Joint Open Genome and Omics Platform (JoGo)

Search by Variant

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Chr

Chromosome name (e.g., chr11).

Snpeff genename

Exact SnpEff gene name.

Sampleids

Target sampleid (e.g. HG02615).

Snpeff haplotype class

Haplotype-annotation class (e.g., ahapid, ahapid+chapid).

Snpeff annotation impact

Exact impact level (e.g., HIGH, MODERATE, LOW).

Snpeff annotation impact detail

Keyword match in SnpEff annotation.

Hapid

One or more haplotype IDs (comma-separated; e.g., a0001, a01, a0001c0001, a01c02, a1c2, a0001c0001t0005, a0001c0001t0005g0018).

Samplehapid

Sample haplotype IDs to include (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

No_hapid

Haplotype IDs to exclude (comma-separated; e.g., a0001, a0002, a0001c0001, a0001c0001t0005, a1, a01).

No_samplehapid

Sample haplotype IDs to exclude (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

Start

Start position (GRCh38).

End

End position (GRCh38).

Minac

Minimum alternate allele count (≥).

Maxac

Maximum alternate allele count (≤).

Minlen

Minimum variant length (≥).

Maxlen

Maximum variant length (≤).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	pos	ref	alt	annotation	impact	samples	ahapids	achapids	acthapids	actghapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
ATP9B_chr18_79064394_79383283	79376172	AACACACA others(3): Show AACACACACAC	A A	intron_variant intron_variant	MODIFIER	HG01106.hp2 HG01884.hp1 HG02572.hp2 others(1): Show HG01106.hp2 HG01884.hp1 HG02572.hp2 HG02818.hp2	a0001 a0001	a0001c0004 a0001c0037 a0001c0004 a0001c0037	a0001c0004t0003 a0001c0037t0003 a0001c0004t0003 a0001c0037t0003	a0001c0004t0003g0101 a0001c0004t0003g0102 a0001c0004t0003g0103 others(1): Show a0001c0004t0003g0101 a0001c0004t0003g0102 a0001c0004t0003g0103 a0001c0037t0003g0104	4	298	0.0134	-10	c.330 others(27): Show c.3307+780_3307+789delCACACACACA	ATP9B	ENSG00000166377.21	transcript	ENST00000426216.6	protein_coding	29/29		INFO_REALIGN_3_PRIME	chr18	TogoVar
ATPAF1_chr1_46627737_46673364	46628444	AAGACAAG others(3): Show AAGACAAGAAC	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01884.hp2 HG01884.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0152 a0001c0001t0001g0152	1	412	0.0024	-10	c.73 others(21): Show c.7322_*7331delGTTCTTGTCT	ATPAF1	ENSG00000123472.13	transcript	ENST00000574428.6	protein_coding		4292		chr1	TogoVar
ATPAF2_chr17_18013021_18044168	18017171	CAAAAAAA others(3): Show CAAAAAAAAAA	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	HG04199.hp2 HG04199.hp2	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0001 a0001c0003t0001	a0001c0003t0001g0209 a0001c0003t0001g0209	1	328	0.0031	-10	c.13 others(21): Show c.1368_*1377delTTTTTTTTTT	ATPAF2	ENSG00000171953.16	transcript	ENST00000474627.8	protein_coding		849		chr17	TogoVar
ATPAF2_chr17_18013021_18044168	18043467	CAGGTTAG others(3): Show CAGGTTAGAAT	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02135.hp2 HG02135.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0111 a0001c0001t0001g0111	1	328	0.0031	-10	c.-44 others(21): Show c.-4464_-4455delATTCTAACCT	ATPAF2	ENSG00000171953.16	transcript	ENST00000474627.8	protein_coding		4300		chr17	TogoVar
ATPSCKMT_chr5_10220507_10254888	10249897	TAAAAAAA others(3): Show TAAAAAAAAAA	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03195.hp2 HG03195.hp2	a0001 a0001	a0001c0004 a0001c0004	a0001c0004t0002 a0001c0004t0002	a0001c0004t0002g0016 a0001c0004t0002g0016	1	358	0.0028	-10	c.-34 others(17): Show c.-34_-25delTTTTTTTTTT	ATPSCKMT	ENSG00000150756.14	transcript	ENST00000511437.6	protein_coding		10		chr5	TogoVar
ATPSCKMT_chr5_10220507_10254888	10249925	AAAAAAAA others(3): Show AAAAAAAAAAC	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00621.hp1 HG00639.hp1 HG01071.hp1 others(18): Show HG00621.hp1 HG00639.hp1 HG01071.hp1 HG01258.hp1 HG02015.hp1 HG02273.hp1 HG02300.hp2 HG02895.hp2 HG03453.hp1 NA18949.hp1 NA18953.hp1 NA18960.hp2 NA18977.hp1 NA18978.hp1 NA18982.hp1 NA18989.hp1 NA18995.hp2 NA19076.hp1 NA19087.hp2 NA19240.hp1 NA21309.hp2	a0001 a0002 a0005 a0001 a0002 a0005	a0001c0002 a0001c0003 a0001c0004 others(3): Show a0001c0002 a0001c0003 a0001c0004 a0002c0001 a0002c0005 a0005c0009	a0001c0002t0002 a0001c0002t0003 a0001c0002t0004 others(6): Show a0001c0002t0002 a0001c0002t0003 a0001c0002t0004 a0001c0003t0002 a0001c0004t0002 a0002c0001t0001 a0002c0001t0003 a0002c0005t0006 a0005c0009t0001	a0001c0002t0002g0014 a0001c0002t0003g0030 a0001c0002t0004g0131 others(17): Show a0001c0002t0002g0014 a0001c0002t0003g0030 a0001c0002t0004g0131 a0001c0002t0004g0152 a0001c0003t0002g0063 a0001c0003t0002g0122 a0001c0004t0002g0161 a0002c0001t0001g0001 a0002c0001t0001g0002 a0002c0001t0001g0007 a0002c0001t0001g0037 a0002c0001t0001g0145 a0002c0001t0001g0156 a0002c0001t0001g0157 a0002c0001t0003g0137 a0002c0005t0006g0038 a0002c0005t0006g0060 a0002c0005t0006g0155 a0002c0005t0006g0160 a0005c0009t0001g0113	21	358	0.0587	-10	c.-62 others(17): Show c.-62_-53delGTTTTTTTTT	ATPSCKMT	ENSG00000150756.14	transcript	ENST00000511437.6	protein_coding		38		chr5	TogoVar
