regionname | pos | ref | alt | annotation | impact | samples | ahapids | achapids | acthapids | actghapids | ac | an | af | len | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length
|
cds cds pos length
|
aa aa pos length
|
distance | status | chr | external |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
GALNT9_chr12_132191372_132334589 | 132305257 | ACACACCC others(153): Show |
A | intron_variant | MODIFIER | HG00423.hp2 HG01070.hp1 HG01167.hp2 others(29): Show |
a0001a0004 | a0001c0001a0001c0002a0001c0003others(8): Show | a0001c0001t0001a0001c0002t0001a0001c0002t0013others(9): Show | a0001c0001t0001g0019a0001c0001t0001g0023a0001c0001t0001g0035others(29): Show | 32 | 183 | 0.1749 | -160 | c.239 others(19): Show |
GALNT9 | ENSG00000182870.13 | transcript | ENST00000328957.13 | protein_coding | 1/10 | chr12 | TogoVar | ||||||
GALNT9_chr12_132191372_132334589 | 132305449 | ACACAGCC others(153): Show |
A | intron_variant | MODIFIER | NA21309.hp2 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0094 | 1 | 183 | 0.0055 | -160 | c.239 others(19): Show |
GALNT9 | ENSG00000182870.13 | transcript | ENST00000328957.13 | protein_coding | 1/10 | chr12 | TogoVar | ||||||
GCFC2_chr2_75657705_75715915 | 75712132 | ACACCAAT others(153): Show |
A | upstream_gene_variant | MODIFIER | HG00323.hp2 HG00408.hp2 HG00438.hp1 others(54): Show |
a0002 | a0002c0002 | a0002c0002t0002a0002c0002t0003a0002c0002t0014others(3): Show | a0002c0002t0002g0002a0002c0002t0002g0006a0002c0002t0002g0032others(39): Show | 57 | 404 | 0.1411 | -160 | c.-14 others(11): Show |
GCFC2 | ENSG00000005436.14 | transcript | ENST00000321027.8 | protein_coding | 1218 | chr2 | TogoVar | ||||||
GET4_chr7_871554_901436 | 889773 | TAGGACGG others(153): Show |
T | intron_variant | MODIFIER | HG00099.hp1 HG00323.hp2 HG00408.hp2 others(137): Show |
a0001a0002 | a0001c0001a0001c0012a0001c0013others(1): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0004others(16): Show | a0001c0001t0001g0001a0001c0001t0001g0004a0001c0001t0001g0009others(97): Show | 140 | 384 | 0.3646 | -160 | c.467 others(16): Show |
GET4 | ENSG00000239857.7 | transcript | ENST00000265857.8 | protein_coding | 4/8 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | |||||
GET4_chr7_871554_901436 | 890239 | CGAGCGGG others(153): Show |
C | intron_variant | MODIFIER | HG01106.hp1 HG01175.hp2 HG01433.hp2 others(2): Show |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0019a0001c0001t0001g0215a0001c0001t0001g0229 | 5 | 384 | 0.0130 | -160 | c.467 others(15): Show |
GET4 | ENSG00000239857.7 | transcript | ENST00000265857.8 | protein_coding | 4/8 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | |||||
GLB1L3_chr11_134271379_134324564 | 134308203 | TACCACCA others(153): Show |
T | intron_variant | MODIFIER | HG02630.hp1 HG02647.hp1 |
a0001a0003 | a0001c0001a0003c0007 | a0001c0001t0004a0003c0007t0001 | a0001c0001t0004g0111a0003c0007t0001g0122 | 2 | 422 | 0.0047 | -160 | c.961 others(17): Show |
GLB1L3 | ENSG00000166105.16 | transcript | ENST00000431683.7 | protein_coding | 10/19 | INFO_REALIGN_3_PRIME | chr11 | TogoVar | |||||
GLIS1_chr1_53501239_53744164 | 53502312 | AGGAAGGA others(153): Show |
