Joint Open Genome and Omics Platform (JoGo)

Search by Variant

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Chr

Chromosome name (e.g., chr11).

Snpeff genename

Exact SnpEff gene name.

Sampleids

Target sampleid (e.g. HG02615).

Snpeff haplotype class

Haplotype-annotation class (e.g., ahapid, ahapid+chapid).

Snpeff annotation impact

Exact impact level (e.g., HIGH, MODERATE, LOW).

Snpeff annotation impact detail

Keyword match in SnpEff annotation.

Hapid

One or more haplotype IDs (comma-separated; e.g., a0001, a01, a0001c0001, a01c02, a1c2, a0001c0001t0005, a0001c0001t0005g0018).

Samplehapid

Sample haplotype IDs to include (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

No_hapid

Haplotype IDs to exclude (comma-separated; e.g., a0001, a0002, a0001c0001, a0001c0001t0005, a1, a01).

No_samplehapid

Sample haplotype IDs to exclude (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

Start

Start position (GRCh38).

End

End position (GRCh38).

Minac

Minimum alternate allele count (≥).

Maxac

Maximum alternate allele count (≤).

Minlen

Minimum variant length (≥).

Maxlen

Maximum variant length (≤).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	pos	ref	alt	annotation	impact	samples	ahapids	achapids	acthapids	actghapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
ATG4C_chr1_62779132_62870516	62850854	GTATATAT others(3): Show GTATATATATA	G G	intron_variant intron_variant	MODIFIER	HG00544.hp2 HG03225.hp1 NA18747.hp2 others(1): Show HG00544.hp2 HG03225.hp1 NA18747.hp2 NA19084.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0067 a0001c0001t0001g0256 a0001c0001t0001g0257 others(1): Show a0001c0001t0001g0067 a0001c0001t0001g0256 a0001c0001t0001g0257 a0001c0001t0001g0277	4	322	0.0124	-10	c.120 others(29): Show c.1209+9346_1209+9355delTATATATATA	ATG4C	ENSG00000125703.15	transcript	ENST00000317868.9	protein_coding	10/10		INFO_REALIGN_3_PRIME	chr1	TogoVar
ATG4C_chr1_62779132_62870516	62850893	TATATATA others(3): Show TATATATATAC	T T	intron_variant intron_variant	MODIFIER	HG01255.hp1 HG02258.hp1 HG02818.hp2 HG01255.hp1 HG02258.hp1 HG02818.hp2	a0001 a0003 a0001 a0003	a0001c0001 a0003c0005 a0001c0001 a0003c0005	a0001c0001t0002 a0001c0001t0004 a0003c0005t0001 a0001c0001t0002 a0001c0001t0004 a0003c0005t0001	a0001c0001t0002g0131 a0001c0001t0004g0134 a0003c0005t0001g0301 a0001c0001t0002g0131 a0001c0001t0004g0134 a0003c0005t0001g0301	3	322	0.0093	-10	c.120 others(29): Show c.1209+9350_1209+9359delTATATACATA	ATG4C	ENSG00000125703.15	transcript	ENST00000317868.9	protein_coding	10/10		INFO_REALIGN_3_PRIME	chr1	TogoVar
ATG4C_chr1_62779132_62870516	62861576	AACACACA others(3): Show AACACACACAC	A A	intron_variant intron_variant	MODIFIER	HG01255.hp1 HG02886.hp2 HG02922.hp2 others(10): Show HG01255.hp1 HG02886.hp2 HG02922.hp2 HG02976.hp1 HG03098.hp2 HG03130.hp1 HG03139.hp1 HG03516.hp2 HG03579.hp1 HG06807.hp1 NA18522.hp1 NA18906.hp2 NA19240.hp1	a0001 a0003 a0001 a0003	a0001c0001 a0003c0005 a0001c0001 a0003c0005	a0001c0001t0002 a0001c0001t0010 a0003c0005t0001 a0001c0001t0002 a0001c0001t0010 a0003c0005t0001	a0001c0001t0002g0012 a0001c0001t0002g0244 a0001c0001t0002g0292 others(9): Show a0001c0001t0002g0012 a0001c0001t0002g0244 a0001c0001t0002g0292 a0001c0001t0002g0294 a0001c0001t0002g0295 a0001c0001t0002g0296 a0001c0001t0002g0297 a0001c0001t0002g0298 a0001c0001t0002g0299 a0001c0001t0002g0300 a0001c0001t0010g0242 a0003c0005t0001g0301	13	322	0.0404	-10	c.121 others(29): Show c.1210-2374_1210-2365delCACACACACA	ATG4C	ENSG00000125703.15	transcript	ENST00000317868.9	protein_coding	10/10		INFO_REALIGN_3_PRIME	chr1	TogoVar
ATG4C_chr1_62779132_62870516	62861618	CACACACA others(3): Show CACACACACAG	C C	intron_variant intron_variant	MODIFIER	HG01167.hp2 HG02559.hp1 HG03225.hp1 others(3): Show HG01167.hp2 HG02559.hp1 HG03225.hp1 HG03471.hp2 HG03579.hp2 HG03704.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0144 a0001c0001t0001g0238 a0001c0001t0001g0240 others(3): Show a0001c0001t0001g0144 a0001c0001t0001g0238 a0001c0001t0001g0240 a0001c0001t0001g0241 a0001c0001t0001g0277 a0001c0001t0001g0304	6	322	0.0186	-10	c.121 others(29): Show c.1210-2372_1210-2363delCACACACAGA	ATG4C	ENSG00000125703.15	transcript	ENST00000317868.9	protein_coding	10/10		INFO_REALIGN_3_PRIME	chr1	TogoVar
ATG5_chr6_106179476_106330760	106246390	TCTCACAC others(3): Show TCTCACACACA	T T	intron_variant intron_variant	MODIFIER	HG00408.hp2 HG01952.hp2 HG00408.hp2 HG01952.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0025 a0001c0001t0001g0049 a0001c0001t0001g0025 a0001c0001t0001g0049	2	358	0.0056	-10	c.573 others(27): Show c.573+1750_573+1759delTGTGTGTGAG	ATG5	ENSG00000057663.16	transcript	ENST00000369076.8	protein_coding	6/7			chr6	TogoVar
ATG5_chr6_106179476_106330760	106246392	TCACACAC others(3): Show TCACACACACA	T T	intron_variant intron_variant	MODIFIER	NA19030.hp2 NA19030.hp2	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0002 a0001c0003t0002	a0001c0003t0002g0014 a0001c0003t0002g0014	1	358	0.0028	-10	c.573 others(27): Show c.573+1748_573+1757delTGTGTGTGTG	ATG5	ENSG00000057663.16	transcript	ENST00000369076.8	protein_coding	6/7			chr6	TogoVar
ATG5_chr6_106179476_106330760	106278954	TTAATATA others(3): Show TTAATATACCA	T T	intron_variant intron_variant	MODIFIER	NA19003.hp2 NA19003.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0001	a0002c0002t0001g0051 a0002c0002t0001g0051	1	358	0.0028	-10	c.478 others(25): Show c.478+697_478+706delTGGTATATTA	ATG5	ENSG00000057663.16	transcript	ENST00000369076.8	protein_coding	5/7			chr6	TogoVar