ATRAID_chr2_27207041_27222157	27221753	ATTTTTTT others(3): Show ATTTTTTTTTT	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	NA19009.hp1 NA19009.hp2 NA19009.hp1 NA19009.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0001	2	302	0.0066	-10	c.48 others(21): Show c.4806_*4815delTTTTTTTTTT	ATRAID	ENSG00000138085.18	transcript	ENST00000380171.9	protein_coding		4597		chr2	TogoVar
ATRIP_chr3_48441737_48472645	48452794	TAACCAAA others(3): Show TAACCAAAAGC	T T	intron_variant intron_variant	MODIFIER	NA18944.hp2 NA18944.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0059 a0001c0001t0002g0059	1	360	0.0028	-10	c.552 others(25): Show c.552+908_552+917delCCAAAAGCAA	ATRIP	ENSG00000164053.22	transcript	ENST00000320211.10	protein_coding	3/12		INFO_REALIGN_3_PRIME	chr3	TogoVar
ATRNL1_chr10_115088365_115953999	115098453	CTTTTTTT others(3): Show CTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG02615.hp2 HG02630.hp1 HG02818.hp1 others(1): Show HG02615.hp2 HG02630.hp1 HG02818.hp1 HG03041.hp2	a0001 a0001	a0001c0001 a0001c0006 a0001c0001 a0001c0006	a0001c0001t0008 a0001c0001t0016 a0001c0001t0017 others(1): Show a0001c0001t0008 a0001c0001t0016 a0001c0001t0017 a0001c0006t0013	a0001c0001t0008g0030 a0001c0001t0016g0031 a0001c0001t0017g0028 others(1): Show a0001c0001t0008g0030 a0001c0001t0016g0031 a0001c0001t0017g0028 a0001c0006t0013g0029	4	128	0.0313	-10	c.293 others(27): Show c.293+4427_293+4436delTTTTTTTTTT	ATRNL1	ENSG00000107518.18	transcript	ENST00000355044.8	protein_coding	1/28		INFO_REALIGN_3_PRIME	chr10	TogoVar
ATRNL1_chr10_115088365_115953999	115203577	CTTTTTTT others(3): Show CTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG00735.hp2 HG00738.hp2 HG01891.hp1 others(7): Show HG00735.hp2 HG00738.hp2 HG01891.hp1 HG02572.hp2 HG02622.hp2 HG02970.hp1 HG03486.hp2 HG03579.hp1 NA18522.hp1 NA19030.hp1	a0001 a0001	a0001c0001 a0001c0011 a0001c0015 a0001c0001 a0001c0011 a0001c0015	a0001c0001t0002 a0001c0001t0011 a0001c0001t0020 others(4): Show a0001c0001t0002 a0001c0001t0011 a0001c0001t0020 a0001c0001t0035 a0001c0001t0036 a0001c0011t0002 a0001c0015t0034	a0001c0001t0002g0111 a0001c0001t0002g0113 a0001c0001t0002g0114 others(7): Show a0001c0001t0002g0111 a0001c0001t0002g0113 a0001c0001t0002g0114 a0001c0001t0011g0112 a0001c0001t0011g0119 a0001c0001t0020g0115 a0001c0001t0035g0118 a0001c0001t0036g0117 a0001c0011t0002g0116 a0001c0015t0034g0110	10	128	0.0781	-10	c.134 others(31): Show c.1349-12109_1349-12100delTTTTTTTTTT	ATRNL1	ENSG00000107518.18	transcript	ENST00000355044.8	protein_coding	8/28		INFO_REALIGN_3_PRIME	chr10	TogoVar
ATRNL1_chr10_115088365_115953999	115230870	TGAGAGAG others(3): Show TGAGAGAGAGA	T T	intron_variant intron_variant	MODIFIER	HG01071.hp2 NA19070.hp2 HG01071.hp2 NA19070.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0002c0014 a0001c0001 a0002c0014	a0001c0001t0001 a0002c0014t0009 a0001c0001t0001 a0002c0014t0009	a0001c0001t0001g0070 a0002c0014t0009g0072 a0001c0001t0001g0070 a0002c0014t0009g0072	2	128	0.0156	-10	c.153 others(31): Show c.1533-10658_1533-10649delGAGAGAGAGA	ATRNL1	ENSG00000107518.18	transcript	ENST00000355044.8	protein_coding	9/28		INFO_REALIGN_3_PRIME	chr10	TogoVar
ATRNL1_chr10_115088365_115953999	115230913	GAGAGAGA others(3): Show GAGAGAGAGAA	G G	intron_variant intron_variant	MODIFIER	HG00738.hp2 HG02895.hp1 HG00738.hp2 HG02895.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0002c0004 a0001c0001 a0002c0004	a0001c0001t0020 a0002c0004t0012 a0001c0001t0020 a0002c0004t0012	a0001c0001t0020g0115 a0002c0004t0012g0025 a0001c0001t0020g0115 a0002c0004t0012g0025	2	128	0.0156	-10	c.153 others(31): Show c.1533-10650_1533-10641delGAAAGAGAGA	ATRNL1	ENSG00000107518.18	transcript	ENST00000355044.8	protein_coding	9/28		INFO_REALIGN_3_PRIME	chr10	TogoVar