A | downstream_gene_variant | MODIFIER | HG04228.hp2 NA20300.hp2 |
a0001a0009 | a0001c0001a0009c0011 | a0001c0001t0002a0009c0011t0002 | a0001c0001t0002g0116a0009c0011t0002g0135 | 2 | 236 | 0.0085 | -160 | c.*41 others(11): Show |
GLIS1 | ENSG00000174332.6 | transcript | ENST00000628545.2 | protein_coding | 3926 | chr1 | TogoVar | ||||||
GLIS1_chr1_53501239_53744164 | 53502316 | AGGAGAGG others(153): Show |
A | downstream_gene_variant | MODIFIER | HG00099.hp1 HG00438.hp1 HG00438.hp2 others(83): Show |
a0001a0002a0003others(7): Show | a0001c0001a0001c0005a0002c0002others(14): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0017others(20): Show | a0001c0001t0001g0067a0001c0001t0001g0080a0001c0001t0001g0081others(83): Show | 86 | 236 | 0.3644 | -160 | c.*41 others(11): Show |
GLIS1 | ENSG00000174332.6 | transcript | ENST00000628545.2 | protein_coding | 3922 | chr1 | TogoVar | ||||||
GMDS_chr6_1618806_2250605 | 2202056 | CGTTAGCA others(153): Show |
C | intron_variant | MODIFIER | HG02698.hp1 | a0001 | a0001c0002 | a0001c0002t0001 | a0001c0002t0001g0156 | 1 | 166 | 0.0060 | -160 | c.102 others(19): Show |
GMDS | ENSG00000112699.11 | transcript | ENST00000380815.5 | protein_coding | 1/10 | chr6 | TogoVar | ||||||
GOLGA3_chr12_132763914_132833869 | 132793078 | AGACCCAC others(153): Show |
A | intron_variant | MODIFIER | HG02155.hp2 HG02738.hp1 NA18956.hp1 others(5): Show |
a0001 | a0001c0003a0001c0023 | a0001c0003t0004a0001c0003t0011a0001c0023t0004 | a0001c0003t0004g0144a0001c0003t0004g0145a0001c0003t0004g0158others(5): Show | 8 | 308 | 0.0260 | -160 | c.247 others(19): Show |
GOLGA3 | ENSG00000090615.16 | transcript | ENST00000450791.8 | protein_coding | 11/23 | chr12 | TogoVar | ||||||
GOLGA3_chr12_132763914_132833869 | 132793238 | TGACCCAC others(153): Show |
T | intron_variant | MODIFIER | HG02486.hp2 HG02615.hp1 HG03209.hp2 |
a0005 | a0005c0006 | a0005c0006t0043a0005c0006t0044a0005c0006t0081 | a0005c0006t0043g0004a0005c0006t0044g0005a0005c0006t0081g0308 | 3 | 308 | 0.0097 | -160 | c.247 others(19): Show |
GOLGA3 | ENSG00000090615.16 | transcript | ENST00000450791.8 | protein_coding | 11/23 | chr12 | TogoVar | ||||||
GOLGA3_chr12_132763914_132833869 | 132793577 | CGCACTCG others(153): Show |
C | intron_variant | MODIFIER | HG02896.hp2 HG02897.hp2 |
a0002 | a0002c0002 | a0002c0002t0002 | a0002c0002t0002g0168a0002c0002t0002g0174 | 2 | 308 | 0.0065 | -160 | c.246 others(19): Show |
GOLGA3 | ENSG00000090615.16 | transcript | ENST00000450791.8 | protein_coding | 11/23 | chr12 | TogoVar | ||||||
GP1BB_chr22_19718539_19729771 | 19726426 | GCTGTGGG others(153): Show |
G | downstream_gene_variant | MODIFIER | HG01106.hp2 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0001 | 1 | 410 | 0.0024 | -160 | c.*19 others(11): Show |
GP1BB | ENSG00000203618.6 | transcript | ENST00000366425.4 | protein_coding | 1656 | chr22 | TogoVar | ||||||
GPC5_chr13_91393621_92872237 | 92297302 | TACCAATC others(153): Show |
T | intron_variant | MODIFIER | HG01261.hp2 HG02896.hp1 HG02897.hp1 others(6): Show |
a0001a0002a0003 | a0001c0001a0001c0004a0002c0002others(1): Show | a0001c0001t0001a0001c0001t0002a0001c0004t0001others(2): Show | a0001c0001t0001g0005a0001c0001t0001g0013a0001c0001t0001g0021others(6): Show | 9 | 42 | 0.2143 | -160 | c.156 others(23): Show |
