regionname | pos | ref | alt | annotation | impact | samples | ahapids | achapids | acthapids | actghapids | ac | an | af | len | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length
|
cds cds pos length
|
aa aa pos length
|
distance | status | chr | external |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
FAM210A_chr18_13658347_13731558 | 13674895 | CTTCTTTA others(177): Show |
C | intron_variant | MODIFIER | HG01891.hp1 HG02895.hp2 HG02922.hp1 others(1): Show |
a0001 | a0001c0001 | a0001c0001t0006a0001c0001t0009a0001c0001t0014 | a0001c0001t0006g0260a0001c0001t0009g0045a0001c0001t0014g0006 | 4 | 326 | 0.0123 | -184 | c.474 others(17): Show |
FAM210A | ENSG00000177150.13 | transcript | ENST00000651643.1 | protein_coding | 2/3 | chr18 | TogoVar | ||||||
GAL3ST2_chr2_241771822_241809287 | 241806140 | GACCTCCG others(177): Show |
G | downstream_gene_variant | MODIFIER | HG00558.hp2 | a0001 | a0001c0001 | a0001c0001t0002 | a0001c0001t0002g0024 | 1 | 314 | 0.0032 | -184 | c.*19 others(11): Show |
GAL3ST2 | ENSG00000154252.12 | transcript | ENST00000192314.7 | protein_coding | 1854 | chr2 | TogoVar | ||||||
GAL3ST2_chr2_241771822_241809287 | 241806596 | TCCGCAGG others(177): Show |
T | downstream_gene_variant | MODIFIER | HG02572.hp2 | a0001 | a0001c0001 | a0001c0001t0002 | a0001c0001t0002g0066 | 1 | 314 | 0.0032 | -184 | c.*24 others(11): Show |
GAL3ST2 | ENSG00000154252.12 | transcript | ENST00000192314.7 | protein_coding | 2310 | chr2 | TogoVar | ||||||
GAS6_chr13_113815549_113869076 | 113828919 | ACCACCTG others(177): Show |
A | intron_variant | MODIFIER | NA18522.hp1 NA18990.hp1 NA19088.hp1 |
a0001 | a0001c0003a0001c0008 | a0001c0003t0001a0001c0008t0001 | a0001c0003t0001g0062a0001c0003t0001g0123a0001c0008t0001g0079 | 3 | 143 | 0.0210 | -184 | c.114 others(17): Show |
GAS6 | ENSG00000183087.15 | transcript | ENST00000327773.7 | protein_coding | 10/14 | chr13 | TogoVar | ||||||
GCNT3_chr15_59606783_59627723 | 59610988 | CCCCTCCC others(177): Show |
C | upstream_gene_variant | MODIFIER | HG01943.hp1 NA18946.hp2 NA18954.hp2 others(5): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0013a0001c0002t0008a0001c0002t0009others(3): Show | a0001c0001t0013g0002a0001c0002t0008g0002a0001c0002t0009g0002others(4): Show | 8 | 428 | 0.0187 | -184 | c.-12 others(11): Show |
GCNT3 | ENSG00000140297.13 | transcript | ENST00000396065.3 | protein_coding | 794 | chr15 | TogoVar | ||||||
GEN1_chr2_17749138_17793946 | 17778248 | GTATACAC others(177): Show |
G | intron_variant | MODIFIER | HG02486.hp1 | a0003 | a0003c0003 | a0003c0003t0047 | a0003c0003t0047g0054 | 1 | 318 | 0.0031 | -184 | c.126 others(17): Show |
GEN1 | ENSG00000178295.15 | transcript | ENST00000381254.7 | protein_coding | 12/13 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | |||||
GFOD1_chr6_13352830_13492600 | 13434165 | GCAGGGCA others(177): Show |
G | intron_variant | MODIFIER | HG01891.hp1 | a0001 | a0001c0001 | a0001c0001t0033 | a0001c0001t0033g0002 | 1 | 230 | 0.0044 | -184 | c.253 others(19): Show |
