Joint Open Genome and Omics Platform (JoGo)

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Snpeff annotation impact detail

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regionname	pos	ref	alt	annotation	impact	samples	ahapids	chapids	thapids	thapids	ac	an	af	len	hgvs_c	hgvs_p	genename	geneid	featuretype	featureid	transcript_biotype	rank	cdna cdna pos length	cds cds pos length	aa aa pos length	distance	status	chr	external
CHEK2_chr22_28682743_28746820	28718883	AACACACA others(3): Show AACACACACAC	A A	intron_variant intron_variant	MODIFIER	HG00438.hp2 HG00673.hp1 HG02015.hp2 others(4): Show HG00438.hp2 HG00673.hp1 HG02015.hp2 HG02129.hp1 HG02523.hp1 NA18984.hp1 NA19077.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0364 a0001c0002t0001g0365 a0001c0002t0001g0366 others(4): Show a0001c0002t0001g0364 a0001c0002t0001g0365 a0001c0002t0001g0366 a0001c0002t0001g0367 a0001c0002t0001g0368 a0001c0002t0001g0369 a0001c0002t0001g0370	7	384	0.0182	-10	c.683 others(25): Show c.683+502_683+511delGTGTGTGTGT		CHEK2	ENSG00000183765.24	transcript	ENST00000404276.6	protein_coding	5/14						chr22	TogoVar
CHFR_chr12_132827356_132892605	132850964	CATATATA others(3): Show CATATATATAT	C C	intron_variant intron_variant	MODIFIER	HG00741.hp1 HG01109.hp2 HG01167.hp1 others(39): Show HG00741.hp1 HG01109.hp2 HG01167.hp1 HG01169.hp1 HG01433.hp1 HG01891.hp1 HG01978.hp2 HG02055.hp2 HG02129.hp1 HG02145.hp1 HG02280.hp2 HG02486.hp1 HG02559.hp1 HG02615.hp1 HG02615.hp2 HG02630.hp2 HG02647.hp1 HG02698.hp1 HG02717.hp2 HG02723.hp2 HG02922.hp1 HG02965.hp1 HG02965.hp2 HG02970.hp2 HG03209.hp1 HG03209.hp2 HG03225.hp1 HG03453.hp1 HG03471.hp1 HG03516.hp2 HG03540.hp2 NA18522.hp1 NA18906.hp2 NA18943.hp2 NA18962.hp1 NA18968.hp1 NA19000.hp1 NA19043.hp2 NA19055.hp2 NA19063.hp1 NA19084.hp1 NA19091.hp2	a0001 a0002 a0004 others(1): Show a0001 a0002 a0004 a0007	a0001c0001 a0002c0002 a0004c0006 others(1): Show a0001c0001 a0002c0002 a0004c0006 a0007c0012	a0001c0001t0009 a0001c0001t0010 a0001c0001t0014 others(20): Show a0001c0001t0009 a0001c0001t0010 a0001c0001t0014 a0001c0001t0023 a0001c0001t0044 a0001c0001t0073 a0001c0001t0074 a0001c0001t0087 a0001c0001t0092 a0001c0001t0097 a0001c0001t0119 a0002c0002t0002 a0002c0002t0048 a0002c0002t0049 a0002c0002t0125 a0002c0002t0132 a0002c0002t0133 a0002c0002t0137 a0004c0006t0031 a0004c0006t0032 a0004c0006t0134 a0004c0006t0135 a0007c0012t0071	a0001c0001t0009g0005 a0001c0001t0009g0030 a0001c0001t0009g0031 others(33): Show a0001c0001t0009g0005 a0001c0001t0009g0030 a0001c0001t0009g0031 a0001c0001t0009g0033 a0001c0001t0009g0036 a0001c0001t0009g0037 a0001c0001t0010g0236 a0001c0001t0014g0004 a0001c0001t0014g0278 a0001c0001t0014g0279 a0001c0001t0014g0280 a0001c0001t0023g0001 a0001c0001t0044g0018 a0001c0001t0073g0032 a0001c0001t0074g0034 a0001c0001t0087g0281 a0001c0001t0092g0239 a0001c0001t0097g0283 a0001c0001t0119g0035 a0002c0002t0002g0105 a0002c0002t0048g0040 a0002c0002t0048g0044 a0002c0002t0049g0042 a0002c0002t0049g0043 a0002c0002t0125g0066 a0002c0002t0132g0047 a0002c0002t0133g0041 a0002c0002t0137g0067 a0004c0006t0031g0161 a0004c0006t0031g0162 a0004c0006t0031g0163 a0004c0006t0032g0156 a0004c0006t0032g0160 a0004c0006t0134g0157 a0004c0006t0135g0164 a0007c0012t0071g0019	42	378	0.1111	-10	c.149 others(27): Show c.1492+644_1492+653delATATATATAT		CHFR	ENSG00000072609.18	transcript	ENST00000450056.7	protein_coding	12/17						chr12	TogoVar
CHGA_chr14_92918150_92940285	92920654	CAAAAAAA others(3): Show CAAAAAAAAAA	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00639.hp2 HG02818.hp2 HG00639.hp2 HG02818.hp2	a0001 a0009 a0001 a0009	a0001c0001 a0009c0011 a0001c0001 a0009c0011	a0001c0001t0001 a0009c0011t0001 a0001c0001t0001 a0009c0011t0001	a0001c0001t0001g0001 a0009c0011t0001g0063 a0001c0001t0001g0001 a0009c0011t0001g0063	2	447	0.0045	-10	c.-27 others(21): Show c.-2705_-2696delAAAAAAAAAA		CHGA	ENSG00000100604.13	transcript	ENST00000216492.10	protein_coding					2495		chr14	TogoVar
CHGA_chr14_92918150_92940285	92931582	GAGGAGGA others(3): Show GAGGAGGAGGA	G G	frameshift_variant frameshift_variant	HIGH	HG03209.hp1 HG03209.hp1	a0017 a0017	a0017c0032 a0017c0032	a0017c0032t0001 a0017c0032t0001	a0017c0032t0001g0045 a0017c0032t0001g0045	1	447	0.0022	-10	c.689 others(17): Show c.689_698delAGGAGGAGGA	p.Glu others(5): Show p.Glu230fs	CHGA	ENSG00000100604.13	transcript	ENST00000216492.10	protein_coding	6/8	899/1985	689/1374	230/457			chr14	TogoVar
CHGB_chr20_5906510_5930353	5909823	CTTTCTTT others(3): Show CTTTCTTTCTT	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03942.hp1 NA18970.hp1 NA18978.hp1 others(1): Show HG03942.hp1 NA18970.hp1 NA18978.hp1 NA18981.hp2	a0003 a0003	a0003c0003 a0003c0003	a0003c0003t0003 a0003c0003t0003	a0003c0003t0003g0035 a0003c0003t0003g0062 a0003c0003t0003g0069 others(1): Show a0003c0003t0003g0035 a0003c0003t0003g0062 a0003c0003t0003g0069 a0003c0003t0003g0084	4	440	0.0091	-10	c.-18 others(21): Show c.-1810_-1801delTTTCTTTCTT		CHGB	ENSG00000089199.10	transcript	ENST00000378961.9	protein_coding					1686		chr20	TogoVar
