | NA19055.hp1 | intron_variant | MODIFIER | c.-191+3293C>G | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 1/7 | chr1 | 160404162 | |||||||
| chr1:160404167 | C | T | 29 | a0001c0001t0001g0097 a0001c0001t0004g0051 a0001c0001t0004g0052 others(26): Show |
68 | HG00099.hp2 HG00140.hp1 HG00280.hp2 others(65): Show |
intron_variant | MODIFIER | c.-191+3298C>T | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 1/7 | chr1 | 160404167 | |||||||
| chr1:160404260 | A | G | 1 | a0001c0001t0001g0018 | 4 | NA18948.hp2 NA18985.hp2 NA18988.hp1 others(1): Show |
intron_variant | MODIFIER | c.-191+3391A>G | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 1/7 | chr1 | 160404260 | |||||||
| chr1:160404309 | A | G | 90 | a0001c0001t0001g0031 a0001c0001t0001g0097 a0001c0001t0001g0106 others(87): Show |
160 | HG00099.hp2 HG00140.hp1 HG00280.hp2 others(157): Show |
intron_variant | MODIFIER | c.-191+3440A>G | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 1/7 | chr1 | 160404309 | |||||||
| chr1:160404346 | C | A | 1 | a0001c0001t0003g0104 | 1 | NA19055.hp1 | intron_variant | MODIFIER | c.-191+3477C>A | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 1/7 | chr1 | 160404346 | |||||||
| chr1:160404455 | C | A | 1 | a0001c0003t0001g0149 | 1 | HG02572.hp2 | intron_variant | MODIFIER | c.-191+3586C>A | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 1/7 | chr1 | 160404455 | |||||||
| chr1:160404871 | A | G | 6 | a0001c0002t0010g0019 a0001c0002t0010g0053 a0001c0002t0010g0054 others(3): Show |
8 | HG00438.hp1 HG02083.hp1 HG03239.hp1 others(5): Show |
intron_variant | MODIFIER | c.-191+4002A>G | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 1/7 | chr1 | 160404871 | |||||||
| chr1:160404900 | G | A | 1 | a0001c0008t0046g0109 | 1 | HG03239.hp1 | intron_variant | MODIFIER | c.-191+4031G>A | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 1/7 | chr1 | 160404900 | |||||||
| chr1:160404951 | A | C | 1 | a0001c0001t0003g0104 | 1 | NA19055.hp1 | intron_variant | MODIFIER | c.-191+4082A>C | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 1/7 | chr1 | 160404951 | |||||||
| chr1:160404952 | C | A | 1 | a0001c0001t0003g0104 | 1 | NA19055.hp1 | intron_variant | MODIFIER | c.-191+4083C>A | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 1/7 | chr1 | 160404952 | |||||||
| chr1:160405067 | G | A | 1 | a0001c0001t0012g0150 | 1 | HG04228.hp1 | intron_variant | MODIFIER | c.-191+4198G>A | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 1/7 | chr1 | 160405067 | |||||||
| chr1:160405273 | C | A | 1 | a0001c0001t0038g0147 | 1 | HG02970.hp2 | intron_variant | MODIFIER | c.-191+4404C>A | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 1/7 | chr1 | 160405273 | |||||||
| chr1:160405306 | C | T | 1 | a0001c0001t0001g0176 | 1 | HG06807.hp2 | intron_variant | MODIFIER | c.-191+4437C>T | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 1/7 | chr1 | 160405306 | |||||||
| chr1:160405541 | G | T | 3 | a0001c0003t0001g0087 a0001c0004t0007g0085 a0001c0004t0007g0086 |
3 | HG02647.hp2 HG02723.hp1 HG02896.hp2 |
intron_variant | MODIFIER | c.-191+4672G>T | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 1/7 | chr1 | 160405541 | |||||||
| chr1:160405599 | A | G | 1 | a0001c0001t0038g0147 | 1 | HG02970.hp2 | intron_variant | MODIFIER | c.-191+4730A>G | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 1/7 | chr1 | 160405599 | |||||||
| chr1:160405680 | C | G | 21 | a0001c0001t0001g0017 a0001c0001t0001g0157 a0001c0001t0001g0159 others(18): Show |
36 | HG00597.hp1 HG00639.hp1 HG00741.hp1 others(33): Show |
intron_variant | MODIFIER | c.-191+4811C>G | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 1/7 | chr1 | 160405680 | |||||||
| chr1:160405699 | A | T | 2 | a0001c0001t0004g0009 a0001c0001t0006g0009 |
6 | HG02145.hp1 HG02630.hp2 HG02818.hp2 others(3): Show |
intron_variant | MODIFIER | c.-191+4830A>T | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 1/7 | chr1 | 160405699 | |||||||
| chr1:160405871 | A | T | 1 | a0001c0001t0020g0042 | 2 | HG01884.hp2 HG03041.hp2 |
intron_variant | MODIFIER | c.-191+5002A>T | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 1/7 | chr1 | 160405871 | |||||||
| chr1:160405955 | T | C | 2 | a0001c0002t0002g0114 a0001c0002t0002g0115 |
2 | NA18975.hp1 NA19078.hp1 |
intron_variant | MODIFIER | c.-191+5086T>C | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 1/7 | chr1 | 160405955 | |||||||
| chr1:160406002 | A | G | 1 | a0001c0002t0044g0056 | 1 | HG02083.hp1 | intron_variant | MODIFIER | c.-191+5133A>G | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 1/7 | chr1 | 160406002 | |||||||
| chr1:160406164 | C | T | 15 | a0001c0001t0001g0015 a0001c0001t0001g0155 a0001c0001t0005g0025 others(12): Show |
23 | HG00639.hp2 HG00738.hp2 HG01169.hp2 others(20): Show |
intron_variant | MODIFIER | c.-191+5295C>T | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 1/7 | chr1 | 160406164 | |||||||
| chr1:160406225 | C | G | 15 | a0001c0001t0001g0015 a0001c0001t0001g0155 a0001c0001t0005g0025 others(12): Show |
23 | HG00639.hp2 HG00738.hp2 HG01169.hp2 others(20): Show |
intron_variant | MODIFIER | c.-191+5356C>G | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 1/7 | chr1 | 160406225 | |||||||
| chr1:160406270 | C | T | 21 | a0001c0001t0001g0017 a0001c0001t0001g0157 a0001c0001t0001g0159 others(18): Show |
36 | HG00597.hp1 HG00639.hp1 HG00741.hp1 others(33): Show |
intron_variant | MODIFIER | c.-191+5401C>T | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 1/7 | chr1 | 160406270 | |||||||
| chr1:160406373 | C | A | 1 | a0001c0011t0028g0105 | 1 | HG02622.hp2 | intron_variant | MODIFIER | c.-191+5504C>A | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 1/7 | chr1 | 160406373 | |||||||
| chr1:160406599 | C | T | 1 | a0001c0003t0022g0172 | 1 | NA18906.hp2 | intron_variant | MODIFIER | c.-191+5730C>T | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 1/7 | chr1 | 160406599 | |||||||
| chr1:160406630 | T | C | 4 | a0001c0001t0001g0106 a0001c0001t0034g0107 a0001c0003t0001g0108 others(1): Show |
4 | HG02622.hp2 HG03225.hp2 HG03579.hp2 others(1): Show |
intron_variant | MODIFIER | c.-191+5761T>C | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 1/7 | chr1 | 160406630 | |||||||
| chr1:160406736 | G | GT | 8 | a0001c0001t0001g0176 a0001c0001t0017g0084 a0001c0001t0023g0175 others(5): Show |
13 | HG01106.hp2 HG01891.hp1 HG02451.hp1 others(10): Show |
intron_variant | MODIFIER | c.-191+5880dupT | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 1/7 | INFO_REALIGN_3_PRIME | chr1 | 160406736 | ||||||
| chr1:160406736 | GT | G | 19 | a0001c0001t0001g0015 a0001c0001t0001g0155 a0001c0001t0003g0058 others(16): Show |
27 | HG00639.hp2 HG00738.hp2 HG01169.hp2 others(24): Show |
