Joint Open Genome and Omics Platform (JoGo)

Search by Variant

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Chr

Chromosome name (e.g., chr11).

Snpeff genename

Exact SnpEff gene name.

Sampleids

Target sampleid (e.g. HG02615).

Snpeff haplotype class

Haplotype-annotation class (e.g., ahapid, ahapid+chapid).

Snpeff annotation impact

Exact impact level (e.g., HIGH, MODERATE, LOW).

Snpeff annotation impact detail

Keyword match in SnpEff annotation.

Hapid

One or more haplotype IDs (comma-separated; e.g., a0001, a01, a0001c0001, a01c02, a1c2, a0001c0001t0005, a0001c0001t0005g0018).

Samplehapid

Sample haplotype IDs to include (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

No_hapid

Haplotype IDs to exclude (comma-separated; e.g., a0001, a0002, a0001c0001, a0001c0001t0005, a1, a01).

No_samplehapid

Sample haplotype IDs to exclude (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

Start

Start position (GRCh38).

End

End position (GRCh38).

Minac

Minimum alternate allele count (≥).

Maxac

Maximum alternate allele count (≤).

Minlen

Minimum variant length (≥).

Maxlen

Maximum variant length (≤).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	pos	ref	alt	annotation	impact	samples	ahapids	achapids	acthapids	actghapids	ac	an	af	len	hgvs_c	hgvs_p	genename	geneid	featuretype	featureid	transcript_biotype	rank	cdna cdna pos length	cds cds pos length	aa aa pos length	distance	status	chr	external
CLOCK_chr4_55422903_55551909	55440978	AAACAAAA others(3): Show AAACAAAACAC	A A	intron_variant intron_variant	MODIFIER	HG01261.hp2 HG03942.hp1 HG01261.hp2 HG03942.hp1	a0003 a0003	a0003c0007 a0003c0007	a0003c0007t0040 a0003c0007t0040	a0003c0007t0040g0179 a0003c0007t0040g0180 a0003c0007t0040g0179 a0003c0007t0040g0180	2	338	0.0059	-10	c.210 others(29): Show c.2105+1444_2105+1453delGTGTTTTGTT		CLOCK	ENSG00000134852.15	transcript	ENST00000513440.6	protein_coding	21/22						chr4	TogoVar
CLOCK_chr4_55422903_55551909	55448593	CACGCGCG others(3): Show CACGCGCGCGT	C C	intron_variant intron_variant	MODIFIER	HG02055.hp2 HG02630.hp2 HG03130.hp2 others(1): Show HG02055.hp2 HG02630.hp2 HG03130.hp2 HG03195.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0011 a0001c0001t0053 a0001c0001t0011 a0001c0001t0053	a0001c0001t0011g0317 a0001c0001t0011g0320 a0001c0001t0011g0321 others(1): Show a0001c0001t0011g0317 a0001c0001t0011g0320 a0001c0001t0011g0321 a0001c0001t0053g0316	4	338	0.0118	-10	c.153 others(27): Show c.1539+176_1539+185delACGCGCGCGT		CLOCK	ENSG00000134852.15	transcript	ENST00000513440.6	protein_coding	18/22						chr4	TogoVar
CLOCK_chr4_55422903_55551909	55448597	CGCGCGTG others(3): Show CGCGCGTGTGT	C C	intron_variant intron_variant	MODIFIER	HG01175.hp1 HG01255.hp2 HG01256.hp2 others(15): Show HG01175.hp1 HG01255.hp2 HG01256.hp2 HG01258.hp2 HG01346.hp1 HG01978.hp2 HG01981.hp2 HG02015.hp1 HG02109.hp1 HG02135.hp1 HG02293.hp2 HG02486.hp1 HG02523.hp2 HG03130.hp1 HG03453.hp2 HG03927.hp1 NA18522.hp1 NA20300.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0007 a0001c0001t0008 others(4): Show a0001c0001t0001 a0001c0001t0007 a0001c0001t0008 a0001c0001t0010 a0001c0001t0013 a0001c0001t0021 a0001c0001t0080	a0001c0001t0001g0094 a0001c0001t0001g0096 a0001c0001t0001g0097 others(15): Show a0001c0001t0001g0094 a0001c0001t0001g0096 a0001c0001t0001g0097 a0001c0001t0001g0100 a0001c0001t0001g0105 a0001c0001t0001g0106 a0001c0001t0001g0109 a0001c0001t0001g0141 a0001c0001t0001g0151 a0001c0001t0007g0074 a0001c0001t0007g0119 a0001c0001t0008g0092 a0001c0001t0010g0093 a0001c0001t0010g0115 a0001c0001t0010g0174 a0001c0001t0013g0127 a0001c0001t0021g0110 a0001c0001t0080g0079	18	338	0.0533	-10	c.153 others(27): Show c.1539+172_1539+181delACACACGCGC		CLOCK	ENSG00000134852.15	transcript	ENST00000513440.6	protein_coding	18/22						chr4	TogoVar
CLOCK_chr4_55422903_55551909	55448599	CGCGTGTG others(3): Show CGCGTGTGTGT	C C	intron_variant intron_variant	MODIFIER	HG01081.hp2 HG01891.hp2 HG02602.hp1 others(5): Show HG01081.hp2 HG01891.hp2 HG02602.hp1 HG02717.hp1 HG02809.hp1 HG04184.hp1 NA18983.hp1 NA19090.hp2	a0001 a0006 a0001 a0006	a0001c0001 a0001c0004 a0006c0013 a0001c0001 a0001c0004 a0006c0013	a0001c0001t0001 a0001c0001t0014 a0001c0001t0021 others(4): Show a0001c0001t0001 a0001c0001t0014 a0001c0001t0021 a0001c0001t0036 a0001c0001t0075 a0001c0004t0004 a0006c0013t0078	a0001c0001t0001g0153 a0001c0001t0001g0162 a0001c0001t0014g0091 others(5): Show a0001c0001t0001g0153 a0001c0001t0001g0162 a0001c0001t0014g0091 a0001c0001t0021g0121 a0001c0001t0036g0279 a0001c0001t0075g0148 a0001c0004t0004g0303 a0006c0013t0078g0152	8	338	0.0237	-10	c.153 others(27): Show c.1539+170_1539+179delACACACACGC		CLOCK	ENSG00000134852.15	transcript	ENST00000513440.6	protein_coding	18/22						chr4	TogoVar
