Joint Open Genome and Omics Platform (JoGo)

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regionname	pos	ref	alt	annotation	impact	samples	ahapids	chapids	thapids	thapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	status	chr	external
CNTN4_chr3_2093866_3062959	2658965	GACACACA others(3): Show GACACACACAC	G G	intron_variant intron_variant	MODIFIER	HG02451.hp2 HG02897.hp1 HG03654.hp1 HG02451.hp2 HG02897.hp1 HG03654.hp1	a0001 a0001	a0001c0002 a0001c0003 a0001c0004 a0001c0002 a0001c0003 a0001c0004	a0001c0002t0005 a0001c0003t0003 a0001c0004t0006 a0001c0002t0005 a0001c0003t0003 a0001c0004t0006	a0001c0002t0005g0002 a0001c0003t0003g0015 a0001c0004t0006g0068 a0001c0002t0005g0002 a0001c0003t0003g0015 a0001c0004t0006g0068	3	116	0.0259	-10	c.56- others(27): Show c.56-77214_56-77205delCACACACACA	CNTN4	ENSG00000144619.15	transcript	ENST00000418658.6	protein_coding	4/24	INFO_REALIGN_3_PRIME	chr3	TogoVar
CNTN4_chr3_2093866_3062959	2659479	AAAAGAAG others(3): Show AAAAGAAGAAG	A A	intron_variant intron_variant	MODIFIER	HG00738.hp1 HG02602.hp1 HG02809.hp1 others(2): Show HG00738.hp1 HG02602.hp1 HG02809.hp1 HG02886.hp2 HG03471.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0003 a0001c0001 a0001c0002 a0001c0003	a0001c0001t0002 a0001c0001t0003 a0001c0002t0001 others(2): Show a0001c0001t0002 a0001c0001t0003 a0001c0002t0001 a0001c0002t0007 a0001c0003t0003	a0001c0001t0002g0030 a0001c0001t0003g0058 a0001c0002t0001g0021 others(2): Show a0001c0001t0002g0030 a0001c0001t0003g0058 a0001c0002t0001g0021 a0001c0002t0007g0112 a0001c0003t0003g0046	5	116	0.0431	-10	c.56- others(27): Show c.56-76733_56-76724delAGAAGAAGAA	CNTN4	ENSG00000144619.15	transcript	ENST00000418658.6	protein_coding	4/24	INFO_REALIGN_3_PRIME	chr3	TogoVar
CNTN4_chr3_2093866_3062959	2704295	TCAAAAAA others(3): Show TCAAAAAAAAA	T T	intron_variant intron_variant	MODIFIER	HG03041.hp2 NA18906.hp1 HG03041.hp2 NA18906.hp1	a0001 a0002 a0001 a0002	a0001c0005 a0002c0015 a0001c0005 a0002c0015	a0001c0005t0010 a0002c0015t0003 a0001c0005t0010 a0002c0015t0003	a0001c0005t0010g0001 a0002c0015t0003g0103 a0001c0005t0010g0001 a0002c0015t0003g0103	2	116	0.0172	-10	c.56- others(27): Show c.56-31919_56-31910delCAAAAAAAAA	CNTN4	ENSG00000144619.15	transcript	ENST00000418658.6	protein_coding	4/24		chr3	TogoVar
CNTN4_chr3_2093866_3062959	2704296	CAAAAAAA others(3): Show CAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG02258.hp1 HG02258.hp1	a0001 a0001	a0001c0006 a0001c0006	a0001c0006t0002 a0001c0006t0002	a0001c0006t0002g0026 a0001c0006t0002g0026	1	116	0.0086	-10	c.56- others(27): Show c.56-31903_56-31894delAAAAAAAAAA	CNTN4	ENSG00000144619.15	transcript	ENST00000418658.6	protein_coding	4/24	INFO_REALIGN_3_PRIME	chr3	TogoVar
CNTN4_chr3_2093866_3062959	2708727	TCACACAC others(3): Show TCACACACACA	T T	intron_variant intron_variant	MODIFIER	HG01243.hp2 HG01891.hp1 HG02165.hp1 others(8): Show HG01243.hp2 HG01891.hp1 HG02165.hp1 HG02451.hp1 HG02486.hp1 HG02572.hp1 HG02615.hp1 HG03453.hp1 HG03471.hp2 HG06807.hp1 NA19043.hp2	a0001 a0009 a0001 a0009	a0001c0001 a0001c0002 a0001c0004 others(2): Show a0001c0001 a0001c0002 a0001c0004 a0001c0021 a0009c0027	a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 others(5): Show a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0002t0001 a0001c0002t0002 a0001c0004t0001 a0001c0021t0002 a0009c0027t0001	a0001c0001t0002g0086 a0001c0001t0003g0008 a0001c0001t0004g0081 others(8): Show a0001c0001t0002g0086 a0001c0001t0003g0008 a0001c0001t0004g0081 a0001c0002t0001g0021 a0001c0002t0001g0027 a0001c0002t0001g0029 a0001c0002t0001g0110 a0001c0002t0002g0102 a0001c0004t0001g0020 a0001c0021t0002g0025 a0009c0027t0001g0007	11	116	0.0948	-10	c.56- others(27): Show c.56-27456_56-27447delACACACACAC	CNTN4	ENSG00000144619.15	transcript	ENST00000418658.6	protein_coding	4/24	INFO_REALIGN_3_PRIME	chr3	TogoVar
CNTN4_chr3_2093866_3062959	2761437	CCTGTGTG others(3): Show CCTGTGTGTGT	C C	intron_variant intron_variant	MODIFIER	HG00140.hp1 HG00639.hp2 HG00642.hp2 others(34): Show HG00140.hp1 HG00639.hp2 HG00642.hp2 HG00735.hp2 HG00738.hp2 HG01169.hp1 HG01175.hp1 HG01175.hp2 HG01243.hp1 HG01256.hp2 HG01257.hp1 HG01257.hp2 HG01258.hp1 HG01261.hp1 HG01361.hp1 HG01884.hp1 HG02165.hp2 HG02258.hp1 HG02451.hp2 HG02486.hp2 HG02572.hp2 HG02615.hp2 HG02683.hp1 HG02683.hp2 HG02717.hp2 HG02809.hp1 HG02818.hp2 HG02886.hp1 HG03041.hp1 HG03139.hp1 HG03239.hp1 HG03239.hp2 HG03471.hp1 HG03486.hp1 HG03927.hp1 HG06807.hp2 NA19043.hp2	a0001 a0003 a0004 others(1): Show a0001 a0003 a0004 a0007	a0001c0001 a0001c0002 a0001c0003 others(11): Show a0001c0001 a0001c0002 a0001c0003 a0001c0004 a0001c0005 a0001c0006 a0001c0009 a0001c0010 a0001c0013 a0001c0023 a0001c0025 a0003c0008 a0004c0011 a0007c0018	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(24): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0005 a0001c0001t0008 a0001c0002t0002 a0001c0002t0003 a0001c0002t0005 a0001c0003t0001 a0001c0003t0002 a0001c0003t0006 a0001c0003t0011 a0001c0004t0001 a0001c0004t0002 a0001c0004t0006 a0001c0005t0006 a0001c0005t0009 a0001c0005t0010 a0001c0006t0002 a0001c0009t0014 a0001c0010t0003 a0001c0013t0007 a0001c0023t0004 a0001c0025t0001 a0003c0008t0013 a0004c0011t0003 a0007c0018t0003	a0001c0001t0001g0033 a0001c0001t0001g0050 a0001c0001t0001g0099 others(34): Show a0001c0001t0001g0033 a0001c0001t0001g0050 a0001c0001t0001g0099 a0001c0001t0002g0055 a0001c0001t0002g0086 a0001c0001t0003g0058 a0001c0001t0003g0101 a0001c0001t0005g0054 a0001c0001t0005g0098 a0001c0001t0005g0115 a0001c0001t0008g0043 a0001c0001t0008g0053 a0001c0002t0002g0063 a0001c0002t0003g0114 a0001c0002t0005g0003 a0001c0003t0001g0037 a0001c0003t0001g0094 a0001c0003t0002g0061 a0001c0003t0002g0107 a0001c0003t0006g0040 a0001c0003t0011g0113 a0001c0004t0001g0097 a0001c0004t0001g0106 a0001c0004t0002g0064 a0001c0004t0006g0068 a0001c0005t0006g0010 a0001c0005t0009g0091 a0001c0005t0010g0085 a0001c0006t0002g0026 a0001c0009t0014g0039 a0001c0010t0003g0077 a0001c0013t0007g0056 a0001c0023t0004g0041 a0001c0025t0001g0100 a0003c0008t0013g0109 a0004c0011t0003g0065 a0007c0018t0003g0062	37	116	0.3190	-10	c.358 others(29): Show c.358+15741_358+15750delCTGTGTGTGT	CNTN4	ENSG00000144619.15	transcript	ENST00000418658.6	protein_coding	6/24		chr3	TogoVar