GPC5 | ENSG00000179399.16 | transcript | ENST00000377067.9 | protein_coding | 7/7 | INFO_REALIGN_3_PRIME | chr13 | TogoVar | |||||
GPC5_chr13_91393621_92872237 | 92297381 | GTGCACCA others(153): Show |
G | intron_variant | MODIFIER | HG02897.hp2 HG03471.hp2 |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0007a0001c0001t0001g0020 | 2 | 42 | 0.0476 | -160 | c.156 others(23): Show |
GPC5 | ENSG00000179399.16 | transcript | ENST00000377067.9 | protein_coding | 7/7 | INFO_REALIGN_3_PRIME | chr13 | TogoVar | |||||
GRP_chr18_59215158_59235771 | 59234292 | AACATATT others(153): Show |
A | downstream_gene_variant | MODIFIER | HG03669.hp2 HG03710.hp1 HG03710.hp2 |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0003a0001c0001t0001g0005 | 3 | 408 | 0.0074 | -160 | c.*38 others(11): Show |
GRP | ENSG00000134443.10 | transcript | ENST00000256857.7 | protein_coding | 3522 | chr18 | TogoVar | ||||||
GRP_chr18_59215158_59235771 | 59234327 | AACATATT others(153): Show |
A | downstream_gene_variant | MODIFIER | HG00558.hp1 HG01516.hp2 HG02083.hp1 others(8): Show |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0001a0001c0001t0001g0002a0001c0001t0001g0003others(3): Show | 11 | 408 | 0.0270 | -160 | c.*38 others(11): Show |
GRP | ENSG00000134443.10 | transcript | ENST00000256857.7 | protein_coding | 3557 | chr18 | TogoVar | ||||||
HACE1_chr6_104723094_104864919 | 104727450 | TACACACA others(153): Show |
T | downstream_gene_variant | MODIFIER | HG02280.hp2 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0152 | 1 | 346 | 0.0029 | -160 | c.*20 others(11): Show |
HACE1 | ENSG00000085382.12 | transcript | ENST00000262903.9 | protein_coding | 643 | chr6 | TogoVar | ||||||
HDAC9_chr7_18490749_19007416 | 18732865 | GTGTACAC others(153): Show |
G | intron_variant | MODIFIER | HG03579.hp1 | a0001 | a0001c0002 | a0001c0002t0042 | a0001c0002t0042g0019 | 1 | 156 | 0.0064 | -160 | c.190 others(19): Show |
HDAC9 | ENSG00000048052.25 | transcript | ENST00000686413.1 | protein_coding | 13/25 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | |||||
IBA57_chr1_228160804_228187257 | 228174111 | GGCTGTGG others(153): Show |
G | intron_variant | MODIFIER | HG02109.hp2 HG02965.hp2 NA20129.hp2 |
a0001 | a0001c0001 | a0001c0001t0016a0001c0001t0024a0001c0001t0045 | a0001c0001t0016g0183a0001c0001t0024g0124a0001c0001t0045g0079 | 3 | 416 | 0.0072 | -160 | c.342 others(15): Show |
IBA57 | ENSG00000181873.13 | transcript | ENST00000366711.4 | protein_coding | 1/2 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | |||||
IBA57_chr1_228160804_228187257 | 228174352 | GCTGTGGG others(153): Show |
G | intron_variant | MODIFIER | HG00597.hp2 HG00639.hp1 HG00738.hp1 others(23): Show |
a0001a0002a0008 | a0001c0001a0002c0002a0008c0012 | a0001c0001t0005a0001c0001t0014a0001c0001t0015others(14): Show | a0001c0001t0005g0010a0001c0001t0005g0011a0001c0001t0014g0011others(18): Show | 26 | 416 | 0.0625 | -160 | c.342 others(15): Show |
IBA57 | ENSG00000181873.13 | transcript | ENST00000366711.4 | protein_coding | 1/2 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | |||||
IL17RA_chr22_17080000_17120693 | 17103953 | TGGTGTGG others(153): Show |
