Joint Open Genome and Omics Platform (JoGo)

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Item	Value
geneid	170627
ensemblid	ENSG00000171405.14
hgncid	30930
symbol	XAGE5
name	X antigen family member 5
refseq_nuc	NM_001386970.1
refseq_prot	NP_001373899.1
ensembl_nuc	ENST00000375501.2
ensembl_prot	ENSP00000364651.1
mane_status	MANE Select
chr	chrX
start	52811287
end	52818301
strand	+
ver	v1.2
region	chrX:52811287-52818301
region5000	chrX:52806287-52823301
regionname0	XAGE5_chrX_52811287_52818301
regionname5000	XAGE5_chrX_52806287_52823301

ahapid	grch38/ chm13v2	alen	total	AFR	AMR	EAS	EUR	SAS	JPT	regionname	genename	aa	chr	start	end
a0001	1/1	108	265	66	48	114	11	24	85	XAGE5_chrX_52806287_52823301	XAGE5	MSWRG others(103): Show MSWRGRRYRPRRCLRLAQLVGPMLEPSVPEPQQEEPPTESQDHTPGQKRE DDQGAAEIQVPNLEADLQELSQSKTGDECGDSPDVQGKILPKSEQFKMPE GGEGKPQL	chrX	52806287	52823301

achapid	grch38/ chm13v2	alen	clen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	aseq	cseq	chr	start	end
a0001c0001	1/1		324	263	66	48	114	11	22	XAGE5_chrX_52806287_52823301	XAGE5		ATGAG others(319): Show ATGAGTTGGCGAGGAAGAAGATATAGACCAAGACGATGTTTACGACTTGC TCAGCTGGTTGGGCCTATGCTTGAGCCCAGTGTGCCAGAGCCTCAACAAG AAGAACCACCAACTGAAAGTCAGGATCATACACCTGGTCAGAAGAGAGAA GATGATCAGGGTGCAGCTGAGATTCAAGTGCCTAACCTGGAAGCTGATCT CCAGGAGCTGTCTCAGTCAAAGACTGGGGATGAATGCGGAGATAGTCCTG ATGTCCAGGGGAAGATTCTGCCAAAATCAGAGCAATTTAAAATGCCAGAA GGAGGGGAAGGGAAACCACAGCTT	chrX	52806287	52823301
a0001c0002	0/0		324	2	0	0	0	0	2	XAGE5_chrX_52806287_52823301	XAGE5		ATGAG others(319): Show ATGAGTTGGCGAGGAAGAAGATATAGACCAAGACGATGTTTACGACTTGC TCAGCTGGTTGGGCCTATGCTTGAGCCCAGTGTGCCAGAGCCTCAACAAG AAGAACCACCAACTGAAAGTCAGGATCATACACCTGGTCAGAAGAGAGAA GATGATCAGGGTGCAGCTGAGATTCAAGTGCCTAACCTGGAAGCTGATCT CCAGGAGCTGTCTCAGTCAAAGACTGGGGATGAATGTGGAGATAGTCCTG ATGTCCAGGGGAAGATTCTGCCAAAATCAGAGCAATTTAAAATGCCAGAA GGAGGGGAAGGGAAACCACAGCTT	chrX	52806287	52823301

