Joint Open Genome and Omics Platform (JoGo)

Search by Variant

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Chr

Chromosome name (e.g., chr11).

Snpeff genename

Exact SnpEff gene name.

Sampleids

Target sampleid (e.g. HG02615).

Snpeff haplotype class

Haplotype-annotation class (e.g., ahapid, ahapid+chapid).

Snpeff annotation impact

Exact impact level (e.g., HIGH, MODERATE, LOW).

Snpeff annotation impact detail

Keyword match in SnpEff annotation.

Hapid

One or more haplotype IDs (comma-separated; e.g., a0001, a01, a0001c0001, a01c02, a1c2, a0001c0001t0005, a0001c0001t0005g0018).

Samplehapid

Sample haplotype IDs to include (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

No_hapid

Haplotype IDs to exclude (comma-separated; e.g., a0001, a0002, a0001c0001, a0001c0001t0005, a1, a01).

No_samplehapid

Sample haplotype IDs to exclude (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

Start

Start position (GRCh38).

End

End position (GRCh38).

Minac

Minimum alternate allele count (≥).

Maxac

Maximum alternate allele count (≤).

Minlen

Minimum variant length (≥).

Maxlen

Maximum variant length (≤).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	pos	ref	alt	annotation	impact	samples	ahapids	achapids	acthapids	actghapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
AFF1_chr4_86930011_87146039	86985181	CTATATAT others(3): Show CTATATATATA	C C	intron_variant intron_variant	MODIFIER	HG03834.hp2 HG03834.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0189 a0001c0001t0002g0189	1	294	0.0034	-10	c.38+ others(27): Show c.38+36635_38+36644delTATATATATA	AFF1	ENSG00000172493.23	transcript	ENST00000395146.9	protein_coding	2/20		INFO_REALIGN_3_PRIME	chr4	TogoVar
AFF1_chr4_86930011_87146039	86986035	CAATTCAA others(3): Show CAATTCAATTT	C C	intron_variant intron_variant	MODIFIER	HG01192.hp2 HG02809.hp2 HG03041.hp2 others(1): Show HG01192.hp2 HG02809.hp2 HG03041.hp2 NA19240.hp2	a0001 a0018 a0001 a0018	a0001c0001 a0001c0002 a0018c0013 a0001c0001 a0001c0002 a0018c0013	a0001c0001t0024 a0001c0001t0045 a0001c0002t0005 others(1): Show a0001c0001t0024 a0001c0001t0045 a0001c0002t0005 a0018c0013t0070	a0001c0001t0024g0080 a0001c0001t0045g0093 a0001c0002t0005g0185 others(1): Show a0001c0001t0024g0080 a0001c0001t0045g0093 a0001c0002t0005g0185 a0018c0013t0070g0010	4	294	0.0136	-10	c.38+ others(27): Show c.38+37469_38+37478delCAATTTAATT	AFF1	ENSG00000172493.23	transcript	ENST00000395146.9	protein_coding	2/20		INFO_REALIGN_3_PRIME	chr4	TogoVar
AFF1_chr4_86930011_87146039	86998098	CAAAAAAA others(3): Show CAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG01978.hp2 NA18985.hp2 HG01978.hp2 NA18985.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0018 a0001c0001t0003 a0001c0001t0018	a0001c0001t0003g0065 a0001c0001t0018g0060 a0001c0001t0003g0065 a0001c0001t0018g0060	2	294	0.0068	-10	c.39- others(27): Show c.39-48048_39-48039delAAAAAAAAAA	AFF1	ENSG00000172493.23	transcript	ENST00000395146.9	protein_coding	2/20		INFO_REALIGN_3_PRIME	chr4	TogoVar
AFF1_chr4_86930011_87146039	87000605	CTGTGTGT others(3): Show CTGTGTGTGTG	C C	intron_variant intron_variant	MODIFIER	HG02080.hp2 HG02523.hp1 HG02717.hp1 others(2): Show HG02080.hp2 HG02523.hp1 HG02717.hp1 HG02818.hp2 HG03130.hp2	a0001 a0005 a0001 a0005	a0001c0001 a0001c0005 a0005c0032 a0001c0001 a0001c0005 a0005c0032	a0001c0001t0001 a0001c0001t0003 a0001c0005t0043 others(2): Show a0001c0001t0001 a0001c0001t0003 a0001c0005t0043 a0001c0005t0053 a0005c0032t0011	a0001c0001t0001g0161 a0001c0001t0003g0079 a0001c0005t0043g0173 others(2): Show a0001c0001t0001g0161 a0001c0001t0003g0079 a0001c0005t0043g0173 a0001c0005t0053g0174 a0005c0032t0011g0103	5	294	0.0170	-10	c.39- others(27): Show c.39-45534_39-45525delTGTGTGTGTG	AFF1	ENSG00000172493.23	transcript	ENST00000395146.9	protein_coding	2/20		INFO_REALIGN_3_PRIME	chr4	TogoVar
AFF1_chr4_86930011_87146039	87022543	GATATATA others(3): Show GATATATATAT	G G	intron_variant intron_variant	MODIFIER	HG01109.hp2 HG01884.hp1 HG01891.hp2 others(16): Show HG01109.hp2 HG01884.hp1 HG01891.hp2 HG02258.hp1 HG02451.hp2 HG02572.hp1 HG02572.hp2 HG02809.hp2 HG02818.hp1 HG02922.hp2 HG03041.hp2 HG03209.hp1 HG03516.hp2 HG03579.hp1 HG06807.hp1 NA18522.hp1 NA18522.hp2 NA18906.hp2 NA21309.hp2	a0001 a0002 a0010 a0001 a0002 a0010	a0001c0001 a0001c0002 a0002c0008 others(1): Show a0001c0001 a0001c0002 a0002c0008 a0010c0015	a0001c0001t0003 a0001c0001t0008 a0001c0001t0015 others(7): Show a0001c0001t0003 a0001c0001t0008 a0001c0001t0015 a0001c0001t0045 a0001c0002t0005 a0001c0002t0044 a0001c0002t0056 a0002c0008t0021 a0002c0008t0042 a0010c0015t0055	a0001c0001t0003g0192 a0001c0001t0008g0115 a0001c0001t0015g0114 others(16): Show a0001c0001t0003g0192 a0001c0001t0008g0115 a0001c0001t0015g0114 a0001c0001t0045g0093 a0001c0002t0005g0117 a0001c0002t0005g0185 a0001c0002t0005g0193 a0001c0002t0005g0194 a0001c0002t0005g0196 a0001c0002t0005g0197 a0001c0002t0005g0198 a0001c0002t0005g0199 a0001c0002t0005g0249 a0001c0002t0044g0195 a0001c0002t0056g0200 a0002c0008t0021g0014 a0002c0008t0021g0016 a0002c0008t0042g0015 a0010c0015t0055g0012	19	294	0.0646	-10	c.39- others(27): Show c.39-23592_39-23583delATATATATAT	AFF1	ENSG00000172493.23	transcript	ENST00000395146.9	protein_coding	2/20		INFO_REALIGN_3_PRIME	chr4	TogoVar
AFF1_chr4_86930011_87146039	87063228	CTTTTTTT others(3): Show CTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG02040.hp1 HG02486.hp1 HG02523.hp2 others(3): Show HG02040.hp1 HG02486.hp1 HG02523.hp2 HG03139.hp2 NA18977.hp2 NA19060.hp1	a0001 a0001	a0001c0001 a0001c0003 a0001c0001 a0001c0003	a0001c0001t0004 a0001c0001t0028 a0001c0003t0028 a0001c0001t0004 a0001c0001t0028 a0001c0003t0028	a0001c0001t0004g0035 a0001c0001t0004g0209 a0001c0001t0004g0222 others(3): Show a0001c0001t0004g0035 a0001c0001t0004g0209 a0001c0001t0004g0222 a0001c0001t0004g0238 a0001c0001t0028g0257 a0001c0003t0028g0286	6	294	0.0204	-10	c.105 others(31): Show c.1059+15653_1059+15662delTTTTTTTTTT	AFF1	ENSG00000172493.23	transcript	ENST00000395146.9	protein_coding	4/20		INFO_REALIGN_3_PRIME	chr4	TogoVar