intron_variant | MODIFIER | c.-191+5880delT | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 1/7 | INFO_REALIGN_3_PRIME | chr1 | 160406736 | ||||||
| chr1:160406749 | T | G | 6 | a0001c0001t0001g0106 a0001c0001t0034g0107 a0001c0002t0009g0033 others(3): Show |
7 | HG00735.hp2 HG01167.hp2 HG01169.hp1 others(4): Show |
intron_variant | MODIFIER | c.-191+5880T>G | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 1/7 | chr1 | 160406749 | |||||||
| chr1:160406784 | A | G | 1 | a0001c0003t0014g0143 | 1 | HG02738.hp2 | intron_variant | MODIFIER | c.-191+5915A>G | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 1/7 | chr1 | 160406784 | |||||||
| chr1:160407087 | A | G | 25 | a0001c0001t0001g0015 a0001c0001t0001g0106 a0001c0001t0001g0155 others(22): Show |
35 | HG00438.hp1 HG00639.hp2 HG00738.hp2 others(32): Show |
intron_variant | MODIFIER | c.-191+6218A>G | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 1/7 | chr1 | 160407087 | |||||||
| chr1:160407143 | A | T | 10 | a0001c0001t0001g0106 a0001c0001t0034g0107 a0001c0002t0010g0019 others(7): Show |
12 | HG00438.hp1 HG02083.hp1 HG02622.hp2 others(9): Show |
intron_variant | MODIFIER | c.-191+6274A>T | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 1/7 | chr1 | 160407143 | |||||||
| chr1:160407410 | C | T | 1 | a0001c0001t0020g0042 | 2 | HG01884.hp2 HG03041.hp2 |
intron_variant | MODIFIER | c.-191+6541C>T | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 1/7 | chr1 | 160407410 | |||||||
| chr1:160407645 | C | G | 51 | a0001c0001t0001g0031 a0001c0001t0001g0097 a0001c0001t0001g0157 others(48): Show |
102 | HG00099.hp2 HG00140.hp1 HG00280.hp2 others(99): Show |
intron_variant | MODIFIER | c.-191+6776C>G | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 1/7 | chr1 | 160407645 | |||||||
| chr1:160407709 | C | T | 34 | a0001c0001t0001g0015 a0001c0001t0001g0017 a0001c0001t0001g0106 others(31): Show |
50 | HG00438.hp1 HG00639.hp2 HG00738.hp2 others(47): Show |
intron_variant | MODIFIER | c.-191+6840C>T | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 1/7 | chr1 | 160407709 | |||||||
| chr1:160407842 | A | G | 1 | a0001c0003t0001g0102 | 1 | NA18980.hp2 | intron_variant | MODIFIER | c.-191+6973A>G | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 1/7 | chr1 | 160407842 | |||||||
| chr1:160407993 | C | G | 35 | a0001c0001t0001g0015 a0001c0001t0001g0017 a0001c0001t0001g0106 others(32): Show |
51 | HG00438.hp1 HG00639.hp2 HG00738.hp2 others(48): Show |
intron_variant | MODIFIER | c.-191+7124C>G | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 1/7 | chr1 | 160407993 | |||||||
| chr1:160408190 | G | A | 22 | a0001c0001t0001g0015 a0001c0001t0001g0155 a0001c0001t0005g0025 others(19): Show |
32 | HG00438.hp1 HG00639.hp2 HG00738.hp2 others(29): Show |
intron_variant | MODIFIER | c.-191+7321G>A | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 1/7 | chr1 | 160408190 | |||||||
| chr1:160408218 | C | G | 1 | a0001c0002t0001g0049 | 2 | HG02451.hp1 HG03471.hp2 |
intron_variant | MODIFIER | c.-191+7349C>G | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 1/7 | chr1 | 160408218 | |||||||
| chr1:160408250 | G | C | 1 | a0001c0001t0003g0060 | 1 | HG00741.hp2 | intron_variant | MODIFIER | c.-191+7381G>C | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 1/7 | chr1 | 160408250 | |||||||
| chr1:160408420 | T | G | 2 | a0001c0001t0006g0043 a0001c0001t0006g0151 |
3 | HG00639.hp2 HG00738.hp2 HG01169.hp2 |
intron_variant | MODIFIER | c.-190-7228T>G | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 1/7 | chr1 | 160408420 | |||||||
| chr1:160408480 | C | G | 6 | a0001c0002t0010g0019 a0001c0002t0010g0053 a0001c0002t0010g0054 others(3): Show |
8 | HG00438.hp1 HG02083.hp1 HG03239.hp1 others(5): Show |
intron_variant | MODIFIER | c.-190-7168C>G | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 1/7 | chr1 | 160408480 | |||||||
| chr1:160408493 | T | A | 16 | a0001c0001t0001g0015 a0001c0001t0001g0155 a0001c0001t0005g0025 others(13): Show |
24 | HG00639.hp2 HG00738.hp2 HG01169.hp2 others(21): Show |
intron_variant | MODIFIER | c.-190-7155T>A | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 1/7 | chr1 | 160408493 | |||||||
| chr1:160408561 | G | C | 1 | a0001c0002t0032g0117 | 1 | HG02165.hp2 | intron_variant | MODIFIER | c.-190-7087G>C | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 1/7 | chr1 | 160408561 | |||||||
| chr1:160408670 | C | T | 8 | a0001c0001t0001g0017 a0001c0001t0001g0169 a0001c0001t0001g0171 others(5): Show |
13 | HG02258.hp2 HG02486.hp2 HG02572.hp1 others(10): Show |
intron_variant | MODIFIER | c.-190-6978C>T | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 1/7 | chr1 | 160408670 | |||||||
| chr1:160408683 | C | T | 1 | a0001c0001t0011g0024 | 3 | HG02895.hp2 HG03098.hp1 HG03195.hp2 |
intron_variant | MODIFIER | c.-190-6965C>T | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 1/7 | chr1 | 160408683 | |||||||
| chr1:160408684 | G | A | 1 | a0001c0008t0046g0109 | 1 | HG03239.hp1 | intron_variant | MODIFIER | c.-190-6964G>A | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 1/7 | chr1 | 160408684 | |||||||
| chr1:160408739 | C | G | 2 | a0001c0002t0002g0139 a0001c0002t0002g0140 |
2 | HG02523.hp1 NA18997.hp2 |
intron_variant | MODIFIER | c.-190-6909C>G | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 1/7 | chr1 | 160408739 | |||||||
| chr1:160408758 | G | C | 1 | a0001c0003t0001g0156 | 1 | HG02630.hp1 | intron_variant | MODIFIER | c.-190-6890G>C | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 1/7 | chr1 | 160408758 | |||||||
| chr1:160408820 | G | A | 5 | a0001c0002t0010g0019 a0001c0002t0010g0053 a0001c0002t0010g0054 others(2): Show |
7 | HG00438.hp1 HG02083.hp1 NA18940.hp1 others(4): Show |
intron_variant | MODIFIER | c.-190-6828G>A | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 1/7 | chr1 | 160408820 | |||||||
| chr1:160408905 | G | A | 1 | a0001c0001t0001g0157 | 1 | HG01516.hp1 | intron_variant | MODIFIER | c.-190-6743G>A | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 1/7 | chr1 | 160408905 | |||||||
| chr1:160408949 | T | C | 146 | a0001c0001t0001g0005 a0001c0001t0001g0015 a0001c0001t0001g0017 others(143): Show |
259 | HG00099.hp2 HG00140.hp1 HG00280.hp2 others(256): Show |
intron_variant | MODIFIER | c.-190-6699T>C | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 1/7 | chr1 | 160408949 | |||||||
| chr1:160409142 | C | T | 1 | a0001c0002t0002g0138 | 1 | NA19000.hp2 | intron_variant | MODIFIER | c.-190-6506C>T | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 1/7 | chr1 | 160409142 | |||||||
| chr1:160409178 | A | T | 2 | a0001c0001t0003g0078 a0001c0001t0003g0079 |
2 | NA18983.hp1 NA19062.hp2 |
