Joint Open Genome and Omics Platform (JoGo)

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Snpeff annotation impact detail

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regionname	pos	ref	alt	annotation	impact	samples	ahapids	chapids	thapids	thapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
CLEC1A_chr12_10064554_10103985	10085196	AACACACA others(3): Show AACACACACAC	A A	intron_variant intron_variant	MODIFIER	HG01109.hp2 HG01257.hp1 HG01891.hp2 others(31): Show HG01109.hp2 HG01257.hp1 HG01891.hp2 HG02027.hp1 HG02055.hp1 HG02257.hp1 HG02280.hp2 HG02615.hp2 HG02630.hp2 HG02647.hp2 HG02723.hp1 HG02818.hp1 HG02895.hp1 HG02896.hp2 HG02897.hp1 HG02922.hp2 HG02976.hp2 HG03098.hp1 HG03130.hp1 HG03139.hp2 HG03453.hp1 HG03453.hp2 HG03486.hp1 HG03486.hp2 HG03516.hp2 HG03540.hp2 HG03579.hp1 HG03579.hp2 NA18522.hp2 NA18906.hp2 NA19240.hp2 NA20129.hp1 NA20129.hp2 NA20300.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0003 a0001c0001t0004 others(2): Show a0001c0001t0001 a0001c0001t0003 a0001c0001t0004 a0001c0001t0006 a0001c0001t0010	a0001c0001t0001g0003 a0001c0001t0001g0006 a0001c0001t0001g0007 others(21): Show a0001c0001t0001g0003 a0001c0001t0001g0006 a0001c0001t0001g0007 a0001c0001t0001g0012 a0001c0001t0001g0025 a0001c0001t0001g0026 a0001c0001t0001g0048 a0001c0001t0001g0049 a0001c0001t0001g0059 a0001c0001t0001g0107 a0001c0001t0001g0130 a0001c0001t0001g0132 a0001c0001t0001g0133 a0001c0001t0001g0134 a0001c0001t0001g0135 a0001c0001t0001g0137 a0001c0001t0001g0138 a0001c0001t0003g0139 a0001c0001t0003g0141 a0001c0001t0004g0040 a0001c0001t0004g0136 a0001c0001t0006g0038 a0001c0001t0006g0039 a0001c0001t0010g0037	34	384	0.0885	-10	c.215 others(27): Show c.215-3793_215-3784delGTGTGTGTGT	CLEC1A	ENSG00000150048.10	transcript	ENST00000315330.8	protein_coding	2/5			chr12	TogoVar
CLEC1A_chr12_10064554_10103985	10087472	TTATATAT others(3): Show TTATATATATA	T T	intron_variant intron_variant	MODIFIER	HG00099.hp2 HG00735.hp2 HG01081.hp1 others(6): Show HG00099.hp2 HG00735.hp2 HG01081.hp1 HG01993.hp1 HG02071.hp1 HG02559.hp2 HG02698.hp2 NA18957.hp2 NA18959.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0003 a0001c0001t0001 a0001c0001t0003	a0001c0001t0001g0029 a0001c0001t0001g0184 a0001c0001t0001g0185 others(5): Show a0001c0001t0001g0029 a0001c0001t0001g0184 a0001c0001t0001g0185 a0001c0001t0001g0186 a0001c0001t0001g0187 a0001c0001t0001g0205 a0001c0001t0001g0213 a0001c0001t0003g0070	9	384	0.0234	-10	c.214 others(27): Show c.214+1642_214+1651delTATATATATA	CLEC1A	ENSG00000150048.10	transcript	ENST00000315330.8	protein_coding	2/5			chr12	TogoVar
CLEC1A_chr12_10064554_10103985	10100759	GAAAAAAA others(3): Show GAAAAAAAAAA	G G	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03130.hp2 HG03130.hp2	a0005 a0005	a0005c0006 a0005c0006	a0005c0006t0001 a0005c0006t0001	a0005c0006t0001g0047 a0005c0006t0001g0047	1	384	0.0026	-10	c.-18 others(21): Show c.-1847_-1838delTTTTTTTTTT	CLEC1A	ENSG00000150048.10	transcript	ENST00000315330.8	protein_coding		1775		chr12	TogoVar
CLEC1B_chr12_9988075_10004121	9998644	TTTTTGTT others(3): Show TTTTTGTTTTG	T T	intron_variant intron_variant	MODIFIER	HG00099.hp1 HG00280.hp2 HG00408.hp2 others(166): Show HG00099.hp1 HG00280.hp2 HG00408.hp2 HG00438.hp2 HG00621.hp2 HG00639.hp1 HG00733.hp1 HG00733.hp2 HG00735.hp2 HG00738.hp1 HG01071.hp1 HG01074.hp2 HG01081.hp1 HG01081.hp2 HG01167.hp2 HG01168.hp1 HG01168.hp2 HG01175.hp1 HG01192.hp1 HG01192.hp2 HG01243.hp1 HG01255.hp1 HG01255.hp2 HG01256.hp2 HG01258.hp2 HG01261.hp1 HG01358.hp2 HG01361.hp2 HG01433.hp1 HG01496.hp1 HG01515.hp1 HG01515.hp2 HG01516.hp1 HG01517.hp2 HG01884.hp1 HG01884.hp2 HG01891.hp2 HG01934.hp1 HG01943.hp2 HG01952.hp2 HG01993.hp1 HG02015.hp1 HG02027.hp1 HG02027.hp2 HG02055.hp1 HG02074.hp1 HG02129.hp1 HG02132.hp1 HG02145.hp1 HG02145.hp2 HG02155.hp1 HG02273.hp2 HG02280.hp1 HG02293.hp2 HG02300.hp1 HG02486.hp2 HG02523.hp2 HG02559.hp2 HG02572.hp2 HG02602.hp1 HG02602.hp2 HG02615.hp2 HG02622.hp1 HG02630.hp1 HG02647.hp1 HG02683.hp1 HG02698.hp1 HG02698.hp2 HG02717.hp1 HG02723.hp1 HG02809.hp2 HG02818.hp1 HG02886.hp1 HG02895.hp1 HG02922.hp2 HG02965.hp1 HG02976.hp2 HG03041.hp1 HG03098.hp2 HG03130.hp1 HG03139.hp1 HG03195.hp1 HG03209.hp1 HG03209.hp2 HG03225.hp1 HG03453.hp1 HG03486.hp2 HG03490.hp1 HG03492.hp1 HG03579.hp1 HG03579.hp2 HG03654.hp2 HG03704.hp2 HG03831.hp2 HG04199.hp1 HG06807.hp1 HG06807.hp2 NA18522.hp2 NA18612.hp2 NA18906.hp2 NA18940.hp1 NA18941.hp2 NA18943.hp2 NA18944.hp2 NA18945.hp1 NA18947.hp1 NA18950.hp1 NA18951.hp1 NA18954.hp1 NA18959.hp1 NA18961.hp1 NA18962.hp1 NA18962.hp2 NA18964.hp2 NA18967.hp1 NA18971.hp2 NA18972.hp1 NA18973.hp2 NA18974.hp1 NA18975.hp2 NA18979.hp1 NA18980.hp1 NA18981.hp1 NA18982.hp1 NA18985.hp2 NA18986.hp1 NA18989.hp2 NA18991.hp1 NA18992.hp1 NA18994.hp2 NA18997.hp1 NA18998.hp1 NA19003.hp1 NA19004.hp2 NA19005.hp2 NA19007.hp2 NA19009.hp1 NA19009.hp2 NA19010.hp2 NA19011.hp2 NA19030.hp2 NA19043.hp1 NA19058.hp2 NA19060.hp2 NA19064.hp1 NA19064.hp2 NA19065.hp2 NA19066.hp1 NA19066.hp2 NA19074.hp2 NA19075.hp2 NA19076.hp2 NA19077.hp1 NA19079.hp2 NA19084.hp1 NA19088.hp1 NA19089.hp1 NA19090.hp1 NA19091.hp1 NA19240.hp2 NA20129.hp1 NA20129.hp2 NA20300.hp1 NA20752.hp1 NA20805.hp1 NA20905.hp1 NA20905.hp2 NA21309.hp1 homoSapiens_chm13v2.hp1	a0002 a0003 a0006 a0002 a0003 a0006	a0002c0002 a0003c0003 a0006c0006 a0002c0002 a0003c0003 a0006c0006	a0002c0002t0001 a0003c0003t0001 a0006c0006t0001 a0002c0002t0001 a0003c0003t0001 a0006c0006t0001	a0002c0002t0001g0004 a0002c0002t0001g0007 a0002c0002t0001g0011 others(30): Show a0002c0002t0001g0004 a0002c0002t0001g0007 a0002c0002t0001g0011 a0002c0002t0001g0012 a0002c0002t0001g0014 a0002c0002t0001g0021 a0002c0002t0001g0022 a0002c0002t0001g0029 a0002c0002t0001g0030 a0002c0002t0001g0031 a0002c0002t0001g0032 a0002c0002t0001g0054 a0002c0002t0001g0055 a0002c0002t0001g0056 a0002c0002t0001g0057 a0002c0002t0001g0058 a0002c0002t0001g0059 a0002c0002t0001g0060 a0002c0002t0001g0062 a0002c0002t0001g0063 a0002c0002t0001g0064 a0002c0002t0001g0065 a0002c0002t0001g0066 a0002c0002t0001g0067 a0002c0002t0001g0071 a0002c0002t0001g0072 a0003c0003t0001g0002 a0003c0003t0001g0015 a0003c0003t0001g0033 a0003c0003t0001g0068 a0003c0003t0001g0069 a0003c0003t0001g0070 a0006c0006t0001g0061	169	462	0.3658	-10	c.65- others(23): Show c.65-274_65-265delCAAAACAAAA	CLEC1B	ENSG00000165682.15	transcript	ENST00000298527.11	protein_coding	1/5			chr12	TogoVar