T | intron_variant | MODIFIER | HG01256.hp2 | a0002 | a0002c0003 | a0002c0003t0051 | a0002c0003t0051g0317 | 1 | 416 | 0.0024 | -160 | c.846 others(15): Show |
IL17RA | ENSG00000177663.15 | transcript | ENST00000319363.11 | protein_coding | 8/12 | INFO_REALIGN_3_PRIME | chr22 | TogoVar | |||||
IL1RAPL2_chrX_104561199_105772829 | 104585226 | ATGTGTAT others(153): Show |
A | intron_variant | MODIFIER | HG03139.hp1 NA20129.hp1 |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0072a0001c0001t0001g0074 | 2 | 141 | 0.0142 | -160 | c.-20 others(19): Show |
IL1RAPL2 | ENSG00000189108.14 | transcript | ENST00000372582.6 | protein_coding | 1/10 | INFO_REALIGN_3_PRIME | chrX | TogoVar | |||||
IL32_chr16_3060640_3074530 | 3066910 | CGGCCCAC others(153): Show |
C | intron_variant | MODIFIER | HG03041.hp2 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0367 | 1 | 458 | 0.0022 | -160 | c.16- others(13): Show |
IL32 | ENSG00000008517.19 | transcript | ENST00000525643.7 | protein_coding | 2/6 | INFO_REALIGN_3_PRIME | chr16 | TogoVar | |||||
IL32_chr16_3060640_3074530 | 3066957 | CGCAGGCC others(153): Show |
C | intron_variant | MODIFIER | HG00738.hp1 HG01261.hp2 HG01928.hp1 others(9): Show |
a0001a0003 | a0001c0001a0003c0005 | a0001c0001t0001a0001c0001t0002a0003c0005t0001 | a0001c0001t0001g0060a0001c0001t0001g0099a0001c0001t0001g0233others(9): Show | 12 | 458 | 0.0262 | -160 | c.16- others(13): Show |
IL32 | ENSG00000008517.19 | transcript | ENST00000525643.7 | protein_coding | 2/6 | INFO_REALIGN_3_PRIME | chr16 | TogoVar | |||||
IL32_chr16_3060640_3074530 | 3066960 | AGGCCCTG others(153): Show |
A | intron_variant | MODIFIER | HG00323.hp2 HG00558.hp1 HG00639.hp2 others(31): Show |
a0001 | a0001c0001a0001c0004 | a0001c0001t0001a0001c0001t0004a0001c0004t0001 | a0001c0001t0001g0027a0001c0001t0001g0033a0001c0001t0001g0039others(30): Show | 34 | 458 | 0.0742 | -160 | c.16- others(13): Show |
IL32 | ENSG00000008517.19 | transcript | ENST00000525643.7 | protein_coding | 2/6 | INFO_REALIGN_3_PRIME | chr16 | TogoVar | |||||
IMMT_chr2_86138936_86200462 | 86169644 | TTACATGT others(153): Show |
T | intron_variant | MODIFIER | HG02486.hp2 HG02897.hp2 HG03209.hp2 others(3): Show |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0261a0001c0001t0001g0262a0001c0001t0001g0263others(3): Show | 6 | 378 | 0.0159 | -160 | c.655 others(16): Show |
IMMT | ENSG00000132305.22 | transcript | ENST00000410111.8 | protein_coding | 6/14 | chr2 | TogoVar | ||||||
ITGA2B_chr17_44367181_44394649 | 44369429 | TCTGGTGG others(153): Show |
T | downstream_gene_variant | MODIFIER | HG01109.hp1 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0113 | 1 | 354 | 0.0028 | -160 | c.*27 others(11): Show |
ITGA2B | ENSG00000005961.19 | transcript | ENST00000262407.6 | protein_coding | 2751 | chr17 | TogoVar | ||||||
ITPR1_chr3_4488348_4852506 | 4619606 | CTCTGCCC others(153): Show |
C | intron_variant | MODIFIER | NA19074.hp2 | a0001 | a0001c0001 | a0001c0001t0005 | a0001c0001t0005g0034 | 1 | 176 | 0.0057 | -160 | c.164 others(17): Show |
ITPR1 | ENSG00000150995.21 | transcript | ENST00000649015.2 | protein_coding | 4/61 | INFO_REALIGN_3_PRIME | chr3 | TogoVar | |||||