CHGB_chr20_5906510_5930353	5910014	TAATACAA others(3): Show TAATACAATAC	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00323.hp2 HG00408.hp2 HG00423.hp1 others(128): Show HG00323.hp2 HG00408.hp2 HG00423.hp1 HG00423.hp2 HG00544.hp1 HG00558.hp1 HG00597.hp2 HG00609.hp1 HG00609.hp2 HG00733.hp1 HG00735.hp1 HG01070.hp1 HG01071.hp2 HG01074.hp1 HG01081.hp1 HG01099.hp1 HG01255.hp2 HG01358.hp1 HG01358.hp2 HG01361.hp2 HG01928.hp2 HG01934.hp2 HG01952.hp2 HG01975.hp1 HG01978.hp1 HG01993.hp2 HG02015.hp1 HG02027.hp1 HG02027.hp2 HG02040.hp1 HG02040.hp2 HG02071.hp1 HG02071.hp2 HG02080.hp2 HG02083.hp1 HG02165.hp2 HG02258.hp2 HG02273.hp2 HG02293.hp1 HG02300.hp1 HG02523.hp2 HG02717.hp2 HG02738.hp1 HG02818.hp2 HG02895.hp1 HG02895.hp2 HG02897.hp1 HG02922.hp1 HG02965.hp1 HG02976.hp2 HG03041.hp1 HG03139.hp1 HG03225.hp2 HG03486.hp2 HG03491.hp1 HG03516.hp2 HG03669.hp2 HG03688.hp2 HG03704.hp1 HG03831.hp2 HG03942.hp2 HG04184.hp2 HG04199.hp2 HG06807.hp1 HG06807.hp2 NA18612.hp1 NA18747.hp1 NA18906.hp2 NA18939.hp2 NA18940.hp2 NA18945.hp1 NA18947.hp1 NA18947.hp2 NA18949.hp1 NA18949.hp2 NA18950.hp2 NA18951.hp2 NA18952.hp1 NA18955.hp2 NA18956.hp1 NA18957.hp1 NA18957.hp2 NA18965.hp2 NA18966.hp2 NA18967.hp2 NA18969.hp1 NA18970.hp2 NA18972.hp1 NA18974.hp2 NA18977.hp1 NA18977.hp2 NA18978.hp2 NA18980.hp1 NA18981.hp1 NA18982.hp1 NA18983.hp1 NA18984.hp2 NA18986.hp1 NA18988.hp1 NA18994.hp1 NA18995.hp2 NA18997.hp1 NA18997.hp2 NA18998.hp2 NA19003.hp2 NA19004.hp2 NA19009.hp1 NA19010.hp1 NA19011.hp1 NA19012.hp2 NA19054.hp2 NA19057.hp1 NA19058.hp2 NA19064.hp2 NA19065.hp1 NA19068.hp1 NA19074.hp1 NA19075.hp2 NA19079.hp1 NA19079.hp2 NA19080.hp1 NA19081.hp1 NA19081.hp2 NA19083.hp2 NA19084.hp1 NA19090.hp1 NA19240.hp2 NA20300.hp2 NA20805.hp1 NA21309.hp1 homoSapiens_chm13v2.hp1	a0001 a0002 a0003 others(11): Show a0001 a0002 a0003 a0004 a0005 a0006 a0007 a0008 a0010 a0013 a0015 a0018 a0021 a0022	a0001c0001 a0001c0016 a0002c0002 others(13): Show a0001c0001 a0001c0016 a0002c0002 a0003c0003 a0004c0004 a0005c0005 a0006c0006 a0007c0007 a0008c0008 a0010c0010 a0010c0019 a0013c0013 a0015c0014 a0018c0018 a0021c0023 a0022c0024	a0001c0001t0001 a0001c0016t0001 a0002c0002t0001 others(15): Show a0001c0001t0001 a0001c0016t0001 a0002c0002t0001 a0002c0002t0002 a0003c0003t0002 a0003c0003t0003 a0004c0004t0001 a0005c0005t0001 a0006c0006t0002 a0007c0007t0004 a0008c0008t0001 a0010c0010t0001 a0010c0019t0001 a0013c0013t0003 a0015c0014t0002 a0018c0018t0004 a0021c0023t0001 a0022c0024t0002	a0001c0001t0001g0001 a0001c0001t0001g0004 a0001c0001t0001g0014 others(60): Show a0001c0001t0001g0001 a0001c0001t0001g0004 a0001c0001t0001g0014 a0001c0001t0001g0028 a0001c0001t0001g0039 a0001c0001t0001g0041 a0001c0001t0001g0086 a0001c0001t0001g0113 a0001c0001t0001g0114 a0001c0001t0001g0118 a0001c0001t0001g0121 a0001c0001t0001g0132 a0001c0001t0001g0138 a0001c0001t0001g0142 a0001c0001t0001g0178 a0001c0016t0001g0004 a0002c0002t0001g0007 a0002c0002t0002g0002 a0002c0002t0002g0007 a0002c0002t0002g0031 a0002c0002t0002g0033 a0002c0002t0002g0047 a0002c0002t0002g0052 a0002c0002t0002g0170 a0002c0002t0002g0180 a0002c0002t0002g0182 a0003c0003t0002g0107 a0003c0003t0002g0125 a0003c0003t0003g0015 a0003c0003t0003g0061 a0003c0003t0003g0073 a0003c0003t0003g0074 a0003c0003t0003g0081 a0003c0003t0003g0083 a0004c0004t0001g0003 a0004c0004t0001g0009 a0004c0004t0001g0010 a0004c0004t0001g0027 a0004c0004t0001g0127 a0005c0005t0001g0005 a0005c0005t0001g0012 a0005c0005t0001g0053 a0005c0005t0001g0054 a0006c0006t0002g0008 a0006c0006t0002g0011 a0006c0006t0002g0090 a0007c0007t0004g0144 a0007c0007t0004g0148 a0007c0007t0004g0157 a0008c0008t0001g0010 a0008c0008t0001g0056 a0008c0008t0001g0185 a0008c0008t0001g0186 a0008c0008t0001g0188 a0008c0008t0001g0190 a0010c0010t0001g0024 a0010c0010t0001g0034 a0010c0019t0001g0024 a0013c0013t0003g0020 a0015c0014t0002g0181 a0018c0018t0004g0149 a0021c0023t0001g0095 a0022c0024t0002g0007	131	440	0.2977	-10	c.-16 others(21): Show c.-1619_-1610delAATACAATAC		CHGB	ENSG00000089199.10	transcript	ENST00000378961.9	protein_coding					1495		chr20	TogoVar
CHGB_chr20_5906510_5930353	5926092	TATATATA others(3): Show TATATATATAC	T T	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01070.hp1 HG02109.hp1 HG02717.hp2 others(4): Show HG01070.hp1 HG02109.hp1 HG02717.hp2 HG03225.hp2 NA18944.hp1 NA18978.hp2 NA19077.hp1	a0001 a0007 a0008 a0001 a0007 a0008	a0001c0001 a0007c0007 a0008c0008 a0001c0001 a0007c0007 a0008c0008	a0001c0001t0001 a0001c0001t0005 a0007c0007t0004 others(1): Show a0001c0001t0001 a0001c0001t0005 a0007c0007t0004 a0008c0008t0001	a0001c0001t0001g0041 a0001c0001t0001g0122 a0001c0001t0005g0082 others(4): Show a0001c0001t0001g0041 a0001c0001t0001g0122 a0001c0001t0005g0082 a0007c0007t0004g0143 a0008c0008t0001g0186 a0008c0008t0001g0188 a0008c0008t0001g0190	7	440	0.0159	-10	c.10 others(21): Show c.1044_*1053delATATATATAC		CHGB	ENSG00000089199.10	transcript	ENST00000378961.9	protein_coding					740		chr20	TogoVar
CHIC1_chrX_73558197_73692111	73662063	TAAATAAA others(3): Show TAAATAAATAA	T T	intron_variant intron_variant	MODIFIER	NA19007.hp1 NA19007.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0126 a0001c0001t0001g0126	1	208	0.0048	-10	c.508 others(29): Show c.508-17252_508-17243delAAATAAATAA		CHIC1	ENSG00000204116.12	transcript	ENST00000373502.10	protein_coding	3/5					INFO_REALIGN_3_PRIME	chrX	TogoVar
CHIC1_chrX_73558197_73692111	73676811	ATTTTTAC others(3): Show ATTTTTACAGT	A A	intron_variant intron_variant	MODIFIER	HG03209.hp1 HG03540.hp2 HG03209.hp1 HG03540.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0067 a0001c0001t0003g0075 a0001c0001t0003g0067 a0001c0001t0003g0075	2	208	0.0096	-10	c.508 others(27): Show c.508-2512_508-2503delTTTACAGTTT		CHIC1	ENSG00000204116.12	transcript	ENST00000373502.10	protein_coding	3/5					INFO_REALIGN_3_PRIME	chrX	TogoVar
CHIC2_chr4_54004789_54069605	54021081	CTTCTCCC others(3): Show CTTCTCCCTTA	C C	intron_variant intron_variant	MODIFIER	HG02109.hp1 HG04204.hp2 HG02109.hp1 HG04204.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0122 a0001c0001t0003g0124 a0001c0001t0003g0122 a0001c0001t0003g0124	2	244	0.0082	-10	c.331 others(27): Show c.331-6972_331-6963delTAAGGGAGAA		CHIC2	ENSG00000109220.11	transcript	ENST00000263921.8	protein_coding	3/5						chr4	TogoVar
CHIC2_chr4_54004789_54069605	54053556	CAAAAAAA others(3): Show CAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG00642.hp1 HG01943.hp2 HG00642.hp1 HG01943.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0133 a0001c0001t0002g0140 a0001c0001t0002g0133 a0001c0001t0002g0140	2	244	0.0082	-10	c.120 others(27): Show c.120-4261_120-4252delTTTTTTTTTT		CHIC2	ENSG00000109220.11	transcript	ENST00000263921.8	protein_coding	1/5						chr4	TogoVar