GFOD1 | ENSG00000145990.11 | transcript | ENST00000379287.4 | protein_coding | 1/1 | chr6 | TogoVar | ||||||
GLYATL1B_chr11_59081307_59099786 | 59090492 | CGTGATTT others(177): Show |
C | intron_variant | MODIFIER | HG00609.hp1 NA18982.hp2 |
a0006 | a0006c0006 | a0006c0006t0000 | a0006c0006t0000g0027 | 2 | 436 | 0.0046 | -184 | c.187 others(17): Show |
GLYATL1B | ENSG00000255151.2 | transcript | ENST00000527482.2 | protein_coding | 2/4 | chr11 | TogoVar | ||||||
GPM6A_chr4_175627937_175817264 | 175637538 | CAATATAT others(177): Show |
C | intron_variant | MODIFIER | NA18955.hp2 NA18974.hp2 |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0254a0001c0001t0001g0255 | 2 | 270 | 0.0074 | -184 | c.684 others(17): Show |
GPM6A | ENSG00000150625.17 | transcript | ENST00000393658.7 | protein_coding | 6/6 | chr4 | TogoVar | ||||||
HDAC4_chr2_239043168_239406020 | 239232656 | CCCCTCAC others(177): Show |
C | intron_variant | MODIFIER | HG00642.hp1 HG01099.hp1 HG01168.hp1 others(1): Show |
a0001a0004 | a0001c0001a0001c0002a0004c0014 | a0001c0001t0005a0001c0002t0009a0004c0014t0002 | a0001c0001t0005g0099a0001c0002t0009g0100a0004c0014t0002g0101others(1): Show | 4 | 242 | 0.0165 | -184 | c.94+ others(15): Show |
HDAC4 | ENSG00000068024.18 | transcript | ENST00000543185.6 | protein_coding | 3/26 | chr2 | TogoVar | ||||||
HSD17B14_chr19_48808018_48841491 | 48834486 | GCTGAGGT others(177): Show |
G | intron_variant | MODIFIER | HG00639.hp1 | a0002 | a0002c0002 | a0002c0002t0001 | a0002c0002t0001g0319 | 1 | 394 | 0.0025 | -184 | c.128 others(15): Show |
HSD17B14 | ENSG00000087076.9 | transcript | ENST00000263278.9 | protein_coding | 2/8 | chr19 | TogoVar | ||||||
HSD17B14_chr19_48808018_48841491 | 48835081 | AGCCTGGA others(177): Show |
A | intron_variant | MODIFIER | HG03239.hp2 HG03491.hp2 homoSapiens_chm13v2.hp1 |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0232a0001c0001t0001g0233a0001c0001t0001g0234 | 3 | 394 | 0.0076 | -184 | c.127 others(15): Show |
HSD17B14 | ENSG00000087076.9 | transcript | ENST00000263278.9 | protein_coding | 2/8 | chr19 | TogoVar | ||||||
IL1A_chr2_112768925_112789493 | 112776428 | TCCCAAAA others(177): Show |
T | intron_variant | MODIFIER | HG00099.hp1 HG00323.hp1 HG00423.hp1 others(181): Show |
a0001a0002a0003others(3): Show | a0001c0001a0001c0003a0001c0008others(5): Show | a0001c0001t0003a0001c0001t0004a0001c0001t0005others(9): Show | a0001c0001t0003g0003a0001c0001t0003g0005a0001c0001t0003g0018others(48): Show | 184 | 358 | 0.5140 | -184 | c.616 others(17): Show |
IL1A | ENSG00000115008.6 | transcript | ENST00000263339.4 | protein_coding | 6/6 | chr2 | TogoVar | ||||||
IL1R2_chr2_101986960_102033544 | 102003002 | ATGTCTGT others(177): Show |
A | intron_variant | MODIFIER | HG00140.hp2 HG00280.hp1 HG00280.hp2 others(83): Show |
a0001a0005 | a0001c0001a0001c0003a0001c0004others(2): Show | a0001c0001t0001a0001c0003t0001a0001c0004t0001others(2): Show | a0001c0001t0001g0001a0001c0001t0001g0003a0001c0001t0001g0005others(69): Show | 86 | 426 | 0.2019 | -184 | c.-61 others(17): Show |