ATRNL1_chr10_115088365_115953999	115323402	TCCCTCCC others(3): Show TCCCTCCCCTC	T T	intron_variant intron_variant	MODIFIER	HG00639.hp2 HG02717.hp1 HG02723.hp2 others(5): Show HG00639.hp2 HG02717.hp1 HG02723.hp2 HG02896.hp1 HG02897.hp2 HG02976.hp1 HG03139.hp2 NA19030.hp2	a0001 a0001	a0001c0005 a0001c0007 a0001c0005 a0001c0007	a0001c0005t0007 a0001c0005t0018 a0001c0005t0021 others(3): Show a0001c0005t0007 a0001c0005t0018 a0001c0005t0021 a0001c0005t0032 a0001c0007t0027 a0001c0007t0030	a0001c0005t0007g0002 a0001c0005t0007g0004 a0001c0005t0007g0009 others(5): Show a0001c0005t0007g0002 a0001c0005t0007g0004 a0001c0005t0007g0009 a0001c0005t0018g0003 a0001c0005t0021g0007 a0001c0005t0032g0005 a0001c0007t0027g0006 a0001c0007t0030g0008	8	128	0.0625	-10	c.303 others(29): Show c.3037+7696_3037+7705delCCCCTCCCCT	ATRNL1	ENSG00000107518.18	transcript	ENST00000355044.8	protein_coding	18/28		INFO_REALIGN_3_PRIME	chr10	TogoVar
ATRNL1_chr10_115088365_115953999	115342405	CCCATTAT others(3): Show CCCATTATTTT	C C	intron_variant intron_variant	MODIFIER	HG01109.hp1 HG01109.hp1	a0002 a0002	a0002c0008 a0002c0008	a0002c0008t0044 a0002c0008t0044	a0002c0008t0044g0063 a0002c0008t0044g0063	1	128	0.0078	-10	c.317 others(29): Show c.3175+7987_3175+7996delCCATTATTTT	ATRNL1	ENSG00000107518.18	transcript	ENST00000355044.8	protein_coding	19/28			chr10	TogoVar
ATRNL1_chr10_115088365_115953999	115351742	GTGTTTTG others(3): Show GTGTTTTGTTT	G G	intron_variant intron_variant	MODIFIER	NA18957.hp2 NA18957.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0105 a0001c0001t0001g0105	1	128	0.0078	-10	c.317 others(31): Show c.3175+17344_3175+17353delTGTTTTGTTT	ATRNL1	ENSG00000107518.18	transcript	ENST00000355044.8	protein_coding	19/28		INFO_REALIGN_3_PRIME	chr10	TogoVar
ATRNL1_chr10_115088365_115953999	115389540	GTATATAT others(3): Show GTATATATATA	G G	intron_variant intron_variant	MODIFIER	HG01891.hp2 NA18994.hp2 NA18995.hp2 others(1): Show HG01891.hp2 NA18994.hp2 NA18995.hp2 NA19011.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0006 a0001c0001t0023 a0001c0001t0001 a0001c0001t0006 a0001c0001t0023	a0001c0001t0001g0055 a0001c0001t0001g0125 a0001c0001t0006g0109 others(1): Show a0001c0001t0001g0055 a0001c0001t0001g0125 a0001c0001t0006g0109 a0001c0001t0023g0022	4	128	0.0313	-10	c.317 others(29): Show c.3176-5077_3176-5068delATATATATAT	ATRNL1	ENSG00000107518.18	transcript	ENST00000355044.8	protein_coding	19/28		INFO_REALIGN_3_PRIME	chr10	TogoVar
ATRNL1_chr10_115088365_115953999	115407985	CTTTTTTT others(3): Show CTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG02055.hp1 HG02622.hp1 HG03471.hp2 HG02055.hp1 HG02622.hp1 HG03471.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0010 a0001c0001t0022 a0001c0001t0010 a0001c0001t0022	a0001c0001t0010g0033 a0001c0001t0010g0034 a0001c0001t0022g0032 a0001c0001t0010g0033 a0001c0001t0010g0034 a0001c0001t0022g0032	3	128	0.0234	-10	c.326 others(31): Show c.3269+13253_3269+13262delTTTTTTTTTT	ATRNL1	ENSG00000107518.18	transcript	ENST00000355044.8	protein_coding	20/28		INFO_REALIGN_3_PRIME	chr10	TogoVar
ATRNL1_chr10_115088365_115953999	115445506	CGTGTGTG others(3): Show CGTGTGTGTGT	C C	intron_variant intron_variant	MODIFIER	HG02559.hp2 HG03139.hp1 NA18906.hp2 HG02559.hp2 HG03139.hp1 NA18906.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0010 a0001c0001t0019 a0001c0001t0024 a0001c0001t0010 a0001c0001t0019 a0001c0001t0024	a0001c0001t0010g0018 a0001c0001t0019g0020 a0001c0001t0024g0024 a0001c0001t0010g0018 a0001c0001t0019g0020 a0001c0001t0024g0024	3	128	0.0234	-10	c.332 others(31): Show c.3323-16398_3323-16389delGTGTGTGTGT	ATRNL1	ENSG00000107518.18	transcript	ENST00000355044.8	protein_coding	21/28		INFO_REALIGN_3_PRIME	chr10	TogoVar
ATRNL1_chr10_115088365_115953999	115459552	AATAAATT others(3): Show AATAAATTTTG	A A	intron_variant intron_variant	MODIFIER	HG03041.hp1 HG03041.hp1	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0003 a0001c0003t0003	a0001c0003t0003g0060 a0001c0003t0003g0060	1	128	0.0078	-10	c.332 others(29): Show c.3323-2388_3323-2379delATAAATTTTG	ATRNL1	ENSG00000107518.18	transcript	ENST00000355044.8	protein_coding	21/28			chr10	TogoVar
ATRNL1_chr10_115088365_115953999	115577610	TTGTGTGT others(3): Show TTGTGTGTGTG	T T	intron_variant intron_variant	MODIFIER	HG03041.hp1 NA18906.hp1 HG03041.hp1 NA18906.hp1	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0003 a0001c0003t0031 a0001c0003t0003 a0001c0003t0031	a0001c0003t0003g0060 a0001c0003t0031g0016 a0001c0003t0003g0060 a0001c0003t0031g0016	2	128	0.0156	-10	c.379 others(31): Show c.3795+28108_3795+28117delGTGTGTGTGT	ATRNL1	ENSG00000107518.18	transcript	ENST00000355044.8	protein_coding	26/28		INFO_REALIGN_3_PRIME	chr10	TogoVar