JAKMIP3_chr10_132060946_132189858 | 132160706 | TGGGGGGG others(153): Show |
T | intron_variant | MODIFIER | HG02647.hp1 HG02965.hp2 HG03471.hp2 |
a0001a0004 | a0001c0042a0001c0048a0004c0014 | a0001c0042t0023a0001c0048t0013a0004c0014t0013 | a0001c0042t0023g0126a0001c0048t0013g0098a0004c0014t0013g0147 | 3 | 158 | 0.0190 | -160 | c.222 others(19): Show |
JAKMIP3 | ENSG00000188385.13 | transcript | ENST00000684848.1 | protein_coding | 19/23 | INFO_REALIGN_3_PRIME | chr10 | TogoVar | |||||
KCNJ5_chr11_128886356_128926163 | 128916038 | ATGGATGG others(153): Show |
A | intron_variant | MODIFIER | HG00423.hp2 HG00438.hp1 HG00558.hp2 others(54): Show |
a0001 | a0001c0001a0001c0011 | a0001c0001t0002a0001c0001t0009a0001c0001t0013others(32): Show | a0001c0001t0002g0006a0001c0001t0002g0115a0001c0001t0002g0122others(51): Show | 57 | 460 | 0.1239 | -160 | c.938 others(15): Show |
KCNJ5 | ENSG00000120457.12 | transcript | ENST00000529694.6 | protein_coding | 2/2 | INFO_REALIGN_3_PRIME | chr11 | TogoVar | |||||
KNDC1_chr10_133155219_133231412 | 133220338 | AGAGGAGG others(153): Show |
A | intron_variant | MODIFIER | HG00323.hp1 HG00408.hp2 HG00423.hp1 others(127): Show |
a0001a0002a0003others(14): Show | a0001c0001a0001c0004a0001c0068others(30): Show | a0001c0001t0002a0001c0004t0002a0001c0068t0002others(37): Show | a0001c0001t0002g0081a0001c0001t0002g0193a0001c0004t0002g0211others(125): Show | 130 | 332 | 0.3916 | -160 | c.501 others(17): Show |
KNDC1 | ENSG00000171798.19 | transcript | ENST00000304613.8 | protein_coding | 29/29 | INFO_REALIGN_3_PRIME | chr10 | TogoVar | |||||
KNDC1_chr10_133155219_133231412 | 133220357 | GCGCGCGC others(153): Show |
G | intron_variant | MODIFIER | HG02602.hp2 | a0013 | a0013c0060 | a0013c0060t0002 | a0013c0060t0002g0086 | 1 | 332 | 0.0030 | -160 | c.501 others(17): Show |
KNDC1 | ENSG00000171798.19 | transcript | ENST00000304613.8 | protein_coding | 29/29 | INFO_REALIGN_3_PRIME | chr10 | TogoVar | |||||
KNDC1_chr10_133155219_133231412 | 133220455 | GCGCGCCC others(153): Show |
G | intron_variant | MODIFIER | HG01106.hp1 | a0001 | a0001c0003 | a0001c0003t0003 | a0001c0003t0003g0296 | 1 | 332 | 0.0030 | -160 | c.501 others(17): Show |
KNDC1 | ENSG00000171798.19 | transcript | ENST00000304613.8 | protein_coding | 29/29 | INFO_REALIGN_3_PRIME | chr10 | TogoVar | |||||
LCN15_chr9_136754634_136769518 | 136769339 | CCCCCCCG others(153): Show |
C | upstream_gene_variant | MODIFIER | HG01884.hp2 HG02280.hp1 HG02818.hp2 others(1): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002 | a0001c0001t0001g0005a0001c0001t0002g0006 | 4 | 356 | 0.0112 | -160 | c.-50 others(11): Show |
LCN15 | ENSG00000177984.7 | transcript | ENST00000316144.6 | protein_coding | 4822 | chr9 | TogoVar | ||||||
LDB2_chr4_16496541_16903645 | 16810561 | TAAAAGGT others(153): Show |
T | intron_variant | MODIFIER | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(95): Show |
a0001 | a0001c0001a0001c0003 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(6): Show | a0001c0001t0001g0004a0001c0001t0001g0005a0001c0001t0001g0010others(95): Show | 98 | 162 | 0.6049 | -160 | c.133 others(19): Show |
LDB2 | ENSG00000169744.13 | transcript | ENST00000304523.10 | protein_coding | 1/7 | chr4 | TogoVar | ||||||