IL1R2 | ENSG00000115590.14 | transcript | ENST00000332549.8 | protein_coding | 1/8 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | |||||
KCNQ3_chr8_132115861_132486095 | 132164243 | ATTGCCCA others(177): Show |
A | intron_variant | MODIFIER | HG01884.hp2 HG02055.hp2 |
a0001 | a0001c0001 | a0001c0001t0056a0001c0001t0058 | a0001c0001t0056g0087a0001c0001t0058g0065 | 2 | 176 | 0.0114 | -184 | c.123 others(17): Show |
KCNQ3 | ENSG00000184156.18 | transcript | ENST00000388996.10 | protein_coding | 8/14 | chr8 | TogoVar | ||||||
KNDC1_chr10_133155219_133231412 | 133223499 | GTGTGCAT others(177): Show |
G | intron_variant | MODIFIER | HG02630.hp2 NA19240.hp1 |
a0012 | a0012c0018a0012c0045 | a0012c0018t0006a0012c0045t0006 | a0012c0018t0006g0267a0012c0045t0006g0244 | 2 | 332 | 0.0060 | -184 | c.501 others(18): Show |
KNDC1 | ENSG00000171798.19 | transcript | ENST00000304613.8 | protein_coding | 29/29 | INFO_REALIGN_3_PRIME | chr10 | TogoVar | |||||
LMF1_chr16_848634_975984 | 858063 | TCGGGATG others(177): Show |
T | intron_variant | MODIFIER | HG03453.hp1 | a0001 | a0001c0026 | a0001c0026t0001 | a0001c0026t0001g0234 | 1 | 294 | 0.0034 | -184 | c.153 others(19): Show |
LMF1 | ENSG00000103227.19 | transcript | ENST00000262301.16 | protein_coding | 10/10 | chr16 | TogoVar | ||||||
LMF1_chr16_848634_975984 | 904196 | TGGTGACC others(177): Show |
T | intron_variant | MODIFIER | HG00741.hp2 HG01071.hp1 HG01258.hp2 others(4): Show |
a0001a0002a0008 | a0001c0010a0002c0035a0008c0036 | a0001c0010t0001a0002c0035t0001a0008c0036t0003 | a0001c0010t0001g0115a0001c0010t0001g0271a0001c0010t0001g0272others(4): Show | 7 | 294 | 0.0238 | -184 | c.663 others(17): Show |
LMF1 | ENSG00000103227.19 | transcript | ENST00000262301.16 | protein_coding | 4/10 | chr16 | TogoVar | ||||||
LMF1_chr16_848634_975984 | 960966 | CACAGACT others(177): Show |
C | intron_variant | MODIFIER | NA18966.hp1 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0143 | 1 | 294 | 0.0034 | -184 | c.194 others(17): Show |
LMF1 | ENSG00000103227.19 | transcript | ENST00000262301.16 | protein_coding | 1/10 | chr16 | TogoVar | ||||||
LRRC24_chr8_144517388_144532033 | 144531294 | AAGGGCAC others(177): Show |
A | upstream_gene_variant | MODIFIER | HG03654.hp1 | a0002 | a0002c0002 | a0002c0002t0001 | a0002c0002t0001g0034 | 1 | 398 | 0.0025 | -184 | c.-45 others(11): Show |
LRRC24 | ENSG00000254402.7 | transcript | ENST00000529415.7 | protein_coding | 4262 | chr8 | TogoVar | ||||||
MAP4K3_chr2_39244266_39442285 | 39327703 | AAAATTTA others(177): Show |
A | intron_variant | MODIFIER | HG02615.hp1 | a0002 | a0002c0010 | a0002c0010t0005 | a0002c0010t0005g0017 | 1 | 232 | 0.0043 | -184 | c.531 others(17): Show |
MAP4K3 | ENSG00000011566.15 | transcript | ENST00000263881.8 | protein_coding | 8/33 | chr2 | TogoVar | ||||||
MBD3L5_chr19_7025578_7038011 | 7035766 | ATATATAT others(177): Show |
A | downstream_gene_variant | MODIFIER | HG00323.hp2 | a0001 | a0001c0001 | a0001c0001t0002 | a0001c0001t0002g0009 | 1 | 249 | 0.0040 | -184 | c.*28 others(11): Show |