ATG5_chr6_106179476_106330760	106290259	ATTTATTT others(3): Show ATTTATTTTAT	A A	intron_variant intron_variant	MODIFIER	HG00323.hp1 HG00735.hp2 HG01071.hp1 others(22): Show HG00323.hp1 HG00735.hp2 HG01071.hp1 HG01071.hp2 HG01106.hp1 HG01175.hp2 HG01255.hp1 HG01256.hp1 HG01258.hp1 HG01515.hp1 HG01952.hp1 HG02132.hp1 HG02523.hp2 NA18612.hp2 NA18940.hp1 NA18941.hp2 NA18942.hp2 NA18945.hp1 NA18951.hp1 NA18962.hp2 NA18972.hp1 NA18975.hp2 NA19000.hp2 NA19070.hp1 NA19078.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0003 a0001c0001t0001 a0001c0001t0003	a0001c0001t0001g0005 a0001c0001t0001g0077 a0001c0001t0001g0078 others(21): Show a0001c0001t0001g0005 a0001c0001t0001g0077 a0001c0001t0001g0078 a0001c0001t0001g0107 a0001c0001t0001g0114 a0001c0001t0001g0115 a0001c0001t0001g0116 a0001c0001t0001g0117 a0001c0001t0001g0153 a0001c0001t0001g0174 a0001c0001t0001g0193 a0001c0001t0001g0194 a0001c0001t0001g0196 a0001c0001t0001g0197 a0001c0001t0001g0198 a0001c0001t0001g0199 a0001c0001t0001g0200 a0001c0001t0001g0204 a0001c0001t0001g0348 a0001c0001t0003g0108 a0001c0001t0003g0125 a0001c0001t0003g0191 a0001c0001t0003g0192 a0001c0001t0003g0195	25	358	0.0698	-10	c.315 others(27): Show c.315+2759_315+2768delATAAAATAAA	ATG5	ENSG00000057663.16	transcript	ENST00000369076.8	protein_coding	4/7			chr6	TogoVar
ATG5_chr6_106179476_106330760	106297717	AACACACA others(3): Show AACACACACAC	A A	intron_variant intron_variant	MODIFIER	HG02155.hp2 HG02630.hp1 HG02976.hp2 others(2): Show HG02155.hp2 HG02630.hp1 HG02976.hp2 NA18954.hp2 NA18961.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0147 a0001c0001t0001g0148 a0001c0001t0001g0177 others(2): Show a0001c0001t0001g0147 a0001c0001t0001g0148 a0001c0001t0001g0177 a0001c0001t0001g0233 a0001c0001t0001g0318	5	358	0.0140	-10	c.237 others(27): Show c.237-4621_237-4612delGTGTGTGTGT	ATG5	ENSG00000057663.16	transcript	ENST00000369076.8	protein_coding	3/7			chr6	TogoVar
ATG5_chr6_106179476_106330760	106297757	CACACACA others(3): Show CACACACACAT	C C	intron_variant intron_variant	MODIFIER	HG00140.hp1 HG02040.hp2 HG02135.hp1 others(17): Show HG00140.hp1 HG02040.hp2 HG02135.hp1 HG02165.hp2 NA18944.hp2 NA18952.hp2 NA18954.hp1 NA18955.hp1 NA18963.hp2 NA18965.hp2 NA18968.hp2 NA18992.hp1 NA18998.hp2 NA19000.hp1 NA19003.hp2 NA19009.hp2 NA19062.hp1 NA19080.hp1 NA19088.hp2 NA19090.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0001 a0002c0002t0001 a0001c0001t0001 a0002c0002t0001	a0001c0001t0001g0003 a0001c0001t0001g0020 a0001c0001t0001g0023 others(16): Show a0001c0001t0001g0003 a0001c0001t0001g0020 a0001c0001t0001g0023 a0001c0001t0001g0029 a0001c0001t0001g0030 a0001c0001t0001g0031 a0001c0001t0001g0032 a0001c0001t0001g0033 a0001c0001t0001g0034 a0001c0001t0001g0035 a0001c0001t0001g0036 a0001c0001t0001g0037 a0001c0001t0001g0039 a0001c0001t0001g0065 a0002c0002t0001g0051 a0002c0002t0001g0052 a0002c0002t0001g0053 a0002c0002t0001g0054 a0002c0002t0001g0058	20	358	0.0559	-10	c.237 others(27): Show c.237-4661_237-4652delATGTGTGTGT	ATG5	ENSG00000057663.16	transcript	ENST00000369076.8	protein_coding	3/7			chr6	TogoVar
ATG5_chr6_106179476_106330760	106312623	TACACACA others(3): Show TACACACACAC	T T	intron_variant intron_variant	MODIFIER	HG02922.hp1 NA18522.hp1 HG02922.hp1 NA18522.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0005 a0001c0001t0005	a0001c0001t0005g0333 a0001c0001t0005g0334 a0001c0001t0005g0333 a0001c0001t0005g0334	2	358	0.0056	-10	c.108 others(27): Show c.108+3468_108+3477delGTGTGTGTGT	ATG5	ENSG00000057663.16	transcript	ENST00000369076.8	protein_coding	2/7			chr6	TogoVar
ATG7_chr3_11267397_11562665	11269003	TGAGGATG others(3): Show TGAGGATGACC	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	NA19062.hp2 NA19062.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0009 a0001c0001t0002g0009	1	292	0.0034	-10	c.-37 others(21): Show c.-3792_-3783delGAGGATGACC	ATG7	ENSG00000197548.13	transcript	ENST00000693202.1	protein_coding		3393		chr3	TogoVar
ATG7_chr3_11267397_11562665	11285139	CTTTTTTT others(3): Show CTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG00639.hp1 HG01496.hp2 HG00639.hp1 HG01496.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0043 a0001c0001t0001 a0001c0001t0043	a0001c0001t0001g0084 a0001c0001t0043g0054 a0001c0001t0001g0084 a0001c0001t0043g0054	2	292	0.0069	-10	c.-11 others(27): Show c.-11+2712_-11+2721delTTTTTTTTTT	ATG7	ENSG00000197548.13	transcript	ENST00000693202.1	protein_coding	3/20		INFO_REALIGN_3_PRIME	chr3	TogoVar
ATG7_chr3_11267397_11562665	11366971	CTGTGTGT others(3): Show CTGTGTGTGTG	C C	intron_variant intron_variant	MODIFIER	HG01978.hp2 HG02109.hp1 HG02145.hp1 HG01978.hp2 HG02109.hp1 HG02145.hp1	a0001 a0005 a0001 a0005	a0001c0001 a0005c0008 a0001c0001 a0005c0008	a0001c0001t0001 a0001c0001t0004 a0005c0008t0004 a0001c0001t0001 a0001c0001t0004 a0005c0008t0004	a0001c0001t0001g0115 a0001c0001t0004g0273 a0005c0008t0004g0270 a0001c0001t0001g0115 a0001c0001t0004g0273 a0005c0008t0004g0270	3	292	0.0103	-10	c.187 others(29): Show c.1875+2271_1875+2280delGTGTGTGTGT	ATG7	ENSG00000197548.13	transcript	ENST00000693202.1	protein_coding	18/20		INFO_REALIGN_3_PRIME	chr3	TogoVar