CLOCK_chr4_55422903_55551909	55448601	CGTGTGTG others(3): Show CGTGTGTGTGT	C C	intron_variant intron_variant	MODIFIER	HG00544.hp2 HG00621.hp2 HG01243.hp1 others(20): Show HG00544.hp2 HG00621.hp2 HG01243.hp1 HG02145.hp2 HG02257.hp1 HG02258.hp1 HG02572.hp2 HG02818.hp1 HG02818.hp2 HG02970.hp1 HG02970.hp2 HG02976.hp2 HG03209.hp1 HG03225.hp1 HG03471.hp1 HG03516.hp1 HG03540.hp1 HG03579.hp1 NA18906.hp1 NA18999.hp2 NA19043.hp1 NA20300.hp1 NA21309.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0002c0003 a0002c0008 a0001c0001 a0002c0003 a0002c0008	a0001c0001t0001 a0002c0003t0005 a0002c0003t0020 others(6): Show a0001c0001t0001 a0002c0003t0005 a0002c0003t0020 a0002c0003t0029 a0002c0003t0061 a0002c0003t0062 a0002c0003t0066 a0002c0003t0073 a0002c0008t0024	a0001c0001t0001g0129 a0001c0001t0001g0144 a0001c0001t0001g0170 others(20): Show a0001c0001t0001g0129 a0001c0001t0001g0144 a0001c0001t0001g0170 a0002c0003t0005g0188 a0002c0003t0005g0324 a0002c0003t0005g0327 a0002c0003t0005g0328 a0002c0003t0005g0329 a0002c0003t0005g0330 a0002c0003t0005g0331 a0002c0003t0005g0332 a0002c0003t0005g0333 a0002c0003t0005g0335 a0002c0003t0005g0336 a0002c0003t0020g0181 a0002c0003t0020g0184 a0002c0003t0020g0337 a0002c0003t0029g0185 a0002c0003t0061g0323 a0002c0003t0062g0325 a0002c0003t0066g0295 a0002c0003t0073g0182 a0002c0008t0024g0322	23	338	0.0681	-10	c.153 others(27): Show c.1539+168_1539+177delACACACACAC		CLOCK	ENSG00000134852.15	transcript	ENST00000513440.6	protein_coding	18/22						chr4	TogoVar
CLOCK_chr4_55422903_55551909	55503978	TAAAAAAA others(3): Show TAAAAAAAAAA	T T	intron_variant intron_variant	MODIFIER	HG01884.hp2 HG02630.hp1 NA19240.hp2 HG01884.hp2 HG02630.hp1 NA19240.hp2	a0002 a0002	a0002c0003 a0002c0003	a0002c0003t0028 a0002c0003t0028	a0002c0003t0028g0292 a0002c0003t0028g0293 a0002c0003t0028g0294 a0002c0003t0028g0292 a0002c0003t0028g0293 a0002c0003t0028g0294	3	338	0.0089	-10	c.-13 others(29): Show c.-136+5924_-136+5933delTTTTTTTTTT		CLOCK	ENSG00000134852.15	transcript	ENST00000513440.6	protein_coding	2/22						chr4	TogoVar
CLOCK_chr4_55422903_55551909	55510629	TAAAAAAA others(3): Show TAAAAAAAAAA	T T	intron_variant intron_variant	MODIFIER	HG02647.hp2 HG02886.hp1 HG03486.hp1 HG02647.hp2 HG02886.hp1 HG03486.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0027 a0001c0002t0027	a0001c0002t0027g0296 a0001c0002t0027g0312 a0001c0002t0027g0313 a0001c0002t0027g0296 a0001c0002t0027g0312 a0001c0002t0027g0313	3	338	0.0089	-10	c.-28 others(27): Show c.-289-574_-289-565delTTTTTTTTTT		CLOCK	ENSG00000134852.15	transcript	ENST00000513440.6	protein_coding	1/22						chr4	TogoVar
CLPB_chr11_72280495_72439531	72297636	GGTGTGTG others(3): Show GGTGTGTGTGT	G G	intron_variant intron_variant	MODIFIER	HG00438.hp2 HG02135.hp1 HG02451.hp1 others(3): Show HG00438.hp2 HG02135.hp1 HG02451.hp1 HG02970.hp1 HG03041.hp2 NA19011.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0002c0008 a0001c0001 a0002c0008	a0001c0001t0026 a0001c0001t0029 a0001c0001t0057 others(3): Show a0001c0001t0026 a0001c0001t0029 a0001c0001t0057 a0001c0001t0117 a0001c0001t0128 a0002c0008t0002	a0001c0001t0026g0037 a0001c0001t0029g0054 a0001c0001t0057g0077 others(3): Show a0001c0001t0026g0037 a0001c0001t0029g0054 a0001c0001t0057g0077 a0001c0001t0117g0118 a0001c0001t0128g0040 a0002c0008t0002g0141	6	206	0.0291	-10	c.142 others(29): Show c.1420-1998_1420-1989delACACACACAC		CLPB	ENSG00000162129.15	transcript	ENST00000294053.9	protein_coding	12/16						chr11	TogoVar
CLPB_chr11_72280495_72439531	72371533	AAAAATAA others(3): Show AAAAATAAAAT	A A	intron_variant intron_variant	MODIFIER	HG02056.hp1 HG02132.hp1 HG02280.hp2 others(10): Show HG02056.hp1 HG02132.hp1 HG02280.hp2 HG02486.hp1 HG02622.hp1 HG02886.hp2 HG03098.hp1 HG03225.hp1 HG03540.hp1 NA18979.hp1 NA18981.hp2 NA19062.hp2 homoSapiens_chm13v2.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0007 a0001c0001t0008 a0001c0001t0025 others(8): Show a0001c0001t0007 a0001c0001t0008 a0001c0001t0025 a0001c0001t0039 a0001c0001t0041 a0001c0001t0045 a0001c0001t0069 a0001c0001t0070 a0001c0001t0072 a0001c0001t0091 a0001c0001t0126	a0001c0001t0007g0033 a0001c0001t0007g0034 a0001c0001t0007g0035 others(10): Show a0001c0001t0007g0033 a0001c0001t0007g0034 a0001c0001t0007g0035 a0001c0001t0008g0081 a0001c0001t0025g0046 a0001c0001t0039g0155 a0001c0001t0041g0154 a0001c0001t0045g0205 a0001c0001t0069g0005 a0001c0001t0070g0004 a0001c0001t0072g0184 a0001c0001t0091g0009 a0001c0001t0126g0185	13	206	0.0631	-10	c.736 others(27): Show c.736+1382_736+1391delATTTTATTTT		CLPB	ENSG00000162129.15	transcript	ENST00000294053.9	protein_coding	5/16						chr11	TogoVar
CLPB_chr11_72280495_72439531	72416735	CAAAAAAA others(3): Show CAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG03130.hp2 NA18946.hp1 NA18952.hp1 others(9): Show HG03130.hp2 NA18946.hp1 NA18952.hp1 NA18967.hp1 NA18970.hp2 NA18979.hp1 NA18981.hp1 NA18982.hp2 NA19003.hp1 NA19005.hp1 NA19062.hp2 NA19074.hp2	a0001 a0003 a0001 a0003	a0001c0001 a0001c0004 a0003c0005 a0001c0001 a0001c0004 a0003c0005	a0001c0001t0012 a0001c0001t0013 a0001c0001t0072 others(5): Show a0001c0001t0012 a0001c0001t0013 a0001c0001t0072 a0001c0001t0122 a0001c0001t0123 a0001c0001t0126 a0001c0004t0012 a0003c0005t0124	a0001c0001t0012g0186 a0001c0001t0012g0190 a0001c0001t0013g0182 others(8): Show a0001c0001t0012g0186 a0001c0001t0012g0190 a0001c0001t0013g0182 a0001c0001t0013g0188 a0001c0001t0013g0189 a0001c0001t0072g0184 a0001c0001t0122g0187 a0001c0001t0123g0183 a0001c0001t0126g0185 a0001c0004t0012g0001 a0003c0005t0124g0002	12	206	0.0583	-10	c.455 others(29): Show c.455+13567_455+13576delTTTTTTTTTT		CLPB	ENSG00000162129.15	transcript	ENST00000294053.9	protein_coding	2/16						chr11	TogoVar