ATRNL1_chr10_115088365_115953999	115584175	GCATCAAT others(3): Show GCATCAATGTT	G G	intron_variant intron_variant	MODIFIER	HG03139.hp2 HG03139.hp2	a0001 a0001	a0001c0005 a0001c0005	a0001c0005t0021 a0001c0005t0021	a0001c0005t0021g0007 a0001c0005t0021g0007	1	128	0.0078	-10	c.379 others(31): Show c.3795+34646_3795+34655delTGTTCATCAA	ATRNL1	ENSG00000107518.18	transcript	ENST00000355044.8	protein_coding	26/28		INFO_REALIGN_3_PRIME	chr10	TogoVar
ATRNL1_chr10_115088365_115953999	115615266	TTTAAATA others(3): Show TTTAAATAATA	T T	intron_variant intron_variant	MODIFIER	HG02258.hp2 HG02258.hp2	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0045 a0001c0003t0045	a0001c0003t0045g0090 a0001c0003t0045g0090	1	128	0.0078	-10	c.379 others(31): Show c.3795+65732_3795+65741delTAAATAATAT	ATRNL1	ENSG00000107518.18	transcript	ENST00000355044.8	protein_coding	26/28		INFO_REALIGN_3_PRIME	chr10	TogoVar
ATRNL1_chr10_115088365_115953999	115621305	AGAGAGAG others(3): Show AGAGAGAGAGT	A A	intron_variant intron_variant	MODIFIER	HG02717.hp2 HG02717.hp2	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0001 a0001c0003t0001	a0001c0003t0001g0083 a0001c0003t0001g0083	1	128	0.0078	-10	c.379 others(31): Show c.3795+71771_3795+71780delAGAGAGAGTG	ATRNL1	ENSG00000107518.18	transcript	ENST00000355044.8	protein_coding	26/28		INFO_REALIGN_3_PRIME	chr10	TogoVar
ATRNL1_chr10_115088365_115953999	115630827	TACACACA others(3): Show TACACACACAC	T T	intron_variant intron_variant	MODIFIER	HG00741.hp2 HG01123.hp1 HG01952.hp1 others(8): Show HG00741.hp2 HG01123.hp1 HG01952.hp1 HG02135.hp1 HG02300.hp1 HG02572.hp1 HG03540.hp1 NA18906.hp1 NA18959.hp1 NA18995.hp2 NA20752.hp1	a0001 a0001	a0001c0001 a0001c0003 a0001c0016 a0001c0001 a0001c0003 a0001c0016	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(3): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0048 a0001c0003t0031 a0001c0016t0003	a0001c0001t0001g0036 a0001c0001t0001g0065 a0001c0001t0001g0068 others(8): Show a0001c0001t0001g0036 a0001c0001t0001g0065 a0001c0001t0001g0068 a0001c0001t0001g0096 a0001c0001t0001g0125 a0001c0001t0002g0017 a0001c0001t0003g0066 a0001c0001t0003g0092 a0001c0001t0048g0107 a0001c0003t0031g0016 a0001c0016t0003g0097	11	128	0.0859	-10	c.379 others(31): Show c.3795+81329_3795+81338delCACACACACA	ATRNL1	ENSG00000107518.18	transcript	ENST00000355044.8	protein_coding	26/28		INFO_REALIGN_3_PRIME	chr10	TogoVar
ATRNL1_chr10_115088365_115953999	115713443	CTGTGTGT others(3): Show CTGTGTGTGTG	C C	intron_variant intron_variant	MODIFIER	HG02615.hp2 HG02615.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0016 a0001c0001t0016	a0001c0001t0016g0031 a0001c0001t0016g0031	1	128	0.0078	-10	c.379 others(31): Show c.3796-13791_3796-13782delGTGTGTGTGT	ATRNL1	ENSG00000107518.18	transcript	ENST00000355044.8	protein_coding	26/28		INFO_REALIGN_3_PRIME	chr10	TogoVar
ATRNL1_chr10_115088365_115953999	115740845	CACACACA others(3): Show CACACACACAA	C C	intron_variant intron_variant	MODIFIER	HG02818.hp1 HG02818.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0008 a0001c0001t0008	a0001c0001t0008g0030 a0001c0001t0008g0030	1	128	0.0078	-10	c.390 others(31): Show c.3903+13500_3903+13509delAACACACACA	ATRNL1	ENSG00000107518.18	transcript	ENST00000355044.8	protein_coding	27/28		INFO_REALIGN_3_PRIME	chr10	TogoVar
ATRNL1_chr10_115088365_115953999	115802021	AACACACA others(3): Show AACACACACAC	A A	intron_variant intron_variant	MODIFIER	HG01515.hp2 HG02132.hp1 HG02523.hp2 HG01515.hp2 HG02132.hp1 HG02523.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0001 a0001c0001t0002	a0001c0001t0001g0120 a0001c0001t0002g0080 a0001c0001t0002g0123 a0001c0001t0001g0120 a0001c0001t0002g0080 a0001c0001t0002g0123	3	128	0.0234	-10	c.390 others(31): Show c.3904-45840_3904-45831delCACACACACA	ATRNL1	ENSG00000107518.18	transcript	ENST00000355044.8	protein_coding	27/28		INFO_REALIGN_3_PRIME	chr10	TogoVar
ATRNL1_chr10_115088365_115953999	115815415	ATGTGTGT others(3): Show ATGTGTGTGTG	A A	intron_variant intron_variant	MODIFIER	HG03209.hp1 HG03209.hp1	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0047 a0001c0003t0047	a0001c0003t0047g0128 a0001c0003t0047g0128	1	128	0.0078	-10	c.390 others(31): Show c.3904-32434_3904-32425delGTGTGTGTGT	ATRNL1	ENSG00000107518.18	transcript	ENST00000355044.8	protein_coding	27/28		INFO_REALIGN_3_PRIME	chr10	TogoVar
