Joint Open Genome and Omics Platform (JoGo)

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regionname	pos	ref	alt	annotation	impact	samples	ahapids	chapids	thapids	thapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
APOA1_chr11_116830751_116842622	116831273	TTCTTTCT others(3): Show TTCTTTCTTTC	T T	downstream_gene_variant downstream_gene_variant	MODIFIER	NA18970.hp2 NA18970.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0001	a0002c0002t0001g0006 a0002c0002t0001g0006	1	446	0.0022	-10	c.45 others(21): Show c.4525_*4534delGAAAGAAAGA	APOA1	ENSG00000118137.10	transcript	ENST00000236850.5	protein_coding		4477		chr11	TogoVar
APOA1_chr11_116830751_116842622	116831275	CTTTCTTT others(3): Show CTTTCTTTCCT	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00140.hp2 HG00280.hp1 HG00642.hp1 others(64): Show HG00140.hp2 HG00280.hp1 HG00642.hp1 HG01074.hp1 HG01099.hp2 HG01109.hp1 HG01123.hp2 HG01257.hp2 HG01258.hp1 HG01346.hp2 HG01515.hp2 HG01516.hp2 HG01517.hp1 HG01517.hp2 HG01891.hp2 HG02109.hp2 HG02145.hp1 HG02165.hp1 HG02257.hp2 HG02615.hp1 HG02630.hp2 HG02683.hp1 HG02717.hp1 HG02717.hp2 HG02723.hp2 HG02809.hp1 HG02818.hp1 HG02818.hp2 HG02895.hp2 HG02896.hp2 HG02965.hp1 HG02976.hp1 HG03098.hp2 HG03130.hp1 HG03239.hp1 HG03471.hp1 HG03486.hp1 HG03486.hp2 HG03516.hp1 HG04204.hp1 NA18522.hp2 NA18612.hp2 NA18906.hp2 NA18940.hp2 NA18944.hp2 NA18947.hp1 NA18951.hp1 NA18952.hp2 NA18956.hp1 NA18960.hp1 NA18961.hp2 NA18966.hp2 NA18967.hp2 NA18969.hp1 NA18977.hp1 NA18979.hp2 NA18992.hp2 NA18998.hp1 NA19000.hp2 NA19012.hp1 NA19012.hp2 NA19030.hp2 NA19043.hp2 NA19062.hp2 NA19072.hp2 NA20805.hp2 NA21309.hp2	a0001 a0002 a0003 a0001 a0002 a0003	a0001c0001 a0002c0002 a0003c0003 a0001c0001 a0002c0002 a0003c0003	a0001c0001t0001 a0002c0002t0001 a0003c0003t0001 a0001c0001t0001 a0002c0002t0001 a0003c0003t0001	a0001c0001t0001g0001 a0001c0001t0001g0003 a0001c0001t0001g0004 others(4): Show a0001c0001t0001g0001 a0001c0001t0001g0003 a0001c0001t0001g0004 a0001c0001t0001g0005 a0001c0001t0001g0015 a0002c0002t0001g0006 a0003c0003t0001g0008	67	443	0.1512	-10	c.45 others(21): Show c.4523_*4532delAGGAAAGAAA	APOA1	ENSG00000118137.10	transcript	ENST00000236850.5	protein_coding		4475		chr11	TogoVar
APOA2_chr1_161217292_161228628	161221660	CTTTTTTT others(3): Show CTTTTTTTTTT	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02895.hp2 HG02896.hp1 HG02896.hp2 others(5): Show HG02895.hp2 HG02896.hp1 HG02896.hp2 HG02897.hp2 HG02970.hp1 HG03098.hp1 HG03516.hp2 NA18522.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0001	8	65	0.1231	-10	c.73 others(19): Show c.735_*744delAAAAAAAAAA	APOA2	ENSG00000158874.11	transcript	ENST00000367990.7	protein_coding		631		chr1	TogoVar
APOA2_chr1_161217292_161228628	161223055	CCACACAC others(3): Show CCACACACACA	C C	splice_region_variant others(1): Show splice_region_variant intron_variant	LOW	HG00140.hp1 HG00280.hp1 HG00408.hp1 others(73): Show HG00140.hp1 HG00280.hp1 HG00408.hp1 HG00673.hp2 HG00735.hp1 HG00735.hp2 HG01070.hp2 HG01175.hp1 HG01243.hp1 HG01261.hp2 HG02004.hp1 HG02004.hp2 HG02071.hp1 HG02109.hp1 HG02155.hp1 HG02165.hp2 HG02698.hp2 HG02738.hp2 HG03209.hp1 HG03491.hp2 HG03540.hp1 HG03654.hp2 HG03688.hp1 HG03688.hp2 HG03927.hp2 HG04115.hp1 HG04199.hp1 HG04204.hp2 HG04228.hp2 NA18747.hp2 NA18939.hp1 NA18940.hp2 NA18947.hp1 NA18948.hp2 NA18952.hp1 NA18953.hp2 NA18954.hp2 NA18959.hp2 NA18960.hp1 NA18963.hp1 NA18965.hp1 NA18966.hp1 NA18967.hp2 NA18969.hp1 NA18969.hp2 NA18970.hp2 NA18974.hp2 NA18977.hp2 NA18982.hp2 NA18983.hp1 NA18987.hp2 NA18988.hp1 NA18992.hp1 NA18998.hp2 NA19000.hp1 NA19003.hp1 NA19003.hp2 NA19006.hp1 NA19009.hp2 NA19055.hp2 NA19058.hp1 NA19060.hp1 NA19064.hp1 NA19064.hp2 NA19065.hp1 NA19067.hp1 NA19074.hp2 NA19075.hp1 NA19077.hp1 NA19082.hp1 NA19085.hp1 NA19086.hp1 NA19086.hp2 NA19090.hp1 NA19091.hp1 NA20805.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0003 a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0003	76	141	0.5390	-10	c.53- others(20): Show c.53-15_53-6delTGTGTGTGTG	APOA2	ENSG00000158874.11	transcript	ENST00000367990.7	protein_coding	2/3			chr1	TogoVar
APOA4_chr11_116815700_116828304	116818237	ATATGAAT others(3): Show ATATGAATATC	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02735.hp2 HG02735.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0001 a0001c0001t0002g0001	1	460	0.0022	-10	c.26 others(21): Show c.2620_*2629delGATATTCATA	APOA4	ENSG00000110244.7	transcript	ENST00000357780.5	protein_coding		2462		chr11	TogoVar
APOA4_chr11_116815700_116828304	116818406	ATATATGA others(3): Show ATATATGAATT	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00140.hp1 HG00140.hp2 HG00741.hp2 others(18): Show HG00140.hp1 HG00140.hp2 HG00741.hp2 HG01070.hp1 HG01071.hp2 HG01167.hp2 HG01255.hp1 HG01256.hp1 HG01261.hp2 HG01515.hp1 HG01516.hp2 HG01517.hp1 HG02015.hp1 HG02602.hp1 HG03490.hp2 HG03492.hp1 HG03831.hp1 HG03927.hp1 HG04228.hp1 NA20805.hp1 NA20905.hp1	a0001 a0003 a0001 a0003	a0001c0001 a0003c0004 a0003c0007 a0001c0001 a0003c0004 a0003c0007	a0001c0001t0001 a0003c0004t0001 a0003c0007t0001 a0001c0001t0001 a0003c0004t0001 a0003c0007t0001	a0001c0001t0001g0003 a0003c0004t0001g0009 a0003c0007t0001g0012 a0001c0001t0001g0003 a0003c0004t0001g0009 a0003c0007t0001g0012	21	460	0.0457	-10	c.24 others(21): Show c.2451_*2460delAATTCATATA	APOA4	ENSG00000110244.7	transcript	ENST00000357780.5	protein_coding		2293		chr11	TogoVar