CLPB_chr11_72280495_72439531	72422223	GCCACTGC others(3): Show GCCACTGCACT	G G	intron_variant intron_variant	MODIFIER	HG01261.hp2 HG01361.hp1 HG01934.hp2 others(1): Show HG01261.hp2 HG01361.hp1 HG01934.hp2 HG02148.hp2	a0001 a0001	a0001c0001 a0001c0009 a0001c0001 a0001c0009	a0001c0001t0015 a0001c0009t0071 a0001c0001t0015 a0001c0009t0071	a0001c0001t0015g0168 a0001c0001t0015g0169 a0001c0001t0015g0170 others(1): Show a0001c0001t0015g0168 a0001c0001t0015g0169 a0001c0001t0015g0170 a0001c0009t0071g0167	4	206	0.0194	-10	c.455 others(27): Show c.455+8079_455+8088delAGTGCAGTGG		CLPB	ENSG00000162129.15	transcript	ENST00000294053.9	protein_coding	2/16						chr11	TogoVar
CLPSL2_chr6_35771598_35784552	35772741	TATATATA others(3): Show TATATATATGC	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02486.hp2 HG02486.hp2	a0004 a0004	a0004c0004 a0004c0004	a0004c0004t0001 a0004c0004t0001	a0004c0004t0001g0015 a0004c0004t0001g0015	1	460	0.0022	-10	c.-38 others(21): Show c.-3877_-3868delATATATATGC		CLPSL2	ENSG00000196748.10	transcript	ENST00000403376.4	protein_coding					3856		chr6	TogoVar
CLPSL2_chr6_35771598_35784552	35775015	CAAAAAAA others(3): Show CAAAAAAAAAA	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02622.hp2 HG02809.hp1 HG02896.hp1 HG02622.hp2 HG02809.hp1 HG02896.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0005 a0001c0001t0001g0005	3	460	0.0065	-10	c.-16 others(21): Show c.-1603_-1594delAAAAAAAAAA		CLPSL2	ENSG00000196748.10	transcript	ENST00000403376.4	protein_coding					1582		chr6	TogoVar
CLPS_chr6_35789982_35802323	35794660	AGTGTGTG others(3): Show AGTGTGTGTGT	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	HG06807.hp1 NA19030.hp1 HG06807.hp1 NA19030.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0001 a0001c0001t0002	a0001c0001t0001g0004 a0001c0001t0002g0050 a0001c0001t0001g0004 a0001c0001t0002g0050	2	418	0.0048	-10	c.47 others(19): Show c.476_*485delACACACACAC		CLPS	ENSG00000137392.10	transcript	ENST00000259938.7	protein_coding					321		chr6	TogoVar
CLPS_chr6_35789982_35802323	35794685	GTGTGTGT others(3): Show GTGTGTGTGTA	G G	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00639.hp1 HG01069.hp1 HG01884.hp2 others(13): Show HG00639.hp1 HG01069.hp1 HG01884.hp2 HG02132.hp1 HG02922.hp1 HG03239.hp1 HG03490.hp2 HG03688.hp2 HG03831.hp1 HG06807.hp2 NA18906.hp1 NA18947.hp1 NA18975.hp2 NA18981.hp2 NA18986.hp1 NA19007.hp1	a0001 a0004 a0001 a0004	a0001c0001 a0004c0006 a0001c0001 a0004c0006	a0001c0001t0001 a0001c0001t0002 a0004c0006t0001 a0001c0001t0001 a0001c0001t0002 a0004c0006t0001	a0001c0001t0001g0001 a0001c0001t0001g0008 a0001c0001t0002g0003 others(2): Show a0001c0001t0001g0001 a0001c0001t0001g0008 a0001c0001t0002g0003 a0001c0001t0002g0017 a0004c0006t0001g0023	16	418	0.0383	-10	c.45 others(19): Show c.451_*460delTACACACACA		CLPS	ENSG00000137392.10	transcript	ENST00000259938.7	protein_coding					296		chr6	TogoVar
CLPS_chr6_35789982_35802323	35797482	CGTGTGTG others(3): Show CGTGTGTGTGT	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01884.hp2 HG02723.hp1 HG01884.hp2 HG02723.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0008 a0001c0001t0001g0041 a0001c0001t0001g0008 a0001c0001t0001g0041	2	418	0.0048	-10	c.-20 others(19): Show c.-204_-195delACACACACAC		CLPS	ENSG00000137392.10	transcript	ENST00000259938.7	protein_coding					160		chr6	TogoVar
CLRN1_chr3_150921567_150977727	150935128	GTTTTTTT others(3): Show GTTTTTTTATT	G G	intron_variant intron_variant	MODIFIER	HG00323.hp2 HG00408.hp1 HG00423.hp2 others(135): Show HG00323.hp2 HG00408.hp1 HG00423.hp2 HG00438.hp1 HG00438.hp2 HG00544.hp1 HG00544.hp2 HG00558.hp1 HG00597.hp2 HG00621.hp1 HG00735.hp1 HG00735.hp2 HG00738.hp2 HG01069.hp2 HG01070.hp1 HG01070.hp2 HG01071.hp2 HG01099.hp2 HG01123.hp2 HG01167.hp2 HG01192.hp1 HG01258.hp2 HG01346.hp1 HG01515.hp1 HG01515.hp2 HG01516.hp1 HG01517.hp1 HG01517.hp2 HG01884.hp2 HG01891.hp1 HG01934.hp1 HG01952.hp1 HG01978.hp1 HG01978.hp2 HG01993.hp2 HG02004.hp2 HG02015.hp2 HG02040.hp1 HG02056.hp1 HG02071.hp1 HG02080.hp1 HG02080.hp2 HG02083.hp2 HG02129.hp1 HG02132.hp1 HG02148.hp2 HG02165.hp2 HG02258.hp1 HG02273.hp1 HG02300.hp1 HG02602.hp2 HG02615.hp1 HG02615.hp2 HG02683.hp1 HG02698.hp1 HG02723.hp2 HG02965.hp1 HG03017.hp1 HG03139.hp1 HG03453.hp2 HG03490.hp1 HG03492.hp1 HG03516.hp1 HG03579.hp1 HG03669.hp1 HG03669.hp2 HG03688.hp1 HG03688.hp2 HG03831.hp1 HG03834.hp2 HG03927.hp2 HG03942.hp2 HG04115.hp1 HG04184.hp1 HG04184.hp2 HG04199.hp2 HG04204.hp2 HG06807.hp2 NA18612.hp1 NA18612.hp2 NA18747.hp1 NA18939.hp1 NA18940.hp2 NA18941.hp1 NA18943.hp1 NA18944.hp1 NA18948.hp2 NA18950.hp1 NA18951.hp1 NA18952.hp2 NA18960.hp1 NA18961.hp2 NA18963.hp1 NA18965.hp1 NA18965.hp2 NA18970.hp1 NA18970.hp2 NA18974.hp2 NA18977.hp1 NA18978.hp1 NA18980.hp2 NA18981.hp1 NA18983.hp1 NA18983.hp2 NA18985.hp1 NA18986.hp2 NA18987.hp1 NA18993.hp2 NA18997.hp1 NA18997.hp2 NA19001.hp2 NA19005.hp2 NA19006.hp2 NA19009.hp1 NA19009.hp2 NA19010.hp2 NA19012.hp1 NA19030.hp1 NA19055.hp1 NA19057.hp1 NA19057.hp2 NA19058.hp1 NA19063.hp1 NA19064.hp1 NA19065.hp2 NA19067.hp1 NA19068.hp1 NA19074.hp1 NA19076.hp1 NA19076.hp2 NA19079.hp2 NA19085.hp2 NA19090.hp2 NA19091.hp1 NA20300.hp2 NA20752.hp2 NA20905.hp2 NA21309.hp1	a0001 a0002 a0005 others(1): Show a0001 a0002 a0005 a0006	a0001c0001 