CLEC2A_chr12_9908227_9937370	9924438	AAACCCAA others(3): Show AAACCCAACCC	A A	intron_variant intron_variant	MODIFIER	HG01884.hp1 HG01993.hp2 HG02818.hp1 others(2): Show HG01884.hp1 HG01993.hp2 HG02818.hp1 HG02970.hp1 HG03195.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0001	a0002c0002t0001g0016 a0002c0002t0001g0016	5	436	0.0115	-10	c.139 others(27): Show c.139+1812_139+1821delGGGTTGGGTT	CLEC2A	ENSG00000188393.9	transcript	ENST00000455827.2	protein_coding	2/4			chr12	TogoVar
CLEC2A_chr12_9908227_9937370	9925878	CCCCTCCC others(3): Show CCCCTCCCTAA	C C	intron_variant intron_variant	MODIFIER	HG02572.hp1 HG02622.hp1 HG02630.hp1 HG02572.hp1 HG02622.hp1 HG02630.hp1	a0002 a0008 a0002 a0008	a0002c0002 a0008c0012 a0002c0002 a0008c0012	a0002c0002t0004 a0008c0012t0001 a0002c0002t0004 a0008c0012t0001	a0002c0002t0004g0049 a0002c0002t0004g0050 a0008c0012t0001g0051 a0002c0002t0004g0049 a0002c0002t0004g0050 a0008c0012t0001g0051	3	436	0.0069	-10	c.139 others(25): Show c.139+372_139+381delTTAGGGAGGG	CLEC2A	ENSG00000188393.9	transcript	ENST00000455827.2	protein_coding	2/4			chr12	TogoVar
CLEC2D_chr12_9664713_9704553	9683325	TTTTGTGT others(3): Show TTTTGTGTTTG	T T	intron_variant intron_variant	MODIFIER	HG00733.hp2 HG00738.hp2 HG01074.hp2 others(32): Show HG00733.hp2 HG00738.hp2 HG01074.hp2 HG01167.hp1 HG01255.hp1 HG01257.hp2 HG01884.hp2 HG01934.hp1 HG02109.hp2 HG02280.hp2 HG02486.hp1 HG02559.hp1 HG02615.hp2 HG02622.hp1 HG02622.hp2 HG02630.hp1 HG02647.hp1 HG02647.hp2 HG02717.hp2 HG02723.hp2 HG02809.hp1 HG02922.hp2 HG03098.hp2 HG03195.hp1 HG03209.hp2 HG03225.hp1 HG03239.hp1 HG03471.hp1 HG03486.hp1 HG03540.hp2 HG06807.hp2 NA18522.hp2 NA20129.hp1 NA20752.hp2 NA21309.hp2	a0001 a0003 a0001 a0003	a0001c0006 a0003c0003 a0003c0004 a0001c0006 a0003c0003 a0003c0004	a0001c0006t0003 a0001c0006t0009 a0003c0003t0003 others(6): Show a0001c0006t0003 a0001c0006t0009 a0003c0003t0003 a0003c0003t0009 a0003c0003t0018 a0003c0003t0061 a0003c0003t0063 a0003c0004t0006 a0003c0004t0024	a0001c0006t0003g0044 a0001c0006t0003g0184 a0001c0006t0009g0040 others(27): Show a0001c0006t0003g0044 a0001c0006t0003g0184 a0001c0006t0009g0040 a0003c0003t0003g0019 a0003c0003t0003g0033 a0003c0003t0003g0034 a0003c0003t0003g0035 a0003c0003t0003g0130 a0003c0003t0003g0134 a0003c0003t0003g0135 a0003c0003t0003g0136 a0003c0003t0003g0137 a0003c0003t0003g0138 a0003c0003t0003g0139 a0003c0003t0003g0140 a0003c0003t0003g0145 a0003c0003t0003g0147 a0003c0003t0003g0161 a0003c0003t0003g0163 a0003c0003t0003g0164 a0003c0003t0009g0040 a0003c0003t0009g0157 a0003c0003t0009g0158 a0003c0003t0009g0159 a0003c0003t0009g0160 a0003c0003t0018g0146 a0003c0003t0061g0034 a0003c0003t0063g0133 a0003c0004t0006g0108 a0003c0004t0024g0150	35	388	0.0902	-10	c.172 others(27): Show c.172+2296_172+2305delGTGTTTGTTT	CLEC2D	ENSG00000069493.15	transcript	ENST00000290855.11	protein_coding	2/4		INFO_REALIGN_3_PRIME	chr12	TogoVar
CLEC4A_chr12_8118617_8143607	8125205	AATAATAG others(3): Show AATAATAGGTC	A A	intron_variant intron_variant	MODIFIER	HG00099.hp2 HG00140.hp1 HG00280.hp2 others(223): Show HG00099.hp2 HG00140.hp1 HG00280.hp2 HG00408.hp2 HG00438.hp2 HG00544.hp2 HG00558.hp1 HG00558.hp2 HG00597.hp2 HG00609.hp1 HG00621.hp2 HG00639.hp1 HG00639.hp2 HG00642.hp2 HG00673.hp2 HG00733.hp1 HG00733.hp2 HG00735.hp2 HG00738.hp1 HG00738.hp2 HG00741.hp2 HG01069.hp1 HG01069.hp2 HG01070.hp1 HG01070.hp2 HG01071.hp1 HG01071.hp2 HG01074.hp2 HG01081.hp1 HG01081.hp2 HG01099.hp2 HG01106.hp1 HG01109.hp1 HG01123.hp1 HG01123.hp2 HG01168.hp2 HG01169.hp1 HG01175.hp1 HG01192.hp2 HG01243.hp2 HG01255.hp1 HG01255.hp2 HG01256.hp1 HG01257.hp2 HG01261.hp1 HG01346.hp2 HG01361.hp1 HG01361.hp2 HG01433.hp2 HG01496.hp1 HG01515.hp1 HG01515.hp2 HG01516.hp2 HG01884.hp1 HG01884.hp2 HG01928.hp1 HG01934.hp1 HG01934.hp2 HG01978.hp1 HG01981.hp1 HG02015.hp1 HG02027.hp1 HG02040.hp2 HG02056.hp1 HG02056.hp2 HG02071.hp2 HG02080.hp1 HG02132.hp1 HG02132.hp2 HG02148.hp2 HG02155.hp1 HG02155.hp2 HG02257.hp1 HG02273.hp1 HG02273.hp2 HG02293.hp2 HG02451.hp2 HG02486.hp1 HG02523.hp1 HG02559.hp1 HG02647.hp2 HG02698.hp1 HG02717.hp1 HG02735.hp2 HG02738.hp2 HG02818.hp1 HG02818.hp2 HG02896.hp2 HG02897.hp1 HG02922.hp2 HG02970.hp1 HG03017.hp1 HG03041.hp1 HG03139.hp2 HG03209.hp1 HG03209.hp2 HG03225.hp1 HG03225.hp2 HG03239.hp1 HG03471.hp2 HG03490.hp2 HG03491.hp1 HG03540.hp2 HG03669.hp1 HG03704.hp2 HG03710.hp2 HG03831.hp2 HG03834.hp1 HG03834.hp2 HG03942.hp2 HG04115.hp1 HG04115.hp2 HG04184.hp2 HG04199.hp1 HG04204.hp1 HG04204.hp2 HG04228.hp1 HG06807.hp1 NA18522.hp1 NA18612.hp1 NA18906.hp2 NA18939.hp2 NA18940.hp1 NA18940.hp2 NA18941.hp2 NA18942.hp1 NA18944.hp2 NA18949.hp1 NA18949.hp2 NA18952.hp1 NA18952.hp2 NA18953.hp2 NA18954.hp1 NA18954.hp2 NA18956.hp1 NA18957.hp2 NA18959.hp1 NA18960.hp1 NA18961.hp1 NA18962.hp1 NA18963.hp1 NA18964.hp1 NA18965.hp1 NA18965.hp2 NA18966.hp1 NA18967.hp2 NA18968.hp1 NA18968.hp2 NA18969.hp1 NA18969.hp2 NA18970.hp1 NA18971.hp1 NA18971.hp2 NA18973.hp1 NA18974.hp1 NA18974.hp2 NA18975.hp1 NA18977.hp2 NA18979.hp2 NA18981.hp2 NA18982.hp2 NA18983.hp2 NA18984.hp1 NA18985.hp2 NA18986.hp1 NA18986.hp2 NA18987.hp2 NA18990.hp1 NA18990.hp2 NA18991.hp1 NA18991.hp2 NA18992.hp2 NA18995.hp1 NA18995.hp2 NA18997.hp1 NA18997.hp2 NA18998.hp2 NA18999.hp1 NA19002.hp2 NA19003.hp2 NA19004.hp1 NA19005.hp1 NA19006.hp1 NA19011.hp1 NA19012.hp1 NA19030.hp1 NA19030.hp2 NA19043.hp2 NA19057.hp2 NA19058.hp2 NA19059.hp2 NA19060.hp2 NA19062.hp1 NA19062.hp2 NA19064.hp2 NA19066.hp2 NA19068.hp1 NA19068.hp2 NA19070.hp1 