regionname | pos | ref | alt | annotation | impact | samples | ahapids | achapids | acthapids | actghapids | ac | an | af | len | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length
|
cds cds pos length
|
aa aa pos length
|
distance | status | chr | external |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
GOLGA3_chr12_132763914_132833869 | 132779814 | TGCACACA others(191): Show |
T | intron_variant | MODIFIER | HG02818.hp2 HG02896.hp1 NA18522.hp1 |
a0001a0009 | a0001c0001a0009c0015 | a0001c0001t0071a0009c0015t0078a0009c0015t0080 | a0001c0001t0071g0050a0009c0015t0078g0066a0009c0015t0080g0065 | 3 | 308 | 0.0097 | -198 | c.358 others(17): Show |
GOLGA3 | ENSG00000090615.16 | transcript | ENST00000450791.8 | protein_coding | 18/23 | chr12 | TogoVar | ||||||
GOLGA3_chr12_132763914_132833869 | 132817635 | GGTGAACC others(191): Show |
G | intron_variant | MODIFIER | HG00423.hp2 HG01167.hp1 HG01169.hp1 others(7): Show |
a0001a0002a0018 | a0001c0001a0002c0002a0018c0029 | a0001c0001t0001a0001c0001t0003a0002c0002t0002others(3): Show | a0001c0001t0001g0045a0001c0001t0001g0046a0001c0001t0003g0112others(7): Show | 10 | 308 | 0.0325 | -198 | c.134 others(16): Show |
GOLGA3 | ENSG00000090615.16 | transcript | ENST00000450791.8 | protein_coding | 2/23 | chr12 | TogoVar | ||||||
HACL1_chr3_15555699_15606569 | 15592577 | CATGTGTG others(191): Show |
C | intron_variant | MODIFIER | HG02886.hp1 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0079 | 1 | 428 | 0.0023 | -198 | c.228 others(16): Show |
HACL1 | ENSG00000131373.15 | transcript | ENST00000321169.10 | protein_coding | 3/16 | chr3 | TogoVar | ||||||
IL3RA_chrX_1331785_1387689 | 1365265 | TGCGGGGT others(191): Show |
T | intron_variant | MODIFIER | HG01069.hp1 HG01070.hp1 HG02451.hp1 others(1): Show |
a0001 | a0001c0001 | a0001c0001t0006 | a0001c0001t0006g0078a0001c0001t0006g0085a0001c0001t0006g0086others(1): Show | 4 | 115 | 0.0348 | -198 | c.874 others(14): Show |
IL3RA | ENSG00000185291.12 | transcript | ENST00000331035.10 | protein_coding | 9/11 | INFO_REALIGN_3_PRIME | chrX | TogoVar | |||||
IQGAP2_chr5_76398285_76713132 | 76699605 | TTCTCTCT others(191): Show |
T | intron_variant | MODIFIER | HG01258.hp1 HG02630.hp2 |
a0001 | a0001c0002a0001c0003 | a0001c0002t0002a0001c0003t0002 | a0001c0002t0002g0116a0001c0003t0002g0073 | 2 | 222 | 0.0090 | -198 | c.436 others(19): Show |
IQGAP2 | ENSG00000145703.17 | transcript | ENST00000274364.11 | protein_coding | 33/35 | INFO_REALIGN_3_PRIME | chr5 | TogoVar | |||||
ITIH2_chr10_7698316_7754520 | 7737747 | AATATTCT others(191): Show |
A | intron_variant | MODIFIER | HG01891.hp1 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0223 | 1 | 380 | 0.0026 | -198 | c.195 others(17): Show |
ITIH2 | ENSG00000151655.19 | transcript | ENST00000358415.9 | protein_coding | 15/20 | INFO_REALIGN_3_PRIME | chr10 | TogoVar | |||||
ITIH5_chr10_7554270_7671966 | 7593499 | CCCCTGTA others(191): Show |
C | intron_variant | MODIFIER | HG03486.hp1 HG03579.hp2 |