acthapid	grch38 chm13v2	tlen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	tseq	chr	start	end
a0001c0001t0001	1/1	721	256	63	45	113	11	22	XAGE5_chrX_52806287_52823301	XAGE5	GCCAT others(716): Show GCCATTGGCCCTTCGCCCACCCGGGAGCTGTGATCCTGCACTTCGGGTCC CTGAGGTCTGGATTCTTTCTCCCCTACTGAGACGCAGCCAGTAGGTCCAC AGGCCGATCCAACTGGGAGTTGAAGTGGGTCAGGACGAAGGAAGAAGGAG GGCTTCGGAGTGCGACGGGGGTTAGGTGAAGCTGGGGCAATGCTGGGGTG CTGTTGGTGGTATTCCAGTCCCAGAAACGCCTGGAACTCCCAACAGAGGA CAAATTCCAGACTCCTCAAGGGACATCAAGGCTGGAATGTCGTGGACGAC TGAAATATGAGTTGGCGAGGAAGAAGATATAGACCAAGACGATGTTTACG ACTTGCTCAGCTGGTTGGGCCTATGCTTGAGCCCAGTGTGCCAGAGCCTC AACAAGAAGAACCACCAACTGAAAGTCAGGATCATACACCTGGTCAGAAG AGAGAAGATGATCAGGGTGCAGCTGAGATTCAAGTGCCTAACCTGGAAGC TGATCTCCAGGAGCTGTCTCAGTCAAAGACTGGGGATGAATGCGGAGATA GTCCTGATGTCCAGGGGAAGATTCTGCCAAAATCAGAGCAATTTAAAATG CCAGAAGGAGGGGAAGGGAAACCACAGCTTTAAACGAAGACAACCAAAAG AATGCAAACTGGATTTATCCGAGATATTTGACTTTTAAAAATCTCAATAA AGTTTTCCAGTTTTCTCCAAA	chrX	52806287	52823301
a0001c0001t0002	0/0	721	5	2	3	0	0	0	XAGE5_chrX_52806287_52823301	XAGE5	GCCAT others(716): Show GCCATTGGCCCTTCGCCCACCCGGGAGCTGTGATCCTGCACTTCGGGTCC CTGAGGTCTGGATTCTTTCTCCCCTACTGAGACGCAGCCAGTAGGTCCAC AGGCCGATCCAACTGGGAGTTGAAGTGGGTCAGGACGAAGGAAGAAGGAG GGCTTCGGAGTGCGACGGGGGTTAGGTGAAGCTGGGGCAATGCTGGGGTG CTGTTGGTGGTATTCCAGTCCCAGAAACGCCTGGAACTCCCAACAGAGGA CAAATTCCAGACTCCTCAAGGGACATCAAGGCTGGAATGTCATGGACGAC TGAAATATGAGTTGGCGAGGAAGAAGATATAGACCAAGACGATGTTTACG ACTTGCTCAGCTGGTTGGGCCTATGCTTGAGCCCAGTGTGCCAGAGCCTC AACAAGAAGAACCACCAACTGAAAGTCAGGATCATACACCTGGTCAGAAG AGAGAAGATGATCAGGGTGCAGCTGAGATTCAAGTGCCTAACCTGGAAGC TGATCTCCAGGAGCTGTCTCAGTCAAAGACTGGGGATGAATGCGGAGATA GTCCTGATGTCCAGGGGAAGATTCTGCCAAAATCAGAGCAATTTAAAATG CCAGAAGGAGGGGAAGGGAAACCACAGCTTTAAACGAAGACAACCAAAAG AATGCAAACTGGATTTATCCGAGATATTTGACTTTTAAAAATCTCAATAA AGTTTTCCAGTTTTCTCCAAA	chrX	52806287	52823301
a0001c0001t0003	0/0	721	1	0	0	1	0	0	XAGE5_chrX_52806287_52823301	XAGE5	GCCAT others(716): Show GCCATTGGCCCTTCGCCCACCCGGGAGCTGTGATCCTGCACTTCGGGTCC CTGAGGTCTGGATTCTTTCTCCCCTACTGAGACGCAGCCAGTAGGTCCAC AGGCCGATCCAACTGGGAGTTGAAGTGGGTCAGGACGAAGGAAGAAGGAG GGCTTCGGAGTGCGACGGGGGTTAGGTGAAGCTGGGGCAATGCTGGGGTG CTGTTGGTGGTATTCCAGTCCCAGAAACGCCTGGAACTCCCAACAGAGGA CAAATTCCAGACTCCTCAAGGGACATCAAGGCTGGAATGTCGTGGACGAC TGAAATATGAGTTGGCGAGGAAGAAGATATAGACCAAGACGATGTTTACG ACTTGCTCAGCTGGTTGGGCCTATGCTTGAGCCCAGTGTGCCAGAGCCTC AACAAGAAGAACCACCAACTGAAAGTCAGGATCATACACCTGGTCAGAAG AGAGAAGATGATCAGGGTGCAGCTGAGATTCAAGTGCCTAACCTGGAAGC TGATCTCCAGGAGCTGTCTCAGTCAAAGACTGGGGATGAATGCGGAGATA GTCCTGATGTCCAGGGGAAGATTCTGCCAAAATCAGAGCAATTTAAAATG CCAGAAGGAGGGGAAGGGAAACCACAGCTTTAAACGAAGACAACCAAAAG AATGCAAACTGGATTTATCCAAGATATTTGACTTTTAAAAATCTCAATAA AGTTTTCCAGTTTTCTCCAAA	chrX	52806287	52823301
a0001c0001t0004	0/0	721	1	1	0	0	0	0	XAGE5_chrX_52806287_52823301	XAGE5	GCCAT others(716): Show GCCATTGGCCCTTCGCCCACCCGGGAGCTGTGATCCTGCACTTCGGGTCC CTGAGGTCTGGATTCTTTCTCCCCTACTGAGACGCAGCCAGTAGGTCCAC AGGCCGATCCAACTGGGAGTTGAAGTGGGTCAGGACGAAGGAAGAAGGAG GGCTTCGGAGTGCGACGGGGGTTAGGTGAAGCTGGGGCAATGCTGGGGTG CTGTTGGTGGTATTCCAGTCCCAGAAACGCCTGGAACTCCCAACAGAGGA CAAATTCCAGACTCCTCAAGGGACATCAAGGCTGGAATGTCGTGGACGAC TGAAATATGAGTTGGCGAGGAAGAAGATATAGACCAAGACGATGTTTACG ACTTGCTCAGCTGGTTGGGCCTATGCTTGAGCCCAGTGTGCCAGAGCCTC AACAAGAAGAACCACCAACTGAAAGTCAGGATCATACACCTGGTCAGAAG AGAGAAGATGATCAGGGTGCAGCTGAGATTCAAGTGCCTAACCTGGAAGC TGATCTCCAGGAGCTGTCTCAGTCAAAGACTGGGGATGAATGCGGAGATA GTCCTGATGTCCAGGGGAAGATTCTGCCAAAATCAGAGCAATTTAAAATG CCAGAAGGAGGGGAAGGGAAACCACAGCTTTAAACGAAGACAACCAAAAG AATGCAAACTGGATTTATCCGAGATATTTGACTCTTAAAAATCTCAATAA AGTTTTCCAGTTTTCTCCAAA	chrX	52806287	52823301
a0001c0002t0001	0/0	721	2	0	0	0	0	2	XAGE5_chrX_52806287_52823301	XAGE5	GCCAT others(716): Show GCCATTGGCCCTTCGCCCACCCGGGAGCTGTGATCCTGCACTTCGGGTCC CTGAGGTCTGGATTCTTTCTCCCCTACTGAGACGCAGCCAGTAGGTCCAC AGGCCGATCCAACTGGGAGTTGAAGTGGGTCAGGACGAAGGAAGAAGGAG GGCTTCGGAGTGCGACGGGGGTTAGGTGAAGCTGGGGCAATGCTGGGGTG CTGTTGGTGGTATTCCAGTCCCAGAAACGCCTGGAACTCCCAACAGAGGA CAAATTCCAGACTCCTCAAGGGACATCAAGGCTGGAATGTCGTGGACGAC TGAAATATGAGTTGGCGAGGAAGAAGATATAGACCAAGACGATGTTTACG ACTTGCTCAGCTGGTTGGGCCTATGCTTGAGCCCAGTGTGCCAGAGCCTC AACAAGAAGAACCACCAACTGAAAGTCAGGATCATACACCTGGTCAGAAG AGAGAAGATGATCAGGGTGCAGCTGAGATTCAAGTGCCTAACCTGGAAGC TGATCTCCAGGAGCTGTCTCAGTCAAAGACTGGGGATGAATGTGGAGATA GTCCTGATGTCCAGGGGAAGATTCTGCCAAAATCAGAGCAATTTAAAATG CCAGAAGGAGGGGAAGGGAAACCACAGCTTTAAACGAAGACAACCAAAAG AATGCAAACTGGATTTATCCGAGATATTTGACTTTTAAAAATCTCAATAA AGTTTTCCAGTTTTCTCCAAA	chrX	52806287	52823301

actghapid	grch38/ chm13v2	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	chr	start	end
a0001c0001t0001g0001	1/0	182	37	29	90	8	17	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
a0001c0001t0001g0002	0/0	22	18	4	0	0	0	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
a0001c0001t0001g0003	0/0	15	0	5	6	2	2	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
a0001c0001t0001g0004	0/0	4	0	0	4	0	0	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
a0001c0001t0001g0005	0/0	4	0	0	4	0	0	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
a0001c0001t0001g0006	0/0	1	0	1	0	0	0	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
a0001c0001t0001g0007	0/0	2	2	0	0	0	0	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
a0001c0001t0001g0008	0/0	2	0	0	0	0	2	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
a0001c0001t0001g0009	0/0	2	0	0	2	0	0	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
a0001c0001t0001g0010	0/0	2	2	0	0	0	0	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
a0001c0001t0001g0011	0/0	2	0	0	2	0	0	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
a0001c0001t0001g0013	0/0	1	0	1	0	0	0	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
a0001c0001t0001g0014	0/0	1	0	1	0	0	0	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
a0001c0001t0001g0015	0/0	1	0	0	1	0	0	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
a0001c0001t0001g0016	0/0	1	1	0	0	0	0	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
a0001c0001t0001g0017	0/0	1	0	1	0	0	0	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
a0001c0001t0001g0018	0/0	1	0	1	0	0	0	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
a0001c0001t0001g0019	0/0	1	0	0	1	0	0	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
a0001c0001t0001g0020	0/0	1	0	0	0	1	0	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
a0001c0001t0001g0021	0/0	1	0	0	1	0	0	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
a0001c0001t0001g0022	0/0	1	0	0	0	0	1	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
a0001c0001t0001g0023	0/0	1	0	1	0	0	0	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
a0001c0001t0001g0024	0/0	1	0	1	0	0	0	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
a0001c0001t0001g0025	0/0	1	0	0	1	0	0	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
a0001c0001t0001g0026	0/0	1	1	0	0	0	0	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
a0001c0001t0001g0027	0/0	1	0	0	1	0	0	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
a0001c0001t0001g0029	0/1	1	0	0	0	0	0	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
a0001c0001t0001g0030	0/0	1	1	0	0	0	0	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
a0001c0001t0001g0031	0/0	1	1	0	0	0	0	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
a0001c0001t0002g0006	0/0	3	0	3	0	0	0	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
a0001c0001t0002g0012	0/0	2	2	0	0	0	0	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
a0001c0001t0003g0001	0/0	1	0	0	1	0	0	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
a0001c0001t0004g0028	0/0	1	1	0	0	0	0	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
a0001c0002t0001g0001	0/0	2	0	0	0	0	2	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301

