view | regionname | pos | ref | alt | annotation | impact | samples | ahapids | achapids | acthapids | actghapids | ac | an | af | len | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length
|
cds cds pos length
|
aa aa pos length
|
distance | status | chr | external |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
SCNN1D_chr1_1275436_1297025 | 1288668 | TGTCTCTG others(143): Show |
T | intron_variant | MODIFIER | HG00408.hp2 | a0002 | a0002c0002 | a0002c0002t0001 | a0002c0002t0001g0036 | 1 | 290 | 0.0035 | -150 | c.166 others(17): Show |
SCNN1D | ENSG00000162572.21 | transcript | ENST00000379116.10 | protein_coding | 12/17 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | ||||||
SGSM2_chr17_2332501_2386054 | 2356477 | GTTGGGGG others(143): Show |
G | intron_variant | MODIFIER | HG01106.hp1 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0189 | 1 | 422 | 0.0024 | -150 | c.134 others(17): Show |
SGSM2 | ENSG00000141258.13 | transcript | ENST00000268989.8 | protein_coding | 2/23 | INFO_REALIGN_3_PRIME | chr17 | TogoVar | ||||||
SGSM2_chr17_2332501_2386054 | 2356529 | TGGGGGAA others(143): Show |
T | intron_variant | MODIFIER | HG02056.hp2 | a0001 | a0001c0003 | a0001c0003t0002 | a0001c0003t0002g0119 | 1 | 422 | 0.0024 | -150 | c.134 others(17): Show |
SGSM2 | ENSG00000141258.13 | transcript | ENST00000268989.8 | protein_coding | 2/23 | INFO_REALIGN_3_PRIME | chr17 | TogoVar | ||||||
SH2D1A_chrX_124341563_124378160 | 124350728 | ATATAATA others(143): Show |
A | intron_variant | MODIFIER | HG00639.hp2 HG01081.hp1 HG01167.hp1 others(23): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0003a0001c0001t0004others(1): Show | a0001c0001t0001g0084a0001c0001t0001g0086a0001c0001t0001g0102others(20): Show | 26 | 318 | 0.0818 | -150 | c.137 others(17): Show |
SH2D1A | ENSG00000183918.18 | transcript | ENST00000371139.9 | protein_coding | 1/3 | INFO_REALIGN_3_PRIME | chrX | TogoVar | ||||||
SHC2_chr19_411589_466033 | 427548 | ACAGGGAA others(143): Show |
A | intron_variant | MODIFIER | HG00544.hp2 HG00558.hp1 HG00621.hp1 others(33): Show |
a0001a0002a0004others(1): Show | a0001c0001a0001c0002a0001c0003others(4): Show | a0001c0001t0002a0001c0001t0005a0001c0002t0002others(11): Show | a0001c0001t0002g0052a0001c0001t0005g0047a0001c0002t0002g0046others(32): Show | 36 | 212 | 0.1698 | -150 | c.117 others(19): Show |
SHC2 | ENSG00000129946.11 | transcript | ENST00000264554.11 | protein_coding | 9/12 | chr19 | TogoVar | |||||||
SHOX_chrX_625791_656584 | 629043 | GTCTCTCC others(143): Show |
G | upstream_gene_variant | MODIFIER | HG00323.hp2 HG00544.hp2 HG00558.hp1 others(36): Show |
a0000a0001 | a0000c0002a0001c0001 | a0000c0002t0085a0001c0001t0001a0001c0001t0005others(34): Show | a0000c0002t0085g0045a0001c0001t0001g0007a0001c0001t0005g0054others(35): Show | 39 | 220 | 0.1773 | -150 | c.-18 others(11): Show |