a0001 | a0001c0032a0001c0054 | a0001c0032t0001a0001c0054t0001 | a0001c0032t0001g0277a0001c0054t0001g0009 | 2 | 342 | 0.0059 | -198 | c.940 others(17): Show |
ITIH5 | ENSG00000123243.15 | transcript | ENST00000397146.7 | protein_coding | 7/13 | chr10 | TogoVar | ||||||
KBTBD11_chr8_1968677_2011936 | 1990800 | GTGCTGCG others(191): Show |
G | intron_variant | MODIFIER | HG02602.hp1 NA19043.hp1 |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0003 | a0001c0001t0001g0202a0001c0001t0003g0042 | 2 | 389 | 0.0051 | -198 | c.-90 others(19): Show |
KBTBD11 | ENSG00000176595.4 | transcript | ENST00000320248.4 | protein_coding | 1/1 | INFO_REALIGN_3_PRIME | chr8 | TogoVar | |||||
KBTBD11_chr8_1968677_2011936 | 1990840 | GGGGCCTT others(191): Show |
G | intron_variant | MODIFIER | NA18948.hp1 NA18971.hp2 NA18992.hp1 |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0011a0001c0001t0001g0249 | 3 | 389 | 0.0077 | -198 | c.-90 others(19): Show |
KBTBD11 | ENSG00000176595.4 | transcript | ENST00000320248.4 | protein_coding | 1/1 | INFO_REALIGN_3_PRIME | chr8 | TogoVar | |||||
KBTBD11_chr8_1968677_2011936 | 1990866 | GTGCTGCG others(191): Show |
G | intron_variant | MODIFIER | HG00639.hp2 HG00738.hp2 HG00741.hp2 others(6): Show |
a0001 | a0001c0001 | a0001c0001t0005a0001c0001t0009a0001c0001t0016others(2): Show | a0001c0001t0005g0167a0001c0001t0009g0362a0001c0001t0009g0363others(6): Show | 9 | 389 | 0.0231 | -198 | c.-90 others(19): Show |
KBTBD11 | ENSG00000176595.4 | transcript | ENST00000320248.4 | protein_coding | 1/1 | INFO_REALIGN_3_PRIME | chr8 | TogoVar | |||||
KBTBD3_chr11_106046098_106082347 | 106061843 | TAGTACAA others(191): Show |
T | intron_variant | MODIFIER | HG03471.hp1 HG03486.hp1 |
a0001 | a0001c0001 | a0001c0001t0006 | a0001c0001t0006g0035 | 2 | 366 | 0.0055 | -198 | c.-12 others(17): Show |
KBTBD3 | ENSG00000182359.15 | transcript | ENST00000531837.2 | protein_coding | 2/3 | chr11 | TogoVar | ||||||
KCNIP4_chr4_20723606_21953772 | 20931872 | GATAATAG others(191): Show |
G | intron_variant | MODIFIER | HG02622.hp1 HG02965.hp2 |
a0001 | a0001c0001 | a0001c0001t0002a0001c0001t0003 | a0001c0001t0002g0001a0001c0001t0003g0018 | 2 | 80 | 0.0250 | -198 | c.62- others(17): Show |
KCNIP4 | ENSG00000185774.17 | transcript | ENST00000382152.7 | protein_coding | 1/8 | chr4 | TogoVar | ||||||
KCNQ2_chr20_63395208_63477655 | 63432126 | AGGGAAGG others(191): Show |
A | intron_variant | MODIFIER | HG03471.hp1 NA18522.hp1 |
a0001 | a0001c0002 | a0001c0002t0012a0001c0002t0080 | a0001c0002t0012g0037a0001c0002t0080g0236 | 2 | 330 | 0.0061 | -198 | c.111 others(17): Show |
KCNQ2 | ENSG00000075043.21 | transcript | ENST00000359125.7 | protein_coding | 8/16 | chr20 | TogoVar | ||||||
LATS2_chr13_20968036_21066586 | 21007538 | ATATATAG others(191): Show |
A | intron_variant | MODIFIER | HG00639.hp1 | a0002 | a0002c0024 | a0002c0024t0023 | a0002c0024t0023g0038 | 1 | 316 | 0.0032 | -198 | c.343 others(19): Show |
LATS2 | ENSG00000150457.9 | transcript | ENST00000382592.5 | protein_coding | 2/7 | chr13 | TogoVar | ||||||