NA19074.hp2 NA19076.hp1 NA19078.hp2 NA19079.hp1 NA19079.hp2 NA19081.hp1 NA19081.hp2 NA19083.hp2 NA19084.hp1 NA19086.hp1 NA19086.hp2 NA19087.hp1 NA19087.hp2 NA19089.hp1 NA19089.hp2 NA19090.hp1 NA19090.hp2 NA19091.hp2 NA19240.hp2 NA20129.hp2 NA20300.hp2 NA20752.hp1 NA20752.hp2 NA20905.hp1 NA21309.hp1 NA21309.hp2 homoSapiens_chm13v2.hp1	a0002 a0004 a0005 others(1): Show a0002 a0004 a0005 a0006	a0002c0002 a0002c0008 a0002c0009 others(3): Show a0002c0002 a0002c0008 a0002c0009 a0004c0004 a0005c0007 a0006c0010	a0002c0002t0001 a0002c0002t0002 a0002c0002t0006 others(10): Show a0002c0002t0001 a0002c0002t0002 a0002c0002t0006 a0002c0002t0008 a0002c0002t0011 a0002c0002t0012 a0002c0002t0019 a0002c0002t0021 a0002c0008t0001 a0002c0009t0022 a0004c0004t0001 a0005c0007t0001 a0006c0010t0002	a0002c0002t0001g0004 a0002c0002t0001g0005 a0002c0002t0001g0006 others(175): Show a0002c0002t0001g0004 a0002c0002t0001g0005 a0002c0002t0001g0006 a0002c0002t0001g0010 a0002c0002t0001g0011 a0002c0002t0001g0012 a0002c0002t0001g0013 a0002c0002t0001g0014 a0002c0002t0001g0020 a0002c0002t0001g0021 a0002c0002t0001g0022 a0002c0002t0001g0023 a0002c0002t0001g0024 a0002c0002t0001g0025 a0002c0002t0001g0044 a0002c0002t0001g0046 a0002c0002t0001g0047 a0002c0002t0001g0048 a0002c0002t0001g0049 a0002c0002t0001g0050 a0002c0002t0001g0051 a0002c0002t0001g0052 a0002c0002t0001g0053 a0002c0002t0001g0054 a0002c0002t0001g0055 a0002c0002t0001g0056 a0002c0002t0001g0057 a0002c0002t0001g0058 a0002c0002t0001g0191 a0002c0002t0001g0192 a0002c0002t0001g0193 a0002c0002t0001g0194 a0002c0002t0001g0195 a0002c0002t0001g0200 a0002c0002t0001g0201 a0002c0002t0001g0202 a0002c0002t0001g0203 a0002c0002t0001g0204 a0002c0002t0001g0205 a0002c0002t0001g0206 a0002c0002t0001g0207 a0002c0002t0001g0211 a0002c0002t0001g0212 a0002c0002t0001g0214 a0002c0002t0001g0216 a0002c0002t0001g0220 a0002c0002t0001g0221 a0002c0002t0001g0222 a0002c0002t0001g0223 a0002c0002t0001g0225 a0002c0002t0001g0227 a0002c0002t0001g0228 a0002c0002t0001g0230 a0002c0002t0001g0231 a0002c0002t0001g0233 a0002c0002t0001g0234 a0002c0002t0001g0235 a0002c0002t0001g0236 a0002c0002t0001g0237 a0002c0002t0001g0238 a0002c0002t0001g0239 a0002c0002t0001g0242 a0002c0002t0001g0243 a0002c0002t0001g0244 a0002c0002t0001g0246 a0002c0002t0001g0247 a0002c0002t0001g0248 a0002c0002t0001g0249 a0002c0002t0001g0250 a0002c0002t0001g0251 a0002c0002t0001g0252 a0002c0002t0001g0253 a0002c0002t0001g0254 a0002c0002t0001g0255 a0002c0002t0001g0256 a0002c0002t0001g0257 a0002c0002t0001g0258 a0002c0002t0001g0261 a0002c0002t0001g0262 a0002c0002t0001g0263 a0002c0002t0001g0264 a0002c0002t0001g0265 a0002c0002t0001g0266 a0002c0002t0001g0268 a0002c0002t0001g0269 a0002c0002t0001g0270 a0002c0002t0001g0271 a0002c0002t0001g0272 a0002c0002t0001g0273 a0002c0002t0001g0274 a0002c0002t0001g0275 a0002c0002t0001g0276 a0002c0002t0001g0279 a0002c0002t0001g0280 a0002c0002t0001g0281 a0002c0002t0001g0282 a0002c0002t0001g0284 a0002c0002t0001g0286 a0002c0002t0001g0288 a0002c0002t0001g0289 a0002c0002t0001g0290 a0002c0002t0001g0291 a0002c0002t0001g0292 a0002c0002t0001g0295 a0002c0002t0001g0296 a0002c0002t0001g0297 a0002c0002t0001g0298 a0002c0002t0001g0300 a0002c0002t0001g0301 a0002c0002t0001g0302 a0002c0002t0001g0303 a0002c0002t0001g0304 a0002c0002t0001g0307 a0002c0002t0001g0309 a0002c0002t0001g0310 a0002c0002t0001g0311 a0002c0002t0001g0312 a0002c0002t0001g0316 a0002c0002t0001g0317 a0002c0002t0002g0004 a0002c0002t0002g0005 a0002c0002t0002g0010 a0002c0002t0002g0012 a0002c0002t0002g0013 a0002c0002t0002g0021 a0002c0002t0002g0022 a0002c0002t0002g0027 a0002c0002t0002g0048 a0002c0002t0002g0050 a0002c0002t0002g0058 a0002c0002t0002g0061 a0002c0002t0002g0062 a0002c0002t0002g0063 a0002c0002t0002g0066 a0002c0002t0002g0196 a0002c0002t0002g0198 a0002c0002t0002g0199 a0002c0002t0002g0208 a0002c0002t0002g0209 a0002c0002t0002g0210 a0002c0002t0002g0213 a0002c0002t0002g0215 a0002c0002t0002g0218 a0002c0002t0002g0219 a0002c0002t0002g0226 a0002c0002t0002g0229 a0002c0002t0002g0232 a0002c0002t0002g0240 a0002c0002t0002g0241 a0002c0002t0002g0245 a0002c0002t0002g0259 a0002c0002t0002g0260 a0002c0002t0002g0283 a0002c0002t0002g0285 a0002c0002t0002g0287 a0002c0002t0002g0305 a0002c0002t0002g0313 a0002c0002t0006g0025 a0002c0002t0006g0065 a0002c0002t0006g0068 a0002c0002t0006g0217 a0002c0002t0006g0224 a0002c0002t0006g0277 a0002c0002t0006g0293 a0002c0002t0006g0294 a0002c0002t0008g0028 a0002c0002t0011g0026 a0002c0002t0011g0045 a0002c0002t0012g0064 a0002c0002t0012g0278 a0002c0002t0019g0067 a0002c0002t0021g0028 a0002c0008t0001g0197 a0002c0009t0022g0299 a0004c0004t0001g0026 a0004c0004t0001g0308 a0005c0007t0001g0267 a0006c0010t0002g0306	226	458	0.4935	-10	c.83- others(23): Show c.83-354_83-345delTAATAGGTCA	CLEC4A	ENSG00000111729.15	transcript	ENST00000229332.12	protein_coding	1/5		INFO_REALIGN_3_PRIME	chr12	TogoVar
CLEC4C_chr12_7724383_7752375	7732002	ATGAACAC others(3): Show ATGAACACTCC	A A	intron_variant intron_variant	MODIFIER	HG02922.hp2 HG02922.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0004	a0001c0001t0004g0119 a0001c0001t0004g0119	1	448	0.0022	-10	c.382 others(27): Show c.382-1100_382-1091delGGAGTGTTCA	CLEC4C	ENSG00000198178.11	transcript	ENST00000360345.8	protein_coding	4/5			chr12	TogoVar
CLEC4C_chr12_7724383_7752375	7746213	CAAAAAAA others(3): Show CAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG01891.hp1 HG01891.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0054 a0001c0001t0001g0054	1	448	0.0022	-10	c.124 others(25): Show c.124+108_124+117delTTTTTTTTTT	CLEC4C	ENSG00000198178.11	transcript	ENST00000360345.8	protein_coding	2/5			chr12	TogoVar
CLEC4C_chr12_7724383_7752375	7747632	CTTTTTTT others(3): Show CTTTTTTTTTT	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	NA18946.hp2 NA19088.hp2 NA18946.hp2 NA19088.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0013 a0001c0001t0002g0118 a0001c0001t0002g0013 a0001c0001t0002g0118	2	448	0.0045	-10	c.-29 others(19): Show c.-294_-285delAAAAAAAAAA	CLEC4C	ENSG00000198178.11	transcript	ENST00000360345.8	protein_coding		258		chr12	TogoVar