CNTN4_chr3_2093866_3062959	2776968	TTTTTGTT others(3): Show TTTTTGTTTTG	T T	intron_variant intron_variant	MODIFIER	NA19043.hp1 NA19043.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0095 a0001c0001t0003g0095	1	116	0.0086	-10	c.358 others(29): Show c.358+31291_358+31300delGTTTTGTTTT	CNTN4	ENSG00000144619.15	transcript	ENST00000418658.6	protein_coding	6/24	INFO_REALIGN_3_PRIME	chr3	TogoVar
CNTN4_chr3_2093866_3062959	2781716	ATTTTTTT others(3): Show ATTTTTTTTTT	A A	intron_variant intron_variant	MODIFIER	HG02257.hp2 HG02559.hp2 HG02615.hp1 others(2): Show HG02257.hp2 HG02559.hp2 HG02615.hp1 HG03540.hp2 NA18990.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0003 others(1): Show a0001c0001 a0001c0002 a0001c0003 a0001c0006	a0001c0001t0004 a0001c0001t0008 a0001c0002t0007 others(2): Show a0001c0001t0004 a0001c0001t0008 a0001c0002t0007 a0001c0003t0001 a0001c0006t0002	a0001c0001t0004g0081 a0001c0001t0008g0089 a0001c0002t0007g0087 others(2): Show a0001c0001t0004g0081 a0001c0001t0008g0089 a0001c0002t0007g0087 a0001c0003t0001g0116 a0001c0006t0002g0051	5	116	0.0431	-10	c.358 others(29): Show c.358+36036_358+36045delTTTTTTTTTT	CNTN4	ENSG00000144619.15	transcript	ENST00000418658.6	protein_coding	6/24	INFO_REALIGN_3_PRIME	chr3	TogoVar
CNTN4_chr3_2093866_3062959	2782465	CTGTGTGT others(3): Show CTGTGTGTGTG	C C	intron_variant intron_variant	MODIFIER	HG01169.hp1 HG01175.hp2 HG01256.hp2 others(6): Show HG01169.hp1 HG01175.hp2 HG01256.hp2 HG01261.hp1 HG02074.hp1 HG02523.hp1 HG02572.hp1 HG02622.hp1 HG02738.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0001c0002 a0001c0003 others(3): Show a0001c0001 a0001c0002 a0001c0003 a0001c0005 a0001c0009 a0002c0014	a0001c0001t0002 a0001c0002t0001 a0001c0003t0001 others(4): Show a0001c0001t0002 a0001c0002t0001 a0001c0003t0001 a0001c0003t0006 a0001c0005t0006 a0001c0009t0004 a0002c0014t0001	a0001c0001t0002g0055 a0001c0002t0001g0038 a0001c0002t0001g0110 others(6): Show a0001c0001t0002g0055 a0001c0002t0001g0038 a0001c0002t0001g0110 a0001c0003t0001g0014 a0001c0003t0001g0037 a0001c0003t0006g0040 a0001c0005t0006g0010 a0001c0009t0004g0005 a0002c0014t0001g0016	9	116	0.0776	-10	c.358 others(29): Show c.358+36810_358+36819delGTGTGTGTGT	CNTN4	ENSG00000144619.15	transcript	ENST00000418658.6	protein_coding	6/24	INFO_REALIGN_3_PRIME	chr3	TogoVar
CNTN4_chr3_2093866_3062959	3003684	CAAAAAAA others(3): Show CAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG03486.hp2 HG03486.hp2	a0001 a0001	a0001c0024 a0001c0024	a0001c0024t0015 a0001c0024t0015	a0001c0024t0015g0057 a0001c0024t0015g0057	1	116	0.0086	-10	c.148 others(31): Show c.1486+15233_1486+15242delAAAAAAAAAA	CNTN4	ENSG00000144619.15	transcript	ENST00000418658.6	protein_coding	14/24	INFO_REALIGN_3_PRIME	chr3	TogoVar
CNTN4_chr3_2093866_3062959	3019765	AATATATA others(3): Show AATATATATAT	A A	intron_variant intron_variant	MODIFIER	HG00140.hp1 HG00140.hp2 HG00438.hp1 others(30): Show HG00140.hp1 HG00140.hp2 HG00438.hp1 HG00735.hp1 HG01169.hp1 HG01256.hp2 HG01257.hp1 HG01258.hp1 HG01261.hp2 HG01361.hp1 HG01978.hp1 HG02074.hp2 HG02132.hp1 HG02132.hp2 HG02165.hp1 HG02257.hp1 HG02258.hp1 HG02451.hp2 HG02523.hp2 HG02559.hp2 HG02615.hp2 HG02717.hp2 HG03041.hp1 HG03041.hp2 HG03139.hp1 HG03209.hp2 HG03239.hp2 HG03471.hp1 HG03486.hp1 HG03516.hp2 HG03831.hp1 NA18906.hp1 NA19043.hp2	a0001 a0002 a0003 others(2): Show a0001 a0002 a0003 a0004 a0008	a0001c0001 a0001c0004 a0001c0005 others(8): Show a0001c0001 a0001c0004 a0001c0005 a0001c0006 a0001c0007 a0001c0022 a0001c0023 a0002c0015 a0003c0008 a0004c0011 a0008c0026	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(16): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0005 a0001c0001t0008 a0001c0004t0001 a0001c0004t0002 a0001c0004t0006 a0001c0005t0006 a0001c0005t0010 a0001c0006t0002 a0001c0007t0016 a0001c0022t0003 a0001c0023t0004 a0002c0015t0003 a0003c0008t0013 a0004c0011t0003 a0008c0026t0017	a0001c0001t0001g0012 a0001c0001t0001g0033 a0001c0001t0001g0099 others(30): Show a0001c0001t0001g0012 a0001c0001t0001g0033 a0001c0001t0001g0099 a0001c0001t0002g0028 a0001c0001t0002g0055 a0001c0001t0002g0074 a0001c0001t0002g0086 a0001c0001t0003g0101 a0001c0001t0004g0042 a0001c0001t0005g0115 a0001c0001t0008g0043 a0001c0004t0001g0020 a0001c0004t0001g0036 a0001c0004t0001g0097 a0001c0004t0001g0106 a0001c0004t0002g0022 a0001c0004t0002g0076 a0001c0004t0006g0044 a0001c0004t0006g0068 a0001c0005t0006g0010 a0001c0005t0006g0032 a0001c0005t0010g0001 a0001c0005t0010g0085 a0001c0006t0002g0026 a0001c0006t0002g0051 a0001c0007t0016g0105 a0001c0022t0003g0083 a0001c0023t0004g0041 a0002c0015t0003g0103 a0003c0008t0013g0109 a0004c0011t0003g0065 a0004c0011t0003g0111 a0008c0026t0017g0047	33	116	0.2845	-10	c.148 others(29): Show c.1487-6313_1487-6304delTATATATATA	CNTN4	ENSG00000144619.15	transcript	ENST00000418658.6	protein_coding	14/24	INFO_REALIGN_3_PRIME	chr3	TogoVar
CNTN4_chr3_2093866_3062959	3024384	TAAAAAAA others(3): Show TAAAAAAAAAA	T T	intron_variant intron_variant	MODIFIER	HG01891.hp2 HG01891.hp2	a0001 a0001	a0001c0006 a0001c0006	a0001c0006t0003 a0001c0006t0003	a0001c0006t0003g0069 a0001c0006t0003g0069	1	116	0.0086	-10	c.148 others(29): Show c.1487-1703_1487-1694delAAAAAAAAAA	CNTN4	ENSG00000144619.15	transcript	ENST00000418658.6	protein_coding	14/24	INFO_REALIGN_3_PRIME	chr3	TogoVar