ATG7_chr3_11267397_11562665	11374892	CAAAAAAA others(3): Show CAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	NA18951.hp2 NA19058.hp1 NA18951.hp2 NA19058.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0003 a0001c0001t0002 a0001c0001t0003	a0001c0001t0002g0019 a0001c0001t0003g0042 a0001c0001t0002g0019 a0001c0001t0003g0042	2	292	0.0069	-10	c.187 others(29): Show c.1876-5060_1876-5051delAAAAAAAAAA	ATG7	ENSG00000197548.13	transcript	ENST00000693202.1	protein_coding	18/20		INFO_REALIGN_3_PRIME	chr3	TogoVar
ATG7_chr3_11267397_11562665	11411619	CAAAAAAA others(3): Show CAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG00544.hp2 HG01081.hp2 HG02155.hp1 others(6): Show HG00544.hp2 HG01081.hp2 HG02155.hp1 HG02970.hp1 HG02976.hp1 HG03540.hp2 HG06807.hp2 NA19030.hp2 NA19077.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0001t0002 a0001c0001t0005 others(3): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0005 a0001c0002t0004 a0001c0002t0017 a0001c0002t0026	a0001c0001t0001g0215 a0001c0001t0002g0195 a0001c0001t0002g0239 others(6): Show a0001c0001t0001g0215 a0001c0001t0002g0195 a0001c0001t0002g0239 a0001c0001t0005g0149 a0001c0001t0005g0245 a0001c0002t0004g0188 a0001c0002t0017g0119 a0001c0002t0017g0120 a0001c0002t0026g0281	9	292	0.0308	-10	c.195 others(31): Show c.1957-15165_1957-15156delAAAAAAAAAA	ATG7	ENSG00000197548.13	transcript	ENST00000693202.1	protein_coding	19/20		INFO_REALIGN_3_PRIME	chr3	TogoVar
ATG7_chr3_11267397_11562665	11442739	CAAAAAAA others(3): Show CAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG01123.hp2 HG01123.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0062 a0001c0001t0001g0062	1	292	0.0034	-10	c.207 others(31): Show c.2079+15836_2079+15845delAAAAAAAAAA	ATG7	ENSG00000197548.13	transcript	ENST00000693202.1	protein_coding	20/20		INFO_REALIGN_3_PRIME	chr3	TogoVar
ATG7_chr3_11267397_11562665	11470888	TTCAGTCT others(3): Show TTCAGTCTTTC	T T	intron_variant intron_variant	MODIFIER	HG02109.hp2 HG02572.hp1 HG03195.hp2 others(4): Show HG02109.hp2 HG02572.hp1 HG03195.hp2 HG03209.hp1 HG03225.hp2 HG03453.hp1 NA20129.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0002 a0001c0001t0004 a0001c0002t0013 a0001c0001t0002 a0001c0001t0004 a0001c0002t0013	a0001c0001t0002g0183 a0001c0001t0002g0187 a0001c0001t0002g0242 others(4): Show a0001c0001t0002g0183 a0001c0001t0002g0187 a0001c0001t0002g0242 a0001c0001t0002g0250 a0001c0001t0002g0251 a0001c0001t0004g0243 a0001c0002t0013g0252	7	292	0.0240	-10	c.207 others(31): Show c.2079+43965_2079+43974delAGTCTTTCTC	ATG7	ENSG00000197548.13	transcript	ENST00000693202.1	protein_coding	20/20		INFO_REALIGN_3_PRIME	chr3	TogoVar
ATG7_chr3_11267397_11562665	11476418	CTTTTTTT others(3): Show CTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG02895.hp2 HG02895.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0039 a0001c0002t0039	a0001c0002t0039g0007 a0001c0002t0039g0007	1	292	0.0034	-10	c.207 others(31): Show c.2079+49498_2079+49507delTTTTTTTTTT	ATG7	ENSG00000197548.13	transcript	ENST00000693202.1	protein_coding	20/20		INFO_REALIGN_3_PRIME	chr3	TogoVar
ATG7_chr3_11267397_11562665	11497357	CTATATAT others(3): Show CTATATATATA	C C	intron_variant intron_variant	MODIFIER	HG00741.hp2 HG02896.hp2 HG00741.hp2 HG02896.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0002t0007 a0001c0001t0001 a0001c0002t0007	a0001c0001t0001g0076 a0001c0002t0007g0176 a0001c0001t0001g0076 a0001c0002t0007g0176	2	292	0.0069	-10	c.208 others(31): Show c.2080-57428_2080-57419delATATATATAT	ATG7	ENSG00000197548.13	transcript	ENST00000693202.1	protein_coding	20/20		INFO_REALIGN_3_PRIME	chr3	TogoVar
ATG7_chr3_11267397_11562665	11506575	AAAAAAAA others(3): Show AAAAAAAAAAC	A A	intron_variant intron_variant	MODIFIER	HG00280.hp1 HG00423.hp2 HG00609.hp2 others(78): Show HG00280.hp1 HG00423.hp2 HG00609.hp2 HG00642.hp1 HG00642.hp2 HG00673.hp2 HG00733.hp1 HG00738.hp2 HG01074.hp1 HG01074.hp2 HG01106.hp2 HG01256.hp1 HG01361.hp1 HG01361.hp2 HG01496.hp1 HG01516.hp2 HG01934.hp2 HG01943.hp2 HG01981.hp2 HG01993.hp2 HG02015.hp2 HG02027.hp2 HG02056.hp2 HG02071.hp1 HG02074.hp1 HG02074.hp2 HG02080.hp1 HG02083.hp1 HG02132.hp1 HG02155.hp1 HG02165.hp1 HG02257.hp2 HG02486.hp1 HG02559.hp2 HG02683.hp1 HG02698.hp2 HG02886.hp1 HG02976.hp1 HG02976.hp2 HG03017.hp1 HG03017.hp2 HG03098.hp1 HG03130.hp2 HG03209.hp2 HG03239.hp2 HG03490.hp2 HG03491.hp2 HG03710.hp1 HG03710.hp2 HG03927.hp2 HG03942.hp1 HG04204.hp2 NA18747.hp1 NA18906.hp2 NA18939.hp1 NA18945.hp2 NA18946.hp2 NA18949.hp1 NA18950.hp1 NA18951.hp1 NA18951.hp2 NA18953.hp2 NA18954.hp2 NA18955.hp2 NA18969.hp2 NA18971.hp1 NA18973.hp2 NA18980.hp1 NA18981.hp1 NA18981.hp2 NA18983.hp2 NA18994.hp2 NA18998.hp2 NA19010.hp1 NA19010.hp2 NA19030.hp1 NA19030.hp2 NA19062.hp1 NA19077.hp1 NA19081.hp1 NA19087.