ATRNL1_chr10_115088365_115953999	115828322	AAAAAGAA others(3): Show AAAAAGAAAAG	A A	intron_variant intron_variant	MODIFIER	HG00738.hp2 HG02145.hp2 HG02559.hp1 HG00738.hp2 HG02145.hp2 HG02559.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0013 a0001c0001t0020 a0001c0001t0002 a0001c0001t0013 a0001c0001t0020	a0001c0001t0002g0015 a0001c0001t0013g0019 a0001c0001t0020g0115 a0001c0001t0002g0015 a0001c0001t0013g0019 a0001c0001t0020g0115	3	128	0.0234	-10	c.390 others(31): Show c.3904-19536_3904-19527delAGAAAAGAAA	ATRNL1	ENSG00000107518.18	transcript	ENST00000355044.8	protein_coding	27/28		INFO_REALIGN_3_PRIME	chr10	TogoVar
ATRNL1_chr10_115088365_115953999	115837466	CCACACAC others(3): Show CCACACACACA	C C	intron_variant intron_variant	MODIFIER	HG02630.hp2 HG02630.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0006 a0001c0002t0006	a0001c0002t0006g0086 a0001c0002t0006g0086	1	128	0.0078	-10	c.390 others(31): Show c.3904-10359_3904-10350delACACACACAC	ATRNL1	ENSG00000107518.18	transcript	ENST00000355044.8	protein_coding	27/28		INFO_REALIGN_3_PRIME	chr10	TogoVar
ATRNL1_chr10_115088365_115953999	115868822	CTTTTTTT others(3): Show CTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG01891.hp1 HG02258.hp1 HG03209.hp2 others(1): Show HG01891.hp1 HG02258.hp1 HG03209.hp2 HG03579.hp1	a0001 a0001	a0001c0001 a0001c0003 a0001c0001 a0001c0003	a0001c0001t0001 a0001c0001t0002 a0001c0001t0036 others(1): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0036 a0001c0003t0037	a0001c0001t0001g0085 a0001c0001t0002g0111 a0001c0001t0036g0117 others(1): Show a0001c0001t0001g0085 a0001c0001t0002g0111 a0001c0001t0036g0117 a0001c0003t0037g0121	4	128	0.0313	-10	c.401 others(31): Show c.4018+20847_4018+20856delTTTTTTTTTT	ATRNL1	ENSG00000107518.18	transcript	ENST00000355044.8	protein_coding	28/28		INFO_REALIGN_3_PRIME	chr10	TogoVar
ATRNL1_chr10_115088365_115953999	115871469	TTGTGTGT others(3): Show TTGTGTGTGTG	T T	intron_variant intron_variant	MODIFIER	HG01109.hp1 HG02055.hp1 HG03041.hp1 others(3): Show HG01109.hp1 HG02055.hp1 HG03041.hp1 HG03195.hp2 HG03471.hp2 NA18522.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0001c0003 a0002c0008 a0001c0001 a0001c0003 a0002c0008	a0001c0001t0010 a0001c0001t0043 a0001c0003t0003 others(2): Show a0001c0001t0010 a0001c0001t0043 a0001c0003t0003 a0001c0003t0041 a0002c0008t0044	a0001c0001t0010g0033 a0001c0001t0010g0034 a0001c0001t0043g0094 others(3): Show a0001c0001t0010g0033 a0001c0001t0010g0034 a0001c0001t0043g0094 a0001c0003t0003g0060 a0001c0003t0041g0047 a0002c0008t0044g0063	6	128	0.0469	-10	c.401 others(31): Show c.4018+23480_4018+23489delGTGTGTGTGT	ATRNL1	ENSG00000107518.18	transcript	ENST00000355044.8	protein_coding	28/28		INFO_REALIGN_3_PRIME	chr10	TogoVar
ATRNL1_chr10_115088365_115953999	115887287	CTATTACA others(3): Show CTATTACAAAA	C C	intron_variant intron_variant	MODIFIER	HG02280.hp1 HG02976.hp2 HG03041.hp1 others(1): Show HG02280.hp1 HG02976.hp2 HG03041.hp1 HG03453.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0001c0003 a0002c0004 a0001c0001 a0001c0003 a0002c0004	a0001c0001t0007 a0001c0003t0003 a0001c0003t0039 others(1): Show a0001c0001t0007 a0001c0003t0003 a0001c0003t0039 a0002c0004t0007	a0001c0001t0007g0027 a0001c0003t0003g0060 a0001c0003t0039g0126 others(1): Show a0001c0001t0007g0027 a0001c0003t0003g0060 a0001c0003t0039g0126 a0002c0004t0007g0011	4	128	0.0313	-10	c.401 others(31): Show c.4018+39310_4018+39319delTACAAAATAT	ATRNL1	ENSG00000107518.18	transcript	ENST00000355044.8	protein_coding	28/28		INFO_REALIGN_3_PRIME	chr10	TogoVar
ATRNL1_chr10_115088365_115953999	115953633	CTCTAAAC others(3): Show CTCTAAACAAT	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00639.hp1 HG00639.hp2 HG01123.hp1 others(27): Show HG00639.hp1 HG00639.hp2 HG01123.hp1 HG01361.hp2 HG01952.hp1 HG02015.hp2 HG02055.hp1 HG02135.hp2 HG02145.hp1 HG02280.hp1 HG02523.hp1 HG03139.hp2 HG03209.hp1 HG03471.hp2 HG03834.hp2 NA18522.hp2 NA18957.hp1 NA18957.hp2 NA18959.hp2 NA18994.hp1 NA18995.hp1 NA18995.hp2 NA19003.hp2 NA19011.hp1 NA19011.hp2 NA19030.hp1 NA19030.hp2 NA19043.hp2 NA19070.hp1 NA20752.