a0001c0002 a0001c0003 others(3): Show a0001c0001 a0001c0002 a0001c0003 a0002c0004 a0005c0006 a0006c0008	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(21): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0005 a0001c0001t0006 a0001c0001t0009 a0001c0001t0010 a0001c0001t0015 a0001c0001t0016 a0001c0001t0017 a0001c0001t0020 a0001c0001t0021 a0001c0001t0022 a0001c0002t0001 a0001c0002t0002 a0001c0002t0003 a0001c0002t0006 a0001c0002t0018 a0001c0003t0001 a0001c0003t0002 a0002c0004t0003 a0005c0006t0007 a0006c0008t0005	a0001c0001t0001g0014 a0001c0001t0001g0016 a0001c0001t0001g0025 others(130): Show a0001c0001t0001g0014 a0001c0001t0001g0016 a0001c0001t0001g0025 a0001c0001t0001g0028 a0001c0001t0001g0084 a0001c0001t0001g0100 a0001c0001t0001g0110 a0001c0001t0001g0155 a0001c0001t0001g0157 a0001c0001t0001g0159 a0001c0001t0001g0161 a0001c0001t0001g0166 a0001c0001t0001g0184 a0001c0001t0001g0220 a0001c0001t0001g0242 a0001c0001t0001g0246 a0001c0001t0001g0259 a0001c0001t0001g0274 a0001c0001t0001g0277 a0001c0001t0001g0278 a0001c0001t0001g0280 a0001c0001t0001g0281 a0001c0001t0001g0283 a0001c0001t0001g0289 a0001c0001t0001g0299 a0001c0001t0001g0301 a0001c0001t0001g0302 a0001c0001t0001g0306 a0001c0001t0002g0006 a0001c0001t0002g0011 a0001c0001t0002g0024 a0001c0001t0002g0031 a0001c0001t0002g0041 a0001c0001t0002g0051 a0001c0001t0002g0052 a0001c0001t0002g0057 a0001c0001t0002g0062 a0001c0001t0002g0071 a0001c0001t0002g0072 a0001c0001t0002g0074 a0001c0001t0002g0090 a0001c0001t0002g0096 a0001c0001t0002g0112 a0001c0001t0002g0113 a0001c0001t0002g0118 a0001c0001t0002g0119 a0001c0001t0002g0153 a0001c0001t0002g0172 a0001c0001t0002g0179 a0001c0001t0002g0182 a0001c0001t0002g0183 a0001c0001t0002g0188 a0001c0001t0002g0192 a0001c0001t0002g0193 a0001c0001t0002g0194 a0001c0001t0002g0199 a0001c0001t0002g0210 a0001c0001t0002g0213 a0001c0001t0002g0215 a0001c0001t0002g0230 a0001c0001t0002g0236 a0001c0001t0002g0237 a0001c0001t0002g0243 a0001c0001t0002g0244 a0001c0001t0002g0245 a0001c0001t0002g0264 a0001c0001t0002g0271 a0001c0001t0002g0275 a0001c0001t0002g0293 a0001c0001t0002g0298 a0001c0001t0002g0300 a0001c0001t0003g0032 a0001c0001t0003g0038 a0001c0001t0003g0039 a0001c0001t0003g0067 a0001c0001t0003g0076 a0001c0001t0003g0077 a0001c0001t0003g0086 a0001c0001t0003g0092 a0001c0001t0003g0154 a0001c0001t0003g0164 a0001c0001t0003g0167 a0001c0001t0003g0169 a0001c0001t0003g0177 a0001c0001t0003g0190 a0001c0001t0003g0191 a0001c0001t0003g0224 a0001c0001t0003g0238 a0001c0001t0003g0241 a0001c0001t0003g0284 a0001c0001t0004g0149 a0001c0001t0004g0186 a0001c0001t0005g0178 a0001c0001t0005g0267 a0001c0001t0005g0268 a0001c0001t0006g0053 a0001c0001t0006g0088 a0001c0001t0006g0098 a0001c0001t0006g0127 a0001c0001t0006g0265 a0001c0001t0006g0279 a0001c0001t0009g0151 a0001c0001t0010g0059 a0001c0001t0010g0091 a0001c0001t0015g0135 a0001c0001t0016g0139 a0001c0001t0017g0150 a0001c0001t0020g0073 a0001c0001t0021g0035 a0001c0001t0022g0034 a0001c0002t0001g0326 a0001c0002t0001g0346 a0001c0002t0001g0347 a0001c0002t0001g0361 a0001c0002t0002g0317 a0001c0002t0002g0333 a0001c0002t0002g0339 a0001c0002t0002g0352 a0001c0002t0003g0019 a0001c0002t0003g0323 a0001c0002t0003g0336 a0001c0002t0003g0359 a0001c0002t0003g0362 a0001c0002t0003g0371 a0001c0002t0006g0315 a0001c0002t0018g0353 a0001c0003t0001g0377 a0001c0003t0001g0378 a0001c0003t0002g0375 a0002c0004t0003g0022 a0002c0004t0003g0023 a0005c0006t0007g0130 a0006c0008t0005g0310	138	408	0.3382	-10	c.433 others(27): Show c.433+6444_433+6453delAATAAAAAAA		CLRN1	ENSG00000163646.12	transcript	ENST00000327047.6	protein_coding	2/2						chr3	TogoVar
CLRN1_chr3_150921567_150977727	150957238	TACACACA others(3): Show TACACACACAC	T T	intron_variant intron_variant	MODIFIER	HG01496.hp2 NA18906.hp2 HG01496.hp2 NA18906.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0007 a0001c0002t0001 a0001c0002t0007	a0001c0002t0001g0313 a0001c0002t0007g0314 a0001c0002t0001g0313 a0001c0002t0007g0314	2	408	0.0049	-10	c.253 others(29): Show c.253+15208_253+15217delGTGTGTGTGT		CLRN1	ENSG00000163646.12	transcript	ENST00000327047.6	protein_coding	1/2						chr3	TogoVar
CLRN2_chr4_17510165_17532104	17524204	ATGTGTGT others(3): Show ATGTGTGTGTG	A A	intron_variant intron_variant	MODIFIER	HG00099.hp2 HG00323.hp1 HG00558.hp2 others(37): Show HG00099.hp2 HG00323.hp1 HG00558.hp2 HG01069.hp1 HG01074.hp2 HG01081.hp1 HG01106.hp2 HG01109.hp1 HG01256.hp2 HG01258.hp2 HG01261.hp1 HG01346.hp1 HG01515.hp1 HG01516.hp1 HG01516.hp2 HG01517.hp2 HG01884.hp1 HG01981.hp2 HG02109.hp2 HG02258.hp1 HG02300.hp1 HG02559.hp2 HG02698.hp2 HG02723.hp2 HG02738.hp2 HG02886.hp2 HG02922.hp2 HG03491.hp2 HG03540.hp2 HG03688.hp1 HG04115.hp1 NA18944.hp1 NA18963.hp1 NA18998.hp1 NA19003.hp1 NA19082.hp2 NA19088.hp1 NA19091.hp1 NA20752.hp2 NA21309.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0003 a0001c0001t0001g0022 a0001c0001t0001g0026 others(5): Show a0001c0001t0001g0003 a0001c0001t0001g0022 a0001c0001t0001g0026 a0001c0001t0001g0044 a0001c0001t0001g0113 a0001c0001t0001g0115 a0001c0001t0001g0116 a0001c0001t0001g0124	40	442	0.0905	-10	c.433 others(27): Show c.433+1184_433+1193delTGTGTGTGTG		CLRN2	ENSG00000249581.2	transcript	ENST00000511148.2	protein_coding	2/2					INFO_REALIGN_3_PRIME	chr4	TogoVar