AFF1_chr4_86930011_87146039	87073280	CAAAAAAA others(3): Show CAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG01109.hp2 HG02622.hp2 HG02897.hp2 others(6): Show HG01109.hp2 HG02622.hp2 HG02897.hp2 HG02965.hp1 HG03130.hp2 HG03139.hp1 HG03516.hp2 HG03540.hp1 NA18906.hp1	a0001 a0005 a0001 a0005	a0001c0001 a0001c0002 a0005c0032 a0001c0001 a0001c0002 a0005c0032	a0001c0001t0011 a0001c0001t0015 a0001c0001t0017 others(3): Show a0001c0001t0011 a0001c0001t0015 a0001c0001t0017 a0001c0002t0049 a0001c0002t0056 a0005c0032t0011	a0001c0001t0011g0094 a0001c0001t0011g0240 a0001c0001t0011g0265 others(6): Show a0001c0001t0011g0094 a0001c0001t0011g0240 a0001c0001t0011g0265 a0001c0001t0011g0266 a0001c0001t0015g0114 a0001c0001t0017g0096 a0001c0002t0049g0258 a0001c0002t0056g0200 a0005c0032t0011g0103	9	294	0.0306	-10	c.106 others(31): Show c.1060-10815_1060-10806delAAAAAAAAAA	AFF1	ENSG00000172493.23	transcript	ENST00000395146.9	protein_coding	4/20		INFO_REALIGN_3_PRIME	chr4	TogoVar
AFF1_chr4_86930011_87146039	87073992	CATGTGTG others(3): Show CATGTGTGTGT	C C	intron_variant intron_variant	MODIFIER	HG02451.hp1 HG02486.hp1 HG02559.hp2 others(10): Show HG02451.hp1 HG02486.hp1 HG02559.hp2 HG02572.hp2 HG02809.hp2 HG02922.hp1 HG02970.hp2 HG02976.hp2 HG03139.hp2 NA18522.hp1 NA18906.hp2 NA20129.hp1 NA21309.hp1	a0001 a0002 a0007 others(1): Show a0001 a0002 a0007 a0017	a0001c0001 a0001c0003 a0001c0016 others(3): Show a0001c0001 a0001c0003 a0001c0016 a0002c0008 a0007c0029 a0017c0026	a0001c0001t0028 a0001c0001t0045 a0001c0001t0050 others(8): Show a0001c0001t0028 a0001c0001t0045 a0001c0001t0050 a0001c0003t0027 a0001c0003t0028 a0001c0003t0067 a0001c0016t0069 a0002c0008t0021 a0002c0008t0042 a0007c0029t0038 a0017c0026t0036	a0001c0001t0028g0257 a0001c0001t0045g0093 a0001c0001t0050g0241 others(10): Show a0001c0001t0028g0257 a0001c0001t0045g0093 a0001c0001t0050g0241 a0001c0003t0027g0186 a0001c0003t0027g0188 a0001c0003t0028g0286 a0001c0003t0067g0187 a0001c0016t0069g0088 a0002c0008t0021g0014 a0002c0008t0021g0016 a0002c0008t0042g0015 a0007c0029t0038g0001 a0017c0026t0036g0260	13	294	0.0442	-10	c.106 others(31): Show c.1060-10126_1060-10117delTGTGTGTGTA	AFF1	ENSG00000172493.23	transcript	ENST00000395146.9	protein_coding	4/20		INFO_REALIGN_3_PRIME	chr4	TogoVar
AFF1_chr4_86930011_87146039	87085336	GTTTTGTG others(3): Show GTTTTGTGTAT	G G	intron_variant intron_variant	MODIFIER	HG00639.hp2 HG00639.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0015 a0001c0001t0015	a0001c0001t0015g0259 a0001c0001t0015g0259	1	294	0.0034	-10	c.110 others(29): Show c.1104+1177_1104+1186delGTGTATTTTT	AFF1	ENSG00000172493.23	transcript	ENST00000395146.9	protein_coding	5/20		INFO_REALIGN_3_PRIME	chr4	TogoVar
AFF1_chr4_86930011_87146039	87110441	TTTTTGTT others(3): Show TTTTTGTTTTG	T T	intron_variant intron_variant	MODIFIER	HG00140.hp1 HG00280.hp1 HG00280.hp2 others(141): Show HG00140.hp1 HG00280.hp1 HG00280.hp2 HG00323.hp1 HG00558.hp1 HG00621.hp1 HG00639.hp1 HG00639.hp2 HG00738.hp2 HG00741.hp1 HG01069.hp1 HG01071.hp1 HG01071.hp2 HG01074.hp2 HG01099.hp2 HG01168.hp1 HG01169.hp2 HG01175.hp2 HG01192.hp2 HG01243.hp2 HG01256.hp1 HG01361.hp2 HG01433.hp1 HG01433.hp2 HG01496.hp2 HG01516.hp1 HG01517.hp1 HG01517.hp2 HG01884.hp1 HG01884.hp2 HG01981.hp2 HG01993.hp2 HG02015.hp1 HG02040.hp2 HG02055.hp1 HG02055.hp2 HG02056.hp2 HG02071.hp1 HG02071.hp2 HG02080.hp1 HG02083.hp1 HG02083.hp2 HG02109.hp1 HG02129.hp1 HG02132.hp2 HG02135.hp1 HG02145.hp2 HG02148.hp1 HG02257.hp1 HG02257.hp2 HG02273.hp2 HG02486.hp2 HG02523.hp1 HG02559.hp1 HG02622.hp2 HG02647.hp1 HG02647.hp2 HG02717.hp1 HG02723.hp1 HG02738.hp2 HG02809.hp1 HG02809.hp2 HG02818.hp2 HG02895.hp2 HG02896.hp1 HG02897.hp1 HG02897.hp2 HG02922.hp1 HG02965.hp1 HG02970.hp1 HG02976.hp1 HG03041.hp1 HG03098.hp1 HG03098.hp2 HG03130.hp1 HG03130.hp2 HG03139.hp1 HG03225.hp2 HG03239.hp1 HG03239.hp2 HG03516.hp2 HG03540.hp1 HG03579.hp2 HG03704.hp1 HG03834.hp1 HG03834.hp2 HG03942.hp2 HG04115.hp1 HG04184.hp2 HG04204.hp1 HG04228.hp1 NA18612.hp2 NA18747.hp1 NA18940.hp2 NA18944.hp1 NA18944.hp2 NA18948.hp1 NA18951.hp2 NA18953.hp1 NA18953.hp2 NA18959.hp1 NA18959.hp2 NA18960.hp1 NA18961.hp2 NA18968.hp2 NA18970.hp1 NA18970.hp2 NA18981.hp1 NA18981.hp2 NA18985.hp1 NA18988.hp1 NA18992.hp2 NA18994.hp1 NA18998.hp1 NA19001.hp1 NA19001.hp2 NA19009.hp2 NA19011.hp2 NA19043.hp1 NA19055.hp1 NA19056.hp1 NA19057.hp2 NA19058.hp2 NA19060.hp2 NA19066.hp2 NA19070.hp1 NA19077.hp2 NA19081.hp1 NA19083.hp2 NA19085.hp1 NA19085.hp2 NA19087.hp2 NA19088.hp1 NA19088.hp2 NA19240.hp2 NA20129.hp1 NA20300.hp1 NA20300.hp2 NA20752.hp1 NA20752.hp2 NA20805.hp2 NA20905.hp2 NA21309.hp1 homoSapiens_chm13v2.hp1	a0001 a0005 a0009 others(3): Show a0001 a0005 a0009 a0016 a0017 a0018	a0001c0001 a0001c0003 a0001c0005 others(11): Show a0001c0001 a0001c0003 a0001c0005 a0001c0006 a0001c0007 a0001c0010 a0001c0011 a0001c0016 a0001c0028 a0005c0032 a0009c0024 a0016c0023 a0017c0026 a0018c0013	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(40): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0006 a0001c0001t0008 a0001c0001t0011 a0001c0001t0012 a0001c0001t0014 a0001c0001t0015 a0001c0001t0016 a0001c0001t0017 a0001c0001t0018 a0001c0001t0019 a0001c0001t0024 a0001c0001t0031 a0001c0001t0032 a0001c0001t0035 a0001c0001t0039 a0001c0001t0040 a0001c0001t0045 a0001c0001t0047 a0001c0001t0048 a0001c0001t0050 a0001c0001t0057 a0001c0001t0059 a0001c0003t0020 a0001c0003t0062 a0001c0003t0066 a0001c0005t0041 a0001c0005t0043 a0001c0005t0053 a0001c0006t0008 a0001c0007t0008 a0001c0010t0006 a0001c0010t0054 a0001c0011t0008 a0001c0016t0069 a0001c0028t0002 a0005c0032t0011 a0009c0024t0001 a0016c0023t0015 a0017c0026t0036 a0018c0013t0070	a0001c0001t0001g0031 a0001c0001t0001g0034 a0001c0001t0001g0042 others(141): Show a0001c0001t0001g0031 a0001c0001t0001g0034 a0001c0001t0001g0042 a0001c0001t0001g0046 a0001c0001t0001g0077 a0001c0001t0001g0090 a0001c0001t0001g0119 a0001c0001t0001g0120 a0001c0001t0001g0124 a0001c0001t0001g0125 a0001c0001t0001g0132 a0001c0001t0001g0138 a0001c0001t0001g0139 a0001c0001t0001g0140 