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(13): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0005 a0001c0001t0006 a0001c0001t0048 a0001c0001t0051 a0001c0002t0001 a0001c0002t0002 a0001c0002t0004 a0001c0002t0011 a0001c0002t0012 a0001c0002t0014 a0001c0002t0024 a0001c0002t0034	a0001c0001t0001g0020 a0001c0001t0001g0022 a0001c0001t0001g0040 others(78): Show a0001c0001t0001g0020 a0001c0001t0001g0022 a0001c0001t0001g0040 a0001c0001t0001g0044 a0001c0001t0001g0055 a0001c0001t0001g0059 a0001c0001t0001g0081 a0001c0001t0001g0085 a0001c0001t0001g0131 a0001c0001t0001g0132 a0001c0001t0001g0134 a0001c0001t0001g0199 a0001c0001t0001g0207 a0001c0001t0001g0209 a0001c0001t0001g0238 a0001c0001t0002g0019 a0001c0001t0002g0028 a0001c0001t0002g0047 a0001c0001t0002g0064 a0001c0001t0002g0069 a0001c0001t0002g0125 a0001c0001t0002g0142 a0001c0001t0002g0192 a0001c0001t0002g0195 a0001c0001t0002g0196 a0001c0001t0002g0197 a0001c0001t0002g0200 a0001c0001t0002g0202 a0001c0001t0002g0203 a0001c0001t0002g0204 a0001c0001t0002g0210 a0001c0001t0002g0212 a0001c0001t0002g0213 a0001c0001t0002g0216 a0001c0001t0002g0217 a0001c0001t0002g0219 a0001c0001t0002g0220 a0001c0001t0002g0223 a0001c0001t0002g0224 a0001c0001t0002g0226 a0001c0001t0002g0228 a0001c0001t0002g0231 a0001c0001t0002g0235 a0001c0001t0002g0236 a0001c0001t0002g0237 a0001c0001t0002g0239 a0001c0001t0002g0240 a0001c0001t0002g0241 a0001c0001t0002g0246 a0001c0001t0002g0249 a0001c0001t0002g0283 a0001c0001t0003g0095 a0001c0001t0004g0184 a0001c0001t0004g0186 a0001c0001t0004g0205 a0001c0001t0004g0221 a0001c0001t0005g0149 a0001c0001t0005g0254 a0001c0001t0005g0260 a0001c0001t0006g0152 a0001c0001t0048g0010 a0001c0001t0051g0198 a0001c0002t0001g0045 a0001c0002t0001g0065 a0001c0002t0001g0086 a0001c0002t0001g0099 a0001c0002t0001g0102 a0001c0002t0001g0180 a0001c0002t0001g0185 a0001c0002t0001g0193 a0001c0002t0001g0229 a0001c0002t0001g0230 a0001c0002t0001g0247 a0001c0002t0002g0225 a0001c0002t0004g0188 a0001c0002t0011g0051 a0001c0002t0012g0248 a0001c0002t0014g0073 a0001c0002t0014g0181 a0001c0002t0024g0263 a0001c0002t0034g0013	81	292	0.2774	-10	c.208 others(31): Show c.2080-48235_2080-48226delAAAAAAAAAC	ATG7	ENSG00000197548.13	transcript	ENST00000693202.1	protein_coding	20/20			chr3	TogoVar
ATG7_chr3_11267397_11562665	11506576	AAAAAAAA others(3): Show AAAAAAAAACC	A A	intron_variant intron_variant	MODIFIER	NA20129.hp1 NA20129.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0016 a0001c0002t0001g0016	1	292	0.0034	-10	c.208 others(31): Show c.2080-48234_2080-48225delAAAAAAAACC	ATG7	ENSG00000197548.13	transcript	ENST00000693202.1	protein_coding	20/20			chr3	TogoVar
ATG7_chr3_11267397_11562665	11519539	GTTTTTTT others(3): Show GTTTTTTTTTT	G G	intron_variant intron_variant	MODIFIER	HG02055.hp1 HG02145.hp1 HG02055.hp1 HG02145.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0004	a0001c0001t0004g0266 a0001c0001t0004g0273 a0001c0001t0004g0266 a0001c0001t0004g0273	2	292	0.0069	-10	c.208 others(31): Show c.2080-35243_2080-35234delTTTTTTTTTT	ATG7	ENSG00000197548.13	transcript	ENST00000693202.1	protein_coding	20/20		INFO_REALIGN_3_PRIME	chr3	TogoVar
ATG7_chr3_11267397_11562665	11527041	ATGTGTGT others(3): Show ATGTGTGTGTG	A A	intron_variant intron_variant	MODIFIER	HG00423.hp1 HG00673.hp1 HG01099.hp2 others(16): Show HG00423.hp1 HG00673.hp1 HG01099.hp2 HG02027.hp2 HG02055.hp2 HG02080.hp2 HG02615.hp1 HG02738.hp2 HG03491.hp1 NA18955.hp1 NA18974.hp1 NA18982.hp2 NA18984.hp2 NA19002.hp1 NA19058.hp1 NA19060.hp1 NA19077.hp2 NA19240.hp1 NA21309.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0003 a0001c0001t0020 a0001c0001t0044 others(3): Show a0001c0001t0003 a0001c0001t0020 a0001c0001t0044 a0001c0001t0047 a0001c0001t0050 a0001c0002t0028	a0001c0001t0003g0008 a0001c0001t0003g0025 a0001c0001t0003g0042 others(16): Show a0001c0001t0003g0008 a0001c0001t0003g0025 a0001c0001t0003g0042 a0001c0001t0003g0068 a0001c0001t0003g0095 a0001c0001t0003g0097 a0001c0001t0003g0106 a0001c0001t0003g0129 a0001c0001t0003g0135 a0001c0001t0003g0253 a0001c0001t0003g0256 a0001c0001t0003g0259 a0001c0001t0003g0261 a0001c0001t0020g0060 a0001c0001t0020g0080 a0001c0001t0044g0262 a0001c0001t0047g0104 a0001c0001t0050g0056 a0001c0002t0028g0048	19	292	0.0651	-10	c.208 others(31): Show c.2080-27748_2080-27739delGTGTGTGTGT	ATG7	ENSG00000197548.13	transcript	ENST00000693202.1	protein_coding	20/20		INFO_REALIGN_3_PRIME	chr3	TogoVar
ATG7_chr3_11267397_11562665	11527063	GTGTGTGT others(3): Show GTGTGTGTGTA	G G	intron_variant intron_variant	MODIFIER	HG02615.hp2 HG02615.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0046 a0001c0001t0046	a0001c0001t0046g0118 a0001c0001t0046g0118	1	292	0.0034	-10	c.208 others(31): Show c.2080-27746_2080-27737delGTGTGTGTAT	ATG7	ENSG00000197548.13	transcript	ENST00000693202.1	protein_coding	20/20		INFO_REALIGN_3_PRIME	chr3	TogoVar
ATG7_chr3_11267397_11562665	11527065	GTGTGTGT others(3): Show GTGTGTGTATA	G G	intron_variant intron_variant	MODIFIER	HG02055.hp1 HG02055.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0004	a0001c0001t0004g0266 a0001c0001t0004g0266	1	292	0.0034	-10	c.208 others(31): Show c.2080-27744_2080-27735delGTGTGTATAT	ATG7	ENSG00000197548.13	transcript	ENST00000693202.1	protein_coding	20/20		INFO_REALIGN_3_PRIME	chr3	TogoVar
ATG7_chr3_11267397_11562665	11527067	GTGTGTAT others(3): Show GTGTGTATATA	G G	intron_variant intron_variant	MODIFIER	NA18950.hp1 NA19240.hp2 NA18950.hp1 NA19240.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0004 a0001c0002t0001 a0001c0001t0004 a0001c0002t0001	a0001c0001t0004g0268 a0001c0002t0001g0065 a0001c0001t0004g0268 a0001c0002t0001g0065	2	292	0.0069	-10	c.208 others(31): Show c.2080-27742_2080-27733delGTGTATATAT	ATG7	ENSG00000197548.13	transcript	ENST00000693202.1	protein_coding	20/20		INFO_REALIGN_3_PRIME	chr3	TogoVar