CLSPN_chr1_35727112_35774978	35728921	AACACACA others(3): Show AACACACACAC	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01169.hp1 HG01175.hp2 HG02040.hp2 others(7): Show HG01169.hp1 HG01175.hp2 HG02040.hp2 HG02273.hp2 HG02970.hp2 HG03139.hp1 HG03516.hp1 HG04204.hp2 NA18906.hp1 NA18972.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0002 a0002c0002t0005 a0002c0002t0008 a0002c0002t0002 a0002c0002t0005 a0002c0002t0008	a0002c0002t0002g0001 a0002c0002t0002g0020 a0002c0002t0002g0134 others(7): Show a0002c0002t0002g0001 a0002c0002t0002g0020 a0002c0002t0002g0134 a0002c0002t0002g0138 a0002c0002t0002g0160 a0002c0002t0005g0135 a0002c0002t0005g0137 a0002c0002t0005g0155 a0002c0002t0008g0022 a0002c0002t0008g0187	10	296	0.0338	-10	c.75 others(21): Show c.7565_*7574delGTGTGTGTGT		CLSPN	ENSG00000092853.14	transcript	ENST00000318121.8	protein_coding					3190		chr1	TogoVar
CLSPN_chr1_35727112_35774978	35748820	CTTTTTTT others(3): Show CTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG00741.hp1 HG00741.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0012 a0001c0001t0012	a0001c0001t0012g0067 a0001c0001t0012g0067	1	296	0.0034	-10	c.227 others(27): Show c.2273-226_2273-217delAAAAAAAAAA		CLSPN	ENSG00000092853.14	transcript	ENST00000318121.8	protein_coding	12/24						chr1	TogoVar
CLSPN_chr1_35727112_35774978	35770420	AATATATA others(3): Show AATATATATAT	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03453.hp1 HG03453.hp1	a0013 a0013	a0013c0014 a0013c0014	a0013c0014t0023 a0013c0014t0023	a0013c0014t0023g0233 a0013c0014t0023g0233	1	296	0.0034	-10	c.-56 others(19): Show c.-560_-551delATATATATAT		CLSPN	ENSG00000092853.14	transcript	ENST00000318121.8	protein_coding					443		chr1	TogoVar
CLSTN1_chr1_9723926_9828965	9769048	GGAGGGAG others(3): Show GGAGGGAGGGA	G G	intron_variant intron_variant	MODIFIER	HG00558.hp1 HG01981.hp2 NA18940.hp2 others(5): Show HG00558.hp1 HG01981.hp2 NA18940.hp2 NA18968.hp2 NA18983.hp2 NA18990.hp1 NA18995.hp2 NA19082.hp2	a0003 a0003	a0003c0004 a0003c0004	a0003c0004t0002 a0003c0004t0002	a0003c0004t0002g0063 a0003c0004t0002g0064 a0003c0004t0002g0065 others(5): Show a0003c0004t0002g0063 a0003c0004t0002g0064 a0003c0004t0002g0065 a0003c0004t0002g0066 a0003c0004t0002g0067 a0003c0004t0002g0068 a0003c0004t0002g0069 a0003c0004t0002g0070	8	270	0.0296	-10	c.214 others(27): Show c.214+4214_214+4223delTCCCTCCCTC		CLSTN1	ENSG00000171603.18	transcript	ENST00000377298.9	protein_coding	2/18						chr1	TogoVar
CLSTN1_chr1_9723926_9828965	9778223	AACACACA others(3): Show AACACACACAC	A A	intron_variant intron_variant	MODIFIER	HG00639.hp1 HG03486.hp1 HG00639.hp1 HG03486.hp1	a0001 a0001	a0001c0001 a0001c0003 a0001c0001 a0001c0003	a0001c0001t0001 a0001c0003t0004 a0001c0001t0001 a0001c0003t0004	a0001c0001t0001g0262 a0001c0003t0004g0110 a0001c0001t0001g0262 a0001c0003t0004g0110	2	270	0.0074	-10	c.92- others(25): Show c.92-4839_92-4830delGTGTGTGTGT		CLSTN1	ENSG00000171603.18	transcript	ENST00000377298.9	protein_coding	1/18						chr1	TogoVar
CLSTN2_chr3_139930185_140582397	139955112	CTATATAT others(3): Show CTATATATATA	C C	intron_variant intron_variant	MODIFIER	HG01169.hp1 HG01169.hp1	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0007 a0001c0003t0007	a0001c0003t0007g0068 a0001c0003t0007g0068	1	110	0.0091	-10	c.109 others(29): Show c.109+19647_109+19656delATATATATAT		CLSTN2	ENSG00000158258.16	transcript	ENST00000458420.7	protein_coding	1/16					INFO_REALIGN_3_PRIME	chr3	TogoVar
CLSTN2_chr3_139930185_140582397	139978648	TTGTGTGT others(3): Show TTGTGTGTGTG	T T	intron_variant intron_variant	MODIFIER	HG00735.hp2 HG01081.hp2 HG01169.hp1 others(12): Show HG00735.hp2 HG01081.hp2 HG01169.hp1 HG02145.hp1 HG02886.hp2 HG03225.hp2 HG03492.hp1 HG03492.hp2 HG03704.hp1 HG04199.hp1 NA19066.hp1 NA19079.hp1 NA19087.hp2 NA20300.hp2 NA21309.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0001c0003 a0001c0006 others(3): Show a0001c0001 a0001c0003 a0001c0006 a0002c0002 a0002c0004 a0002c0007	a0001c0001t0001 a0001c0001t0014 a0001c0003t0003 others(7): Show a0001c0001t0001 a0001c0001t0014 a0001c0003t0003 a0001c0003t0007 a0001c0006t0031 a0002c0002t0001 a0002c0002t0002 a0002c0004t0007 a0002c0004t0037 a0002c0007t0003	a0001c0001t0001g0037 a0001c0001t0001g0069 a0001c0001t0014g0001 others(12): Show a0001c0001t0001g0037 a0001c0001t0001g0069 a0001c0001t0014g0001 a0001c0003t0003g0071 a0001c0003t0003g0075 a0001c0003t0003g0080 a0001c0003t0007g0068 a0001c0006t0031g0024 a0002c0002t0001g0066 a0002c0002t0001g0074 a0002c0002t0002g0086 a0002c0004t0007g0067 a0002c0004t0007g0085 a0002c0004t0037g0073 a0002c0007t0003g0083	15	110	0.1364	-10	c.109 others(29): Show c.109+43211_109+43220delGTGTGTGTGT		CLSTN2	ENSG00000158258.16	transcript	ENST00000458420.7	protein_coding	1/16					INFO_REALIGN_3_PRIME	chr3	TogoVar
CLSTN2_chr3_139930185_140582397	140236855	GTGTGTGT others(3): Show GTGTGTGTGTA	G G	intron_variant intron_variant	MODIFIER	HG02615.hp2 HG02886.hp1 HG03139.hp1 HG02615.hp2 HG02886.hp1 HG03139.hp1	a0001 a0004 a0001 a0004	a0001c0001 a0004c0013 a0001c0001 a0004c0013	a0001c0001t0001 a0001c0001t0041 a0004c0013t0008 a0001c0001t0001 a0001c0001t0041 a0004c0013t0008	a0001c0001t0001g0048 a0001c0001t0041g0047 a0004c0013t0008g0099 a0001c0001t0001g0048 a0001c0001t0041g0047 a0004c0013t0008g0099	3	110	0.0273	-10	c.232 others(29): Show c.232+60784_232+60793delGTGTGTGTAT		CLSTN2	ENSG00000158258.16	transcript	ENST00000458420.7	protein_coding	2/16					INFO_REALIGN_3_PRIME	chr3	TogoVar