LDLRAD4_chr18_13213760_13657751 | 13499482 | CGTGGATA others(153): Show |
C | intron_variant | MODIFIER | homoSapiens_chm13v2.hp1 | a0001 | a0001c0001 | a0001c0001t0003 | a0001c0001t0003g0145 | 1 | 178 | 0.0056 | -160 | c.181 others(19): Show |
LDLRAD4 | ENSG00000168675.19 | transcript | ENST00000359446.11 | protein_coding | 4/6 | INFO_REALIGN_3_PRIME | chr18 | TogoVar | |||||
LIPG_chr18_49557057_49604185 | 49579027 | GGAGAGGG others(153): Show |
G | intron_variant | MODIFIER | HG02145.hp2 HG02486.hp1 |
a0001 | a0001c0001 | a0001c0001t0033a0001c0001t0086 | a0001c0001t0033g0275a0001c0001t0086g0273 | 2 | 384 | 0.0052 | -160 | c.794 others(17): Show |
LIPG | ENSG00000101670.12 | transcript | ENST00000261292.9 | protein_coding | 5/9 | INFO_REALIGN_3_PRIME | chr18 | TogoVar | |||||
LMLN_chr3_197955217_198048720 | 198003782 | CATCTATC others(153): Show |
C | intron_variant | MODIFIER | HG00140.hp1 HG00738.hp2 HG02109.hp2 others(9): Show |
a0001 | a0001c0001 | a0001c0001t0007a0001c0001t0010a0001c0001t0019others(1): Show | a0001c0001t0007g0084a0001c0001t0007g0085a0001c0001t0007g0086others(9): Show | 12 | 258 | 0.0465 | -160 | c.131 others(17): Show |
LMLN | ENSG00000185621.11 | transcript | ENST00000420910.7 | protein_coding | 12/16 | INFO_REALIGN_3_PRIME | chr3 | TogoVar | |||||
LOC400499_chr16_11367015_11532247 | 11493919 | GGGGGCGG others(153): Show |
G | intron_variant | MODIFIER | HG00408.hp1 HG00597.hp1 HG01257.hp2 others(9): Show |
a0004a0005a0019others(8): Show | a0004c0013a0005c0129a0019c0088others(8): Show | a0004c0013t0001a0005c0129t0003a0019c0088t0001others(8): Show | a0004c0013t0001g0208a0004c0013t0001g0250a0005c0129t0003g0209others(9): Show | 12 | 310 | 0.0387 | -160 | c.143 others(17): Show |
LOC400499 | ENSG00000188897.10 | transcript | ENST00000696174.1 | protein_coding | 11/66 | chr16 | TogoVar | ||||||
LOC400499_chr16_11367015_11532247 | 11493961 | GGGCGGGG others(153): Show |
G | intron_variant | MODIFIER | HG02165.hp1 HG02602.hp2 HG02735.hp1 others(2): Show |
a0002a0045a0235others(2): Show | a0002c0014a0045c0103a0235c0235others(2): Show | a0002c0014t0003a0045c0103t0003a0235c0235t0002others(2): Show | a0002c0014t0003g0123a0045c0103t0003g0289a0235c0235t0002g0070others(2): Show | 5 | 310 | 0.0161 | -160 | c.143 others(17): Show |
LOC400499 | ENSG00000188897.10 | transcript | ENST00000696174.1 | protein_coding | 11/66 | chr16 | TogoVar | ||||||
LRBA_chr4_150259435_151020284 | 150420449 | AATATATA others(153): Show |
A | intron_variant | MODIFIER | HG01891.hp2 HG02486.hp2 HG02723.hp2 others(2): Show |
a0001a0008 | a0001c0001a0008c0016 | a0001c0001t0001a0008c0016t0003 | a0001c0001t0001g0015a0001c0001t0001g0016a0001c0001t0001g0082others(2): Show | 5 | 180 | 0.0278 | -160 | c.704 others(19): Show |
LRBA | ENSG00000198589.15 | transcript | ENST00000651943.2 | protein_coding | 46/56 | chr4 | TogoVar | ||||||
LRBA_chr4_150259435_151020284 | 150658528 | CCTCTCCC others(153): Show |
C | intron_variant | MODIFIER | HG03041.hp2 HG03225.hp1 |
a0006 | a0006c0008 | a0006c0008t0001a0006c0008t0003 | a0006c0008t0001g0113a0006c0008t0003g0115 | 2 | 180 | 0.0111 | -160 | c.592 others(21): Show |
LRBA | ENSG00000198589.15 | transcript | ENST00000651943.2 | protein_coding | 37/56 | chr4 | TogoVar | ||||||
