Joint Open Genome and Omics Platform (JoGo)

Search by Variant

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Chr

Chromosome name (e.g., chr11).

Snpeff genename

Exact SnpEff gene name.

Sampleids

Target sampleid (e.g. HG02615).

Snpeff haplotype class

Haplotype-annotation class (e.g., ahapid, ahapid+chapid).

Snpeff annotation impact

Exact impact level (e.g., HIGH, MODERATE, LOW).

Snpeff annotation impact detail

Keyword match in SnpEff annotation.

Hapid

One or more haplotype IDs (comma-separated; e.g., a0001, a01, a0001c0001, a01c02, a1c2, a0001c0001t0005, a0001c0001t0005g0018).

Samplehapid

Sample haplotype IDs to include (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

No_hapid

Haplotype IDs to exclude (comma-separated; e.g., a0001, a0002, a0001c0001, a0001c0001t0005, a1, a01).

No_samplehapid

Sample haplotype IDs to exclude (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

Start

Start position (GRCh38).

End

End position (GRCh38).

Minac

Minimum alternate allele count (≥).

Maxac

Maximum alternate allele count (≤).

Minlen

Minimum variant length (≥).

Maxlen

Maximum variant length (≤).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	pos	ref	alt	annotation	impact	samples	ahapids	achapids	acthapids	actghapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
BEX2_chrX_103304346_103315990	103309252	GTATATAT others(3): Show GTATATATATA	G G	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00423.hp2 HG00597.hp2 HG01928.hp1 others(16): Show HG00423.hp2 HG00597.hp2 HG01928.hp1 HG01975.hp2 HG02083.hp1 HG02293.hp1 HG02300.hp1 NA18951.hp1 NA18953.hp1 NA18959.hp1 NA18960.hp1 NA18967.hp1 NA18985.hp1 NA19058.hp1 NA19064.hp1 NA19080.hp1 NA19085.hp1 NA19087.hp1 NA19090.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0009 a0001c0001t0001 a0001c0001t0009	a0001c0001t0001g0001 a0001c0001t0009g0022 a0001c0001t0001g0001 a0001c0001t0009g0022	19	308	0.0617	-10	c.32 others(19): Show c.328_*337delTATATATATA	BEX2	ENSG00000133134.12	transcript	ENST00000372677.8	protein_coding		93		chrX	TogoVar
BEX5_chrX_102148712_102160977	102159119	CATGAGAA others(3): Show CATGAGAACAG	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	NA19075.hp1 NA19075.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0001	1	324	0.0031	-10	c.-33 others(21): Show c.-3375_-3366delCTGTTCTCAT	BEX5	ENSG00000184515.11	transcript	ENST00000333643.4	protein_coding		3143		chrX	TogoVar
BFSP1_chr20_17488905_17536379	17497571	TGTATATA others(3): Show TGTATATATAC	T T	intron_variant intron_variant	MODIFIER	HG00099.hp1 HG00408.hp1 HG00408.hp2 others(90): Show HG00099.hp1 HG00408.hp1 HG00408.hp2 HG00423.hp2 HG00438.hp1 HG00544.hp1 HG00544.hp2 HG00558.hp1 HG00609.hp2 HG00621.hp2 HG00639.hp1 HG00673.hp1 HG01081.hp1 HG01175.hp1 HG01257.hp1 HG01361.hp1 HG01496.hp1 HG01515.hp1 HG01517.hp2 HG01934.hp1 HG01943.hp1 HG01993.hp2 HG02074.hp1 HG02080.hp1 HG02083.hp1 HG02145.hp2 HG02148.hp1 HG02293.hp2 HG02486.hp1 HG02647.hp1 HG02647.hp2 HG02698.hp2 HG02717.hp2 HG02735.hp1 HG02895.hp1 HG02976.hp1 HG03017.hp2 HG03098.hp1 HG03130.hp1 HG03130.hp2 HG03139.hp1 HG03195.hp2 HG03540.hp2 HG03579.hp1 HG03669.hp1 HG03688.hp2 HG03704.hp1 HG03710.hp1 HG04204.hp1 HG04228.hp1 NA18522.hp2 NA18612.hp2 NA18906.hp1 NA18942.hp1 NA18945.hp2 NA18950.hp1 NA18952.hp1 NA18952.hp2 NA18954.hp1 NA18955.hp1 NA18955.hp2 NA18959.hp2 NA18962.hp2 NA18964.hp2 NA18974.hp1 NA18979.hp2 NA18981.hp1 NA18981.hp2 NA18988.hp2 NA18990.hp2 NA18994.hp1 NA18994.hp2 NA19001.hp1 NA19003.hp1 NA19006.hp1 NA19012.hp1 NA19056.hp2 NA19065.hp1 NA19065.hp2 NA19066.hp2 NA19067.hp1 NA19074.hp2 NA19078.hp1 NA19079.hp2 NA19082.hp2 NA19084.hp1 NA19086.hp2 NA19088.hp2 NA19090.hp1 NA20129.hp2 NA20300.hp1 NA20300.hp2 NA21309.hp2	a0001 a0006 a0007 others(1): Show a0001 a0006 a0007 a0009	a0001c0002 a0001c0003 a0001c0004 others(5): Show a0001c0002 a0001c0003 a0001c0004 a0001c0008 a0001c0017 a0006c0022 a0007c0016 a0009c0025	a0001c0002t0001 a0001c0003t0001 a0001c0003t0002 others(6): Show a0001c0002t0001 a0001c0003t0001 a0001c0003t0002 a0001c0004t0002 a0001c0008t0001 a0001c0017t0001 a0006c0022t0001 a0007c0016t0002 a0009c0025t0002	a0001c0002t0001g0029 a0001c0002t0001g0041 a0001c0002t0001g0060 others(90): Show a0001c0002t0001g0029 a0001c0002t0001g0041 a0001c0002t0001g0060 a0001c0002t0001g0061 a0001c0002t0001g0064 a0001c0002t0001g0067 a0001c0002t0001g0077 a0001c0002t0001g0080 a0001c0002t0001g0083 a0001c0002t0001g0089 a0001c0002t0001g0096 a0001c0002t0001g0104 a0001c0002t0001g0107 a0001c0002t0001g0124 a0001c0002t0001g0138 a0001c0002t0001g0153 a0001c0002t0001g0159 a0001c0002t0001g0160 a0001c0002t0001g0165 a0001c0002t0001g0168 a0001c0002t0001g0169 a0001c0002t0001g0174 a0001c0002t0001g0179 a0001c0002t0001g0184 a0001c0002t0001g0187 a0001c0002t0001g0188 a0001c0002t0001g0206 a0001c0002t0001g0216 a0001c0002t0001g0221 a0001c0002t0001g0223 a0001c0002t0001g0247 a0001c0002t0001g0252 a0001c0002t0001g0253 a0001c0002t0001g0260 a0001c0002t0001g0277 a0001c0002t0001g0302 a0001c0002t0001g0313 a0001c0002t0001g0315 a0001c0002t0001g0320 a0001c0002t0001g0334 a0001c0002t0001g0343 a0001c0002t0001g0345 a0001c0002t0001g0346 a0001c0002t0001g0355 a0001c0002t0001g0360 a0001c0002t0001g0374 a0001c0003t0001g0275 a0001c0003t0001g0276 a0001c0003t0001g0301 a0001c0003t0002g0038 a0001c0003t0002g0073 a0001c0004t0002g0030 a0001c0004t0002g0031 a0001c0004t0002g0084 a0001c0004t0002g0093 a0001c0004t0002g0115 a0001c0004t0002g0129 a0001c0004t0002g0147 a0001c0004t0002g0148 a0001c0004t0002g0156 a0001c0004t0002g0167 a0001c0004t0002g0178 a0001c0004t0002g0180 a0001c0004t0002g0189 a0001c0004t0002g0197 a0001c0004t0002g0201 a0001c0004t0002g0202 a0001c0004t0002g0203 a0001c0004t0002g0208 a0001c0004t0002g0224 a0001c0004t0002g0228 a0001c0004t0002g0232 a0001c0004t0002g0234 a0001c0004t0002g0235 a0001c0004t0002g0236 a0001c0004t0002g0243 a0001c0004t0002g0254 a0001c0004t0002g0256 a0001c0004t0002g0307 a0001c0004t0002g0318 a0001c0004t0002g0325 a0001c0004t0002g0335 a0001c0008t0001g0047 a0001c0008t0001g0048 a0001c0008t0001g0050 a0001c0008t0001g0053 a0001c0008t0001g0351 a0001c0008t0001g0352 a0001c0017t0001g0375 a0006c0022t0001g0025 a0007c0016t0002g0162 a0007c0016t0002g0163 a0009c0025t0002g0200	93	396	0.2349	-10	c.957 others(25): Show c.957-558_957-549delGTATATATAC	BFSP1	ENSG00000125864.14	transcript	ENST00000377873.8	protein_coding	6/7			chr20	TogoVar