LTBP1_chr2_32941953_33404509 | 33057076 | CACAGAGT others(191): Show |
C | intron_variant | MODIFIER | HG00738.hp1 HG02602.hp2 |
a0001a0006 | a0001c0003a0006c0036 | a0001c0003t0005a0006c0036t0002 | a0001c0003t0005g0146a0006c0036t0002g0118 | 2 | 164 | 0.0122 | -198 | c.863 others(19): Show |
LTBP1 | ENSG00000049323.16 | transcript | ENST00000404816.7 | protein_coding | 3/33 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | |||||
MAD1L1_chr7_1810795_2237945 | 1827545 | GCCTCCCC others(191): Show |
G | intron_variant | MODIFIER | HG02055.hp1 HG02630.hp2 HG02647.hp1 others(4): Show |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0145a0001c0001t0001g0151a0001c0001t0001g0152others(4): Show | 7 | 264 | 0.0265 | -198 | c.199 others(21): Show |
MAD1L1 | ENSG00000002822.16 | transcript | ENST00000265854.12 | protein_coding | 18/18 | chr7 | TogoVar | ||||||
MAD1L1_chr7_1810795_2237945 | 2161827 | ACCGGCCG others(191): Show |
A | intron_variant | MODIFIER | HG01891.hp2 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0164 | 1 | 264 | 0.0038 | -198 | c.987 others(19): Show |
MAD1L1 | ENSG00000002822.16 | transcript | ENST00000265854.12 | protein_coding | 10/18 | chr7 | TogoVar | ||||||
MCF2L_chr13_112964214_113104742 | 113069245 | GCCAGCTA others(191): Show |
G | intron_variant | MODIFIER | HG02145.hp2 HG03098.hp1 |
a0001 | a0001c0005a0001c0012 | a0001c0005t0025a0001c0012t0031 | a0001c0005t0025g0016a0001c0012t0031g0021 | 2 | 116 | 0.0172 | -198 | c.882 others(15): Show |
MCF2L | ENSG00000126217.22 | transcript | ENST00000535094.7 | protein_coding | 8/29 | INFO_REALIGN_3_PRIME | chr13 | TogoVar | |||||
MEGF6_chr1_3482951_3616508 | 3591611 | GGCGAGGG others(191): Show |
G | intron_variant | MODIFIER | HG03540.hp2 | a0052 | a0052c0096 | a0052c0096t0007 | a0052c0096t0007g0229 | 1 | 292 | 0.0034 | -198 | c.376 others(17): Show |
MEGF6 | ENSG00000162591.17 | transcript | ENST00000356575.9 | protein_coding | 3/36 | chr1 | TogoVar | ||||||
METAP1D_chr2_171994953_172087430 | 172042504 | TATACATA others(191): Show |
T | intron_variant | MODIFIER | HG00140.hp1 HG02922.hp2 |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0285a0001c0001t0001g0301 | 2 | 356 | 0.0056 | -198 | c.41- others(17): Show |
METAP1D | ENSG00000172878.14 | transcript | ENST00000315796.5 | protein_coding | 1/9 | chr2 | TogoVar | ||||||
MLPH_chr2_237482251_237560322 | 237544441 | GGTAGTGA others(191): Show |
G | intron_variant | MODIFIER | NA19010.hp2 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0179 | 1 | 286 | 0.0035 | -198 | c.153 others(19): Show |
MLPH | ENSG00000115648.14 | transcript | ENST00000264605.8 | protein_coding | 12/15 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | |||||
MYO1F_chr19_8515778_8582442 | 8543699 | GTGGTGGT others(191): Show |
G | intron_variant | MODIFIER | HG01168.hp1 HG01169.hp2 |
a0001 | a0001c0001 | a0001c0001t0002 | a0001c0001t0002g0064a0001c0001t0002g0065 | 2 | 342 | 0.0059 | -198 | c.152 others(17): Show |