CLEC4C_chr12_7724383_7752375	7750822	CCAAAAAA others(3): Show CCAAAAAAAAA	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00423.hp2 HG00438.hp1 HG02132.hp1 others(26): Show HG00423.hp2 HG00438.hp1 HG02132.hp1 HG03688.hp1 HG04228.hp2 NA18939.hp2 NA18940.hp1 NA18941.hp2 NA18945.hp2 NA18948.hp2 NA18950.hp2 NA18952.hp1 NA18955.hp1 NA18956.hp2 NA18961.hp2 NA18962.hp1 NA18963.hp1 NA18969.hp2 NA18970.hp2 NA18971.hp1 NA18982.hp1 NA18993.hp1 NA19003.hp2 NA19006.hp2 NA19056.hp2 NA19062.hp2 NA19070.hp2 NA19080.hp1 NA19081.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0006 a0001c0001t0001g0017 a0001c0001t0001g0043 others(13): Show a0001c0001t0001g0006 a0001c0001t0001g0017 a0001c0001t0001g0043 a0001c0001t0001g0044 a0001c0001t0001g0182 a0001c0001t0001g0191 a0001c0001t0001g0193 a0001c0001t0001g0194 a0001c0001t0001g0195 a0001c0001t0001g0197 a0001c0001t0001g0198 a0001c0001t0001g0202 a0001c0001t0001g0203 a0001c0001t0001g0204 a0001c0001t0001g0209 a0001c0001t0001g0239	29	448	0.0647	-10	c.-34 others(21): Show c.-3484_-3475delTTTTTTTTTG	CLEC4C	ENSG00000198178.11	transcript	ENST00000360345.8	protein_coding		3448		chr12	TogoVar
CLEC4F_chr2_70803643_70825599	70805994	TTATCAAA others(3): Show TTATCAAAACA	T T	downstream_gene_variant downstream_gene_variant	MODIFIER	NA18964.hp2 NA18964.hp2	a0002 a0002	a0002c0001 a0002c0001	a0002c0001t0001 a0002c0001t0001	a0002c0001t0001g0112 a0002c0001t0001g0112	1	414	0.0024	-10	c.32 others(21): Show c.3267_*3276delTGTTTTGATA	CLEC4F	ENSG00000152672.8	transcript	ENST00000272367.7	protein_coding		2648		chr2	TogoVar
CLEC4F_chr2_70803643_70825599	70824036	AAGAAAGA others(3): Show AAGAAAGAAAG	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	NA18944.hp1 NA18961.hp2 NA18963.hp2 others(6): Show NA18944.hp1 NA18961.hp2 NA18963.hp2 NA18968.hp2 NA18970.hp2 NA18973.hp1 NA19004.hp2 NA19067.hp1 NA19090.hp2	a0001 a0002 a0001 a0002	a0001c0002 a0002c0001 a0001c0002 a0002c0001	a0001c0002t0001 a0002c0001t0001 a0001c0002t0001 a0002c0001t0001	a0001c0002t0001g0008 a0002c0001t0001g0001 a0002c0001t0001g0002 others(4): Show a0001c0002t0001g0008 a0002c0001t0001g0001 a0002c0001t0001g0002 a0002c0001t0001g0003 a0002c0001t0001g0005 a0002c0001t0001g0114 a0002c0001t0001g0123	9	414	0.0217	-10	c.-35 others(21): Show c.-3523_-3514delCTTTCTTTCT	CLEC4F	ENSG00000152672.8	transcript	ENST00000272367.7	protein_coding		3438		chr2	TogoVar
CLEC4G_chr19_7723957_7737110	7732904	AAAATATA others(3): Show AAAATATATAT	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02280.hp1 HG02451.hp1 NA20129.hp1 HG02280.hp1 HG02451.hp1 NA20129.hp1	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0001 a0001c0003t0001	a0001c0003t0001g0006 a0001c0003t0001g0006	3	432	0.0069	-10	c.-81 others(19): Show c.-812_-803delATATATATTT	CLEC4G	ENSG00000182566.15	transcript	ENST00000328853.11	protein_coding		795		chr19	TogoVar
CLEC4G_chr19_7723957_7737110	7737002	CTATTTTT others(3): Show CTATTTTTTTT	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00099.hp1 HG00140.hp1 HG00140.hp2 others(158): Show HG00099.hp1 HG00140.hp1 HG00140.hp2 HG00280.hp1 HG00280.hp2 HG00323.hp1 HG00438.hp1 HG00438.hp2 HG00544.hp1 HG00558.hp1 HG00639.hp2 HG00673.hp1 HG00735.hp1 HG00735.hp2 HG00738.hp1 HG00738.hp2 HG00741.hp1 HG00741.hp2 HG01069.hp1 HG01069.hp2 HG01070.hp2 HG01071.hp2 HG01074.hp2 HG01099.hp2 HG01106.hp1 HG01123.hp1 HG01168.hp1 HG01168.hp2 HG01169.hp1 HG01175.hp2 HG01192.hp1 HG01243.hp1 HG01243.hp2 HG01256.hp2 HG01261.hp1 HG01346.hp2 HG01358.hp2 HG01361.hp1 HG01361.hp2 HG01433.hp1 HG01516.hp1 HG01516.hp2 HG01517.hp1 HG01884.hp1 HG01884.hp2 HG01928.hp2 HG01934.hp1 HG01943.hp1 HG01943.hp2 HG01952.hp1 HG01952.hp2 HG01975.hp1 HG01975.hp2 HG01978.hp1 HG01978.hp2 HG01993.hp2 HG02004.hp1 HG02004.hp2 HG02040.hp1 HG02056.hp1 HG02080.hp2 HG02145.hp2 HG02148.hp1 HG02165.hp1 HG02257.hp2 HG02258.hp1 HG02273.hp2 HG02293.hp1 HG02293.hp2 HG02300.hp1 HG02300.hp2 HG02486.hp2 HG02602.hp1 HG02615.hp1 HG02683.hp1 HG02683.hp2 HG02698.hp1 HG02698.hp2 HG02735.hp1 HG02738.hp1 HG02809.hp1 HG02818.hp1 HG02886.hp1 HG02895.hp2 HG02897.hp2 HG02965.hp2 HG02976.hp2 HG03017.hp1 HG03041.hp1 HG03130.hp1 HG03130.hp2 HG03139.hp1 HG03195.hp2 HG03225.hp2 HG03239.hp2 HG03471.hp2 HG03486.hp2 HG03490.hp1 HG03490.hp2 HG03492.hp1 HG03516.hp2 HG03654.hp1 HG03654.hp2 HG03669.hp1 HG03669.hp2 HG03688.hp1 HG03688.hp2 HG03704.hp1 HG03704.hp2 HG03831.hp1 HG03834.hp2 HG04115.hp2 HG04204.hp1 HG04204.hp2 HG04228.hp1 HG04228.hp2 HG06807.hp2 NA18906.hp1 NA18906.hp2 NA18940.hp1 NA18941.hp2 NA18948.hp1 NA18948.hp2 NA18951.hp2 NA18952.hp1 NA18959.hp1 NA18977.hp1 NA18978.hp2 NA18981.hp1 NA18990.hp1 NA18995.hp1 NA18997.hp2 NA18998.hp2 NA19002.hp2 NA19005.hp1 NA19010.hp1 NA19030.hp2 NA19043.hp2 NA19056.hp1 NA19057.hp1 NA19057.hp2 NA19065.hp2 NA19067.hp1 NA19068.hp2 NA19072.hp2 NA19074.hp1 NA19082.hp1 NA19083.hp1 NA19084.hp2 NA19085.hp2 NA19087.hp1 NA19088.hp1 NA19089.hp2 NA19090.hp1 NA19091.hp2 NA20129.hp2 NA20805.hp1 NA20905.hp2 NA21309.hp1 NA21309.hp2 homoSapiens_chm13v2.hp1	a0001 a0005 a0006 a0001 a0005 a0006	a0001c0001 a0001c0004 a0005c0009 others(1): Show a0001c0001 a0001c0004 a0005c0009 a0006c0007	a0001c0001t0001 a0001c0001t0005 a0001c0004t0001 others(2): Show a0001c0001t0001 a0001c0001t0005 a0001c0004t0001 a0005c0009t0004 a0006c0007t0001	a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0004 others(8): Show a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0004 a0001c0001t0001g0028 a0001c0001t0001g0029 a0001c0001t0001g0033 a0001c0001t0001g0035 a0001c0001t0005g0034 a0001c0004t0001g0008 a0005c0009t0004g0018 a0006c0007t0001g0014	161	432	0.3727	-10	c.-49 others(21): Show c.-4910_-4901delAAAAAAAATA	CLEC4G	ENSG00000182566.15	transcript	ENST00000328853.11	protein_coding		4893		chr19	TogoVar