CLSTN2_chr3_139930185_140582397	140240142	CTCTCTCT others(3): Show CTCTCTCTCTG	C C	intron_variant intron_variant	MODIFIER	HG02559.hp2 HG03041.hp2 HG03688.hp2 others(1): Show HG02559.hp2 HG03041.hp2 HG03688.hp2 NA19043.hp2	a0001 a0002 a0006 a0001 a0002 a0006	a0001c0001 a0001c0018 a0002c0010 others(1): Show a0001c0001 a0001c0018 a0002c0010 a0006c0020	a0001c0001t0006 a0001c0018t0002 a0002c0010t0023 others(1): Show a0001c0001t0006 a0001c0018t0002 a0002c0010t0023 a0006c0020t0034	a0001c0001t0006g0055 a0001c0018t0002g0006 a0002c0010t0023g0081 others(1): Show a0001c0001t0006g0055 a0001c0018t0002g0006 a0002c0010t0023g0081 a0006c0020t0034g0102	4	110	0.0364	-10	c.232 others(29): Show c.232+64079_232+64088delGTCTCTCTCT		CLSTN2	ENSG00000158258.16	transcript	ENST00000458420.7	protein_coding	2/16					INFO_REALIGN_3_PRIME	chr3	TogoVar
CLSTN2_chr3_139930185_140582397	140240168	CTCTCTCT others(3): Show CTCTCTCTATA	C C	intron_variant intron_variant	MODIFIER	HG02809.hp1 HG03139.hp1 HG03139.hp2 others(1): Show HG02809.hp1 HG03139.hp1 HG03139.hp2 HG03225.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0005 a0001c0001t0001 a0001c0001t0002 a0001c0001t0005	a0001c0001t0001g0048 a0001c0001t0002g0105 a0001c0001t0005g0026 others(1): Show a0001c0001t0001g0048 a0001c0001t0002g0105 a0001c0001t0005g0026 a0001c0001t0005g0035	4	110	0.0364	-10	c.232 others(29): Show c.232+64097_232+64106delCTCTCTATAT		CLSTN2	ENSG00000158258.16	transcript	ENST00000458420.7	protein_coding	2/16					INFO_REALIGN_3_PRIME	chr3	TogoVar
CLSTN2_chr3_139930185_140582397	140240170	CTCTCTAT others(3): Show CTCTCTATATA	C C	intron_variant intron_variant	MODIFIER	HG02615.hp2 HG02615.hp2	a0004 a0004	a0004c0013 a0004c0013	a0004c0013t0008 a0004c0013t0008	a0004c0013t0008g0099 a0004c0013t0008g0099	1	110	0.0091	-10	c.232 others(29): Show c.232+64099_232+64108delCTCTATATAT		CLSTN2	ENSG00000158258.16	transcript	ENST00000458420.7	protein_coding	2/16					INFO_REALIGN_3_PRIME	chr3	TogoVar
CLSTN2_chr3_139930185_140582397	140240217	CACACATA others(3): Show CACACATATAT	C C	intron_variant intron_variant	MODIFIER	HG02723.hp2 HG02723.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0001	a0002c0002t0001g0022 a0002c0002t0001g0022	1	110	0.0091	-10	c.232 others(29): Show c.232+64146_232+64155delCACATATATA		CLSTN2	ENSG00000158258.16	transcript	ENST00000458420.7	protein_coding	2/16					INFO_REALIGN_3_PRIME	chr3	TogoVar
CLSTN2_chr3_139930185_140582397	140264375	AATATATA others(3): Show AATATATATAT	A A	intron_variant intron_variant	MODIFIER	HG01109.hp2 HG02723.hp1 NA19079.hp1 HG01109.hp2 HG02723.hp1 NA19079.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0002c0021 a0001c0001 a0002c0002 a0002c0021	a0001c0001t0014 a0002c0002t0027 a0002c0021t0009 a0001c0001t0014 a0002c0002t0027 a0002c0021t0009	a0001c0001t0014g0001 a0002c0002t0027g0058 a0002c0021t0009g0030 a0001c0001t0014g0001 a0002c0002t0027g0058 a0002c0021t0009g0030	3	110	0.0273	-10	c.232 others(29): Show c.232+88346_232+88355delTATATATATA		CLSTN2	ENSG00000158258.16	transcript	ENST00000458420.7	protein_coding	2/16					INFO_REALIGN_3_PRIME	chr3	TogoVar
CLSTN2_chr3_139930185_140582397	140311287	CTTTTTTT others(3): Show CTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	NA19087.hp2 NA19087.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0001	a0002c0002t0001g0074 a0002c0002t0001g0074	1	110	0.0091	-10	c.233 others(29): Show c.233-92315_233-92306delTTTTTTTTTT		CLSTN2	ENSG00000158258.16	transcript	ENST00000458420.7	protein_coding	2/16					INFO_REALIGN_3_PRIME	chr3	TogoVar
CLSTN2_chr3_139930185_140582397	140333682	CTGTGTGT others(3): Show CTGTGTGTGTG	C C	intron_variant intron_variant	MODIFIER	HG01167.hp1 HG01169.hp2 HG01167.hp1 HG01169.hp2	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0012 a0001c0003t0012	a0001c0003t0012g0052 a0001c0003t0012g0053 a0001c0003t0012g0052 a0001c0003t0012g0053	2	110	0.0182	-10	c.233 others(29): Show c.233-69923_233-69914delGTGTGTGTGT		CLSTN2	ENSG00000158258.16	transcript	ENST00000458420.7	protein_coding	2/16					INFO_REALIGN_3_PRIME	chr3	TogoVar
CLSTN2_chr3_139930185_140582397	140419825	GTATATGT others(3): Show GTATATGTGTA	G G	intron_variant intron_variant	MODIFIER	HG01109.hp2 HG02559.hp2 HG02809.hp1 others(1): Show HG01109.hp2 HG02559.hp2 HG02809.hp1 HG03098.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0001c0018 a0002c0002 a0001c0001 a0001c0018 a0002c0002	a0001c0001t0001 a0001c0001t0002 a0001c0018t0002 others(1): Show a0001c0001t0001 a0001c0001t0002 a0001c0018t0002 a0002c0002t0027	a0001c0001t0001g0045 a0001c0001t0002g0105 a0001c0018t0002g0006 others(1): Show a0001c0001t0001g0045 a0001c0001t0002g0105 a0001c0018t0002g0006 a0002c0002t0027g0058	4	110	0.0364	-10	c.638 others(27): Show c.638-1294_638-1285delGTGTATATAT		CLSTN2	ENSG00000158258.16	transcript	ENST00000458420.7	protein_coding	4/16					INFO_REALIGN_3_PRIME	chr3	TogoVar