SHOX | ENSG00000185960.15 | transcript | ENST00000686671.1 | protein_coding | 1747 | chrX | TogoVar | |||||||
SHOX_chrX_625791_656584 | 636573 | AGAAATAT others(143): Show |
A | intron_variant | MODIFIER | HG02559.hp1 HG02809.hp1 HG03041.hp1 |
a0001 | a0001c0001 | a0001c0001t0187a0001c0001t0196a0001c0001t0197 | a0001c0001t0187g0071a0001c0001t0196g0158a0001c0001t0197g0143 | 3 | 220 | 0.0136 | -150 | c.486 others(17): Show |
SHOX | ENSG00000185960.15 | transcript | ENST00000686671.1 | protein_coding | 2/4 | chrX | TogoVar | |||||||
SKI_chr1_2223319_2315213 | 2282070 | AGGACGCC others(143): Show |
A | intron_variant | MODIFIER | NA18950.hp1 | a0001 | a0001c0001 | a0001c0001t0008 | a0001c0001t0008g0210 | 1 | 330 | 0.0030 | -150 | c.970 others(19): Show |
SKI | ENSG00000157933.11 | transcript | ENST00000378536.5 | protein_coding | 1/6 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | ||||||
SLC16A9_chr10_59645764_59714850 | 59681492 | GTATATGT others(143): Show |
G | intron_variant | MODIFIER | HG01255.hp1 HG01361.hp1 |
a0001 | a0001c0001 | a0001c0001t0004 | a0001c0001t0004g0034a0001c0001t0004g0035 | 2 | 352 | 0.0057 | -150 | c.196 others(17): Show |
SLC16A9 | ENSG00000165449.12 | transcript | ENST00000395348.8 | protein_coding | 2/5 | chr10 | TogoVar | |||||||
SLC27A4_chr9_128335527_128366470 | 128356700 | AGGAGGCC others(143): Show |
A | intron_variant | MODIFIER | HG00280.hp2 HG00423.hp2 HG01099.hp2 others(75): Show |
a0002a0010 | a0002c0002a0002c0005a0002c0010others(2): Show | a0002c0002t0001a0002c0002t0002a0002c0002t0009others(7): Show | a0002c0002t0001g0003a0002c0002t0001g0005a0002c0002t0001g0012others(45): Show | 78 | 344 | 0.2267 | -150 | c.177 others(18): Show |
SLC27A4 | ENSG00000167114.13 | transcript | ENST00000300456.5 | protein_coding | 12/12 | INFO_REALIGN_3_PRIME | chr9 | TogoVar | ||||||
SLC66A2_chr18_79897420_79956653 | 79920114 | GGGGAGAG others(143): Show |
G | intron_variant | MODIFIER | HG00408.hp1 HG04204.hp1 NA19002.hp2 others(1): Show |
a0001 | a0001c0001 | a0001c0001t0004a0001c0001t0005a0001c0001t0006others(1): Show | a0001c0001t0004g0003a0001c0001t0005g0203a0001c0001t0006g0147others(1): Show | 4 | 352 | 0.0114 | -150 | c.392 others(15): Show |
SLC66A2 | ENSG00000122490.19 | transcript | ENST00000397778.7 | protein_coding | 4/5 | chr18 | TogoVar | |||||||
SLC6A3_chr5_1387794_1450440 | 1422351 | ATGCTGGG others(143): Show |
A | intron_variant | MODIFIER | HG04115.hp2 HG04228.hp2 |
a0001 | a0001c0001a0001c0008 | a0001c0001t0021a0001c0008t0007 | a0001c0001t0021g0352a0001c0008t0007g0351 | 2 | 373 | 0.0054 | -150 | c.654 others(15): Show |
SLC6A3 | ENSG00000142319.18 | transcript | ENST00000270349.12 | protein_coding | 4/14 | chr5 | TogoVar | |||||||