ATG7_chr3_11267397_11562665	11527069	GTGTATAT others(3): Show GTGTATATATA	G G	intron_variant intron_variant	MODIFIER	HG01071.hp1 HG01168.hp2 HG01175.hp2 HG01071.hp1 HG01168.hp2 HG01175.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0006 a0001c0001t0006	a0001c0001t0006g0145 a0001c0001t0006g0146 a0001c0001t0006g0147 a0001c0001t0006g0145 a0001c0001t0006g0146 a0001c0001t0006g0147	3	292	0.0103	-10	c.208 others(31): Show c.2080-27740_2080-27731delGTATATATAT	ATG7	ENSG00000197548.13	transcript	ENST00000693202.1	protein_coding	20/20		INFO_REALIGN_3_PRIME	chr3	TogoVar
ATG7_chr3_11267397_11562665	11550548	ACTATGCC others(3): Show ACTATGCCTGG	A A	intron_variant intron_variant	MODIFIER	HG02559.hp1 HG02622.hp1 HG02818.hp1 others(4): Show HG02559.hp1 HG02622.hp1 HG02818.hp1 HG02895.hp1 HG02897.hp2 HG03471.hp2 HG03516.hp2	a0002 a0002	a0002c0003 a0002c0004 a0002c0003 a0002c0004	a0002c0003t0008 a0002c0004t0025 a0002c0003t0008 a0002c0004t0025	a0002c0003t0008g0275 a0002c0003t0008g0276 a0002c0003t0008g0277 others(4): Show a0002c0003t0008g0275 a0002c0003t0008g0276 a0002c0003t0008g0277 a0002c0003t0008g0278 a0002c0003t0008g0279 a0002c0003t0008g0280 a0002c0004t0025g0292	7	292	0.0240	-10	c.208 others(29): Show c.2080-4260_2080-4251delATGCCTGGCT	ATG7	ENSG00000197548.13	transcript	ENST00000693202.1	protein_coding	20/20		INFO_REALIGN_3_PRIME	chr3	TogoVar
ATG9B_chr7_151010151_151029494	151029478	TTTTTCTT others(3): Show TTTTTCTTTTC	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00621.hp2 HG00621.hp2	a0002 a0002	a0002c0003 a0002c0003	a0002c0003t0001 a0002c0003t0001	a0002c0003t0001g0028 a0002c0003t0001g0028	1	466	0.0022	-10	c.-50 others(21): Show c.-5065_-5056delGAAAAGAAAA	ATG9B	ENSG00000181652.20	transcript	ENST00000639579.2	protein_coding		4985		chr7	TogoVar
ATIC_chr2_215307059_215354764	215332131	CGTGTGTG others(3): Show CGTGTGTGTGT	C C	intron_variant intron_variant	MODIFIER	HG00099.hp1 HG00140.hp1 HG00408.hp1 others(95): Show HG00099.hp1 HG00140.hp1 HG00408.hp1 HG00423.hp1 HG00438.hp1 HG00558.hp1 HG00558.hp2 HG00609.hp1 HG00621.hp1 HG00621.hp2 HG00673.hp2 HG00735.hp2 HG00738.hp1 HG01106.hp2 HG01123.hp2 HG01168.hp2 HG01169.hp1 HG01192.hp1 HG01192.hp2 HG01255.hp2 HG01261.hp2 HG01433.hp1 HG01952.hp1 HG01975.hp2 HG02015.hp1 HG02040.hp1 HG02056.hp1 HG02071.hp2 HG02083.hp2 HG02132.hp1 HG02135.hp1 HG02135.hp2 HG02273.hp1 HG02273.hp2 HG02293.hp2 HG02300.hp1 HG02622.hp1 HG02698.hp2 HG02818.hp2 HG02895.hp2 HG03139.hp2 HG03516.hp2 HG03669.hp2 HG03710.hp2 HG04199.hp1 NA18940.hp1 NA18941.hp2 NA18942.hp1 NA18943.hp1 NA18944.hp1 NA18945.hp1 NA18947.hp2 NA18948.hp1 NA18949.hp1 NA18951.hp2 NA18954.hp2 NA18955.hp2 NA18961.hp1 NA18965.hp1 NA18967.hp1 NA18970.hp1 NA18971.hp1 NA18971.hp2 NA18972.hp1 NA18973.hp1 NA18975.hp1 NA18977.hp1 NA18980.hp2 NA18981.hp1 NA18981.hp2 NA18982.hp1 NA18984.hp2 NA18990.hp1 NA18991.hp1 NA18993.hp2 NA19001.hp1 NA19002.hp2 NA19003.hp2 NA19004.hp1 NA19005.hp2 NA19007.hp2 NA19009.hp2 NA19010.hp1 NA19030.hp1 NA19054.hp1 NA19055.hp1 NA19057.hp2 NA19060.hp1 NA19063.hp2 NA19065.hp1 NA19068.hp2 NA19070.hp2 NA19077.hp1 NA19078.hp1 NA19080.hp2 NA19085.hp2 NA19088.hp1 NA19090.hp1	a0001 a0007 a0001 a0007	a0001c0001 a0007c0013 a0001c0001 a0007c0013	a0001c0001t0001 a0001c0001t0003 a0001c0001t0009 others(1): Show a0001c0001t0001 a0001c0001t0003 a0001c0001t0009 a0007c0013t0001	a0001c0001t0001g0002 a0001c0001t0001g0008 a0001c0001t0001g0009 others(52): Show a0001c0001t0001g0002 a0001c0001t0001g0008 a0001c0001t0001g0009 a0001c0001t0001g0015 a0001c0001t0001g0017 a0001c0001t0001g0018 a0001c0001t0001g0030 a0001c0001t0001g0031 a0001c0001t0001g0032 a0001c0001t0001g0033 a0001c0001t0001g0034 a0001c0001t0001g0035 a0001c0001t0001g0036 a0001c0001t0001g0037 a0001c0001t0001g0093 a0001c0001t0001g0094 a0001c0001t0001g0101 a0001c0001t0001g0118 a0001c0001t0001g0120 a0001c0001t0001g0121 a0001c0001t0001g0124 a0001c0001t0001g0125 a0001c0001t0001g0127 a0001c0001t0001g0128 a0001c0001t0001g0129 a0001c0001t0001g0130 a0001c0001t0001g0134 a0001c0001t0001g0135 a0001c0001t0001g0136 a0001c0001t0001g0137 a0001c0001t0001g0138 a0001c0001t0001g0139 a0001c0001t0001g0140 a0001c0001t0001g0142 a0001c0001t0001g0143 a0001c0001t0001g0144 a0001c0001t0001g0145 a0001c0001t0001g0146 a0001c0001t0001g0147 a0001c0001t0001g0148 a0001c0001t0001g0149 a0001c0001t0001g0150 a0001c0001t0001g0152 a0001c0001t0001g0153 a0001c0001t0001g0154 a0001c0001t0001g0158 a0001c0001t0001g0159 a0001c0001t0001g0160 a0001c0001t0001g0161 a0001c0001t0001g0222 a0001c0001t0001g0231 a0001c0001t0003g0097 a0001c0001t0003g0198 a0001c0001t0009g0009 a0007c0013t0001g0002	98	382	0.2565	-10	c.689 others(25): Show c.689-216_689-207delGTGTGTGTGT	ATIC	ENSG00000138363.15	transcript	ENST00000236959.14	protein_coding	7/15		INFO_REALIGN_3_PRIME	chr2	TogoVar
ATL1_chr14_50555145_50638045	50555262	TTTTTGTT others(3): Show TTTTTGTTTTG	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00140.hp1 HG00280.hp1 HG00280.hp2 others(171): Show HG00140.hp1 HG00280.hp1 HG00280.hp2 HG00408.hp1 HG00423.hp1 HG00438.hp1 HG00438.hp2 HG00597.hp1 HG00597.hp2 HG00639.hp1 HG00642.hp1 HG00642.hp2 HG00673.hp1 HG00673.hp2 HG00733.hp2 HG00735.hp2 HG00738.hp1 HG00741.hp1 HG01069.hp2 HG01071.hp2 HG01109.hp1 HG01109.hp2 HG01123.hp1 HG01123.hp2 HG01167.hp1 HG01167.hp2 HG01192.hp1 HG01243.hp2 HG01255.hp1 HG01257.hp1 HG01257.hp2 HG01258.hp1 HG01261.hp1 HG01346.hp1 HG01346.hp2 HG01358.hp2 HG01361.hp2 HG01517.hp1 HG01517.hp2 HG01884.hp1 HG01884.hp2 HG01891.hp1 HG01928.hp1 HG01928.hp2 HG01943.hp1 HG01943.hp2 HG01952.hp1 HG01975.hp1 HG01978.hp2 HG01981.hp1 HG01993.hp1 HG02004.hp1 HG02004.hp2 HG02015.hp2 HG02027.hp2 HG02040.hp2 HG02055.hp2 