CNTN4_chr3_2093866_3062959	3038776	GCCGTGGG others(3): Show GCCGTGGGCCC	G G	intron_variant intron_variant	MODIFIER	HG00639.hp1 HG01261.hp2 HG01361.hp1 others(12): Show HG00639.hp1 HG01261.hp2 HG01361.hp1 HG01891.hp2 HG02258.hp2 HG02572.hp2 HG02602.hp1 HG02647.hp2 HG02683.hp2 HG02738.hp1 HG02886.hp2 HG02897.hp1 HG03654.hp2 HG04184.hp1 NA18990.hp2	a0001 a0004 a0006 a0001 a0004 a0006	a0001c0001 a0001c0002 a0001c0003 others(5): Show a0001c0001 a0001c0002 a0001c0003 a0001c0006 a0001c0007 a0001c0010 a0004c0011 a0006c0028	a0001c0001t0002 a0001c0002t0001 a0001c0002t0005 others(7): Show a0001c0001t0002 a0001c0002t0001 a0001c0002t0005 a0001c0003t0001 a0001c0003t0003 a0001c0006t0003 a0001c0007t0003 a0001c0010t0003 a0004c0011t0003 a0006c0028t0001	a0001c0001t0002g0030 a0001c0002t0001g0038 a0001c0002t0005g0002 others(12): Show a0001c0001t0002g0030 a0001c0002t0001g0038 a0001c0002t0005g0002 a0001c0002t0005g0003 a0001c0003t0001g0045 a0001c0003t0001g0075 a0001c0003t0001g0094 a0001c0003t0003g0046 a0001c0003t0003g0070 a0001c0006t0003g0069 a0001c0007t0003g0034 a0001c0010t0003g0011 a0004c0011t0003g0065 a0004c0011t0003g0111 a0006c0028t0001g0023	15	116	0.1293	-10	c.209 others(27): Show c.2093-155_2093-146delCGTGGGCCCC	CNTN4	ENSG00000144619.15	transcript	ENST00000418658.6	protein_coding	18/24	INFO_REALIGN_3_PRIME	chr3	TogoVar
CNTN5_chr11_99015949_100363885	99065735	CATTAGAG others(3): Show CATTAGAGTTG	C C	intron_variant intron_variant	MODIFIER	HG01496.hp1 HG02258.hp1 HG02723.hp1 others(2): Show HG01496.hp1 HG02258.hp1 HG02723.hp1 HG03471.hp2 NA18522.hp2	a0001 a0002 a0003 others(1): Show a0001 a0002 a0003 a0010	a0001c0001 a0002c0002 a0003c0003 others(1): Show a0001c0001 a0002c0002 a0003c0003 a0010c0010	a0001c0001t0001 a0001c0001t0004 a0002c0002t0021 others(2): Show a0001c0001t0001 a0001c0001t0004 a0002c0002t0021 a0003c0003t0007 a0010c0010t0011	a0001c0001t0001g0008 a0001c0001t0004g0029 a0002c0002t0021g0055 others(2): Show a0001c0001t0001g0008 a0001c0001t0004g0029 a0002c0002t0021g0055 a0003c0003t0007g0057 a0010c0010t0011g0009	5	66	0.0758	-10	c.-21 others(31): Show c.-210+44469_-210+44478delAGAGTTGATT	CNTN5	ENSG00000149972.12	transcript	ENST00000524871.6	protein_coding	1/24	INFO_REALIGN_3_PRIME	chr11	TogoVar
CNTN5_chr11_99015949_100363885	99178314	CCACACAC others(3): Show CCACACACACA	C C	intron_variant intron_variant	MODIFIER	HG01099.hp1 HG02109.hp1 HG03130.hp2 others(4): Show HG01099.hp1 HG02109.hp1 HG03130.hp2 HG03471.hp2 HG06807.hp1 HG06807.hp2 NA19000.hp2	a0001 a0004 a0005 others(1): Show a0001 a0004 a0005 a0006	a0001c0001 a0004c0004 a0005c0005 others(1): Show a0001c0001 a0004c0004 a0005c0005 a0006c0006	a0001c0001t0001 a0001c0001t0004 a0001c0001t0006 others(3): Show a0001c0001t0001 a0001c0001t0004 a0001c0001t0006 a0004c0004t0002 a0005c0005t0010 a0006c0006t0013	a0001c0001t0001g0020 a0001c0001t0004g0010 a0001c0001t0004g0029 others(4): Show a0001c0001t0001g0020 a0001c0001t0004g0010 a0001c0001t0004g0029 a0001c0001t0006g0040 a0004c0004t0002g0001 a0005c0005t0010g0006 a0006c0006t0013g0025	7	66	0.1061	-10	c.-20 others(33): Show c.-209-146987_-209-146978delCACACACACA	CNTN5	ENSG00000149972.12	transcript	ENST00000524871.6	protein_coding	1/24	INFO_REALIGN_3_PRIME	chr11	TogoVar
CNTN5_chr11_99015949_100363885	99268039	AGTTAAGG others(3): Show AGTTAAGGTAT	A A	intron_variant intron_variant	MODIFIER	HG01099.hp1 HG02735.hp1 NA18939.hp2 others(2): Show HG01099.hp1 HG02735.hp1 NA18939.hp2 NA18957.hp2 NA19000.hp2	a0001 a0003 a0004 others(1): Show a0001 a0003 a0004 a0007	a0001c0001 a0003c0003 a0004c0004 others(1): Show a0001c0001 a0003c0003 a0004c0004 a0007c0007	a0001c0001t0004 a0001c0001t0006 a0003c0003t0002 others(2): Show a0001c0001t0004 a0001c0001t0006 a0003c0003t0002 a0004c0004t0002 a0007c0007t0023	a0001c0001t0004g0010 a0001c0001t0006g0032 a0003c0003t0002g0002 others(2): Show a0001c0001t0004g0010 a0001c0001t0006g0032 a0003c0003t0002g0002 a0004c0004t0002g0001 a0007c0007t0023g0046	5	66	0.0758	-10	c.-20 others(31): Show c.-209-57304_-209-57295delTAAGGTATGT	CNTN5	ENSG00000149972.12	transcript	ENST00000524871.6	protein_coding	1/24	INFO_REALIGN_3_PRIME	chr11	TogoVar
CNTN5_chr11_99015949_100363885	99284600	GGTGTGTG others(3): Show GGTGTGTGTGT	G G	intron_variant intron_variant	MODIFIER	HG00733.hp1 HG00735.hp1 HG01243.hp1 others(9): Show HG00733.hp1 HG00735.hp1 HG01243.hp1 HG02257.hp2 HG02895.hp1 HG02965.hp1 HG03041.hp2 HG03130.hp1 HG03471.hp2 HG06807.hp2 NA18522.hp1 NA19070.hp2	a0001 a0002 a0005 others(1): Show a0001 a0002 a0005 a0006	a0001c0001 a0002c0002 a0005c0005 others(1): Show a0001c0001 a0002c0002 a0005c0005 a0006c0006	a0001c0001t0001 a0001c0001t0004 a0001c0001t0009 others(8): Show a0001c0001t0001 a0001c0001t0004 a0001c0001t0009 a0001c0001t0010 a0001c0001t0014 a0001c0001t0015 a0002c0002t0004 a0002c0002t0005 a0005c0005t0001 a0006c0006t0009 a0006c0006t0011	a0001c0001t0001g0020 a0001c0001t0004g0029 a0001c0001t0009g0063 others(9): Show a0001c0001t0001g0020 a0001c0001t0004g0029 a0001c0001t0009g0063 a0001c0001t0010g0023 a0001c0001t0014g0016 a0001c0001t0015g0064 a0002c0002t0004g0007 a0002c0002t0004g0039 a0002c0002t0005g0015 a0005c0005t0001g0035 a0006c0006t0009g0042 a0006c0006t0011g0033	12	66	0.1818	-10	c.-20 others(31): Show c.-209-40694_-209-40685delTGTGTGTGTG	CNTN5	ENSG00000149972.12	transcript	ENST00000524871.6	protein_coding	1/24	INFO_REALIGN_3_PRIME	chr11	TogoVar
CNTN5_chr11_99015949_100363885	99329914	GACACACA others(3): Show GACACACACAC	G G	intron_variant intron_variant	MODIFIER	HG00735.hp1 HG01169.hp1 HG03471.hp2 HG00735.hp1 HG01169.hp1 HG03471.hp2	a0001 a0006 a0001 a0006	a0001c0001 a0006c0006 a0001c0001 a0006c0006	a0001c0001t0004 a0001c0001t0009 a0006c0006t0009 a0001c0001t0004 a0001c0001t0009 a0006c0006t0009	a0001c0001t0004g0029 a0001c0001t0009g0043 a0006c0006t0009g0042 a0001c0001t0004g0029 a0001c0001t0009g0043 a0006c0006t0009g0042	3	66	0.0455	-10	c.-71 others(27): Show c.-71+4464_-71+4473delCACACACACA	CNTN5	ENSG00000149972.12	transcript	ENST00000524871.6	protein_coding	2/24	INFO_REALIGN_3_PRIME	chr11	TogoVar