SLC6A3_chr5_1387794_1450440 | 1423006 | CCAGTGCT others(143): Show |
C | intron_variant | MODIFIER | HG04115.hp2 HG04228.hp2 |
a0001 | a0001c0001a0001c0008 | a0001c0001t0021a0001c0008t0007 | a0001c0001t0021g0352a0001c0008t0007g0351 | 2 | 373 | 0.0054 | -150 | c.654 others(16): Show |
SLC6A3 | ENSG00000142319.18 | transcript | ENST00000270349.12 | protein_coding | 4/14 | chr5 | TogoVar | |||||||
SMOC2_chr6_168436184_168672992 | 168567972 | CACAGGCG others(143): Show |
C | intron_variant | MODIFIER | HG01069.hp2 HG02572.hp1 HG02572.hp2 others(4): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0001a0001c0002t0002 | a0001c0001t0001g0124a0001c0001t0001g0164a0001c0002t0002g0032others(4): Show | 7 | 180 | 0.0389 | -150 | c.637 others(19): Show |
SMOC2 | ENSG00000112562.20 | transcript | ENST00000356284.7 | protein_coding | 7/12 | INFO_REALIGN_3_PRIME | chr6 | TogoVar | ||||||
SMOC2_chr6_168436184_168672992 | 168568045 | GCCACAGG others(143): Show |
G | intron_variant | MODIFIER | NA21309.hp1 | a0001 | a0001c0002 | a0001c0002t0008 | a0001c0002t0008g0045 | 1 | 180 | 0.0056 | -150 | c.637 others(19): Show |
SMOC2 | ENSG00000112562.20 | transcript | ENST00000356284.7 | protein_coding | 7/12 | INFO_REALIGN_3_PRIME | chr6 | TogoVar | ||||||
SMOC2_chr6_168436184_168672992 | 168592681 | GGGCATCT others(143): Show |
G | intron_variant | MODIFIER | NA20905.hp1 | a0001 | a0001c0002 | a0001c0002t0002 | a0001c0002t0002g0066 | 1 | 180 | 0.0056 | -150 | c.638 others(17): Show |
SMOC2 | ENSG00000112562.20 | transcript | ENST00000356284.7 | protein_coding | 7/12 | chr6 | TogoVar | |||||||
SMOC2_chr6_168436184_168672992 | 168594426 | GCATCTTT others(143): Show |
G | intron_variant | MODIFIER | HG02559.hp1 | a0001 | a0001c0002 | a0001c0002t0002 | a0001c0002t0002g0035 | 1 | 180 | 0.0056 | -150 | c.638 others(17): Show |
SMOC2 | ENSG00000112562.20 | transcript | ENST00000356284.7 | protein_coding | 7/12 | chr6 | TogoVar | |||||||
SPOCK3_chr4_166728384_167239494 | 167222983 | TTATATTT others(143): Show |
T | intron_variant | MODIFIER | HG01261.hp1 HG02257.hp1 NA20805.hp1 |
a0001a0003 | a0001c0001a0003c0007 | a0001c0001t0001a0001c0001t0013a0003c0007t0001 | a0001c0001t0001g0066a0001c0001t0013g0062a0003c0007t0001g0073 | 3 | 144 | 0.0208 | -150 | c.189 others(19): Show |
SPOCK3 | ENSG00000196104.11 | transcript | ENST00000357545.9 | protein_coding | 2/10 | chr4 | TogoVar | |||||||
SPON1_chr11_13957723_14273133 | 14160457 | ATATATAT others(143): Show |
A | intron_variant | MODIFIER | HG00323.hp1 HG01109.hp2 HG02074.hp1 others(3): Show |
a0001 | a0001c0001a0001c0002a0001c0003others(1): Show | a0001c0001t0001a0001c0001t0003a0001c0002t0001others(2): Show | a0001c0001t0001g0027a0001c0001t0003g0181a0001c0002t0001g0003others(3): Show | 6 | 224 | 0.0268 | -150 | c.825 others(19): Show |