intron_variant | MODIFIER | c.-190-6470A>T | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 1/7 | chr1 | 160409178 | |||||||
| chr1:160409190 | A | G | 9 | a0001c0001t0001g0017 a0001c0001t0001g0169 a0001c0001t0001g0171 others(6): Show |
15 | HG01884.hp2 HG02258.hp2 HG02486.hp2 others(12): Show |
intron_variant | MODIFIER | c.-190-6458A>G | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 1/7 | chr1 | 160409190 | |||||||
| chr1:160409251 | C | T | 5 | a0001c0002t0002g0012 a0001c0002t0002g0135 a0001c0002t0021g0012 others(2): Show |
8 | HG00544.hp2 HG02040.hp1 HG02080.hp1 others(5): Show |
intron_variant | MODIFIER | c.-190-6397C>T | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 1/7 | chr1 | 160409251 | |||||||
| chr1:160409379 | C | T | 1 | a0001c0003t0001g0108 | 1 | HG03225.hp2 | intron_variant | MODIFIER | c.-190-6269C>T | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 1/7 | chr1 | 160409379 | |||||||
| chr1:160409458 | A | G | 1 | a0001c0003t0005g0100 | 1 | HG00140.hp1 | intron_variant | MODIFIER | c.-190-6190A>G | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 1/7 | chr1 | 160409458 | |||||||
| chr1:160409569 | C | T | 1 | a0001c0004t0007g0086 | 1 | HG02723.hp1 | intron_variant | MODIFIER | c.-190-6079C>T | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 1/7 | chr1 | 160409569 | |||||||
| chr1:160409595 | G | T | 1 | a0001c0002t0002g0134 | 1 | HG02922.hp2 | intron_variant | MODIFIER | c.-190-6053G>T | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 1/7 | chr1 | 160409595 | |||||||
| chr1:160409785 | G | T | 47 | a0001c0001t0001g0031 a0001c0001t0001g0097 a0001c0001t0001g0157 others(44): Show |
95 | HG00099.hp2 HG00140.hp1 HG00280.hp2 others(92): Show |
intron_variant | MODIFIER | c.-190-5863G>T | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 1/7 | chr1 | 160409785 | |||||||
| chr1:160409926 | C | T | 47 | a0001c0001t0001g0031 a0001c0001t0001g0097 a0001c0001t0001g0157 others(44): Show |
95 | HG00099.hp2 HG00140.hp1 HG00280.hp2 others(92): Show |
intron_variant | MODIFIER | c.-190-5722C>T | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 1/7 | chr1 | 160409926 | |||||||
| chr1:160409969 | A | G | 1 | a0001c0002t0002g0099 | 1 | HG01928.hp1 | intron_variant | MODIFIER | c.-190-5679A>G | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 1/7 | chr1 | 160409969 | |||||||
| chr1:160410138 | A | G | 2 | a0001c0002t0002g0023 a0001c0002t0009g0023 |
3 | HG02273.hp2 HG02293.hp2 NA20300.hp1 |
intron_variant | MODIFIER | c.-190-5510A>G | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 1/7 | chr1 | 160410138 | |||||||
| chr1:160410139 | C | T | 1 | a0001c0003t0001g0098 | 1 | HG02004.hp2 | intron_variant | MODIFIER | c.-190-5509C>T | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 1/7 | chr1 | 160410139 | |||||||
| chr1:160410144 | A | C | 1 | a0001c0001t0003g0077 | 1 | NA19078.hp2 | intron_variant | MODIFIER | c.-190-5504A>C | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 1/7 | chr1 | 160410144 | |||||||
| chr1:160410224 | C | T | 1 | a0001c0001t0038g0147 | 1 | HG02970.hp2 | intron_variant | MODIFIER | c.-190-5424C>T | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 1/7 | chr1 | 160410224 | |||||||
| chr1:160410260 | C | T | 1 | a0001c0001t0003g0076 | 1 | NA18991.hp2 | intron_variant | MODIFIER | c.-190-5388C>T | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 1/7 | chr1 | 160410260 | |||||||
| chr1:160410291 | C | T | 1 | a0001c0003t0001g0030 | 2 | NA18995.hp1 NA19065.hp1 |
intron_variant | MODIFIER | c.-190-5357C>T | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 1/7 | chr1 | 160410291 | |||||||
| chr1:160410508 | G | A | 41 | a0001c0001t0003g0003 a0001c0001t0003g0011 a0001c0001t0003g0014 others(38): Show |
63 | HG00642.hp2 HG00673.hp1 HG00741.hp2 others(60): Show |
intron_variant | MODIFIER | c.-190-5140G>A | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 1/7 | chr1 | 160410508 | |||||||
| chr1:160410675 | T | TAC | 47 | a0001c0001t0001g0017 a0001c0001t0001g0106 a0001c0001t0003g0003 others(44): Show |
72 | HG00642.hp2 HG00673.hp1 HG00741.hp2 others(69): Show |
intron_variant | MODIFIER | c.-190-4950_-190-494 others(6): Show |
VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 1/7 | INFO_REALIGN_3_PRIME | chr1 | 160410675 | ||||||
| chr1:160410675 | T | TACACACA others(3): Show |
2 | a0001c0001t0001g0169 a0001c0001t0005g0048 |
3 | HG02486.hp2 HG03471.hp1 NA18522.hp1 |
intron_variant | MODIFIER | c.-190-4958_-190-494 others(14): Show |
VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 1/7 | INFO_REALIGN_3_PRIME | chr1 | 160410675 | ||||||
| chr1:160410675 | TAC | T | 23 | a0001c0001t0001g0005 a0001c0001t0001g0015 a0001c0001t0001g0018 others(20): Show |
50 | HG00423.hp2 HG00609.hp2 HG00642.hp1 others(47): Show |
intron_variant | MODIFIER | c.-190-4950_-190-494 others(6): Show |
VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 1/7 | INFO_REALIGN_3_PRIME | chr1 | 160410675 | ||||||
| chr1:160410692 | A | ACACGCAC others(1): Show |
6 | a0001c0002t0010g0019 a0001c0002t0010g0053 a0001c0002t0010g0054 others(3): Show |
8 | HG00438.hp1 HG02083.hp1 HG03239.hp1 others(5): Show |
intron_variant | MODIFIER | c.-190-4953_-190-495 others(12): Show |
VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 1/7 | INFO_REALIGN_3_PRIME | chr1 | 160410692 | ||||||
| chr1:160410696 | A | G | 7 | a0001c0002t0010g0019 a0001c0002t0010g0053 a0001c0002t0010g0054 others(4): Show |
9 | HG00438.hp1 HG02083.hp1 HG03239.hp1 others(6): Show |
intron_variant | MODIFIER | c.-190-4952A>G | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 1/7 | chr1 | 160410696 | |||||||
| chr1:160410696 | ACACG | A | 43 | a0001c0001t0001g0161 a0001c0001t0004g0006 a0001c0001t0004g0051 others(40): Show |
87 | HG00099.hp2 HG00140.hp1 HG00280.hp2 others(84): Show |
intron_variant | MODIFIER | c.-190-4936_-190-493 others(8): Show |
VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 1/7 | INFO_REALIGN_3_PRIME | chr1 | 160410696 | ||||||
| chr1:160410698 | ACG | A | 6 | a0001c0001t0001g0031 a0001c0001t0001g0157 a0001c0001t0001g0159 others(3): Show |
8 | HG00741.hp1 HG01516.hp1 HG02572.hp2 others(5): Show |
intron_variant | MODIFIER | c.-190-4948_-190-494 others(6): Show |
VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 1/7 | INFO_REALIGN_3_PRIME | chr1 | 160410698 | ||||||
| chr1:160410700 | G | A | 1 | a0001c0002t0002g0020 | 1 | HG03831.hp1 | intron_variant | MODIFIER | c.-190-4948G>A | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 1/7 | chr1 | 160410700 | |||||||
| chr1:160410712 | G | A | 1 | a0001c0001t0003g0061 | 1 | HG00673.hp1 | intron_variant | MODIFIER | c.-190-4936G>A | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 1/7 | chr1 | 160410712 | |||||||