HG02056.hp1 HG02056.hp2 HG02071.hp1 HG02074.hp1 HG02074.hp2 HG02109.hp1 HG02109.hp2 HG02129.hp2 HG02135.hp2 HG02145.hp1 HG02165.hp1 HG02257.hp1 HG02258.hp2 HG02293.hp2 HG02300.hp1 HG02300.hp2 HG02486.hp2 HG02559.hp2 HG02615.hp1 HG02615.hp2 HG02622.hp2 HG02647.hp1 HG02683.hp2 HG02698.hp1 HG02698.hp2 HG02717.hp2 HG02723.hp2 HG02735.hp1 HG02738.hp2 HG02809.hp2 HG02818.hp2 HG02886.hp1 HG02886.hp2 HG02922.hp1 HG02922.hp2 HG02965.hp2 HG02970.hp1 HG02970.hp2 HG02976.hp2 HG03041.hp2 HG03195.hp1 HG03195.hp2 HG03225.hp1 HG03239.hp1 HG03239.hp2 HG03453.hp2 HG03471.hp1 HG03490.hp2 HG03492.hp2 HG03516.hp1 HG03669.hp1 HG03669.hp2 HG03688.hp1 HG03710.hp1 HG03834.hp1 HG03942.hp2 HG04199.hp2 NA18906.hp1 NA18939.hp2 NA18940.hp1 NA18944.hp1 NA18945.hp1 NA18948.hp1 NA18948.hp2 NA18950.hp1 NA18952.hp2 NA18954.hp2 NA18957.hp2 NA18961.hp1 NA18961.hp2 NA18962.hp1 NA18964.hp1 NA18965.hp2 NA18971.hp1 NA18974.hp1 NA18977.hp1 NA18977.hp2 NA18980.hp2 NA18981.hp2 NA18982.hp1 NA18982.hp2 NA18983.hp2 NA18988.hp2 NA18989.hp2 NA18992.hp1 NA18992.hp2 NA18998.hp1 NA18998.hp2 NA18999.hp1 NA19003.hp2 NA19010.hp1 NA19012.hp2 NA19043.hp2 NA19060.hp2 NA19063.hp2 NA19065.hp2 NA19066.hp1 NA19066.hp2 NA19068.hp2 NA19070.hp2 NA19072.hp2 NA19078.hp2 NA19079.hp2 NA19080.hp1 NA19081.hp1 NA19083.hp1 NA19084.hp1 NA19084.hp2 NA19085.hp1 NA19088.hp1 NA19091.hp2 NA19240.hp1 NA20129.hp1 NA20129.hp2 NA20752.hp1 NA21309.hp2 homoSapiens_chm13v2.hp1	a0001 a0001	a0001c0001 a0001c0003 a0001c0010 others(1): Show a0001c0001 a0001c0003 a0001c0010 a0001c0011	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(5): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0003t0001 a0001c0003t0005 a0001c0003t0007 a0001c0010t0001 a0001c0011t0001	a0001c0001t0001g0009 a0001c0001t0001g0010 a0001c0001t0001g0012 others(165): Show a0001c0001t0001g0009 a0001c0001t0001g0010 a0001c0001t0001g0012 a0001c0001t0001g0019 a0001c0001t0001g0054 a0001c0001t0001g0076 a0001c0001t0001g0077 a0001c0001t0001g0078 a0001c0001t0001g0079 a0001c0001t0001g0080 a0001c0001t0001g0081 a0001c0001t0001g0083 a0001c0001t0001g0084 a0001c0001t0001g0086 a0001c0001t0001g0087 a0001c0001t0001g0088 a0001c0001t0001g0090 a0001c0001t0001g0091 a0001c0001t0001g0092 a0001c0001t0001g0093 a0001c0001t0001g0094 a0001c0001t0001g0095 a0001c0001t0001g0096 a0001c0001t0001g0100 a0001c0001t0001g0101 a0001c0001t0001g0102 a0001c0001t0001g0103 a0001c0001t0001g0104 a0001c0001t0001g0105 a0001c0001t0001g0107 a0001c0001t0001g0108 a0001c0001t0001g0109 a0001c0001t0001g0110 a0001c0001t0001g0111 a0001c0001t0001g0112 a0001c0001t0001g0113 a0001c0001t0001g0117 a0001c0001t0001g0118 a0001c0001t0001g0119 a0001c0001t0001g0120 a0001c0001t0001g0121 a0001c0001t0001g0122 a0001c0001t0001g0123 a0001c0001t0001g0124 a0001c0001t0001g0125 a0001c0001t0001g0126 a0001c0001t0001g0127 a0001c0001t0001g0128 a0001c0001t0001g0130 a0001c0001t0001g0131 a0001c0001t0001g0132 a0001c0001t0001g0133 a0001c0001t0001g0134 a0001c0001t0001g0135 a0001c0001t0001g0136 a0001c0001t0001g0138 a0001c0001t0001g0143 a0001c0001t0001g0144 a0001c0001t0001g0145 a0001c0001t0001g0146 a0001c0001t0001g0154 a0001c0001t0001g0155 a0001c0001t0001g0161 a0001c0001t0001g0162 a0001c0001t0001g0164 a0001c0001t0001g0165 a0001c0001t0001g0167 a0001c0001t0001g0168 a0001c0001t0001g0169 a0001c0001t0001g0170 a0001c0001t0001g0171 a0001c0001t0001g0172 a0001c0001t0001g0173 a0001c0001t0001g0174 a0001c0001t0001g0177 a0001c0001t0001g0178 a0001c0001t0001g0179 a0001c0001t0001g0184 a0001c0001t0001g0185 a0001c0001t0001g0188 a0001c0001t0001g0190 a0001c0001t0001g0194 a0001c0001t0001g0198 a0001c0001t0001g0200 a0001c0001t0001g0201 a0001c0001t0001g0203 a0001c0001t0001g0204 a0001c0001t0001g0205 a0001c0001t0001g0206 a0001c0001t0001g0207 a0001c0001t0001g0209 a0001c0001t0001g0210 a0001c0001t0001g0211 a0001c0001t0001g0212 a0001c0001t0001g0213 a0001c0001t0001g0214 a0001c0001t0001g0215 a0001c0001t0001g0216 a0001c0001t0001g0217 a0001c0001t0001g0218 a0001c0001t0001g0219 a0001c0001t0001g0220 a0001c0001t0001g0223 a0001c0001t0001g0224 a0001c0001t0001g0225 a0001c0001t0001g0226 a0001c0001t0001g0227 a0001c0001t0001g0228 a0001c0001t0001g0288 a0001c0001t0001g0289 a0001c0001t0001g0290 a0001c0001t0001g0291 a0001c0001t0001g0292 a0001c0001t0001g0293 a0001c0001t0001g0294 a0001c0001t0001g0295 a0001c0001t0001g0299 a0001c0001t0002g0011 a0001c0001t0002g0064 a0001c0001t0002g0065 a0001c0001t0002g0115 a0001c0001t0002g0156 a0001c0001t0002g0175 a0001c0001t0002g0176 a0001c0001t0002g0180 a0001c0001t0002g0181 a0001c0001t0002g0182 a0001c0001t0002g0183 a0001c0001t0002g0186 a0001c0001t0002g0187 a0001c0001t0002g0189 a0001c0001t0002g0191 a0001c0001t0002g0192 a0001c0001t0002g0193 a0001c0001t0002g0195 a0001c0001t0002g0196 a0001c0001t0003g0129 a0001c0003t0001g0013 a0001c0003t0001g0097 a0001c0003t0001g0098 a0001c0003t0001g0099 a0001c0003t0001g0106 a0001c0003t0001g0137 a0001c0003t0001g0147 a0001c0003t0001g0148 a0001c0003t0001g0149 a0001c0003t0001g0150 a0001c0003t0001g0151 a0001c0003t0001g0152 a0001c0003t0001g0153 a0001c0003t0001g0157 a0001c0003t0001g0158 a0001c0003t0001g0159 a0001c0003t0001g0160 a0001c0003t0001g0163 a0001c0003t0001g0166 a0001c0003t0001g0197 a0001c0003t0001g0199 a0001c0003t0001g0202 a0001c0003t0001g0208 a0001c0003t0001g0221 a0001c0003t0001g0222 a0001c0003t0001g0297 a0001c0003t0001g0298 a0001c0003t0005g0229 a0001c0003t0007g0089 a0001c0010t0001g0116 a0001c0011t0001g0114	174	320	0.5438	-10	c.-50 others(21): Show c.-5003_-4994delTTTTGTTTTG	ATL1	ENSG00000198513.14	transcript	ENST00000358385.12	protein_coding		4882		chr14	TogoVar