CHID1_chr11_862859_915810	882003	CAAAAAAA others(3): Show CAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG00140.hp2 HG00140.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0007 a0001c0001t0007	a0001c0001t0007g0215 a0001c0001t0007g0215	1	386	0.0026	-10	c.959 others(27): Show c.959+1135_959+1144delTTTTTTTTTT		CHID1	ENSG00000177830.18	transcript	ENST00000323578.13	protein_coding	10/12						chr11	TogoVar
CHID1_chr11_862859_915810	894121	CAAAAAAA others(3): Show CAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG02074.hp2 HG02129.hp2 HG02145.hp1 others(4): Show HG02074.hp2 HG02129.hp2 HG02145.hp1 HG03041.hp1 HG03195.hp2 HG03486.hp1 NA18971.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0016 a0001c0001t0030 others(1): Show a0001c0001t0001 a0001c0001t0016 a0001c0001t0030 a0001c0001t0031	a0001c0001t0001g0045 a0001c0001t0001g0046 a0001c0001t0001g0051 others(4): Show a0001c0001t0001g0045 a0001c0001t0001g0046 a0001c0001t0001g0051 a0001c0001t0001g0204 a0001c0001t0016g0080 a0001c0001t0030g0330 a0001c0001t0031g0329	7	386	0.0181	-10	c.609 others(25): Show c.609-612_609-603delTTTTTTTTTT		CHID1	ENSG00000177830.18	transcript	ENST00000323578.13	protein_coding	7/12						chr11	TogoVar
CHIT1_chr1_203211079_203234673	203218579	CCGCTCCC others(3): Show CCGCTCCCTCA	C C	intron_variant intron_variant	MODIFIER	HG02965.hp2 HG02965.hp2	a0003 a0003	a0003c0003 a0003c0003	a0003c0003t0001 a0003c0003t0001	a0003c0003t0001g0065 a0003c0003t0001g0065	1	484	0.0021	-10	c.102 others(27): Show c.1029+627_1029+636delTGAGGGAGCG		CHIT1	ENSG00000133063.16	transcript	ENST00000367229.6	protein_coding	9/10						chr1	TogoVar
CHKA_chr11_68047859_68126388	68095725	AAAAAAAA others(3): Show AAAAAAAAAAC	A A	intron_variant intron_variant	MODIFIER	NA18522.hp2 NA18522.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0004	a0001c0001t0004g0119 a0001c0001t0004g0119	1	276	0.0036	-10	c.462 others(27): Show c.462+1284_462+1293delGTTTTTTTTT		CHKA	ENSG00000110721.12	transcript	ENST00000265689.9	protein_coding	2/11						chr11	TogoVar
CHKA_chr11_68047859_68126388	68100937	CTTTTTTT others(3): Show CTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG00323.hp1 HG00323.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0172 a0001c0001t0001g0172	1	276	0.0036	-10	c.351 others(27): Show c.351-3817_351-3808delAAAAAAAAAA		CHKA	ENSG00000110721.12	transcript	ENST00000265689.9	protein_coding	1/11						chr11	TogoVar
CHKA_chr11_68047859_68126388	68125912	GCGCGCGC others(3): Show GCGCGCGCACA	G G	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01346.hp2 HG03710.hp2 HG01346.hp2 HG03710.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0207 a0001c0001t0001g0245 a0001c0001t0001g0207 a0001c0001t0001g0245	2	276	0.0073	-10	c.-47 others(21): Show c.-4745_-4736delTGTGCGCGCG		CHKA	ENSG00000110721.12	transcript	ENST00000265689.9	protein_coding					4525		chr11	TogoVar
CHKA_chr11_68047859_68126388	68125914	GCGCGCAC others(3): Show GCGCGCACACA	G G	upstream_gene_variant upstream_gene_variant	MODIFIER	NA18906.hp2 NA18906.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0007 a0001c0001t0007	a0001c0001t0007g0142 a0001c0001t0007g0142	1	276	0.0036	-10	c.-47 others(21): Show c.-4747_-4738delTGTGTGCGCG		CHKA	ENSG00000110721.12	transcript	ENST00000265689.9	protein_coding					4527		chr11	TogoVar
CHL1_chr3_191763_414417	252361	GATATATA others(3): Show GATATATATAT	G G	intron_variant intron_variant	MODIFIER	HG03225.hp2 HG03225.hp2	a0004 a0004	a0004c0004 a0004c0004	a0004c0004t0008 a0004c0004t0008	a0004c0004t0008g0237 a0004c0004t0008g0237	1	290	0.0035	-10	c.-95 others(27): Show c.-95+7700_-95+7709delATATATATAT		CHL1	ENSG00000134121.10	transcript	ENST00000256509.7	protein_coding	2/27					INFO_REALIGN_3_PRIME	chr3	TogoVar
CHL1_chr3_191763_414417	268551	GTAAAATA others(3): Show GTAAAATAAAA	G G	intron_variant intron_variant	MODIFIER	HG03195.hp1 HG03195.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0023 a0002c0002t0023	a0002c0002t0023g0145 a0002c0002t0023g0145	1	290	0.0035	-10	c.-95 others(29): Show c.-95+23878_-95+23887delAATAAAATAA		CHL1	ENSG00000134121.10	transcript	ENST00000256509.7	protein_coding	2/27					INFO_REALIGN_3_PRIME	chr3	TogoVar
CHL1_chr3_191763_414417	314296	GCACTCTC others(3): Show GCACTCTCTCT	G G	intron_variant intron_variant	MODIFIER	HG01884.hp1 HG02717.hp1 NA19030.hp2 HG01884.hp1 HG02717.hp1 NA19030.hp2	a0009 a0010 a0009 a0010	a0009c0010 a0010c0009 a0009c0010 a0010c0009	a0009c0010t0048 a0010c0009t0034 a0010c0009t0035 a0009c0010t0048 a0010c0009t0034 a0010c0009t0035	a0009c0010t0048g0211 a0010c0009t0034g0007 a0010c0009t0035g0108 a0009c0010t0048g0211 a0010c0009t0034g0007 a0010c0009t0035g0108	3	290	0.0103	-10	c.-94 others(27): Show c.-94-5385_-94-5376delACTCTCTCTC		CHL1	ENSG00000134121.10	transcript	ENST00000256509.7	protein_coding	2/27					INFO_REALIGN_3_PRIME	chr3	TogoVar
CHL1_chr3_191763_414417	322645	AATATATA others(3): Show AATATATATAT	A A	intron_variant intron_variant	MODIFIER	HG02622.hp1 HG03130.hp2 HG03195.hp2 HG02622.hp1 HG03130.hp2 HG03195.hp2	a0004 a0005 a0004 a0005	a0004c0004 a0005c0006 a0004c0004 a0005c0006	a0004c0004t0001 a0005c0006t0001 a0004c0004t0001 a0005c0006t0001	a0004c0004t0001g0044 a0004c0004t0001g0045 a0005c0006t0001g0043 a0004c0004t0001g0044 a0004c0004t0001g0045 a0005c0006t0001g0043	3	290	0.0103	-10	c.91+ others(25): Show c.91+2794_91+2803delTATATATATA		CHL1	ENSG00000134121.10	transcript	ENST00000256509.7	protein_coding	3/27					INFO_REALIGN_3_PRIME	chr3	TogoVar