| chr1:160411038 | C | A | 1 | a0001c0008t0046g0109 | 1 | HG03239.hp1 | intron_variant | MODIFIER | c.-190-4610C>A | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 1/7 | chr1 | 160411038 | |||||||
| chr1:160411056 | A | T | 1 | a0001c0002t0002g0133 | 1 | NA18747.hp1 | intron_variant | MODIFIER | c.-190-4592A>T | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 1/7 | chr1 | 160411056 | |||||||
| chr1:160411210 | G | A | 1 | a0001c0001t0001g0097 | 1 | HG02056.hp1 | intron_variant | MODIFIER | c.-190-4438G>A | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 1/7 | chr1 | 160411210 | |||||||
| chr1:160411311 | T | C | 2 | a0001c0001t0001g0169 a0001c0001t0005g0048 |
3 | HG02486.hp2 HG03471.hp1 NA18522.hp1 |
intron_variant | MODIFIER | c.-190-4337T>C | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 1/7 | chr1 | 160411311 | |||||||
| chr1:160411351 | T | C | 1 | a0001c0002t0002g0120 | 1 | HG01515.hp2 | intron_variant | MODIFIER | c.-190-4297T>C | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 1/7 | chr1 | 160411351 | |||||||
| chr1:160411394 | C | T | 1 | a0001c0002t0002g0115 | 1 | NA19078.hp1 | intron_variant | MODIFIER | c.-190-4254C>T | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 1/7 | chr1 | 160411394 | |||||||
| chr1:160411395 | T | C | 1 | a0001c0002t0002g0115 | 1 | NA19078.hp1 | intron_variant | MODIFIER | c.-190-4253T>C | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 1/7 | chr1 | 160411395 | |||||||
| chr1:160411401 | C | T | 1 | a0001c0001t0003g0073 | 1 | HG01928.hp2 | intron_variant | MODIFIER | c.-190-4247C>T | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 1/7 | chr1 | 160411401 | |||||||
| chr1:160411516 | C | A | 1 | a0001c0002t0002g0121 | 1 | NA19090.hp1 | intron_variant | MODIFIER | c.-190-4132C>A | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 1/7 | chr1 | 160411516 | |||||||
| chr1:160411701 | G | C | 19 | a0001c0001t0001g0106 a0001c0001t0001g0176 a0001c0001t0004g0009 others(16): Show |
24 | HG01109.hp2 HG02055.hp2 HG02145.hp1 others(21): Show |
intron_variant | MODIFIER | c.-190-3947G>C | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 1/7 | chr1 | 160411701 | |||||||
| chr1:160411780 | T | C | 1 | a0001c0002t0044g0056 | 1 | HG02083.hp1 | intron_variant | MODIFIER | c.-190-3868T>C | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 1/7 | chr1 | 160411780 | |||||||
| chr1:160411854 | G | A | 19 | a0001c0001t0001g0106 a0001c0001t0001g0176 a0001c0001t0004g0009 others(16): Show |
24 | HG01109.hp2 HG02055.hp2 HG02145.hp1 others(21): Show |
intron_variant | MODIFIER | c.-190-3794G>A | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 1/7 | chr1 | 160411854 | |||||||
| chr1:160411863 | G | GGT | 3 | a0001c0001t0006g0151 a0001c0002t0002g0115 a0001c0003t0001g0083 |
3 | HG01169.hp2 HG03453.hp1 NA19078.hp1 |
intron_variant | MODIFIER | c.-190-3768_-190-376 others(6): Show |
VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 1/7 | INFO_REALIGN_3_PRIME | chr1 | 160411863 | ||||||
| chr1:160411990 | G | C | 2 | a0001c0004t0007g0062 a0001c0004t0007g0063 |
2 | HG02886.hp2 HG03540.hp1 |
intron_variant | MODIFIER | c.-190-3658G>C | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 1/7 | chr1 | 160411990 | |||||||
| chr1:160412322 | G | A | 1 | a0001c0001t0003g0065 | 1 | NA18970.hp2 | intron_variant | MODIFIER | c.-190-3326G>A | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 1/7 | chr1 | 160412322 | |||||||
| chr1:160412400 | A | G | 24 | a0001c0001t0001g0005 a0001c0001t0001g0015 a0001c0001t0001g0018 others(21): Show |
50 | HG00423.hp2 HG00609.hp2 HG00642.hp1 others(47): Show |
intron_variant | MODIFIER | c.-190-3248A>G | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 1/7 | chr1 | 160412400 | |||||||
| chr1:160412469 | A | T | 1 | a0001c0002t0002g0121 | 1 | NA19090.hp1 | intron_variant | MODIFIER | c.-190-3179A>T | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 1/7 | chr1 | 160412469 | |||||||
| chr1:160412646 | C | T | 1 | a0001c0002t0002g0131 | 1 | HG01255.hp1 | intron_variant | MODIFIER | c.-190-3002C>T | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 1/7 | chr1 | 160412646 | |||||||
| chr1:160412653 | C | T | 1 | a0001c0001t0034g0107 | 1 | NA20300.hp2 | intron_variant | MODIFIER | c.-190-2995C>T | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 1/7 | chr1 | 160412653 | |||||||
| chr1:160412829 | G | A | 3 | a0001c0001t0003g0011 a0001c0001t0003g0073 a0001c0001t0027g0066 |
7 | HG01928.hp2 NA18971.hp2 NA18974.hp2 others(4): Show |
intron_variant | MODIFIER | c.-190-2819G>A | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 1/7 | chr1 | 160412829 | |||||||
| chr1:160412847 | T | C | 1 | a0001c0002t0008g0122 | 1 | HG01346.hp1 | intron_variant | MODIFIER | c.-190-2801T>C | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 1/7 | chr1 | 160412847 | |||||||
| chr1:160413013 | T | C | 47 | a0001c0001t0001g0157 a0001c0001t0001g0159 a0001c0001t0004g0006 others(44): Show |
94 | HG00099.hp2 HG00140.hp1 HG00280.hp2 others(91): Show |
intron_variant | MODIFIER | c.-190-2635T>C | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 1/7 | chr1 | 160413013 | |||||||
| chr1:160413029 | G | A | 1 | a0001c0001t0005g0048 | 2 | HG02486.hp2 NA18522.hp1 |
intron_variant | MODIFIER | c.-190-2619G>A | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 1/7 | chr1 | 160413029 | |||||||
| chr1:160413051 | T | G | 2 | a0001c0001t0001g0169 a0001c0001t0005g0048 |
3 | HG02486.hp2 HG03471.hp1 NA18522.hp1 |
intron_variant | MODIFIER | c.-190-2597T>G | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 1/7 | chr1 | 160413051 | |||||||
| chr1:160413054 | A | G | 18 | a0001c0001t0001g0106 a0001c0001t0001g0176 a0001c0001t0004g0009 others(15): Show |
23 | HG01109.hp2 HG02055.hp2 HG02145.hp1 others(20): Show |
intron_variant | MODIFIER | c.-190-2594A>G | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 1/7 | chr1 | 160413054 | |||||||
| chr1:160413082 | T | C | 6 | a0001c0001t0001g0157 a0001c0001t0004g0006 a0001c0001t0004g0051 others(3): Show |
12 | HG00597.hp1 HG01256.hp2 HG01258.hp1 others(9): Show |
intron_variant | MODIFIER | c.-190-2566T>C | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 1/7 | chr1 | 160413082 | |||||||
| chr1:160413260 | T | C | 131 | a0001c0001t0001g0005 a0001c0001t0001g0015 a0001c0001t0001g0018 others(128): Show |
234 | HG00099.hp2 HG00140.hp1 HG00280.hp2 others(231): Show |
intron_variant | MODIFIER | c.-190-2388T>C | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 1/7 | chr1 | 160413260 | |||||||
| chr1:160413284 | G | GT | 71 | a0001c0001t0001g0132 a0001c0001t0001g0155 a0001c0001t0001g0157 others(68): Show |
125 | HG00099.hp2 HG00140.hp1 HG00280.hp2 others(122): Show |