a0001c0001t0001g0141 a0001c0001t0001g0142 a0001c0001t0001g0143 a0001c0001t0001g0144 a0001c0001t0001g0146 a0001c0001t0001g0147 a0001c0001t0001g0149 a0001c0001t0001g0151 a0001c0001t0001g0152 a0001c0001t0001g0153 a0001c0001t0001g0154 a0001c0001t0001g0156 a0001c0001t0001g0157 a0001c0001t0001g0158 a0001c0001t0001g0161 a0001c0001t0001g0163 a0001c0001t0001g0165 a0001c0001t0001g0166 a0001c0001t0001g0167 a0001c0001t0001g0168 a0001c0001t0001g0169 a0001c0001t0001g0170 a0001c0001t0001g0176 a0001c0001t0001g0177 a0001c0001t0001g0221 a0001c0001t0001g0292 a0001c0001t0002g0013 a0001c0001t0002g0018 a0001c0001t0002g0021 a0001c0001t0002g0022 a0001c0001t0002g0024 a0001c0001t0002g0025 a0001c0001t0002g0036 a0001c0001t0002g0037 a0001c0001t0002g0040 a0001c0001t0002g0041 a0001c0001t0002g0047 a0001c0001t0002g0048 a0001c0001t0002g0049 a0001c0001t0002g0050 a0001c0001t0002g0051 a0001c0001t0002g0052 a0001c0001t0002g0054 a0001c0001t0002g0059 a0001c0001t0002g0062 a0001c0001t0002g0068 a0001c0001t0002g0070 a0001c0001t0002g0071 a0001c0001t0002g0072 a0001c0001t0002g0089 a0001c0001t0002g0160 a0001c0001t0002g0189 a0001c0001t0002g0191 a0001c0001t0002g0201 a0001c0001t0002g0205 a0001c0001t0002g0226 a0001c0001t0002g0248 a0001c0001t0002g0255 a0001c0001t0002g0263 a0001c0001t0002g0283 a0001c0001t0002g0285 a0001c0001t0003g0239 a0001c0001t0006g0073 a0001c0001t0006g0074 a0001c0001t0006g0075 a0001c0001t0006g0076 a0001c0001t0006g0078 a0001c0001t0006g0086 a0001c0001t0006g0106 a0001c0001t0006g0107 a0001c0001t0008g0112 a0001c0001t0008g0115 a0001c0001t0011g0094 a0001c0001t0011g0240 a0001c0001t0011g0265 a0001c0001t0011g0266 a0001c0001t0011g0267 a0001c0001t0012g0056 a0001c0001t0012g0127 a0001c0001t0012g0128 a0001c0001t0012g0135 a0001c0001t0014g0126 a0001c0001t0014g0136 a0001c0001t0014g0137 a0001c0001t0015g0114 a0001c0001t0015g0259 a0001c0001t0016g0098 a0001c0001t0016g0099 a0001c0001t0016g0100 a0001c0001t0017g0095 a0001c0001t0017g0096 a0001c0001t0017g0101 a0001c0001t0018g0023 a0001c0001t0019g0247 a0001c0001t0019g0262 a0001c0001t0024g0080 a0001c0001t0031g0129 a0001c0001t0031g0131 a0001c0001t0032g0092 a0001c0001t0035g0264 a0001c0001t0039g0026 a0001c0001t0040g0055 a0001c0001t0045g0093 a0001c0001t0047g0148 a0001c0001t0048g0134 a0001c0001t0050g0241 a0001c0001t0057g0102 a0001c0001t0059g0130 a0001c0003t0020g0178 a0001c0003t0020g0183 a0001c0003t0062g0182 a0001c0003t0066g0207 a0001c0005t0041g0175 a0001c0005t0043g0173 a0001c0005t0053g0174 a0001c0006t0008g0184 a0001c0007t0008g0210 a0001c0007t0008g0211 a0001c0007t0008g0237 a0001c0010t0006g0083 a0001c0010t0054g0084 a0001c0011t0008g0110 a0001c0011t0008g0261 a0001c0016t0069g0088 a0001c0028t0002g0038 a0005c0032t0011g0103 a0009c0024t0001g0150 a0016c0023t0015g0113 a0017c0026t0036g0260 a0018c0013t0070g0010	144	294	0.4898	-10	c.153 others(29): Show c.1533+2164_1533+2173delTTGTTTTGTT	AFF1	ENSG00000172493.23	transcript	ENST00000395146.9	protein_coding	11/20		INFO_REALIGN_3_PRIME	chr4	TogoVar
AFF2_chrX_148495617_149005663	148521402	ACACACAC others(3): Show ACACACACACT	A A	intron_variant intron_variant	MODIFIER	NA20905.hp1 NA20905.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0096 a0001c0001t0096	a0001c0001t0096g0146 a0001c0001t0096g0146	1	169	0.0059	-10	c.47+ others(27): Show c.47+20262_47+20271delACACACTCAC	AFF2	ENSG00000155966.14	transcript	ENST00000370460.7	protein_coding	1/20		INFO_REALIGN_3_PRIME	chrX	TogoVar
AFF2_chrX_148495617_149005663	148524121	CTCTGTGT others(3): Show CTCTGTGTGTG	C C	intron_variant intron_variant	MODIFIER	NA19240.hp2 NA19240.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0038 a0001c0001t0038	a0001c0001t0038g0102 a0001c0001t0038g0102	1	169	0.0059	-10	c.47+ others(27): Show c.47+22979_47+22988delCTGTGTGTGT	AFF2	ENSG00000155966.14	transcript	ENST00000370460.7	protein_coding	1/20		INFO_REALIGN_3_PRIME	chrX	TogoVar
AFF2_chrX_148495617_149005663	148574943	GGTGTGTG others(3): Show GGTGTGTGTGT	G G	intron_variant intron_variant	MODIFIER	HG00280.hp1 HG00639.hp1 HG00738.hp1 others(31): Show HG00280.hp1 HG00639.hp1 HG00738.hp1 HG01069.hp1 HG01243.hp1 HG01358.hp1 HG01515.hp1 HG01884.hp1 HG01891.hp1 HG01934.hp1 HG02280.hp1 HG02451.hp1 HG02451.hp2 HG02572.hp1 HG02615.hp2 HG02622.hp1 HG02630.hp1 HG02647.hp1 HG02818.hp1 HG02886.hp1 HG02896.hp2 HG02965.hp1 HG02976.hp2 HG03041.hp1 HG03098.hp1 HG03139.hp1 HG03492.hp1 HG03540.hp1 HG03540.hp2 HG06807.hp2 NA18522.hp1 NA19240.hp1 NA19240.hp2 NA20129.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0003 others(2): Show a0001c0001 a0001c0002 a0001c0003 a0001c0004 a0001c0005	a0001c0001t0006 a0001c0001t0010 a0001c0001t0011 others(26): Show a0001c0001t0006 a0001c0001t0010 a0001c0001t0011 a0001c0001t0016 a0001c0001t0017 a0001c0001t0038 a0001c0001t0044 a0001c0001t0066 a0001c0001t0076 a0001c0001t0098 a0001c0001t0099 a0001c0001t0117 a0001c0002t0009 a0001c0002t0018 a0001c0002t0019 a0001c0002t0020 a0001c0002t0034 a0001c0002t0054 a0001c0002t0078 a0001c0002t0082 a0001c0002t0087 a0001c0002t0094 a0001c0002t0101 a0001c0003t0026 a0001c0003t0030 a0001c0003t0112 a0001c0004t0075 a0001c0004t0113 a0001c0005t0023	a0001c0001t0006g0138 a0001c0001t0006g0144 a0001c0001t0006g0163 others(31): Show a0001c0001t0006g0138 a0001c0001t0006g0144 a0001c0001t0006g0163 a0001c0001t0010g0115 a0001c0001t0010g0116 a0001c0001t0011g0128 a0001c0001t0016g0154 a0001c0001t0016g0155 a0001c0001t0017g0145 a0001c0001t0038g0102 a0001c0001t0044g0127 a0001c0001t0066g0015 a0001c0001t0076g0153 a0001c0001t0098g0119 a0001c0001t0099g0141 a0001c0001t0117g0164 a0001c0002t0009g0126 a0001c0002t0018g0151 a0001c0002t0018g0156 a0001c0002t0019g0123 a0001c0002t0020g0132 a0001c0002t0034g0077 a0001c0002t0054g0133 a0001c0002t0078g0152 a0001c0002t0082g0016 a0001c0002t0087g0147 a0001c0002t0094g0106 a0001c0002t0101g0160 a0001c0003t0026g0157 a0001c0003t0030g0158 a0001c0003t0112g0130 a0001c0004t0075g0004 a0001c0004t0113g0159 a0001c0005t0023g0125	34	169	0.2012	-10	c.47+ others(27): Show c.47+73833_47+73842delTGTGTGTGTG	AFF2	ENSG00000155966.14	transcript	ENST00000370460.7	protein_coding	1/20		INFO_REALIGN_3_PRIME	chrX	TogoVar