sampleid	ID haplotypeid	ahapid	chapid	thapid	ghapid	gpopname	popname	regionname	genename	chr	start	end
HG00099	hp1	a0001	c0001	t0001	g0001	EUR	GBR	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
HG00099	hp2	a0001	c0001	t0001	g0001	EUR	GBR	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
HG00140	hp1	a0001	c0001	t0001	g0001	EUR	GBR	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
HG00280	hp1	a0001	c0001	t0001	g0003	EUR	FIN	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
HG00323	hp1	a0001	c0001	t0001	g0001	EUR	FIN	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
HG00323	hp2	a0001	c0001	t0001	g0001	EUR	FIN	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
HG00408	hp1	a0001	c0001	t0001	g0015	EAS	CHS	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
HG00408	hp2	a0001	c0001	t0001	g0001	EAS	CHS	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
HG00423	hp1	a0001	c0001	t0001	g0001	EAS	CHS	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
HG00423	hp2	a0001	c0001	t0001	g0001	EAS	CHS	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
HG00438	hp1	a0001	c0001	t0001	g0001	EAS	CHS	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
HG00438	hp2	a0001	c0001	t0001	g0001	EAS	CHS	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
HG00544	hp1	a0001	c0001	t0001	g0001	EAS	CHS	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
HG00544	hp2	a0001	c0001	t0001	g0004	EAS	CHS	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
HG00558	hp1	a0001	c0001	t0001	g0019	EAS	CHS	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
HG00558	hp2	a0001	c0001	t0001	g0001	EAS	CHS	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
HG00597	hp1	a0001	c0001	t0001	g0001	EAS	CHS	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
HG00597	hp2	a0001	c0001	t0001	g0004	EAS	CHS	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
HG00609	hp1	a0001	c0001	t0001	g0001	EAS	CHS	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
HG00621	hp1	a0001	c0001	t0001	g0001	EAS	CHS	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
HG00639	hp1	a0001	c0001	t0001	g0003	AMR	PUR	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
HG00639	hp2	a0001	c0001	t0001	g0006	AMR	PUR	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
HG00642	hp1	a0001	c0001	t0001	g0001	AMR	PUR	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
HG00673	hp1	a0001	c0001	t0001	g0001	EAS	CHS	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
HG00735	hp1	a0001	c0001	t0001	g0001	AMR	PUR	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
HG00735	hp2	a0001	c0001	t0001	g0001	AMR	PUR	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
HG00738	hp1	a0001	c0001	t0001	g0002	AMR	PUR	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
HG00741	hp1	a0001	c0001	t0001	g0003	AMR	PUR	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
HG00741	hp2	a0001	c0001	t0001	g0001	AMR	PUR	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
HG01069	hp1	a0001	c0001	t0001	g0001	AMR	PUR	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
HG01074	hp1	a0001	c0001	t0001	g0023	AMR	PUR	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
HG01081	hp1	a0001	c0001	t0001	g0001	AMR	PUR	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
HG01081	hp2	a0001	c0001	t0001	g0002	AMR	PUR	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
HG01099	hp1	a0001	c0001	t0001	g0001	AMR	PUR	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
HG01106	hp1	a0001	c0001	t0001	g0001	AMR	PUR	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
HG01109	hp1	a0001	c0001	t0001	g0001	AMR	PUR	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
HG01167	hp1	a0001	c0001	t0001	g0001	AMR	PUR	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
HG01168	hp1	a0001	c0001	t0001	g0001	AMR	PUR	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
HG01168	hp2	a0001	c0001	t0001	g0013	AMR	PUR	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
HG01175	hp1	a0001	c0001	t0001	g0001	AMR	PUR	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
HG01175	hp2	a0001	c0001	t0001	g0017	AMR	PUR	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
HG01192	hp1	a0001	c0001	t0001	g0001	AMR	PUR	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
HG01243	hp1	a0001	c0001	t0001	g0002	AMR	PUR	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
HG01255	hp1	a0001	c0001	t0001	g0014	AMR	CLM	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
HG01256	hp1	a0001	c0001	t0001	g0001	AMR	CLM	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
HG01258	hp1	a0001	c0001	t0001	g0001	AMR	CLM	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
HG01261	hp1	a0001	c0001	t0001	g0001	AMR	CLM	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
HG01346	hp1	a0001	c0001	t0001	g0003	AMR	CLM	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
HG01346	hp2	a0001	c0001	t0001	g0001	AMR	CLM	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
HG01358	hp1	a0001	c0001	t0001	g0003	AMR	CLM	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
HG01361	hp1	a0001	c0001	t0001	g0003	AMR	CLM	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
HG01361	hp2	a0001	c0001	t0001	g0001	AMR	CLM	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
HG01433	hp1	a0001	c0001	t0001	g0018	AMR	CLM	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
HG01496	hp1	a0001	c0001	t0002	g0006	AMR	CLM	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
HG01496	hp2	a0001	c0001	t0001	g0001	AMR	CLM	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
HG01515	hp1	a0001	c0001	t0001	g0001	EUR	IBS	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
HG01516	hp1	a0001	c0001	t0001	g0001	EUR	IBS	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
HG01516	hp2	a0001	c0001	t0001	g0003	EUR	IBS	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
HG01884	hp1	a0001	c0001	t0001	g0002	AFR	ACB	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
HG01884	hp2	a0001	c0001	t0001	g0001	AFR	ACB	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
HG01928	hp1	a0001	c0001	t0001	g0001	AMR	PEL	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
HG01934	hp1	a0001	c0001	t0001	g0002	AMR	PEL	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
HG01943	hp1	a0001	c0001	t0001	g0001	AMR	PEL	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
HG01952	hp1	a0001	c0001	t0001	g0001	AMR	PEL	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
HG01978	hp1	a0001	c0001	t0002	g0006	AMR	PEL	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
HG01978	hp2	a0001	c0001	t0001	g0001	AMR	PEL	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
HG01981	hp1	a0001	c0001	t0002	g0006	AMR	PEL	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
HG01981	hp2	a0001	c0001	t0001	g0001	AMR	PEL	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
HG02015	hp1	a0001	c0001	t0001	g0001	EAS	KHV	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
HG02027	hp1	a0001	c0001	t0001	g0011	EAS	KHV	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
HG02040	hp1	a0001	c0001	t0001	g0005	EAS	KHV	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
HG02055	hp1	a0001	c0001	t0001	g0001	AFR	ACB	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
HG02056	hp1	a0001	c0001	t0001	g0001	EAS	KHV	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
HG02071	hp1	a0001	c0001	t0001	g0001	EAS	KHV	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
HG02074	hp1	a0001	c0001	t0001	g0003	EAS	KHV	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
HG02080	hp1	a0001	c0001	t0001	g0025	EAS	KHV	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
HG02080	hp2	a0001	c0001	t0001	g0001	EAS	KHV	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
HG02083	hp1	a0001	c0001	t0001	g0001	EAS	KHV	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
HG02129	hp1	a0001	c0001	t0001	g0001	EAS	KHV	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
HG02132	hp1	a0001	c0001	t0001	g0001	EAS	KHV	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
HG02135	hp1	a0001	c0001	t0001	g0001	EAS	KHV	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
HG02145	hp1	a0001	c0001	t0001	g0001	AFR	ACB	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
HG02257	hp1	a0001	c0001	t0001	g0001	AFR	ACB	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
HG02257	hp2	a0001	c0001	t0001	g0001	AFR	ACB	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
HG02258	hp1	a0001	c0001	t0002	g0012	AFR	ACB	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
HG02273	hp1	a0001	c0001	t0001	g0024	AMR	PEL	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
HG02273	hp2	a0001	c0001	t0001	g0001	AMR	PEL	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
HG02280	hp1	a0001	c0001	t0001	g0002	AFR	ACB	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