APOA4_chr11_116815700_116828304	116818483	TTATATAT others(3): Show TTATATATGAA	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01109.hp2 HG01109.hp2	a0005 a0005	a0005c0011 a0005c0011	a0005c0011t0001 a0005c0011t0001	a0005c0011t0001g0034 a0005c0011t0001g0034	1	378	0.0026	-10	c.23 others(21): Show c.2375_*2384delTCATATATAA	APOA4	ENSG00000110244.7	transcript	ENST00000357780.5	protein_coding		2217		chr11	TogoVar
APOA4_chr11_116815700_116828304	116818483	TTATATAT others(3): Show TTATATATGAA	T T	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00140.hp1 HG00140.hp2 HG00738.hp1 others(28): Show HG00140.hp1 HG00140.hp2 HG00738.hp1 HG00741.hp2 HG01070.hp1 HG01071.hp2 HG01167.hp2 HG01255.hp1 HG01256.hp1 HG01261.hp2 HG01515.hp1 HG01516.hp2 HG01517.hp1 HG02258.hp2 HG02559.hp1 HG02602.hp1 HG02622.hp1 HG02647.hp1 HG02717.hp2 HG02922.hp2 HG03195.hp1 HG03209.hp2 HG03490.hp2 HG03492.hp1 HG03669.hp2 HG03831.hp1 HG03927.hp1 HG04228.hp1 HG04228.hp2 NA20805.hp1 NA20905.hp1	a0002 a0003 a0002 a0003	a0002c0002 a0003c0004 a0003c0007 a0002c0002 a0003c0004 a0003c0007	a0002c0002t0001 a0003c0004t0001 a0003c0004t0003 others(1): Show a0002c0002t0001 a0003c0004t0001 a0003c0004t0003 a0003c0007t0001	a0002c0002t0001g0002 a0003c0004t0001g0009 a0003c0004t0003g0011 others(2): Show a0002c0002t0001g0002 a0003c0004t0001g0009 a0003c0004t0003g0011 a0003c0004t0003g0019 a0003c0007t0001g0012	31	408	0.0760	-10	c.23 others(21): Show c.2374_*2383delTTCATATATA	APOA4	ENSG00000110244.7	transcript	ENST00000357780.5	protein_coding		2216		chr11	TogoVar
APOA4_chr11_116815700_116828304	116818598	ATGTGTGT others(3): Show ATGTGTGTGTG	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02165.hp1 NA19062.hp1 HG02165.hp1 NA19062.hp1	a0001 a0006 a0001 a0006	a0001c0006 a0006c0012 a0001c0006 a0006c0012	a0001c0006t0001 a0006c0012t0001 a0001c0006t0001 a0006c0012t0001	a0001c0006t0001g0008 a0006c0012t0001g0017 a0001c0006t0001g0008 a0006c0012t0001g0017	2	434	0.0046	-10	c.22 others(21): Show c.2259_*2268delCACACACACA	APOA4	ENSG00000110244.7	transcript	ENST00000357780.5	protein_coding		2101		chr11	TogoVar
APOA4_chr11_116815700_116828304	116818624	ATATATAT others(3): Show ATATATATTTT	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02897.hp2 HG02897.hp2	a0001 a0001	a0001c0010 a0001c0010	a0001c0010t0001 a0001c0010t0001	a0001c0010t0001g0014 a0001c0010t0001g0014	1	450	0.0022	-10	c.22 others(21): Show c.2233_*2242delAAAATATATA	APOA4	ENSG00000110244.7	transcript	ENST00000357780.5	protein_coding		2075		chr11	TogoVar
APOA4_chr11_116815700_116828304	116824770	AAAATATA others(3): Show AAAATATATAT	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01257.hp1 HG01257.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0001 a0001c0001t0002g0001	1	429	0.0023	-10	c.-15 others(21): Show c.-1589_-1580delATATATATTT	APOA4	ENSG00000110244.7	transcript	ENST00000357780.5	protein_coding		1467		chr11	TogoVar
APOA4_chr11_116815700_116828304	116824789	ATATATAT others(3): Show ATATATATTTT	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00423.hp2 HG01099.hp1 HG01928.hp2 others(20): Show HG00423.hp2 HG01099.hp1 HG01928.hp2 HG01934.hp2 HG01943.hp2 HG02056.hp1 HG02074.hp1 HG02129.hp1 HG02300.hp1 HG02735.hp1 HG02738.hp2 HG03139.hp2 HG04115.hp1 HG04204.hp2 NA18747.hp1 NA18951.hp2 NA18981.hp2 NA19005.hp2 NA19011.hp1 NA19066.hp1 NA19070.hp1 NA19078.hp1 NA20129.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0001 a0001c0001t0002g0001	23	458	0.0502	-10	c.-16 others(21): Show c.-1608_-1599delAAAATATATA	APOA4	ENSG00000110244.7	transcript	ENST00000357780.5	protein_coding		1486		chr11	TogoVar
APOA4_chr11_116815700_116828304	116824791	ATATATTT others(3): Show ATATATTTTTT	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00099.hp1 HG00280.hp2 HG00323.hp2 others(52): Show HG00099.hp1 HG00280.hp2 HG00323.hp2 HG00438.hp1 HG00558.hp2 HG00639.hp2 HG00733.hp2 HG00738.hp2 HG00741.hp1 HG01069.hp1 HG01070.hp2 HG01071.hp1 HG01106.hp1 HG01106.hp2 HG01123.hp1 HG01168.hp2 HG01192.hp2 HG01358.hp1 HG01361.hp1 HG01361.hp2 HG01433.hp2 HG01515.hp2 HG01884.hp1 HG01934.hp1 HG01975.hp1 HG01975.hp2 HG01993.hp1 HG02004.hp2 HG02155.hp1 HG02300.hp2 HG02683.hp2 HG02698.hp1 HG02809.hp1 HG03491.hp1 HG03492.hp2 HG03540.hp1 HG03669.hp1 HG03688.hp1 HG03710.hp1 HG03942.hp2 NA18941.hp1 NA18942.hp1 NA18957.hp2 NA18962.hp1 NA18966.hp1 NA18968.hp1 NA18973.hp1 NA18983.hp1 NA19007.hp1 NA19011.hp2 NA19056.hp2 NA19060.hp1 NA19064.hp2 NA19068.hp1 NA20752.hp2	a0001 a0004 a0007 others(2): Show a0001 a0004 a0007 a0008 a0011	a0001c0001 a0004c0008 a0007c0019 others(2): Show a0001c0001 a0004c0008 a0007c0019 a0008c0017 a0011c0014	a0001c0001t0002 a0004c0008t0002 a0007c0019t0002 others(2): Show a0001c0001t0002 a0004c0008t0002 a0007c0019t0002 a0008c0017t0002 a0011c0014t0002	a0001c0001t0002g0001 a0001c0001t0002g0025 a0001c0001t0002g0032 others(4): Show a0001c0001t0002g0001 a0001c0001t0002g0025 a0001c0001t0002g0032 a0004c0008t0002g0013 a0007c0019t0002g0029 a0008c0017t0002g0028 a0011c0014t0002g0026	55	446	0.1233	-10	c.-16 others(21): Show c.-1610_-1601delAAAAAATATA	APOA4	ENSG00000110244.7	transcript	ENST00000357780.5	protein_coding		1488		chr11	TogoVar