LY86_chr6_6583720_6659982 | 6612831 | ACCTTGAG others(153): Show |
A | intron_variant | MODIFIER | HG02258.hp2 HG02451.hp1 HG03516.hp2 others(3): Show |
a0001a0002a0003 | a0001c0001a0002c0002a0003c0004 | a0001c0001t0001a0002c0002t0001a0003c0004t0001 | a0001c0001t0001g0105a0001c0001t0001g0289a0001c0001t0001g0290others(3): Show | 6 | 424 | 0.0142 | -160 | c.137 others(19): Show |
LY86 | ENSG00000112799.9 | transcript | ENST00000230568.5 | protein_coding | 1/4 | INFO_REALIGN_3_PRIME | chr6 | TogoVar | |||||
MAP4K4_chr2_101692707_101899690 | 101785658 | TCTTCTTT others(153): Show |
T | intron_variant | MODIFIER | NA18942.hp2 NA18965.hp1 |
a0001 | a0001c0001 | a0001c0001t0002a0001c0001t0020 | a0001c0001t0002g0249a0001c0001t0020g0250 | 2 | 310 | 0.0065 | -160 | c.124 others(17): Show |
MAP4K4 | ENSG00000071054.17 | transcript | ENST00000324219.9 | protein_coding | 2/32 | chr2 | TogoVar | ||||||
MAPK8IP3_chr16_1701195_1775351 | 1736332 | ATCCGTGT others(153): Show |
A | intron_variant | MODIFIER | HG01891.hp1 HG02055.hp2 HG02572.hp2 others(5): Show |
a0001 | a0001c0001a0001c0005a0001c0015others(1): Show | a0001c0001t0002a0001c0005t0013a0001c0015t0002others(1): Show | a0001c0001t0002g0312a0001c0001t0002g0313a0001c0001t0002g0319others(5): Show | 8 | 330 | 0.0242 | -160 | c.602 others(17): Show |
MAPK8IP3 | ENSG00000138834.15 | transcript | ENST00000610761.2 | protein_coding | 4/31 | INFO_REALIGN_3_PRIME | chr16 | TogoVar | |||||
MCTP2_chr15_94226561_94488952 | 94244406 | TCGTATAT others(153): Show |
T | intron_variant | MODIFIER | HG01884.hp1 HG02257.hp1 HG02451.hp1 others(12): Show |
a0001a0002a0004others(2): Show | a0001c0001a0001c0002a0001c0013others(5): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0009others(11): Show | a0001c0001t0001g0049a0001c0001t0002g0031a0001c0001t0009g0030others(12): Show | 15 | 276 | 0.0544 | -160 | c.-66 others(19): Show |
MCTP2 | ENSG00000140563.16 | transcript | ENST00000357742.10 | protein_coding | 1/22 | INFO_REALIGN_3_PRIME | chr15 | TogoVar | |||||
MCTP2_chr15_94226561_94488952 | 94244526 | TCGTATAT others(153): Show |
T | intron_variant | MODIFIER | HG01255.hp1 | a0002 | a0002c0003 | a0002c0003t0029 | a0002c0003t0029g0139 | 1 | 276 | 0.0036 | -160 | c.-66 others(19): Show |
MCTP2 | ENSG00000140563.16 | transcript | ENST00000357742.10 | protein_coding | 1/22 | INFO_REALIGN_3_PRIME | chr15 | TogoVar | |||||
MDK_chr11_46376669_46388801 | 46386979 | GCTGTGGA others(153): Show |
G | downstream_gene_variant | MODIFIER | HG00099.hp2 HG01123.hp2 HG01169.hp2 others(3): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0001a0001c0002t0001 | a0001c0001t0001g0005a0001c0002t0001g0005 | 6 | 310 | 0.0194 | -160 | c.*34 others(11): Show |
MDK | ENSG00000110492.17 | transcript | ENST00000395566.9 | protein_coding | 3179 | chr11 | TogoVar | ||||||
METAP1D_chr2_171994953_172087430 | 172042575 | ATATATGT others(153): Show |
A | intron_variant | MODIFIER | NA18964.hp1 | a0001 | a0001c0001 | a0001c0001t0007 | a0001c0001t0007g0161 | 1 | 356 | 0.0028 | -160 | c.41- others(17): Show |
METAP1D | ENSG00000172878.14 | transcript | ENST00000315796.5 | protein_coding | 1/9 | INFO_REALIGN_3_PRIME | chr2 | TogoVar |