CHMP2B_chr3_87222309_87260556	87226589	TTGTGTGT others(3): Show TTGTGTGTGTG	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01243.hp1 HG02647.hp1 HG02723.hp1 others(5): Show HG01243.hp1 HG02647.hp1 HG02723.hp1 HG02723.hp2 HG03831.hp2 NA19043.hp2 NA19068.hp2 NA19240.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0016 a0001c0001t0001 a0001c0001t0002 a0001c0001t0016	a0001c0001t0001g0039 a0001c0001t0001g0124 a0001c0001t0001g0125 others(3): Show a0001c0001t0001g0039 a0001c0001t0001g0124 a0001c0001t0001g0125 a0001c0001t0002g0002 a0001c0001t0002g0003 a0001c0001t0016g0090	8	414	0.0193	-10	c.-93 others(19): Show c.-933_-924delTGTGTGTGTG		CHMP2B	ENSG00000083937.10	transcript	ENST00000263780.9	protein_coding					719		chr3	TogoVar
CHMP3_chr2_86498430_86568443	86556627	GCCTTTAA others(3): Show GCCTTTAATCA	G G	intron_variant intron_variant	MODIFIER	HG02486.hp2 HG02886.hp2 HG02896.hp1 others(5): Show HG02486.hp2 HG02886.hp2 HG02896.hp1 HG02922.hp1 HG03130.hp1 HG03516.hp1 HG03579.hp1 NA21309.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0005 a0001c0001t0031 a0001c0001t0002 a0001c0001t0005 a0001c0001t0031	a0001c0001t0002g0017 a0001c0001t0002g0171 a0001c0001t0002g0174 others(4): Show a0001c0001t0002g0017 a0001c0001t0002g0171 a0001c0001t0002g0174 a0001c0001t0005g0169 a0001c0001t0005g0170 a0001c0001t0005g0173 a0001c0001t0031g0172	8	336	0.0238	-10	c.45+ others(25): Show c.45+6667_45+6676delTGATTAAAGG		CHMP3	ENSG00000115561.16	transcript	ENST00000263856.9	protein_coding	1/5						chr2	TogoVar
CHMP4A_chr14_24204615_24218488	24215081	CTTTTTTT others(3): Show CTTTTTTTTTT	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	NA18967.hp2 NA18986.hp1 NA19070.hp2 others(1): Show NA18967.hp2 NA18986.hp1 NA19070.hp2 NA19074.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0003 a0001c0001t0001g0003	4	418	0.0096	-10	c.-16 others(21): Show c.-1652_-1643delAAAAAAAAAA		CHMP4A	ENSG00000254505.11	transcript	ENST00000347519.12	protein_coding					1594		chr14	TogoVar
CHMP4B_chr20_33806348_33859366	33821787	CCAGATTA others(3): Show CCAGATTATTG	C C	intron_variant intron_variant	MODIFIER	HG00408.hp1 HG00597.hp1 HG01069.hp2 others(66): Show HG00408.hp1 HG00597.hp1 HG01069.hp2 HG01106.hp1 HG01175.hp1 HG01192.hp1 HG01256.hp1 HG01258.hp2 HG01261.hp1 HG01361.hp2 HG02040.hp1 HG02071.hp1 HG02074.hp2 HG02080.hp2 HG02083.hp1 HG02109.hp1 HG02132.hp2 HG02155.hp1 HG02273.hp2 HG02300.hp2 HG02683.hp1 HG02698.hp1 HG02735.hp1 HG03688.hp1 HG04115.hp2 HG04184.hp1 HG04228.hp1 NA18612.hp1 NA18939.hp2 NA18945.hp1 NA18947.hp1 NA18951.hp1 NA18955.hp2 NA18956.hp1 NA18962.hp2 NA18964.hp1 NA18967.hp2 NA18968.hp2 NA18969.hp2 NA18973.hp2 NA18974.hp2 NA18977.hp2 NA18979.hp2 NA18981.hp1 NA18982.hp1 NA18986.hp1 NA18989.hp2 NA18991.hp1 NA18992.hp1 NA18994.hp1 NA18994.hp2 NA18995.hp1 NA18998.hp2 NA19002.hp2 NA19004.hp2 NA19007.hp1 NA19010.hp1 NA19012.hp2 NA19062.hp2 NA19066.hp1 NA19068.hp2 NA19070.hp2 NA19075.hp2 NA19077.hp1 NA19081.hp2 NA19082.hp1 NA19086.hp1 NA19090.hp1 NA20300.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0008 a0001c0001t0001g0009 others(40): Show a0001c0001t0001g0001 a0001c0001t0001g0008 a0001c0001t0001g0009 a0001c0001t0001g0015 a0001c0001t0001g0026 a0001c0001t0001g0027 a0001c0001t0001g0043 a0001c0001t0001g0044 a0001c0001t0001g0045 a0001c0001t0001g0046 a0001c0001t0001g0049 a0001c0001t0001g0051 a0001c0001t0001g0052 a0001c0001t0001g0053 a0001c0001t0001g0054 a0001c0001t0001g0056 a0001c0001t0001g0057 a0001c0001t0001g0058 a0001c0001t0001g0059 a0001c0001t0001g0060 a0001c0001t0001g0061 a0001c0001t0001g0062 a0001c0001t0001g0063 a0001c0001t0001g0064 a0001c0001t0001g0065 a0001c0001t0001g0066 a0001c0001t0001g0067 a0001c0001t0001g0068 a0001c0001t0001g0069 a0001c0001t0001g0070 a0001c0001t0001g0071 a0001c0001t0001g0072 a0001c0001t0001g0073 a0001c0001t0001g0074 a0001c0001t0001g0075 a0001c0001t0001g0076 a0001c0001t0001g0077 a0001c0001t0001g0078 a0001c0001t0001g0079 a0001c0001t0001g0080 a0001c0001t0001g0081 a0001c0001t0001g0082 a0001c0001t0001g0083	69	332	0.2078	-10	c.190 others(29): Show c.190+10131_190+10140delAGATTATTGC		CHMP4B	ENSG00000101421.4	transcript	ENST00000217402.3	protein_coding	1/4					INFO_REALIGN_3_PRIME	chr20	TogoVar
CHMP6_chr17_80986841_81005133	80988884	GGTGTGTG others(3): Show GGTGTGTGTGT	G G	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02717.hp2 HG03209.hp1 HG03453.hp1 others(3): Show HG02717.hp2 HG03209.hp1 HG03453.hp1 HG03834.hp2 HG04115.hp1 NA20129.hp2	a0001 a0001	a0001c0001 a0001c0005 a0001c0001 a0001c0005	a0001c0001t0002 a0001c0001t0006 a0001c0005t0003 a0001c0001t0002 a0001c0001t0006 a0001c0005t0003	a0001c0001t0002g0001 a0001c0001t0006g0060 a0001c0005t0003g0018 a0001c0001t0002g0001 a0001c0001t0006g0060 a0001c0005t0003g0018	6	438	0.0137	-10	c.-30 others(21): Show c.-3034_-3025delGTGTGTGTGT		CHMP6	ENSG00000176108.9	transcript	ENST00000325167.9	protein_coding					2956		chr17	TogoVar
CHMP6_chr17_80986841_81005133	81005028	ATTGTGTG others(3): Show ATTGTGTGTGT	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02055.hp1 HG02055.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0005 a0001c0002t0005	a0001c0002t0005g0044 a0001c0002t0005g0044	1	438	0.0023	-10	c.58 others(21): Show c.5876_*5885delTTGTGTGTGT		CHMP6	ENSG00000176108.9	transcript	ENST00000325167.9	protein_coding					4896		chr17	TogoVar
CHMP6_chr17_80986841_81005133	81005029	TTGTGTGT others(3): Show TTGTGTGTGTG	T T	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01243.hp2 HG02074.hp2 HG02717.hp2 others(6): Show HG01243.hp2 HG02074.hp2 HG02717.hp2 HG02970.hp1 HG03453.hp2 HG03654.hp2 NA18989.hp1 NA19072.hp1 NA20129.hp2	a0001 a0001	a0001c0001 a0001c0005 a0001c0008 a0001c0001 a0001c0005 a0001c0008	a0001c0001t0001 a0001c0001t0002 a0001c0001t0006 others(3): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0006 a0001c0001t0015 a0001c0005t0003 a0001c0008t0003	a0001c0001t0001g0003 a0001c0001t0002g0001 a0001c0001t0006g0060 others(4): Show a0001c0001t0001g0003 a0001c0001t0002g0001 a0001c0001t0006g0060 a0001c0001t0015g0001 a0001c0001t0015g0067 a0001c0005t0003g0018 a0001c0008t0003g0018	9	438	0.0206	-10	c.58 others(21): Show c.5877_*5886delTGTGTGTGTG		CHMP6	ENSG00000176108.9	transcript	ENST00000325167.9	protein_coding					4897		chr17	TogoVar