MYO1F | ENSG00000142347.20 | transcript | ENST00000644032.2 | protein_coding | 14/27 | chr19 | TogoVar | ||||||
MYT1L_chr2_1784113_2336275 | 2185798 | GGGCCTTC others(191): Show |
G | intron_variant | MODIFIER | HG02280.hp1 | a0001 | a0001c0004 | a0001c0004t0009 | a0001c0004t0009g0001 | 1 | 104 | 0.0096 | -198 | c.-42 others(21): Show |
MYT1L | ENSG00000186487.21 | transcript | ENST00000647738.2 | protein_coding | 2/24 | chr2 | TogoVar | ||||||
MYZAP_chr15_57586904_57690364 | 57688134 | TGTGTGTA others(191): Show |
T | downstream_gene_variant | MODIFIER | HG02451.hp2 HG02896.hp1 |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0013a0001c0001t0001g0218 | 2 | 352 | 0.0057 | -198 | c.*36 others(11): Show |
MYZAP | ENSG00000263155.6 | transcript | ENST00000267853.10 | protein_coding | 2771 | chr15 | TogoVar | ||||||
NDC80_chr18_2566557_2621635 | 2614459 | GAAAGAAA others(191): Show |
G | intron_variant | MODIFIER | HG00438.hp2 HG00597.hp2 HG01167.hp2 others(42): Show |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0002a0001c0001t0001g0004a0001c0001t0001g0005others(39): Show | 45 | 402 | 0.1119 | -198 | c.179 others(19): Show |
NDC80 | ENSG00000080986.13 | transcript | ENST00000261597.9 | protein_coding | 16/16 | INFO_REALIGN_3_PRIME | chr18 | TogoVar | |||||
NEU4_chr2_241804193_241822413 | 241807488 | CCTTCCCT others(191): Show |
C | upstream_gene_variant | MODIFIER | HG02148.hp1 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0001 | 1 | 319 | 0.0031 | -198 | c.-17 others(11): Show |
NEU4 | ENSG00000204099.12 | transcript | ENST00000407683.6 | protein_coding | 1704 | chr2 | TogoVar | ||||||
NFATC1_chr18_79390930_79534323 | 79525279 | CGTTACCT others(191): Show |
C | intron_variant | MODIFIER | HG01074.hp1 HG01106.hp2 HG02027.hp2 others(8): Show |
a0001a0002 | a0001c0005a0001c0055a0002c0002others(2): Show | a0001c0005t0005a0001c0005t0011a0001c0055t0045others(3): Show | a0001c0005t0005g0055a0001c0005t0011g0134a0001c0005t0011g0135others(7): Show | 11 | 322 | 0.0342 | -198 | c.278 others(19): Show |
NFATC1 | ENSG00000131196.18 | transcript | ENST00000427363.7 | protein_coding | 9/9 | INFO_REALIGN_3_PRIME | chr18 | TogoVar | |||||
NFATC1_chr18_79390930_79534323 | 79525292 | TCCTCCCC others(191): Show |
T | intron_variant | MODIFIER | HG01243.hp1 HG01243.hp2 HG02145.hp2 others(10): Show |
a0001 | a0001c0004a0001c0005a0001c0010others(4): Show | a0001c0004t0004a0001c0005t0005a0001c0010t0005others(6): Show | a0001c0004t0004g0078a0001c0004t0004g0282a0001c0005t0005g0056others(10): Show | 13 | 322 | 0.0404 | -198 | c.278 others(19): Show |
NFATC1 | ENSG00000131196.18 | transcript | ENST00000427363.7 | protein_coding | 9/9 | INFO_REALIGN_3_PRIME | chr18 | TogoVar | |||||
NOL10_chr2_10565754_10694975 | 10587062 | TATATACA others(191): Show |
T | intron_variant | MODIFIER | NA18522.hp1 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0007 | 1 | 372 | 0.0027 | -198 | c.184 others(19): Show |
NOL10 | ENSG00000115761.17 | transcript | ENST00000381685.10 | protein_coding | 19/20 | chr2 | TogoVar | ||||||