CNTN5_chr11_99015949_100363885	99361789	ATCATCCG others(3): Show ATCATCCGTGT	A A	intron_variant intron_variant	MODIFIER	HG00733.hp2 HG00735.hp2 HG01496.hp1 others(10): Show HG00733.hp2 HG00735.hp2 HG01496.hp1 HG02602.hp2 HG02723.hp2 HG03041.hp1 HG03471.hp1 HG03471.hp2 HG06807.hp1 NA18957.hp2 NA19000.hp1 NA19070.hp2 NA20300.hp1	a0001 a0002 a0003 others(3): Show a0001 a0002 a0003 a0006 a0008 a0009	a0001c0001 a0002c0002 a0003c0003 others(3): Show a0001c0001 a0002c0002 a0003c0003 a0006c0006 a0008c0008 a0009c0012	a0001c0001t0001 a0001c0001t0004 a0001c0001t0005 others(9): Show a0001c0001t0001 a0001c0001t0004 a0001c0001t0005 a0001c0001t0011 a0001c0001t0014 a0002c0002t0021 a0002c0002t0022 a0003c0003t0002 a0006c0006t0013 a0006c0006t0014 a0008c0008t0007 a0009c0012t0008	a0001c0001t0001g0053 a0001c0001t0004g0029 a0001c0001t0004g0044 others(10): Show a0001c0001t0001g0053 a0001c0001t0004g0029 a0001c0001t0004g0044 a0001c0001t0005g0048 a0001c0001t0011g0062 a0001c0001t0014g0016 a0002c0002t0021g0055 a0002c0002t0022g0013 a0003c0003t0002g0002 a0006c0006t0013g0025 a0006c0006t0014g0058 a0008c0008t0007g0038 a0009c0012t0008g0026	13	66	0.1970	-10	c.-71 others(29): Show c.-71+36306_-71+36315delTCATCCGTGT	CNTN5	ENSG00000149972.12	transcript	ENST00000524871.6	protein_coding	2/24		chr11	TogoVar
CNTN5_chr11_99015949_100363885	99382844	ACTTTTTT others(3): Show ACTTTTTTTTT	A A	intron_variant intron_variant	MODIFIER	HG01169.hp1 HG02258.hp1 HG02886.hp1 others(1): Show HG01169.hp1 HG02258.hp1 HG02886.hp1 HG02976.hp1	a0001 a0003 a0010 a0001 a0003 a0010	a0001c0001 a0003c0003 a0010c0010 a0001c0001 a0003c0003 a0010c0010	a0001c0001t0009 a0003c0003t0002 a0003c0003t0007 others(1): Show a0001c0001t0009 a0003c0003t0002 a0003c0003t0007 a0010c0010t0011	a0001c0001t0009g0043 a0003c0003t0002g0027 a0003c0003t0007g0034 others(1): Show a0001c0001t0009g0043 a0003c0003t0002g0027 a0003c0003t0007g0034 a0010c0010t0011g0009	4	66	0.0606	-10	c.-71 others(29): Show c.-71+57361_-71+57370delCTTTTTTTTT	CNTN5	ENSG00000149972.12	transcript	ENST00000524871.6	protein_coding	2/24		chr11	TogoVar
CNTN5_chr11_99015949_100363885	99388982	CTTATTTT others(3): Show CTTATTTTATT	C C	intron_variant intron_variant	MODIFIER	HG01081.hp1 HG01243.hp2 HG02258.hp2 others(4): Show HG01081.hp1 HG01243.hp2 HG02258.hp2 HG02976.hp2 HG03471.hp1 HG06807.hp1 NA18522.hp2	a0001 a0003 a0005 others(2): Show a0001 a0003 a0005 a0006 a0008	a0001c0001 a0003c0003 a0005c0005 others(2): Show a0001c0001 a0003c0003 a0005c0005 a0006c0006 a0008c0008	a0001c0001t0005 a0003c0003t0007 a0005c0005t0001 others(4): Show a0001c0001t0005 a0003c0003t0007 a0005c0005t0001 a0005c0005t0003 a0005c0005t0018 a0006c0006t0013 a0008c0008t0007	a0001c0001t0005g0014 a0003c0003t0007g0057 a0005c0005t0001g0017 others(4): Show a0001c0001t0005g0014 a0003c0003t0007g0057 a0005c0005t0001g0017 a0005c0005t0003g0045 a0005c0005t0018g0028 a0006c0006t0013g0025 a0008c0008t0007g0038	7	66	0.1061	-10	c.-71 others(29): Show c.-71+63551_-71+63560delATTTTATTTT	CNTN5	ENSG00000149972.12	transcript	ENST00000524871.6	protein_coding	2/24	INFO_REALIGN_3_PRIME	chr11	TogoVar
CNTN5_chr11_99015949_100363885	99408438	AAGAAAGA others(3): Show AAGAAAGAAAG	A A	intron_variant intron_variant	MODIFIER	HG02723.hp1 HG02965.hp2 NA18939.hp2 HG02723.hp1 HG02965.hp2 NA18939.hp2	a0001 a0007 a0001 a0007	a0001c0001 a0007c0007 a0001c0001 a0007c0007	a0001c0001t0001 a0001c0001t0003 a0007c0007t0023 a0001c0001t0001 a0001c0001t0003 a0007c0007t0023	a0001c0001t0001g0008 a0001c0001t0003g0022 a0007c0007t0023g0046 a0001c0001t0001g0008 a0001c0001t0003g0022 a0007c0007t0023g0046	3	66	0.0455	-10	c.-71 others(29): Show c.-71+82966_-71+82975delGAAAGAAAGA	CNTN5	ENSG00000149972.12	transcript	ENST00000524871.6	protein_coding	2/24	INFO_REALIGN_3_PRIME	chr11	TogoVar
CNTN5_chr11_99015949_100363885	99422516	TTTTATAT others(3): Show TTTTATATATA	T T	intron_variant intron_variant	MODIFIER	HG06807.hp1 NA18957.hp1 HG06807.hp1 NA18957.hp1	a0001 a0006 a0001 a0006	a0001c0001 a0006c0006 a0001c0001 a0006c0006	a0001c0001t0001 a0006c0006t0013 a0001c0001t0001 a0006c0006t0013	a0001c0001t0001g0052 a0006c0006t0013g0025 a0001c0001t0001g0052 a0006c0006t0013g0025	2	66	0.0303	-10	c.-71 others(29): Show c.-71+97034_-71+97043delTTATATATAT	CNTN5	ENSG00000149972.12	transcript	ENST00000524871.6	protein_coding	2/24	INFO_REALIGN_3_PRIME	chr11	TogoVar
CNTN5_chr11_99015949_100363885	99422518	TTATATAT others(3): Show TTATATATATA	T T	intron_variant intron_variant	MODIFIER	HG02004.hp1 HG02004.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0054 a0001c0001t0001g0054	1	66	0.0152	-10	c.-71 others(29): Show c.-71+97068_-71+97077delATATATATAT	CNTN5	ENSG00000149972.12	transcript	ENST00000524871.6	protein_coding	2/24	INFO_REALIGN_3_PRIME	chr11	TogoVar
CNTN5_chr11_99015949_100363885	99448730	TTTTTATT others(3): Show TTTTTATTTTA	T T	intron_variant intron_variant	MODIFIER	HG01496.hp1 HG02132.hp1 HG02132.hp2 others(2): Show HG01496.hp1 HG02132.hp1 HG02132.hp2 HG02257.hp2 HG02735.hp1	a0001 a0002 a0004 a0001 a0002 a0004	a0001c0001 a0002c0002 a0004c0004 a0001c0001 a0002c0002 a0004c0004	a0001c0001t0006 a0001c0001t0015 a0001c0001t0016 others(2): Show a0001c0001t0006 a0001c0001t0015 a0001c0001t0016 a0002c0002t0021 a0004c0004t0002	a0001c0001t0006g0032 a0001c0001t0015g0064 a0001c0001t0016g0049 others(2): Show a0001c0001t0006g0032 a0001c0001t0015g0064 a0001c0001t0016g0049 a0002c0002t0021g0055 a0004c0004t0002g0051	5	66	0.0758	-10	c.-70 others(31): Show c.-70-107360_-70-107351delATTTTATTTT	CNTN5	ENSG00000149972.12	transcript	ENST00000524871.6	protein_coding	2/24	INFO_REALIGN_3_PRIME	chr11	TogoVar