intron_variant | MODIFIER | c.-190-2350dupT | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 1/7 | INFO_REALIGN_3_PRIME | chr1 | 160413284 | ||||||
| chr1:160413309 | C | G | 47 | a0001c0001t0001g0157 a0001c0001t0001g0159 a0001c0001t0004g0006 others(44): Show |
94 | HG00099.hp2 HG00140.hp1 HG00280.hp2 others(91): Show |
intron_variant | MODIFIER | c.-190-2339C>G | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 1/7 | chr1 | 160413309 | |||||||
| chr1:160413466 | C | T | 1 | a0001c0002t0002g0096 | 1 | HG01361.hp1 | intron_variant | MODIFIER | c.-190-2182C>T | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 1/7 | chr1 | 160413466 | |||||||
| chr1:160413495 | C | G | 1 | a0001c0001t0001g0157 | 1 | HG01516.hp1 | intron_variant | MODIFIER | c.-190-2153C>G | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 1/7 | chr1 | 160413495 | |||||||
| chr1:160414483 | C | T | 2 | a0001c0001t0018g0072 a0001c0003t0001g0148 |
2 | HG00558.hp1 NA18982.hp2 |
intron_variant | MODIFIER | c.-190-1165C>T | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 1/7 | chr1 | 160414483 | |||||||
| chr1:160414531 | T | C | 1 | a0001c0003t0001g0089 | 1 | HG02735.hp2 | intron_variant | MODIFIER | c.-190-1117T>C | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 1/7 | chr1 | 160414531 | |||||||
| chr1:160414534 | C | T | 5 | a0001c0002t0002g0008 a0001c0002t0002g0041 a0001c0002t0002g0112 others(2): Show |
11 | HG00408.hp1 NA18747.hp1 NA18945.hp1 others(8): Show |
intron_variant | MODIFIER | c.-190-1114C>T | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 1/7 | chr1 | 160414534 | |||||||
| chr1:160414718 | A | C | 2 | a0001c0001t0005g0081 a0001c0003t0001g0082 |
2 | HG02615.hp2 HG03139.hp1 |
intron_variant | MODIFIER | c.-190-930A>C | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 1/7 | chr1 | 160414718 | |||||||
| chr1:160414801 | G | GCTCCTAT others(13): Show |
1 | a0001c0001t0003g0074 | 1 | NA20805.hp2 | intron_variant | MODIFIER | c.-190-845_-190-826d others(22): Show |
VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 1/7 | INFO_REALIGN_3_PRIME | chr1 | 160414801 | ||||||
| chr1:160414823 | G | A | 5 | a0001c0002t0010g0019 a0001c0002t0010g0053 a0001c0002t0010g0054 others(2): Show |
7 | HG00438.hp1 HG02083.hp1 NA18940.hp1 others(4): Show |
intron_variant | MODIFIER | c.-190-825G>A | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 1/7 | chr1 | 160414823 | |||||||
| chr1:160415052 | T | C | 2 | a0001c0001t0003g0067 a0001c0010t0018g0059 |
2 | HG03490.hp1 HG03491.hp2 |
intron_variant | MODIFIER | c.-190-596T>C | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 1/7 | chr1 | 160415052 | |||||||
| chr1:160415109 | G | A | 1 | a0001c0002t0002g0036 | 2 | HG01123.hp2 HG03942.hp2 |
intron_variant | MODIFIER | c.-190-539G>A | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 1/7 | chr1 | 160415109 | |||||||
| chr1:160415267 | C | T | 2 | a0001c0001t0005g0046 a0001c0001t0005g0164 |
3 | HG02145.hp2 HG02451.hp2 HG02976.hp2 |
intron_variant | MODIFIER | c.-190-381C>T | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 1/7 | chr1 | 160415267 | |||||||
| chr1:160415279 | G | C | 14 | a0001c0001t0004g0009 a0001c0001t0006g0009 a0001c0001t0023g0047 others(11): Show |
19 | HG01109.hp2 HG02055.hp2 HG02145.hp1 others(16): Show |
intron_variant | MODIFIER | c.-190-369G>C | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 1/7 | chr1 | 160415279 | |||||||
| chr1:160415314 | G | A | 3 | a0001c0002t0009g0033 a0001c0002t0009g0116 a0001c0005t0009g0037 |
5 | HG00735.hp2 HG01167.hp2 HG01169.hp1 others(2): Show |
intron_variant | MODIFIER | c.-190-334G>A | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 1/7 | chr1 | 160415314 | |||||||
| chr1:160415382 | A | G | 2 | a0001c0001t0001g0169 a0001c0001t0005g0048 |
3 | HG02486.hp2 HG03471.hp1 NA18522.hp1 |
intron_variant | MODIFIER | c.-190-266A>G | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 1/7 | chr1 | 160415382 | |||||||
| chr1:160415922 | C | T | 6 | a0001c0002t0010g0019 a0001c0002t0010g0053 a0001c0002t0010g0054 others(3): Show |
8 | HG00438.hp1 HG02083.hp1 HG03239.hp1 others(5): Show |
intron_variant | MODIFIER | c.71+14C>T | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 2/7 | chr1 | 160415922 | |||||||
| chr1:160415935 | G | T | 1 | a0001c0003t0001g0094 | 1 | HG02683.hp1 | intron_variant | MODIFIER | c.71+27G>T | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 2/7 | chr1 | 160415935 | |||||||
| chr1:160415974 | C | T | 1 | a0001c0002t0010g0055 | 1 | NA18979.hp1 | intron_variant | MODIFIER | c.71+66C>T | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 2/7 | chr1 | 160415974 | |||||||
| chr1:160416200 | G | A | 1 | a0001c0002t0002g0135 | 1 | HG02155.hp2 | intron_variant | MODIFIER | c.192+18G>A | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 3/7 | chr1 | 160416200 | |||||||
| chr1:160416201 | G | A | 2 | a0001c0001t0001g0031 a0001c0001t0020g0042 |
4 | HG01884.hp2 HG02647.hp1 HG03041.hp2 others(1): Show |
intron_variant | MODIFIER | c.192+19G>A | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 3/7 | chr1 | 160416201 | |||||||
| chr1:160416229 | C | T | 3 | a0001c0001t0001g0169 a0001c0001t0005g0048 a0001c0001t0045g0166 |
4 | HG02055.hp1 HG02486.hp2 HG03471.hp1 others(1): Show |
intron_variant | MODIFIER | c.192+47C>T | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 3/7 | chr1 | 160416229 | |||||||
| chr1:160416292 | A | G | 46 | a0001c0001t0001g0159 a0001c0001t0001g0171 a0001c0001t0038g0147 others(43): Show |
87 | HG00099.hp2 HG00140.hp1 HG00280.hp2 others(84): Show |
intron_variant | MODIFIER | c.192+110A>G | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 3/7 | chr1 | 160416292 | |||||||
| chr1:160416299 | C | T | 7 | a0001c0001t0004g0009 a0001c0001t0006g0009 a0001c0001t0023g0047 others(4): Show |
11 | HG02145.hp1 HG02258.hp1 HG02559.hp1 others(8): Show |
intron_variant | MODIFIER | c.192+117C>T | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 3/7 | chr1 | 160416299 | |||||||
| chr1:160416473 | C | T | 4 | a0001c0001t0023g0175 a0001c0002t0001g0013 a0001c0002t0001g0111 others(1): Show |
8 | HG01106.hp2 HG01891.hp1 HG02895.hp1 others(5): Show |
intron_variant | MODIFIER | c.192+291C>T | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 3/7 | chr1 | 160416473 | |||||||
| chr1:160416559 | A | T | 40 | a0001c0001t0001g0005 a0001c0001t0001g0015 a0001c0001t0001g0018 others(37): Show |
70 | HG00423.hp2 HG00609.hp2 HG00642.hp1 others(67): Show |
intron_variant | MODIFIER | c.192+377A>T | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 3/7 | chr1 | 160416559 | |||||||
| chr1:160416584 | A | G | 46 | a0001c0001t0001g0005 a0001c0001t0001g0015 a0001c0001t0001g0018 others(43): Show |
78 | HG00423.hp2 HG00438.hp1 HG00609.hp2 others(75): Show |