NPAS1_chr19_47014837_47050775 | 47027448 | CTCTGCCC others(191): Show |
C | intron_variant | MODIFIER | HG01433.hp1 HG02572.hp2 HG02615.hp1 others(2): Show |
a0001 | a0001c0001a0001c0002a0001c0003 | a0001c0001t0001a0001c0002t0001a0001c0003t0001 | a0001c0001t0001g0395a0001c0002t0001g0155a0001c0002t0001g0189others(2): Show | 5 | 418 | 0.0120 | -198 | c.359 others(17): Show |
NPAS1 | ENSG00000130751.10 | transcript | ENST00000602212.6 | protein_coding | 3/11 | INFO_REALIGN_3_PRIME | chr19 | TogoVar | |||||
P2RX5_chr17_3668227_3701155 | 3685786 | GCCCAGCC others(191): Show |
G | intron_variant | MODIFIER | HG00741.hp2 HG02055.hp1 |
a0001a0002 | a0001c0001a0002c0002 | a0001c0001t0001a0002c0002t0001 | a0001c0001t0001g0305a0002c0002t0001g0028 | 2 | 362 | 0.0055 | -198 | c.981 others(17): Show |
P2RX5 | ENSG00000083454.23 | transcript | ENST00000225328.10 | protein_coding | 9/11 | chr17 | TogoVar | ||||||
PEX5_chr12_7184686_7216459 | 7196910 | ACATATAA others(191): Show |
A | intron_variant | MODIFIER | HG02922.hp1 HG03139.hp1 |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0043 | 2 | 428 | 0.0047 | -198 | c.449 others(17): Show |
PEX5 | ENSG00000139197.11 | transcript | ENST00000675855.1 | protein_coding | 5/15 | INFO_REALIGN_3_PRIME | chr12 | TogoVar | |||||
PITRM1_chr10_3132728_3177782 | 3168425 | ATGGCTGG others(191): Show |
A | intron_variant | MODIFIER | HG02922.hp1 HG03209.hp2 NA18906.hp1 |
a0001 | a0001c0022 | a0001c0022t0001 | a0001c0022t0001g0147a0001c0022t0001g0148a0001c0022t0001g0149 | 3 | 446 | 0.0067 | -198 | c.159 others(17): Show |
PITRM1 | ENSG00000107959.17 | transcript | ENST00000224949.9 | protein_coding | 2/26 | chr10 | TogoVar | ||||||
PLEKHG4B_chr5_87168_194966 | 164939 | CGGGGCGG others(191): Show |
C | intron_variant | MODIFIER | HG03225.hp1 | a0036 | a0036c0075 | a0036c0075t0061 | a0036c0075t0061g0178 | 1 | 210 | 0.0048 | -198 | c.347 others(19): Show |
PLEKHG4B | ENSG00000153404.15 | transcript | ENST00000637938.2 | protein_coding | 13/19 | chr5 | TogoVar | ||||||
PLIN4_chr19_4497192_4523486 | 4511029 | TCCTTTGG others(191): Show |
T | disruptive_inframe_deletion | MODERATE | HG03453.hp2 | a0112 | a0112c0058 | a0112c0058t0004 | a0112c0058t0004g0061 | 1 | 412 | 0.0024 | -198 | c.273 others(9): Show |
p.Thr others(13): Show |
PLIN4 | ENSG00000167676.5 | transcript | ENST00000301286.5 | protein_coding | 5/8 | 3049/6502 | 2733/4116 | 911/1371 | chr19 | TogoVar | ||
PLIN4_chr19_4497192_4523486 | 4511316 | CCTGGACG others(191): Show |
C | conservative_inframe_deletion | MODERATE | NA18963.hp1 NA18993.hp1 NA18997.hp1 others(2): Show |
a0019a0078 | a0019c0015a0078c0088 | a0019c0015t0002a0078c0088t0002 | a0019c0015t0002g0203a0019c0015t0002g0204a0019c0015t0002g0205others(2): Show | 5 | 412 | 0.0121 | -198 | c.244 others(9): Show |
p.Met others(13): Show |
PLIN4 | ENSG00000167676.5 | transcript | ENST00000301286.5 | protein_coding | 5/8 | 2762/6502 | 2446/4116 | 816/1371 | chr19 | TogoVar | ||