BFSP1_chr20_17488905_17536379	17521054	TTTCCTCA others(3): Show TTTCCTCAAGA	T T	intron_variant intron_variant	MODIFIER	HG00408.hp1 HG00423.hp2 HG00438.hp2 others(137): Show HG00408.hp1 HG00423.hp2 HG00438.hp2 HG00544.hp1 HG00609.hp1 HG00621.hp1 HG00642.hp1 HG00673.hp1 HG00733.hp2 HG00735.hp2 HG00741.hp1 HG01069.hp1 HG01069.hp2 HG01071.hp1 HG01081.hp2 HG01106.hp2 HG01168.hp1 HG01175.hp2 HG01192.hp2 HG01243.hp1 HG01243.hp2 HG01257.hp2 HG01258.hp2 HG01346.hp1 HG01361.hp1 HG01433.hp1 HG01496.hp1 HG01496.hp2 HG01515.hp2 HG01891.hp2 HG01928.hp2 HG01934.hp1 HG01934.hp2 HG01943.hp2 HG01952.hp1 HG01975.hp2 HG01981.hp1 HG01993.hp2 HG02015.hp2 HG02027.hp1 HG02040.hp1 HG02056.hp2 HG02074.hp1 HG02074.hp2 HG02080.hp1 HG02083.hp1 HG02132.hp1 HG02148.hp2 HG02155.hp1 HG02257.hp1 HG02273.hp1 HG02273.hp2 HG02280.hp1 HG02293.hp1 HG02486.hp2 HG02523.hp1 HG02523.hp2 HG02559.hp1 HG02559.hp2 HG02630.hp2 HG02809.hp2 HG02818.hp1 HG02895.hp1 HG02965.hp1 HG02970.hp2 HG03017.hp1 HG03130.hp2 HG03453.hp1 HG03491.hp1 HG03492.hp1 HG03669.hp2 HG03704.hp2 HG03710.hp2 HG04115.hp2 HG04199.hp1 HG04199.hp2 HG04228.hp2 NA18612.hp1 NA18939.hp2 NA18941.hp2 NA18942.hp2 NA18943.hp1 NA18944.hp2 NA18945.hp1 NA18945.hp2 NA18950.hp2 NA18952.hp1 NA18953.hp1 NA18954.hp2 NA18955.hp1 NA18955.hp2 NA18960.hp2 NA18962.hp1 NA18963.hp2 NA18964.hp2 NA18965.hp1 NA18967.hp1 NA18968.hp1 NA18969.hp2 NA18970.hp2 NA18973.hp1 NA18973.hp2 NA18979.hp2 NA18980.hp1 NA18981.hp1 NA18983.hp1 NA18985.hp1 NA18986.hp2 NA18988.hp1 NA18990.hp2 NA18991.hp2 NA18994.hp2 NA18995.hp2 NA18998.hp2 NA18999.hp1 NA19001.hp2 NA19003.hp2 NA19006.hp2 NA19007.hp1 NA19012.hp1 NA19043.hp1 NA19057.hp1 NA19058.hp2 NA19062.hp2 NA19065.hp2 NA19066.hp1 NA19067.hp2 NA19068.hp2 NA19070.hp2 NA19074.hp2 NA19078.hp2 NA19079.hp1 NA19082.hp2 NA19084.hp2 NA19088.hp2 NA19091.hp2 NA19240.hp1 NA20129.hp2 NA20752.hp1 NA20752.hp2	a0001 a0002 a0003 others(2): Show a0001 a0002 a0003 a0004 a0007	a0001c0002 a0001c0003 a0001c0004 others(7): Show a0001c0002 a0001c0003 a0001c0004 a0001c0005 a0001c0006 a0001c0008 a0002c0001 a0003c0007 a0004c0010 a0007c0016	a0001c0002t0001 a0001c0003t0001 a0001c0003t0002 others(9): Show a0001c0002t0001 a0001c0003t0001 a0001c0003t0002 a0001c0003t0003 a0001c0004t0002 a0001c0005t0004 a0001c0006t0002 a0001c0008t0001 a0002c0001t0002 a0003c0007t0002 a0004c0010t0001 a0007c0016t0002	a0001c0002t0001g0077 a0001c0002t0001g0089 a0001c0002t0001g0107 others(128): Show a0001c0002t0001g0077 a0001c0002t0001g0089 a0001c0002t0001g0107 a0001c0002t0001g0110 a0001c0002t0001g0124 a0001c0002t0001g0138 a0001c0002t0001g0146 a0001c0002t0001g0153 a0001c0002t0001g0168 a0001c0002t0001g0174 a0001c0002t0001g0315 a0001c0002t0001g0320 a0001c0002t0001g0323 a0001c0002t0001g0330 a0001c0002t0001g0333 a0001c0002t0001g0334 a0001c0002t0001g0336 a0001c0002t0001g0339 a0001c0002t0001g0340 a0001c0002t0001g0343 a0001c0002t0001g0345 a0001c0002t0001g0346 a0001c0002t0001g0350 a0001c0002t0001g0353 a0001c0002t0001g0355 a0001c0002t0001g0360 a0001c0002t0001g0366 a0001c0002t0001g0374 a0001c0003t0001g0032 a0001c0003t0001g0044 a0001c0003t0001g0068 a0001c0003t0001g0091 a0001c0003t0001g0103 a0001c0003t0001g0141 a0001c0003t0001g0143 a0001c0003t0001g0144 a0001c0003t0001g0145 a0001c0003t0001g0149 a0001c0003t0001g0150 a0001c0003t0001g0152 a0001c0003t0001g0265 a0001c0003t0001g0268 a0001c0003t0001g0270 a0001c0003t0001g0289 a0001c0003t0001g0317 a0001c0003t0001g0348 a0001c0003t0001g0358 a0001c0003t0001g0367 a0001c0003t0002g0137 a0001c0003t0003g0015 a0001c0003t0003g0175 a0001c0003t0003g0198 a0001c0003t0003g0259 a0001c0003t0003g0324 a0001c0003t0003g0331 a0001c0003t0003g0332 a0001c0003t0003g0341 a0001c0004t0002g0093 a0001c0004t0002g0094 a0001c0004t0002g0131 a0001c0004t0002g0147 a0001c0004t0002g0148 a0001c0004t0002g0156 a0001c0004t0002g0307 a0001c0004t0002g0318 a0001c0004t0002g0335 a0001c0005t0004g0136 a0001c0005t0004g0142 a0001c0005t0004g0279 a0001c0006t0002g0009 a0001c0006t0002g0010 a0001c0006t0002g0135 a0001c0006t0002g0140 a0001c0008t0001g0351 a0001c0008t0001g0352 a0002c0001t0002g0001 a0002c0001t0002g0003 a0002c0001t0002g0014 a0002c0001t0002g0033 a0002c0001t0002g0043 a0002c0001t0002g0069 a0002c0001t0002g0078 a0002c0001t0002g0079 a0002c0001t0002g0090 a0002c0001t0002g0092 a0002c0001t0002g0108 a0002c0001t0002g0109 a0002c0001t0002g0122 a0002c0001t0002g0125 a0002c0001t0002g0133 a0002c0001t0002g0139 a0002c0001t0002g0151 a0002c0001t0002g0154 a0002c0001t0002g0155 a0002c0001t0002g0258 a0002c0001t0002g0266 a0002c0001t0002g0303 a0002c0001t0002g0304 a0002c0001t0002g0316 a0002c0001t0002g0319 a0002c0001t0002g0321 a0002c0001t0002g0322 a0002c0001t0002g0326 a0002c0001t0002g0327 a0002c0001t0002g0328 a0002c0001t0002g0329 a0002c0001t0002g0337 a0002c0001t0002g0338 a0002c0001t0002g0342 a0002c0001t0002g0344 a0002c0001t0002g0347 a0002c0001t0002g0349 a0002c0001t0002g0354 a0002c0001t0002g0356 a0002c0001t0002g0357 a0002c0001t0002g0359 a0002c0001t0002g0361 a0002c0001t0002g0362 a0002c0001t0002g0363 a0002c0001t0002g0364 a0002c0001t0002g0365 a0002c0001t0002g0368 a0002c0001t0002g0370 a0002c0001t0002g0371 a0002c0001t0002g0372 a0002c0001t0002g0373 a0003c0007t0002g0072 a0003c0007t0002g0308 a0004c0010t0001g0305 a0007c0016t0002g0162 a0007c0016t0002g0163	140	396	0.3535	-10	c.438 others(27): Show c.438+3784_438+3793delTCTTGAGGAA	BFSP1	ENSG00000125864.14	transcript	ENST00000377873.8	protein_coding	2/7			chr20	TogoVar