AFF2_chrX_148495617_149005663	148581271	CATATACA others(3): Show CATATACACGT	C C	intron_variant intron_variant	MODIFIER	HG02886.hp2 HG03130.hp1 NA20129.hp2 HG02886.hp2 HG03130.hp1 NA20129.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0006 a0001c0002t0022 a0001c0002t0108 a0001c0001t0006 a0001c0002t0022 a0001c0002t0108	a0001c0001t0006g0120 a0001c0002t0022g0003 a0001c0002t0108g0002 a0001c0001t0006g0120 a0001c0002t0022g0003 a0001c0002t0108g0002	3	169	0.0178	-10	c.48- others(27): Show c.48-70721_48-70712delACGTATATAC	AFF2	ENSG00000155966.14	transcript	ENST00000370460.7	protein_coding	1/20		INFO_REALIGN_3_PRIME	chrX	TogoVar
AFF2_chrX_148495617_149005663	148581279	CGTATATA others(3): Show CGTATATACGT	C C	intron_variant intron_variant	MODIFIER	HG03209.hp1 HG03209.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0111 a0001c0002t0111	a0001c0002t0111g0096 a0001c0002t0111g0096	1	169	0.0059	-10	c.48- others(27): Show c.48-70719_48-70710delGTATATACGT	AFF2	ENSG00000155966.14	transcript	ENST00000370460.7	protein_coding	1/20			chrX	TogoVar
AFF2_chrX_148495617_149005663	148614786	CTTTCTTC others(3): Show CTTTCTTCCTT	C C	intron_variant intron_variant	MODIFIER	HG01106.hp1 HG01106.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0083 a0001c0001t0083	a0001c0001t0083g0024 a0001c0001t0083g0024	1	169	0.0059	-10	c.48- others(27): Show c.48-37211_48-37202delTTCTTCCTTT	AFF2	ENSG00000155966.14	transcript	ENST00000370460.7	protein_coding	1/20		INFO_REALIGN_3_PRIME	chrX	TogoVar
AFF2_chrX_148495617_149005663	148623600	AATATATA others(3): Show AATATATATAT	A A	intron_variant intron_variant	MODIFIER	HG01106.hp1 HG01106.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0083 a0001c0001t0083	a0001c0001t0083g0024 a0001c0001t0083g0024	1	169	0.0059	-10	c.48- others(27): Show c.48-28388_48-28379delATATATATAT	AFF2	ENSG00000155966.14	transcript	ENST00000370460.7	protein_coding	1/20		INFO_REALIGN_3_PRIME	chrX	TogoVar
AFF2_chrX_148495617_149005663	148701011	AATGTGTG others(3): Show AATGTGTGTGT	A A	intron_variant intron_variant	MODIFIER	HG01891.hp2 HG01891.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0110 a0001c0001t0110	a0001c0001t0110g0118 a0001c0001t0110g0118	1	169	0.0059	-10	c.104 others(31): Show c.1041+38244_1041+38253delATGTGTGTGT	AFF2	ENSG00000155966.14	transcript	ENST00000370460.7	protein_coding	3/20			chrX	TogoVar
AFF2_chrX_148495617_149005663	148897263	ATATATAT others(3): Show ATATATATATG	A A	intron_variant intron_variant	MODIFIER	HG01258.hp1 HG01884.hp1 HG01943.hp1 others(12): Show HG01258.hp1 HG01884.hp1 HG01943.hp1 HG02257.hp1 HG02630.hp2 HG03225.hp1 HG03579.hp1 HG06807.hp1 NA18612.hp1 NA18952.hp1 NA18967.hp1 NA19043.hp1 NA19070.hp1 NA19082.hp1 NA20905.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0003 a0001c0001 a0001c0002 a0001c0003	a0001c0001t0008 a0001c0001t0011 a0001c0001t0021 others(12): Show a0001c0001t0008 a0001c0001t0011 a0001c0001t0021 a0001c0001t0039 a0001c0001t0042 a0001c0001t0051 a0001c0001t0096 a0001c0001t0116 a0001c0001t0120 a0001c0001t0123 a0001c0002t0029 a0001c0002t0047 a0001c0002t0107 a0001c0003t0028 a0001c0003t0030	a0001c0001t0008g0059 a0001c0001t0011g0112 a0001c0001t0021g0103 others(12): Show a0001c0001t0008g0059 a0001c0001t0011g0112 a0001c0001t0021g0103 a0001c0001t0039g0101 a0001c0001t0042g0012 a0001c0001t0051g0069 a0001c0001t0096g0146 a0001c0001t0116g0075 a0001c0001t0120g0035 a0001c0001t0123g0090 a0001c0002t0029g0149 a0001c0002t0047g0108 a0001c0002t0107g0131 a0001c0003t0028g0005 a0001c0003t0030g0158	15	169	0.0888	-10	c.136 others(29): Show c.1360-6952_1360-6943delATATGTATAT	AFF2	ENSG00000155966.14	transcript	ENST00000370460.7	protein_coding	8/20		INFO_REALIGN_3_PRIME	chrX	TogoVar
AFF2_chrX_148495617_149005663	148916196	CTTTTTTT others(3): Show CTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG02145.hp1 HG02145.hp1	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0109 a0001c0003t0109	a0001c0003t0109g0122 a0001c0003t0109g0122	1	169	0.0059	-10	c.139 others(31): Show c.1397+11960_1397+11969delTTTTTTTTTT	AFF2	ENSG00000155966.14	transcript	ENST00000370460.7	protein_coding	9/20		INFO_REALIGN_3_PRIME	chrX	TogoVar
AFF2_chrX_148495617_149005663	148977614	GACACACA others(3): Show GACACACACAC	G G	intron_variant intron_variant	MODIFIER	HG00140.hp1 HG00280.hp1 HG00621.hp1 others(86): Show HG00140.hp1 HG00280.hp1 HG00621.hp1 HG00642.hp1 HG00673.hp1 HG01069.hp1 HG01074.hp1 HG01099.hp1 HG01106.hp1 HG01167.hp1 HG01256.hp1 HG01261.hp1 HG01515.hp1 HG01952.hp1 HG01978.hp1 HG02015.hp1 HG02040.hp1 HG02071.hp1 HG02074.hp1 HG02083.hp1 HG02129.hp1 HG02132.hp1 HG02135.hp1 HG02257.hp1 HG02602.hp1 HG02735.hp1 HG02738.hp1 HG02809.hp2 HG02886.hp2 HG03017.hp1 HG03492.hp1 HG03579.hp1 HG03654.hp1 HG03688.hp1 HG03942.hp1 HG04115.hp1 HG04199.hp1 HG04228.hp1 NA18747.hp1 NA18940.hp1 NA18943.hp1 NA18944.hp1 NA18945.hp1 NA18952.hp1 NA18953.hp1 NA18959.hp1 NA18960.hp1 NA18961.hp1 NA18962.hp1 NA18965.hp1 NA18966.hp1 NA18970.hp1 NA18971.hp1 NA18974.hp1 NA18977.hp1 NA18982.hp1 NA18983.hp1 NA18984.hp1 NA18986.hp1 NA18988.hp1 NA18989.hp1 NA18990.hp1 NA18994.hp1 NA18995.hp1 NA19000.hp1 NA19004.hp1 NA19005.hp1 NA19007.hp1 NA19009.hp1 NA19012.hp1 NA19056.hp1 NA19058.hp1 NA19060.hp1 NA19062.hp1 NA19063.hp1 NA19066.hp1 NA19068.hp1 NA19070.hp1 NA19082.hp1 NA19083.hp1 NA19085.hp1 NA19086.hp1 NA19088.hp1 NA19091.hp1 NA20300.hp1 NA20752.hp1 NA20805.hp1 NA20905.hp1 homoSapiens_chm13v2.hp1	a0001 a0002 a0003 others(1): Show a0001 a0002 a0003 a0004	a0001c0001 a0001c0002 a0002c0009 others(2): Show a0001c0001 a0001c0002 a0002c0009 a0003c0008 a0004c0006	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(56): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0005 a0001c0001t0006 a0001c0001t0007 a0001c0001t0009 a0001c0001t0011 a0001c0001t0012 a0001c0001t0013 a0001c0001t0014 a0001c0001t0015 a0001c0001t0017 a0001c0001t0024 a0001c0001t0033 a0001c0001t0036 a0001c0001t0039 a0001c0001t0041 a0001c0001t0043 a0001c0001t0048 a0001c0001t0049 a0001c0001t0053 a0001c0001t0055 a0001c0001t0056 a0001c0001t0057 a0001c0001t0058 a0001c0001t0059 