CHMP7_chr8_23238637_23266999	23241367	CTTTTTTT others(3): Show CTTTTTTTTTT	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00099.hp1 HG00408.hp1 HG00597.hp1 others(143): Show HG00099.hp1 HG00408.hp1 HG00597.hp1 HG00609.hp2 HG00621.hp2 HG00639.hp1 HG00642.hp1 HG00673.hp2 HG00733.hp1 HG00735.hp1 HG01069.hp1 HG01069.hp2 HG01070.hp2 HG01071.hp2 HG01074.hp1 HG01081.hp1 HG01081.hp2 HG01106.hp1 HG01123.hp1 HG01168.hp1 HG01169.hp2 HG01192.hp1 HG01346.hp1 HG01346.hp2 HG01358.hp1 HG01361.hp2 HG01433.hp2 HG01496.hp1 HG01884.hp1 HG01943.hp2 HG01952.hp1 HG01978.hp2 HG01993.hp1 HG01993.hp2 HG02015.hp2 HG02040.hp2 HG02056.hp2 HG02074.hp1 HG02080.hp2 HG02083.hp1 HG02083.hp2 HG02129.hp2 HG02132.hp1 HG02135.hp1 HG02148.hp1 HG02148.hp2 HG02155.hp2 HG02165.hp1 HG02165.hp2 HG02257.hp2 HG02258.hp1 HG02273.hp1 HG02280.hp2 HG02630.hp2 HG02683.hp1 HG02698.hp1 HG02698.hp2 HG02735.hp2 HG02738.hp1 HG02738.hp2 HG03139.hp1 HG03195.hp1 HG03225.hp2 HG03239.hp1 HG03654.hp2 HG03831.hp1 HG03942.hp1 HG03942.hp2 HG04184.hp1 HG04199.hp1 HG04204.hp1 HG04204.hp2 HG04228.hp1 HG04228.hp2 NA18941.hp2 NA18942.hp1 NA18942.hp2 NA18944.hp2 NA18945.hp2 NA18946.hp2 NA18948.hp2 NA18950.hp1 NA18951.hp2 NA18952.hp2 NA18953.hp1 NA18953.hp2 NA18954.hp1 NA18956.hp2 NA18959.hp1 NA18959.hp2 NA18962.hp2 NA18965.hp1 NA18965.hp2 NA18966.hp1 NA18969.hp2 NA18971.hp1 NA18972.hp2 NA18977.hp1 NA18978.hp1 NA18979.hp2 NA18981.hp1 NA18982.hp2 NA18987.hp1 NA18989.hp1 NA18990.hp2 NA18992.hp1 NA18993.hp1 NA18998.hp2 NA19002.hp1 NA19003.hp1 NA19003.hp2 NA19004.hp1 NA19004.hp2 NA19006.hp1 NA19006.hp2 NA19009.hp1 NA19009.hp2 NA19010.hp1 NA19057.hp2 NA19060.hp1 NA19062.hp2 NA19063.hp1 NA19064.hp1 NA19065.hp1 NA19067.hp1 NA19068.hp1 NA19068.hp2 NA19072.hp2 NA19075.hp2 NA19077.hp1 NA19077.hp2 NA19079.hp1 NA19079.hp2 NA19080.hp2 NA19083.hp1 NA19084.hp2 NA19085.hp1 NA19086.hp2 NA19087.hp2 NA19088.hp1 NA19090.hp1 NA20129.hp2 NA20300.hp1 NA20752.hp2 NA20805.hp2 homoSapiens_chm13v2.hp1	a0001 a0002 a0005 others(1): Show a0001 a0002 a0005 a0007	a0001c0001 a0002c0002 a0005c0008 others(1): Show a0001c0001 a0002c0002 a0005c0008 a0007c0007	a0001c0001t0002 a0001c0001t0004 a0001c0001t0005 others(13): Show a0001c0001t0002 a0001c0001t0004 a0001c0001t0005 a0001c0001t0007 a0001c0001t0008 a0001c0001t0009 a0001c0001t0010 a0001c0001t0012 a0001c0001t0019 a0001c0001t0020 a0001c0001t0024 a0001c0001t0026 a0001c0001t0027 a0002c0002t0002 a0005c0008t0002 a0007c0007t0002	a0001c0001t0002g0006 a0001c0001t0002g0007 a0001c0001t0002g0008 others(114): Show a0001c0001t0002g0006 a0001c0001t0002g0007 a0001c0001t0002g0008 a0001c0001t0002g0015 a0001c0001t0002g0020 a0001c0001t0002g0046 a0001c0001t0002g0048 a0001c0001t0002g0052 a0001c0001t0002g0055 a0001c0001t0002g0056 a0001c0001t0002g0238 a0001c0001t0002g0239 a0001c0001t0002g0241 a0001c0001t0002g0242 a0001c0001t0002g0243 a0001c0001t0002g0247 a0001c0001t0002g0248 a0001c0001t0002g0249 a0001c0001t0002g0250 a0001c0001t0002g0251 a0001c0001t0002g0252 a0001c0001t0002g0253 a0001c0001t0002g0254 a0001c0001t0002g0258 a0001c0001t0002g0262 a0001c0001t0002g0263 a0001c0001t0002g0271 a0001c0001t0002g0273 a0001c0001t0002g0276 a0001c0001t0002g0279 a0001c0001t0002g0283 a0001c0001t0002g0284 a0001c0001t0002g0285 a0001c0001t0002g0292 a0001c0001t0002g0296 a0001c0001t0002g0297 a0001c0001t0002g0301 a0001c0001t0002g0302 a0001c0001t0002g0303 a0001c0001t0002g0304 a0001c0001t0002g0305 a0001c0001t0002g0306 a0001c0001t0002g0307 a0001c0001t0002g0308 a0001c0001t0002g0309 a0001c0001t0002g0311 a0001c0001t0002g0334 a0001c0001t0004g0182 a0001c0001t0004g0183 a0001c0001t0004g0184 a0001c0001t0005g0014 a0001c0001t0005g0019 a0001c0001t0005g0021 a0001c0001t0005g0049 a0001c0001t0005g0235 a0001c0001t0005g0236 a0001c0001t0005g0237 a0001c0001t0005g0256 a0001c0001t0005g0257 a0001c0001t0005g0260 a0001c0001t0005g0261 a0001c0001t0005g0264 a0001c0001t0005g0265 a0001c0001t0005g0268 a0001c0001t0005g0270 a0001c0001t0005g0280 a0001c0001t0005g0282 a0001c0001t0005g0286 a0001c0001t0005g0291 a0001c0001t0005g0293 a0001c0001t0005g0295 a0001c0001t0005g0310 a0001c0001t0005g0314 a0001c0001t0005g0315 a0001c0001t0005g0320 a0001c0001t0005g0321 a0001c0001t0005g0322 a0001c0001t0005g0324 a0001c0001t0005g0325 a0001c0001t0005g0327 a0001c0001t0007g0181 a0001c0001t0008g0047 a0001c0001t0008g0272 a0001c0001t0008g0278 a0001c0001t0008g0290 a0001c0001t0008g0294 a0001c0001t0008g0313 a0001c0001t0008g0323 a0001c0001t0008g0326 a0001c0001t0008g0332 a0001c0001t0008g0333 a0001c0001t0009g0051 a0001c0001t0009g0255 a0001c0001t0009g0281 a0001c0001t0009g0299 a0001c0001t0009g0300 a0001c0001t0009g0318 a0001c0001t0009g0319 a0001c0001t0010g0331 a0001c0001t0012g0014 a0001c0001t0012g0050 a0001c0001t0012g0240 a0001c0001t0019g0244 a0001c0001t0019g0245 a0001c0001t0019g0246 a0001c0001t0020g0267 a0001c0001t0020g0275 a0001c0001t0020g0288 a0001c0001t0024g0266 a0001c0001t0026g0316 a0001c0001t0027g0277 a0002c0002t0002g0274 a0002c0002t0002g0287 a0002c0002t0002g0289 a0002c0002t0002g0298 a0005c0008t0002g0015 a0007c0007t0002g0312	146	438	0.3333	-10	c.-29 others(21): Show c.-2917_-2908delTTTTTTTTTT		CHMP7	ENSG00000147457.14	transcript	ENST00000397677.6	protein_coding					2269		chr8	TogoVar