PLIN4_chr19_4497192_4523486 | 4511610 | CGGTCTGG others(191): Show |
C | conservative_inframe_deletion | MODERATE | HG01257.hp2 HG01258.hp2 HG01261.hp2 others(1): Show |
a0032a0036 | a0032c0035a0036c0090a0036c0091 | a0032c0035t0001a0036c0090t0001a0036c0091t0001 | a0032c0035t0001g0042a0036c0090t0001g0185a0036c0091t0001g0186 | 4 | 412 | 0.0097 | -198 | c.215 others(9): Show |
p.Ser others(13): Show |
PLIN4 | ENSG00000167676.5 | transcript | ENST00000301286.5 | protein_coding | 5/8 | 2468/6502 | 2152/4116 | 718/1371 | chr19 | TogoVar | ||
PLIN4_chr19_4497192_4523486 | 4512847 | GCAGACAG others(191): Show |
G | disruptive_inframe_deletion | MODERATE | HG01884.hp2 HG02559.hp1 HG02572.hp2 others(11): Show |
a0013a0044a0045others(7): Show | a0013c0026a0013c0079a0013c0148others(9): Show | a0013c0026t0006a0013c0079t0006a0013c0148t0006others(9): Show | a0013c0026t0006g0013a0013c0079t0006g0066a0013c0148t0006g0067others(9): Show | 14 | 412 | 0.0340 | -198 | c.915 others(8): Show |
p.Ser others(13): Show |
PLIN4 | ENSG00000167676.5 | transcript | ENST00000301286.5 | protein_coding | 5/8 | 1231/6502 | 915/4116 | 305/1371 | chr19 | TogoVar | ||
PLIN4_chr19_4497192_4523486 | 4512884 | GTGGTGTC others(191): Show |
G | disruptive_inframe_deletion | MODERATE | HG02071.hp2 | a0055 | a0055c0146 | a0055c0146t0003 | a0055c0146t0003g0262 | 1 | 412 | 0.0024 | -198 | c.878 others(8): Show |
p.Ser others(13): Show |
PLIN4 | ENSG00000167676.5 | transcript | ENST00000301286.5 | protein_coding | 5/8 | 1194/6502 | 878/4116 | 293/1371 | chr19 | TogoVar | ||
POLG_chr15_89311320_89339824 | 89325034 | CAGAGAGT others(191): Show |
C | intron_variant | MODIFIER | NA19006.hp2 NA19068.hp2 |
a0001 | a0001c0001 | a0001c0001t0002 | a0001c0001t0002g0082a0001c0001t0002g0108 | 2 | 398 | 0.0050 | -198 | c.194 others(17): Show |
POLG | ENSG00000140521.18 | transcript | ENST00000268124.11 | protein_coding | 10/22 | chr15 | TogoVar | ||||||
PRKAG2_chr7_151551127_151882115 | 151874102 | ATATGATG others(191): Show |
A | intron_variant | MODIFIER | HG02965.hp1 | a0001 | a0001c0001 | a0001c0001t0010 | a0001c0001t0010g0132 | 1 | 252 | 0.0040 | -198 | c.114 others(17): Show |
PRKAG2 | ENSG00000106617.16 | transcript | ENST00000287878.9 | protein_coding | 1/15 | chr7 | TogoVar | ||||||
PRKCA_chr17_66297613_66815743 | 66798734 | ATGGTGGT others(191): Show |
A | intron_variant | MODIFIER | HG01074.hp1 | a0001 | a0001c0001 | a0001c0001t0007 | a0001c0001t0007g0008 | 1 | 178 | 0.0056 | -198 | c.185 others(19): Show |
PRKCA | ENSG00000154229.12 | transcript | ENST00000413366.8 | protein_coding | 16/16 | INFO_REALIGN_3_PRIME | chr17 | TogoVar | |||||
PTPRT_chr20_42067756_43194906 | 42508940 | AATATAAT others(191): Show |
A | intron_variant | MODIFIER | HG02280.hp2 | a0001 | a0001c0002 | a0001c0002t0002 | a0001c0002t0002g0031 | 1 | 62 | 0.0161 | -198 | c.115 others(21): Show |
PTPRT | ENSG00000196090.14 | transcript | ENST00000373187.6 | protein_coding | 7/30 | chr20 | TogoVar | ||||||
RAP1GAP2_chr17_2791438_3042741 | 3000503 | AATCAGCC others(191): Show |