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0001c0002 a0001c0003 others(4): Show a0001c0001 a0001c0002 a0001c0003 a0001c0005 a0001c0006 a0001c0012 a0002c0004	a0001c0001t0001 a0001c0001t0002 a0001c0001t0006 others(14): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0006 a0001c0001t0010 a0001c0001t0011 a0001c0001t0029 a0001c0002t0001 a0001c0002t0004 a0001c0002t0028 a0001c0003t0041 a0001c0003t0047 a0001c0005t0007 a0001c0005t0021 a0001c0005t0032 a0001c0006t0033 a0001c0012t0001 a0002c0004t0007	a0001c0001t0001g0036 a0001c0001t0001g0055 a0001c0001t0001g0065 others(27): Show a0001c0001t0001g0036 a0001c0001t0001g0055 a0001c0001t0001g0065 a0001c0001t0001g0091 a0001c0001t0001g0096 a0001c0001t0001g0105 a0001c0001t0001g0125 a0001c0001t0002g0077 a0001c0001t0006g0100 a0001c0001t0010g0033 a0001c0001t0010g0034 a0001c0001t0011g0119 a0001c0001t0029g0075 a0001c0002t0001g0045 a0001c0002t0001g0103 a0001c0002t0004g0039 a0001c0002t0004g0040 a0001c0002t0004g0054 a0001c0002t0004g0056 a0001c0002t0004g0067 a0001c0002t0004g0127 a0001c0002t0028g0076 a0001c0003t0041g0047 a0001c0003t0047g0128 a0001c0005t0007g0002 a0001c0005t0021g0007 a0001c0005t0032g0005 a0001c0006t0033g0035 a0001c0012t0001g0071 a0002c0004t0007g0011	30	128	0.2344	-10	c.88 others(21): Show c.8855_*8864delTCTAAACAAT	ATRNL1	ENSG00000107518.18	transcript	ENST00000355044.8	protein_coding		4635		chr10	TogoVar
ATRN_chr20_3466018_3656118	3480352	AGGCCATA others(3): Show AGGCCATAATG	A A	intron_variant intron_variant	MODIFIER	HG03471.hp2 HG03471.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0008 a0001c0002t0008	a0001c0002t0008g0035 a0001c0002t0008g0035	1	220	0.0046	-10	c.410 others(27): Show c.410+8836_410+8845delGGCCATAATG	ATRN	ENSG00000088812.18	transcript	ENST00000262919.10	protein_coding	1/28			chr20	TogoVar
ATRN_chr20_3466018_3656118	3485610	GTTTTTTT others(3): Show GTTTTTTTTTT	G G	intron_variant intron_variant	MODIFIER	HG03516.hp1 HG03710.hp1 HG03710.hp2 others(1): Show HG03516.hp1 HG03710.hp1 HG03710.hp2 NA18985.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0001t0012 a0001c0002t0003 a0001c0001t0001 a0001c0001t0012 a0001c0002t0003	a0001c0001t0001g0016 a0001c0001t0001g0125 a0001c0001t0012g0133 others(1): Show a0001c0001t0001g0016 a0001c0001t0001g0125 a0001c0001t0012g0133 a0001c0002t0003g0045	4	220	0.0182	-10	c.410 others(29): Show c.410+14113_410+14122delTTTTTTTTTT	ATRN	ENSG00000088812.18	transcript	ENST00000262919.10	protein_coding	1/28		INFO_REALIGN_3_PRIME	chr20	TogoVar
ATRN_chr20_3466018_3656118	3493122	TTGTGTGT others(3): Show TTGTGTGTGTG	T T	intron_variant intron_variant	MODIFIER	HG00140.hp2 HG00733.hp2 HG00735.hp1 others(14): Show HG00140.hp2 HG00733.hp2 HG00735.hp1 HG00738.hp1 HG01081.hp1 HG01106.hp2 HG01123.hp2 HG01175.hp1 HG01261.hp2 HG01515.hp1 HG01517.hp1 HG01943.hp1 HG02055.hp1 HG02886.hp1 HG03041.hp2 HG03225.hp2 NA20805.hp2	a0001 a0010 a0001 a0010	a0001c0003 a0001c0005 a0001c0006 others(2): Show a0001c0003 a0001c0005 a0001c0006 a0001c0007 a0010c0023	a0001c0003t0005 a0001c0003t0007 a0001c0005t0007 others(5): Show a0001c0003t0005 a0001c0003t0007 a0001c0005t0007 a0001c0005t0038 a0001c0006t0004 a0001c0006t0020 a0001c0007t0003 a0010c0023t0007	a0001c0003t0005g0178 a0001c0003t0005g0190 a0001c0003t0007g0179 others(14): Show a0001c0003t0005g0178 a0001c0003t0005g0190 a0001c0003t0007g0179 a0001c0003t0007g0187 a0001c0003t0007g0188 a0001c0005t0007g0181 a0001c0005t0007g0183 a0001c0005t0007g0184 a0001c0005t0007g0191 a0001c0005t0007g0192 a0001c0005t0038g0189 a0001c0006t0004g0177 a0001c0006t0004g0186 a0001c0006t0020g0180 a0001c0007t0003g0185 a0001c0007t0003g0193 a0010c0023t0007g0182	17	220	0.0773	-10	c.410 others(29): Show c.410+21623_410+21632delGTGTGTGTGT	ATRN	ENSG00000088812.18	transcript	ENST00000262919.10	protein_coding	1/28		INFO_REALIGN_3_PRIME	chr20	TogoVar
ATRN_chr20_3466018_3656118	3535588	TACACACA others(3): Show TACACACACAC	T T	intron_variant intron_variant	MODIFIER	NA18952.hp2 NA18985.hp1 NA19075.hp1 others(1): Show NA18952.hp2 NA18985.hp1 NA19075.hp1 NA19081.hp1	a0001 a0017 a0001 a0017	a0001c0007 a0017c0032 a0001c0007 a0017c0032	a0001c0007t0006 a0017c0032t0001 a0001c0007t0006 a0017c0032t0001	a0001c0007t0006g0201 a0001c0007t0006g0202 a0001c0007t0006g0203 others(1): Show a0001c0007t0006g0201 a0001c0007t0006g0202 a0001c0007t0006g0203 a0017c0032t0001g0195	4	220	0.0182	-10	c.494 others(25): Show c.494+282_494+291delCACACACACA	ATRN	ENSG00000088812.18	transcript	ENST00000262919.10	protein_coding	2/28		INFO_REALIGN_3_PRIME	chr20	TogoVar