BFSP2_chr3_133395056_133480208	133437664	GAAAGAAA others(3): Show GAAAGAAAGAA	G G	intron_variant intron_variant	MODIFIER	HG02965.hp2 HG02965.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0130 a0001c0001t0001g0130	1	276	0.0036	-10	c.490 others(27): Show c.490-9638_490-9629delAAAGAAAAAG	BFSP2	ENSG00000170819.5	transcript	ENST00000302334.3	protein_coding	1/6		INFO_REALIGN_3_PRIME	chr3	TogoVar
BFSP2_chr3_133395056_133480208	133446570	TTATATAT others(3): Show TTATATATATA	T T	intron_variant intron_variant	MODIFIER	HG01106.hp2 HG01123.hp1 HG01175.hp1 others(12): Show HG01106.hp2 HG01123.hp1 HG01175.hp1 HG01928.hp1 HG01993.hp1 HG02273.hp2 HG02717.hp1 HG02738.hp2 HG02818.hp2 HG02965.hp1 HG03704.hp1 HG04199.hp1 NA18952.hp1 NA19000.hp1 NA19088.hp2	a0001 a0004 a0001 a0004	a0001c0001 a0001c0002 a0004c0005 a0001c0001 a0001c0002 a0004c0005	a0001c0001t0001 a0001c0002t0001 a0004c0005t0001 a0001c0001t0001 a0001c0002t0001 a0004c0005t0001	a0001c0001t0001g0013 a0001c0001t0001g0050 a0001c0001t0001g0071 others(12): Show a0001c0001t0001g0013 a0001c0001t0001g0050 a0001c0001t0001g0071 a0001c0001t0001g0104 a0001c0001t0001g0112 a0001c0001t0001g0113 a0001c0001t0001g0152 a0001c0001t0001g0162 a0001c0001t0001g0238 a0001c0001t0001g0250 a0001c0001t0001g0251 a0001c0002t0001g0056 a0001c0002t0001g0057 a0001c0002t0001g0226 a0004c0005t0001g0092	15	276	0.0544	-10	c.490 others(25): Show c.490-686_490-677delTATATATATA	BFSP2	ENSG00000170819.5	transcript	ENST00000302334.3	protein_coding	1/6		INFO_REALIGN_3_PRIME	chr3	TogoVar
BGN_chrX_153489980_153514546	153500771	GTGTGTGT others(3): Show GTGTGTGTGCA	G G	intron_variant intron_variant	MODIFIER	HG02886.hp2 NA19083.hp1 HG02886.hp2 NA19083.hp1	a0001 a0001	a0001c0002 a0001c0003 a0001c0002 a0001c0003	a0001c0002t0066 a0001c0003t0001 a0001c0002t0066 a0001c0003t0001	a0001c0002t0066g0202 a0001c0003t0001g0112 a0001c0002t0066g0202 a0001c0003t0001g0112	2	321	0.0062	-10	c.-11 others(27): Show c.-11-3832_-11-3823delGCATGTGTGT	BGN	ENSG00000182492.16	transcript	ENST00000331595.9	protein_coding	1/7		INFO_REALIGN_3_PRIME	chrX	TogoVar
BGN_chrX_153489980_153514546	153509028	CCTCTCTC others(3): Show CCTCTCTCTCT	C C	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG00280.hp1 HG00408.hp1 HG00642.hp1 others(53): Show HG00280.hp1 HG00408.hp1 HG00642.hp1 HG00733.hp2 HG00735.hp1 HG01081.hp2 HG01109.hp1 HG01175.hp2 HG01255.hp1 HG01261.hp1 HG01361.hp1 HG01516.hp1 HG01517.hp2 HG01884.hp1 HG01928.hp1 HG01943.hp1 HG01952.hp1 HG01975.hp1 HG02071.hp1 HG02074.hp1 HG02080.hp1 HG02148.hp2 HG02615.hp1 HG02622.hp2 HG02683.hp2 HG02723.hp2 HG02818.hp1 HG02886.hp1 HG02886.hp2 HG02896.hp2 HG02897.hp1 HG02970.hp2 HG03195.hp1 HG03195.hp2 HG03209.hp1 HG03490.hp1 HG03491.hp2 HG03540.hp1 HG03654.hp1 HG03688.hp1 HG03942.hp1 HG04199.hp1 HG04228.hp1 HG06807.hp2 NA18940.hp1 NA18944.hp1 NA18977.hp1 NA18979.hp2 NA18980.hp1 NA18998.hp1 NA19001.hp2 NA19030.hp1 NA19070.hp1 NA19080.hp1 NA19085.hp1 NA20752.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0003 others(2): Show a0001c0001 a0001c0002 a0001c0003 a0001c0004 a0001c0014	a0001c0001t0003 a0001c0001t0005 a0001c0001t0013 others(16): Show a0001c0001t0003 a0001c0001t0005 a0001c0001t0013 a0001c0001t0062 a0001c0002t0002 a0001c0002t0003 a0001c0002t0005 a0001c0002t0013 a0001c0002t0019 a0001c0002t0030 a0001c0002t0032 a0001c0002t0066 a0001c0002t0067 a0001c0002t0086 a0001c0003t0005 a0001c0003t0020 a0001c0003t0033 a0001c0004t0002 a0001c0014t0069	a0001c0001t0003g0007 a0001c0001t0005g0057 a0001c0001t0013g0104 others(30): Show a0001c0001t0003g0007 a0001c0001t0005g0057 a0001c0001t0013g0104 a0001c0001t0062g0200 a0001c0002t0002g0003 a0001c0002t0002g0004 a0001c0002t0002g0016 a0001c0002t0002g0018 a0001c0002t0002g0034 a0001c0002t0002g0106 a0001c0002t0002g0114 a0001c0002t0002g0116 a0001c0002t0002g0131 a0001c0002t0002g0160 a0001c0002t0002g0168 a0001c0002t0002g0171 a0001c0002t0002g0177 a0001c0002t0003g0008 a0001c0002t0005g0088 a0001c0002t0013g0070 a0001c0002t0019g0043 a0001c0002t0019g0134 a0001c0002t0030g0039 a0001c0002t0032g0130 a0001c0002t0066g0202 a0001c0002t0067g0003 a0001c0002t0086g0028 a0001c0003t0005g0001 a0001c0003t0020g0060 a0001c0003t0020g0107 a0001c0003t0033g0021 a0001c0004t0002g0153 a0001c0014t0069g0004	56	321	0.1745	-10	c.60 others(19): Show c.604_*613delCTCTCTCTCT	BGN	ENSG00000182492.16	transcript	ENST00000331595.9	protein_coding	8/8	604	INFO_REALIGN_3_PRIME	chrX	TogoVar
BGN_chrX_153489980_153514546	153509061	CTGTGTGT others(3): Show CTGTGTGTGTG	C C	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG00639.hp1 HG01516.hp2 HG02109.hp1 others(3): Show HG00639.hp1 HG01516.hp2 HG02109.hp1 HG02257.hp1 HG02809.hp2 NA20805.hp1	a0001 a0001	a0001c0002 a0001c0003 a0001c0002 a0001c0003	a0001c0002t0024 a0001c0002t0077 a0001c0003t0023 others(1): Show a0001c0002t0024 a0001c0002t0077 a0001c0003t0023 a0001c0003t0050	a0001c0002t0024g0110 a0001c0002t0024g0111 a0001c0002t0077g0058 others(3): Show a0001c0002t0024g0110 a0001c0002t0024g0111 a0001c0002t0077g0058 a0001c0003t0023g0050 a0001c0003t0023g0195 a0001c0003t0050g0190	6	321	0.0187	-10	c.65 others(19): Show c.652_*661delGTGTGTGTGT	BGN	ENSG00000182492.16	transcript	ENST00000331595.9	protein_coding	8/8	652	INFO_REALIGN_3_PRIME	chrX	TogoVar
BHLHA9_chr17_1265444_1276815	1274633	CTTTTTTT others(3): Show CTTTTTTTTTT	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01071.hp1 HG02602.hp1 HG01071.hp1 HG02602.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0000 a0001c0001t0001g0000	2	442	0.0045	-10	c.33 others(21): Show c.3363_*3372delTTTTTTTTTT	BHLHA9	ENSG00000205899.4	transcript	ENST00000391429.2	protein_coding		2819		chr17	TogoVar
BHLHA9_chr17_1265444_1276815	1275594	TGAGTGTG others(3): Show TGAGTGTGTGG	T T	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02602.hp2 NA18950.hp1 NA18951.hp2 HG02602.hp2 NA18950.hp1 NA18951.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0002t0002 a0001c0001t0001 a0001c0002t0002	a0001c0001t0001g0000 a0001c0002t0002g0000 a0001c0001t0001g0000 a0001c0002t0002g0000	3	442	0.0068	-10	c.43 others(21): Show c.4324_*4333delGAGTGTGTGG	BHLHA9	ENSG00000205899.4	transcript	ENST00000391429.2	protein_coding		3780		chr17	TogoVar