intron_variant | MODIFIER | c.192+402A>G | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 3/7 | chr1 | 160416584 | |||||||
| chr1:160416585 | C | T | 2 | a0001c0001t0001g0169 a0001c0001t0005g0048 |
3 | HG02486.hp2 HG03471.hp1 NA18522.hp1 |
intron_variant | MODIFIER | c.192+403C>T | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 3/7 | chr1 | 160416585 | |||||||
| chr1:160416662 | G | A | 1 | a0001c0001t0018g0072 | 1 | NA18982.hp2 | intron_variant | MODIFIER | c.192+480G>A | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 3/7 | chr1 | 160416662 | |||||||
| chr1:160416868 | C | T | 1 | a0001c0002t0002g0040 | 2 | HG00423.hp1 NA19010.hp1 |
intron_variant | MODIFIER | c.192+686C>T | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 3/7 | chr1 | 160416868 | |||||||
| chr1:160417117 | G | A | 1 | a0001c0007t0001g0101 | 1 | HG03688.hp1 | intron_variant | MODIFIER | c.192+935G>A | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 3/7 | chr1 | 160417117 | |||||||
| chr1:160417390 | G | T | 3 | a0001c0001t0001g0169 a0001c0001t0005g0048 a0001c0001t0045g0166 |
4 | HG02055.hp1 HG02486.hp2 HG03471.hp1 others(1): Show |
intron_variant | MODIFIER | c.192+1208G>T | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 3/7 | chr1 | 160417390 | |||||||
| chr1:160417650 | C | G | 1 | a0001c0001t0003g0071 | 1 | NA18986.hp2 | intron_variant | MODIFIER | c.193-1352C>G | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 3/7 | chr1 | 160417650 | |||||||
| chr1:160417801 | A | C | 39 | a0001c0001t0001g0159 a0001c0001t0038g0147 a0001c0002t0002g0141 others(36): Show |
79 | HG00099.hp2 HG00140.hp1 HG00280.hp2 others(76): Show |
intron_variant | MODIFIER | c.193-1201A>C | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 3/7 | chr1 | 160417801 | |||||||
| chr1:160417908 | A | AT | 69 | a0001c0001t0001g0017 a0001c0001t0001g0123 a0001c0001t0001g0128 others(66): Show |
141 | HG00140.hp2 HG00280.hp1 HG00408.hp1 others(138): Show |
intron_variant | MODIFIER | c.193-1074dupT | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 3/7 | INFO_REALIGN_3_PRIME | chr1 | 160417908 | ||||||
| chr1:160417908 | A | ATT | 9 | a0001c0001t0003g0014 a0001c0001t0016g0014 a0001c0001t0018g0072 others(6): Show |
11 | HG00735.hp2 HG01515.hp1 HG02055.hp1 others(8): Show |
intron_variant | MODIFIER | c.193-1075_193-1074d others(4): Show |
VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 3/7 | INFO_REALIGN_3_PRIME | chr1 | 160417908 | ||||||
| chr1:160417908 | A | ATTT | 37 | a0001c0001t0001g0161 a0001c0001t0003g0003 a0001c0001t0003g0011 others(34): Show |
65 | HG00099.hp1 HG00597.hp1 HG00639.hp2 others(62): Show |
intron_variant | MODIFIER | c.193-1076_193-1074d others(5): Show |
VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 3/7 | INFO_REALIGN_3_PRIME | chr1 | 160417908 | ||||||
| chr1:160417908 | AT | A | 64 | a0001c0001t0001g0005 a0001c0001t0001g0015 a0001c0001t0001g0018 others(61): Show |
128 | HG00099.hp2 HG00140.hp1 HG00408.hp2 others(125): Show |
intron_variant | MODIFIER | c.193-1074delT | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 3/7 | INFO_REALIGN_3_PRIME | chr1 | 160417908 | ||||||
| chr1:160417908 | ATT | A | 11 | a0001c0001t0001g0167 a0001c0001t0004g0009 a0001c0001t0005g0164 others(8): Show |
15 | HG00280.hp2 HG00423.hp2 HG02145.hp1 others(12): Show |
intron_variant | MODIFIER | c.193-1075_193-1074d others(4): Show |
VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 3/7 | INFO_REALIGN_3_PRIME | chr1 | 160417908 | ||||||
| chr1:160418085 | G | T | 45 | a0001c0001t0001g0005 a0001c0001t0001g0015 a0001c0001t0001g0018 others(42): Show |
75 | HG00423.hp2 HG00438.hp1 HG00609.hp2 others(72): Show |
intron_variant | MODIFIER | c.193-917G>T | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 3/7 | chr1 | 160418085 | |||||||
| chr1:160418141 | G | A | 25 | a0001c0001t0001g0005 a0001c0001t0001g0015 a0001c0001t0001g0018 others(22): Show |
48 | HG00423.hp2 HG00609.hp2 HG00642.hp1 others(45): Show |
intron_variant | MODIFIER | c.193-861G>A | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 3/7 | chr1 | 160418141 | |||||||
| chr1:160418149 | G | A | 38 | a0001c0001t0001g0005 a0001c0001t0001g0015 a0001c0001t0001g0018 others(35): Show |
66 | HG00423.hp2 HG00609.hp2 HG00642.hp1 others(63): Show |
intron_variant | MODIFIER | c.193-853G>A | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 3/7 | chr1 | 160418149 | |||||||
| chr1:160418157 | G | A | 7 | a0001c0004t0007g0027 a0001c0004t0007g0045 a0001c0004t0007g0062 others(4): Show |
8 | HG01109.hp2 HG02055.hp2 HG02257.hp2 others(5): Show |
intron_variant | MODIFIER | c.193-845G>A | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 3/7 | chr1 | 160418157 | |||||||
| chr1:160418167 | C | T | 6 | a0001c0002t0010g0019 a0001c0002t0010g0053 a0001c0002t0010g0054 others(3): Show |
8 | HG00438.hp1 HG02083.hp1 HG03239.hp1 others(5): Show |
intron_variant | MODIFIER | c.193-835C>T | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 3/7 | chr1 | 160418167 | |||||||
| chr1:160418236 | A | G | 1 | a0001c0001t0003g0070 | 1 | HG01167.hp1 | intron_variant | MODIFIER | c.193-766A>G | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 3/7 | chr1 | 160418236 | |||||||
| chr1:160418299 | C | A | 1 | a0001c0001t0001g0123 | 1 | HG02809.hp2 | intron_variant | MODIFIER | c.193-703C>A | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 3/7 | chr1 | 160418299 | |||||||
| chr1:160418345 | C | T | 1 | a0001c0001t0003g0067 | 1 | HG03491.hp2 | intron_variant | MODIFIER | c.193-657C>T | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 3/7 | chr1 | 160418345 | |||||||
| chr1:160418351 | C | T | 88 | a0001c0001t0001g0005 a0001c0001t0001g0015 a0001c0001t0001g0018 others(85): Show |
161 | HG00099.hp2 HG00140.hp1 HG00280.hp2 others(158): Show |
intron_variant | MODIFIER | c.193-651C>T | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 3/7 | chr1 | 160418351 | |||||||
| chr1:160418376 | G | C | 1 | a0001c0002t0037g0173 | 1 | HG02717.hp2 | intron_variant | MODIFIER | c.193-626G>C | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 3/7 | chr1 | 160418376 | |||||||
| chr1:160418458 | GT | G | 5 | a0001c0001t0001g0132 a0001c0002t0002g0139 a0001c0002t0010g0053 others(2): Show |
7 | HG02523.hp1 HG02572.hp1 HG02818.hp1 others(4): Show |
intron_variant | MODIFIER | c.193-532delT | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 3/7 | INFO_REALIGN_3_PRIME | chr1 | 160418458 | ||||||
| chr1:160418459 | T | G | 1 | a0001c0001t0045g0166 | 1 | HG02055.hp1 | intron_variant | MODIFIER | c.193-543T>G | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 3/7 | chr1 | 160418459 | |||||||
| chr1:160418580 | T | C | 88 | a0001c0001t0001g0005 a0001c0001t0001g0015 a0001c0001t0001g0018 others(85): Show |