HG02280	hp2	a0001	c0001	t0001	g0001	AFR	ACB	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
HG02293	hp1	a0001	c0001	t0001	g0001	AMR	PEL	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
HG02293	hp2	a0001	c0001	t0001	g0001	AMR	PEL	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
HG02451	hp1	a0001	c0001	t0001	g0001	AFR	ACB	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
HG02451	hp2	a0001	c0001	t0001	g0001	AFR	ACB	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
HG02572	hp1	a0001	c0001	t0001	g0001	AFR	GWD	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
HG02602	hp1	a0001	c0001	t0001	g0001	SAS	PJL	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
HG02615	hp1	a0001	c0001	t0001	g0016	AFR	GWD	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
HG02615	hp2	a0001	c0001	t0001	g0001	AFR	GWD	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
HG02622	hp1	a0001	c0001	t0001	g0001	AFR	GWD	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
HG02622	hp2	a0001	c0001	t0001	g0001	AFR	GWD	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
HG02630	hp1	a0001	c0001	t0001	g0007	AFR	GWD	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
HG02630	hp2	a0001	c0001	t0001	g0002	AFR	GWD	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
HG02647	hp1	a0001	c0001	t0001	g0001	AFR	GWD	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
HG02683	hp1	a0001	c0002	t0001	g0001	SAS	PJL	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
HG02683	hp2	a0001	c0001	t0001	g0001	SAS	PJL	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
HG02698	hp1	a0001	c0001	t0001	g0001	SAS	PJL	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
HG02717	hp1	a0001	c0001	t0001	g0002	AFR	GWD	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
HG02735	hp1	a0001	c0001	t0001	g0008	SAS	PJL	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
HG02738	hp1	a0001	c0001	t0001	g0001	SAS	PJL	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
HG02809	hp1	a0001	c0001	t0001	g0001	AFR	GWD	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
HG02809	hp2	a0001	c0001	t0002	g0012	AFR	GWD	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
HG02818	hp1	a0001	c0001	t0001	g0002	AFR	GWD	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
HG02818	hp2	a0001	c0001	t0001	g0001	AFR	GWD	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
HG02886	hp1	a0001	c0001	t0001	g0001	AFR	GWD	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
HG02886	hp2	a0001	c0001	t0001	g0007	AFR	GWD	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
HG02895	hp1	a0001	c0001	t0001	g0002	AFR	GWD	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
HG02896	hp1	a0001	c0001	t0001	g0001	AFR	GWD	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
HG02896	hp2	a0001	c0001	t0001	g0002	AFR	GWD	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
HG02922	hp1	a0001	c0001	t0001	g0001	AFR	ESN	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
HG02922	hp2	a0001	c0001	t0001	g0001	AFR	ESN	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
HG02965	hp1	a0001	c0001	t0001	g0001	AFR	ESN	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
HG02970	hp1	a0001	c0001	t0001	g0001	AFR	ESN	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
HG02970	hp2	a0001	c0001	t0001	g0002	AFR	ESN	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
HG02976	hp1	a0001	c0001	t0001	g0002	AFR	ESN	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
HG02976	hp2	a0001	c0001	t0001	g0002	AFR	ESN	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
HG03017	hp1	a0001	c0002	t0001	g0001	SAS	PJL	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
HG03041	hp1	a0001	c0001	t0001	g0001	AFR	GWD	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
HG03041	hp2	a0001	c0001	t0001	g0010	AFR	GWD	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
HG03098	hp1	a0001	c0001	t0001	g0026	AFR	MSL	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
HG03130	hp1	a0001	c0001	t0001	g0001	AFR	ESN	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
HG03139	hp1	a0001	c0001	t0001	g0010	AFR	ESN	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
HG03195	hp1	a0001	c0001	t0001	g0001	AFR	ESN	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
HG03195	hp2	a0001	c0001	t0001	g0001	AFR	ESN	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
HG03209	hp1	a0001	c0001	t0001	g0002	AFR	MSL	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
HG03225	hp1	a0001	c0001	t0001	g0002	AFR	MSL	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
HG03453	hp1	a0001	c0001	t0001	g0001	AFR	MSL	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
HG03453	hp2	a0001	c0001	t0001	g0001	AFR	MSL	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
HG03486	hp1	a0001	c0001	t0001	g0002	AFR	MSL	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
HG03486	hp2	a0001	c0001	t0001	g0001	AFR	MSL	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
HG03490	hp1	a0001	c0001	t0001	g0001	SAS	PJL	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
HG03492	hp1	a0001	c0001	t0001	g0001	SAS	PJL	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
HG03540	hp1	a0001	c0001	t0001	g0002	AFR	GWD	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
HG03540	hp2	a0001	c0001	t0001	g0001	AFR	GWD	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
HG03579	hp1	a0001	c0001	t0001	g0002	AFR	MSL	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
HG03654	hp1	a0001	c0001	t0001	g0022	SAS	PJL	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
HG03669	hp1	a0001	c0001	t0001	g0001	SAS	PJL	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
HG03669	hp2	a0001	c0001	t0001	g0001	SAS	PJL	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
HG03688	hp1	a0001	c0001	t0001	g0001	SAS	STU	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
HG03704	hp1	a0001	c0001	t0001	g0001	SAS	PJL	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
HG03704	hp2	a0001	c0001	t0001	g0003	SAS	PJL	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
HG03710	hp1	a0001	c0001	t0001	g0001	SAS	PJL	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
HG03942	hp1	a0001	c0001	t0001	g0001	SAS	BEB	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
HG04115	hp1	a0001	c0001	t0001	g0001	SAS	STU	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
HG04184	hp1	a0001	c0001	t0001	g0001	SAS	BEB	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
HG04184	hp2	a0001	c0001	t0001	g0008	SAS	BEB	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
HG04199	hp1	a0001	c0001	t0001	g0001	SAS	STU	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
HG04204	hp1	a0001	c0001	t0001	g0001	SAS	STU	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
HG04228	hp1	a0001	c0001	t0001	g0003	SAS	STU	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
NA18522	hp1	a0001	c0001	t0001	g0001	AFR	YRI	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
NA18612	hp1	a0001	c0001	t0001	g0004	EAS	CHB	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
NA18747	hp1	a0001	c0001	t0001	g0001	EAS	CHB	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
NA18906	hp1	a0001	c0001	t0001	g0001	AFR	YRI	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
NA18906	hp2	a0001	c0001	t0001	g0002	AFR	YRI	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
NA18940	hp1	a0001	c0001	t0001	g0001	EAS	JPT	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
NA18942	hp1	a0001	c0001	t0001	g0001	EAS	JPT	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
NA18942	hp2	a0001	c0001	t0001	g0001	EAS	JPT	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
NA18943	hp1	a0001	c0001	t0001	g0005	EAS	JPT	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
NA18944	hp1	a0001	c0001	t0001	g0001	EAS	JPT	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
NA18945	hp1	a0001	c0001	t0001	g0003	EAS	JPT	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
NA18947	hp1	a0001	c0001	t0001	g0001	EAS	JPT	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
NA18947	hp2	a0001	c0001	t0001	g0005	EAS	JPT	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
NA18948	hp1	a0001	c0001	t0001	g0001	EAS	JPT	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
NA18949	hp1	a0001	c0001	t0001	g0001	EAS	JPT	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
NA18949	hp2	a0001	c0001	t0001	g0001	EAS	JPT	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
NA18951	hp1	a0001	c0001	t0001	g0001	EAS	JPT	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
NA18951	hp2	a0001	c0001	t0001	g0001	EAS	JPT	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
NA18952	hp1	a0001	c0001	t0001	g0001	EAS	JPT	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