MBD3L5 | ENSG00000237247.6 | transcript | ENST00000329753.5 | protein_coding | 2756 | chr19 | TogoVar | ||||||
MUC4_chr3_195741771_195816929 | 195767681 | TCACTGGC others(177): Show |
T | intron_variant | MODIFIER | HG01884.hp1 HG02976.hp1 |
a0070a0073 | a0070c0174a0073c0176 | a0070c0174t0002a0073c0176t0005 | a0070c0174t0002g0211a0073c0176t0005g0228 | 2 | 249 | 0.0080 | -184 | c.135 others(20): Show |
MUC4 | ENSG00000145113.22 | transcript | ENST00000463781.8 | protein_coding | 7/24 | chr3 | TogoVar | ||||||
NEO1_chr15_73047463_73310205 | 73191318 | TGTAACTT others(177): Show |
T | intron_variant | MODIFIER | HG00408.hp1 HG00423.hp1 HG00673.hp2 others(99): Show |
a0001a0003 | a0001c0002a0001c0004a0001c0018others(3): Show | a0001c0002t0001a0001c0002t0005a0001c0002t0008others(12): Show | a0001c0002t0001g0004a0001c0002t0001g0005a0001c0002t0001g0006others(99): Show | 102 | 324 | 0.3148 | -184 | c.129 others(21): Show |
NEO1 | ENSG00000067141.17 | transcript | ENST00000261908.11 | protein_coding | 7/28 | INFO_REALIGN_3_PRIME | chr15 | TogoVar | |||||
NEU4_chr2_241804193_241822413 | 241806140 | GACCTCCG others(177): Show |
G | upstream_gene_variant | MODIFIER | HG00558.hp1 | a0002 | a0002c0003 | a0002c0003t0002 | a0002c0003t0002g0126 | 1 | 319 | 0.0031 | -184 | c.-31 others(11): Show |
NEU4 | ENSG00000204099.12 | transcript | ENST00000407683.6 | protein_coding | 3052 | chr2 | TogoVar | ||||||
NEU4_chr2_241804193_241822413 | 241806578 | CCCCTCAG others(177): Show |
C | upstream_gene_variant | MODIFIER | HG01975.hp1 | a0001 | a0001c0002 | a0001c0002t0001 | a0001c0002t0001g0004 | 1 | 319 | 0.0031 | -184 | c.-26 others(11): Show |
NEU4 | ENSG00000204099.12 | transcript | ENST00000407683.6 | protein_coding | 2614 | chr2 | TogoVar | ||||||
NFATC1_chr18_79390930_79534323 | 79521031 | GTGTATGG others(177): Show |
G | intron_variant | MODIFIER | HG02148.hp2 | a0003 | a0003c0007 | a0003c0007t0008 | a0003c0007t0008g0032 | 1 | 322 | 0.0031 | -184 | c.278 others(19): Show |
NFATC1 | ENSG00000131196.18 | transcript | ENST00000427363.7 | protein_coding | 9/9 | INFO_REALIGN_3_PRIME | chr18 | TogoVar | |||||
NFATC1_chr18_79390930_79534323 | 79521103 | GTGTGTGT others(177): Show |
G | intron_variant | MODIFIER | HG01975.hp2 | a0001 | a0001c0027 | a0001c0027t0008 | a0001c0027t0008g0013 | 1 | 322 | 0.0031 | -184 | c.278 others(19): Show |
NFATC1 | ENSG00000131196.18 | transcript | ENST00000427363.7 | protein_coding | 9/9 | INFO_REALIGN_3_PRIME | chr18 | TogoVar | |||||
NMRK2_chr19_3928069_3947416 | 3937327 | GGGGTCCG others(177): Show |
G | intron_variant | MODIFIER | HG01106.hp1 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0089 | 1 | 404 | 0.0025 | -184 | c.166 others(15): Show |
NMRK2 | ENSG00000077009.14 | transcript | ENST00000168977.7 | protein_coding | 4/7 | INFO_REALIGN_3_PRIME | chr19 | TogoVar | |||||
PARL_chr3_183824271_183889880 | 183881694 | GCTGCAGT others(177): Show |