SPON1 | ENSG00000262655.4 | transcript | ENST00000576479.4 | protein_coding | 6/15 | INFO_REALIGN_3_PRIME | chr11 | TogoVar | ||||||
STK32B_chr4_5046480_5505989 | 5316388 | AATATATT others(143): Show |
A | intron_variant | MODIFIER | HG00438.hp2 | a0001 | a0001c0001 | a0001c0001t0003 | a0001c0001t0003g0091 | 1 | 170 | 0.0059 | -150 | c.261 others(19): Show |
STK32B | ENSG00000152953.13 | transcript | ENST00000282908.10 | protein_coding | 3/11 | INFO_REALIGN_3_PRIME | chr4 | TogoVar | ||||||
SUN1_chr7_827476_879934 | 876314 | CCACGTGT others(143): Show |
C | downstream_gene_variant | MODIFIER | HG02257.hp2 HG02559.hp1 HG02965.hp2 others(10): Show |
a0001a0002a0018others(1): Show | a0001c0006a0002c0002a0018c0027others(1): Show | a0001c0006t0001a0002c0002t0001a0018c0027t0001others(1): Show | a0001c0006t0001g0039a0001c0006t0001g0040a0001c0006t0001g0049others(10): Show | 13 | 418 | 0.0311 | -150 | c.*29 others(11): Show |
SUN1 | ENSG00000164828.18 | transcript | ENST00000401592.6 | protein_coding | 1381 | chr7 | TogoVar | |||||||
TAF13_chr1_109059140_109081003 | 109071971 | TATATACA others(143): Show |
T | intron_variant | MODIFIER | HG00741.hp2 HG01167.hp2 HG01891.hp1 others(7): Show |
a0001 | a0001c0001 | a0001c0001t0002a0001c0001t0003a0001c0001t0004others(3): Show | a0001c0001t0002g0156a0001c0001t0003g0033a0001c0001t0003g0157others(6): Show | 10 | 414 | 0.0242 | -150 | c.106 others(17): Show |
TAF13 | ENSG00000197780.11 | transcript | ENST00000338366.6 | protein_coding | 2/3 | chr1 | TogoVar | |||||||
TBC1D9_chr4_140615782_140761385 | 140760519 | CACGCTTC others(143): Show |
C | upstream_gene_variant | MODIFIER | NA19009.hp2 | a0001 | a0001c0001 | a0001c0001t0003 | a0001c0001t0003g0279 | 1 | 298 | 0.0034 | -150 | c.-46 others(11): Show |
TBC1D9 | ENSG00000109436.8 | transcript | ENST00000442267.3 | protein_coding | 4135 | chr4 | TogoVar | |||||||
TCF12_chr15_56913644_57294853 | 57170641 | TAATATAT others(143): Show |
T | intron_variant | MODIFIER | HG00099.hp2 HG00741.hp2 HG01175.hp1 others(16): Show |
a0001 | a0001c0001 | a0001c0001t0002a0001c0001t0033 | a0001c0001t0002g0003a0001c0001t0002g0235a0001c0001t0002g0236others(16): Show | 19 | 330 | 0.0576 | -150 | c.390 others(17): Show |
TCF12 | ENSG00000140262.18 | transcript | ENST00000333725.10 | protein_coding | 6/20 | INFO_REALIGN_3_PRIME | chr15 | TogoVar | ||||||
TENM2_chr5_166974029_168269157 | 167974177 | GAGGAAGG others(143): Show |
G | intron_variant | MODIFIER | HG02145.hp1 HG02451.hp2 HG02615.hp1 others(6): Show |
a0001a0002a0004others(2): Show | a0001c0003a0001c0027a0001c0029others(5): Show | a0001c0003t0022a0001c0027t0002a0001c0029t0003others(6): Show | a0001c0003t0022g0020a0001c0027t0002g0031a0001c0029t0003g0019others(6): Show | 9 | 54 | 0.1667 | -150 | c.948 others(19): Show |