CLEC4M_chr19_7758243_7774605	7770659	ATTTTTTC others(3): Show ATTTTTTCTTT	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	NA19011.hp2 NA19011.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0011 a0001c0001t0002g0011	1	460	0.0022	-10	c.16 others(21): Show c.1672_*1681delTTTTTTCTTT	CLEC4M	ENSG00000104938.18	transcript	ENST00000327325.10	protein_coding		1055		chr19	TogoVar
CLEC5A_chr7_141922357_141951974	141933575	CATATATA others(3): Show CATATATATAT	C C	intron_variant intron_variant	MODIFIER	HG00099.hp1 HG01168.hp1 HG01261.hp2 others(18): Show HG00099.hp1 HG01168.hp1 HG01261.hp2 HG01346.hp2 HG01361.hp2 HG02698.hp2 HG02723.hp1 HG02735.hp2 HG02818.hp2 HG02896.hp1 HG03239.hp1 HG03453.hp2 HG03710.hp1 HG03834.hp1 HG03942.hp2 HG04204.hp1 HG04228.hp1 NA18747.hp1 NA19043.hp2 NA20752.hp1 NA21309.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0007 a0001c0001t0014 others(2): Show a0001c0001t0001 a0001c0001t0007 a0001c0001t0014 a0001c0001t0016 a0001c0001t0025	a0001c0001t0001g0014 a0001c0001t0001g0045 a0001c0001t0001g0071 others(12): Show a0001c0001t0001g0014 a0001c0001t0001g0045 a0001c0001t0001g0071 a0001c0001t0001g0093 a0001c0001t0001g0100 a0001c0001t0001g0105 a0001c0001t0001g0107 a0001c0001t0001g0154 a0001c0001t0001g0166 a0001c0001t0007g0163 a0001c0001t0014g0053 a0001c0001t0014g0094 a0001c0001t0014g0101 a0001c0001t0016g0164 a0001c0001t0025g0095	21	386	0.0544	-10	c.346 others(27): Show c.346-1759_346-1750delATATATATAT	CLEC5A	ENSG00000258227.7	transcript	ENST00000546910.6	protein_coding	5/6			chr7	TogoVar
CLEC9A_chr12_10025682_10071031	10029257	GTGTATAT others(3): Show GTGTATATATA	G G	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01261.hp1 HG02145.hp1 HG03098.hp1 HG01261.hp1 HG02145.hp1 HG03098.hp1	a0001 a0003 a0001 a0003	a0001c0002 a0003c0004 a0001c0002 a0003c0004	a0001c0002t0001 a0003c0004t0001 a0001c0002t0001 a0003c0004t0001	a0001c0002t0001g0040 a0003c0004t0001g0140 a0003c0004t0001g0181 a0001c0002t0001g0040 a0003c0004t0001g0140 a0003c0004t0001g0181	3	406	0.0074	-10	c.-20 others(21): Show c.-2032_-2023delTGTATATATA	CLEC9A	ENSG00000197992.7	transcript	ENST00000355819.6	protein_coding		1424		chr12	TogoVar
CLEC9A_chr12_10025682_10071031	10029259	GTATATAT others(3): Show GTATATATATA	G G	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00738.hp2 HG01109.hp1 HG01169.hp2 others(1): Show HG00738.hp2 HG01109.hp1 HG01169.hp2 NA21309.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0032 a0001c0001t0001g0104 a0001c0001t0001g0105 others(1): Show a0001c0001t0001g0032 a0001c0001t0001g0104 a0001c0001t0001g0105 a0001c0001t0001g0127	4	406	0.0099	-10	c.-20 others(21): Show c.-2030_-2021delTATATATATA	CLEC9A	ENSG00000197992.7	transcript	ENST00000355819.6	protein_coding		1422		chr12	TogoVar
CLGN_chr4_140383453_140432648	140396897	ATATATAT others(3): Show ATATATATATG	A A	intron_variant intron_variant	MODIFIER	HG01243.hp2 HG01496.hp1 HG02717.hp1 others(1): Show HG01243.hp2 HG01496.hp1 HG02717.hp1 HG02922.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0036 a0001c0001t0001g0199 a0001c0001t0001g0201 a0001c0001t0001g0036 a0001c0001t0001g0199 a0001c0001t0001g0201	4	358	0.0112	-10	c.885 others(25): Show c.885-702_885-693delCATATATATA	CLGN	ENSG00000153132.13	transcript	ENST00000325617.10	protein_coding	8/14			chr4	TogoVar
CLGN_chr4_140383453_140432648	140429883	CAAAAAAA others(3): Show CAAAAAAAAAA	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03225.hp1 HG03225.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0038 a0001c0001t0001g0038	1	358	0.0028	-10	c.-23 others(21): Show c.-2366_-2357delTTTTTTTTTT	CLGN	ENSG00000153132.13	transcript	ENST00000325617.10	protein_coding		2236		chr4	TogoVar
CLHC1_chr2_55167547_55237293	55179090	TAAATTCT others(3): Show TAAATTCTAAG	T T	intron_variant intron_variant	MODIFIER	HG04228.hp1 HG04228.hp1	a0014 a0014	a0014c0022 a0014c0022	a0014c0022t0005 a0014c0022t0005	a0014c0022t0005g0145 a0014c0022t0005g0145	1	404	0.0025	-10	c.138 others(29): Show c.1385-1319_1385-1310delCTTAGAATTT	CLHC1	ENSG00000162994.16	transcript	ENST00000401408.6	protein_coding	11/12			chr2	TogoVar
CLHC1_chr2_55167547_55237293	55186753	TGACAGAG others(3): Show TGACAGAGTGA	T T	intron_variant intron_variant	MODIFIER	HG02965.hp1 HG02965.hp1	a0002 a0002	a0002c0001 a0002c0001	a0002c0001t0005 a0002c0001t0005	a0002c0001t0005g0274 a0002c0001t0005g0274	1	404	0.0025	-10	c.100 others(29): Show c.1007-5019_1007-5010delTCACTCTGTC	CLHC1	ENSG00000162994.16	transcript	ENST00000401408.6	protein_coding	9/12			chr2	TogoVar
CLHC1_chr2_55167547_55237293	55187279	CAAATAAA others(3): Show CAAATAAAATA	C C	intron_variant intron_variant	MODIFIER	HG01891.hp1 HG03209.hp2 HG01891.hp1 HG03209.hp2	a0002 a0002	a0002c0001 a0002c0001	a0002c0001t0001 a0002c0001t0001	a0002c0001t0001g0272 a0002c0001t0001g0273 a0002c0001t0001g0272 a0002c0001t0001g0273	2	404	0.0050	-10	c.100 others(29): Show c.1007-5545_1007-5536delTATTTTATTT	CLHC1	ENSG00000162994.16	transcript	ENST00000401408.6	protein_coding	9/12			chr2	TogoVar
CLHC1_chr2_55167547_55237293	55217546	AAAAAAAA others(3): Show AAAAAAAATAT	A A	intron_variant intron_variant	MODIFIER	HG03710.hp2 HG03710.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0022 a0001c0002t0022	a0001c0002t0022g0373 a0001c0002t0022g0373	1	404	0.0025	-10	c.365 others(25): Show c.365+255_365+264delATATTTTTTT	CLHC1	ENSG00000162994.16	transcript	ENST00000401408.6	protein_coding	4/12			chr2	TogoVar
CLHC1_chr2_55167547_55237293	55217548	AAAAAATA others(3): Show AAAAAATATAT	A A	intron_variant intron_variant	MODIFIER	HG02132.hp1 HG02132.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0002 a0001c0002t0002	a0001c0002t0002g0348 a0001c0002t0002g0348	1	404	0.0025	-10	c.365 others(25): Show c.365+253_365+262delATATATTTTT	CLHC1	ENSG00000162994.16	transcript	ENST00000401408.6	protein_coding	4/12			chr2	TogoVar