BHLHA9_chr17_1265444_1276815	1275784	TGTGGGGG others(3): Show TGTGGGGGTGA	T T	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02970.hp1 HG02970.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0008 a0001c0002t0008	a0001c0002t0008g0000 a0001c0002t0008g0000	1	442	0.0023	-10	c.45 others(21): Show c.4514_*4523delGTGGGGGTGA	BHLHA9	ENSG00000205899.4	transcript	ENST00000391429.2	protein_coding		3970		chr17	TogoVar
BHLHA9_chr17_1265444_1276815	1275794	AGTGTGTG others(3): Show AGTGTGTGAGT	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02055.hp1 HG02615.hp2 HG02717.hp1 others(9): Show HG02055.hp1 HG02615.hp2 HG02717.hp1 HG02723.hp1 HG02723.hp2 HG02976.hp1 HG03098.hp1 HG03540.hp2 HG03710.hp1 NA19030.hp1 NA20805.hp1 NA21309.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0002 a0001c0002t0001 a0001c0002t0002	a0001c0002t0001g0000 a0001c0002t0002g0000 a0001c0002t0001g0000 a0001c0002t0002g0000	12	442	0.0272	-10	c.45 others(21): Show c.4524_*4533delGTGTGTGAGT	BHLHA9	ENSG00000205899.4	transcript	ENST00000391429.2	protein_coding		3980		chr17	TogoVar
BHLHA9_chr17_1265444_1276815	1275808	TGAGTGTG others(3): Show TGAGTGTGTGA	T T	downstream_gene_variant downstream_gene_variant	MODIFIER	NA19077.hp2 NA19077.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0000 a0001c0001t0001g0000	1	442	0.0023	-10	c.45 others(21): Show c.4538_*4547delGAGTGTGTGA	BHLHA9	ENSG00000205899.4	transcript	ENST00000391429.2	protein_coding		3994		chr17	TogoVar
BHLHA9_chr17_1265444_1276815	1275865	AGAGAGTG others(3): Show AGAGAGTGTGT	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	HG03688.hp2 NA20905.hp2 HG03688.hp2 NA20905.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0002 a0001c0002t0002	a0001c0002t0002g0000 a0001c0002t0002g0000	2	442	0.0045	-10	c.45 others(21): Show c.4595_*4604delGAGAGTGTGT	BHLHA9	ENSG00000205899.4	transcript	ENST00000391429.2	protein_coding		4051		chr17	TogoVar
BHLHE22_chr8_64575365_64588627	64586015	TGTGTGTG others(3): Show TGTGTGTGTGC	T T	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00639.hp1 HG00639.hp2 HG01069.hp1 others(23): Show HG00639.hp1 HG00639.hp2 HG01069.hp1 HG01106.hp1 HG01346.hp2 HG02055.hp1 HG02615.hp2 HG02622.hp2 HG02630.hp2 HG02647.hp1 HG02723.hp1 HG02895.hp2 HG02897.hp2 HG02976.hp2 HG03041.hp1 HG03453.hp2 HG03491.hp1 HG03492.hp1 HG03579.hp2 HG03669.hp2 HG03688.hp2 HG04184.hp1 HG04228.hp1 NA19002.hp2 NA20300.hp2 NA21309.hp1	a0001 a0002 a0003 others(1): Show a0001 a0002 a0003 a0008	a0001c0001 a0002c0002 a0003c0003 others(2): Show a0001c0001 a0002c0002 a0003c0003 a0003c0008 a0008c0009	a0001c0001t0001 a0001c0001t0002 a0002c0002t0001 others(5): Show a0001c0001t0001 a0001c0001t0002 a0002c0002t0001 a0003c0003t0002 a0003c0003t0006 a0003c0008t0002 a0003c0008t0010 a0008c0009t0002	a0001c0001t0001g0000 a0001c0001t0002g0000 a0002c0002t0001g0000 others(5): Show a0001c0001t0001g0000 a0001c0001t0002g0000 a0002c0002t0001g0000 a0003c0003t0002g0000 a0003c0003t0006g0000 a0003c0008t0002g0000 a0003c0008t0010g0000 a0008c0009t0002g0000	26	432	0.0602	-10	c.40 others(21): Show c.4080_*4089delGTGTGTGTGC	BHLHE22	ENSG00000180828.3	transcript	ENST00000321870.3	protein_coding		2389		chr8	TogoVar
BHLHE22_chr8_64575365_64588627	64586043	TGCGCGCG others(3): Show TGCGCGCGCGC	T T	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00323.hp2 HG00323.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0000 a0001c0001t0001g0000	1	432	0.0023	-10	c.41 others(21): Show c.4108_*4117delGCGCGCGCGC	BHLHE22	ENSG00000180828.3	transcript	ENST00000321870.3	protein_coding		2417		chr8	TogoVar
BHLHE23_chr20_63000927_63011964	63007121	AGGGGCGG others(3): Show AGGGGCGGCGC	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00099.hp1 HG00280.hp1 HG00280.hp2 others(49): Show HG00099.hp1 HG00280.hp1 HG00280.hp2 HG00741.hp1 HG01070.hp1 HG01071.hp2 HG01099.hp2 HG01123.hp2 HG01175.hp1 HG01175.hp2 HG01192.hp2 HG01243.hp1 HG01255.hp1 HG01257.hp1 HG01258.hp2 HG01358.hp2 HG01891.hp2 HG01928.hp2 HG01952.hp2 HG02004.hp1 HG02004.hp2 HG02055.hp2 HG02056.hp2 HG02132.hp1 HG02132.hp2 HG02451.hp2 HG02622.hp1 HG02622.hp2 HG02630.hp1 HG02818.hp2 HG02895.hp1 HG02897.hp2 HG03041.hp1 HG03098.hp1 HG03130.hp2 HG03139.hp1 HG03209.hp1 HG03453.hp2 HG03516.hp1 HG03579.hp2 NA18940.hp1 NA18944.hp2 NA18966.hp2 NA18969.hp2 NA18975.hp1 NA18984.hp2 NA19043.hp2 NA19054.hp1 NA19055.hp1 NA19068.hp1 NA19085.hp2 NA20300.hp1	a0001 a0002 a0005 a0001 a0002 a0005	a0001c0001 a0001c0008 a0002c0003 others(1): Show a0001c0001 a0001c0008 a0002c0003 a0005c0007	a0001c0001t0001 a0001c0008t0001 a0002c0003t0001 others(1): Show a0001c0001t0001 a0001c0008t0001 a0002c0003t0001 a0005c0007t0001	a0001c0001t0001g0000 a0001c0008t0001g0000 a0002c0003t0001g0000 others(1): Show a0001c0001t0001g0000 a0001c0008t0001g0000 a0002c0003t0001g0000 a0005c0007t0001g0000	52	446	0.1166	-10	c.-35 others(19): Show c.-357_-348delGCGCCGCCCC	BHLHE23	ENSG00000125533.6	transcript	ENST00000612929.2	protein_coding		158		chr20	TogoVar