ATRN_chr20_3466018_3656118	3554990	CTTTTTTT others(3): Show CTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG03579.hp2 HG03579.hp2	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0002 a0001c0003t0002	a0001c0003t0002g0215 a0001c0003t0002g0215	1	220	0.0046	-10	c.111 others(29): Show c.1113-4382_1113-4373delTTTTTTTTTT	ATRN	ENSG00000088812.18	transcript	ENST00000262919.10	protein_coding	6/28		INFO_REALIGN_3_PRIME	chr20	TogoVar
ATRN_chr20_3466018_3656118	3565796	CAAAAAAA others(3): Show CAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG01884.hp1 HG01884.hp1	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0037 a0001c0003t0037	a0001c0003t0037g0194 a0001c0003t0037g0194	1	220	0.0046	-10	c.187 others(27): Show c.1871+379_1871+388delAAAAAAAAAA	ATRN	ENSG00000088812.18	transcript	ENST00000262919.10	protein_coding	11/28		INFO_REALIGN_3_PRIME	chr20	TogoVar
ATRN_chr20_3466018_3656118	3586887	CATCCTTG others(3): Show CATCCTTGCCA	C C	intron_variant intron_variant	MODIFIER	HG01884.hp1 HG01884.hp1	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0037 a0001c0003t0037	a0001c0003t0037g0194 a0001c0003t0037g0194	1	220	0.0046	-10	c.318 others(29): Show c.3184+2010_3184+2019delCCTTGCCAAT	ATRN	ENSG00000088812.18	transcript	ENST00000262919.10	protein_coding	18/28		INFO_REALIGN_3_PRIME	chr20	TogoVar
ATRN_chr20_3466018_3656118	3620219	AGTTTTGT others(3): Show AGTTTTGTTTT	A A	intron_variant intron_variant	MODIFIER	HG01884.hp2 HG02055.hp1 HG02451.hp2 others(17): Show HG01884.hp2 HG02055.hp1 HG02451.hp2 HG02486.hp2 HG02559.hp2 HG02615.hp2 HG02717.hp1 HG02886.hp1 HG02897.hp1 HG02965.hp1 HG02970.hp2 HG02976.hp1 HG03139.hp1 HG03225.hp1 HG03471.hp1 HG03486.hp2 HG03516.hp2 HG03540.hp1 HG03942.hp2 HG04199.hp1	a0001 a0002 a0004 others(4): Show a0001 a0002 a0004 a0005 a0007 a0009 a0011	a0001c0002 a0001c0006 a0001c0013 others(6): Show a0001c0002 a0001c0006 a0001c0013 a0002c0004 a0004c0011 a0005c0009 a0007c0015 a0009c0019 a0011c0022	a0001c0002t0004 a0001c0002t0017 a0001c0006t0004 others(8): Show a0001c0002t0004 a0001c0002t0017 a0001c0006t0004 a0001c0013t0017 a0002c0004t0004 a0002c0004t0016 a0004c0011t0004 a0005c0009t0004 a0007c0015t0004 a0009c0019t0004 a0011c0022t0004	a0001c0002t0004g0055 a0001c0002t0004g0097 a0001c0002t0004g0134 others(17): Show a0001c0002t0004g0055 a0001c0002t0004g0097 a0001c0002t0004g0134 a0001c0002t0017g0079 a0001c0006t0004g0177 a0001c0006t0004g0186 a0001c0013t0017g0149 a0002c0004t0004g0153 a0002c0004t0004g0154 a0002c0004t0004g0160 a0002c0004t0004g0162 a0002c0004t0016g0155 a0002c0004t0016g0156 a0004c0011t0004g0165 a0005c0009t0004g0006 a0005c0009t0004g0007 a0005c0009t0004g0008 a0007c0015t0004g0026 a0009c0019t0004g0210 a0011c0022t0004g0009	20	220	0.0909	-10	c.380 others(29): Show c.3802-4255_3802-4246delTTTTGTTTTG	ATRN	ENSG00000088812.18	transcript	ENST00000262919.10	protein_coding	24/28		INFO_REALIGN_3_PRIME	chr20	TogoVar
ATRN_chr20_3466018_3656118	3630916	CTTTTTTT others(3): Show CTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG03098.hp2 HG03130.hp1 NA18522.hp1 HG03098.hp2 HG03130.hp1 NA18522.hp1	a0002 a0015 a0002 a0015	a0002c0004 a0015c0021 a0002c0004 a0015c0021	a0002c0004t0011 a0015c0021t0034 a0002c0004t0011 a0015c0021t0034	a0002c0004t0011g0150 a0002c0004t0011g0151 a0015c0021t0034g0204 a0002c0004t0011g0150 a0002c0004t0011g0151 a0015c0021t0034g0204	3	220	0.0136	-10	c.386 others(29): Show c.3864-3356_3864-3347delTTTTTTTTTT	ATRN	ENSG00000088812.18	transcript	ENST00000262919.10	protein_coding	25/28		INFO_REALIGN_3_PRIME	chr20	TogoVar
ATRX_chrX_77499880_77791216	77506897	CTTTTTTT others(3): Show CTTTTTTTTTT	C C	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG03540.hp1 HG03540.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0020 a0001c0001t0020	a0001c0001t0020g0180 a0001c0001t0020g0180	1	218	0.0046	-10	c.14 others(21): Show c.1444_*1453delAAAAAAAAAA	ATRX	ENSG00000085224.23	transcript	ENST00000373344.11	protein_coding	35/35	1444		chrX	TogoVar