G | intron_variant | MODIFIER | NA19043.hp2 | a0005 | a0005c0005 | a0005c0005t0001 | a0005c0005t0001g0019 | 1 | 358 | 0.0028 | -184 | c.125 others(17): Show |
PARL | ENSG00000175193.14 | transcript | ENST00000317096.9 | protein_coding | 1/9 | chr3 | TogoVar | ||||||
PBX3_chr9_125742373_125972377 | 125780627 | TGGCCGGG others(177): Show |
T | intron_variant | MODIFIER | NA19007.hp1 | a0001 | a0001c0001 | a0001c0001t0002 | a0001c0001t0002g0094 | 1 | 294 | 0.0034 | -184 | c.274 others(19): Show |
PBX3 | ENSG00000167081.18 | transcript | ENST00000373489.10 | protein_coding | 2/8 | INFO_REALIGN_3_PRIME | chr9 | TogoVar | |||||
PGAM5_chr12_132705842_132727734 | 132718358 | TGGTGTCC others(177): Show |
T | intron_variant | MODIFIER | NA19240.hp1 | a0001 | a0001c0008 | a0001c0008t0007 | a0001c0008t0007g0158 | 1 | 394 | 0.0025 | -184 | c.719 others(15): Show |
PGAM5 | ENSG00000247077.8 | transcript | ENST00000498926.7 | protein_coding | 5/5 | INFO_REALIGN_3_PRIME | chr12 | TogoVar | |||||
PLAA_chr9_26898372_26952242 | 26933225 | GCCACTGC others(177): Show |
G | intron_variant | MODIFIER | HG03654.hp2 | a0001 | a0001c0001 | a0001c0001t0002 | a0001c0001t0002g0072 | 1 | 374 | 0.0027 | -184 | c.343 others(17): Show |
PLAA | ENSG00000137055.15 | transcript | ENST00000397292.8 | protein_coding | 2/13 | chr9 | TogoVar | ||||||
PLEKHA4_chr19_48832097_48873617 | 48834486 | GCTGAGGT others(177): Show |
G | downstream_gene_variant | MODIFIER | HG00639.hp2 | a0002 | a0002c0002 | a0002c0002t0002 | a0002c0002t0002g0097 | 1 | 300 | 0.0033 | -184 | c.*26 others(11): Show |
PLEKHA4 | ENSG00000105559.13 | transcript | ENST00000263265.11 | protein_coding | 2610 | chr19 | TogoVar | ||||||
PLEKHA4_chr19_48832097_48873617 | 48835081 | AGCCTGGA others(177): Show |
A | downstream_gene_variant | MODIFIER | HG03491.hp2 homoSapiens_chm13v2.hp1 |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0011 | a0001c0001t0001g0205a0001c0001t0011g0104 | 2 | 300 | 0.0067 | -184 | c.*20 others(11): Show |
PLEKHA4 | ENSG00000105559.13 | transcript | ENST00000263265.11 | protein_coding | 2015 | chr19 | TogoVar | ||||||
POLG_chr15_89311320_89339824 | 89325087 | AGTGAGTG others(177): Show |
A | intron_variant | MODIFIER | HG00140.hp1 HG00140.hp2 HG00280.hp1 others(107): Show |
a0001a0002a0003others(6): Show | a0001c0001a0001c0017a0002c0002others(8): Show | a0001c0001t0002a0001c0017t0002a0002c0002t0002others(8): Show | a0001c0001t0002g0001a0001c0001t0002g0004a0001c0001t0002g0007others(49): Show | 110 | 398 | 0.2764 | -184 | c.194 others(17): Show |
POLG | ENSG00000140521.18 | transcript | ENST00000268124.11 | protein_coding | 10/22 | chr15 | TogoVar | ||||||
PPP1R9A_chr7_94902594_95301400 | 95072684 | TATATATT others(177): Show |
T | intron_variant | MODIFIER | HG03225.hp1 | a0004 | a0004c0005 | a0004c0005t0003 | a0004c0005t0003g0153 | 1 | 290 | 0.0035 | -184 | c.139 others(21): Show |
PPP1R9A | ENSG00000158528.12 | transcript | ENST00000433360.6 | protein_coding | 2/19 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | |||||