CHMP7_chr8_23238637_23266999	23250620	CTGTGTGT others(3): Show CTGTGTGTGTG	C C	intron_variant intron_variant	MODIFIER	HG00738.hp1 HG03669.hp1 NA18522.hp2 others(3): Show HG00738.hp1 HG03669.hp1 NA18522.hp2 NA18945.hp1 NA18959.hp2 NA18970.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0001c0004 a0002c0002 a0001c0001 a0001c0004 a0002c0002	a0001c0001t0001 a0001c0001t0010 a0001c0004t0018 others(1): Show a0001c0001t0001 a0001c0001t0010 a0001c0004t0018 a0002c0002t0002	a0001c0001t0001g0064 a0001c0001t0001g0071 a0001c0001t0001g0234 others(3): Show a0001c0001t0001g0064 a0001c0001t0001g0071 a0001c0001t0001g0234 a0001c0001t0010g0172 a0001c0004t0018g0173 a0002c0002t0002g0298	6	438	0.0137	-10	c.471 others(27): Show c.471+1275_471+1284delGTGTGTGTGT		CHMP7	ENSG00000147457.14	transcript	ENST00000397677.6	protein_coding	3/10					INFO_REALIGN_3_PRIME	chr8	TogoVar
CHM_chrX_85856180_86052558	85913014	GAAAAAAA others(3): Show GAAAAAAAAAA	G G	intron_variant intron_variant	MODIFIER	HG02280.hp2 HG02922.hp1 HG02280.hp2 HG02922.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0009 a0001c0001t0009	a0001c0001t0009g0196 a0001c0001t0009g0199 a0001c0001t0009g0196 a0001c0001t0009g0199	2	245	0.0082	-10	c.116 others(29): Show c.1167-1686_1167-1677delTTTTTTTTTT		CHM	ENSG00000188419.14	transcript	ENST00000357749.7	protein_coding	8/14						chrX	TogoVar
CHM_chrX_85856180_86052558	85949978	AATATATA others(3): Show AATATATATAT	A A	intron_variant intron_variant	MODIFIER	HG01243.hp1 HG01891.hp1 HG02630.hp2 others(2): Show HG01243.hp1 HG01891.hp1 HG02630.hp2 HG02886.hp2 HG03453.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0008 a0001c0001t0008	a0001c0001t0008g0188 a0001c0001t0008g0192 a0001c0001t0008g0193 others(2): Show a0001c0001t0008g0188 a0001c0001t0008g0192 a0001c0001t0008g0193 a0001c0001t0008g0197 a0001c0001t0008g0198	5	245	0.0204	-10	c.116 others(29): Show c.1166+6165_1166+6174delATATATATAT		CHM	ENSG00000188419.14	transcript	ENST00000357749.7	protein_coding	8/14						chrX	TogoVar
CHM_chrX_85856180_86052558	85976875	AACACACA others(3): Show AACACACACAC	A A	intron_variant intron_variant	MODIFIER	HG02109.hp2 HG02109.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0012 a0001c0001t0012	a0001c0001t0012g0224 a0001c0001t0012g0224	1	245	0.0041	-10	c.314 others(27): Show c.314+1882_314+1891delGTGTGTGTGT		CHM	ENSG00000188419.14	transcript	ENST00000357749.7	protein_coding	4/14						chrX	TogoVar
CHM_chrX_85856180_86052558	86021035	TATATATA others(3): Show TATATATACAC	T T	intron_variant intron_variant	MODIFIER	NA19005.hp1 NA19005.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0132 a0001c0001t0001g0132	1	245	0.0041	-10	c.116 others(27): Show c.116+6446_116+6455delGTGTATATAT		CHM	ENSG00000188419.14	transcript	ENST00000357749.7	protein_coding	2/14						chrX	TogoVar
CHM_chrX_85856180_86052558	86021126	GTATATAT others(3): Show GTATATATATA	G G	intron_variant intron_variant	MODIFIER	HG00323.hp1 HG00323.hp2 HG00544.hp2 others(71): Show HG00323.hp1 HG00323.hp2 HG00544.hp2 HG00597.hp1 HG00642.hp1 HG00735.hp2 HG01070.hp2 HG01071.hp2 HG01167.hp1 HG01168.hp2 HG01169.hp1 HG01358.hp1 HG01515.hp1 HG01516.hp2 HG01517.hp1 HG01517.hp2 HG01884.hp2 HG02056.hp1 HG02080.hp2 HG02083.hp1 HG02129.hp1 HG02155.hp2 HG02165.hp2 HG02451.hp2 HG02683.hp1 HG02717.hp1 HG02809.hp1 HG02896.hp1 HG02897.hp2 HG03017.hp1 HG03688.hp1 HG03704.hp1 HG03831.hp1 HG03942.hp1 HG04184.hp2 HG04199.hp1 HG04228.hp1 NA18906.hp2 NA18940.hp1 NA18944.hp1 NA18949.hp2 NA18952.hp1 NA18953.hp1 NA18957.hp1 NA18959.hp1 NA18962.hp1 NA18965.hp1 NA18966.hp1 NA18967.hp1 NA18969.hp1 NA18970.hp1 NA18972.hp2 NA18973.hp1 NA18979.hp2 NA18983.hp1 NA18984.hp1 NA18994.hp1 NA18995.hp1 NA18999.hp2 NA19000.hp1 NA19003.hp2 NA19007.hp1 NA19010.hp1 NA19030.hp2 NA19055.hp1 NA19058.hp1 NA19060.hp1 NA19066.hp1 NA19079.hp1 NA19088.hp1 NA19091.hp1 NA20752.hp1 NA20805.hp1 NA21309.hp2	a0001 a0003 a0005 others(1): Show a0001 a0003 a0005 a0006	a0001c0001 a0001c0002 a0003c0005 others(2): Show a0001c0001 a0001c0002 a0003c0005 a0005c0011 a0006c0010	a0001c0001t0001 a0001c0001t0003 a0001c0001t0009 others(6): Show a0001c0001t0001 a0001c0001t0003 a0001c0001t0009 a0001c0001t0022 a0001c0002t0001 a0001c0002t0002 a0003c0005t0011 a0005c0011t0006 a0006c0010t0017	a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0003 others(71): Show a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0003 a0001c0001t0001g0004 a0001c0001t0001g0005 a0001c0001t0001g0007 a0001c0001t0001g0008 a0001c0001t0001g0009 a0001c0001t0001g0010 a0001c0001t0001g0011 a0001c0001t0001g0012 a0001c0001t0001g0014 a0001c0001t0001g0015 a0001c0001t0001g0016 a0001c0001t0001g0017 a0001c0001t0001g0018 a0001c0001t0001g0019 a0001c0001t0001g0020 a0001c0001t0001g0021 a0001c0001t0001g0022 a0001c0001t0001g0023 a0001c0001t0001g0024 a0001c0001t0001g0026 a0001c0001t0001g0027 a0001c0001t0001g0028 a0001c0001t0001g0029 a0001c0001t0001g0030 a0001c0001t0001g0032 a0001c0001t0001g0035 a0001c0001t0001g0036 a0001c0001t0001g0037 a0001c0001t0001g0038 a0001c0001t0001g0039 a0001c0001t0001g0040 a0001c0001t0001g0044 a0001c0001t0001g0047 a0001c0001t0001g0074 a0001c0001t0001g0174 a0001c0001t0003g0006 a0001c0001t0003g0013 a0001c0001t0009g0210 a0001c0001t0022g0025 a0001c0002t0001g0058 a0001c0002t0001g0067 a0001c0002t0002g0041 a0001c0002t0002g0042 a0001c0002t0002g0043 a0001c0002t0002g0045 a0001c0002t0002g0046 a0001c0002t0002g0048 a0001c0002t0002g0049 a0001c0002t0002g0050 a0001c0002t0002g0051 a0001c0002t0002g0052 a0001c0002t0002g0054 a0001c0002t0002g0055 a0001c0002t0002g0056 a0001c0002t0002g0057 a0001c0002t0002g0059 a0001c0002t0002g0060 a0001c0002t0002g0061 a0001c0002t0002g0062 a0001c0002t0002g0063 a0001c0002t0002g0064 a0001c0002t0002g0065 a0001c0002t0002g0069 a0001c0002t0002g0070 a0001c0002t0002g0071 a0001c0002t0002g0072 a0001c0002t0002g0073 a0003c0005t0011g0228 a0003c0005t0011g0229 a0005c0011t0006g0230 a0006c0010t0017g0033	74	245	0.3020	-10	c.116 others(27): Show c.116+6355_116+6364delTATATATATA		CHM	ENSG00000188419.14	transcript	ENST00000357749.7	protein_coding	2/14						chrX	TogoVar