BHLHE40_chr3_4974437_4990323	4981185	TACACACA others(3): Show TACACACACAC	T T	intron_variant intron_variant	MODIFIER	HG00280.hp1 HG00280.hp2 HG00408.hp2 others(114): Show HG00280.hp1 HG00280.hp2 HG00408.hp2 HG00423.hp2 HG00544.hp1 HG00597.hp2 HG00609.hp1 HG00621.hp1 HG00621.hp2 HG00639.hp2 HG00642.hp1 HG00642.hp2 HG00673.hp2 HG00738.hp2 HG01074.hp1 HG01106.hp1 HG01123.hp2 HG01167.hp1 HG01168.hp1 HG01168.hp2 HG01169.hp1 HG01192.hp1 HG01243.hp1 HG01243.hp2 HG01256.hp2 HG01346.hp1 HG01346.hp2 HG01516.hp1 HG01516.hp2 HG01517.hp1 HG01884.hp2 HG01891.hp2 HG01928.hp1 HG01928.hp2 HG01934.hp2 HG01978.hp1 HG01993.hp1 HG02004.hp1 HG02015.hp1 HG02027.hp1 HG02027.hp2 HG02040.hp1 HG02071.hp1 HG02071.hp2 HG02074.hp1 HG02257.hp2 HG02273.hp1 HG02559.hp1 HG02602.hp2 HG02615.hp1 HG02615.hp2 HG02622.hp1 HG02698.hp2 HG02717.hp2 HG02886.hp1 HG03195.hp1 HG03209.hp1 HG03225.hp1 HG03239.hp1 HG03453.hp2 HG03490.hp1 HG03579.hp1 HG03579.hp2 HG03704.hp2 HG03927.hp2 HG04115.hp2 HG04184.hp1 HG04204.hp1 NA18939.hp2 NA18942.hp1 NA18943.hp2 NA18944.hp1 NA18944.hp2 NA18945.hp2 NA18946.hp1 NA18948.hp2 NA18950.hp1 NA18953.hp2 NA18956.hp2 NA18963.hp1 NA18966.hp1 NA18966.hp2 NA18968.hp1 NA18971.hp2 NA18973.hp1 NA18973.hp2 NA18975.hp1 NA18977.hp1 NA18979.hp2 NA18985.hp2 NA18986.hp1 NA18986.hp2 NA18987.hp2 NA18992.hp1 NA18997.hp1 NA19000.hp1 NA19000.hp2 NA19004.hp1 NA19005.hp2 NA19009.hp2 NA19010.hp2 NA19011.hp2 NA19012.hp1 NA19043.hp1 NA19057.hp2 NA19062.hp2 NA19068.hp2 NA19070.hp2 NA19079.hp1 NA19082.hp2 NA19083.hp1 NA19084.hp1 NA19085.hp2 NA19090.hp1 NA19091.hp2 NA20752.hp1 homoSapiens_chm13v2.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0001t0003 a0001c0001t0004 others(13): Show a0001c0001t0001 a0001c0001t0003 a0001c0001t0004 a0001c0001t0009 a0001c0001t0011 a0001c0001t0016 a0001c0001t0017 a0001c0001t0019 a0001c0001t0030 a0001c0001t0032 a0001c0001t0033 a0001c0001t0036 a0001c0001t0040 a0001c0001t0048 a0001c0002t0002 a0001c0002t0025	a0001c0001t0001g0001 a0001c0001t0001g0008 a0001c0001t0001g0011 others(18): Show a0001c0001t0001g0001 a0001c0001t0001g0008 a0001c0001t0001g0011 a0001c0001t0001g0052 a0001c0001t0001g0054 a0001c0001t0003g0001 a0001c0001t0004g0001 a0001c0001t0004g0011 a0001c0001t0009g0001 a0001c0001t0011g0001 a0001c0001t0016g0001 a0001c0001t0017g0001 a0001c0001t0019g0001 a0001c0001t0030g0028 a0001c0001t0032g0001 a0001c0001t0033g0041 a0001c0001t0036g0001 a0001c0001t0040g0008 a0001c0001t0048g0001 a0001c0002t0002g0040 a0001c0002t0025g0039	117	436	0.2684	-10	c.259 others(25): Show c.259-183_259-174delCACACACACA	BHLHE40	ENSG00000134107.5	transcript	ENST00000256495.4	protein_coding	3/4		INFO_REALIGN_3_PRIME	chr3	TogoVar
BHLHE41_chr12_26115030_26130037	26124960	ACACACAC others(3): Show ACACACACACG	A A	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG01109.hp2 HG01192.hp2 HG03927.hp1 HG01109.hp2 HG01192.hp2 HG03927.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0013 a0001c0001t0027 a0001c0001t0013 a0001c0001t0027	a0001c0001t0013g0021 a0001c0001t0027g0048 a0001c0001t0013g0021 a0001c0001t0027g0048	3	422	0.0071	-10	c.-19 others(19): Show c.-191_-182delCGTGTGTGTG	BHLHE41	ENSG00000123095.6	transcript	ENST00000242728.5	protein_coding	1/5	182		chr12	TogoVar
BHMT2_chr5_79064767_79095069	79088358	CTGTGTGT others(3): Show CTGTGTGTGTG	C C	intron_variant intron_variant	MODIFIER	HG01167.hp1 HG02717.hp1 HG03139.hp1 HG01167.hp1 HG02717.hp1 HG03139.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0030 a0001c0001t0001g0074 a0001c0001t0001g0030 a0001c0001t0001g0074	3	390	0.0077	-10	c.101 others(26): Show c.1011-104_1011-95delTGTGTGTGTG	BHMT2	ENSG00000132840.10	transcript	ENST00000255192.8	protein_coding	7/7		INFO_REALIGN_3_PRIME	chr5	TogoVar
BHMT_chr5_79106809_79137288	79137009	CATATATA others(3): Show CATATATATGA	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	HG03098.hp2 HG03098.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0001	a0002c0002t0001g0129 a0002c0002t0001g0129	1	432	0.0023	-10	c.58 others(21): Show c.5894_*5903delATATATATGA	BHMT	ENSG00000145692.15	transcript	ENST00000274353.10	protein_coding		4722		chr5	TogoVar
BHMT_chr5_79106809_79137288	79137260	TATATATA others(3): Show TATATATATGA	T T	downstream_gene_variant downstream_gene_variant	MODIFIER	NA19070.hp2 NA19070.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0239 a0001c0001t0001g0239	1	432	0.0023	-10	c.61 others(21): Show c.6145_*6154delATATATATGA	BHMT	ENSG00000145692.15	transcript	ENST00000274353.10	protein_coding		4973		chr5	TogoVar
BICC1_chr10_58507872_58836435	58583582	CTCTGTGT others(3): Show CTCTGTGTGTG	C C	intron_variant intron_variant	MODIFIER	NA19240.hp2 NA19240.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0011 a0001c0001t0002g0011	1	132	0.0076	-10	c.191 others(29): Show c.191-37271_191-37262delCTGTGTGTGT	BICC1	ENSG00000122870.12	transcript	ENST00000373886.8	protein_coding	1/20		INFO_REALIGN_3_PRIME	chr10	TogoVar
BICC1_chr10_58507872_58836435	58583584	CTGTGTGT others(3): Show CTGTGTGTGTG	C C	intron_variant intron_variant	MODIFIER	HG02717.hp2 HG02895.hp2 HG02717.hp2 HG02895.hp2	a0001 a0005 a0001 a0005	a0001c0001 a0005c0009 a0001c0001 a0005c0009	a0001c0001t0002 a0005c0009t0031 a0001c0001t0002 a0005c0009t0031	a0001c0001t0002g0013 a0005c0009t0031g0012 a0001c0001t0002g0013 a0005c0009t0031g0012	2	132	0.0152	-10	c.191 others(29): Show c.191-37237_191-37228delGTGTGTGTGT	BICC1	ENSG00000122870.12	transcript	ENST00000373886.8	protein_coding	1/20		INFO_REALIGN_3_PRIME	chr10	TogoVar
BICC1_chr10_58507872_58836435	58584055	AACACACA others(3): Show AACACACACAC	A A	intron_variant intron_variant	MODIFIER	HG01358.hp1 HG01515.hp2 HG01517.hp1 others(4): Show HG01358.hp1 HG01515.hp2 HG01517.hp1 HG01884.hp1 HG02258.hp2 NA18961.hp2 NA18983.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0002 a0001c0001t0003 a0001c0001t0005 others(3): Show a0001c0001t0002 a0001c0001t0003 a0001c0001t0005 a0001c0001t0012 a0002c0002t0004 a0002c0002t0006	a0001c0001t0002g0003 a0001c0001t0003g0005 a0001c0001t0003g0006 others(4): Show a0001c0001t0002g0003 a0001c0001t0003g0005 a0001c0001t0003g0006 a0001c0001t0005g0007 a0001c0001t0012g0004 a0002c0002t0004g0038 a0002c0002t0006g0078	7	132	0.0530	-10	c.191 others(29): Show c.191-36764_191-36755delCACACACACA	BICC1	ENSG00000122870.12	transcript	ENST00000373886.8	protein_coding	1/20		INFO_REALIGN_3_PRIME	chr10	TogoVar
BICC1_chr10_58507872_58836435	58621903	TTAGAATA others(3): Show TTAGAATAGAA	T T	intron_variant intron_variant	MODIFIER	HG02895.hp2 NA18906.hp2 HG02895.hp2 NA18906.hp2	a0002 a0005 a0002 a0005	a0002c0008 a0005c0009 a0002c0008 a0005c0009	a0002c0008t0045 a0005c0009t0031 a0002c0008t0045 a0005c0009t0031	a0002c0008t0045g0118 a0005c0009t0031g0012 a0002c0008t0045g0118 a0005c0009t0031g0012	2	132	0.0152	-10	c.237 others(27): Show c.237+1060_237+1069delGAATAGAATA	BICC1	ENSG00000122870.12	transcript	ENST00000373886.8	protein_coding	2/20		INFO_REALIGN_3_PRIME	chr10	TogoVar