TENM2 | ENSG00000145934.17 | transcript | ENST00000518659.6 | protein_coding | 6/30 | INFO_REALIGN_3_PRIME | chr5 | TogoVar | ||||||
TMCC1_chr3_129642792_129898711 | 129818401 | TAAGAAAC others(143): Show |
T | intron_variant | MODIFIER | HG00280.hp1 HG00280.hp2 HG00423.hp1 others(61): Show |
a0001a0002 | a0001c0001a0001c0004a0002c0003 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(11): Show | a0001c0001t0001g0033a0001c0001t0001g0037a0001c0001t0001g0040others(61): Show | 64 | 258 | 0.2481 | -150 | c.576 others(17): Show |
TMCC1 | ENSG00000172765.19 | transcript | ENST00000393238.8 | protein_coding | 4/6 | chr3 | TogoVar | |||||||
TMEM63C_chr14_77176798_77264495 | 77235535 | GGAGGATC others(143): Show |
G | intron_variant | MODIFIER | HG01081.hp1 HG02647.hp2 HG02717.hp2 others(7): Show |
a0001a0003 | a0001c0001a0001c0021a0003c0008 | a0001c0001t0004a0001c0001t0008a0001c0001t0011others(3): Show | a0001c0001t0004g0190a0001c0001t0008g0263a0001c0001t0011g0201others(7): Show | 10 | 322 | 0.0311 | -150 | c.543 others(16): Show |
TMEM63C | ENSG00000165548.11 | transcript | ENST00000298351.5 | protein_coding | 8/23 | INFO_REALIGN_3_PRIME | chr14 | TogoVar | ||||||
TNC_chr9_115014575_115123157 | 115095510 | ATATGTAT others(143): Show |
A | intron_variant | MODIFIER | HG00408.hp1 HG00408.hp2 HG00423.hp2 others(38): Show |
a0002a0007a0010others(8): Show | a0002c0001a0007c0006a0007c0086others(10): Show | a0002c0001t0007a0007c0006t0003a0007c0006t0007others(15): Show | a0002c0001t0007g0018a0007c0006t0003g0028a0007c0006t0003g0052others(37): Show | 41 | 366 | 0.1120 | -150 | c.-13 others(19): Show |
TNC | ENSG00000041982.17 | transcript | ENST00000350763.9 | protein_coding | 1/27 | chr9 | TogoVar | |||||||
TNC_chr9_115014575_115123157 | 115095532 | ATATGTAT others(143): Show |
A | intron_variant | MODIFIER | NA18956.hp1 | a0010 | a0010c0008 | a0010c0008t0003 | a0010c0008t0003g0034 | 1 | 366 | 0.0027 | -150 | c.-13 others(19): Show |
TNC | ENSG00000041982.17 | transcript | ENST00000350763.9 | protein_coding | 1/27 | chr9 | TogoVar | |||||||
TNK2_chr3_195858364_195913551 | 195880618 | CCCCCCCA others(143): Show |
C | intron_variant | MODIFIER | HG02132.hp1 HG02165.hp2 HG04115.hp2 |
a0001a0003 | a0001c0003a0003c0054 | a0001c0003t0005a0003c0054t0001 | a0001c0003t0005g0197a0001c0003t0005g0199a0003c0054t0001g0134 | 3 | 372 | 0.0081 | -150 | c.887 others(17): Show |
TNK2 | ENSG00000061938.21 | transcript | ENST00000672887.2 | protein_coding | 6/15 | chr3 | TogoVar | |||||||
TPO_chr2_1408463_1548673 | 1489946 | GAGCAGTG others(143): Show |
G | intron_variant | MODIFIER | NA19043.hp2 | a0007 | a0007c0026 | a0007c0026t0003 | a0007c0026t0003g0052 | 1 | 130 | 0.0077 | -150 | c.176 others(19): Show |