APOA4_chr11_116815700_116828304	116824793	ATATTTTT others(3): Show ATATTTTTTTT	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00735.hp1 HG01358.hp2 HG02071.hp2 others(13): Show HG00735.hp1 HG01358.hp2 HG02071.hp2 HG02083.hp2 HG02602.hp2 HG02738.hp1 HG03834.hp1 HG04184.hp1 NA18612.hp2 NA18943.hp1 NA18950.hp1 NA18955.hp2 NA18970.hp1 NA18978.hp1 NA19060.hp2 NA20805.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0001 a0001c0001t0002g0001	16	446	0.0359	-10	c.-16 others(21): Show c.-1612_-1603delAAAAAAAATA	APOA4	ENSG00000110244.7	transcript	ENST00000357780.5	protein_coding		1490		chr11	TogoVar
APOA4_chr11_116815700_116828304	116824795	ATTTTTTT others(3): Show ATTTTTTTTTT	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02040.hp1 HG02080.hp2 HG02129.hp2 others(7): Show HG02040.hp1 HG02080.hp2 HG02129.hp2 HG02523.hp1 NA18747.hp2 NA18948.hp2 NA18986.hp1 NA19002.hp2 NA19083.hp2 NA19087.hp1	a0001 a0013 a0001 a0013	a0001c0001 a0013c0015 a0001c0001 a0013c0015	a0001c0001t0002 a0013c0015t0002 a0001c0001t0002 a0013c0015t0002	a0001c0001t0002g0001 a0013c0015t0002g0027 a0001c0001t0002g0001 a0013c0015t0002g0027	10	296	0.0338	-10	c.-16 others(21): Show c.-1614_-1605delAAAAAAAAAA	APOA4	ENSG00000110244.7	transcript	ENST00000357780.5	protein_coding		1492		chr11	TogoVar
APOBEC1_chr12_7644400_7670908	7657043	CGTGTGTG others(3): Show CGTGTGTGTGT	C C	intron_variant intron_variant	MODIFIER	HG00609.hp2 HG03669.hp1 NA18984.hp2 others(4): Show HG00609.hp2 HG03669.hp1 NA18984.hp2 NA18986.hp2 NA19000.hp2 NA19043.hp1 NA19240.hp1	a0001 a0002 a0001 a0002	a0001c0002 a0001c0003 a0002c0001 a0001c0002 a0001c0003 a0002c0001	a0001c0002t0001 a0001c0003t0001 a0002c0001t0001 a0001c0002t0001 a0001c0003t0001 a0002c0001t0001	a0001c0002t0001g0187 a0001c0002t0001g0190 a0001c0002t0001g0213 others(4): Show a0001c0002t0001g0187 a0001c0002t0001g0190 a0001c0002t0001g0213 a0001c0002t0001g0267 a0001c0003t0001g0059 a0002c0001t0001g0341 a0002c0001t0001g0342	7	111	0.0631	-10	c.17- others(25): Show c.17-2421_17-2412delACACACACAC	APOBEC1	ENSG00000111701.7	transcript	ENST00000229304.5	protein_coding	1/4			chr12	TogoVar
APOBEC1_chr12_7644400_7670908	7658045	CTGTTTTG others(3): Show CTGTTTTGTTT	C C	intron_variant intron_variant	MODIFIER	HG02055.hp1 HG02258.hp1 HG02523.hp2 others(4): Show HG02055.hp1 HG02258.hp1 HG02523.hp2 HG02630.hp2 HG02965.hp1 HG03225.hp2 NA19002.hp2	a0001 a0002 a0001 a0002	a0001c0003 a0002c0001 a0001c0003 a0002c0001	a0001c0003t0001 a0002c0001t0001 a0001c0003t0001 a0002c0001t0001	a0001c0003t0001g0043 a0001c0003t0001g0044 a0001c0003t0001g0045 others(4): Show a0001c0003t0001g0043 a0001c0003t0001g0044 a0001c0003t0001g0045 a0001c0003t0001g0068 a0001c0003t0001g0321 a0002c0001t0001g0130 a0002c0001t0001g0174	7	232	0.0302	-10	c.17- others(25): Show c.17-3423_17-3414delAAACAAAACA	APOBEC1	ENSG00000111701.7	transcript	ENST00000229304.5	protein_coding	1/4			chr12	TogoVar
APOBEC1_chr12_7644400_7670908	7659294	CAAAAAAA others(3): Show CAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG03209.hp2 HG03579.hp1 HG06807.hp2 others(5): Show HG03209.hp2 HG03579.hp1 HG06807.hp2 NA18968.hp1 NA18981.hp2 NA18999.hp1 NA18999.hp2 NA19030.hp2	a0001 a0002 a0001 a0002	a0001c0003 a0002c0001 a0001c0003 a0002c0001	a0001c0003t0001 a0002c0001t0002 a0001c0003t0001 a0002c0001t0002	a0001c0003t0001g0312 a0001c0003t0001g0324 a0001c0003t0001g0329 others(5): Show a0001c0003t0001g0312 a0001c0003t0001g0324 a0001c0003t0001g0329 a0001c0003t0001g0338 a0002c0001t0002g0346 a0002c0001t0002g0372 a0002c0001t0002g0373 a0002c0001t0002g0377	8	314	0.0255	-10	c.17- others(25): Show c.17-4672_17-4663delTTTTTTTTTT	APOBEC1	ENSG00000111701.7	transcript	ENST00000229304.5	protein_coding	1/4			chr12	TogoVar
APOBEC1_chr12_7644400_7670908	7659318	AAAAAATA others(3): Show AAAAAATATAT	A A	intron_variant intron_variant	MODIFIER	NA18983.hp1 NA18983.hp1	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0001 a0001c0003t0001	a0001c0003t0001g0034 a0001c0003t0001g0034	1	372	0.0027	-10	c.17- others(25): Show c.17-4696_17-4687delATATATTTTT	APOBEC1	ENSG00000111701.7	transcript	ENST00000229304.5	protein_coding	1/4			chr12	TogoVar
APOBEC1_chr12_7644400_7670908	7665752	GACACACA others(3): Show GACACACACAC	G G	intron_variant intron_variant	MODIFIER	HG01192.hp2 HG02809.hp1 HG02809.hp2 others(2): Show HG01192.hp2 HG02809.hp1 HG02809.hp2 HG03041.hp2 HG03130.hp1	a0001 a0001	a0001c0002 a0001c0003 a0001c0002 a0001c0003	a0001c0002t0001 a0001c0003t0001 a0001c0002t0001 a0001c0003t0001	a0001c0002t0001g0080 a0001c0002t0001g0081 a0001c0002t0001g0082 others(2): Show a0001c0002t0001g0080 a0001c0002t0001g0081 a0001c0002t0001g0082 a0001c0003t0001g0083 a0001c0003t0001g0084	5	50	0.1000	-10	c.16+ others(22): Show c.16+95_16+104delGTGTGTGTGT	APOBEC1	ENSG00000111701.7	transcript	ENST00000229304.5	protein_coding	1/4			chr12	TogoVar
APOBEC2_chr6_41048202_41069891	41058149	CCCCACAC others(3): Show CCCCACACACA	C C	intron_variant intron_variant	MODIFIER	HG01175.hp1 HG01175.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0117 a0001c0001t0001g0117	1	285	0.0035	-10	c.132 others(27): Show c.132-3177_132-3168delCCACACACAC	APOBEC2	ENSG00000124701.6	transcript	ENST00000244669.3	protein_coding	1/2		INFO_REALIGN_3_PRIME	chr6	TogoVar