a0001c0001t0060 a0001c0001t0063 a0001c0001t0064 a0001c0001t0065 a0001c0001t0067 a0001c0001t0068 a0001c0001t0069 a0001c0001t0070 a0001c0001t0073 a0001c0001t0074 a0001c0001t0077 a0001c0001t0081 a0001c0001t0083 a0001c0001t0084 a0001c0001t0085 a0001c0001t0086 a0001c0001t0096 a0001c0001t0099 a0001c0001t0100 a0001c0001t0114 a0001c0001t0115 a0001c0001t0116 a0001c0001t0118 a0001c0001t0120 a0001c0001t0121 a0001c0001t0122 a0001c0001t0123 a0001c0002t0040 a0002c0009t0103 a0003c0008t0045 a0004c0006t0012	a0001c0001t0001g0019 a0001c0001t0001g0036 a0001c0001t0001g0039 others(86): Show a0001c0001t0001g0019 a0001c0001t0001g0036 a0001c0001t0001g0039 a0001c0001t0001g0068 a0001c0001t0001g0070 a0001c0001t0001g0076 a0001c0001t0001g0082 a0001c0001t0002g0020 a0001c0001t0002g0029 a0001c0001t0002g0054 a0001c0001t0002g0085 a0001c0001t0002g0166 a0001c0001t0003g0042 a0001c0001t0003g0063 a0001c0001t0003g0065 a0001c0001t0003g0066 a0001c0001t0003g0086 a0001c0001t0004g0041 a0001c0001t0004g0043 a0001c0001t0004g0045 a0001c0001t0004g0100 a0001c0001t0005g0001 a0001c0001t0005g0009 a0001c0001t0005g0021 a0001c0001t0005g0022 a0001c0001t0006g0120 a0001c0001t0006g0138 a0001c0001t0006g0144 a0001c0001t0006g0163 a0001c0001t0007g0038 a0001c0001t0007g0048 a0001c0001t0007g0089 a0001c0001t0009g0142 a0001c0001t0009g0143 a0001c0001t0011g0112 a0001c0001t0012g0168 a0001c0001t0013g0034 a0001c0001t0013g0072 a0001c0001t0014g0055 a0001c0001t0014g0058 a0001c0001t0015g0032 a0001c0001t0015g0060 a0001c0001t0017g0040 a0001c0001t0024g0091 a0001c0001t0024g0093 a0001c0001t0033g0083 a0001c0001t0036g0139 a0001c0001t0039g0101 a0001c0001t0041g0071 a0001c0001t0043g0006 a0001c0001t0048g0013 a0001c0001t0049g0105 a0001c0001t0053g0027 a0001c0001t0055g0025 a0001c0001t0056g0023 a0001c0001t0057g0135 a0001c0001t0058g0097 a0001c0001t0059g0014 a0001c0001t0060g0067 a0001c0001t0063g0053 a0001c0001t0064g0084 a0001c0001t0065g0056 a0001c0001t0067g0057 a0001c0001t0068g0169 a0001c0001t0069g0047 a0001c0001t0070g0044 a0001c0001t0073g0074 a0001c0001t0074g0033 a0001c0001t0077g0095 a0001c0001t0081g0052 a0001c0001t0083g0024 a0001c0001t0084g0030 a0001c0001t0085g0167 a0001c0001t0086g0031 a0001c0001t0096g0146 a0001c0001t0099g0141 a0001c0001t0100g0140 a0001c0001t0114g0079 a0001c0001t0115g0080 a0001c0001t0116g0075 a0001c0001t0118g0088 a0001c0001t0120g0035 a0001c0001t0121g0046 a0001c0001t0122g0092 a0001c0001t0123g0090 a0001c0002t0040g0111 a0002c0009t0103g0050 a0003c0008t0045g0010 a0004c0006t0012g0011	89	169	0.5266	-10	c.340 others(27): Show c.3405-284_3405-275delACACACACAC	AFF2	ENSG00000155966.14	transcript	ENST00000370460.7	protein_coding	16/20		INFO_REALIGN_3_PRIME	chrX	TogoVar
AFF3_chr2_99540419_100147590	99655213	TACACACA others(3): Show TACACACACAC	T T	intron_variant intron_variant	MODIFIER	HG00099.hp2 HG01106.hp2 HG01884.hp1 others(6): Show HG00099.hp2 HG01106.hp2 HG01884.hp1 HG03130.hp1 HG03195.hp1 HG03209.hp2 HG03834.hp2 NA19043.hp2 NA20129.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0001c0003 a0001c0004 others(2): Show a0001c0001 a0001c0003 a0001c0004 a0001c0005 a0002c0002	a0001c0001t0033 a0001c0003t0002 a0001c0004t0004 others(4): Show a0001c0001t0033 a0001c0003t0002 a0001c0004t0004 a0001c0004t0007 a0001c0005t0009 a0002c0002t0002 a0002c0002t0018	a0001c0001t0033g0038 a0001c0003t0002g0064 a0001c0004t0004g0097 others(6): Show a0001c0001t0033g0038 a0001c0003t0002g0064 a0001c0004t0004g0097 a0001c0004t0007g0093 a0001c0004t0007g0095 a0001c0004t0007g0096 a0001c0005t0009g0016 a0002c0002t0002g0021 a0002c0002t0018g0015	9	100	0.0900	-10	c.114 others(29): Show c.1144-5557_1144-5548delGTGTGTGTGT	AFF3	ENSG00000144218.21	transcript	ENST00000672756.2	protein_coding	12/24			chr2	TogoVar
AFF3_chr2_99540419_100147590	99672176	TCTCACAC others(3): Show TCTCACACACA	T T	intron_variant intron_variant	MODIFIER	HG00099.hp1 HG01891.hp1 HG02055.hp1 others(3): Show HG00099.hp1 HG01891.hp1 HG02055.hp1 HG03041.hp2 NA18906.hp2 NA19043.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0005 a0001c0001t0006 a0001c0001t0008 others(2): Show a0001c0001t0005 a0001c0001t0006 a0001c0001t0008 a0001c0001t0010 a0001c0001t0015	a0001c0001t0005g0075 a0001c0001t0006g0024 a0001c0001t0008g0001 others(3): Show a0001c0001t0005g0075 a0001c0001t0006g0024 a0001c0001t0008g0001 a0001c0001t0010g0055 a0001c0001t0010g0057 a0001c0001t0015g0002	6	100	0.0600	-10	c.114 others(27): Show c.1143+352_1143+361delTGTGTGTGAG	AFF3	ENSG00000144218.21	transcript	ENST00000672756.2	protein_coding	12/24			chr2	TogoVar
AFF3_chr2_99540419_100147590	99672178	TCACACAC others(3): Show TCACACACACA	T T	intron_variant intron_variant	MODIFIER	HG01106.hp2 HG01106.hp2	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0002 a0001c0003t0002	a0001c0003t0002g0064 a0001c0003t0002g0064	1	100	0.0100	-10	c.114 others(27): Show c.1143+350_1143+359delTGTGTGTGTG	AFF3	ENSG00000144218.21	transcript	ENST00000672756.2	protein_coding	12/24			chr2	TogoVar
AFF3_chr2_99540419_100147590	99778895	CGCGTGTG others(3): Show CGCGTGTGTGT	C C	intron_variant intron_variant	MODIFIER	HG02055.hp2 HG02922.hp2 HG03130.hp1 others(2): Show HG02055.hp2 HG02922.hp2 HG03130.hp1 NA19043.hp2 NA20129.hp1	a0001 a0001	a0001c0004 a0001c0004	a0001c0004t0005 a0001c0004t0007 a0001c0004t0014 a0001c0004t0005 a0001c0004t0007 a0001c0004t0014	a0001c0004t0005g0094 a0001c0004t0007g0093 a0001c0004t0007g0095 others(2): Show a0001c0004t0005g0094 a0001c0004t0007g0093 a0001c0004t0007g0095 a0001c0004t0007g0096 a0001c0004t0014g0004	5	100	0.0500	-10	c.922 others(29): Show c.922-26604_922-26595delACACACACGC	AFF3	ENSG00000144218.21	transcript	ENST00000672756.2	protein_coding	8/24			chr2	TogoVar