CLHC1_chr2_55167547_55237293	55217550	AAAATATA others(3): Show AAAATATATAT	A A	intron_variant intron_variant	MODIFIER	HG01243.hp2 HG02886.hp1 HG02965.hp2 others(3): Show HG01243.hp2 HG02886.hp1 HG02965.hp2 HG03209.hp2 NA18906.hp1 NA18966.hp2	a0001 a0002 a0005 a0001 a0002 a0005	a0001c0002 a0002c0001 a0005c0009 a0001c0002 a0002c0001 a0005c0009	a0001c0002t0002 a0002c0001t0001 a0002c0001t0005 others(1): Show a0001c0002t0002 a0002c0001t0001 a0002c0001t0005 a0005c0009t0002	a0001c0002t0002g0351 a0002c0001t0001g0273 a0002c0001t0005g0271 others(3): Show a0001c0002t0002g0351 a0002c0001t0001g0273 a0002c0001t0005g0271 a0002c0001t0005g0282 a0005c0009t0002g0355 a0005c0009t0002g0379	6	404	0.0149	-10	c.365 others(25): Show c.365+251_365+260delATATATATTT	CLHC1	ENSG00000162994.16	transcript	ENST00000401408.6	protein_coding	4/12			chr2	TogoVar
CLHC1_chr2_55167547_55237293	55217552	AATATATA others(3): Show AATATATATAT	A A	intron_variant intron_variant	MODIFIER	HG03516.hp1 NA18975.hp1 HG03516.hp1 NA18975.hp1	a0002 a0005 a0002 a0005	a0002c0001 a0005c0009 a0002c0001 a0005c0009	a0002c0001t0005 a0005c0009t0013 a0002c0001t0005 a0005c0009t0013	a0002c0001t0005g0286 a0005c0009t0013g0382 a0002c0001t0005g0286 a0005c0009t0013g0382	2	404	0.0050	-10	c.365 others(25): Show c.365+249_365+258delATATATATAT	CLHC1	ENSG00000162994.16	transcript	ENST00000401408.6	protein_coding	4/12			chr2	TogoVar
CLIC1_chr6_31725599_31741530	31741336	TACACACA others(3): Show TACACACACAC	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00642.hp1 HG01081.hp1 HG01243.hp2 others(16): Show HG00642.hp1 HG01081.hp1 HG01243.hp2 HG01358.hp1 HG01884.hp1 HG01952.hp1 HG02723.hp2 HG02809.hp2 HG03209.hp1 HG03209.hp2 HG03579.hp2 NA18945.hp2 NA18993.hp1 NA18994.hp2 NA19003.hp2 NA19065.hp1 NA19079.hp2 NA19086.hp2 NA20129.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0006 a0001c0001t0001g0013 others(7): Show a0001c0001t0001g0001 a0001c0001t0001g0006 a0001c0001t0001g0013 a0001c0001t0001g0020 a0001c0001t0001g0023 a0001c0001t0001g0025 a0001c0001t0001g0037 a0001c0001t0001g0055 a0001c0001t0001g0059 a0001c0001t0001g0074	19	395	0.0481	-10	c.-50 others(21): Show c.-5046_-5037delGTGTGTGTGT	CLIC1	ENSG00000213719.8	transcript	ENST00000375784.8	protein_coding		4807		chr6	TogoVar
CLIC2_chrX_155271211_155339614	155275984	TATTCACA others(3): Show TATTCACATTG	T T	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02922.hp1 HG03098.hp1 NA19240.hp2 HG02922.hp1 HG03098.hp1 NA19240.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0040 a0001c0001t0001g0042 a0001c0001t0001g0157 a0001c0001t0001g0040 a0001c0001t0001g0042 a0001c0001t0001g0157	3	258	0.0116	-10	c.19 others(21): Show c.1909_*1918delCAATGTGAAT	CLIC2	ENSG00000155962.13	transcript	ENST00000369449.7	protein_coding		226		chrX	TogoVar
CLIC2_chrX_155271211_155339614	155325761	GATATATA others(3): Show GATATATATAT	G G	intron_variant intron_variant	MODIFIER	HG01243.hp1 HG01515.hp1 HG01516.hp2 others(18): Show HG01243.hp1 HG01515.hp1 HG01516.hp2 HG01517.hp1 HG02056.hp1 HG02523.hp2 HG02896.hp2 HG02897.hp1 HG02922.hp1 HG03041.hp2 HG03209.hp1 HG03225.hp1 HG03471.hp1 HG03540.hp2 HG03704.hp1 HG04184.hp2 HG04199.hp1 NA18985.hp1 NA19030.hp1 NA19079.hp1 NA20300.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0010 a0001c0001t0001 a0001c0001t0002 a0001c0001t0010	a0001c0001t0001g0002 a0001c0001t0001g0027 a0001c0001t0001g0029 others(15): Show a0001c0001t0001g0002 a0001c0001t0001g0027 a0001c0001t0001g0029 a0001c0001t0001g0030 a0001c0001t0001g0032 a0001c0001t0001g0033 a0001c0001t0001g0036 a0001c0001t0001g0040 a0001c0001t0001g0114 a0001c0001t0001g0115 a0001c0001t0001g0116 a0001c0001t0001g0117 a0001c0001t0001g0118 a0001c0001t0001g0119 a0001c0001t0001g0120 a0001c0001t0001g0142 a0001c0001t0002g0004 a0001c0001t0010g0031	21	258	0.0814	-10	c.57+ others(25): Show c.57+8600_57+8609delATATATATAT	CLIC2	ENSG00000155962.13	transcript	ENST00000369449.7	protein_coding	1/5			chrX	TogoVar
CLIC3_chr9_136989608_137001568	136998478	TGCGTGGC others(3): Show TGCGTGGCGTG	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00438.hp1 HG00438.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0001	1	398	0.0025	-10	c.-19 others(21): Show c.-1945_-1936delCACGCCACGC	CLIC3	ENSG00000169583.13	transcript	ENST00000494426.2	protein_coding		1911		chr9	TogoVar
CLIC3_chr9_136989608_137001568	137000674	CTTTTTTT others(3): Show CTTTTTTTTTT	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02145.hp1 NA18522.hp1 HG02145.hp1 NA18522.hp1	a0001 a0001	a0001c0007 a0001c0007	a0001c0007t0001 a0001c0007t0001	a0001c0007t0001g0011 a0001c0007t0001g0011	2	398	0.0050	-10	c.-41 others(21): Show c.-4141_-4132delAAAAAAAAAA	CLIC3	ENSG00000169583.13	transcript	ENST00000494426.2	protein_coding		4107		chr9	TogoVar
CLIC4_chr1_24740447_24849321	24766473	GTTTTTTT others(3): Show GTTTTTTTTTT	G G	intron_variant intron_variant	MODIFIER	HG00140.hp1 HG00323.hp1 HG00423.hp1 others(63): Show HG00140.hp1 HG00323.hp1 HG00423.hp1 HG00597.hp2 HG00741.hp2 HG01081.hp1 HG01109.hp2 HG01168.hp2 HG01192.hp2 HG01243.hp1 HG01243.hp2 HG01516.hp1 HG01928.hp1 HG01978.hp2 HG02015.hp1 HG02083.hp2 HG02148.hp1 HG02165.hp1 HG02273.hp1 HG02293.hp2 HG02300.hp2 HG02647.hp2 HG02698.hp1 HG02735.hp1 HG02735.hp2 HG03017.hp2 HG03098.hp1 HG03453.hp2 HG03471.hp1 HG03486.hp1 HG03540.hp2 HG03688.hp1 HG03704.hp2 NA18747.hp1 NA18941.hp1 NA18943.hp2 NA18944.hp2 NA18947.hp1 NA18948.hp2 NA18950.hp2 NA18951.hp2 NA18952.hp1 NA18953.hp2 NA18961.hp2 NA18968.hp1 NA18975.hp1 NA18978.hp2 NA18979.hp2 NA18982.hp1 NA18983.hp1 NA18987.hp2 NA18993.hp1 NA19003.hp2 NA19006.hp2 NA19010.hp2 NA19043.hp1 NA19054.hp2 NA19057.hp1 NA19062.hp2 NA19065.hp2 NA19070.hp2 NA19077.hp2 NA19082.hp1 NA19085.hp1 NA19089.hp1 NA19090.