161 | HG00099.hp2 HG00140.hp1 HG00280.hp2 others(158): Show |
intron_variant | MODIFIER | c.193-422T>C | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 3/7 | chr1 | 160418580 | |||||||
| chr1:160418607 | C | T | 1 | a0001c0002t0002g0177 | 1 | HG00733.hp1 | intron_variant | MODIFIER | c.193-395C>T | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 3/7 | chr1 | 160418607 | |||||||
| chr1:160418703 | G | T | 6 | a0001c0002t0010g0019 a0001c0002t0010g0053 a0001c0002t0010g0054 others(3): Show |
8 | HG00438.hp1 HG02083.hp1 HG03239.hp1 others(5): Show |
intron_variant | MODIFIER | c.193-299G>T | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 3/7 | chr1 | 160418703 | |||||||
| chr1:160418917 | C | T | 1 | a0001c0002t0010g0054 | 1 | NA18940.hp1 | intron_variant | MODIFIER | c.193-85C>T | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 3/7 | chr1 | 160418917 | |||||||
| chr1:160419622 | G | A | 1 | a0001c0003t0014g0124 | 1 | HG04199.hp1 | intron_variant | MODIFIER | c.800+13G>A | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 4/7 | chr1 | 160419622 | |||||||
| chr1:160419658 | G | A | 1 | a0001c0011t0028g0105 | 1 | HG02622.hp2 | intron_variant | MODIFIER | c.800+49G>A | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 4/7 | chr1 | 160419658 | |||||||
| chr1:160419823 | T | C | 1 | a0001c0001t0020g0042 | 2 | HG01884.hp2 HG03041.hp2 |
intron_variant | MODIFIER | c.800+214T>C | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 4/7 | chr1 | 160419823 | |||||||
| chr1:160419844 | G | T | 6 | a0001c0002t0010g0019 a0001c0002t0010g0053 a0001c0002t0010g0054 others(3): Show |
8 | HG00438.hp1 HG02083.hp1 HG03239.hp1 others(5): Show |
intron_variant | MODIFIER | c.800+235G>T | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 4/7 | chr1 | 160419844 | |||||||
| chr1:160419902 | G | C | 1 | a0001c0001t0004g0051 | 1 | NA20805.hp1 | intron_variant | MODIFIER | c.800+293G>C | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 4/7 | chr1 | 160419902 | |||||||
| chr1:160420102 | G | A | 2 | a0001c0001t0011g0024 a0001c0001t0011g0152 |
4 | HG02723.hp2 HG02895.hp2 HG03098.hp1 others(1): Show |
intron_variant | MODIFIER | c.801-309G>A | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 4/7 | chr1 | 160420102 | |||||||
| chr1:160420194 | A | G | 142 | a0001c0001t0001g0005 a0001c0001t0001g0015 a0001c0001t0001g0017 others(139): Show |
247 | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(244): Show |
intron_variant | MODIFIER | c.801-217A>G | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 4/7 | chr1 | 160420194 | |||||||
| chr1:160420273 | C | T | 6 | a0001c0001t0004g0009 a0001c0001t0006g0009 a0001c0001t0023g0047 others(3): Show |
10 | HG02145.hp1 HG02258.hp1 HG02559.hp1 others(7): Show |
intron_variant | MODIFIER | c.801-138C>T | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 4/7 | chr1 | 160420273 | |||||||
| chr1:160420857 | C | T | 3 | a0001c0001t0001g0015 a0001c0001t0001g0155 a0001c0001t0049g0015 |
5 | HG01891.hp2 HG03195.hp1 HG03453.hp2 others(2): Show |
intron_variant | MODIFIER | c.938-195C>T | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 5/7 | chr1 | 160420857 | |||||||
| chr1:160420910 | G | A | 1 | a0001c0003t0001g0089 | 1 | HG02735.hp2 | intron_variant | MODIFIER | c.938-142G>A | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 5/7 | chr1 | 160420910 | |||||||
| chr1:160421011 | C | T | 1 | a0001c0003t0001g0103 | 1 | NA18522.hp2 | intron_variant | MODIFIER | c.938-41C>T | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 5/7 | chr1 | 160421011 | |||||||
| chr1:160421209 | G | GGAGAGGA | 4 | a0001c0001t0001g0159 a0001c0001t0001g0169 a0001c0001t0005g0048 others(1): Show |
5 | HG02486.hp2 HG02970.hp2 HG03225.hp1 others(2): Show |
intron_variant | MODIFIER | c.1073+24_1073+30dup others(7): Show |
VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 6/7 | INFO_REALIGN_3_PRIME | chr1 | 160421209 | ||||||
| chr1:160421259 | C | A | 1 | a0001c0001t0001g0171 | 1 | HG03540.hp2 | intron_variant | MODIFIER | c.1073+72C>A | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 6/7 | chr1 | 160421259 | |||||||
| chr1:160421297 | T | C | 1 | a0001c0003t0001g0092 | 1 | NA18953.hp1 | intron_variant | MODIFIER | c.1073+110T>C | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 6/7 | chr1 | 160421297 | |||||||
| chr1:160421591 | C | T | 5 | a0001c0001t0001g0017 a0001c0001t0001g0171 a0001c0001t0022g0170 others(2): Show |
7 | HG02055.hp1 HG02258.hp2 HG02965.hp1 others(4): Show |
intron_variant | MODIFIER | c.1073+404C>T | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 6/7 | chr1 | 160421591 | |||||||
| chr1:160421608 | T | C | 142 | a0001c0001t0001g0005 a0001c0001t0001g0015 a0001c0001t0001g0017 others(139): Show |
246 | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(243): Show |
intron_variant | MODIFIER | c.1073+421T>C | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 6/7 | chr1 | 160421608 | |||||||
| chr1:160421748 | G | A | 1 | a0001c0011t0028g0105 | 1 | HG02622.hp2 | intron_variant | MODIFIER | c.1073+561G>A | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 6/7 | chr1 | 160421748 | |||||||
| chr1:160421785 | G | T | 54 | a0001c0001t0004g0009 a0001c0001t0006g0009 a0001c0001t0023g0047 others(51): Show |
99 | HG00099.hp2 HG00140.hp1 HG00280.hp2 others(96): Show |
intron_variant | MODIFIER | c.1073+598G>T | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 6/7 | chr1 | 160421785 | |||||||
| chr1:160421866 | T | A | 2 | a0001c0001t0004g0009 a0001c0001t0006g0009 |
6 | HG02145.hp1 HG02630.hp2 HG02818.hp2 others(3): Show |
intron_variant | MODIFIER | c.1073+679T>A | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 6/7 | chr1 | 160421866 | |||||||
| chr1:160421979 | T | G | 1 | a0001c0002t0002g0125 | 1 | HG00597.hp2 | intron_variant | MODIFIER | c.1073+792T>G | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 6/7 | chr1 | 160421979 | |||||||
| chr1:160421989 | A | G | 47 | a0001c0003t0001g0002 a0001c0003t0001g0004 a0001c0003t0001g0026 others(44): Show |
88 | HG00099.hp2 HG00140.hp1 HG00280.hp2 others(85): Show |
intron_variant | MODIFIER | c.1073+802A>G | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 6/7 | chr1 | 160421989 | |||||||
| chr1:160421999 | C | A | 1 | a0001c0001t0001g0169 | 1 | HG03471.hp1 | intron_variant | MODIFIER | c.1073+812C>A | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 6/7 | chr1 | 160421999 | |||||||
| chr1:160422008 | A | G | 2 | a0001c0002t0002g0022 a0001c0002t0002g0119 |
4 | HG02071.hp2 NA18950.hp2 NA19079.hp1 others(1): Show |
intron_variant | MODIFIER | c.1073+821A>G | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 6/7 | chr1 | 160422008 | |||||||
| chr1:160422096 | C | T | 6 | a0001c0002t0010g0019 a0001c0002t0010g0053 a0001c0002t0010g0054 others(3): Show |