AFF3_chr2_99540419_100147590	99778897	CGTGTGTG others(3): Show CGTGTGTGTGT	C C	intron_variant intron_variant	MODIFIER	HG01884.hp1 HG01891.hp1 HG02647.hp1 others(5): Show HG01884.hp1 HG01891.hp1 HG02647.hp1 HG02895.hp1 HG02922.hp1 HG02965.hp1 HG02970.hp1 HG02970.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0001c0004 a0001c0005 others(1): Show a0001c0001 a0001c0004 a0001c0005 a0002c0002	a0001c0001t0004 a0001c0001t0007 a0001c0001t0008 others(5): Show a0001c0001t0004 a0001c0001t0007 a0001c0001t0008 a0001c0001t0016 a0001c0001t0030 a0001c0004t0029 a0001c0005t0004 a0002c0002t0018	a0001c0001t0004g0082 a0001c0001t0007g0078 a0001c0001t0008g0001 others(5): Show a0001c0001t0004g0082 a0001c0001t0007g0078 a0001c0001t0008g0001 a0001c0001t0016g0003 a0001c0001t0030g0077 a0001c0004t0029g0098 a0001c0005t0004g0086 a0002c0002t0018g0015	8	100	0.0800	-10	c.922 others(29): Show c.922-26606_922-26597delACACACACAC	AFF3	ENSG00000144218.21	transcript	ENST00000672756.2	protein_coding	8/24			chr2	TogoVar
AFF3_chr2_99540419_100147590	99866994	TAATAATA others(3): Show TAATAATAAAA	T T	intron_variant intron_variant	MODIFIER	HG03540.hp1 HG03540.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0004	a0001c0001t0004g0042 a0001c0001t0004g0042	1	100	0.0100	-10	c.874 others(29): Show c.874-29480_874-29471delTTTTATTATT	AFF3	ENSG00000144218.21	transcript	ENST00000672756.2	protein_coding	7/24			chr2	TogoVar
AFF3_chr2_99540419_100147590	99872593	CAAAAATA others(3): Show CAAAAATAAAA	C C	intron_variant intron_variant	MODIFIER	HG01884.hp1 HG02055.hp1 HG02647.hp1 others(4): Show HG01884.hp1 HG02055.hp1 HG02647.hp1 HG02895.hp1 HG02922.hp1 HG02965.hp1 HG02970.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0001c0004 a0001c0005 others(1): Show a0001c0001 a0001c0004 a0001c0005 a0002c0002	a0001c0001t0004 a0001c0001t0005 a0001c0001t0007 others(4): Show a0001c0001t0004 a0001c0001t0005 a0001c0001t0007 a0001c0001t0030 a0001c0004t0029 a0001c0005t0004 a0002c0002t0018	a0001c0001t0004g0082 a0001c0001t0005g0075 a0001c0001t0007g0078 others(4): Show a0001c0001t0004g0082 a0001c0001t0005g0075 a0001c0001t0007g0078 a0001c0001t0030g0077 a0001c0004t0029g0098 a0001c0005t0004g0086 a0002c0002t0018g0015	7	100	0.0700	-10	c.874 others(29): Show c.874-35079_874-35070delTTTTATTTTT	AFF3	ENSG00000144218.21	transcript	ENST00000672756.2	protein_coding	7/24			chr2	TogoVar
AFF3_chr2_99540419_100147590	99896620	CTTTTTTT others(3): Show CTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG01884.hp1 HG01891.hp1 HG02647.hp1 others(7): Show HG01884.hp1 HG01891.hp1 HG02647.hp1 HG02895.hp1 HG02922.hp1 HG02965.hp1 HG02970.hp2 HG03471.hp1 HG03540.hp1 NA20300.hp2	a0001 a0002 a0003 a0001 a0002 a0003	a0001c0001 a0001c0004 a0001c0005 others(3): Show a0001c0001 a0001c0004 a0001c0005 a0001c0008 a0002c0002 a0003c0006	a0001c0001t0004 a0001c0001t0007 a0001c0001t0008 others(6): Show a0001c0001t0004 a0001c0001t0007 a0001c0001t0008 a0001c0001t0016 a0001c0004t0029 a0001c0005t0004 a0001c0008t0005 a0002c0002t0018 a0003c0006t0006	a0001c0001t0004g0042 a0001c0001t0004g0082 a0001c0001t0007g0078 others(7): Show a0001c0001t0004g0042 a0001c0001t0004g0082 a0001c0001t0007g0078 a0001c0001t0008g0001 a0001c0001t0016g0003 a0001c0004t0029g0098 a0001c0005t0004g0086 a0001c0008t0005g0079 a0002c0002t0018g0015 a0003c0006t0006g0052	10	100	0.1000	-10	c.874 others(29): Show c.874-59106_874-59097delAAAAAAAAAA	AFF3	ENSG00000144218.21	transcript	ENST00000672756.2	protein_coding	7/24			chr2	TogoVar
AFF3_chr2_99540419_100147590	99947599	GAAAGATA others(3): Show GAAAGATAGAT	G G	intron_variant intron_variant	MODIFIER	NA20805.hp2 NA20805.hp2	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0002 a0001c0003t0002	a0001c0003t0002g0043 a0001c0003t0002g0043	1	100	0.0100	-10	c.873 others(29): Show c.873+59023_873+59032delATCTATCTTT	AFF3	ENSG00000144218.21	transcript	ENST00000672756.2	protein_coding	7/24			chr2	TogoVar
AFF3_chr2_99540419_100147590	99966689	CAAAAAAA others(3): Show CAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG01884.hp1 HG02055.hp1 HG02258.hp2 others(9): Show HG01884.hp1 HG02055.hp1 HG02258.hp2 HG02895.hp1 HG02922.hp1 HG02970.hp1 HG02976.hp2 HG03130.hp2 HG03209.hp1 HG03471.hp2 HG04199.hp2 NA20300.hp2	a0001 a0002 a0003 a0001 a0002 a0003	a0001c0001 a0001c0008 a0001c0009 others(3): Show a0001c0001 a0001c0008 a0001c0009 a0002c0002 a0002c0007 a0003c0006	a0001c0001t0001 a0001c0001t0004 a0001c0001t0005 others(9): Show a0001c0001t0001 a0001c0001t0004 a0001c0001t0005 a0001c0001t0007 a0001c0001t0025 a0001c0001t0030 a0001c0008t0005 a0001c0009t0021 a0002c0002t0018 a0002c0002t0023 a0002c0007t0008 a0003c0006t0006	a0001c0001t0001g0023 a0001c0001t0004g0082 a0001c0001t0005g0075 others(9): Show a0001c0001t0001g0023 a0001c0001t0004g0082 a0001c0001t0005g0075 a0001c0001t0007g0078 a0001c0001t0025g0053 a0001c0001t0030g0077 a0001c0008t0005g0091 a0001c0009t0021g0013 a0002c0002t0018g0015 a0002c0002t0023g0054 a0002c0007t0008g0007 a0003c0006t0006g0052	12	100	0.1200	-10	c.873 others(29): Show c.873+39933_873+39942delTTTTTTTTTT	AFF3	ENSG00000144218.21	transcript	ENST00000672756.2	protein_coding	7/24			chr2	TogoVar
AFF3_chr2_99540419_100147590	100064095	AAAAAGAA others(3): Show AAAAAGAAAAG	A A	intron_variant intron_variant	MODIFIER	HG01261.hp1 HG01891.hp1 HG02055.hp2 others(16): Show HG01261.hp1 HG01891.hp1 HG02055.hp2 HG02559.hp2 HG02615.hp2 HG02647.hp1 HG02809.hp1 HG02895.hp2 HG02922.hp2 HG02965.hp1 HG02976.hp1 HG03130.hp1 HG03139.hp1 HG03195.hp1 HG03209.hp1 HG03471.hp2 NA18906.hp2 NA19043.hp2 NA20129.hp1	a0001 a0002 a0004 a0001 a0002 a0004	a0001c0001 a0001c0004 a0001c0005 others(4): Show a0001c0001 a0001c0004 a0001c0005 a0001c0009 a0002c0007 a0002c0013 a0004c0010	a0001c0001t0001 a0001c0001t0008 a0001c0001t0015 others(12): Show a0001c0001t0001 a0001c0001t0008 a0001c0001t0015 a0001c0004t0004 a0001c0004t0005 a0001c0004t0007 a0001c0004t0014 a0001c0004t0029 a0001c0005t0004 a0001c0005t0027 a0001c0009t0021 a0002c0007t0001 a0002c0007t0008 a0002c0013t0019 a0004c0010t0005	a0001c0001t0001g0022 a0001c0001t0008g0001 a0001c0001t0015g0002 others(16): Show a0001c0001t0001g0022 a0001c0001t0008g0001 a0001c0001t0015g0002 a0001c0004t0004g0097 a0001c0004t0005g0094 a0001c0004t0007g0093 a0001c0004t0007g0095 a0001c0004t0007g0096 a0001c0004t0014g0004 a0001c0004t0029g0098 a0001c0005t0004g0083 a0001c0005t0004g0086 a0001c0005t0027g0085 a0001c0009t0021g0013 a0002c0007t0001g0060 a0002c0007t0008g0006 a0002c0007t0008g0007 a0002c0013t0019g0014 a0004c0010t0005g0074	19	100	0.1900	-10	c.53+ others(27): Show c.53+40297_53+40306delCTTTTCTTTT	AFF3	ENSG00000144218.21	transcript	ENST00000672756.2	protein_coding	4/24			chr2	TogoVar