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 others(3): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 a0001c0001t0007 a0001c0001t0016 a0001c0001t0018	a0001c0001t0001g0005 a0001c0001t0001g0007 a0001c0001t0001g0016 others(63): Show a0001c0001t0001g0005 a0001c0001t0001g0007 a0001c0001t0001g0016 a0001c0001t0001g0027 a0001c0001t0001g0028 a0001c0001t0001g0029 a0001c0001t0001g0030 a0001c0001t0001g0031 a0001c0001t0001g0032 a0001c0001t0001g0033 a0001c0001t0001g0034 a0001c0001t0001g0035 a0001c0001t0001g0036 a0001c0001t0001g0043 a0001c0001t0001g0045 a0001c0001t0001g0046 a0001c0001t0001g0049 a0001c0001t0001g0050 a0001c0001t0001g0051 a0001c0001t0001g0054 a0001c0001t0001g0057 a0001c0001t0001g0058 a0001c0001t0001g0060 a0001c0001t0001g0061 a0001c0001t0001g0062 a0001c0001t0001g0063 a0001c0001t0001g0064 a0001c0001t0001g0066 a0001c0001t0001g0068 a0001c0001t0001g0070 a0001c0001t0001g0072 a0001c0001t0001g0073 a0001c0001t0001g0074 a0001c0001t0001g0079 a0001c0001t0001g0080 a0001c0001t0001g0082 a0001c0001t0001g0083 a0001c0001t0001g0084 a0001c0001t0001g0085 a0001c0001t0001g0088 a0001c0001t0001g0256 a0001c0001t0001g0271 a0001c0001t0001g0272 a0001c0001t0001g0273 a0001c0001t0001g0274 a0001c0001t0001g0275 a0001c0001t0001g0279 a0001c0001t0001g0280 a0001c0001t0001g0284 a0001c0001t0001g0286 a0001c0001t0001g0287 a0001c0001t0001g0289 a0001c0001t0001g0304 a0001c0001t0001g0310 a0001c0001t0001g0316 a0001c0001t0001g0317 a0001c0001t0001g0323 a0001c0001t0002g0059 a0001c0001t0002g0116 a0001c0001t0002g0157 a0001c0001t0002g0221 a0001c0001t0004g0334 a0001c0001t0004g0339 a0001c0001t0007g0335 a0001c0001t0016g0087 a0001c0001t0018g0288	66	344	0.1919	-10	c.72+ others(27): Show c.72+20887_72+20896delTTTTTTTTTT	CLIC4	ENSG00000169504.15	transcript	ENST00000374379.9	protein_coding	1/5		INFO_REALIGN_3_PRIME	chr1	TogoVar
CLIC4_chr1_24740447_24849321	24785854	CAAAAAAA others(3): Show CAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG04204.hp2 HG04228.hp2 HG04204.hp2 HG04228.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0011 a0001c0001t0011	a0001c0001t0011g0307 a0001c0001t0011g0309 a0001c0001t0011g0307 a0001c0001t0011g0309	2	344	0.0058	-10	c.73- others(27): Show c.73-11875_73-11866delAAAAAAAAAA	CLIC4	ENSG00000169504.15	transcript	ENST00000374379.9	protein_coding	1/5		INFO_REALIGN_3_PRIME	chr1	TogoVar
CLIC4_chr1_24740447_24849321	24800226	GCCCCCCC others(3): Show GCCCCCCCACC	G G	intron_variant intron_variant	MODIFIER	HG02630.hp2 HG03098.hp1 HG02630.hp2 HG03098.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0116 a0001c0001t0002g0182 a0001c0001t0002g0116 a0001c0001t0002g0182	2	344	0.0058	-10	c.182 others(27): Show c.182+2376_182+2385delCCCCCCCACC	CLIC4	ENSG00000169504.15	transcript	ENST00000374379.9	protein_coding	2/5			chr1	TogoVar
CLIC4_chr1_24740447_24849321	24820067	GTATATAT others(3): Show GTATATATATA	G G	intron_variant intron_variant	MODIFIER	HG01109.hp1 HG01109.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0005 a0001c0001t0005	a0001c0001t0005g0092 a0001c0001t0005g0092	1	344	0.0029	-10	c.308 others(27): Show c.308+5850_308+5859delATATATATAT	CLIC4	ENSG00000169504.15	transcript	ENST00000374379.9	protein_coding	3/5		INFO_REALIGN_3_PRIME	chr1	TogoVar
CLIC5_chr6_45893456_46020860	45958422	TTATATAT others(3): Show TTATATATATA	T T	intron_variant intron_variant	MODIFIER	HG01109.hp2 HG03017.hp1 NA18953.hp2 others(4): Show HG01109.hp2 HG03017.hp1 NA18953.hp2 NA19057.hp2 NA19060.hp1 NA19065.hp2 NA19080.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0005 a0001c0001t0001 a0001c0001t0002 a0001c0001t0005	a0001c0001t0001g0057 a0001c0001t0001g0180 a0001c0001t0002g0283 others(4): Show a0001c0001t0001g0057 a0001c0001t0001g0180 a0001c0001t0002g0283 a0001c0001t0002g0285 a0001c0001t0002g0286 a0001c0001t0005g0100 a0001c0001t0005g0234	7	340	0.0206	-10	c.64- others(25): Show c.64-3188_64-3179delTATATATATA	CLIC5	ENSG00000112782.19	transcript	ENST00000339561.12	protein_coding	1/5			chr6	TogoVar
CLIC5_chr6_45893456_46020860	45974493	GTGTGTAT others(3): Show GTGTGTATATA	G G	intron_variant intron_variant	MODIFIER	HG01346.hp1 HG01358.hp2 HG02647.hp1 others(3): Show HG01346.hp1 HG01358.hp2 HG02647.hp1 HG03688.hp2 NA18992.hp1 NA19003.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0003 a0001c0001t0033 others(1): Show a0001c0001t0002 a0001c0001t0003 a0001c0001t0033 a0001c0001t0042	a0001c0001t0002g0231 a0001c0001t0002g0295 a0001c0001t0003g0068 others(3): Show a0001c0001t0002g0231 a0001c0001t0002g0295 a0001c0001t0003g0068 a0001c0001t0003g0236 a0001c0001t0033g0083 a0001c0001t0042g0008	6	340	0.0177	-10	c.64- others(27): Show c.64-19259_64-19250delTATATACACA	CLIC5	ENSG00000112782.19	transcript	ENST00000339561.12	protein_coding	1/5			chr6	TogoVar
CLIC5_chr6_45893456_46020860	45974522	TAGAGAGA others(3): Show TAGAGAGAGAG	T T	intron_variant intron_variant	MODIFIER	HG01261.hp2 HG01928.hp1 HG02622.hp2 others(7): Show HG01261.hp2 HG01928.hp1 HG02622.hp2 HG02895.hp2 HG02965.hp2 HG02976.hp1 HG03098.hp1 HG04204.hp1 NA18953.hp1 NA20752.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 others(3): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 a0001c0001t0009 a0001c0001t0011 a0001c0001t0013	a0001c0001t0001g0115 a0001c0001t0001g0312 a0001c0001t0002g0020 others(7): Show a0001c0001t0001g0115 a0001c0001t0001g0312 a0001c0001t0002g0020 a0001c0001t0002g0298 a0001c0001t0004g0255 a0001c0001t0009g0296 a0001c0001t0009g0297 a0001c0001t0011g0195 a0001c0001t0011g0196 a0001c0001t0013g0040	10	340	0.0294	-10	c.64- others(27): Show c.64-19288_64-19279delCTCTCTCTCT	CLIC5	ENSG00000112782.19	transcript	ENST00000339561.12	protein_coding	1/5			chr6	TogoVar
CLIC5_chr6_45893456_46020860	46006108	ATATACAC others(3): Show ATATACACATG	A A	intron_variant intron_variant	MODIFIER	HG03942.hp1 NA18950.hp1 NA18999.hp2 HG03942.hp1 NA18950.hp1 NA18999.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0003 a0001c0001t0010 a0001c0001t0002 a0001c0001t0003 a0001c0001t0010	a0001c0001t0002g0216 a0001c0001t0003g0232 a0001c0001t0010g0233 a0001c0001t0002g0216 a0001c0001t0003g0232 a0001c0001t0010g0233	3	340	0.0088	-10	c.63+ others(25): Show c.63+9362_63+9371delCATGTGTATA	CLIC5	ENSG00000112782.19	transcript	ENST00000339561.12	protein_coding	1/5			chr6	TogoVar