ATL1_chr14_50555145_50638045	50574929	GTGTGTGT others(3): Show GTGTGTGTGTA	G G	intron_variant intron_variant	MODIFIER	HG03834.hp1 HG03834.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0223 a0001c0001t0001g0223	1	320	0.0031	-10	c.35- others(27): Show c.35-12900_35-12891delGTGTGTGTAT	ATL1	ENSG00000198513.14	transcript	ENST00000358385.12	protein_coding	1/13		INFO_REALIGN_3_PRIME	chr14	TogoVar
ATL1_chr14_50555145_50638045	50574931	GTGTGTGT others(3): Show GTGTGTGTATA	G G	intron_variant intron_variant	MODIFIER	HG00280.hp2 HG00438.hp2 HG00673.hp2 others(25): Show HG00280.hp2 HG00438.hp2 HG00673.hp2 HG00741.hp1 HG01109.hp2 HG01257.hp1 HG01258.hp1 HG01346.hp2 HG01358.hp2 HG01517.hp2 HG01891.hp1 HG01928.hp2 HG02004.hp2 HG02056.hp1 HG02074.hp2 HG02129.hp2 HG02293.hp2 HG02622.hp2 HG02647.hp1 HG02922.hp2 HG02976.hp2 HG03225.hp1 HG03942.hp2 NA18980.hp2 NA18982.hp1 NA18999.hp1 NA19001.hp1 NA19088.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0009 a0001c0001t0001g0012 a0001c0001t0001g0092 others(23): Show a0001c0001t0001g0009 a0001c0001t0001g0012 a0001c0001t0001g0092 a0001c0001t0001g0093 a0001c0001t0001g0094 a0001c0001t0001g0095 a0001c0001t0001g0120 a0001c0001t0001g0121 a0001c0001t0001g0122 a0001c0001t0001g0123 a0001c0001t0001g0124 a0001c0001t0001g0125 a0001c0001t0001g0126 a0001c0001t0001g0127 a0001c0001t0001g0128 a0001c0001t0001g0168 a0001c0001t0001g0169 a0001c0001t0001g0170 a0001c0001t0001g0171 a0001c0001t0001g0172 a0001c0001t0001g0173 a0001c0001t0001g0201 a0001c0001t0001g0203 a0001c0001t0001g0235 a0001c0001t0001g0288 a0001c0001t0001g0299	28	320	0.0875	-10	c.35- others(27): Show c.35-12898_35-12889delGTGTGTATAT	ATL1	ENSG00000198513.14	transcript	ENST00000358385.12	protein_coding	1/13		INFO_REALIGN_3_PRIME	chr14	TogoVar
ATL1_chr14_50555145_50638045	50574933	GTGTGTAT others(3): Show GTGTGTATATA	G G	intron_variant intron_variant	MODIFIER	HG00438.hp1 HG01069.hp2 HG02056.hp2 others(5): Show HG00438.hp1 HG01069.hp2 HG02056.hp2 HG02135.hp2 NA18965.hp2 NA18983.hp2 NA18988.hp2 NA19078.hp2	a0001 a0001	a0001c0001 a0001c0003 a0001c0001 a0001c0003	a0001c0001t0001 a0001c0003t0001 a0001c0001t0001 a0001c0003t0001	a0001c0001t0001g0130 a0001c0001t0001g0131 a0001c0001t0001g0138 others(5): Show a0001c0001t0001g0130 a0001c0001t0001g0131 a0001c0001t0001g0138 a0001c0001t0001g0198 a0001c0001t0001g0209 a0001c0001t0001g0210 a0001c0001t0001g0226 a0001c0003t0001g0197	8	320	0.0250	-10	c.35- others(27): Show c.35-12896_35-12887delGTGTATATAT	ATL1	ENSG00000198513.14	transcript	ENST00000358385.12	protein_coding	1/13		INFO_REALIGN_3_PRIME	chr14	TogoVar
ATL1_chr14_50555145_50638045	50574937	GTATATAT others(3): Show GTATATATATA	G G	intron_variant intron_variant	MODIFIER	NA19043.hp1 NA19043.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0073 a0001c0001t0001g0073	1	320	0.0031	-10	c.35- others(27): Show c.35-12864_35-12855delATATATATAT	ATL1	ENSG00000198513.14	transcript	ENST00000358385.12	protein_coding	1/13		INFO_REALIGN_3_PRIME	chr14	TogoVar
ATL1_chr14_50555145_50638045	50610005	CCTCTGCC others(3): Show CCTCTGCCCCA	C C	intron_variant intron_variant	MODIFIER	HG00438.hp2 NA18998.hp1 NA18999.hp1 others(2): Show HG00438.hp2 NA18998.hp1 NA18999.hp1 NA19001.hp1 NA19088.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0093 a0001c0001t0001g0102 a0001c0001t0001g0120 others(2): Show a0001c0001t0001g0093 a0001c0001t0001g0102 a0001c0001t0001g0120 a0001c0001t0001g0121 a0001c0001t0001g0235	5	320	0.0156	-10	c.631 others(27): Show c.631-3242_631-3233delTCTGCCCCAC	ATL1	ENSG00000198513.14	transcript	ENST00000358385.12	protein_coding	6/13		INFO_REALIGN_3_PRIME	chr14	TogoVar
ATL2_chr2_38288954_38382273	38325627	TACACACA others(3): Show TACACACACAC	T T	intron_variant intron_variant	MODIFIER	HG01516.hp1 HG01516.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0005 a0002c0002t0005	a0002c0002t0005g0156 a0002c0002t0005g0156	1	236	0.0042	-10	c.364 others(27): Show c.364-6618_364-6609delGTGTGTGTGT	ATL2	ENSG00000119787.14	transcript	ENST00000378954.9	protein_coding	2/12			chr2	TogoVar
ATL2_chr2_38288954_38382273	38325661	TACACACA others(3): Show TACACACACAC	T T	intron_variant intron_variant	MODIFIER	NA18998.hp1 NA18998.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0005 a0002c0002t0005	a0002c0002t0005g0206 a0002c0002t0005g0206	1	236	0.0042	-10	c.364 others(27): Show c.364-6652_364-6643delGTGTGTGTGT	ATL2	ENSG00000119787.14	transcript	ENST00000378954.9	protein_coding	2/12			chr2	TogoVar
ATL2_chr2_38288954_38382273	38325689	CACACACC others(3): Show CACACACCAGT	C C	intron_variant intron_variant	MODIFIER	NA18984.hp2 NA18984.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0121 a0001c0001t0002g0121	1	236	0.0042	-10	c.364 others(27): Show c.364-6680_364-6671delACTGGTGTGT	ATL2	ENSG00000119787.14	transcript	ENST00000378954.9	protein_coding	2/12			chr2	TogoVar
ATL2_chr2_38288954_38382273	38325699	TACACACA others(3): Show TACACACACAC	T T	intron_variant intron_variant	MODIFIER	HG02257.hp2 HG02257.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0007 a0002c0002t0007	a0002c0002t0007g0221 a0002c0002t0007g0221	1	236	0.0042	-10	c.364 others(27): Show c.364-6690_364-6681delGTGTGTGTGT	ATL2	ENSG00000119787.14	transcript	ENST00000378954.9	protein_coding	2/12			chr2	TogoVar