RBM34_chr1_235126183_235166250 | 235135084 | ACCCAGGC others(177): Show |
A | intron_variant | MODIFIER | HG00642.hp2 HG00733.hp2 HG00738.hp2 others(35): Show |
a0001 | a0001c0002a0001c0004a0001c0011 | a0001c0002t0002a0001c0004t0002a0001c0011t0002 | a0001c0002t0002g0037a0001c0002t0002g0286a0001c0002t0002g0287others(34): Show | 38 | 388 | 0.0979 | -184 | c.100 others(17): Show |
RBM34 | ENSG00000188739.15 | transcript | ENST00000408888.8 | protein_coding | 10/10 | chr1 | TogoVar | ||||||
RHOF_chr12_121772754_121798688 | 121785466 | GCCCAGGC others(177): Show |
G | intron_variant | MODIFIER | HG02738.hp1 | a0001 | a0001c0001 | a0001c0001t0043 | a0001c0001t0043g0127 | 1 | 386 | 0.0026 | -184 | c.227 others(17): Show |
RHOF | ENSG00000139725.8 | transcript | ENST00000267205.7 | protein_coding | 2/4 | chr12 | TogoVar | ||||||
RNF126_chr19_642526_668214 | 650009 | GCCCAGGC others(177): Show |
G | intron_variant | MODIFIER | HG00639.hp2 HG00735.hp1 HG01109.hp1 others(21): Show |
a0001 | a0001c0001a0001c0002a0001c0008 | a0001c0001t0001a0001c0001t0003a0001c0001t0008others(3): Show | a0001c0001t0001g0084a0001c0001t0003g0054a0001c0001t0003g0055others(20): Show | 24 | 434 | 0.0553 | -184 | c.506 others(14): Show |
RNF126 | ENSG00000070423.18 | transcript | ENST00000292363.10 | protein_coding | 5/8 | chr19 | TogoVar | ||||||
RNF213_chr17_80255852_80403794 | 80315585 | GTGGTGGT others(177): Show |
G | intron_variant | MODIFIER | HG00558.hp1 HG00597.hp1 HG00609.hp2 others(60): Show |
a0001a0002a0003others(30): Show | a0001c0001a0001c0004a0001c0006others(41): Show | a0001c0001t0029a0001c0004t0007a0001c0004t0011others(51): Show | a0001c0001t0029g0079a0001c0004t0007g0047a0001c0004t0007g0268others(60): Show | 63 | 292 | 0.2158 | -184 | c.281 others(19): Show |
RNF213 | ENSG00000173821.20 | transcript | ENST00000582970.6 | protein_coding | 15/67 | INFO_REALIGN_3_PRIME | chr17 | TogoVar | |||||
SCNN1D_chr1_1275436_1297025 | 1288273 | TCCCCCGA others(177): Show |
T | intron_variant | MODIFIER | HG03225.hp1 | a0001 | a0001c0001 | a0001c0001t0011 | a0001c0001t0011g0268 | 1 | 290 | 0.0035 | -184 | c.166 others(17): Show |
SCNN1D | ENSG00000162572.21 | transcript | ENST00000379116.10 | protein_coding | 12/17 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | |||||
SDK1_chr7_3296252_4274000 | 4194222 | ACACGTAT others(177): Show |
A | intron_variant | MODIFIER | HG01243.hp2 HG02976.hp1 HG03041.hp1 others(1): Show |
a0001a0021a0034 | a0001c0037a0001c0071a0021c0045others(1): Show | a0001c0037t0002a0001c0071t0057a0021c0045t0015others(1): Show | a0001c0037t0002g0077a0001c0071t0057g0031a0021c0045t0015g0046others(1): Show | 4 | 116 | 0.0345 | -184 | c.509 others(21): Show |
SDK1 | ENSG00000146555.20 | transcript | ENST00000404826.7 | protein_coding | 35/44 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | |||||
SHTN1_chr10_116876477_117010187 | 116980866 | ATGAGATT others(177): Show |
A | intron_variant | MODIFIER | HG02132.hp1 | a0001 | a0001c0001 | a0001c0001t0005 | a0001c0001t0005g0204 | 1 | 292 | 0.0034 | -184 | c.59- others(15): Show |