TPO | ENSG00000115705.22 | transcript | ENST00000329066.9 | protein_coding | 10/16 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||||
TPO_chr2_1408463_1548673 | 1490218 | AGGGTCCC others(143): Show |
A | intron_variant | MODIFIER | HG02080.hp2 HG03654.hp2 HG04204.hp2 others(4): Show |
a0003 | a0003c0003a0003c0006 | a0003c0003t0001a0003c0003t0004a0003c0003t0005others(1): Show | a0003c0003t0001g0046a0003c0003t0004g0016a0003c0003t0005g0001others(3): Show | 7 | 130 | 0.0539 | -150 | c.176 others(19): Show |
TPO | ENSG00000115705.22 | transcript | ENST00000329066.9 | protein_coding | 10/16 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||||
TULP4_chr6_158307465_158516828 | 158349473 | GATGGGTT others(143): Show |
G | intron_variant | MODIFIER | HG01255.hp1 HG01884.hp1 HG02738.hp1 |
a0001 | a0001c0001a0001c0007a0001c0009 | a0001c0001t0002a0001c0007t0019a0001c0009t0082 | a0001c0001t0002g0121a0001c0007t0019g0124a0001c0009t0082g0125 | 3 | 268 | 0.0112 | -150 | c.252 others(19): Show |
TULP4 | ENSG00000130338.13 | transcript | ENST00000367097.8 | protein_coding | 1/13 | chr6 | TogoVar | |||||||
TWIST2_chr2_238843085_238915534 | 238871185 | ACACACAC others(143): Show |
A | intron_variant | MODIFIER | NA20300.hp1 | a0001 | a0001c0001 | a0001c0001t0003 | a0001c0001t0003g0231 | 1 | 338 | 0.0030 | -150 | c.*35 others(19): Show |
TWIST2 | ENSG00000233608.5 | transcript | ENST00000612363.2 | protein_coding | 1/1 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||||
TYMS_chr18_652653_678578 | 666891 | AGATGGTG others(143): Show |
A | intron_variant | MODIFIER | HG00438.hp2 HG00544.hp1 HG01346.hp2 others(22): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(5): Show | a0001c0001t0001g0044a0001c0001t0001g0090a0001c0001t0001g0156others(21): Show | 25 | 482 | 0.0519 | -150 | c.455 others(17): Show |
TYMS | ENSG00000176890.16 | transcript | ENST00000323274.15 | protein_coding | 3/6 | INFO_REALIGN_3_PRIME | chr18 | TogoVar | ||||||
TYMS_chr18_652653_678578 | 667226 | GTGATGGA others(143): Show |
G | intron_variant | MODIFIER | HG03486.hp1 | a0001 | a0001c0001 | a0001c0001t0010 | a0001c0001t0010g0410 | 1 | 482 | 0.0021 | -150 | c.455 others(17): Show |
TYMS | ENSG00000176890.16 | transcript | ENST00000323274.15 | protein_coding | 3/6 | chr18 | TogoVar | |||||||
TYW3_chr1_74728152_74771677 | 74732048 | CTGGGCTG others(143): Show |
C | upstream_gene_variant | MODIFIER | HG04115.hp2 | a0001 | a0001c0001 | a0001c0001t0005 | a0001c0001t0005g0133 | 1 | 332 | 0.0030 | -150 | c.-11 others(11): Show |
TYW3 | ENSG00000162623.16 | transcript | ENST00000370867.8 | protein_coding | 1103 | chr1 | TogoVar | |||||||
UMODL1_chr21_42066317_42147996 | 42078116 | CCAACACC others(143): Show |
C | intron_variant | MODIFIER | HG02602.hp1 | a0013 | a0013c0163 | a0013c0163t0005 | a0013c0163t0005g0139 | 1 | 400 | 0.0025 | -150 | c.319 others(17): Show |