ATL2_chr2_38288954_38382273	38325901	TTGTTTAA others(3): Show TTGTTTAAAAA	T T	intron_variant intron_variant	MODIFIER	HG02257.hp1 HG02622.hp1 HG03516.hp1 HG02257.hp1 HG02622.hp1 HG03516.hp1	a0001 a0005 a0001 a0005	a0001c0001 a0001c0003 a0005c0009 a0001c0001 a0001c0003 a0005c0009	a0001c0001t0018 a0001c0003t0019 a0005c0009t0020 a0001c0001t0018 a0001c0003t0019 a0005c0009t0020	a0001c0001t0018g0099 a0001c0003t0019g0095 a0005c0009t0020g0005 a0001c0001t0018g0099 a0001c0003t0019g0095 a0005c0009t0020g0005	3	236	0.0127	-10	c.364 others(27): Show c.364-6892_364-6883delTTTTTAAACA	ATL2	ENSG00000119787.14	transcript	ENST00000378954.9	protein_coding	2/12			chr2	TogoVar
ATL2_chr2_38288954_38382273	38325902	TGTTTAAA others(3): Show TGTTTAAAAAA	T T	intron_variant intron_variant	MODIFIER	HG02809.hp2 HG02895.hp2 HG02897.hp1 others(1): Show HG02809.hp2 HG02895.hp2 HG02897.hp1 HG03139.hp2	a0003 a0003	a0003c0004 a0003c0004	a0003c0004t0003 a0003c0004t0021 a0003c0004t0026 others(1): Show a0003c0004t0003 a0003c0004t0021 a0003c0004t0026 a0003c0004t0027	a0003c0004t0003g0029 a0003c0004t0021g0032 a0003c0004t0026g0030 others(1): Show a0003c0004t0003g0029 a0003c0004t0021g0032 a0003c0004t0026g0030 a0003c0004t0027g0031	4	236	0.0170	-10	c.364 others(27): Show c.364-6893_364-6884delTTTTTTAAAC	ATL2	ENSG00000119787.14	transcript	ENST00000378954.9	protein_coding	2/12			chr2	TogoVar
ATL2_chr2_38288954_38382273	38370162	AAAAAAAA others(3): Show AAAAAAAAAAG	A A	intron_variant intron_variant	MODIFIER	HG01496.hp2 HG03831.hp2 HG01496.hp2 HG03831.hp2	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0004 a0001c0003t0013 a0001c0003t0004 a0001c0003t0013	a0001c0003t0004g0131 a0001c0003t0013g0003 a0001c0003t0004g0131 a0001c0003t0013g0003	2	236	0.0085	-10	c.118 others(27): Show c.118+6971_118+6980delCTTTTTTTTT	ATL2	ENSG00000119787.14	transcript	ENST00000378954.9	protein_coding	1/12			chr2	TogoVar
ATL3_chr11_63619087_63676376	63661578	AAAGAGAA others(3): Show AAAGAGAAGAG	A A	intron_variant intron_variant	MODIFIER	HG01496.hp2 HG02258.hp2 HG02723.hp2 others(1): Show HG01496.hp2 HG02258.hp2 HG02723.hp2 HG02809.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0010 a0001c0002t0010	a0001c0002t0010g0005 a0001c0002t0010g0016 a0001c0002t0010g0017 a0001c0002t0010g0005 a0001c0002t0010g0016 a0001c0002t0010g0017	4	242	0.0165	-10	c.47- others(25): Show c.47-2336_47-2327delCTCTTCTCTT	ATL3	ENSG00000184743.13	transcript	ENST00000398868.8	protein_coding	1/12			chr11	TogoVar
ATM_chr11_108218067_108374102	108282465	GTTGGAAA others(3): Show GTTGGAAACTC	G G	intron_variant intron_variant	MODIFIER	HG01175.hp1 HG02257.hp2 HG02922.hp1 others(1): Show HG01175.hp1 HG02257.hp2 HG02922.hp1 HG03453.hp2	a0009 a0023 a0009 a0023	a0009c0013 a0023c0033 a0009c0013 a0023c0033	a0009c0013t0012 a0023c0033t0012 a0009c0013t0012 a0023c0033t0012	a0009c0013t0012g0117 a0009c0013t0012g0119 a0009c0013t0012g0120 others(1): Show a0009c0013t0012g0117 a0009c0013t0012g0119 a0009c0013t0012g0120 a0023c0033t0012g0118	4	304	0.0132	-10	c.357 others(27): Show c.3577-242_3577-233delGGAAACTCTT	ATM	ENSG00000149311.21	transcript	ENST00000675843.1	protein_coding	24/62		INFO_REALIGN_3_PRIME	chr11	TogoVar
ATM_chr11_108218067_108374102	108317644	TATATATA others(3): Show TATATATATAC	T T	intron_variant intron_variant	MODIFIER	HG02615.hp2 HG02622.hp1 HG02615.hp2 HG02622.hp1	a0001 a0001	a0001c0010 a0001c0010	a0001c0010t0002 a0001c0010t0031 a0001c0010t0002 a0001c0010t0031	a0001c0010t0002g0053 a0001c0010t0031g0031 a0001c0010t0002g0053 a0001c0010t0031g0031	2	304	0.0066	-10	c.634 others(27): Show c.6347+125_6347+134delTATATATACA	ATM	ENSG00000149311.21	transcript	ENST00000675843.1	protein_coding	43/62		INFO_REALIGN_3_PRIME	chr11	TogoVar
ATM_chr11_108218067_108374102	108317646	TATATATA others(3): Show TATATATACAC	T T	intron_variant intron_variant	MODIFIER	NA19077.hp1 NA19077.hp1	a0001 a0001	a0001c0012 a0001c0012	a0001c0012t0024 a0001c0012t0024	a0001c0012t0024g0300 a0001c0012t0024g0300	1	304	0.0033	-10	c.634 others(27): Show c.6347+127_6347+136delTATATACACA	ATM	ENSG00000149311.21	transcript	ENST00000675843.1	protein_coding	43/62		INFO_REALIGN_3_PRIME	chr11	TogoVar
ATM_chr11_108218067_108374102	108317648	TATATACA others(3): Show TATATACACAC	T T	intron_variant intron_variant	MODIFIER	HG02486.hp1 HG02647.hp2 HG03225.hp1 others(1): Show HG02486.hp1 HG02647.hp2 HG03225.hp1 HG06807.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0002c0005 a0001c0001 a0002c0002 a0002c0005	a0001c0001t0002 a0002c0002t0003 a0002c0005t0008 a0001c0001t0002 a0002c0002t0003 a0002c0005t0008	a0001c0001t0002g0088 a0001c0001t0002g0089 a0002c0002t0003g0136 others(1): Show a0001c0001t0002g0088 a0001c0001t0002g0089 a0002c0002t0003g0136 a0002c0005t0008g0095	4	304	0.0132	-10	c.634 others(27): Show c.6347+129_6347+138delTATACACACA	ATM	ENSG00000149311.21	transcript	ENST00000675843.1	protein_coding	43/62		INFO_REALIGN_3_PRIME	chr11	TogoVar
ATM_chr11_108218067_108374102	108354060	CACACACA others(3): Show CACACACACAA	C C	intron_variant intron_variant	MODIFIER	HG02602.hp1 HG02602.hp1	a0005 a0005	a0005c0006 a0005c0006	a0005c0006t0005 a0005c0006t0005	a0005c0006t0005g0173 a0005c0006t0005g0173	1	304	0.0033	-10	c.878 others(27): Show c.8786+190_8786+199delAACACACACA	ATM	ENSG00000149311.21	transcript	ENST00000675843.1	protein_coding	60/62		INFO_REALIGN_3_PRIME	chr11	TogoVar

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