CNTN5_chr11_99015949_100363885	99450257	AATATATA others(3): Show AATATATATAT	A A	intron_variant intron_variant	MODIFIER	HG00735.hp2 HG01081.hp2 HG01496.hp1 others(16): Show HG00735.hp2 HG01081.hp2 HG01496.hp1 HG02132.hp1 HG02132.hp2 HG02257.hp2 HG02258.hp1 HG02602.hp1 HG02723.hp1 HG02735.hp1 HG02895.hp1 HG03041.hp1 HG03041.hp2 HG03130.hp2 HG06807.hp1 HG06807.hp2 NA18957.hp2 NA19000.hp1 NA20300.hp2	a0001 a0002 a0003 others(5): Show a0001 a0002 a0003 a0004 a0006 a0009 a0010 a0012	a0001c0001 a0002c0002 a0003c0003 others(5): Show a0001c0001 a0002c0002 a0003c0003 a0004c0004 a0006c0006 a0009c0012 a0010c0010 a0012c0013	a0001c0001t0001 a0001c0001t0006 a0001c0001t0010 others(12): Show a0001c0001t0001 a0001c0001t0006 a0001c0001t0010 a0001c0001t0011 a0001c0001t0015 a0001c0001t0016 a0002c0002t0005 a0002c0002t0021 a0003c0003t0002 a0004c0004t0002 a0006c0006t0013 a0006c0006t0014 a0009c0012t0008 a0010c0010t0011 a0012c0013t0008	a0001c0001t0001g0008 a0001c0001t0001g0020 a0001c0001t0006g0032 others(16): Show a0001c0001t0001g0008 a0001c0001t0001g0020 a0001c0001t0006g0032 a0001c0001t0006g0040 a0001c0001t0006g0066 a0001c0001t0010g0023 a0001c0001t0010g0047 a0001c0001t0011g0062 a0001c0001t0015g0064 a0001c0001t0016g0049 a0002c0002t0005g0015 a0002c0002t0021g0055 a0003c0003t0002g0002 a0004c0004t0002g0051 a0006c0006t0013g0025 a0006c0006t0014g0058 a0009c0012t0008g0026 a0010c0010t0011g0009 a0012c0013t0008g0031	19	66	0.2879	-10	c.-70 others(31): Show c.-70-105869_-70-105860delATATATATAT	CNTN5	ENSG00000149972.12	transcript	ENST00000524871.6	protein_coding	2/24	INFO_REALIGN_3_PRIME	chr11	TogoVar
CNTN5_chr11_99015949_100363885	99523597	GATAGAAT others(3): Show GATAGAATAGA	G G	intron_variant intron_variant	MODIFIER	HG00735.hp2 NA18957.hp2 NA19000.hp2 HG00735.hp2 NA18957.hp2 NA19000.hp2	a0001 a0003 a0004 a0001 a0003 a0004	a0001c0001 a0003c0003 a0004c0004 a0001c0001 a0003c0003 a0004c0004	a0001c0001t0011 a0003c0003t0002 a0004c0004t0002 a0001c0001t0011 a0003c0003t0002 a0004c0004t0002	a0001c0001t0011g0062 a0003c0003t0002g0002 a0004c0004t0002g0001 a0001c0001t0011g0062 a0003c0003t0002g0002 a0004c0004t0002g0001	3	66	0.0455	-10	c.-70 others(29): Show c.-70-32501_-70-32492delTAGAATAGAA	CNTN5	ENSG00000149972.12	transcript	ENST00000524871.6	protein_coding	2/24	INFO_REALIGN_3_PRIME	chr11	TogoVar
CNTN5_chr11_99015949_100363885	99523644	TAGAATAG others(3): Show TAGAATAGAAC	T T	intron_variant intron_variant	MODIFIER	HG01169.hp1 HG01934.hp2 HG02965.hp1 others(3): Show HG01169.hp1 HG01934.hp2 HG02965.hp1 HG03041.hp2 HG03471.hp2 NA19070.hp1	a0001 a0002 a0003 others(1): Show a0001 a0002 a0003 a0006	a0001c0001 a0002c0002 a0003c0003 others(1): Show a0001c0001 a0002c0002 a0003c0003 a0006c0006	a0001c0001t0004 a0001c0001t0009 a0001c0001t0010 others(3): Show a0001c0001t0004 a0001c0001t0009 a0001c0001t0010 a0002c0002t0001 a0003c0003t0002 a0006c0006t0011	a0001c0001t0004g0029 a0001c0001t0009g0043 a0001c0001t0010g0023 others(3): Show a0001c0001t0004g0029 a0001c0001t0009g0043 a0001c0001t0010g0023 a0002c0002t0001g0003 a0003c0003t0002g0011 a0006c0006t0011g0033	6	66	0.0909	-10	c.-70 others(29): Show c.-70-32496_-70-32487delTAGAACAGAA	CNTN5	ENSG00000149972.12	transcript	ENST00000524871.6	protein_coding	2/24	INFO_REALIGN_3_PRIME	chr11	TogoVar
CNTN5_chr11_99015949_100363885	99523653	ACAGAACA others(3): Show ACAGAACAGAT	A A	intron_variant intron_variant	MODIFIER	HG00738.hp2 HG02109.hp2 HG02132.hp2 others(4): Show HG00738.hp2 HG02109.hp2 HG02132.hp2 HG02258.hp2 HG02965.hp2 NA18939.hp2 NA19070.hp2	a0001 a0004 a0005 others(1): Show a0001 a0004 a0005 a0007	a0001c0001 a0004c0004 a0005c0005 others(1): Show a0001c0001 a0004c0004 a0005c0005 a0007c0007	a0001c0001t0003 a0001c0001t0014 a0004c0004t0002 others(2): Show a0001c0001t0003 a0001c0001t0014 a0004c0004t0002 a0005c0005t0003 a0007c0007t0023	a0001c0001t0003g0021 a0001c0001t0003g0022 a0001c0001t0014g0016 others(4): Show a0001c0001t0003g0021 a0001c0001t0003g0022 a0001c0001t0014g0016 a0004c0004t0002g0041 a0004c0004t0002g0051 a0005c0005t0003g0045 a0007c0007t0023g0046	7	66	0.1061	-10	c.-70 others(29): Show c.-70-32482_-70-32473delTCAGAACAGA	CNTN5	ENSG00000149972.12	transcript	ENST00000524871.6	protein_coding	2/24	INFO_REALIGN_3_PRIME	chr11	TogoVar
CNTN5_chr11_99015949_100363885	99528942	ATAATACC others(3): Show ATAATACCAGC	A A	intron_variant intron_variant	MODIFIER	HG02257.hp1 HG02257.hp2 HG02602.hp2 others(7): Show HG02257.hp1 HG02257.hp2 HG02602.hp2 HG02735.hp1 HG02895.hp2 HG03471.hp1 NA18522.hp2 NA18939.hp1 NA18957.hp1 NA19070.hp1	a0001 a0002 a0003 others(2): Show a0001 a0002 a0003 a0004 a0008	a0001c0001 a0002c0002 a0003c0003 others(3): Show a0001c0001 a0002c0002 a0003c0003 a0003c0011 a0004c0004 a0008c0008	a0001c0001t0001 a0001c0001t0006 a0001c0001t0015 others(6): Show a0001c0001t0001 a0001c0001t0006 a0001c0001t0015 a0002c0002t0001 a0003c0003t0007 a0003c0003t0017 a0003c0011t0019 a0004c0004t0013 a0008c0008t0007	a0001c0001t0001g0052 a0001c0001t0001g0053 a0001c0001t0006g0032 others(7): Show a0001c0001t0001g0052 a0001c0001t0001g0053 a0001c0001t0006g0032 a0001c0001t0015g0064 a0002c0002t0001g0003 a0003c0003t0007g0057 a0003c0003t0017g0065 a0003c0011t0019g0059 a0004c0004t0013g0050 a0008c0008t0007g0038	10	66	0.1515	-10	c.-70 others(29): Show c.-70-27190_-70-27181delATACCAGCTA	CNTN5	ENSG00000149972.12	transcript	ENST00000524871.6	protein_coding	2/24	INFO_REALIGN_3_PRIME	chr11	TogoVar
CNTN5_chr11_99015949_100363885	99553987	CACACACA others(3): Show CACACACACAT	C C	intron_variant intron_variant	MODIFIER	HG02886.hp1 HG03471.hp1 HG02886.hp1 HG03471.hp1	a0003 a0008 a0003 a0008	a0003c0003 a0008c0008 a0003c0003 a0008c0008	a0003c0003t0002 a0008c0008t0007 a0003c0003t0002 a0008c0008t0007	a0003c0003t0002g0027 a0008c0008t0007g0038 a0003c0003t0002g0027 a0008c0008t0007g0038	2	66	0.0303	-10	c.-70 others(27): Show c.-70-2148_-70-2139delTACACACACA	CNTN5	ENSG00000149972.12	transcript	ENST00000524871.6	protein_coding	2/24	INFO_REALIGN_3_PRIME	chr11	TogoVar