CLSTN2_chr3_139930185_140582397	140427219	ATATATGT others(3): Show ATATATGTGTG	A A	intron_variant intron_variant	MODIFIER	HG01109.hp2 HG02559.hp2 HG02809.hp1 HG01109.hp2 HG02559.hp2 HG02809.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0001c0018 a0002c0002 a0001c0001 a0001c0018 a0002c0002	a0001c0001t0002 a0001c0018t0002 a0002c0002t0027 a0001c0001t0002 a0001c0018t0002 a0002c0002t0027	a0001c0001t0002g0105 a0001c0018t0002g0006 a0002c0002t0027g0058 a0001c0001t0002g0105 a0001c0018t0002g0006 a0002c0002t0027g0058	3	110	0.0273	-10	c.787 others(27): Show c.787+5951_787+5960delGTGTGTATAT		CLSTN2	ENSG00000158258.16	transcript	ENST00000458420.7	protein_coding	5/16					INFO_REALIGN_3_PRIME	chr3	TogoVar
CLSTN2_chr3_139930185_140582397	140450722	GCACATAC others(3): Show GCACATACACA	G G	intron_variant intron_variant	MODIFIER	HG02257.hp2 HG02257.hp2	a0002 a0002	a0002c0023 a0002c0023	a0002c0023t0010 a0002c0023t0010	a0002c0023t0010g0104 a0002c0023t0010g0104	1	110	0.0091	-10	c.973 others(27): Show c.973+2033_973+2042delTACACACACA		CLSTN2	ENSG00000158258.16	transcript	ENST00000458420.7	protein_coding	6/16					INFO_REALIGN_3_PRIME	chr3	TogoVar
CLSTN2_chr3_139930185_140582397	140490117	TACACACA others(3): Show TACACACACAC	T T	intron_variant intron_variant	MODIFIER	HG01123.hp1 HG02922.hp2 HG01123.hp1 HG02922.hp2	a0001 a0001	a0001c0006 a0001c0006	a0001c0006t0002 a0001c0006t0004 a0001c0006t0002 a0001c0006t0004	a0001c0006t0002g0012 a0001c0006t0004g0013 a0001c0006t0002g0012 a0001c0006t0004g0013	2	110	0.0182	-10	c.134 others(31): Show c.1344+23422_1344+23431delCACACACACA		CLSTN2	ENSG00000158258.16	transcript	ENST00000458420.7	protein_coding	8/16					INFO_REALIGN_3_PRIME	chr3	TogoVar
CLTA_chr9_36185921_36217059	36186646	CTTTTTTT others(3): Show CTTTTTTTTTT	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	HG04199.hp2 NA18977.hp1 NA19087.hp2 others(1): Show HG04199.hp2 NA18977.hp1 NA19087.hp2 NA19089.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0002 a0001c0001t0002g0070 a0001c0001t0002g0002 a0001c0001t0002g0070	4	400	0.0100	-10	c.-44 others(21): Show c.-4410_-4401delTTTTTTTTTT		CLTA	ENSG00000122705.18	transcript	ENST00000345519.10	protein_coding					4274		chr9	TogoVar
CLTA_chr9_36185921_36217059	36197997	CTTTTTTT others(3): Show CTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG01255.hp2 HG02257.hp2 HG03041.hp2 others(2): Show HG01255.hp2 HG02257.hp2 HG03041.hp2 HG03453.hp2 HG03579.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0050 a0001c0001t0002g0158 a0001c0001t0002g0159 others(1): Show a0001c0001t0002g0050 a0001c0001t0002g0158 a0001c0001t0002g0159 a0001c0001t0002g0160	5	400	0.0125	-10	c.255 others(25): Show c.255+421_255+430delTTTTTTTTTT		CLTA	ENSG00000122705.18	transcript	ENST00000345519.10	protein_coding	2/4					INFO_REALIGN_3_PRIME	chr9	TogoVar
CLTCL1_chr22_19174473_19296719	19174604	CCCCAGCT others(3): Show CCCCAGCTGCA	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	NA18985.hp1 NA18985.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0192 a0001c0002t0001g0192	1	346	0.0029	-10	c.53 others(21): Show c.5376_*5385delTGCAGCTGGG		CLTCL1	ENSG00000070371.16	transcript	ENST00000427926.6	protein_coding					4868		chr22	TogoVar
CLTCL1_chr22_19174473_19296719	19183486	AAGCAGGT others(3): Show AAGCAGGTCAT	A A	frameshift_variant frameshift_variant	HIGH	HG01975.hp1 NA19068.hp1 HG01975.hp1 NA19068.hp1	a0012 a0012	a0012c0014 a0012c0014	a0012c0014t0002 a0012c0014t0012 a0012c0014t0002 a0012c0014t0012	a0012c0014t0002g0242 a0012c0014t0012g0338 a0012c0014t0002g0242 a0012c0014t0012g0338	2	346	0.0058	-10	c.472 others(19): Show c.4721_4730delATGACCTGCT	p.Tyr others(6): Show p.Tyr1574fs	CLTCL1	ENSG00000070371.16	transcript	ENST00000427926.6	protein_coding	30/33	4808/5518	4721/4923	1574/1640			chr22	TogoVar
CLTCL1_chr22_19174473_19296719	19291836	CCCCGCCT others(3): Show CCCCGCCTCTG	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01934.hp1 HG01952.hp2 HG02132.hp1 others(7): Show HG01934.hp1 HG01952.hp2 HG02132.hp1 HG02148.hp2 HG03831.hp1 NA18955.hp2 NA18966.hp2 NA19009.hp2 NA19081.hp1 NA20300.hp2	a0001 a0002 a0001 a0002	a0001c0002 a0001c0003 a0002c0001 a0001c0002 a0001c0003 a0002c0001	a0001c0002t0001 a0001c0003t0001 a0002c0001t0002 a0001c0002t0001 a0001c0003t0001 a0002c0001t0002	a0001c0002t0001g0150 a0001c0003t0001g0154 a0001c0003t0001g0155 others(7): Show a0001c0002t0001g0150 a0001c0003t0001g0154 a0001c0003t0001g0155 a0001c0003t0001g0168 a0001c0003t0001g0170 a0001c0003t0001g0173 a0001c0003t0001g0187 a0001c0003t0001g0189 a0002c0001t0002g0216 a0002c0001t0002g0247	10	346	0.0289	-10	c.-20 others(19): Show c.-205_-196delCAGAGGCGGG		CLTCL1	ENSG00000070371.16	transcript	ENST00000427926.6	protein_coding					118		chr22	TogoVar
CLTC_chr17_59614895_59701956	59617114	TTATATAT others(3): Show TTATATATATA	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01243.hp2 HG01891.hp1 HG01891.hp2 others(20): Show HG01243.hp2 HG01891.hp1 HG01891.hp2 HG02257.hp1 HG02280.hp2 HG02451.hp1 HG02486.hp1 HG02559.hp1 HG02559.hp2 HG02630.hp2 HG02647.hp2 HG02717.hp2 HG02818.hp1 HG02965.hp2 HG03098.hp2 HG03209.hp2 HG03453.hp2 HG03540.hp2 HG03579.hp1 HG06807.hp2 NA18993.hp2 NA19030.hp2 NA21309.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 others(4): Show a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0005 a0001c0001t0006 a0001c0001t0007 a0001c0001t0008	a0001c0001t0002g0166 a0001c0001t0003g0035 a0001c0001t0003g0038 others(19): Show a0001c0001t0002g0166 a0001c0001t0003g0035 a0001c0001t0003g0038 a0001c0001t0004g0068 a0001c0001t0004g0069 a0001c0001t0004g0070 a0001c0001t0004g0071 a0001c0001t0004g0072 a0001c0001t0004g0073 a0001c0001t0004g0074 a0001c0001t0004g0075 a0001c0001t0004g0076 a0001c0001t0004g0077 a0001c0001t0004g0078 a0001c0001t0004g0079 a0001c0001t0004g0080 a0001c0001t0004g0083 a0001c0001t0005g0041 a0001c0001t0005g0044 a0001c0001t0006g0060 a0001c0001t0007g0230 a0001c0001t0008g0003	23	260	0.0885	-10	c.-30 others(21): Show c.-3017_-3008delTATATATATA		CLTC	ENSG00000141367.13	transcript	ENST00000269122.8	protein_coding					2780		chr17	TogoVar