APOBEC3B_chr22_38977347_38997779	38988685	CTTTCTTT others(3): Show CTTTCTTTCTT	C C	intron_variant intron_variant	MODIFIER	HG01167.hp1 HG02976.hp2 NA21309.hp1 HG01167.hp1 HG02976.hp2 NA21309.hp1	a0001 a0004 a0001 a0004	a0001c0001 a0004c0007 a0001c0001 a0004c0007	a0001c0001t0001 a0004c0007t0001 a0001c0001t0001 a0004c0007t0001	a0001c0001t0001g0076 a0004c0007t0001g0055 a0004c0007t0001g0168 a0001c0001t0001g0076 a0004c0007t0001g0055 a0004c0007t0001g0168	3	338	0.0089	-10	c.570 others(25): Show c.570-770_570-761delTTCTTTCTTT	APOBEC3B	ENSG00000179750.16	transcript	ENST00000333467.4	protein_coding	4/7		INFO_REALIGN_3_PRIME	chr22	TogoVar
APOBEC3D_chr22_39016127_39038277	39018818	CAAAAAAA others(3): Show CAAAAAAAAAA	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	NA19089.hp2 NA19089.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0006 a0001c0001t0006	a0001c0001t0006g0027 a0001c0001t0006g0027	1	65	0.0154	-10	c.-27 others(21): Show c.-2701_-2692delAAAAAAAAAA	APOBEC3D	ENSG00000243811.12	transcript	ENST00000216099.13	protein_coding		2308		chr22	TogoVar
APOBEC3H_chr22_39092244_39109067	39093582	CAAAAAAA others(3): Show CAAAAAAAAAA	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	NA19054.hp1 NA19054.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0057 a0001c0001t0001g0057	1	107	0.0093	-10	c.-37 others(21): Show c.-3768_-3759delAAAAAAAAAA	APOBEC3H	ENSG00000100298.16	transcript	ENST00000442487.8	protein_coding		3661		chr22	TogoVar
APOBEC3H_chr22_39092244_39109067	39102962	CAAAAAAA others(3): Show CAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG00099.hp2 HG00140.hp1 HG00280.hp2 others(105): Show HG00099.hp2 HG00140.hp1 HG00280.hp2 HG00558.hp2 HG00597.hp2 HG00673.hp2 HG00741.hp1 HG01069.hp2 HG01070.hp2 HG01071.hp1 HG01081.hp1 HG01167.hp2 HG01169.hp2 HG01192.hp2 HG01243.hp1 HG01255.hp1 HG01496.hp1 HG01515.hp2 HG01517.hp2 HG01884.hp2 HG01891.hp1 HG01993.hp1 HG02040.hp1 HG02074.hp1 HG02074.hp2 HG02129.hp1 HG02132.hp1 HG02280.hp1 HG02280.hp2 HG02293.hp2 HG02523.hp1 HG02523.hp2 HG02559.hp1 HG02572.hp2 HG02602.hp2 HG02630.hp1 HG02683.hp2 HG02717.hp1 HG02723.hp2 HG02735.hp1 HG02738.hp1 HG02738.hp2 HG02809.hp1 HG02809.hp2 HG02886.hp2 HG02895.hp1 HG02895.hp2 HG02897.hp1 HG02965.hp2 HG03017.hp1 HG03098.hp1 HG03139.hp2 HG03195.hp1 HG03209.hp2 HG03453.hp1 HG03471.hp1 HG03516.hp1 HG03516.hp2 HG03540.hp1 HG03540.hp2 HG03579.hp1 HG03669.hp1 HG03688.hp1 HG03688.hp2 HG03831.hp1 HG04199.hp1 HG04199.hp2 HG04228.hp2 NA18522.hp2 NA18612.hp2 NA18941.hp2 NA18942.hp2 NA18945.hp2 NA18947.hp1 NA18947.hp2 NA18948.hp2 NA18949.hp1 NA18950.hp1 NA18951.hp1 NA18953.hp2 NA18954.hp1 NA18955.hp2 NA18960.hp1 NA18963.hp2 NA18964.hp1 NA18972.hp2 NA18977.hp2 NA18982.hp2 NA18983.hp1 NA18997.hp1 NA19012.hp2 NA19030.hp1 NA19056.hp1 NA19060.hp2 NA19065.hp2 NA19066.hp2 NA19070.hp2 NA19075.hp1 NA19077.hp2 NA19079.hp1 NA19082.hp2 NA19085.hp1 NA19086.hp2 NA19090.hp2 NA19091.hp2 NA20129.hp1 NA20129.hp2 NA21309.hp2	a0002 a0003 a0004 a0002 a0003 a0004	a0002c0002 a0003c0003 a0004c0004 others(1): Show a0002c0002 a0003c0003 a0004c0004 a0004c0012	a0002c0002t0003 a0003c0003t0002 a0003c0003t0003 others(5): Show a0002c0002t0003 a0003c0003t0002 a0003c0003t0003 a0003c0003t0009 a0003c0003t0010 a0004c0004t0002 a0004c0004t0003 a0004c0012t0002	a0002c0002t0003g0041 a0002c0002t0003g0094 a0002c0002t0003g0095 others(31): Show a0002c0002t0003g0041 a0002c0002t0003g0094 a0002c0002t0003g0095 a0003c0003t0002g0003 a0003c0003t0002g0008 a0003c0003t0002g0010 a0003c0003t0002g0021 a0003c0003t0002g0022 a0003c0003t0002g0023 a0003c0003t0002g0036 a0003c0003t0002g0064 a0003c0003t0002g0066 a0003c0003t0002g0069 a0003c0003t0002g0073 a0003c0003t0002g0074 a0003c0003t0002g0078 a0003c0003t0003g0026 a0003c0003t0003g0082 a0003c0003t0003g0085 a0003c0003t0003g0086 a0003c0003t0003g0099 a0003c0003t0009g0084 a0003c0003t0010g0083 a0004c0004t0002g0003 a0004c0004t0002g0025 a0004c0004t0002g0065 a0004c0004t0002g0067 a0004c0004t0002g0068 a0004c0004t0002g0070 a0004c0004t0002g0076 a0004c0004t0002g0077 a0004c0004t0002g0079 a0004c0004t0003g0031 a0004c0012t0002g0003	108	252	0.4286	-10	c.544 others(25): Show c.544-707_544-698delAAAAAAAAAA	APOBEC3H	ENSG00000100298.16	transcript	ENST00000442487.8	protein_coding	4/4		INFO_REALIGN_3_PRIME	chr22	TogoVar
APOC1_chr19_44909608_44924346	44910674	CTTTTTTT others(3): Show CTTTTTTTTTT	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00738.hp1 HG01123.hp1 HG01167.hp2 others(41): Show HG00738.hp1 HG01123.hp1 HG01167.hp2 HG01168.hp2 HG01169.hp1 HG01243.hp2 HG01361.hp1 HG01891.hp1 HG01891.hp2 HG02040.hp2 HG02055.hp1 HG02071.hp1 HG02071.hp2 HG02074.hp1 HG02155.hp2 HG02165.hp1 HG02559.hp1 HG02602.hp1 HG02615.hp2 HG02647.hp1 HG02717.hp2 HG02818.hp1 HG02886.hp2 HG02896.hp1 HG02897.hp1 HG02976.hp1 HG03139.hp1 HG03195.hp1 HG03453.hp1 HG03471.hp1 HG03579.hp2 NA18612.hp2 NA18906.hp1 NA18940.hp1 NA18959.hp1 NA18961.hp1 NA18974.hp2 NA18983.hp1 NA19006.hp2 NA19030.hp1 NA19043.hp2 NA19059.hp2 NA19064.hp1 NA19077.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0001 a0001c0001t0002	a0001c0001t0001g0001 a0001c0001t0001g0004 a0001c0001t0001g0010 others(23): Show a0001c0001t0001g0001 a0001c0001t0001g0004 a0001c0001t0001g0010 a0001c0001t0001g0014 a0001c0001t0001g0018 a0001c0001t0001g0020 a0001c0001t0001g0031 a0001c0001t0001g0032 a0001c0001t0001g0033 a0001c0001t0001g0034 a0001c0001t0001g0036 a0001c0001t0001g0037 a0001c0001t0001g0075 a0001c0001t0001g0078 a0001c0001t0001g0079 a0001c0001t0001g0080 a0001c0001t0001g0082 a0001c0001t0001g0083 a0001c0001t0001g0085 a0001c0001t0001g0087 a0001c0001t0001g0090 a0001c0001t0001g0108 a0001c0001t0001g0134 a0001c0001t0001g0135 a0001c0001t0001g0141 a0001c0001t0002g0077	44	193	0.2280	-10	c.-40 others(21): Show c.-4079_-4070delTTTTTTTTTT	APOC1	ENSG00000130208.10	transcript	ENST00000592535.6	protein_coding		3933		chr19	TogoVar