BICC1_chr10_58507872_58836435	58718784	GTGCGCAC others(3): Show GTGCGCACGCC	G G	intron_variant intron_variant	MODIFIER	HG02486.hp2 HG02486.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0018 a0002c0002t0018	a0002c0002t0018g0131 a0002c0002t0018g0131	1	132	0.0076	-10	c.307 others(29): Show c.307+16642_307+16651delTGCGCACGCC	BICC1	ENSG00000122870.12	transcript	ENST00000373886.8	protein_coding	3/20			chr10	TogoVar
BICC1_chr10_58507872_58836435	58732371	GTGTGTAT others(3): Show GTGTGTATGTA	G G	intron_variant intron_variant	MODIFIER	HG03471.hp1 HG03471.hp1	a0003 a0003	a0003c0004 a0003c0004	a0003c0004t0035 a0003c0004t0035	a0003c0004t0035g0044 a0003c0004t0035g0044	1	132	0.0076	-10	c.307 others(29): Show c.307+30230_307+30239delGTGTATGTAT	BICC1	ENSG00000122870.12	transcript	ENST00000373886.8	protein_coding	3/20		INFO_REALIGN_3_PRIME	chr10	TogoVar
BICC1_chr10_58507872_58836435	58732379	GTATATAT others(3): Show GTATATATATA	G G	intron_variant intron_variant	MODIFIER	HG00639.hp1 HG02965.hp1 HG00639.hp1 HG02965.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0002c0003 a0001c0001 a0002c0003	a0001c0001t0046 a0002c0003t0023 a0001c0001t0046 a0002c0003t0023	a0001c0001t0046g0090 a0002c0003t0023g0023 a0001c0001t0046g0090 a0002c0003t0023g0023	2	132	0.0152	-10	c.307 others(29): Show c.307+30289_307+30298delTATATATATA	BICC1	ENSG00000122870.12	transcript	ENST00000373886.8	protein_coding	3/20		INFO_REALIGN_3_PRIME	chr10	TogoVar
BICC1_chr10_58507872_58836435	58794165	TTGTGTGT others(3): Show TTGTGTGTGTG	T T	intron_variant intron_variant	MODIFIER	HG02895.hp2 HG02895.hp2	a0005 a0005	a0005c0009 a0005c0009	a0005c0009t0031 a0005c0009t0031	a0005c0009t0031g0012 a0005c0009t0031g0012	1	132	0.0076	-10	c.117 others(27): Show c.1179+586_1179+595delGTGTGTGTGT	BICC1	ENSG00000122870.12	transcript	ENST00000373886.8	protein_coding	9/20		INFO_REALIGN_3_PRIME	chr10	TogoVar
BICC1_chr10_58507872_58836435	58816745	CTGTGTGT others(3): Show CTGTGTGTGTG	C C	intron_variant intron_variant	MODIFIER	NA18747.hp1 NA18906.hp2 NA18747.hp1 NA18906.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0002c0008 a0001c0001 a0002c0008	a0001c0001t0001 a0002c0008t0045 a0001c0001t0001 a0002c0008t0045	a0001c0001t0001g0109 a0002c0008t0045g0118 a0001c0001t0001g0109 a0002c0008t0045g0118	2	132	0.0152	-10	c.253 others(27): Show c.2534-776_2534-767delTGTGTGTGTG	BICC1	ENSG00000122870.12	transcript	ENST00000373886.8	protein_coding	18/20		INFO_REALIGN_3_PRIME	chr10	TogoVar
BICD1_chr12_32101847_32388633	32118060	ATATTTTA others(3): Show ATATTTTATTT	A A	intron_variant intron_variant	MODIFIER	NA19240.hp2 NA19240.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0255 a0001c0001t0001g0255	1	290	0.0035	-10	c.213 others(29): Show c.213+10537_213+10546delTATTTTATTT	BICD1	ENSG00000151746.15	transcript	ENST00000652176.1	protein_coding	1/9		INFO_REALIGN_3_PRIME	chr12	TogoVar
BICD1_chr12_32101847_32388633	32120867	TAGAGAGA others(3): Show TAGAGAGAGAG	T T	intron_variant intron_variant	MODIFIER	HG02257.hp1 HG02622.hp2 HG02922.hp1 others(3): Show HG02257.hp1 HG02622.hp2 HG02922.hp1 HG03130.hp1 HG06807.hp1 NA18906.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0022 a0001c0001t0023 a0001c0001t0035 others(1): Show a0001c0001t0022 a0001c0001t0023 a0001c0001t0035 a0001c0001t0039	a0001c0001t0022g0101 a0001c0001t0022g0102 a0001c0001t0023g0096 others(3): Show a0001c0001t0022g0101 a0001c0001t0022g0102 a0001c0001t0023g0096 a0001c0001t0023g0099 a0001c0001t0035g0097 a0001c0001t0039g0100	6	290	0.0207	-10	c.213 others(29): Show c.213+13343_213+13352delGAGAGAGAGA	BICD1	ENSG00000151746.15	transcript	ENST00000652176.1	protein_coding	1/9		INFO_REALIGN_3_PRIME	chr12	TogoVar
BICD1_chr12_32101847_32388633	32142422	AAAAAAAA others(3): Show AAAAAAAAAAC	A A	intron_variant intron_variant	MODIFIER	NA19240.hp2 NA19240.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0255 a0001c0001t0001g0255	1	290	0.0035	-10	c.213 others(29): Show c.213+34885_213+34894delAAACAAAAAA	BICD1	ENSG00000151746.15	transcript	ENST00000652176.1	protein_coding	1/9		INFO_REALIGN_3_PRIME	chr12	TogoVar
BICD1_chr12_32101847_32388633	32159850	TGTAGTTT others(3): Show TGTAGTTTGGG	T T	intron_variant intron_variant	MODIFIER	NA18951.hp2 NA18951.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0005 a0001c0002t0005	a0001c0002t0005g0116 a0001c0002t0005g0116	1	290	0.0035	-10	c.213 others(29): Show c.213+52307_213+52316delGTAGTTTGGG	BICD1	ENSG00000151746.15	transcript	ENST00000652176.1	protein_coding	1/9			chr12	TogoVar
BICD1_chr12_32101847_32388633	32171940	TACACACA others(3): Show TACACACACAC	T T	intron_variant intron_variant	MODIFIER	HG00408.hp1 HG00609.hp2 HG01109.hp1 others(11): Show HG00408.hp1 HG00609.hp2 HG01109.hp1 HG01496.hp1 HG01952.hp2 HG02004.hp2 HG02257.hp2 HG02602.hp1 HG03927.hp2 NA18961.hp2 NA19010.hp2 NA19240.hp2 NA20300.hp1 NA21309.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0003 a0001c0001 a0001c0002 a0001c0003	a0001c0001t0001 a0001c0001t0003 a0001c0001t0009 others(5): Show a0001c0001t0001 a0001c0001t0003 a0001c0001t0009 a0001c0001t0010 a0001c0001t0058 a0001c0001t0060 a0001c0002t0002 a0001c0003t0002	a0001c0001t0001g0188 a0001c0001t0001g0255 a0001c0001t0003g0225 others(11): Show a0001c0001t0001g0188 a0001c0001t0001g0255 a0001c0001t0003g0225 a0001c0001t0003g0232 a0001c0001t0003g0246 a0001c0001t0009g0068 a0001c0001t0009g0288 a0001c0001t0010g0003 a0001c0001t0010g0014 a0001c0001t0058g0221 a0001c0001t0060g0244 a0001c0002t0002g0076 a0001c0002t0002g0228 a0001c0003t0002g0240	14	290	0.0483	-10	c.214 others(29): Show c.214-44266_214-44257delACACACACAC	BICD1	ENSG00000151746.15	transcript	ENST00000652176.1	protein_coding	1/9		INFO_REALIGN_3_PRIME	chr12	TogoVar