CLTC_chr17_59614895_59701956	59692328	AACTGGTT others(3): Show AACTGGTTTCC	A A	intron_variant intron_variant	MODIFIER	HG01169.hp2 HG01169.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0013 a0001c0001t0013	a0001c0001t0013g0180 a0001c0001t0013g0180	1	260	0.0039	-10	c.490 others(29): Show c.4904-1398_4904-1389delCTGGTTTCCA		CLTC	ENSG00000141367.13	transcript	ENST00000269122.8	protein_coding	31/31					INFO_REALIGN_3_PRIME	chr17	TogoVar
CLTRN_chrX_15622318_15669805	15641636	CTGTGTGT others(3): Show CTGTGTGTGTG	C C	intron_variant intron_variant	MODIFIER	HG00423.hp1 HG00597.hp1 HG00642.hp1 others(13): Show HG00423.hp1 HG00597.hp1 HG00642.hp1 HG01081.hp1 HG01099.hp1 HG01168.hp2 HG01943.hp1 HG02074.hp1 HG02083.hp1 HG02698.hp1 NA18961.hp1 NA18967.hp1 NA18975.hp1 NA18977.hp1 NA18978.hp1 NA19084.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0016 a0001c0001t0001g0017 a0001c0001t0001g0042 others(11): Show a0001c0001t0001g0016 a0001c0001t0001g0017 a0001c0001t0001g0042 a0001c0001t0001g0094 a0001c0001t0001g0122 a0001c0001t0001g0124 a0001c0001t0001g0151 a0001c0001t0001g0156 a0001c0001t0001g0163 a0001c0001t0001g0164 a0001c0001t0001g0173 a0001c0001t0001g0179 a0001c0001t0001g0180 a0001c0001t0001g0185	16	295	0.0542	-10	c.318 others(27): Show c.318-1890_318-1881delCACACACACA		CLTRN	ENSG00000147003.7	transcript	ENST00000380342.4	protein_coding	4/5						chrX	TogoVar
CLUAP1_chr16_3496004_3544048	3507680	TTGTGTGT others(3): Show TTGTGTGTGTG	T T	intron_variant intron_variant	MODIFIER	HG02896.hp1 HG02897.hp2 HG02896.hp1 HG02897.hp2	a0006 a0006	a0006c0007 a0006c0007	a0006c0007t0015 a0006c0007t0015	a0006c0007t0015g0041 a0006c0007t0015g0042 a0006c0007t0015g0041 a0006c0007t0015g0042	2	382	0.0052	-10	c.220 others(25): Show c.220-580_220-571delTGTGTGTGTG		CLUAP1	ENSG00000103351.13	transcript	ENST00000576634.6	protein_coding	3/11					INFO_REALIGN_3_PRIME	chr16	TogoVar
CLUAP1_chr16_3496004_3544048	3529505	TATATTAT others(3): Show TATATTATATA	T T	intron_variant intron_variant	MODIFIER	HG02896.hp1 HG02897.hp2 HG02896.hp1 HG02897.hp2	a0006 a0006	a0006c0007 a0006c0007	a0006c0007t0015 a0006c0007t0015	a0006c0007t0015g0041 a0006c0007t0015g0042 a0006c0007t0015g0041 a0006c0007t0015g0042	2	382	0.0052	-10	c.929 others(27): Show c.929-1060_929-1051delATTATATAAT		CLUAP1	ENSG00000103351.13	transcript	ENST00000576634.6	protein_coding	9/11					INFO_REALIGN_3_PRIME	chr16	TogoVar
CLUAP1_chr16_3496004_3544048	3529640	ATATTATA others(3): Show ATATTATATAT	A A	intron_variant intron_variant	MODIFIER	HG00140.hp2 HG00558.hp2 HG00741.hp1 others(16): Show HG00140.hp2 HG00558.hp2 HG00741.hp1 HG01070.hp1 HG01346.hp2 HG01975.hp2 HG02027.hp1 HG02027.hp2 HG02135.hp1 HG03239.hp2 HG03669.hp2 NA18950.hp1 NA18951.hp1 NA18974.hp2 NA18980.hp2 NA19010.hp1 NA19070.hp2 NA19074.hp2 NA20805.hp1	a0001 a0008 a0001 a0008	a0001c0001 a0001c0004 a0008c0009 a0001c0001 a0001c0004 a0008c0009	a0001c0001t0008 a0001c0004t0008 a0001c0004t0009 others(3): Show a0001c0001t0008 a0001c0004t0008 a0001c0004t0009 a0001c0004t0011 a0001c0004t0022 a0008c0009t0021	a0001c0001t0008g0021 a0001c0001t0008g0146 a0001c0001t0008g0151 others(12): Show a0001c0001t0008g0021 a0001c0001t0008g0146 a0001c0001t0008g0151 a0001c0001t0008g0152 a0001c0001t0008g0158 a0001c0001t0008g0159 a0001c0004t0008g0077 a0001c0004t0009g0004 a0001c0004t0011g0032 a0001c0004t0011g0034 a0001c0004t0011g0037 a0001c0004t0011g0038 a0001c0004t0011g0039 a0001c0004t0022g0035 a0008c0009t0021g0040	19	382	0.0497	-10	c.929 others(25): Show c.929-914_929-905delTATATATTAT		CLUAP1	ENSG00000103351.13	transcript	ENST00000576634.6	protein_coding	9/11					INFO_REALIGN_3_PRIME	chr16	TogoVar
CLUAP1_chr16_3496004_3544048	3529657	ATATTATA others(3): Show ATATTATATAT	A A	intron_variant intron_variant	MODIFIER	HG00639.hp1 HG02451.hp2 HG02486.hp2 others(7): Show HG00639.hp1 HG02451.hp2 HG02486.hp2 HG02559.hp2 HG02630.hp1 HG02922.hp2 HG02965.hp2 HG03139.hp2 HG03516.hp1 HG03516.hp2	a0001 a0004 a0001 a0004	a0001c0001 a0004c0005 a0001c0001 a0004c0005	a0001c0001t0003 a0001c0001t0010 a0004c0005t0005 a0001c0001t0003 a0001c0001t0010 a0004c0005t0005	a0001c0001t0003g0141 a0001c0001t0010g0242 a0004c0005t0005g0013 others(6): Show a0001c0001t0003g0141 a0001c0001t0010g0242 a0004c0005t0005g0013 a0004c0005t0005g0091 a0004c0005t0005g0093 a0004c0005t0005g0094 a0004c0005t0005g0095 a0004c0005t0005g0096 a0004c0005t0005g0162	10	382	0.0262	-10	c.929 others(25): Show c.929-897_929-888delTATATATTAT		CLUAP1	ENSG00000103351.13	transcript	ENST00000576634.6	protein_coding	9/11					INFO_REALIGN_3_PRIME	chr16	TogoVar

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