UMODL1 | ENSG00000177398.19 | transcript | ENST00000408910.7 | protein_coding | 2/22 | INFO_REALIGN_3_PRIME | chr21 | TogoVar | ||||||
UMODL1_chr21_42066317_42147996 | 42078435 | CAGAAACC others(143): Show |
C | intron_variant | MODIFIER | NA19087.hp1 | a0038 | a0038c0065 | a0038c0065t0001 | a0038c0065t0001g0262 | 1 | 400 | 0.0025 | -150 | c.319 others(17): Show |
UMODL1 | ENSG00000177398.19 | transcript | ENST00000408910.7 | protein_coding | 2/22 | INFO_REALIGN_3_PRIME | chr21 | TogoVar | ||||||
UMODL1_chr21_42066317_42147996 | 42078496 | TGGGGCCA others(143): Show |
T | intron_variant | MODIFIER | HG02074.hp1 HG02615.hp2 HG04184.hp1 others(1): Show |
a0001a0019a0059others(1): Show | a0001c0008a0019c0016a0059c0168others(1): Show | a0001c0008t0001a0019c0016t0004a0059c0168t0020others(1): Show | a0001c0008t0001g0211a0019c0016t0004g0178a0059c0168t0020g0150others(1): Show | 4 | 400 | 0.0100 | -150 | c.319 others(17): Show |
UMODL1 | ENSG00000177398.19 | transcript | ENST00000408910.7 | protein_coding | 2/22 | INFO_REALIGN_3_PRIME | chr21 | TogoVar | ||||||
UNC5A_chr5_176805559_176885898 | 176859181 | GGCTGCTA others(143): Show |
G | intron_variant | MODIFIER | NA19002.hp1 NA19057.hp2 |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0138a0001c0001t0001g0139 | 2 | 268 | 0.0075 | -150 | c.71- others(15): Show |
UNC5A | ENSG00000113763.12 | transcript | ENST00000329542.9 | protein_coding | 1/14 | INFO_REALIGN_3_PRIME | chr5 | TogoVar | ||||||
UNC5A_chr5_176805559_176885898 | 176859484 | AGCTGCTA others(143): Show |
A | intron_variant | MODIFIER | HG01243.hp1 HG01884.hp2 HG02055.hp2 others(13): Show |
a0001 | a0001c0001a0001c0004 | a0001c0001t0001a0001c0001t0002a0001c0001t0008others(1): Show | a0001c0001t0001g0014a0001c0001t0001g0016a0001c0001t0001g0018others(13): Show | 16 | 268 | 0.0597 | -150 | c.71- others(15): Show |
UNC5A | ENSG00000113763.12 | transcript | ENST00000329542.9 | protein_coding | 1/14 | INFO_REALIGN_3_PRIME | chr5 | TogoVar | ||||||
UNC5B_chr10_71207570_71307864 | 71296709 | CCAGATAT others(143): Show |
C | frameshift_variant others(3): Show |
HIGH | HG02630.hp2 HG03209.hp1 HG03225.hp1 |
a0011a0018 | a0011c0014a0018c0022 | a0011c0014t0018a0018c0022t0018 | a0011c0014t0018g0010a0011c0014t0018g0106a0018c0022t0018g0186 | 3 | 368 | 0.0082 | -150 | c.247 others(13): Show |
p.His others(5): Show |
UNC5B | ENSG00000107731.12 | transcript | ENST00000335350.10 | protein_coding | 15/17 | 2891/6841 | 2475/2838 | 825/945 | INFO_REALIGN_3_PRIME | chr10 | TogoVar | ||
UNC5D_chr8_35230475_35801540 | 35271323 | GCATACAC others(143): Show |
G | intron_variant | MODIFIER | HG02622.hp2 | a0001 | a0001c0006 | a0001c0006t0004 | a0001c0006t0004g0031 | 1 | 64 | 0.0156 | -150 | c.103 others(19): Show |