APOC1_chr19_44909608_44924346	44917590	AAAGAAAA others(3): Show AAAGAAAAGAG	A A	intron_variant intron_variant	MODIFIER	HG01109.hp1 HG01109.hp2 HG01109.hp1 HG01109.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0039 a0001c0001t0001g0039	2	434	0.0046	-10	c.194 others(27): Show c.194+1278_194+1287delGAAAAGAGAA	APOC1	ENSG00000130208.10	transcript	ENST00000592535.6	protein_coding	3/3		INFO_REALIGN_3_PRIME	chr19	TogoVar
APOC3_chr11_116824907_116838072	116831191	TTCTTTCT others(3): Show TTCTTTCTTTC	T T	intron_variant intron_variant	MODIFIER	HG00280.hp2 HG00323.hp2 HG00558.hp2 others(20): Show HG00280.hp2 HG00323.hp2 HG00558.hp2 HG01169.hp2 HG01361.hp1 HG01361.hp2 HG01433.hp1 HG01884.hp2 HG01993.hp2 HG02055.hp1 HG02809.hp2 HG03491.hp2 HG03492.hp2 HG03710.hp1 NA18947.hp1 NA18967.hp1 NA18975.hp2 NA18994.hp2 NA19068.hp1 NA19082.hp1 NA20129.hp2 NA20805.hp2 NA21309.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0001t0003 a0001c0002t0003 a0001c0001t0001 a0001c0001t0003 a0001c0002t0003	a0001c0001t0001g0002 a0001c0001t0001g0004 a0001c0001t0001g0033 others(5): Show a0001c0001t0001g0002 a0001c0001t0001g0004 a0001c0001t0001g0033 a0001c0001t0001g0071 a0001c0001t0001g0075 a0001c0001t0003g0002 a0001c0001t0003g0014 a0001c0002t0003g0002	23	309	0.0744	-10	c.179 others(25): Show c.179+297_179+306delCTTTCTTTCT	APOC3	ENSG00000110245.12	transcript	ENST00000227667.8	protein_coding	3/3		INFO_REALIGN_3_PRIME	chr11	TogoVar
APOC3_chr11_116824907_116838072	116831197	CTTTCTTT others(3): Show CTTTCTTTCTT	C C	intron_variant intron_variant	MODIFIER	HG02717.hp1 HG03098.hp2 NA19030.hp2 HG02717.hp1 HG03098.hp2 NA19030.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0035 a0001c0001t0001g0043 a0001c0001t0001g0044 a0001c0001t0001g0035 a0001c0001t0001g0043 a0001c0001t0001g0044	3	406	0.0074	-10	c.179 others(25): Show c.179+303_179+312delTTCTTTCTTT	APOC3	ENSG00000110245.12	transcript	ENST00000227667.8	protein_coding	3/3		INFO_REALIGN_3_PRIME	chr11	TogoVar
APOC3_chr11_116824907_116838072	116831273	TTCTTTCT others(3): Show TTCTTTCTTTC	T T	intron_variant intron_variant	MODIFIER	NA19062.hp1 NA19062.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0066 a0001c0001t0001g0066	1	448	0.0022	-10	c.179 others(25): Show c.179+378_179+387delTCTTTCTTTC	APOC3	ENSG00000110245.12	transcript	ENST00000227667.8	protein_coding	3/3			chr11	TogoVar
APOC3_chr11_116824907_116838072	116831275	CTTTCTTT others(3): Show CTTTCTTTCCT	C C	intron_variant intron_variant	MODIFIER	HG00140.hp2 HG00280.hp1 HG01074.hp2 others(53): Show HG00140.hp2 HG00280.hp1 HG01074.hp2 HG01109.hp1 HG01123.hp1 HG01257.hp2 HG01258.hp2 HG01346.hp1 HG01515.hp2 HG01516.hp1 HG01517.hp1 HG01517.hp2 HG01891.hp2 HG02165.hp1 HG02257.hp1 HG02257.hp2 HG02683.hp1 HG02717.hp1 HG02717.hp2 HG02723.hp1 HG02818.hp2 HG02896.hp2 HG02965.hp2 HG02976.hp1 HG03130.hp1 HG03239.hp1 HG03486.hp1 HG04204.hp1 NA18612.hp1 NA18906.hp2 NA18940.hp2 NA18941.hp1 NA18944.hp2 NA18947.hp2 NA18951.hp2 NA18952.hp1 NA18956.hp1 NA18960.hp2 NA18961.hp2 NA18966.hp2 NA18967.hp2 NA18969.hp2 NA18979.hp2 NA18994.hp2 NA18998.hp2 NA19000.hp2 NA19012.hp1 NA19012.hp2 NA19030.hp2 NA19062.hp2 NA19070.hp2 NA19072.hp2 NA19076.hp2 NA19090.hp1 NA20129.hp1 NA20805.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0003 a0001c0001t0001 a0001c0001t0003	a0001c0001t0001g0008 a0001c0001t0001g0010 a0001c0001t0001g0011 others(19): Show a0001c0001t0001g0008 a0001c0001t0001g0010 a0001c0001t0001g0011 a0001c0001t0001g0013 a0001c0001t0001g0024 a0001c0001t0001g0029 a0001c0001t0001g0033 a0001c0001t0001g0034 a0001c0001t0001g0035 a0001c0001t0001g0038 a0001c0001t0001g0040 a0001c0001t0001g0042 a0001c0001t0001g0044 a0001c0001t0001g0045 a0001c0001t0001g0046 a0001c0001t0001g0048 a0001c0001t0001g0050 a0001c0001t0001g0052 a0001c0001t0001g0080 a0001c0001t0001g0082 a0001c0001t0003g0014 a0001c0001t0003g0031	56	445	0.1258	-10	c.179 others(25): Show c.179+382_179+391delTCTTTCCTTT	APOC3	ENSG00000110245.12	transcript	ENST00000227667.8	protein_coding	3/3		INFO_REALIGN_3_PRIME	chr11	TogoVar
APOD_chr3_195563705_195588940	195587794	TACACACA others(3): Show TACACACACAC	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02622.hp2 HG02647.hp1 HG02717.hp2 others(3): Show HG02622.hp2 HG02647.hp1 HG02717.hp2 HG03516.hp2 HG03579.hp2 NA18522.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0005 a0001c0001t0003 a0001c0001t0005	a0001c0001t0003g0032 a0001c0001t0003g0179 a0001c0001t0005g0067 others(3): Show a0001c0001t0003g0032 a0001c0001t0003g0179 a0001c0001t0005g0067 a0001c0001t0005g0068 a0001c0001t0005g0070 a0001c0001t0005g0107	6	54	0.1111	-10	c.-39 others(21): Show c.-3961_-3952delGTGTGTGTGT	APOD	ENSG00000189058.9	transcript	ENST00000343267.8	protein_coding		3855		chr3	TogoVar