CHM_chrX_85856180_86052558	86026102	CTTTTTTT others(3): Show CTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG00735.hp1 HG01255.hp1 HG01884.hp1 others(18): Show HG00735.hp1 HG01255.hp1 HG01884.hp1 HG02109.hp2 HG02135.hp1 HG02451.hp1 HG02809.hp2 HG02895.hp1 HG02896.hp1 HG02897.hp1 HG02965.hp1 HG03195.hp2 HG03471.hp1 HG03516.hp2 HG03579.hp1 NA18522.hp1 NA18965.hp1 NA18972.hp1 NA19030.hp2 NA20129.hp1 NA20300.hp2	a0001 a0003 a0004 a0001 a0003 a0004	a0001c0001 a0001c0003 a0001c0008 others(2): Show a0001c0001 a0001c0003 a0001c0008 a0003c0005 a0004c0009	a0001c0001t0001 a0001c0001t0009 a0001c0001t0012 others(4): Show a0001c0001t0001 a0001c0001t0009 a0001c0001t0012 a0001c0003t0005 a0001c0008t0013 a0003c0005t0011 a0004c0009t0012	a0001c0001t0001g0015 a0001c0001t0001g0120 a0001c0001t0001g0122 others(18): Show a0001c0001t0001g0015 a0001c0001t0001g0120 a0001c0001t0001g0122 a0001c0001t0001g0124 a0001c0001t0001g0125 a0001c0001t0001g0127 a0001c0001t0001g0128 a0001c0001t0001g0129 a0001c0001t0001g0130 a0001c0001t0001g0131 a0001c0001t0001g0137 a0001c0001t0001g0138 a0001c0001t0001g0139 a0001c0001t0001g0232 a0001c0001t0009g0210 a0001c0001t0012g0224 a0001c0003t0005g0226 a0001c0003t0005g0227 a0001c0008t0013g0190 a0003c0005t0011g0229 a0004c0009t0012g0225	21	245	0.0857	-10	c.116 others(27): Show c.116+1379_116+1388delAAAAAAAAAA		CHM	ENSG00000188419.14	transcript	ENST00000357749.7	protein_coding	2/14						chrX	TogoVar
CHM_chrX_85856180_86052558	86041726	GTATATAT others(3): Show GTATATATATA	G G	intron_variant intron_variant	MODIFIER	HG01884.hp1 HG02109.hp2 HG02647.hp1 others(2): Show HG01884.hp1 HG02109.hp2 HG02647.hp1 HG03710.hp1 NA20905.hp1	a0001 a0004 a0001 a0004	a0001c0001 a0001c0003 a0004c0009 a0001c0001 a0001c0003 a0004c0009	a0001c0001t0001 a0001c0001t0006 a0001c0001t0012 others(2): Show a0001c0001t0001 a0001c0001t0006 a0001c0001t0012 a0001c0003t0005 a0004c0009t0012	a0001c0001t0001g0117 a0001c0001t0006g0223 a0001c0001t0012g0224 others(2): Show a0001c0001t0001g0117 a0001c0001t0006g0223 a0001c0001t0012g0224 a0001c0003t0005g0118 a0004c0009t0012g0225	5	245	0.0204	-10	c.49+ others(25): Show c.49+5748_49+5757delTATATATATA		CHM	ENSG00000188419.14	transcript	ENST00000357749.7	protein_coding	1/14						chrX	TogoVar
CHN1_chr2_174793809_175010381	174807446	CTGTGTGT others(3): Show CTGTGTGTGTG	C C	intron_variant intron_variant	MODIFIER	HG00639.hp1 HG01081.hp2 HG01517.hp2 others(10): Show HG00639.hp1 HG01081.hp2 HG01517.hp2 HG02040.hp2 HG02300.hp2 HG02683.hp2 HG04115.hp1 NA18612.hp2 NA18999.hp1 NA19006.hp1 NA19063.hp2 NA19088.hp1 NA20300.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0005 others(1): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0005 a0001c0001t0008	a0001c0001t0001g0102 a0001c0001t0001g0119 a0001c0001t0001g0130 others(10): Show a0001c0001t0001g0102 a0001c0001t0001g0119 a0001c0001t0001g0130 a0001c0001t0001g0207 a0001c0001t0001g0208 a0001c0001t0001g0215 a0001c0001t0001g0228 a0001c0001t0001g0231 a0001c0001t0001g0236 a0001c0001t0002g0075 a0001c0001t0002g0082 a0001c0001t0005g0100 a0001c0001t0008g0032	13	276	0.0471	-10	c.110 others(29): Show c.1102+1449_1102+1458delCACACACACA		CHN1	ENSG00000128656.15	transcript	ENST00000409900.9	protein_coding	11/12						chr2	TogoVar
CHN1_chr2_174793809_175010381	174840161	CTTTTTTT others(3): Show CTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG02257.hp1 HG02257.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0015 a0001c0001t0015	a0001c0001t0015g0261 a0001c0001t0015g0261	1	276	0.0036	-10	c.627 others(27): Show c.627+6709_627+6718delAAAAAAAAAA		CHN1	ENSG00000128656.15	transcript	ENST00000409900.9	protein_coding	7/12						chr2	TogoVar
CHN1_chr2_174793809_175010381	174974898	TACACACA others(3): Show TACACACACAC	T T	intron_variant intron_variant	MODIFIER	HG00609.hp1 HG02922.hp1 HG03486.hp2 others(2): Show HG00609.hp1 HG02922.hp1 HG03486.hp2 NA18962.hp1 NA19065.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0113 a0001c0001t0001g0127 a0001c0001t0001g0203 others(2): Show a0001c0001t0001g0113 a0001c0001t0001g0127 a0001c0001t0001g0203 a0001c0001t0001g0250 a0001c0001t0001g0251	5	276	0.0181	-10	c.20- others(27): Show c.20-22706_20-22697delGTGTGTGTGT		CHN1	ENSG00000128656.15	transcript	ENST00000409900.9	protein_coding	1/12						chr2	TogoVar
CHN1_chr2_174793809_175010381	175008838	TTTTGTTA others(3): Show TTTTGTTACCC	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	NA18966.hp1 NA18966.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0009 a0001c0001t0003g0009	1	276	0.0036	-10	c.-39 others(21): Show c.-3936_-3927delGGGTAACAAA		CHN1	ENSG00000128656.15	transcript	ENST00000409900.9	protein_coding					3458		chr2	TogoVar
CHN2_chr7_29189775_29519328	29191610	GAAGCCCA others(3): Show GAAGCCCACAT	G G	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00140.hp1 HG00140.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0005 a0001c0001t0001g0005	1	232	0.0043	-10	c.-33 others(21): Show c.-3331_-3322delAAGCCCACAT		CHN2	ENSG00000106069.26	transcript	ENST00000222792.11	protein_coding					3164		chr7	TogoVar
CHN2_chr7_29189775_29519328	29195623	AGAGAGAG others(3): Show AGAGAGAGTGT	A A	intron_variant intron_variant	MODIFIER	NA18972.hp1 NA18972.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0002 a0001c0002t0002	a0001c0002t0002g0219 a0001c0002t0002g0219	1	232	0.0043	-10	c.49+ others(23): Show c.49+635_49+644delAGAGAGTGTG		CHN2	ENSG00000106069.26	transcript	ENST00000222792.11	protein_coding	1/12					INFO_REALIGN_3_PRIME	chr7	TogoVar
CHN2_chr7_29189775_29519328	29204063	CTCTCTGT others(3): Show CTCTCTGTGTG	C C	intron_variant intron_variant	MODIFIER	HG02145.hp2 HG02145.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0015 a0001c0001t0015	a0001c0001t0015g0117 a0001c0001t0015g0117	1	232	0.0043	-10	c.49+ others(25): Show c.49+9075_49+9084delCTCTGTGTGT		CHN2	ENSG00000106069.26	transcript	ENST00000222792.11	protein_coding	1/12					INFO_REALIGN_3_PRIME	chr7	TogoVar