A | intron_variant | MODIFIER | HG00423.hp2 HG02280.hp2 HG02647.hp2 others(1): Show |
a0001a0002a0003 | a0001c0001a0001c0025a0002c0011others(1): Show | a0001c0001t0025a0001c0025t0058a0002c0011t0095others(1): Show | a0001c0001t0025g0070a0001c0025t0058g0007a0002c0011t0095g0059others(1): Show | 4 | 218 | 0.0184 | -198 | c.120 others(19): Show |
RAP1GAP2 | ENSG00000132359.17 | transcript | ENST00000254695.13 | protein_coding | 14/24 | INFO_REALIGN_3_PRIME | chr17 | TogoVar | |||||
RAP1GAP2_chr17_2791438_3042741 | 3000682 | AGGCTGGT others(191): Show |
A | intron_variant | MODIFIER | HG01081.hp2 HG01515.hp1 HG02258.hp2 |
a0001 | a0001c0001a0001c0004 | a0001c0001t0050a0001c0001t0053a0001c0004t0027 | a0001c0001t0050g0121a0001c0001t0053g0069a0001c0004t0027g0092 | 3 | 218 | 0.0138 | -198 | c.120 others(19): Show |
RAP1GAP2 | ENSG00000132359.17 | transcript | ENST00000254695.13 | protein_coding | 14/24 | INFO_REALIGN_3_PRIME | chr17 | TogoVar | |||||
RAP1GAP2_chr17_2791438_3042741 | 3000701 | TATCAGCC others(191): Show |
T | intron_variant | MODIFIER | HG00733.hp2 HG01496.hp1 HG01978.hp2 others(6): Show |
a0001a0002 | a0001c0001a0001c0002a0001c0007others(1): Show | a0001c0001t0004a0001c0001t0010a0001c0002t0004others(5): Show | a0001c0001t0004g0210a0001c0001t0010g0136a0001c0001t0010g0140others(6): Show | 9 | 218 | 0.0413 | -198 | c.120 others(19): Show |
RAP1GAP2 | ENSG00000132359.17 | transcript | ENST00000254695.13 | protein_coding | 14/24 | INFO_REALIGN_3_PRIME | chr17 | TogoVar | |||||
RAP1GAP2_chr17_2791438_3042741 | 3000935 | ACAGAAGA others(191): Show |
A | intron_variant | MODIFIER | HG02922.hp1 | a0002 | a0002c0020 | a0002c0020t0019 | a0002c0020t0019g0153 | 1 | 218 | 0.0046 | -198 | c.120 others(19): Show |
RAP1GAP2 | ENSG00000132359.17 | transcript | ENST00000254695.13 | protein_coding | 14/24 | INFO_REALIGN_3_PRIME | chr17 | TogoVar | |||||
RAP1GAP2_chr17_2791438_3042741 | 3000984 | CGTGGAGG others(191): Show |
C | intron_variant | MODIFIER | HG02280.hp2 HG03669.hp2 |
a0001a0003 | a0001c0005a0003c0014 | a0001c0005t0011a0003c0014t0025 | a0001c0005t0011g0022a0003c0014t0025g0074 | 2 | 218 | 0.0092 | -198 | c.120 others(19): Show |
RAP1GAP2 | ENSG00000132359.17 | transcript | ENST00000254695.13 | protein_coding | 14/24 | INFO_REALIGN_3_PRIME | chr17 | TogoVar | |||||
RAP1GAP2_chr17_2791438_3042741 | 3001262 | TCCAGGCT others(191): Show |
T | intron_variant | MODIFIER | HG03540.hp1 | a0001 | a0001c0010 | a0001c0010t0017 | a0001c0010t0017g0003 | 1 | 218 | 0.0046 | -198 | c.120 others(19): Show |
RAP1GAP2 | ENSG00000132359.17 | transcript | ENST00000254695.13 | protein_coding | 14/24 | INFO_REALIGN_3_PRIME | chr17 | TogoVar | |||||
RAP1GAP2_chr17_2791438_3042741 | 3001294 | GTATCAGC others(191): Show |
G | intron_variant | MODIFIER | HG03540.hp2 | a0001 | a0001c0001 | a0001c0001t0026 | a0001c0001t0026g0188 | 1 | 218 | 0.0046 | -198 | c.120 others(19): Show |
RAP1GAP2 | ENSG00000132359.17 | transcript | ENST00000254695.13 | protein_coding | 14/24 | chr17 | TogoVar |