NA18953	hp1	a0001	c0001	t0001	g0011	EAS	JPT	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
NA18957	hp1	a0001	c0001	t0001	g0001	EAS	JPT	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
NA18957	hp2	a0001	c0001	t0001	g0001	EAS	JPT	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
NA18959	hp1	a0001	c0001	t0001	g0009	EAS	JPT	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
NA18960	hp1	a0001	c0001	t0001	g0001	EAS	JPT	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
NA18961	hp1	a0001	c0001	t0001	g0001	EAS	JPT	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
NA18962	hp1	a0001	c0001	t0001	g0001	EAS	JPT	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
NA18965	hp1	a0001	c0001	t0001	g0001	EAS	JPT	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
NA18966	hp1	a0001	c0001	t0001	g0001	EAS	JPT	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
NA18967	hp1	a0001	c0001	t0001	g0001	EAS	JPT	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
NA18970	hp1	a0001	c0001	t0001	g0001	EAS	JPT	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
NA18971	hp1	a0001	c0001	t0001	g0001	EAS	JPT	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
NA18974	hp1	a0001	c0001	t0001	g0003	EAS	JPT	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
NA18975	hp1	a0001	c0001	t0001	g0027	EAS	JPT	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
NA18975	hp2	a0001	c0001	t0001	g0001	EAS	JPT	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
NA18977	hp1	a0001	c0001	t0001	g0001	EAS	JPT	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
NA18980	hp1	a0001	c0001	t0001	g0001	EAS	JPT	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
NA18980	hp2	a0001	c0001	t0001	g0003	EAS	JPT	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
NA18981	hp1	a0001	c0001	t0001	g0001	EAS	JPT	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
NA18981	hp2	a0001	c0001	t0001	g0005	EAS	JPT	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
NA18982	hp1	a0001	c0001	t0001	g0001	EAS	JPT	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
NA18983	hp1	a0001	c0001	t0001	g0001	EAS	JPT	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
NA18984	hp1	a0001	c0001	t0001	g0001	EAS	JPT	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
NA18986	hp1	a0001	c0001	t0001	g0001	EAS	JPT	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
NA18988	hp1	a0001	c0001	t0001	g0001	EAS	JPT	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
NA18989	hp1	a0001	c0001	t0001	g0001	EAS	JPT	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
NA18990	hp1	a0001	c0001	t0001	g0001	EAS	JPT	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
NA18991	hp1	a0001	c0001	t0003	g0001	EAS	JPT	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
NA18991	hp2	a0001	c0001	t0001	g0003	EAS	JPT	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
NA18994	hp1	a0001	c0001	t0001	g0001	EAS	JPT	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
NA18995	hp1	a0001	c0001	t0001	g0001	EAS	JPT	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
NA18999	hp1	a0001	c0001	t0001	g0001	EAS	JPT	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
NA18999	hp2	a0001	c0001	t0001	g0001	EAS	JPT	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
NA19000	hp1	a0001	c0001	t0001	g0001	EAS	JPT	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
NA19004	hp1	a0001	c0001	t0001	g0003	EAS	JPT	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
NA19005	hp1	a0001	c0001	t0001	g0004	EAS	JPT	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
NA19006	hp1	a0001	c0001	t0001	g0001	EAS	JPT	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
NA19007	hp1	a0001	c0001	t0001	g0001	EAS	JPT	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
NA19009	hp1	a0001	c0001	t0001	g0001	EAS	JPT	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
NA19010	hp1	a0001	c0001	t0001	g0001	EAS	JPT	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
NA19010	hp2	a0001	c0001	t0001	g0001	EAS	JPT	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
NA19011	hp1	a0001	c0001	t0001	g0001	EAS	JPT	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
NA19011	hp2	a0001	c0001	t0001	g0001	EAS	JPT	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
NA19012	hp1	a0001	c0001	t0001	g0001	EAS	JPT	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
NA19030	hp1	a0001	c0001	t0001	g0001	AFR	LWK	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
NA19030	hp2	a0001	c0001	t0001	g0001	AFR	LWK	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
NA19043	hp1	a0001	c0001	t0001	g0002	AFR	LWK	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
NA19055	hp1	a0001	c0001	t0001	g0001	EAS	JPT	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
NA19056	hp1	a0001	c0001	t0001	g0001	EAS	JPT	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
NA19058	hp1	a0001	c0001	t0001	g0001	EAS	JPT	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
NA19060	hp1	a0001	c0001	t0001	g0001	EAS	JPT	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
NA19062	hp1	a0001	c0001	t0001	g0001	EAS	JPT	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
NA19063	hp1	a0001	c0001	t0001	g0009	EAS	JPT	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
NA19065	hp1	a0001	c0001	t0001	g0001	EAS	JPT	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
NA19065	hp2	a0001	c0001	t0001	g0001	EAS	JPT	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
NA19066	hp1	a0001	c0001	t0001	g0001	EAS	JPT	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
NA19067	hp1	a0001	c0001	t0001	g0001	EAS	JPT	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
NA19068	hp1	a0001	c0001	t0001	g0001	EAS	JPT	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
NA19070	hp1	a0001	c0001	t0001	g0001	EAS	JPT	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
NA19075	hp1	a0001	c0001	t0001	g0021	EAS	JPT	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
NA19076	hp1	a0001	c0001	t0001	g0001	EAS	JPT	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
NA19079	hp1	a0001	c0001	t0001	g0001	EAS	JPT	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
NA19081	hp1	a0001	c0001	t0001	g0001	EAS	JPT	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
NA19081	hp2	a0001	c0001	t0001	g0001	EAS	JPT	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
NA19082	hp1	a0001	c0001	t0001	g0001	EAS	JPT	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
NA19083	hp1	a0001	c0001	t0001	g0001	EAS	JPT	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
NA19085	hp1	a0001	c0001	t0001	g0001	EAS	JPT	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
NA19086	hp1	a0001	c0001	t0001	g0001	EAS	JPT	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
NA19088	hp1	a0001	c0001	t0001	g0001	EAS	JPT	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
NA19089	hp1	a0001	c0001	t0001	g0001	EAS	JPT	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
NA19090	hp1	a0001	c0001	t0001	g0001	EAS	JPT	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
NA19090	hp2	a0001	c0001	t0001	g0001	EAS	JPT	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
NA19091	hp1	a0001	c0001	t0001	g0001	EAS	JPT	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
NA20129	hp1	a0001	c0001	t0001	g0001	AFR	ASW	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
NA20129	hp2	a0001	c0001	t0004	g0028	AFR	ASW	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
NA20752	hp1	a0001	c0001	t0001	g0020	EUR	TSI	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
NA20805	hp1	a0001	c0001	t0001	g0001	EUR	TSI	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
NA20905	hp1	a0001	c0001	t0001	g0001	SAS	GIH	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
HG01123	hp1	a0001	c0001	t0001	g0001	AMR	CLM	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
HG01123	hp2	a0001	c0001	t0001	g0001	AMR	CLM	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
HG02486	hp1	a0001	c0001	t0001	g0001	AFR	ACB	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
HG02559	hp1	a0001	c0001	t0001	g0002	AFR	ACB	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
HG02559	hp2	a0001	c0001	t0001	g0030	AFR	ACB	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
HG03471	hp1	a0001	c0001	t0001	g0031	AFR	MSL	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
HG06807	hp1	a0001	c0001	t0001	g0001	AFR	USA	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
HG06807	hp2	a0001	c0001	t0001	g0001	AFR	USA	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
NA18955	hp1	a0001	c0001	t0001	g0001	EAS	JPT	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
homoSapiens	chm13v2	a0001	c0001	t0001	g0029	REF	REF	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301
homoSapiens	grch38p0	a0001	c0001	t0001	g0001	REF	REF	XAGE5_chrX_52806287_52823301	XAGE5	chrX	52806287	52823301