CNTN5_chr11_99015949_100363885	99625915	TATATATA others(3): Show TATATATATAC	T T	intron_variant intron_variant	MODIFIER	HG00738.hp1 HG01099.hp2 HG02109.hp2 others(2): Show HG00738.hp1 HG01099.hp2 HG02109.hp2 HG02965.hp2 NA19043.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0003 a0002c0002t0003 a0002c0002t0008 a0001c0001t0003 a0002c0002t0003 a0002c0002t0008	a0001c0001t0003g0021 a0001c0001t0003g0022 a0002c0002t0003g0036 others(2): Show a0001c0001t0003g0021 a0001c0001t0003g0022 a0002c0002t0003g0036 a0002c0002t0003g0037 a0002c0002t0008g0019	5	66	0.0758	-10	c.55+ others(27): Show c.55+69648_55+69657delTATATATACA	CNTN5	ENSG00000149972.12	transcript	ENST00000524871.6	protein_coding	3/24	INFO_REALIGN_3_PRIME	chr11	TogoVar
CNTN5_chr11_99015949_100363885	99625919	TATATACA others(3): Show TATATACACAC	T T	intron_variant intron_variant	MODIFIER	HG01123.hp2 HG01169.hp1 HG01169.hp2 others(14): Show HG01123.hp2 HG01169.hp1 HG01169.hp2 HG01496.hp2 HG01934.hp1 HG01934.hp2 HG02004.hp2 HG02602.hp1 HG02895.hp2 HG02976.hp2 HG03471.hp2 HG06807.hp1 HG06807.hp2 NA18522.hp1 NA18939.hp1 NA19000.hp1 NA19070.hp1	a0001 a0002 a0003 others(3): Show a0001 a0002 a0003 a0004 a0005 a0006	a0001c0001 a0002c0002 a0003c0003 others(3): Show a0001c0001 a0002c0002 a0003c0003 a0004c0004 a0005c0005 a0006c0006	a0001c0001t0001 a0001c0001t0004 a0001c0001t0006 others(11): Show a0001c0001t0001 a0001c0001t0004 a0001c0001t0006 a0001c0001t0009 a0001c0001t0012 a0002c0002t0001 a0002c0002t0004 a0003c0003t0002 a0003c0003t0017 a0004c0004t0013 a0005c0005t0001 a0006c0006t0001 a0006c0006t0013 a0006c0006t0014	a0001c0001t0001g0004 a0001c0001t0001g0020 a0001c0001t0004g0029 others(14): Show a0001c0001t0001g0004 a0001c0001t0001g0020 a0001c0001t0004g0029 a0001c0001t0006g0066 a0001c0001t0009g0043 a0001c0001t0012g0018 a0001c0001t0012g0030 a0002c0002t0001g0003 a0002c0002t0004g0007 a0003c0003t0002g0011 a0003c0003t0002g0012 a0003c0003t0017g0065 a0004c0004t0013g0050 a0005c0005t0001g0017 a0006c0006t0001g0005 a0006c0006t0013g0025 a0006c0006t0014g0058	17	66	0.2576	-10	c.55+ others(27): Show c.55+69652_55+69661delTATACACACA	CNTN5	ENSG00000149972.12	transcript	ENST00000524871.6	protein_coding	3/24	INFO_REALIGN_3_PRIME	chr11	TogoVar
CNTN5_chr11_99015949_100363885	99630247	CATATATA others(3): Show CATATATATAT	C C	intron_variant intron_variant	MODIFIER	HG00735.hp2 HG00738.hp2 HG01169.hp1 others(3): Show HG00735.hp2 HG00738.hp2 HG01169.hp1 HG02602.hp1 NA18957.hp2 NA19000.hp2	a0001 a0003 a0004 a0001 a0003 a0004	a0001c0001 a0003c0003 a0004c0004 a0001c0001 a0003c0003 a0004c0004	a0001c0001t0006 a0001c0001t0009 a0001c0001t0011 others(2): Show a0001c0001t0006 a0001c0001t0009 a0001c0001t0011 a0003c0003t0002 a0004c0004t0002	a0001c0001t0006g0066 a0001c0001t0009g0043 a0001c0001t0011g0062 others(3): Show a0001c0001t0006g0066 a0001c0001t0009g0043 a0001c0001t0011g0062 a0003c0003t0002g0002 a0004c0004t0002g0001 a0004c0004t0002g0041	6	66	0.0909	-10	c.55+ others(27): Show c.55+73991_55+74000delATATATATAT	CNTN5	ENSG00000149972.12	transcript	ENST00000524871.6	protein_coding	3/24	INFO_REALIGN_3_PRIME	chr11	TogoVar
CNTN5_chr11_99015949_100363885	99669464	GTGTGTGT others(3): Show GTGTGTGTGTA	G G	intron_variant intron_variant	MODIFIER	HG00738.hp1 HG01099.hp2 HG02109.hp2 others(5): Show HG00738.hp1 HG01099.hp2 HG02109.hp2 HG02257.hp1 HG02886.hp2 HG02965.hp2 NA18522.hp2 NA19043.hp2	a0001 a0002 a0003 others(1): Show a0001 a0002 a0003 a0004	a0001c0001 a0002c0002 a0003c0003 others(2): Show a0001c0001 a0002c0002 a0003c0003 a0003c0011 a0004c0004	a0001c0001t0003 a0002c0002t0003 a0002c0002t0008 others(3): Show a0001c0001t0003 a0002c0002t0003 a0002c0002t0008 a0003c0003t0007 a0003c0011t0019 a0004c0004t0020	a0001c0001t0003g0021 a0001c0001t0003g0022 a0002c0002t0003g0036 others(5): Show a0001c0001t0003g0021 a0001c0001t0003g0022 a0002c0002t0003g0036 a0002c0002t0003g0037 a0002c0002t0008g0019 a0003c0003t0007g0057 a0003c0011t0019g0059 a0004c0004t0020g0024	8	66	0.1212	-10	c.55+ others(29): Show c.55+113197_55+113206delGTGTGTGTAT	CNTN5	ENSG00000149972.12	transcript	ENST00000524871.6	protein_coding	3/24	INFO_REALIGN_3_PRIME	chr11	TogoVar
CNTN5_chr11_99015949_100363885	99669466	GTGTGTGT others(3): Show GTGTGTGTATA	G G	intron_variant intron_variant	MODIFIER	HG00733.hp1 HG01081.hp2 HG01123.hp2 others(15): Show HG00733.hp1 HG01081.hp2 HG01123.hp2 HG01169.hp1 HG01169.hp2 HG01496.hp2 HG01934.hp1 HG01934.hp2 HG02004.hp2 HG02132.hp1 HG02258.hp1 HG02895.hp1 HG03130.hp1 HG03130.hp2 HG03471.hp2 HG06807.hp1 HG06807.hp2 NA20300.hp1	a0001 a0002 a0003 others(3): Show a0001 a0002 a0003 a0005 a0006 a0010	a0001c0001 a0002c0002 a0003c0003 others(3): Show a0001c0001 a0002c0002 a0003c0003 a0005c0005 a0006c0006 a0010c0010	a0001c0001t0001 a0001c0001t0004 a0001c0001t0005 others(11): Show a0001c0001t0001 a0001c0001t0004 a0001c0001t0005 a0001c0001t0006 a0001c0001t0009 a0001c0001t0010 a0001c0001t0012 a0001c0001t0016 a0002c0002t0005 a0003c0003t0002 a0005c0005t0001 a0006c0006t0001 a0006c0006t0013 a0010c0010t0011	a0001c0001t0001g0004 a0001c0001t0001g0020 a0001c0001t0004g0029 others(15): Show a0001c0001t0001g0004 a0001c0001t0001g0020 a0001c0001t0004g0029 a0001c0001t0005g0048 a0001c0001t0006g0040 a0001c0001t0009g0043 a0001c0001t0009g0063 a0001c0001t0010g0047 a0001c0001t0012g0018 a0001c0001t0012g0030 a0001c0001t0016g0049 a0002c0002t0005g0015 a0003c0003t0002g0011 a0003c0003t0002g0012 a0005c0005t0001g0035 a0006c0006t0001g0005 a0006c0006t0013g0025 a0010c0010t0011g0009	18	66	0.2727	-10	c.55+ others(29): Show c.55+113203_55+113212delGTATATGTGT	CNTN5	ENSG00000149972.12	transcript	ENST00000524871.6	protein_coding	3/24	INFO_REALIGN_3_PRIME	chr11	TogoVar