BICD1_chr12_32101847_32388633	32198322	GCATCTAT others(3): Show GCATCTATCTA	G G	intron_variant intron_variant	MODIFIER	HG00438.hp2 HG01943.hp1 HG01978.hp2 others(30): Show HG00438.hp2 HG01943.hp1 HG01978.hp2 HG02004.hp1 HG02055.hp2 HG02071.hp1 HG02132.hp1 HG02148.hp2 HG02280.hp2 HG02300.hp1 HG02451.hp1 HG02486.hp1 HG02615.hp1 HG02615.hp2 HG02735.hp1 HG02818.hp2 HG02895.hp2 HG03139.hp1 HG03471.hp1 HG03688.hp2 HG03710.hp2 NA18944.hp1 NA18946.hp1 NA18966.hp1 NA18969.hp1 NA18975.hp1 NA18977.hp2 NA18981.hp2 NA18986.hp1 NA19063.hp2 NA19080.hp2 NA19240.hp1 NA20300.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0001t0003 a0001c0001t0009 others(15): Show a0001c0001t0001 a0001c0001t0003 a0001c0001t0009 a0001c0001t0010 a0001c0001t0011 a0001c0001t0012 a0001c0001t0017 a0001c0001t0019 a0001c0001t0020 a0001c0001t0043 a0001c0001t0047 a0001c0001t0048 a0001c0002t0001 a0001c0002t0002 a0001c0002t0005 a0001c0002t0007 a0001c0002t0020 a0001c0002t0040	a0001c0001t0001g0038 a0001c0001t0001g0049 a0001c0001t0001g0184 others(30): Show a0001c0001t0001g0038 a0001c0001t0001g0049 a0001c0001t0001g0184 a0001c0001t0001g0188 a0001c0001t0003g0177 a0001c0001t0003g0213 a0001c0001t0003g0216 a0001c0001t0003g0234 a0001c0001t0003g0239 a0001c0001t0009g0081 a0001c0001t0009g0084 a0001c0001t0009g0183 a0001c0001t0010g0161 a0001c0001t0011g0235 a0001c0001t0011g0269 a0001c0001t0012g0211 a0001c0001t0017g0092 a0001c0001t0019g0185 a0001c0001t0019g0191 a0001c0001t0020g0217 a0001c0001t0043g0236 a0001c0001t0047g0247 a0001c0001t0048g0218 a0001c0002t0001g0082 a0001c0002t0001g0210 a0001c0002t0001g0233 a0001c0002t0002g0064 a0001c0002t0002g0083 a0001c0002t0002g0215 a0001c0002t0005g0151 a0001c0002t0007g0150 a0001c0002t0020g0214 a0001c0002t0040g0091	33	290	0.1138	-10	c.214 others(29): Show c.214-17924_214-17915delCATCTATCTA	BICD1	ENSG00000151746.15	transcript	ENST00000652176.1	protein_coding	1/9			chr12	TogoVar
BICD1_chr12_32101847_32388633	32282199	CTTCTTTT others(3): Show CTTCTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG03710.hp1 HG03834.hp1 NA19083.hp2 others(1): Show HG03710.hp1 HG03834.hp1 NA19083.hp2 NA20129.hp1	a0001 a0001	a0001c0001 a0001c0003 a0001c0001 a0001c0003	a0001c0001t0017 a0001c0003t0013 a0001c0003t0033 others(1): Show a0001c0001t0017 a0001c0003t0013 a0001c0003t0033 a0001c0003t0052	a0001c0001t0017g0094 a0001c0003t0013g0051 a0001c0003t0033g0122 others(1): Show a0001c0001t0017g0094 a0001c0003t0013g0051 a0001c0003t0033g0122 a0001c0003t0052g0286	4	290	0.0138	-10	c.427 others(29): Show c.427-11792_427-11783delCTTTTTTTTT	BICD1	ENSG00000151746.15	transcript	ENST00000652176.1	protein_coding	2/9		INFO_REALIGN_3_PRIME	chr12	TogoVar
BICD1_chr12_32101847_32388633	32300631	ATTTTTTT others(3): Show ATTTTTTTTTT	A A	intron_variant intron_variant	MODIFIER	HG00558.hp1 HG00741.hp2 HG01167.hp2 others(39): Show HG00558.hp1 HG00741.hp2 HG01167.hp2 HG01169.hp2 HG01175.hp2 HG01192.hp2 HG01261.hp2 HG01346.hp1 HG02071.hp1 HG02109.hp2 HG02145.hp2 HG02257.hp2 HG02280.hp2 HG02451.hp1 HG02451.hp2 HG02559.hp2 HG02602.hp1 HG02615.hp1 HG02630.hp2 HG02717.hp2 HG02818.hp2 HG02895.hp1 HG02897.hp2 HG03139.hp2 HG03195.hp1 HG03209.hp2 HG03225.hp2 HG03471.hp2 HG03492.hp2 HG03516.hp2 HG03710.hp1 HG03831.hp2 HG03834.hp1 HG03834.hp2 HG03927.hp2 HG04184.hp1 NA18522.hp1 NA18906.hp1 NA18966.hp1 NA19030.hp2 NA19057.hp1 NA19083.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0003 others(1): Show a0001c0001 a0001c0002 a0001c0003 a0001c0005	a0001c0001t0001 a0001c0001t0006 a0001c0001t0008 others(17): Show a0001c0001t0001 a0001c0001t0006 a0001c0001t0008 a0001c0001t0009 a0001c0001t0010 a0001c0001t0015 a0001c0001t0017 a0001c0001t0018 a0001c0001t0024 a0001c0001t0061 a0001c0002t0002 a0001c0003t0002 a0001c0003t0013 a0001c0003t0033 a0001c0003t0042 a0001c0003t0052 a0001c0003t0053 a0001c0003t0054 a0001c0005t0009 a0001c0005t0012	a0001c0001t0001g0049 a0001c0001t0006g0021 a0001c0001t0006g0023 others(39): Show a0001c0001t0001g0049 a0001c0001t0006g0021 a0001c0001t0006g0023 a0001c0001t0006g0034 a0001c0001t0006g0035 a0001c0001t0006g0036 a0001c0001t0006g0105 a0001c0001t0006g0152 a0001c0001t0006g0153 a0001c0001t0006g0155 a0001c0001t0006g0156 a0001c0001t0006g0157 a0001c0001t0006g0162 a0001c0001t0006g0163 a0001c0001t0006g0164 a0001c0001t0006g0165 a0001c0001t0008g0123 a0001c0001t0009g0081 a0001c0001t0009g0084 a0001c0001t0009g0086 a0001c0001t0009g0159 a0001c0001t0009g0183 a0001c0001t0009g0288 a0001c0001t0010g0018 a0001c0001t0010g0161 a0001c0001t0015g0020 a0001c0001t0017g0092 a0001c0001t0018g0268 a0001c0001t0024g0209 a0001c0001t0061g0226 a0001c0002t0002g0076 a0001c0003t0002g0240 a0001c0003t0013g0051 a0001c0003t0013g0189 a0001c0003t0013g0277 a0001c0003t0033g0122 a0001c0003t0042g0274 a0001c0003t0052g0286 a0001c0003t0053g0285 a0001c0003t0054g0079 a0001c0005t0009g0270 a0001c0005t0012g0271	42	290	0.1448	-10	c.580 others(27): Show c.580-5046_580-5037delTTTTTTTTTT	BICD1	ENSG00000151746.15	transcript	ENST00000652176.1	protein_coding	3/9		INFO_REALIGN_3_PRIME	chr12	TogoVar
BICD1_chr12_32101847_32388633	32346576	ATATATAC others(3): Show ATATATACGTG	A A	intron_variant intron_variant	MODIFIER	HG01167.hp1 HG02280.hp1 HG01167.hp1 HG02280.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0007 a0001c0001t0007	a0001c0001t0007g0026 a0001c0001t0007g0027 a0001c0001t0007g0026 a0001c0001t0007g0027	2	290	0.0069	-10	c.276 others(29): Show c.2764+7604_2764+7613delCGTGTATATA	BICD1	ENSG00000151746.15	transcript	ENST00000652176.1	protein_coding	8/9		INFO_REALIGN_3_PRIME	chr12	TogoVar
BICD1_chr12_32101847_32388633	32348723	AATATATA others(3): Show AATATATATAT	A A	intron_variant intron_variant	MODIFIER	HG01175.hp1 HG02155.hp1 HG02735.hp2 others(2): Show HG01175.hp1 HG02155.hp1 HG02735.hp2 NA20300.hp1 NA20905.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0003 a0001c0001t0004 a0001c0001t0001 a0001c0001t0003 a0001c0001t0004	a0001c0001t0001g0188 a0001c0001t0001g0193 a0001c0001t0001g0202 others(2): Show a0001c0001t0001g0188 a0001c0001t0001g0193 a0001c0001t0001g0202 a0001c0001t0003g0230 a0001c0001t0004g0136	5	290	0.0172	-10	c.276 others(29): Show c.2764+9791_2764+9800delATATATATAT	BICD1	ENSG00000151746.15	transcript	ENST00000652176.1	protein_coding	8/9		INFO_REALIGN_3_PRIME	chr12	TogoVar