APOE_chr19_44900796_44914393	44910674	CTTTTTTT others(3): Show CTTTTTTTTTT	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00738.hp2 HG01123.hp2 HG01167.hp2 others(40): Show HG00738.hp2 HG01123.hp2 HG01167.hp2 HG01168.hp2 HG01169.hp1 HG01243.hp2 HG01361.hp1 HG01891.hp1 HG01891.hp2 HG02040.hp1 HG02055.hp1 HG02071.hp1 HG02071.hp2 HG02074.hp1 HG02155.hp2 HG02165.hp2 HG02559.hp1 HG02602.hp2 HG02615.hp1 HG02647.hp1 HG02717.hp1 HG02818.hp1 HG02886.hp2 HG02896.hp2 HG02897.hp2 HG02976.hp2 HG03139.hp1 HG03195.hp1 HG03453.hp1 HG03471.hp2 HG03579.hp2 NA18612.hp1 NA18906.hp1 NA18940.hp1 NA18959.hp2 NA18961.hp1 NA18974.hp2 NA18983.hp1 NA19030.hp1 NA19043.hp1 NA19064.hp2 NA19077.hp1 NA19078.hp2	a0001 a0002 a0003 a0001 a0002 a0003	a0001c0001 a0002c0002 a0003c0003 a0001c0001 a0002c0002 a0003c0003	a0001c0001t0001 a0002c0002t0001 a0003c0003t0001 a0001c0001t0001 a0002c0002t0001 a0003c0003t0001	a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0003 others(3): Show a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0003 a0002c0002t0001g0003 a0003c0003t0001g0003 a0003c0003t0001g0022	43	188	0.2287	-10	c.14 others(21): Show c.1425_*1434delTTTTTTTTTT	APOE	ENSG00000130203.10	transcript	ENST00000252486.9	protein_coding		1282		chr19	TogoVar
APOF_chr12_56355568_56367857	56357026	ATTTTTTT others(3): Show ATTTTTTTTTT	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	NA18946.hp2 NA18946.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0001	1	51	0.0196	-10	c.41 others(21): Show c.4189_*4198delAAAAAAAAAA	APOF	ENSG00000175336.10	transcript	ENST00000398189.4	protein_coding		3541		chr12	TogoVar
APOH_chr17_66207033_66234415	66224637	AGAAGGGA others(3): Show AGAAGGGAAGG	A A	intron_variant intron_variant	MODIFIER	HG00408.hp2 HG00544.hp1 HG00609.hp2 others(34): Show HG00408.hp2 HG00544.hp1 HG00609.hp2 HG00621.hp2 HG01069.hp1 HG01071.hp1 HG01081.hp2 HG01261.hp2 HG01433.hp1 HG01516.hp2 HG01517.hp2 HG01928.hp2 HG02074.hp1 HG02083.hp1 HG02155.hp2 HG02257.hp2 HG02273.hp2 HG02559.hp2 HG02572.hp1 HG02615.hp1 HG02809.hp2 HG03654.hp1 HG03688.hp1 NA18612.hp1 NA18612.hp2 NA18965.hp2 NA18967.hp1 NA18968.hp1 NA18986.hp1 NA18999.hp1 NA19056.hp1 NA19060.hp1 NA19065.hp2 NA19066.hp1 NA19066.hp2 NA19068.hp1 NA19090.hp1	a0001 a0002 a0003 others(1): Show a0001 a0002 a0003 a0004	a0001c0001 a0001c0010 a0002c0002 others(2): Show a0001c0001 a0001c0010 a0002c0002 a0003c0003 a0004c0004	a0001c0001t0001 a0001c0010t0001 a0002c0002t0001 others(3): Show a0001c0001t0001 a0001c0010t0001 a0002c0002t0001 a0002c0002t0002 a0003c0003t0003 a0004c0004t0003	a0001c0001t0001g0019 a0001c0001t0001g0036 a0001c0001t0001g0037 others(31): Show a0001c0001t0001g0019 a0001c0001t0001g0036 a0001c0001t0001g0037 a0001c0001t0001g0091 a0001c0001t0001g0092 a0001c0001t0001g0093 a0001c0001t0001g0094 a0001c0001t0001g0245 a0001c0001t0001g0265 a0001c0001t0001g0266 a0001c0001t0001g0267 a0001c0001t0001g0268 a0001c0001t0001g0269 a0001c0001t0001g0270 a0001c0001t0001g0271 a0001c0001t0001g0272 a0001c0001t0001g0273 a0001c0001t0001g0293 a0001c0010t0001g0089 a0001c0010t0001g0090 a0002c0002t0001g0139 a0002c0002t0001g0140 a0002c0002t0001g0307 a0002c0002t0001g0308 a0002c0002t0002g0225 a0002c0002t0002g0226 a0002c0002t0002g0230 a0003c0003t0003g0044 a0003c0003t0003g0051 a0003c0003t0003g0053 a0003c0003t0003g0054 a0003c0003t0003g0055 a0003c0003t0003g0059 a0004c0004t0003g0052	37	262	0.1412	-10	c.339 others(25): Show c.339-873_339-864delCCTTCCCTTC	APOH	ENSG00000091583.11	transcript	ENST00000205948.11	protein_coding	3/7			chr17	TogoVar
APOH_chr17_66207033_66234415	66224686	GGGAAGGG others(3): Show GGGAAGGGAAA	G G	intron_variant intron_variant	MODIFIER	HG00323.hp2 HG00733.hp1 HG03942.hp2 others(4): Show HG00323.hp2 HG00733.hp1 HG03942.hp2 HG04115.hp1 HG04199.hp2 NA18960.hp1 NA19004.hp1	a0002 a0003 a0006 a0002 a0003 a0006	a0002c0002 a0003c0003 a0006c0006 a0002c0002 a0003c0003 a0006c0006	a0002c0002t0002 a0003c0003t0003 a0006c0006t0002 a0002c0002t0002 a0003c0003t0003 a0006c0006t0002	a0002c0002t0002g0029 a0002c0002t0002g0030 a0002c0002t0002g0208 others(4): Show a0002c0002t0002g0029 a0002c0002t0002g0030 a0002c0002t0002g0208 a0002c0002t0002g0216 a0002c0002t0002g0301 a0003c0003t0003g0045 a0006c0006t0002g0239	7	266	0.0263	-10	c.339 others(25): Show c.339-922_339-913delTTTCCCTTCC	APOH	ENSG00000091583.11	transcript	ENST00000205948.11	protein_coding	3/7			chr17	TogoVar
APOH_chr17_66207033_66234415	66224691	GGGAAAGG others(3): Show GGGAAAGGAAA	G G	intron_variant intron_variant	MODIFIER	HG02602.hp1 HG04199.hp1 HG04228.hp2 HG02602.hp1 HG04199.hp1 HG04228.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0001 a0002c0002t0001 a0002c0002t0002 a0001c0001t0001 a0002c0002t0001 a0002c0002t0002	a0001c0001t0001g0197 a0002c0002t0001g0118 a0002c0002t0002g0210 a0001c0001t0001g0197 a0002c0002t0001g0118 a0002c0002t0002g0210	3	197	0.0152	-10	c.339 others(25): Show c.339-927_339-918delTTTCCTTTCC	APOH	ENSG00000091583.11	transcript	ENST00000205948.11	protein_coding	3/7			chr17	TogoVar
APOH_chr17_66207033_66234415	66232625	CAAAAAAA others(3): Show CAAAAAAAAAA	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02080.hp1 HG02145.hp2 HG02165.hp2 others(1): Show HG02080.hp1 HG02145.hp2 HG02165.hp2 HG02572.hp2	a0005 a0005	a0005c0005 a0005c0005	a0005c0005t0002 a0005c0005t0002	a0005c0005t0002g0067 a0005c0005t0002g0123 a0005c0005t0002g0124 others(1): Show a0005c0005t0002g0067 a0005c0005t0002g0123 a0005c0005t0002g0124 a0005c0005t0002g0125	4	36	0.1111	-10	c.-32 others(21): Show c.-3256_-3247delTTTTTTTTTT	APOH	ENSG00000091583.11	transcript	ENST00000205948.11	protein_coding		3211		chr17	TogoVar