view	chr:pos	ref	alt	# # of ahapid:amino-acid(protein) level	ahapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	hgvs_p	genename	geneid	featuretype	featureid	transcript_biotype	rank	cdna cdna pos length	cds cds pos length	aa aa pos length	distance	status	chr	pos

view	chr:pos	ref	alt	# # of chapid	chapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	hgvs_p	genename	geneid	featuretype	featureid	transcript_biotype	rank	cdna cdna pos length	cds cds pos length	aa aa pos length	distance	status	chr	pos
	chrX:52815150	C C	T T	1	a0001c0002 a0001c0002	2	HG02683.hp1 HG03017.hp1 HG02683.hp1 HG03017.hp1	synonymous_variant	LOW	c.237C>T c.237C>T	p.Cys79Cys p.Cys79Cys	XAGE5	ENSG00000171405.14	transcript	ENST00000375501.2	protein_coding	5/6	543/721	237/327	79/108			chrX	52815150

chr:pos	ref	alt	# # of thapid:transcript level	thapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	chr	pos
chrX:52811713	G G	A A	1	a0001c0001t0002 a0001c0001t0002	5	HG01496.hp1 HG01978.hp1 HG01981.hp1 others(2): Show HG01496.hp1 HG01978.hp1 HG01981.hp1 HG02258.hp1 HG02809.hp2	5_prime_UTR_premature_start_codon_gain_variant	LOW	c.-15G>A c.-15G>A	XAGE5	ENSG00000171405.14	transcript	ENST00000375501.2	protein_coding	2/6		chrX	52811713
chrX:52818251	G G	A A	1	a0001c0001t0003 a0001c0001t0003	1	NA18991.hp1 NA18991.hp1	3_prime_UTR_variant	MODIFIER	c.38G>A c.38G>A	XAGE5	ENSG00000171405.14	transcript	ENST00000375501.2	protein_coding	6/6	38	chrX	52818251
chrX:52818264	T T	C C	1	a0001c0001t0004 a0001c0001t0004	1	NA20129.hp2 NA20129.hp2	3_prime_UTR_variant	MODIFIER	c.51T>C c.51T>C	XAGE5	ENSG00000171405.14	transcript	ENST00000375501.2	protein_coding	6/6	51	chrX	52818264