BICDL1_chr12_119984236_120099494	120013439	AGTGTGTG others(3): Show AGTGTGTGTGT	A A	intron_variant intron_variant	MODIFIER	HG02257.hp1 HG03195.hp1 NA19030.hp2 HG02257.hp1 HG03195.hp1 NA19030.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0122 a0001c0001t0003g0123 a0001c0001t0003g0273 a0001c0001t0003g0122 a0001c0001t0003g0123 a0001c0001t0003g0273	3	296	0.0101	-10	c.645 others(29): Show c.645+14738_645+14747delGTGTGTGTGT	BICDL1	ENSG00000135127.12	transcript	ENST00000548673.6	protein_coding	2/9		INFO_REALIGN_3_PRIME	chr12	TogoVar
BICDL1_chr12_119984236_120099494	120057818	CTTTTTTT others(3): Show CTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG00597.hp1 HG00609.hp1 HG01891.hp2 others(10): Show HG00597.hp1 HG00609.hp1 HG01891.hp2 NA18612.hp1 NA18942.hp2 NA18947.hp1 NA18953.hp2 NA18975.hp1 NA18992.hp1 NA19002.hp2 NA19005.hp1 NA19063.hp2 NA20300.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0006 a0001c0001t0017 others(1): Show a0001c0001t0003 a0001c0001t0006 a0001c0001t0017 a0001c0001t0028	a0001c0001t0003g0260 a0001c0001t0006g0257 a0001c0001t0006g0261 others(10): Show a0001c0001t0003g0260 a0001c0001t0006g0257 a0001c0001t0006g0261 a0001c0001t0006g0262 a0001c0001t0006g0263 a0001c0001t0006g0264 a0001c0001t0006g0266 a0001c0001t0006g0267 a0001c0001t0006g0270 a0001c0001t0006g0271 a0001c0001t0017g0259 a0001c0001t0017g0269 a0001c0001t0028g0082	13	296	0.0439	-10	c.646 others(27): Show c.646-3871_646-3862delTTTTTTTTTT	BICDL1	ENSG00000135127.12	transcript	ENST00000548673.6	protein_coding	2/9		INFO_REALIGN_3_PRIME	chr12	TogoVar
BICDL2_chr16_3022682_3041944	3027709	CTTTTTTT others(3): Show CTTTTTTTTTT	C C	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG01496.hp2 HG01496.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0009 a0002c0002t0009	a0002c0002t0009g0071 a0002c0002t0009g0071	1	390	0.0026	-10	c.38 others(19): Show c.387_*396delAAAAAAAAAA	BICDL2	ENSG00000162069.16	transcript	ENST00000572449.6	protein_coding	10/10	387		chr16	TogoVar
BICRAL_chr6_42777052_42873556	42779223	AACACACA others(3): Show AACACACACAC	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01074.hp1 HG01168.hp1 HG01168.hp2 others(15): Show HG01074.hp1 HG01168.hp1 HG01168.hp2 HG01169.hp2 HG01496.hp2 HG01516.hp1 HG01517.hp1 HG02109.hp2 HG02165.hp1 HG02280.hp1 HG02293.hp2 HG02970.hp1 HG03041.hp1 HG03209.hp1 HG06807.hp1 NA18612.hp2 NA18945.hp2 NA18950.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(3): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0008 a0001c0001t0009 a0001c0001t0012	a0001c0001t0001g0085 a0001c0001t0001g0152 a0001c0001t0001g0154 others(15): Show a0001c0001t0001g0085 a0001c0001t0001g0152 a0001c0001t0001g0154 a0001c0001t0001g0168 a0001c0001t0001g0173 a0001c0001t0001g0182 a0001c0001t0002g0005 a0001c0001t0002g0126 a0001c0001t0002g0153 a0001c0001t0003g0121 a0001c0001t0003g0159 a0001c0001t0003g0204 a0001c0001t0008g0128 a0001c0001t0008g0129 a0001c0001t0009g0074 a0001c0001t0009g0107 a0001c0001t0012g0062 a0001c0001t0012g0063	18	270	0.0667	-10	c.-29 others(21): Show c.-2979_-2970delACACACACAC	BICRAL	ENSG00000112624.14	transcript	ENST00000314073.10	protein_coding		2828		chr6	TogoVar
BICRAL_chr6_42777052_42873556	42793122	ATTTTTTT others(3): Show ATTTTTTTTTT	A A	intron_variant intron_variant	MODIFIER	HG02647.hp2 HG03540.hp1 HG02647.hp2 HG03540.hp1	a0002 a0002	a0002c0003 a0002c0003	a0002c0003t0004 a0002c0003t0007 a0002c0003t0004 a0002c0003t0007	a0002c0003t0004g0040 a0002c0003t0007g0039 a0002c0003t0004g0040 a0002c0003t0007g0039	2	270	0.0074	-10	c.-10 others(31): Show c.-102+11051_-102+11060delTTTTTTTTTT	BICRAL	ENSG00000112624.14	transcript	ENST00000314073.10	protein_coding	1/12		INFO_REALIGN_3_PRIME	chr6	TogoVar
BICRAL_chr6_42777052_42873556	42793296	ATTTTTTT others(3): Show ATTTTTTTTTT	A A	intron_variant intron_variant	MODIFIER	HG02258.hp2 HG02922.hp2 HG03209.hp2 others(1): Show HG02258.hp2 HG02922.hp2 HG03209.hp2 NA19043.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0001 a0001c0001t0002	a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0003 others(1): Show a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0003 a0001c0001t0002g0004	4	270	0.0148	-10	c.-10 others(31): Show c.-102+11215_-102+11224delTTTTTTTTTT	BICRAL	ENSG00000112624.14	transcript	ENST00000314073.10	protein_coding	1/12		INFO_REALIGN_3_PRIME	chr6	TogoVar
BICRAL_chr6_42777052_42873556	42794411	CTGTGTGT others(3): Show CTGTGTGTGTG	C C	intron_variant intron_variant	MODIFIER	HG02451.hp1 HG02451.hp1	a0002 a0002	a0002c0003 a0002c0003	a0002c0003t0021 a0002c0003t0021	a0002c0003t0021g0036 a0002c0003t0021g0036	1	270	0.0037	-10	c.-10 others(31): Show c.-102+12344_-102+12353delGTGTGTGTGT	BICRAL	ENSG00000112624.14	transcript	ENST00000314073.10	protein_coding	1/12		INFO_REALIGN_3_PRIME	chr6	TogoVar
BICRAL_chr6_42777052_42873556	42845195	GTTTTTTT others(3): Show GTTTTTTTTTT	G G	intron_variant intron_variant	MODIFIER	HG01071.hp1 HG02145.hp1 HG03017.hp1 others(3): Show HG01071.hp1 HG02145.hp1 HG03017.hp1 HG03491.hp2 NA18963.hp2 NA18983.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(2): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0005 a0001c0001t0006	a0001c0001t0001g0156 a0001c0001t0001g0161 a0001c0001t0002g0146 others(3): Show a0001c0001t0001g0156 a0001c0001t0001g0161 a0001c0001t0002g0146 a0001c0001t0003g0137 a0001c0001t0005g0143 a0001c0001t0006g0023	6	270	0.0222	-10	c.184 others(29): Show c.1840-6853_1840-6844delTTTTTTTTTT	BICRAL	ENSG00000112624.14	transcript	ENST00000314073.10	protein_coding	6/12		INFO_REALIGN_3_PRIME	chr6	TogoVar

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