APOL2_chr22_36221209_36244527	36235746	TGGGTGGG others(3): Show TGGGTGGGTGG	T T	intron_variant intron_variant	MODIFIER	HG00639.hp2 HG01074.hp2 HG01106.hp2 others(36): Show HG00639.hp2 HG01074.hp2 HG01106.hp2 HG01123.hp1 HG01167.hp2 HG01169.hp2 HG01175.hp1 HG01261.hp2 HG01358.hp1 HG01361.hp2 HG01934.hp1 HG01952.hp2 HG01975.hp1 HG01978.hp1 HG01978.hp2 HG01981.hp1 HG02004.hp1 HG02004.hp2 HG02056.hp1 HG02148.hp2 HG02165.hp2 HG02273.hp2 HG02451.hp2 HG02572.hp2 HG02698.hp2 HG02738.hp1 HG03239.hp1 HG03490.hp1 HG03654.hp2 HG03669.hp2 HG03688.hp2 HG04115.hp2 NA18939.hp2 NA18951.hp2 NA18986.hp1 NA19063.hp1 NA19070.hp1 NA19086.hp2 NA19087.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0004 a0001c0001t0014 others(2): Show a0001c0001t0001 a0001c0001t0004 a0001c0001t0014 a0001c0001t0028 a0001c0001t0030	a0001c0001t0001g0109 a0001c0001t0004g0006 a0001c0001t0004g0007 others(15): Show a0001c0001t0001g0109 a0001c0001t0004g0006 a0001c0001t0004g0007 a0001c0001t0004g0015 a0001c0001t0004g0019 a0001c0001t0004g0042 a0001c0001t0004g0049 a0001c0001t0004g0050 a0001c0001t0004g0074 a0001c0001t0004g0077 a0001c0001t0004g0114 a0001c0001t0004g0124 a0001c0001t0004g0148 a0001c0001t0014g0043 a0001c0001t0014g0079 a0001c0001t0014g0147 a0001c0001t0028g0073 a0001c0001t0030g0108	39	370	0.1054	-10	c.-13 others(29): Show c.-133-2301_-133-2292delCCACCCACCC	APOL2	ENSG00000128335.14	transcript	ENST00000358502.10	protein_coding	1/4			chr22	TogoVar
APOL2_chr22_36221209_36244527	36235748	GGTGGGTG others(3): Show GGTGGGTGGGT	G G	intron_variant intron_variant	MODIFIER	NA19030.hp2 NA19030.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0013 a0001c0001t0013	a0001c0001t0013g0129 a0001c0001t0013g0129	1	307	0.0033	-10	c.-13 others(29): Show c.-133-2303_-133-2294delACCCACCCAC	APOL2	ENSG00000128335.14	transcript	ENST00000358502.10	protein_coding	1/4			chr22	TogoVar
APOL4_chr22_36184128_36206809	36195770	TCTCTCTC others(3): Show TCTCTCTCACA	T T	intron_variant intron_variant	MODIFIER	HG01167.hp2 HG01167.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0002 a0002c0002t0002	a0002c0002t0002g0101 a0002c0002t0002g0101	1	430	0.0023	-10	c.83- others(23): Show c.83-343_83-334delTGTGAGAGAG	APOL4	ENSG00000100336.18	transcript	ENST00000683024.1	protein_coding	2/3			chr22	TogoVar
APOL4_chr22_36184128_36206809	36195772	TCTCTCAC others(3): Show TCTCTCACACA	T T	intron_variant intron_variant	MODIFIER	HG00099.hp1 HG00438.hp2 HG00544.hp1 others(165): Show HG00099.hp1 HG00438.hp2 HG00544.hp1 HG00544.hp2 HG00558.hp1 HG00558.hp2 HG00597.hp1 HG00597.hp2 HG00609.hp1 HG00609.hp2 HG00639.hp2 HG00642.hp2 HG00673.hp2 HG00733.hp1 HG00733.hp2 HG00741.hp1 HG00741.hp2 HG01074.hp1 HG01099.hp1 HG01106.hp1 HG01123.hp1 HG01123.hp2 HG01167.hp1 HG01169.hp2 HG01175.hp1 HG01255.hp1 HG01256.hp1 HG01256.hp2 HG01257.hp1 HG01258.hp1 HG01258.hp2 HG01346.hp2 HG01358.hp2 HG01891.hp2 HG01934.hp1 HG01943.hp2 HG01952.hp2 HG01978.hp2 HG01981.hp2 HG02015.hp1 HG02040.hp1 HG02071.hp2 HG02074.hp2 HG02080.hp1 HG02080.hp2 HG02083.hp1 HG02083.hp2 HG02132.hp1 HG02132.hp2 HG02155.hp1 HG02155.hp2 HG02300.hp2 HG02486.hp2 HG02523.hp2 HG02602.hp1 HG02683.hp1 HG02735.hp2 HG02818.hp2 HG03017.hp1 HG03017.hp2 HG03098.hp1 HG03490.hp2 HG03654.hp1 HG03654.hp2 HG03669.hp1 HG03669.hp2 HG03704.hp1 HG03704.hp2 HG03831.hp1 HG03834.hp1 HG03834.hp2 HG03927.hp1 HG03942.hp2 HG04115.hp1 HG04184.hp1 HG04184.hp2 HG04199.hp1 HG04199.hp2 HG04204.hp1 HG04204.hp2 NA18612.hp1 NA18612.hp2 NA18747.hp1 NA18747.hp2 NA18939.hp1 NA18941.hp1 NA18941.hp2 NA18942.hp2 NA18943.hp2 NA18944.hp1 NA18945.hp1 NA18946.hp1 NA18948.hp1 NA18948.hp2 NA18949.hp2 NA18950.hp1 NA18951.hp1 NA18952.hp1 NA18952.hp2 NA18954.hp1 NA18954.hp2 NA18955.hp2 NA18959.hp1 NA18961.hp2 NA18962.hp2 NA18965.hp1 NA18965.hp2 NA18966.hp1 NA18966.hp2 NA18968.hp2 NA18969.hp1 NA18972.hp2 NA18973.hp1 NA18973.hp2 NA18979.hp1 NA18979.hp2 NA18980.hp1 NA18980.hp2 NA18982.hp1 NA18982.hp2 NA18983.hp2 NA18984.hp1 NA18984.hp2 NA18985.hp1 NA18985.hp2 NA18986.hp2 NA18987.hp1 NA18987.hp2 NA18988.hp1 NA18991.hp1 NA18993.hp1 NA18993.hp2 NA18995.hp2 NA18997.hp1 NA18997.hp2 NA19000.hp2 NA19009.hp1 NA19010.hp1 NA19011.hp2 NA19012.hp1 NA19012.hp2 NA19043.hp1 NA19056.hp1 NA19056.hp2 NA19057.hp2 NA19059.hp2 NA19060.hp1 NA19060.hp2 NA19062.hp1 NA19062.hp2 NA19063.hp1 NA19064.hp1 NA19065.hp2 NA19067.hp1 NA19070.hp1 NA19070.hp2 NA19074.hp1 NA19074.hp2 NA19079.hp2 NA19081.hp2 NA19082.hp1 NA19087.hp1 NA19087.hp2 NA19088.hp1 NA19088.hp2 NA20129.hp1 NA20300.hp2 NA20905.hp1	a0001 a0002 a0005 others(4): Show a0001 a0002 a0005 a0007 a0012 a0013 a0014	a0001c0001 a0001c0007 a0002c0002 others(5): Show a0001c0001 a0001c0007 a0002c0002 a0005c0008 a0007c0012 a0012c0013 a0013c0014 a0014c0016	a0001c0001t0001 a0001c0001t0004 a0001c0001t0007 others(12): Show a0001c0001t0001 a0001c0001t0004 a0001c0001t0007 a0001c0001t0009 a0001c0001t0012 a0001c0001t0026 a0001c0001t0033 a0001c0001t0034 a0001c0007t0001 a0002c0002t0002 a0005c0008t0001 a0007c0012t0001 a0012c0013t0001 a0013c0014t0001 a0014c0016t0001	a0001c0001t0001g0001 a0001c0001t0001g0013 a0001c0001t0001g0016 others(55): Show a0001c0001t0001g0001 a0001c0001t0001g0013 a0001c0001t0001g0016 a0001c0001t0001g0021 a0001c0001t0001g0027 a0001c0001t0001g0033 a0001c0001t0001g0035 a0001c0001t0001g0079 a0001c0001t0001g0080 a0001c0001t0001g0084 a0001c0001t0001g0088 