CNTN5_chr11_99015949_100363885	99737134	CACACACA others(3): Show CACACACACAA	C C	intron_variant intron_variant	MODIFIER	HG01243.hp1 HG02258.hp1 HG02895.hp1 HG01243.hp1 HG02258.hp1 HG02895.hp1	a0002 a0010 a0002 a0010	a0002c0002 a0010c0010 a0002c0002 a0010c0010	a0002c0002t0004 a0002c0002t0005 a0010c0010t0011 a0002c0002t0004 a0002c0002t0005 a0010c0010t0011	a0002c0002t0004g0039 a0002c0002t0005g0015 a0010c0010t0011g0009 a0002c0002t0004g0039 a0002c0002t0005g0015 a0010c0010t0011g0009	3	66	0.0455	-10	c.56- others(27): Show c.56-82400_56-82391delAACACACACA	CNTN5	ENSG00000149972.12	transcript	ENST00000524871.6	protein_coding	3/24	INFO_REALIGN_3_PRIME	chr11	TogoVar
CNTN5_chr11_99015949_100363885	99857014	CTCTCTAT others(3): Show CTCTCTATCTA	C C	intron_variant intron_variant	MODIFIER	HG01169.hp1 HG02723.hp2 HG01169.hp1 HG02723.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0009 a0001c0001t0004 a0001c0001t0009	a0001c0001t0004g0044 a0001c0001t0009g0043 a0001c0001t0004g0044 a0001c0001t0009g0043	2	66	0.0303	-10	c.577 others(29): Show c.577+11762_577+11771delATCTCTATCT	CNTN5	ENSG00000149972.12	transcript	ENST00000524871.6	protein_coding	6/24	INFO_REALIGN_3_PRIME	chr11	TogoVar
CNTN5_chr11_99015949_100363885	99889291	GGTGTGTG others(3): Show GGTGTGTGTGT	G G	intron_variant intron_variant	MODIFIER	HG00738.hp2 HG01123.hp1 HG01169.hp1 others(14): Show HG00738.hp2 HG01123.hp1 HG01169.hp1 HG01496.hp2 HG01934.hp1 HG02109.hp2 HG02723.hp2 HG02735.hp2 HG02886.hp1 HG02886.hp2 HG02965.hp2 HG02976.hp1 HG03041.hp2 HG03471.hp1 HG06807.hp2 NA18522.hp1 NA18957.hp1	a0001 a0002 a0003 others(2): Show a0001 a0002 a0003 a0004 a0008	a0001c0001 a0002c0002 a0003c0003 others(2): Show a0001c0001 a0002c0002 a0003c0003 a0004c0004 a0008c0008	a0001c0001t0001 a0001c0001t0003 a0001c0001t0004 others(9): Show a0001c0001t0001 a0001c0001t0003 a0001c0001t0004 a0001c0001t0009 a0001c0001t0010 a0001c0001t0012 a0002c0002t0004 a0003c0003t0002 a0003c0003t0007 a0004c0004t0002 a0004c0004t0020 a0008c0008t0007	a0001c0001t0001g0020 a0001c0001t0001g0052 a0001c0001t0003g0021 others(14): Show a0001c0001t0001g0020 a0001c0001t0001g0052 a0001c0001t0003g0021 a0001c0001t0003g0022 a0001c0001t0003g0060 a0001c0001t0004g0044 a0001c0001t0009g0043 a0001c0001t0010g0023 a0001c0001t0012g0018 a0001c0001t0012g0030 a0002c0002t0004g0007 a0003c0003t0002g0027 a0003c0003t0002g0061 a0003c0003t0007g0034 a0004c0004t0002g0041 a0004c0004t0020g0024 a0008c0008t0007g0038	17	66	0.2576	-10	c.578 others(29): Show c.578-26706_578-26697delGTGTGTGTGT	CNTN5	ENSG00000149972.12	transcript	ENST00000524871.6	protein_coding	6/24	INFO_REALIGN_3_PRIME	chr11	TogoVar
CNTN5_chr11_99015949_100363885	99934898	GTATATAT others(3): Show GTATATATATA	G G	intron_variant intron_variant	MODIFIER	NA18522.hp2 NA18522.hp2	a0003 a0003	a0003c0003 a0003c0003	a0003c0003t0007 a0003c0003t0007	a0003c0003t0007g0057 a0003c0003t0007g0057	1	66	0.0152	-10	c.673 others(29): Show c.673+18790_673+18799delTATATATATA	CNTN5	ENSG00000149972.12	transcript	ENST00000524871.6	protein_coding	7/24	INFO_REALIGN_3_PRIME	chr11	TogoVar
CNTN5_chr11_99015949_100363885	99934939	TATATATA others(3): Show TATATATATAC	T T	intron_variant intron_variant	MODIFIER	HG01934.hp1 HG02965.hp1 HG03041.hp2 others(3): Show HG01934.hp1 HG02965.hp1 HG03041.hp2 HG03471.hp2 HG06807.hp1 NA19000.hp2	a0001 a0004 a0006 a0001 a0004 a0006	a0001c0001 a0004c0004 a0006c0006 a0001c0001 a0004c0004 a0006c0006	a0001c0001t0004 a0001c0001t0010 a0001c0001t0012 others(3): Show a0001c0001t0004 a0001c0001t0010 a0001c0001t0012 a0004c0004t0002 a0006c0006t0011 a0006c0006t0013	a0001c0001t0004g0029 a0001c0001t0010g0023 a0001c0001t0012g0030 others(3): Show a0001c0001t0004g0029 a0001c0001t0010g0023 a0001c0001t0012g0030 a0004c0004t0002g0001 a0006c0006t0011g0033 a0006c0006t0013g0025	6	66	0.0909	-10	c.673 others(29): Show c.673+18792_673+18801delTATATATACA	CNTN5	ENSG00000149972.12	transcript	ENST00000524871.6	protein_coding	7/24	INFO_REALIGN_3_PRIME	chr11	TogoVar
CNTN5_chr11_99015949_100363885	99981097	TATATATA others(3): Show TATATATACAC	T T	intron_variant intron_variant	MODIFIER	HG00733.hp1 HG00735.hp1 HG00738.hp1 others(17): Show HG00733.hp1 HG00735.hp1 HG00738.hp1 HG01099.hp2 HG01123.hp1 HG01243.hp2 HG02109.hp2 HG02602.hp1 HG02602.hp2 HG02723.hp2 HG02886.hp1 HG02965.hp2 HG03130.hp2 HG06807.hp1 HG06807.hp2 NA18522.hp1 NA18522.hp2 NA19043.hp2 NA20300.hp1 NA20300.hp2	a0001 a0002 a0003 others(2): Show a0001 a0002 a0003 a0006 a0012	a0001c0001 a0002c0002 a0003c0003 others(2): Show a0001c0001 a0002c0002 a0003c0003 a0006c0006 a0012c0013	a0001c0001t0001 a0001c0001t0003 a0001c0001t0004 others(11): Show a0001c0001t0001 a0001c0001t0003 a0001c0001t0004 a0001c0001t0005 a0001c0001t0006 a0001c0001t0009 a0002c0002t0003 a0002c0002t0004 a0002c0002t0008 a0003c0003t0002 a0003c0003t0007 a0006c0006t0009 a0006c0006t0013 a0012c0013t0008	a0001c0001t0001g0020 a0001c0001t0001g0053 a0001c0001t0003g0021 others(17): Show a0001c0001t0001g0020 a0001c0001t0001g0053 a0001c0001t0003g0021 a0001c0001t0003g0022 a0001c0001t0003g0060 a0001c0001t0004g0044 a0001c0001t0005g0014 a0001c0001t0005g0048 a0001c0001t0006g0040 a0001c0001t0006g0066 a0001c0001t0009g0063 a0002c0002t0003g0036 a0002c0002t0003g0037 a0002c0002t0004g0007 a0002c0002t0008g0019 a0003c0003t0002g0027 a0003c0003t0007g0057 a0006c0006t0009g0042 a0006c0006t0013g0025 a0012c0013t0008g0031	20	66	0.3030	-10	c.878 others(29): Show c.878-20935_878-20926delTATATACACA	CNTN5	ENSG00000149972.12	transcript	ENST00000524871.6	protein_coding	8/24	INFO_REALIGN_3_PRIME	chr11	TogoVar