chr:pos	ref	alt	# # of ghapid:genebody level	ghapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	genename	geneid	featuretype	featureid	genebody_biotype	rank	chr	pos
chrX:52811450	G G	A A	1	a0001c0001t0001g0013 a0001c0001t0001g0013	1	HG01168.hp2 HG01168.hp2	intron_variant	MODIFIER	c.-181+38G>A c.-181+38G>A	XAGE5	ENSG00000171405.14	transcript	ENST00000375501.2	protein_coding	1/5	chrX	52811450
chrX:52811855	G G	T T	1	a0001c0001t0001g0031 a0001c0001t0001g0031	1	HG03471.hp1 HG03471.hp1	intron_variant	MODIFIER	c.-9+136G>T c.-9+136G>T	XAGE5	ENSG00000171405.14	transcript	ENST00000375501.2	protein_coding	2/5	chrX	52811855
chrX:52812012	TGCGAAAC others(4): Show TGCGAAACCAAA	T T	1	a0001c0001t0001g0014 a0001c0001t0001g0014	1	HG01255.hp1 HG01255.hp1	intron_variant	MODIFIER	c.-9+294_-9+304delGC others(9): Show c.-9+294_-9+304delGCGAAACCAAA	XAGE5	ENSG00000171405.14	transcript	ENST00000375501.2	protein_coding	2/5	chrX	52812012
chrX:52812111	C C	T T	2	a0001c0001t0001g0031 a0001c0001t0002g0012 a0001c0001t0001g0031 a0001c0001t0002g0012	3	HG02258.hp1 HG02809.hp2 HG03471.hp1 HG02258.hp1 HG02809.hp2 HG03471.hp1	intron_variant	MODIFIER	c.-9+392C>T c.-9+392C>T	XAGE5	ENSG00000171405.14	transcript	ENST00000375501.2	protein_coding	2/5	chrX	52812111
chrX:52812253	A A	G G	1	a0001c0001t0001g0030 a0001c0001t0001g0030	1	HG02559.hp2 HG02559.hp2	intron_variant	MODIFIER	c.-8-306A>G c.-8-306A>G	XAGE5	ENSG00000171405.14	transcript	ENST00000375501.2	protein_coding	2/5	chrX	52812253
chrX:52812344	G G	T T	1	a0001c0001t0001g0011 a0001c0001t0001g0011	2	HG02027.hp1 NA18953.hp1 HG02027.hp1 NA18953.hp1	intron_variant	MODIFIER	c.-8-215G>T c.-8-215G>T	XAGE5	ENSG00000171405.14	transcript	ENST00000375501.2	protein_coding	2/5	chrX	52812344
chrX:52812396	C C	T T	1	a0001c0001t0001g0014 a0001c0001t0001g0014	1	HG01255.hp1 HG01255.hp1	intron_variant	MODIFIER	c.-8-163C>T c.-8-163C>T	XAGE5	ENSG00000171405.14	transcript	ENST00000375501.2	protein_coding	2/5	chrX	52812396
chrX:52812653	A A	T T	1	a0001c0001t0004g0028 a0001c0001t0004g0028	1	NA20129.hp2 NA20129.hp2	intron_variant	MODIFIER	c.72+15A>T c.72+15A>T	XAGE5	ENSG00000171405.14	transcript	ENST00000375501.2	protein_coding	3/5	chrX	52812653
chrX:52812883	A A	G G	1	a0001c0001t0001g0027 a0001c0001t0001g0027	1	NA18975.hp1 NA18975.hp1	intron_variant	MODIFIER	c.72+245A>G c.72+245A>G	XAGE5	ENSG00000171405.14	transcript	ENST00000375501.2	protein_coding	3/5	chrX	52812883
chrX:52813566	G G	T T	2	a0001c0001t0001g0014 a0001c0001t0004g0028 a0001c0001t0001g0014 a0001c0001t0004g0028	2	HG01255.hp1 NA20129.hp2 HG01255.hp1 NA20129.hp2	intron_variant	MODIFIER	c.178+321G>T c.178+321G>T	XAGE5	ENSG00000171405.14	transcript	ENST00000375501.2	protein_coding	4/5	chrX	52813566
chrX:52813935	G G	A A	1	a0001c0001t0001g0015 a0001c0001t0001g0015	1	HG00408.hp1 HG00408.hp1	intron_variant	MODIFIER	c.178+690G>A c.178+690G>A	XAGE5	ENSG00000171405.14	transcript	ENST00000375501.2	protein_coding	4/5	chrX	52813935
chrX:52814084	T T	C C	1	a0001c0001t0001g0016 a0001c0001t0001g0016	1	HG02615.hp1 HG02615.hp1	intron_variant	MODIFIER	c.178+839T>C c.178+839T>C	XAGE5	ENSG00000171405.14	transcript	ENST00000375501.2	protein_coding	4/5	chrX	52814084
chrX:52814101	G G	A A	1	a0001c0001t0004g0028 a0001c0001t0004g0028	1	NA20129.hp2 NA20129.hp2	intron_variant	MODIFIER	c.178+856G>A c.178+856G>A	XAGE5	ENSG00000171405.14	transcript	ENST00000375501.2	protein_coding	4/5	chrX	52814101
chrX:52814288	T T	C C	1	a0001c0001t0001g0007 a0001c0001t0001g0007	2	HG02630.hp1 HG02886.hp2 HG02630.hp1 HG02886.hp2	intron_variant	MODIFIER	c.179-804T>C c.179-804T>C	XAGE5	ENSG00000171405.14	transcript	ENST00000375501.2	protein_coding	4/5	chrX	52814288
chrX:52814625	C C	T T	5	a0001c0001t0001g0002 a0001c0001t0001g0010 a0001c0001t0001g0016 others(2): Show a0001c0001t0001g0002 a0001c0001t0001g0010 a0001c0001t0001g0016 a0001c0001t0001g0026 a0001c0001t0001g0030	27	HG00738.hp1 HG01081.hp2 HG01243.hp1 others(24): Show HG00738.hp1 HG01081.hp2 HG01243.hp1 HG01884.hp1 HG01934.hp1 HG02280.hp1 HG02559.hp1 HG02559.hp2 HG02615.hp1 HG02630.hp2 HG02717.hp1 HG02818.hp1 HG02895.hp1 HG02896.hp2 HG02970.hp2 HG02976.hp1 HG02976.hp2 HG03041.hp2 HG03098.hp1 HG03139.hp1 HG03209.hp1 HG03225.hp1 HG03486.hp1 HG03540.hp1 HG03579.hp1 NA18906.hp2 NA19043.hp1	intron_variant	MODIFIER	c.179-467C>T c.179-467C>T	XAGE5	ENSG00000171405.14	transcript	ENST00000375501.2	protein_coding	4/5	chrX	52814625
chrX:52814675	C C	T T	1	a0001c0001t0001g0025 a0001c0001t0001g0025	1	HG02080.hp1 HG02080.hp1	intron_variant	MODIFIER	c.179-417C>T c.179-417C>T	XAGE5	ENSG00000171405.14	transcript	ENST00000375501.2	protein_coding	4/5	chrX	52814675
chrX:52815035	C C	T T	1	a0001c0001t0001g0024 a0001c0001t0001g0024	1	HG02273.hp1 HG02273.hp1	intron_variant	MODIFIER	c.179-57C>T c.179-57C>T	XAGE5	ENSG00000171405.14	transcript	ENST00000375501.2	protein_coding	4/5	chrX	52815035
chrX:52815078	T T	A A	1	a0001c0001t0001g0010 a0001c0001t0001g0010	2	HG03041.hp2 HG03139.hp1 HG03041.hp2 HG03139.hp1	intron_variant	MODIFIER	c.179-14T>A c.179-14T>A	XAGE5	ENSG00000171405.14	transcript	ENST00000375501.2	protein_coding	4/5	chrX	52815078
chrX:52815296	A A	G G	1	a0001c0001t0001g0014 a0001c0001t0001g0014	1	HG01255.hp1 HG01255.hp1	intron_variant	MODIFIER	c.304+79A>G c.304+79A>G	XAGE5	ENSG00000171405.14	transcript	ENST00000375501.2	protein_coding	5/5	chrX	52815296
chrX:52815450	C C	G G	1	a0001c0001t0001g0014 a0001c0001t0001g0014	1	HG01255.hp1 HG01255.hp1	intron_variant	MODIFIER	c.304+233C>G c.304+233C>G	XAGE5	ENSG00000171405.14	transcript	ENST00000375501.2	protein_coding	5/5	chrX	52815450
chrX:52815742	C C	T T	1	a0001c0001t0001g0023 a0001c0001t0001g0023	1	HG01074.hp1 HG01074.hp1	intron_variant	MODIFIER	c.304+525C>T c.304+525C>T	XAGE5	ENSG00000171405.14	transcript	ENST00000375501.2	protein_coding	5/5	chrX	52815742
chrX:52815887	G G	A A	1	a0001c0001t0001g0017 a0001c0001t0001g0017	1	HG01175.hp2 HG01175.hp2	intron_variant	MODIFIER	c.304+670G>A c.304+670G>A	XAGE5	ENSG00000171405.14	transcript	ENST00000375501.2	protein_coding	5/5	chrX	52815887