8 | HG00438.hp1 HG02083.hp1 HG03239.hp1 others(5): Show |
intron_variant | MODIFIER | c.1073+909C>T | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 6/7 | chr1 | 160422096 | |||||||
| chr1:160422097 | G | A | 5 | a0001c0001t0001g0017 a0001c0001t0001g0171 a0001c0001t0022g0170 others(2): Show |
7 | HG02055.hp1 HG02258.hp2 HG02965.hp1 others(4): Show |
intron_variant | MODIFIER | c.1073+910G>A | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 6/7 | chr1 | 160422097 | |||||||
| chr1:160422111 | C | T | 6 | a0001c0001t0005g0025 a0001c0001t0005g0046 a0001c0001t0005g0081 others(3): Show |
10 | HG01884.hp2 HG02145.hp2 HG02280.hp2 others(7): Show |
intron_variant | MODIFIER | c.1073+924C>T | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 6/7 | chr1 | 160422111 | |||||||
| chr1:160422321 | G | A | 1 | a0001c0001t0003g0069 | 1 | NA19070.hp2 | intron_variant | MODIFIER | c.1073+1134G>A | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 6/7 | chr1 | 160422321 | |||||||
| chr1:160422364 | A | G | 47 | a0001c0003t0001g0002 a0001c0003t0001g0004 a0001c0003t0001g0026 others(44): Show |
88 | HG00099.hp2 HG00140.hp1 HG00280.hp2 others(85): Show |
intron_variant | MODIFIER | c.1073+1177A>G | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 6/7 | chr1 | 160422364 | |||||||
| chr1:160422397 | T | G | 6 | a0001c0002t0010g0019 a0001c0002t0010g0053 a0001c0002t0010g0054 others(3): Show |
8 | HG00438.hp1 HG02083.hp1 HG03239.hp1 others(5): Show |
intron_variant | MODIFIER | c.1073+1210T>G | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 6/7 | chr1 | 160422397 | |||||||
| chr1:160422555 | T | TCAAGTTC others(1): Show |
54 | a0001c0001t0004g0009 a0001c0001t0006g0009 a0001c0001t0023g0047 others(51): Show |
99 | HG00099.hp2 HG00140.hp1 HG00280.hp2 others(96): Show |
intron_variant | MODIFIER | c.1073+1370_1073+137 others(12): Show |
VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 6/7 | INFO_REALIGN_3_PRIME | chr1 | 160422555 | ||||||
| chr1:160422574 | A | G | 2 | a0001c0002t0002g0007 a0001c0002t0002g0146 |
8 | NA18939.hp1 NA18991.hp1 NA18993.hp2 others(5): Show |
intron_variant | MODIFIER | c.1073+1387A>G | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 6/7 | chr1 | 160422574 | |||||||
| chr1:160422603 | T | C | 54 | a0001c0001t0004g0009 a0001c0001t0006g0009 a0001c0001t0023g0047 others(51): Show |
99 | HG00099.hp2 HG00140.hp1 HG00280.hp2 others(96): Show |
intron_variant | MODIFIER | c.1073+1416T>C | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 6/7 | chr1 | 160422603 | |||||||
| chr1:160422729 | A | G | 1 | a0001c0002t0002g0127 | 1 | NA19065.hp2 | intron_variant | MODIFIER | c.1074-1323A>G | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 6/7 | chr1 | 160422729 | |||||||
| chr1:160422904 | CTT | C | 53 | a0001c0001t0004g0009 a0001c0001t0006g0009 a0001c0001t0023g0047 others(50): Show |
98 | HG00099.hp2 HG00140.hp1 HG00280.hp2 others(95): Show |
intron_variant | MODIFIER | c.1074-1133_1074-113 others(6): Show |
VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 6/7 | INFO_REALIGN_3_PRIME | chr1 | 160422904 | ||||||
| chr1:160422992 | G | A | 54 | a0001c0001t0004g0009 a0001c0001t0006g0009 a0001c0001t0023g0047 others(51): Show |
99 | HG00099.hp2 HG00140.hp1 HG00280.hp2 others(96): Show |
intron_variant | MODIFIER | c.1074-1060G>A | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 6/7 | chr1 | 160422992 | |||||||
| chr1:160423074 | T | G | 1 | a0001c0001t0003g0078 | 1 | NA19062.hp2 | intron_variant | MODIFIER | c.1074-978T>G | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 6/7 | chr1 | 160423074 | |||||||
| chr1:160423169 | G | A | 6 | a0001c0002t0010g0019 a0001c0002t0010g0053 a0001c0002t0010g0054 others(3): Show |
8 | HG00438.hp1 HG02083.hp1 HG03239.hp1 others(5): Show |
intron_variant | MODIFIER | c.1074-883G>A | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 6/7 | chr1 | 160423169 | |||||||
| chr1:160423709 | T | A | 1 | a0001c0001t0003g0078 | 1 | NA19062.hp2 | intron_variant | MODIFIER | c.1074-343T>A | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 6/7 | chr1 | 160423709 | |||||||
| chr1:160423906 | G | A | 2 | a0001c0002t0002g0125 a0001c0002t0002g0126 |
2 | HG00597.hp2 HG02040.hp2 |
intron_variant | MODIFIER | c.1074-146G>A | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 6/7 | chr1 | 160423906 | |||||||
| chr1:160423934 | T | C | 4 | a0001c0001t0001g0031 a0001c0001t0001g0106 a0001c0001t0001g0176 others(1): Show |
5 | HG02647.hp1 HG03486.hp2 HG03579.hp2 others(2): Show |
intron_variant | MODIFIER | c.1074-118T>C | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 6/7 | chr1 | 160423934 | |||||||
| chr1:160424321 | C | T | 1 | a0001c0001t0027g0066 | 1 | NA18992.hp2 | intron_variant | MODIFIER | c.1305+38C>T | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 7/7 | chr1 | 160424321 | |||||||
| chr1:160424365 | CT | C | 19 | a0001c0001t0001g0005 a0001c0001t0001g0015 a0001c0001t0001g0018 others(16): Show |
39 | HG00423.hp2 HG00609.hp2 HG00642.hp1 others(36): Show |
intron_variant | MODIFIER | c.1305+83delT | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 7/7 | chr1 | 160424365 | |||||||
| chr1:160424383 | A | G | 59 | a0001c0001t0001g0159 a0001c0001t0001g0169 a0001c0001t0004g0009 others(56): Show |
105 | HG00099.hp2 HG00140.hp1 HG00280.hp2 others(102): Show |
intron_variant | MODIFIER | c.1305+100A>G | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 7/7 | chr1 | 160424383 | |||||||
| chr1:160424518 | C | A | 1 | a0001c0002t0002g0120 | 1 | HG01515.hp2 | intron_variant | MODIFIER | c.1305+235C>A | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 7/7 | chr1 | 160424518 | |||||||
| chr1:160424551 | G | A | 2 | a0001c0001t0001g0017 a0001c0001t0036g0017 |
4 | HG02965.hp1 HG03041.hp1 HG03098.hp2 others(1): Show |
intron_variant | MODIFIER | c.1305+268G>A | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 7/7 | chr1 | 160424551 | |||||||
| chr1:160424644 | C | T | 1 | a0001c0010t0018g0059 | 1 | HG03490.hp1 | intron_variant | MODIFIER | c.1305+361C>T | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 7/7 | chr1 | 160424644 | |||||||
| chr1:160424877 | G | A | 10 | a0001c0003t0001g0002 a0001c0003t0001g0030 a0001c0003t0001g0088 others(7): Show |
33 | HG00408.hp2 HG00544.hp1 HG00558.hp1 others(30): Show |
intron_variant | MODIFIER | c.1306-241G>A | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 7/7 | chr1 | 160424877 | |||||||
| chr1:160425010 | G | C | 1 | a0001c0001t0001g0018 | 4 | NA18948.hp2 NA18985.hp2 NA18988.hp1 others(1): Show |
intron_variant | MODIFIER | c.1306-108G>C | VANGL2 | ENSG00000162738.7 | transcript | ENST00000368061.3 | protein_coding | 7/7 | chr1 | 160425010 |