CLIC5_chr6_45893456_46020860	46006681	CTTTTTTT others(3): Show CTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG03041.hp1 HG03041.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0030 a0001c0001t0030	a0001c0001t0030g0029 a0001c0001t0030g0029	1	340	0.0029	-10	c.63+ others(25): Show c.63+8789_63+8798delAAAAAAAAAA	CLIC5	ENSG00000112782.19	transcript	ENST00000339561.12	protein_coding	1/5			chr6	TogoVar
CLIC6_chr21_34663994_34723223	34671133	AAAAAAAA others(3): Show AAAAAAAAAAG	A A	intron_variant intron_variant	MODIFIER	HG02809.hp1 HG02809.hp1	a0010 a0010	a0010c0032 a0010c0032	a0010c0032t0059 a0010c0032t0059	a0010c0032t0059g0030 a0010c0032t0059g0030	1	312	0.0032	-10	c.137 others(27): Show c.1374+374_1374+383delAAAAAAAGAA	CLIC6	ENSG00000159212.13	transcript	ENST00000349499.3	protein_coding	1/5		INFO_REALIGN_3_PRIME	chr21	TogoVar
CLIC6_chr21_34663994_34723223	34682799	CCATTTTT others(3): Show CCATTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG02970.hp2 HG03195.hp2 NA19043.hp2 HG02970.hp2 HG03195.hp2 NA19043.hp2	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0021 a0001c0003t0021	a0001c0003t0021g0184 a0001c0003t0021g0185 a0001c0003t0021g0186 a0001c0003t0021g0184 a0001c0003t0021g0185 a0001c0003t0021g0186	3	312	0.0096	-10	c.137 others(31): Show c.1374+12038_1374+12047delCATTTTTTTT	CLIC6	ENSG00000159212.13	transcript	ENST00000349499.3	protein_coding	1/5			chr21	TogoVar
CLIC6_chr21_34663994_34723223	34701308	CAAAAAAA others(3): Show CAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG02886.hp1 HG02886.hp1	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0006 a0001c0003t0006	a0001c0003t0006g0122 a0001c0003t0006g0122	1	312	0.0032	-10	c.137 others(29): Show c.1375-5955_1375-5946delAAAAAAAAAA	CLIC6	ENSG00000159212.13	transcript	ENST00000349499.3	protein_coding	1/5		INFO_REALIGN_3_PRIME	chr21	TogoVar
CLIC6_chr21_34663994_34723223	34718631	AAAATGAA others(3): Show AAAATGAAATG	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01255.hp1 HG01361.hp2 HG03017.hp2 others(4): Show HG01255.hp1 HG01361.hp2 HG03017.hp2 HG03669.hp2 NA18969.hp1 NA18991.hp1 NA19012.hp1	a0001 a0002 a0007 a0001 a0002 a0007	a0001c0001 a0002c0004 a0007c0010 a0001c0001 a0002c0004 a0007c0010	a0001c0001t0002 a0001c0001t0007 a0001c0001t0033 others(2): Show a0001c0001t0002 a0001c0001t0007 a0001c0001t0033 a0002c0004t0023 a0007c0010t0005	a0001c0001t0002g0140 a0001c0001t0002g0210 a0001c0001t0007g0098 others(3): Show a0001c0001t0002g0140 a0001c0001t0002g0210 a0001c0001t0007g0098 a0001c0001t0033g0149 a0002c0004t0023g0019 a0007c0010t0005g0108	7	312	0.0224	-10	c.21 others(21): Show c.2150_*2159delAAATGAAATG	CLIC6	ENSG00000159212.13	transcript	ENST00000349499.3	protein_coding		409		chr21	TogoVar
CLIC6_chr21_34663994_34723223	34718677	AAATGAAA others(3): Show AAATGAAAAAC	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01255.hp2 NA18943.hp2 HG01255.hp2 NA18943.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0012 a0001c0001t0001 a0001c0001t0012	a0001c0001t0001g0060 a0001c0001t0012g0150 a0001c0001t0001g0060 a0001c0001t0012g0150	2	312	0.0064	-10	c.21 others(21): Show c.2196_*2205delAATGAAAAAC	CLIC6	ENSG00000159212.13	transcript	ENST00000349499.3	protein_coding		455		chr21	TogoVar
CLIC6_chr21_34663994_34723223	34718687	CAAAATAA others(3): Show CAAAATAAAAT	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00621.hp1 HG00639.hp1 HG00639.hp2 others(18): Show HG00621.hp1 HG00639.hp1 HG00639.hp2 HG01175.hp2 HG01496.hp2 HG01934.hp2 HG01952.hp1 HG01978.hp1 HG01981.hp1 HG02145.hp1 HG02273.hp1 HG02293.hp1 HG02300.hp2 HG02630.hp2 HG02886.hp1 HG03540.hp2 HG04115.hp2 NA18612.hp2 NA18994.hp1 NA19058.hp1 NA21309.hp2	a0001 a0005 a0001 a0005	a0001c0001 a0001c0003 a0001c0031 others(1): Show a0001c0001 a0001c0003 a0001c0031 a0005c0008	a0001c0001t0001 a0001c0001t0005 a0001c0001t0009 others(9): Show a0001c0001t0001 a0001c0001t0005 a0001c0001t0009 a0001c0001t0014 a0001c0001t0017 a0001c0001t0020 a0001c0003t0006 a0001c0003t0011 a0001c0003t0072 a0001c0031t0005 a0005c0008t0027 a0005c0008t0047	a0001c0001t0001g0051 a0001c0001t0001g0104 a0001c0001t0001g0147 others(18): Show a0001c0001t0001g0051 a0001c0001t0001g0104 a0001c0001t0001g0147 a0001c0001t0001g0200 a0001c0001t0005g0046 a0001c0001t0009g0040 a0001c0001t0009g0062 a0001c0001t0009g0071 a0001c0001t0009g0083 a0001c0001t0009g0088 a0001c0001t0009g0111 a0001c0001t0014g0052 a0001c0001t0017g0039 a0001c0001t0020g0182 a0001c0003t0006g0122 a0001c0003t0011g0094 a0001c0003t0011g0203 a0001c0003t0072g0076 a0001c0031t0005g0089 a0005c0008t0027g0022 a0005c0008t0047g0021	21	312	0.0673	-10	c.22 others(21): Show c.2206_*2215delAAAATAAAAT	CLIC6	ENSG00000159212.13	transcript	ENST00000349499.3	protein_coding		465		chr21	TogoVar
CLINT1_chr5_157780747_157864145	157788968	GAAAAAAA others(3): Show GAAAAAAAAAA	G G	intron_variant intron_variant	MODIFIER	HG01109.hp2 HG02451.hp2 HG02486.hp1 others(17): Show HG01109.hp2 HG02451.hp2 HG02486.hp1 HG02615.hp2 HG02717.hp2 HG02809.hp1 HG02886.hp1 HG02896.hp1 HG02897.hp1 HG02922.hp1 HG02922.hp2 HG02965.hp2 HG02976.hp2 HG03098.hp2 HG03471.hp2 HG03486.hp1 HG03516.hp1 NA18522.hp1 NA19240.hp2 NA20129.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0004 a0001c0001 a0001c0002 a0001c0004	a0001c0001t0003 a0001c0002t0003 a0001c0004t0003 a0001c0001t0003 a0001c0002t0003 a0001c0004t0003	a0001c0001t0003g0044 a0001c0001t0003g0045 a0001c0001t0003g0047 others(17): Show a0001c0001t0003g0044 a0001c0001t0003g0045 a0001c0001t0003g0047 a0001c0001t0003g0048 a0001c0001t0003g0094 a0001c0001t0003g0210 a0001c0002t0003g0052 a0001c0002t0003g0053 a0001c0002t0003g0054 a0001c0002t0003g0055 a0001c0002t0003g0056 a0001c0002t0003g0057 a0001c0002t0003g0058 a0001c0002t0003g0073 a0001c0002t0003g0074 a0001c0002t0003g0075 a0001c0002t0003g0076 a0001c0002t0003g0080 a0001c0002t0003g0081 a0001c0004t0003g0072	20	340	0.0588	-10	c.153 others(27): Show c.1531+385_1531+394delTTTTTTTTTT	CLINT1	ENSG00000113282.14	transcript	ENST00000411809.7	protein_coding	11/11			chr5	TogoVar

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