SHTN1 | ENSG00000187164.20 | transcript | ENST00000355371.9 | protein_coding | 1/16 | chr10 | TogoVar | ||||||
SLC30A9_chr4_41985530_42095461 | 42021918 | TTTTTTTT others(177): Show |
T | intron_variant | MODIFIER | HG00140.hp1 HG00140.hp2 HG00735.hp1 others(59): Show |
a0001a0002a0005 | a0001c0004a0002c0002a0002c0009others(2): Show | a0001c0004t0005a0001c0004t0013a0001c0004t0015others(15): Show | a0001c0004t0005g0114a0001c0004t0005g0115a0001c0004t0005g0116others(59): Show | 62 | 164 | 0.3781 | -184 | c.435 others(15): Show |
SLC30A9 | ENSG00000014824.14 | transcript | ENST00000264451.12 | protein_coding | 4/17 | INFO_REALIGN_3_PRIME | chr4 | TogoVar | |||||
SLC9A3_chr5_465456_529449 | 467399 | GGGCGCCC others(177): Show |
G | downstream_gene_variant | MODIFIER | HG01517.hp2 HG04115.hp2 NA20805.hp1 others(1): Show |
a0001 | a0001c0003a0001c0009a0001c0019 | a0001c0003t0009a0001c0009t0009a0001c0019t0009 | a0001c0003t0009g0007a0001c0009t0009g0081a0001c0009t0009g0090others(1): Show | 4 | 218 | 0.0184 | -184 | c.*57 others(11): Show |
SLC9A3 | ENSG00000066230.12 | transcript | ENST00000264938.8 | protein_coding | 3056 | chr5 | TogoVar | ||||||
SLC9A3_chr5_465456_529449 | 467491 | GGGTGCCT others(177): Show |
G | downstream_gene_variant | MODIFIER | HG00099.hp1 NA18943.hp2 NA19074.hp2 |
a0002 | a0002c0004 | a0002c0004t0006a0002c0004t0015 | a0002c0004t0006g0173a0002c0004t0006g0209a0002c0004t0015g0037 | 3 | 218 | 0.0138 | -184 | c.*57 others(11): Show |
SLC9A3 | ENSG00000066230.12 | transcript | ENST00000264938.8 | protein_coding | 2964 | chr5 | TogoVar | ||||||
SLC9A3_chr5_465456_529449 | 467696 | CTGTCTGA others(177): Show |
C | downstream_gene_variant | MODIFIER | HG01361.hp2 HG02451.hp1 HG02559.hp2 |
a0002 | a0002c0004a0002c0005 | a0002c0004t0015a0002c0004t0025a0002c0005t0006 | a0002c0004t0015g0133a0002c0004t0025g0143a0002c0005t0006g0214 | 3 | 218 | 0.0138 | -184 | c.*54 others(11): Show |
SLC9A3 | ENSG00000066230.12 | transcript | ENST00000264938.8 | protein_coding | 2759 | chr5 | TogoVar | ||||||
SLC9A3_chr5_465456_529449 | 468020 | GTCTGACA others(177): Show |
G | downstream_gene_variant | MODIFIER | HG00735.hp2 HG01071.hp2 HG01074.hp1 others(2): Show |
a0001 | a0001c0003a0001c0030 | a0001c0003t0008a0001c0030t0008 | a0001c0003t0008g0038a0001c0003t0008g0039a0001c0003t0008g0112others(2): Show | 5 | 218 | 0.0229 | -184 | c.*51 others(11): Show |
SLC9A3 | ENSG00000066230.12 | transcript | ENST00000264938.8 | protein_coding | 2435 | chr5 | TogoVar | ||||||
SPAG16_chr2_213279464_214415501 | 213980268 | TTCTCTAT others(177): Show |
T | intron_variant | MODIFIER | HG00735.hp2 HG01256.hp2 HG01361.hp2 others(6): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002 | a0001c0001t0001g0015a0001c0001t0001g0027a0001c0001t0001g0030others(6): Show | 9 | 86 | 0.1047 | -184 | c.140 others(21): Show |
SPAG16 | ENSG00000144451.20 | transcript | ENST00000331683.10 | protein_coding | 12/15 | INFO_REALIGN_3_PRIME | chr2 | TogoVar |