AFF3_chr2_99540419_100147590	100087874	GATTAAAG others(3): Show GATTAAAGTAT	G G	intron_variant intron_variant	MODIFIER	HG01071.hp2 HG01081.hp1 HG01106.hp2 others(3): Show HG01071.hp2 HG01081.hp1 HG01106.hp2 HG02523.hp1 HG04228.hp2 NA18971.hp1	a0001 a0002 a0006 a0001 a0002 a0006	a0001c0001 a0001c0003 a0002c0002 others(1): Show a0001c0001 a0001c0003 a0002c0002 a0006c0012	a0001c0001t0003 a0001c0001t0011 a0001c0003t0002 others(3): Show a0001c0001t0003 a0001c0001t0011 a0001c0003t0002 a0002c0002t0002 a0002c0002t0035 a0006c0012t0032	a0001c0001t0003g0084 a0001c0001t0011g0088 a0001c0003t0002g0064 others(3): Show a0001c0001t0003g0084 a0001c0001t0011g0088 a0001c0003t0002g0064 a0002c0002t0002g0031 a0002c0002t0035g0087 a0006c0012t0032g0090	6	100	0.0600	-10	c.53+ others(27): Show c.53+16518_53+16527delATACTTTAAT	AFF3	ENSG00000144218.21	transcript	ENST00000672756.2	protein_coding	4/24			chr2	TogoVar
AFF3_chr2_99540419_100147590	100129382	CTGTGTGT others(3): Show CTGTGTGTGTG	C C	intron_variant intron_variant	MODIFIER	HG01167.hp1 HG01169.hp2 NA20805.hp2 HG01167.hp1 HG01169.hp2 NA20805.hp2	a0001 a0001	a0001c0001 a0001c0003 a0001c0001 a0001c0003	a0001c0001t0002 a0001c0001t0007 a0001c0003t0002 a0001c0001t0002 a0001c0001t0007 a0001c0003t0002	a0001c0001t0002g0045 a0001c0001t0007g0044 a0001c0003t0002g0043 a0001c0001t0002g0045 a0001c0001t0007g0044 a0001c0003t0002g0043	3	100	0.0300	-10	c.-22 others(25): Show c.-227-86_-227-77delCACACACACA	AFF3	ENSG00000144218.21	transcript	ENST00000672756.2	protein_coding	1/24			chr2	TogoVar
AFF3_chr2_99540419_100147590	100137550	CACACACA others(3): Show CACACACACAG	C C	intron_variant intron_variant	MODIFIER	HG02258.hp2 HG02258.hp2	a0001 a0001	a0001c0008 a0001c0008	a0001c0008t0005 a0001c0008t0005	a0001c0008t0005g0091 a0001c0008t0005g0091	1	100	0.0100	-10	c.-22 others(29): Show c.-228+4924_-228+4933delCTGTGTGTGT	AFF3	ENSG00000144218.21	transcript	ENST00000672756.2	protein_coding	1/24			chr2	TogoVar
AFF4_chr5_132870395_132968634	132905649	AAAAACAA others(3): Show AAAAACAAAAC	A A	intron_variant intron_variant	MODIFIER	HG02135.hp1 HG02135.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0128 a0001c0001t0001g0128	1	392	0.0026	-10	c.105 others(29): Show c.1051-1255_1051-1246delGTTTTGTTTT	AFF4	ENSG00000072364.13	transcript	ENST00000265343.10	protein_coding	5/20			chr5	TogoVar
AFF4_chr5_132870395_132968634	132957019	CAAAAAAA others(3): Show CAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	NA18947.hp1 NA18951.hp2 NA18980.hp1 others(3): Show NA18947.hp1 NA18951.hp2 NA18980.hp1 NA18988.hp1 NA18993.hp2 NA19077.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0087 a0001c0001t0001g0088 a0001c0001t0001g0089 others(3): Show a0001c0001t0001g0087 a0001c0001t0001g0088 a0001c0001t0001g0089 a0001c0001t0001g0090 a0001c0001t0001g0158 a0001c0001t0001g0169	6	392	0.0153	-10	c.-5+ others(25): Show c.-5+6230_-5+6239delTTTTTTTTTT	AFF4	ENSG00000072364.13	transcript	ENST00000265343.10	protein_coding	1/20			chr5	TogoVar
AFMID_chr17_78182362_78212702	78186700	GAGGGGAG others(3): Show GAGGGGAGGGA	G G	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03471.hp2 HG03471.hp2	a0004 a0004	a0004c0004 a0004c0004	a0004c0004t0002 a0004c0004t0002	a0004c0004t0002g0005 a0004c0004t0002g0005	1	446	0.0022	-10	c.-67 others(19): Show c.-670_-661delAGGGGAGGGA	AFMID	ENSG00000183077.16	transcript	ENST00000409257.10	protein_coding		661		chr17	TogoVar
AFMID_chr17_78182362_78212702	78193370	CAAAAAAA others(3): Show CAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG00733.hp1 HG01981.hp1 HG02300.hp2 others(1): Show HG00733.hp1 HG01981.hp1 HG02300.hp2 NA18963.hp1	a0001 a0003 a0001 a0003	a0001c0001 a0003c0003 a0001c0001 a0003c0003	a0001c0001t0002 a0001c0001t0003 a0001c0001t0009 others(1): Show a0001c0001t0002 a0001c0001t0003 a0001c0001t0009 a0003c0003t0013	a0001c0001t0002g0252 a0001c0001t0003g0263 a0001c0001t0009g0150 others(1): Show a0001c0001t0002g0252 a0001c0001t0003g0263 a0001c0001t0009g0150 a0003c0003t0013g0262	4	446	0.0090	-10	c.154 others(27): Show c.154+2329_154+2338delAAAAAAAAAA	AFMID	ENSG00000183077.16	transcript	ENST00000409257.10	protein_coding	2/10		INFO_REALIGN_3_PRIME	chr17	TogoVar
AFMID_chr17_78182362_78212702	78206338	CAAAAAAA others(3): Show CAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	NA18945.hp1 NA18945.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0092 a0001c0001t0002g0092	1	446	0.0022	-10	c.885 others(25): Show c.885+301_885+310delAAAAAAAAAA	AFMID	ENSG00000183077.16	transcript	ENST00000409257.10	protein_coding	10/10		INFO_REALIGN_3_PRIME	chr17	TogoVar
AFTPH_chr2_64519328_64598005	64536566	TAAAAAAA others(3): Show TAAAAAAAAAA	T T	intron_variant intron_variant	MODIFIER	HG00558.hp1 NA20129.hp1 HG00558.hp1 NA20129.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0003 a0002c0002t0003	a0002c0002t0003g0280 a0002c0002t0003g0305 a0002c0002t0003g0280 a0002c0002t0003g0305	2	372	0.0054	-10	c.-33 others(29): Show c.-33+11968_-33+11977delAAAAAAAAAA	AFTPH	ENSG00000119844.17	transcript	ENST00000409933.6	protein_coding	1/9		INFO_REALIGN_3_PRIME	chr2	TogoVar
AFTPH_chr2_64519328_64598005	64545570	TAAAAAAA others(3): Show TAAAAAAAAAA	T T	intron_variant intron_variant	MODIFIER	HG00673.hp1 HG01261.hp2 HG01891.hp1 others(3): Show HG00673.hp1 HG01261.hp2 HG01891.hp1 HG02896.hp1 HG03195.hp1 NA19058.hp2	a0001 a0003 a0001 a0003	a0001c0001 a0003c0003 a0001c0001 a0003c0003	a0001c0001t0001 a0001c0001t0007 a0003c0003t0008 a0001c0001t0001 a0001c0001t0007 a0003c0003t0008	a0001c0001t0001g0180 a0001c0001t0001g0242 a0001c0001t0001g0254 others(3): Show a0001c0001t0001g0180 a0001c0001t0001g0242 a0001c0001t0001g0254 a0001c0001t0001g0367 a0001c0001t0007g0251 a0003c0003t0008g0266	6	372	0.0161	-10	c.-32 others(27): Show c.-32-5840_-32-5831delAAAAAAAAAA	AFTPH	ENSG00000119844.17	transcript	ENST00000409933.6	protein_coding	1/9		INFO_REALIGN_3_PRIME	chr2	TogoVar