CNTN5_chr11_99015949_100363885	100113417	CAAAAAAA others(3): Show CAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG00735.hp1 HG01099.hp1 HG01169.hp2 others(12): Show HG00735.hp1 HG01099.hp1 HG01169.hp2 HG01496.hp1 HG02004.hp1 HG02132.hp1 HG02602.hp2 HG02723.hp1 HG02976.hp2 HG03130.hp1 HG06807.hp1 HG06807.hp2 NA18522.hp2 NA18957.hp1 NA19070.hp1	a0001 a0002 a0003 others(2): Show a0001 a0002 a0003 a0005 a0006	a0001c0001 a0002c0002 a0003c0003 others(2): Show a0001c0001 a0002c0002 a0003c0003 a0005c0005 a0006c0006	a0001c0001t0001 a0001c0001t0004 a0001c0001t0016 others(7): Show a0001c0001t0001 a0001c0001t0004 a0001c0001t0016 a0002c0002t0001 a0002c0002t0021 a0003c0003t0007 a0005c0005t0001 a0006c0006t0001 a0006c0006t0009 a0006c0006t0013	a0001c0001t0001g0008 a0001c0001t0001g0020 a0001c0001t0001g0052 others(12): Show a0001c0001t0001g0008 a0001c0001t0001g0020 a0001c0001t0001g0052 a0001c0001t0001g0053 a0001c0001t0001g0054 a0001c0001t0004g0010 a0001c0001t0016g0049 a0002c0002t0001g0003 a0002c0002t0021g0055 a0003c0003t0007g0057 a0005c0005t0001g0017 a0005c0005t0001g0035 a0006c0006t0001g0005 a0006c0006t0009g0042 a0006c0006t0013g0025	15	66	0.2273	-10	c.158 others(31): Show c.1580+39150_1580+39159delAAAAAAAAAA	CNTN5	ENSG00000149972.12	transcript	ENST00000524871.6	protein_coding	13/24	INFO_REALIGN_3_PRIME	chr11	TogoVar
CNTN5_chr11_99015949_100363885	100161830	TACACACA others(3): Show TACACACACAC	T T	intron_variant intron_variant	MODIFIER	HG00735.hp1 HG01099.hp1 HG01123.hp2 others(8): Show HG00735.hp1 HG01099.hp1 HG01123.hp2 HG01934.hp2 HG02004.hp1 HG02109.hp1 HG02132.hp1 HG02132.hp2 HG02602.hp2 NA18957.hp1 NA19000.hp2	a0001 a0003 a0004 others(2): Show a0001 a0003 a0004 a0005 a0006	a0001c0001 a0003c0003 a0004c0004 others(2): Show a0001c0001 a0003c0003 a0004c0004 a0005c0005 a0006c0006	a0001c0001t0001 a0001c0001t0004 a0001c0001t0016 others(4): Show a0001c0001t0001 a0001c0001t0004 a0001c0001t0016 a0003c0003t0002 a0004c0004t0002 a0005c0005t0010 a0006c0006t0009	a0001c0001t0001g0052 a0001c0001t0001g0053 a0001c0001t0001g0054 others(8): Show a0001c0001t0001g0052 a0001c0001t0001g0053 a0001c0001t0001g0054 a0001c0001t0004g0010 a0001c0001t0016g0049 a0003c0003t0002g0011 a0003c0003t0002g0012 a0004c0004t0002g0001 a0004c0004t0002g0051 a0005c0005t0010g0006 a0006c0006t0009g0042	11	66	0.1667	-10	c.158 others(31): Show c.1581-29262_1581-29253delCACACACACA	CNTN5	ENSG00000149972.12	transcript	ENST00000524871.6	protein_coding	13/24	INFO_REALIGN_3_PRIME	chr11	TogoVar
CNTN5_chr11_99015949_100363885	100178879	ATCCCAAA others(3): Show ATCCCAAAGAT	A A	intron_variant intron_variant	MODIFIER	HG02109.hp1 HG02109.hp1	a0005 a0005	a0005c0005 a0005c0005	a0005c0005t0010 a0005c0005t0010	a0005c0005t0010g0006 a0005c0005t0010g0006	1	66	0.0152	-10	c.158 others(31): Show c.1581-12244_1581-12235delCCAAAGATTC	CNTN5	ENSG00000149972.12	transcript	ENST00000524871.6	protein_coding	13/24	INFO_REALIGN_3_PRIME	chr11	TogoVar
CNTN5_chr11_99015949_100363885	100204297	AATATATA others(3): Show AATATATATAT	A A	intron_variant intron_variant	MODIFIER	HG01081.hp1 HG01081.hp1	a0005 a0005	a0005c0005 a0005c0005	a0005c0005t0018 a0005c0005t0018	a0005c0005t0018g0028 a0005c0005t0018g0028	1	66	0.0152	-10	c.188 others(31): Show c.1884+10672_1884+10681delTATATATATA	CNTN5	ENSG00000149972.12	transcript	ENST00000524871.6	protein_coding	15/24	INFO_REALIGN_3_PRIME	chr11	TogoVar
CNTN6_chr3_1088024_1409217	1106521	TACACACA others(3): Show TACACACACAC	T T	intron_variant intron_variant	MODIFIER	HG02523.hp2 HG02523.hp2	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0001 a0001c0003t0001	a0001c0003t0001g0226 a0001c0003t0001g0226	1	232	0.0043	-10	c.-83 others(29): Show c.-83+13414_-83+13423delACACACACAC	CNTN6	ENSG00000134115.13	transcript	ENST00000446702.7	protein_coding	1/22	INFO_REALIGN_3_PRIME	chr3	TogoVar
CNTN6_chr3_1088024_1409217	1134686	TTTTTGTT others(3): Show TTTTTGTTTTG	T T	intron_variant intron_variant	MODIFIER	HG02055.hp2 HG02559.hp2 HG02615.hp2 others(2): Show HG02055.hp2 HG02559.hp2 HG02615.hp2 HG03225.hp2 NA18906.hp1	a0001 a0002 a0001 a0002	a0001c0002 a0001c0007 a0001c0008 others(1): Show a0001c0002 a0001c0007 a0001c0008 a0002c0014	a0001c0002t0008 a0001c0007t0001 a0001c0008t0001 others(1): Show a0001c0002t0008 a0001c0007t0001 a0001c0008t0001 a0002c0014t0001	a0001c0002t0008g0221 a0001c0007t0001g0222 a0001c0008t0001g0211 others(2): Show a0001c0002t0008g0221 a0001c0007t0001g0222 a0001c0008t0001g0211 a0001c0008t0001g0212 a0002c0014t0001g0220	5	232	0.0216	-10	c.-82 others(29): Show c.-82-13221_-82-13212delGTTTTGTTTT	CNTN6	ENSG00000134115.13	transcript	ENST00000446702.7	protein_coding	1/22	INFO_REALIGN_3_PRIME	chr3	TogoVar
CNTN6_chr3_1088024_1409217	1142968	GTATATAT others(3): Show GTATATATATA	G G	intron_variant intron_variant	MODIFIER	HG01074.hp1 HG01515.hp2 HG01517.hp1 others(3): Show HG01074.hp1 HG01515.hp2 HG01517.hp1 HG02258.hp2 HG03239.hp1 HG03471.hp1	a0001 a0001	a0001c0001 a0001c0003 a0001c0005 a0001c0001 a0001c0003 a0001c0005	a0001c0001t0001 a0001c0003t0001 a0001c0005t0001 a0001c0001t0001 a0001c0003t0001 a0001c0005t0001	a0001c0001t0001g0067 a0001c0001t0001g0095 a0001c0001t0001g0096 others(3): Show a0001c0001t0001g0067 a0001c0001t0001g0095 a0001c0001t0001g0096 a0001c0003t0001g0144 a0001c0005t0001g0159 a0001c0005t0001g0181	6	232	0.0259	-10	c.-82 others(27): Show c.-82-4933_-82-4924delATATATATAT	CNTN6	ENSG00000134115.13	transcript	ENST00000446702.7	protein_coding	1/22	INFO_REALIGN_3_PRIME	chr3	TogoVar
CNTN6_chr3_1088024_1409217	1158829	TATACACA others(3): Show TATACACACAC	T T	intron_variant intron_variant	MODIFIER	HG01167.hp2 HG01169.hp2 HG02698.hp2 others(2): Show HG01167.hp2 HG01169.hp2 HG02698.hp2 HG04204.hp2 NA18522.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0006 others(1): Show a0001c0001 a0001c0002 a0001c0006 a0001c0019	a0001c0001t0001 a0001c0002t0001 a0001c0006t0001 others(1): Show a0001c0001t0001 a0001c0002t0001 a0001c0006t0001 a0001c0019t0001	a0001c0001t0001g0082 a0001c0002t0001g0121 a0001c0006t0001g0200 others(2): Show a0001c0001t0001g0082 a0001c0002t0001g0121 a0001c0006t0001g0200 a0001c0006t0001g0201 a0001c0019t0001g0202	5	232	0.0216	-10	c.55+ others(27): Show c.55+10770_55+10779delCACACACATA	CNTN6	ENSG00000134115.13	transcript	ENST00000446702.7	protein_coding	2/22	INFO_REALIGN_3_PRIME	chr3	TogoVar

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