CHN2_chr7_29189775_29519328	29204065	CTCTGTGT others(3): Show CTCTGTGTGTG	C C	intron_variant intron_variant	MODIFIER	HG01081.hp1 HG01109.hp2 HG02258.hp2 others(4): Show HG01081.hp1 HG01109.hp2 HG02258.hp2 HG02922.hp1 HG02976.hp2 HG03486.hp1 NA18990.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0001t0006 a0001c0001t0007 others(2): Show a0001c0001t0001 a0001c0001t0006 a0001c0001t0007 a0001c0002t0002 a0001c0002t0010	a0001c0001t0001g0166 a0001c0001t0006g0001 a0001c0001t0007g0022 others(4): Show a0001c0001t0001g0166 a0001c0001t0006g0001 a0001c0001t0007g0022 a0001c0002t0002g0002 a0001c0002t0002g0165 a0001c0002t0002g0168 a0001c0002t0010g0167	7	232	0.0302	-10	c.49+ others(25): Show c.49+9077_49+9086delCTGTGTGTGT		CHN2	ENSG00000106069.26	transcript	ENST00000222792.11	protein_coding	1/12					INFO_REALIGN_3_PRIME	chr7	TogoVar
CHN2_chr7_29189775_29519328	29204067	CTGTGTGT others(3): Show CTGTGTGTGTG	C C	intron_variant intron_variant	MODIFIER	HG01081.hp2 HG02129.hp1 HG02451.hp2 others(4): Show HG01081.hp2 HG02129.hp1 HG02451.hp2 HG02572.hp1 HG02896.hp1 HG02897.hp1 HG04228.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0001c0002 a0001c0006 others(1): Show a0001c0001 a0001c0002 a0001c0006 a0002c0003	a0001c0001t0001 a0001c0001t0006 a0001c0001t0008 others(3): Show a0001c0001t0001 a0001c0001t0006 a0001c0001t0008 a0001c0002t0002 a0001c0006t0022 a0002c0003t0004	a0001c0001t0001g0120 a0001c0001t0006g0066 a0001c0001t0008g0065 others(4): Show a0001c0001t0001g0120 a0001c0001t0006g0066 a0001c0001t0008g0065 a0001c0002t0002g0148 a0001c0002t0002g0149 a0001c0006t0022g0119 a0002c0003t0004g0124	7	232	0.0302	-10	c.49+ others(25): Show c.49+9117_49+9126delGTGTGTGTGT		CHN2	ENSG00000106069.26	transcript	ENST00000222792.11	protein_coding	1/12					INFO_REALIGN_3_PRIME	chr7	TogoVar
CHN2_chr7_29189775_29519328	29242759	GAAAAAAA others(3): Show GAAAAAAAAAA	G G	intron_variant intron_variant	MODIFIER	HG00140.hp2 HG00438.hp2 HG00558.hp2 others(55): Show HG00140.hp2 HG00438.hp2 HG00558.hp2 HG00597.hp1 HG00597.hp2 HG00609.hp1 HG00609.hp2 HG00639.hp1 HG00673.hp1 HG00673.hp2 HG01081.hp2 HG01109.hp1 HG01168.hp2 HG01257.hp2 HG01496.hp1 HG01496.hp2 HG01891.hp2 HG01928.hp2 HG01934.hp1 HG01952.hp1 HG01978.hp2 HG02040.hp1 HG02055.hp2 HG02080.hp2 HG02135.hp1 HG02148.hp2 HG02165.hp2 HG02273.hp1 HG02280.hp1 HG02735.hp2 HG02818.hp2 HG02886.hp2 HG03239.hp2 HG03486.hp2 HG03491.hp1 HG03710.hp1 HG03834.hp2 HG04228.hp1 NA18612.hp1 NA18942.hp2 NA18948.hp2 NA18957.hp1 NA18970.hp1 NA18970.hp2 NA18972.hp1 NA18984.hp1 NA18986.hp2 NA18998.hp1 NA19000.hp1 NA19005.hp1 NA19012.hp2 NA19079.hp1 NA19080.hp1 NA19084.hp2 NA19085.hp1 NA19085.hp2 NA21309.hp2 homoSapiens_chm13v2.hp1	a0001 a0002 a0003 a0001 a0002 a0003	a0001c0001 a0001c0002 a0001c0005 others(3): Show a0001c0001 a0001c0002 a0001c0005 a0002c0003 a0002c0004 a0003c0007	a0001c0001t0001 a0001c0001t0003 a0001c0001t0005 others(17): Show a0001c0001t0001 a0001c0001t0003 a0001c0001t0005 a0001c0001t0006 a0001c0001t0007 a0001c0001t0008 a0001c0001t0009 a0001c0001t0011 a0001c0001t0023 a0001c0002t0001 a0001c0002t0002 a0001c0002t0004 a0001c0005t0005 a0001c0005t0007 a0002c0003t0002 a0002c0003t0004 a0002c0004t0005 a0002c0004t0007 a0002c0004t0017 a0003c0007t0013	a0001c0001t0001g0029 a0001c0001t0001g0064 a0001c0001t0001g0082 others(55): Show a0001c0001t0001g0029 a0001c0001t0001g0064 a0001c0001t0001g0082 a0001c0001t0001g0160 a0001c0001t0001g0192 a0001c0001t0001g0224 a0001c0001t0003g0044 a0001c0001t0003g0049 a0001c0001t0003g0057 a0001c0001t0003g0079 a0001c0001t0003g0111 a0001c0001t0003g0138 a0001c0001t0003g0200 a0001c0001t0003g0204 a0001c0001t0005g0018 a0001c0001t0005g0129 a0001c0001t0005g0159 a0001c0001t0005g0174 a0001c0001t0005g0193 a0001c0001t0006g0037 a0001c0001t0006g0066 a0001c0001t0007g0122 a0001c0001t0007g0123 a0001c0001t0007g0205 a0001c0001t0007g0212 a0001c0001t0007g0223 a0001c0001t0008g0065 a0001c0001t0008g0176 a0001c0001t0008g0178 a0001c0001t0008g0228 a0001c0001t0009g0017 a0001c0001t0009g0158 a0001c0001t0009g0232 a0001c0001t0011g0046 a0001c0001t0023g0206 a0001c0002t0001g0063 a0001c0002t0002g0077 a0001c0002t0002g0081 a0001c0002t0002g0083 a0001c0002t0002g0215 a0001c0002t0002g0219 a0001c0002t0004g0004 a0001c0002t0004g0074 a0001c0002t0004g0169 a0001c0002t0004g0196 a0001c0002t0004g0207 a0001c0005t0005g0151 a0001c0005t0007g0092 a0002c0003t0002g0142 a0002c0003t0004g0099 a0002c0003t0004g0101 a0002c0003t0004g0110 a0002c0003t0004g0203 a0002c0004t0005g0175 a0002c0004t0005g0202 a0002c0004t0007g0084 a0002c0004t0017g0128 a0003c0007t0013g0013	58	232	0.2500	-10	c.49+ others(27): Show c.49+47786_49+47795delAAAAAAAAAA		CHN2	ENSG00000106069.26	transcript	ENST00000222792.11	protein_coding	1/12					INFO_REALIGN_3_PRIME	chr7	TogoVar
CHN2_chr7_29189775_29519328	29252578	GTTTTTTT others(3): Show GTTTTTTTTTT	G G	intron_variant intron_variant	MODIFIER	HG04204.hp1 NA18971.hp1 HG04204.hp1 NA18971.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0005 a0001c0001t0009 a0001c0001t0005 a0001c0001t0009	a0001c0001t0005g0179 a0001c0001t0009g0054 a0001c0001t0005g0179 a0001c0001t0009g0054	2	232	0.0086	-10	c.49+ others(27): Show c.49+57607_49+57616delTTTTTTTTTT		CHN2	ENSG00000106069.26	transcript	ENST00000222792.11	protein_coding	1/12					INFO_REALIGN_3_PRIME	chr7	TogoVar
CHN2_chr7_29189775_29519328	29273333	ATATATAT others(3): Show ATATATATGTG	A A	intron_variant intron_variant	MODIFIER	HG01109.hp1 HG01109.hp1	a0002 a0002	a0002c0003 a0002c0003	a0002c0003t0002 a0002c0003t0002	a0002c0003t0002g0142 a0002c0003t0002g0142	1	232	0.0043	-10	c.49+ others(27): Show c.49+78351_49+78360delGTGTATATAT		CHN2	ENSG00000106069.26	transcript	ENST00000222792.11	protein_coding	1/12					INFO_REALIGN_3_PRIME	chr7	TogoVar

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