a0001c0001t0001g0091 a0001c0001t0001g0094 a0001c0001t0001g0113 a0001c0001t0001g0116 a0001c0001t0001g0122 a0001c0001t0001g0130 a0001c0001t0001g0131 a0001c0001t0001g0135 a0001c0001t0001g0136 a0001c0001t0001g0142 a0001c0001t0001g0143 a0001c0001t0001g0146 a0001c0001t0001g0149 a0001c0001t0001g0150 a0001c0001t0001g0156 a0001c0001t0001g0160 a0001c0001t0001g0166 a0001c0001t0001g0169 a0001c0001t0001g0171 a0001c0001t0001g0176 a0001c0001t0001g0177 a0001c0001t0001g0178 a0001c0001t0004g0002 a0001c0001t0004g0134 a0001c0001t0004g0151 a0001c0001t0004g0189 a0001c0001t0007g0005 a0001c0001t0007g0081 a0001c0001t0007g0132 a0001c0001t0007g0140 a0001c0001t0007g0154 a0001c0001t0009g0028 a0001c0001t0009g0170 a0001c0001t0012g0043 a0001c0001t0026g0144 a0001c0001t0033g0193 a0001c0001t0034g0194 a0001c0007t0001g0018 a0001c0007t0001g0044 a0002c0002t0002g0126 a0005c0008t0001g0024 a0005c0008t0001g0039 a0005c0008t0001g0057 a0007c0012t0001g0041 a0012c0013t0001g0168 a0013c0014t0001g0152 a0014c0016t0001g0155	168	411	0.4088	-10	c.83- others(23): Show c.83-345_83-336delTGTGTGAGAG	APOL4	ENSG00000100336.18	transcript	ENST00000683024.1	protein_coding	2/3			chr22	TogoVar
APOL4_chr22_36184128_36206809	36195774	TCTCACAC others(3): Show TCTCACACACA	T T	intron_variant intron_variant	MODIFIER	HG00438.hp1 HG01943.hp1 HG02165.hp1 others(4): Show HG00438.hp1 HG01943.hp1 HG02165.hp1 HG02165.hp2 HG03579.hp1 NA18939.hp2 NA19055.hp2	a0001 a0004 a0001 a0004	a0001c0001 a0004c0006 a0001c0001 a0004c0006	a0001c0001t0001 a0001c0001t0004 a0004c0006t0008 a0001c0001t0001 a0001c0001t0004 a0004c0006t0008	a0001c0001t0001g0001 a0001c0001t0001g0067 a0001c0001t0004g0002 others(2): Show a0001c0001t0001g0001 a0001c0001t0001g0067 a0001c0001t0004g0002 a0001c0001t0004g0042 a0004c0006t0008g0072	7	414	0.0169	-10	c.83- others(23): Show c.83-347_83-338delTGTGTGTGAG	APOL4	ENSG00000100336.18	transcript	ENST00000683024.1	protein_coding	2/3			chr22	TogoVar
APOL6_chr22_35643446_35673404	35645922	AATGCCTG others(3): Show AATGCCTGCTG	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02523.hp1 HG02523.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0007 a0001c0001t0001g0007	1	384	0.0026	-10	c.-27 others(21): Show c.-2748_-2739delATGCCTGCTG	APOL6	ENSG00000221963.6	transcript	ENST00000409652.5	protein_coding		2523		chr22	TogoVar
APOL6_chr22_35643446_35673404	35672266	TTGTTTCT others(3): Show TTGTTTCTCTC	T T	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01069.hp1 HG01069.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0020 a0001c0001t0020	a0001c0001t0020g0005 a0001c0001t0020g0005	1	384	0.0026	-10	c.12 others(23): Show c.12671_*12680delTGTTTCTCTC	APOL6	ENSG00000221963.6	transcript	ENST00000409652.5	protein_coding		3863		chr22	TogoVar
APOM_chr6_31650894_31663210	31651538	CAAAAAAA others(3): Show CAAAAAAAAGA	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00323.hp2 HG00642.hp1 HG00733.hp2 others(26): Show HG00323.hp2 HG00642.hp1 HG00733.hp2 HG01257.hp2 HG01981.hp1 HG02055.hp2 HG02080.hp2 HG02148.hp2 HG02559.hp2 HG02572.hp2 HG02615.hp1 HG02630.hp1 HG02717.hp1 HG02735.hp1 HG02735.hp2 HG02886.hp2 HG03098.hp2 HG03139.hp1 HG03239.hp2 HG03516.hp2 HG03834.hp2 HG04184.hp1 HG04199.hp2 HG04204.hp2 HG04228.hp2 NA18948.hp1 NA19066.hp2 NA20752.hp2 NA20805.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0001	29	345	0.0841	-10	c.-44 others(21): Show c.-4428_-4419delAAAAAAAAGA	APOM	ENSG00000204444.11	transcript	ENST00000375916.4	protein_coding		4355		chr6	TogoVar
APOM_chr6_31650894_31663210	31652320	AACACACA others(3): Show AACACACACAC	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	NA19006.hp1 NA19006.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0001	1	146	0.0068	-10	c.-36 others(21): Show c.-3646_-3637delACACACACAC	APOM	ENSG00000204444.11	transcript	ENST00000375916.4	protein_coding		3573		chr6	TogoVar
APOM_chr6_31650894_31663210	31660731	GGGGAGCC others(3): Show GGGGAGCCGCC	G G	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02970.hp1 HG03540.hp2 NA18522.hp2 HG02970.hp1 HG03540.hp2 NA18522.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0001	3	418	0.0072	-10	c.26 others(21): Show c.2643_*2652delGGGAGCCGCC	APOM	ENSG00000204444.11	transcript	ENST00000375916.4	protein_coding		2522		chr6	TogoVar
APOOL_chrX_84998877_85098315	85067627	AACACACA others(3): Show AACACACACAC	A A	intron_variant intron_variant	MODIFIER	HG02109.hp1 HG02559.hp1 HG02109.hp1 HG02559.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0038 a0001c0001t0039 a0001c0001t0038 a0001c0001t0039	a0001c0001t0038g0022 a0001c0001t0039g0023 a0001c0001t0038g0022 a0001c0001t0039g0023	2	71	0.0282	-10	c.486 others(25): Show c.486+440_486+449delACACACACAC	APOOL	ENSG00000155008.16	transcript	ENST00000373173.7	protein_coding	6/8		INFO_REALIGN_3_PRIME	chrX	TogoVar
APOO_chrX_23828353_23912938	23829565	AAAAAAAA others(3): Show AAAAAAAAAAT	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02895.hp1 HG02897.hp1 HG02895.hp1 HG02897.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0003 a0002c0002t0003	a0002c0002t0003g0125 a0002c0002t0003g0126 a0002c0002t0003g0125 a0002c0002t0003g0126	2	243	0.0082	-10	c.40 others(21): Show c.4067_*4076delATTTTTTTTT	APOO	ENSG00000184831.14	transcript	ENST00000379226.9	protein_coding		3787		chrX	TogoVar

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