chrX:52815971	G G	A A	1	a0001c0001t0002g0012 a0001c0001t0002g0012	2	HG02258.hp1 HG02809.hp2 HG02258.hp1 HG02809.hp2	intron_variant	MODIFIER	c.304+754G>A c.304+754G>A	XAGE5	ENSG00000171405.14	transcript	ENST00000375501.2	protein_coding	5/5	chrX	52815971
chrX:52816456	A A	G G	1	a0001c0001t0001g0009 a0001c0001t0001g0009	2	NA18959.hp1 NA19063.hp1 NA18959.hp1 NA19063.hp1	intron_variant	MODIFIER	c.304+1239A>G c.304+1239A>G	XAGE5	ENSG00000171405.14	transcript	ENST00000375501.2	protein_coding	5/5	chrX	52816456
chrX:52816518	A A	G G	5	a0001c0001t0001g0002 a0001c0001t0001g0010 a0001c0001t0001g0016 others(2): Show a0001c0001t0001g0002 a0001c0001t0001g0010 a0001c0001t0001g0016 a0001c0001t0001g0026 a0001c0001t0001g0030	27	HG00738.hp1 HG01081.hp2 HG01243.hp1 others(24): Show HG00738.hp1 HG01081.hp2 HG01243.hp1 HG01884.hp1 HG01934.hp1 HG02280.hp1 HG02559.hp1 HG02559.hp2 HG02615.hp1 HG02630.hp2 HG02717.hp1 HG02818.hp1 HG02895.hp1 HG02896.hp2 HG02970.hp2 HG02976.hp1 HG02976.hp2 HG03041.hp2 HG03098.hp1 HG03139.hp1 HG03209.hp1 HG03225.hp1 HG03486.hp1 HG03540.hp1 HG03579.hp1 NA18906.hp2 NA19043.hp1	intron_variant	MODIFIER	c.304+1301A>G c.304+1301A>G	XAGE5	ENSG00000171405.14	transcript	ENST00000375501.2	protein_coding	5/5	chrX	52816518
chrX:52817224	A A	G G	2	a0001c0001t0001g0014 a0001c0001t0004g0028 a0001c0001t0001g0014 a0001c0001t0004g0028	2	HG01255.hp1 NA20129.hp2 HG01255.hp1 NA20129.hp2	intron_variant	MODIFIER	c.305-967A>G c.305-967A>G	XAGE5	ENSG00000171405.14	transcript	ENST00000375501.2	protein_coding	5/5	chrX	52817224
chrX:52817243	G G	A A	1	a0001c0001t0001g0026 a0001c0001t0001g0026	1	HG03098.hp1 HG03098.hp1	intron_variant	MODIFIER	c.305-948G>A c.305-948G>A	XAGE5	ENSG00000171405.14	transcript	ENST00000375501.2	protein_coding	5/5	chrX	52817243
chrX:52817478	A A	G G	1	a0001c0001t0001g0022 a0001c0001t0001g0022	1	HG03654.hp1 HG03654.hp1	intron_variant	MODIFIER	c.305-713A>G c.305-713A>G	XAGE5	ENSG00000171405.14	transcript	ENST00000375501.2	protein_coding	5/5	chrX	52817478
chrX:52817480	G G	A A	1	a0001c0001t0001g0004 a0001c0001t0001g0004	4	HG00544.hp2 HG00597.hp2 NA18612.hp1 others(1): Show HG00544.hp2 HG00597.hp2 NA18612.hp1 NA19005.hp1	intron_variant	MODIFIER	c.305-711G>A c.305-711G>A	XAGE5	ENSG00000171405.14	transcript	ENST00000375501.2	protein_coding	5/5	chrX	52817480
chrX:52817484	A A	G G	2	a0001c0001t0001g0003 a0001c0001t0001g0027 a0001c0001t0001g0003 a0001c0001t0001g0027	16	HG00280.hp1 HG00639.hp1 HG00741.hp1 others(13): Show HG00280.hp1 HG00639.hp1 HG00741.hp1 HG01346.hp1 HG01358.hp1 HG01361.hp1 HG01516.hp2 HG02074.hp1 HG03704.hp2 HG04228.hp1 NA18945.hp1 NA18974.hp1 NA18975.hp1 NA18980.hp2 NA18991.hp2 NA19004.hp1	intron_variant	MODIFIER	c.305-707A>G c.305-707A>G	XAGE5	ENSG00000171405.14	transcript	ENST00000375501.2	protein_coding	5/5	chrX	52817484
chrX:52817602	G G	T T	1	a0001c0001t0001g0008 a0001c0001t0001g0008	2	HG02735.hp1 HG04184.hp2 HG02735.hp1 HG04184.hp2	intron_variant	MODIFIER	c.305-589G>T c.305-589G>T	XAGE5	ENSG00000171405.14	transcript	ENST00000375501.2	protein_coding	5/5	chrX	52817602
chrX:52817674	T T	C C	1	a0001c0001t0001g0018 a0001c0001t0001g0018	1	HG01433.hp1 HG01433.hp1	intron_variant	MODIFIER	c.305-517T>C c.305-517T>C	XAGE5	ENSG00000171405.14	transcript	ENST00000375501.2	protein_coding	5/5	chrX	52817674
chrX:52817747	A A	C C	1	a0001c0001t0001g0031 a0001c0001t0001g0031	1	HG03471.hp1 HG03471.hp1	intron_variant	MODIFIER	c.305-444A>C c.305-444A>C	XAGE5	ENSG00000171405.14	transcript	ENST00000375501.2	protein_coding	5/5	chrX	52817747
chrX:52817935	C C	A A	1	a0001c0001t0001g0005 a0001c0001t0001g0005	4	HG02040.hp1 NA18943.hp1 NA18947.hp2 others(1): Show HG02040.hp1 NA18943.hp1 NA18947.hp2 NA18981.hp2	intron_variant	MODIFIER	c.305-256C>A c.305-256C>A	XAGE5	ENSG00000171405.14	transcript	ENST00000375501.2	protein_coding	5/5	chrX	52817935
chrX:52817967	A A	G G	1	a0001c0001t0002g0012 a0001c0001t0002g0012	2	HG02258.hp1 HG02809.hp2 HG02258.hp1 HG02809.hp2	intron_variant	MODIFIER	c.305-224A>G c.305-224A>G	XAGE5	ENSG00000171405.14	transcript	ENST00000375501.2	protein_coding	5/5	chrX	52817967
chrX:52818038	G G	A A	1	a0001c0001t0001g0019 a0001c0001t0001g0019	1	HG00558.hp1 HG00558.hp1	intron_variant	MODIFIER	c.305-153G>A c.305-153G>A	XAGE5	ENSG00000171405.14	transcript	ENST00000375501.2	protein_coding	5/5	chrX	52818038
chrX:52818058	G G	A A	2	a0001c0001t0001g0006 a0001c0001t0002g0006 a0001c0001t0001g0006 a0001c0001t0002g0006	4	HG00639.hp2 HG01496.hp1 HG01978.hp1 others(1): Show HG00639.hp2 HG01496.hp1 HG01978.hp1 HG01981.hp1	intron_variant	MODIFIER	c.305-133G>A c.305-133G>A	XAGE5	ENSG00000171405.14	transcript	ENST00000375501.2	protein_coding	5/5	chrX	52818058
chrX:52818080	G G	T T	1	a0001c0001t0001g0021 a0001c0001t0001g0021	1	NA19075.hp1 NA19075.hp1	intron_variant	MODIFIER	c.305-111G>T c.305-111G>T	XAGE5	ENSG00000171405.14	transcript	ENST00000375501.2	protein_coding	5/5	chrX	52818080
chrX:52818082	T T	G G	1	a0001c0001t0001g0021 a0001c0001t0001g0021	1	NA19075.hp1 NA19075.hp1	intron_variant	MODIFIER	c.305-109T>G c.305-109T>G	XAGE5	ENSG00000171405.14	transcript	ENST00000375501.2	protein_coding	5/5	chrX	52818082
chrX:52818149	G G	A A	1	a0001c0001t0001g0020 a0001c0001t0001g0020	1	NA20752.hp1 NA20752.hp1	intron_variant	MODIFIER	c.305-42G>A c.305-42G>A	XAGE5	ENSG00000171405.14	transcript	ENST00000375501.2	protein_coding	5/5	chrX	52818149

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JoGo Haplotype Explorer

XAGE5_chrX_52806287_52823301 Genic Haplotype Structure on iGV

Translation Multiple Alignment View

Gene Summary (with MANE)

Amino acid(protein) Level Haplotype Info (Total: 1)

Coding Level Haplotype Info (Total: 2)

Transcript Level Haplotype Info (Total: 5)

Genebody Level Haplotype Info (Total: 34)

Haplotype Details by Sample (Haploid Level) (Total: 265)

Amino acid(protein) Level Haplotype Related Variants (Effect to Protein Coding Variants) (Total: 0)

Coding Level Variants (On coding region but no effect to protein coding variants: Synonymous Mutations) (Total: 1)

Transcript Level Haplotype Variants (Exon) (Total: 3)

Genebody Level Haplotype Variants (Intron) (Total: 40)

Annotation (Repeats)

Annotation (SNP Array)