UNC5D | ENSG00000156687.11 | transcript | ENST00000404895.7 | protein_coding | 1/16 | chr8 | TogoVar | |||||||
USP40_chr2_233470526_233571782 | 233568296 | TTATATAA others(143): Show |
T | upstream_gene_variant | MODIFIER | HG02055.hp1 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0174 | 1 | 324 | 0.0031 | -150 | c.-17 others(11): Show |
USP40 | ENSG00000085982.16 | transcript | ENST00000678225.2 | protein_coding | 1515 | chr2 | TogoVar | |||||||
VCX3B_chrX_8459830_8471510 | 8465970 | CTGGAGGA others(143): Show |
C | conservative_inframe_deletion | MODERATE | HG00280.hp1 HG00323.hp2 HG00408.hp1 others(56): Show |
a0001a0013a0023others(6): Show | a0001c0001a0001c0060a0001c0088others(8): Show | a0001c0001t0001a0001c0001t0008a0001c0001t0010others(15): Show | a0001c0001t0001g0001a0001c0001t0001g0007a0001c0001t0001g0014others(23): Show | 59 | 271 | 0.2177 | -150 | c.478 others(7): Show |
p.Val others(13): Show |
VCX3B | ENSG00000205642.11 | transcript | ENST00000381032.6 | protein_coding | 3/3 | 785/1175 | 478/741 | 160/246 | INFO_REALIGN_3_PRIME | chrX | TogoVar | ||
VCX3B_chrX_8459830_8471510 | 8466125 | GGAACCAC others(143): Show |
G | conservative_inframe_deletion | MODERATE | HG01081.hp2 HG03017.hp1 NA18969.hp1 |
a0060a0063a0080 | a0060c0093a0063c0094a0080c0097 | a0060c0093t0004a0063c0094t0001a0080c0097t0001 | a0060c0093t0004g0002a0063c0094t0001g0007a0080c0097t0001g0007 | 3 | 271 | 0.0111 | -150 | c.505 others(7): Show |
p.Glu others(13): Show |
VCX3B | ENSG00000205642.11 | transcript | ENST00000381032.6 | protein_coding | 3/3 | 812/1175 | 505/741 | 169/246 | INFO_REALIGN_3_PRIME | chrX | TogoVar | ||
VCX3B_chrX_8459830_8471510 | 8466185 | GGAACCAC others(143): Show |
G | conservative_inframe_deletion | MODERATE | HG00140.hp1 | a0066 | a0066c0082 | a0066c0082t0004 | a0066c0082t0004g0002 | 1 | 271 | 0.0037 | -150 | c.568 others(7): Show |
p.Val others(13): Show |
VCX3B | ENSG00000205642.11 | transcript | ENST00000381032.6 | protein_coding | 3/3 | 875/1175 | 568/741 | 190/246 | INFO_REALIGN_3_PRIME | chrX | TogoVar | ||
ZFYVE28_chr4_2264597_2423645 | 2396430 | GGGGTGTC others(143): Show |
G | intron_variant | MODIFIER | HG02145.hp1 | a0003 | a0003c0008 | a0003c0008t0003 | a0003c0008t0003g0074 | 1 | 290 | 0.0035 | -150 | c.39+ others(17): Show |
ZFYVE28 | ENSG00000159733.14 | transcript | ENST00000290974.7 | protein_coding | 1/12 | chr4 | TogoVar | |||||||
ZNF200_chr16_3217325_3240158 | 3235608 | CGCCCTAC others(143): Show |
C | upstream_gene_variant | MODIFIER | HG01109.hp2 NA20129.hp1 |
a0001 | a0001c0006 | a0001c0006t0012 | a0001c0006t0012g0043a0001c0006t0012g0044 | 2 | 390 | 0.0051 | -150 | c.-85 others(9): Show |
ZNF200 | ENSG00000010539.12 | transcript | ENST00000414144.7 | protein_coding | 451 | chr16 | TogoVar |