ATRX_chrX_77499880_77791216	77585583	CAAAAAAA others(3): Show CAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG01109.hp1 HG01975.hp2 HG02015.hp1 others(22): Show HG01109.hp1 HG01975.hp2 HG02015.hp1 HG02165.hp1 HG02257.hp2 HG02258.hp1 HG02280.hp1 HG02280.hp2 HG02717.hp1 HG02809.hp1 HG02922.hp1 HG02965.hp1 HG03942.hp1 HG04115.hp1 HG04204.hp1 NA18906.hp2 NA18948.hp1 NA18964.hp2 NA18965.hp1 NA18969.hp1 NA18970.hp1 NA18973.hp1 NA18984.hp1 NA19084.hp2 NA20805.hp1	a0001 a0002 a0005 others(1): Show a0001 a0002 a0005 a0006	a0001c0001 a0001c0010 a0002c0002 others(2): Show a0001c0001 a0001c0010 a0002c0002 a0005c0009 a0006c0008	a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 others(8): Show a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0010 a0001c0001t0018 a0001c0010t0006 a0002c0002t0001 a0002c0002t0002 a0002c0002t0003 a0005c0009t0010 a0006c0008t0003	a0001c0001t0002g0158 a0001c0001t0002g0178 a0001c0001t0003g0085 others(22): Show a0001c0001t0002g0158 a0001c0001t0002g0178 a0001c0001t0003g0085 a0001c0001t0003g0196 a0001c0001t0003g0201 a0001c0001t0003g0202 a0001c0001t0004g0185 a0001c0001t0004g0187 a0001c0001t0004g0188 a0001c0001t0004g0191 a0001c0001t0004g0192 a0001c0001t0004g0194 a0001c0001t0004g0205 a0001c0001t0004g0218 a0001c0001t0010g0083 a0001c0001t0018g0193 a0001c0010t0006g0197 a0002c0002t0001g0040 a0002c0002t0001g0044 a0002c0002t0001g0097 a0002c0002t0001g0109 a0002c0002t0002g0110 a0002c0002t0003g0177 a0005c0009t0010g0086 a0006c0008t0003g0203	25	218	0.1147	-10	c.621 others(29): Show c.6217+4241_6217+4250delTTTTTTTTTT	ATRX	ENSG00000085224.23	transcript	ENST00000373344.11	protein_coding	27/34			chrX	TogoVar
ATRX_chrX_77499880_77791216	77626028	CATATATA others(3): Show CATATATATAT	C C	intron_variant intron_variant	MODIFIER	HG00642.hp1 HG02080.hp1 HG02145.hp1 others(16): Show HG00642.hp1 HG02080.hp1 HG02145.hp1 HG02273.hp2 HG02615.hp1 HG02717.hp1 HG02922.hp1 HG03225.hp1 HG03239.hp1 HG03453.hp2 HG03486.hp1 HG04115.hp1 NA18959.hp1 NA18964.hp1 NA18973.hp2 NA18982.hp1 NA19005.hp1 NA19043.hp1 NA19240.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0001c0007 a0001c0010 others(1): Show a0001c0001 a0001c0007 a0001c0010 a0002c0002	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(8): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0005 a0001c0001t0006 a0001c0001t0021 a0001c0007t0005 a0001c0010t0006 a0002c0002t0001 a0002c0002t0002 a0002c0002t0006	a0001c0001t0001g0198 a0001c0001t0002g0123 a0001c0001t0002g0130 others(16): Show a0001c0001t0001g0198 a0001c0001t0002g0123 a0001c0001t0002g0130 a0001c0001t0002g0143 a0001c0001t0002g0173 a0001c0001t0003g0200 a0001c0001t0003g0201 a0001c0001t0005g0135 a0001c0001t0006g0179 a0001c0001t0021g0078 a0001c0007t0005g0079 a0001c0010t0006g0197 a0002c0002t0001g0010 a0002c0002t0001g0013 a0002c0002t0001g0035 a0002c0002t0001g0097 a0002c0002t0002g0012 a0002c0002t0002g0047 a0002c0002t0006g0207	19	218	0.0872	-10	c.513 others(29): Show c.5135-5506_5135-5497delATATATATAT	ATRX	ENSG00000085224.23	transcript	ENST00000373344.11	protein_coding	19/34			chrX	TogoVar
ATRX_chrX_77499880_77791216	77651217	CAAAAAAA others(3): Show CAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG00323.hp2 HG00323.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0149 a0001c0001t0001g0149	1	218	0.0046	-10	c.455 others(27): Show c.4557+887_4557+896delTTTTTTTTTT	ATRX	ENSG00000085224.23	transcript	ENST00000373344.11	protein_coding	15/34			chrX	TogoVar
ATRX_chrX_77499880_77791216	77659482	TACACACA others(3): Show TACACACACAC	T T	intron_variant intron_variant	MODIFIER	HG04204.hp1 NA19030.hp2 NA20129.hp1 HG04204.hp1 NA19030.hp2 NA20129.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0004 a0001c0001t0007 a0001c0001t0003 a0001c0001t0004 a0001c0001t0007	a0001c0001t0003g0138 a0001c0001t0004g0218 a0001c0001t0007g0066 a0001c0001t0003g0138 a0001c0001t0004g0218 a0001c0001t0007g0066	3	218	0.0138	-10	c.412 others(29): Show c.4121-2839_4121-2830delGTGTGTGTGT	ATRX	ENSG00000085224.23	transcript	ENST00000373344.11	protein_coding	12/34			chrX	TogoVar
ATRX_chrX_77499880_77791216	77667295	ATGTGTGT others(3): Show ATGTGTGTGTG	A A	intron_variant intron_variant	MODIFIER	HG01257.hp1 HG01257.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0001	a0002c0002t0001g0141 a0002c0002t0001g0141	1	218	0.0046	-10	c.381 others(29): Show c.3810-2527_3810-2518delCACACACACA	ATRX	ENSG00000085224.23	transcript	ENST00000373344.11	protein_coding	10/34			chrX	TogoVar
ATRX_chrX_77499880_77791216	77716110	ATTTTTTT others(3): Show ATTTTTTTTTT	A A	intron_variant intron_variant	MODIFIER	NA19240.hp1 NA20129.hp2 NA19240.hp1 NA20129.hp2	a0001 a0001	a0001c0001 a0001c0003 a0001c0001 a0001c0003	a0001c0001t0008 a0001c0003t0001 a0001c0001t0008 a0001c0003t0001	a0001c0001t0008g0005 a0001c0003t0001g0080 a0001c0001t0008g0005 a0001c0003t0001g0080	2	218	0.0092	-10	c.133 others(27): Show c.133+1011_133+1020delAAAAAAAAAA	ATRX	ENSG00000085224.23	transcript	ENST00000373344.11	protein_coding	2/34			chrX	TogoVar

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