AFTPH_chr2_64519328_64598005	64549308	CTTTTTTT others(3): Show CTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG01891.hp1 NA18948.hp2 NA19058.hp2 others(1): Show HG01891.hp1 NA18948.hp2 NA19058.hp2 NA20129.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0001 a0001c0001t0007 a0002c0002t0002 a0001c0001t0001 a0001c0001t0007 a0002c0002t0002	a0001c0001t0001g0245 a0001c0001t0001g0367 a0001c0001t0007g0251 others(1): Show a0001c0001t0001g0245 a0001c0001t0001g0367 a0001c0001t0007g0251 a0002c0002t0002g0358	4	372	0.0108	-10	c.-32 others(27): Show c.-32-2114_-32-2105delTTTTTTTTTT	AFTPH	ENSG00000119844.17	transcript	ENST00000409933.6	protein_coding	1/9		INFO_REALIGN_3_PRIME	chr2	TogoVar
AFTPH_chr2_64519328_64598005	64550677	GCACACAC others(3): Show GCACACACACA	G G	intron_variant intron_variant	MODIFIER	HG00558.hp1 HG02109.hp1 HG02717.hp2 others(4): Show HG00558.hp1 HG02109.hp1 HG02717.hp2 NA18522.hp2 NA19030.hp2 NA19240.hp2 NA20129.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0001 a0002c0002t0001 a0002c0002t0002 others(1): Show a0001c0001t0001 a0002c0002t0001 a0002c0002t0002 a0002c0002t0003	a0001c0001t0001g0126 a0002c0002t0001g0316 a0002c0002t0002g0286 others(4): Show a0001c0001t0001g0126 a0002c0002t0001g0316 a0002c0002t0002g0286 a0002c0002t0002g0306 a0002c0002t0002g0333 a0002c0002t0003g0280 a0002c0002t0003g0305	7	372	0.0188	-10	c.-32 others(25): Show c.-32-721_-32-712delCACACACACA	AFTPH	ENSG00000119844.17	transcript	ENST00000409933.6	protein_coding	1/9		INFO_REALIGN_3_PRIME	chr2	TogoVar
AFTPH_chr2_64519328_64598005	64555555	TCACACAC others(3): Show TCACACACACA	T T	intron_variant intron_variant	MODIFIER	HG00323.hp1 NA18962.hp1 HG00323.hp1 NA18962.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0002 a0002c0002t0002	a0002c0002t0002g0353 a0002c0002t0002g0366 a0002c0002t0002g0353 a0002c0002t0002g0366	2	372	0.0054	-10	c.193 others(29): Show c.1935+2181_1935+2190delCACACACACA	AFTPH	ENSG00000119844.17	transcript	ENST00000409933.6	protein_coding	2/9		INFO_REALIGN_3_PRIME	chr2	TogoVar
AFTPH_chr2_64519328_64598005	64575703	ATGTGTGT others(3): Show ATGTGTGTGTG	A A	intron_variant intron_variant	MODIFIER	HG03540.hp2 HG03540.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0014 a0001c0001t0014	a0001c0001t0014g0006 a0001c0001t0014g0006	1	372	0.0027	-10	c.239 others(29): Show c.2394+2665_2394+2674delGTGTGTGTGT	AFTPH	ENSG00000119844.17	transcript	ENST00000409933.6	protein_coding	6/9		INFO_REALIGN_3_PRIME	chr2	TogoVar
AFTPH_chr2_64519328_64598005	64576074	TACACACA others(3): Show TACACACACAC	T T	intron_variant intron_variant	MODIFIER	HG01891.hp1 HG02055.hp1 HG02055.hp2 others(14): Show HG01891.hp1 HG02055.hp1 HG02055.hp2 HG02257.hp1 HG02280.hp2 HG02572.hp2 HG02622.hp2 HG02647.hp2 HG02717.hp1 HG02717.hp2 HG02723.hp2 HG02922.hp2 HG03041.hp2 HG06807.hp2 NA18906.hp1 NA19030.hp2 NA19240.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0002c0010 a0001c0001 a0002c0002 a0002c0010	a0001c0001t0001 a0001c0001t0009 a0002c0002t0001 others(2): Show a0001c0001t0001 a0001c0001t0009 a0002c0002t0001 a0002c0002t0002 a0002c0010t0016	a0001c0001t0001g0367 a0001c0001t0009g0267 a0002c0002t0001g0004 others(13): Show a0001c0001t0001g0367 a0001c0001t0009g0267 a0002c0002t0001g0004 a0002c0002t0001g0312 a0002c0002t0001g0313 a0002c0002t0001g0314 a0002c0002t0001g0315 a0002c0002t0001g0316 a0002c0002t0001g0318 a0002c0002t0001g0319 a0002c0002t0002g0285 a0002c0002t0002g0286 a0002c0002t0002g0306 a0002c0002t0002g0307 a0002c0002t0002g0365 a0002c0010t0016g0317	17	372	0.0457	-10	c.239 others(29): Show c.2394+3041_2394+3050delACACACACAC	AFTPH	ENSG00000119844.17	transcript	ENST00000409933.6	protein_coding	6/9		INFO_REALIGN_3_PRIME	chr2	TogoVar
AGAP1_chr2_235489043_236136793	235489345	TCACACAC others(3): Show TCACACACACA	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01192.hp1 HG02109.hp2 HG02145.hp1 others(5): Show HG01192.hp1 HG02109.hp2 HG02145.hp1 HG02630.hp2 HG03098.hp2 NA19011.hp2 NA19030.hp2 NA20129.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0005 others(4): Show a0001c0001 a0001c0002 a0001c0005 a0001c0006 a0001c0008 a0001c0011 a0001c0018	a0001c0001t0011 a0001c0002t0001 a0001c0005t0040 others(5): Show a0001c0001t0011 a0001c0002t0001 a0001c0005t0040 a0001c0006t0001 a0001c0006t0037 a0001c0008t0028 a0001c0011t0036 a0001c0018t0049	a0001c0001t0011g0020 a0001c0002t0001g0013 a0001c0005t0040g0006 others(5): Show a0001c0001t0011g0020 a0001c0002t0001g0013 a0001c0005t0040g0006 a0001c0006t0001g0016 a0001c0006t0037g0021 a0001c0008t0028g0029 a0001c0011t0036g0009 a0001c0018t0049g0080	8	98	0.0816	-10	c.-53 others(21): Show c.-5341_-5332delCACACACACA	AGAP1	ENSG00000157985.20	transcript	ENST00000304032.13	protein_coding		4697		chr2	TogoVar
AGAP1_chr2_235489043_236136793	235536627	TCACACAC others(3): Show TCACACACACA	T T	intron_variant intron_variant	MODIFIER	HG01496.hp2 HG02572.hp1 HG02572.hp2 others(2): Show HG01496.hp2 HG02572.hp1 HG02572.hp2 HG02622.hp2 HG02630.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0005 others(1): Show a0001c0001 a0001c0002 a0001c0005 a0001c0011	a0001c0001t0002 a0001c0002t0043 a0001c0005t0004 others(2): Show a0001c0001t0002 a0001c0002t0043 a0001c0005t0004 a0001c0005t0013 a0001c0011t0036	a0001c0001t0002g0060 a0001c0002t0043g0064 a0001c0005t0004g0097 others(2): Show a0001c0001t0002g0060 a0001c0002t0043g0064 a0001c0005t0004g0097 a0001c0005t0013g0050 a0001c0011t0036g0009	5	98	0.0510	-10	c.163 others(29): Show c.163+41820_163+41829delACACACACAC	AGAP1	ENSG00000157985.20	transcript	ENST00000304032.13	protein_coding	1/17		INFO_REALIGN_3_PRIME	chr2	TogoVar
AGAP1_chr2_235489043_236136793	235572975	TTTTCTTC others(3): Show TTTTCTTCTTC	T T	intron_variant intron_variant	MODIFIER	HG00438.hp2 HG00438.hp2	a0002 a0002	a0002c0007 a0002c0007	a0002c0007t0023 a0002c0007t0023	a0002c0007t0023g0085 a0002c0007t0023g0085	1	98	0.0102	-10	c.163 others(29): Show c.163+78129_163+78138delTCTTCTTCTT	AGAP1	ENSG00000157985.20	transcript	ENST00000304032.13	protein_coding	1/17		INFO_REALIGN_3_PRIME	chr2	TogoVar

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