view | regionname | pos | ref | alt | annotation | impact | samples | ahapids | chapids | thapids | thapids | ac | an | af | len | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length
|
cds cds pos length
|
aa aa pos length
|
distance | status | chr | external |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
SNTG2_chr2_945849_1372613 | 1345199 | TCCCCCTG others(1016): Show |
T | intron_variant | MODIFIER | HG03540.hp1 | a0003 | a0003c0026 | a0003c0026t0001 | a0003c0026t0001g0097 | 1 | 175 | 0.0057 | -1023 | c.148 others(21): Show |
SNTG2 | ENSG00000172554.12 | transcript | ENST00000308624.10 | protein_coding | 16/16 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||||
CDC42BPB_chr14_102927380_103062549 | 103034774 | TGCCACTG others(1015): Show |
T | intron_variant | MODIFIER | HG03209.hp2 | a0001 | a0001c0001 | a0001c0001t0038 | a0001c0001t0038g0254 | 1 | 318 | 0.0031 | -1022 | c.175 others(19): Show |
CDC42BPB | ENSG00000198752.11 | transcript | ENST00000361246.7 | protein_coding | 1/36 | chr14 | TogoVar | |||||||
INPP5A_chr10_132532787_132788480 | 132771767 | TGAAGAGT others(1015): Show |
T | intron_variant | MODIFIER | HG02809.hp2 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0100 | 1 | 197 | 0.0051 | -1022 | c.978 others(17): Show |
INPP5A | ENSG00000068383.19 | transcript | ENST00000368594.8 | protein_coding | 12/15 | INFO_REALIGN_3_PRIME | chr10 | TogoVar | ||||||
LETM1_chr4_1806479_1861156 | 1828316 | GGGCAGGG others(1014): Show |
G | intron_variant | MODIFIER | HG01975.hp1 HG02257.hp2 HG03098.hp2 others(4): Show |
a0001a0005 | a0001c0002a0005c0005 | a0001c0002t0004a0001c0002t0017a0001c0002t0019others(2): Show | a0001c0002t0004g0020 a0001c0002t0004g0021 a0001c0002t0017g0019 others(3): Show |
7 | 198 | 0.0354 | -1021 | c.108 others(19): Show |
LETM1 | ENSG00000168924.15 | transcript | ENST00000302787.3 | protein_coding | 6/13 | chr4 | TogoVar | |||||||
ADAMTSL3_chr15_83649123_84044842 | 83909740 | GAGTAGCT others(1013): Show |
G | intron_variant | MODIFIER | HG00558.hp1 | a0003 | a0003c0003 | a0003c0003t0001 | a0003c0003t0001g0246 | 1 | 272 | 0.0037 | -1020 | c.170 others(19): Show |
ADAMTSL3 | ENSG00000156218.13 | transcript | ENST00000286744.10 | protein_coding | 15/29 | INFO_REALIGN_3_PRIME | chr15 | TogoVar | ||||||
ATL1_chr14_50555145_50638045 | 50624013 | CCACTGCA others(1013): Show |
C | intron_variant | MODIFIER | HG01358.hp1 | a0001 | a0001c0002 | a0001c0002t0001 | a0001c0002t0001g0283 | 1 | 318 | 0.0031 | -1020 | c.111 others(18): Show |
ATL1 | ENSG00000198513.14 | transcript | ENST00000358385.12 | protein_coding | 11/13 | INFO_REALIGN_3_PRIME | chr14 | TogoVar | ||||||
LUC7L_chr16_183990_234449 | 186034 | AGGAATAC others(1013): Show |
A | downstream_gene_variant | MODIFIER | NA19085.hp2 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0097 | 1 | 273 | 0.0037 | -1020 | c.*21 others(11): Show |
LUC7L | ENSG00000007392.17 | transcript | ENST00000293872.13 | protein_coding | 2955 | chr16 | TogoVar | |||||||
MMD2_chr7_4900998_4964187 | 4932620 | GTGCATTT others(1013): Show |
G | intron_variant | MODIFIER | HG02615.hp2 | a0001 | a0001c0001 | a0001c0001t0015 | a0001c0001t0015g0147 | 1 | 380 | 0.0026 | -1020 | c.48- others(15): Show |
MMD2 | ENSG00000136297.15 | transcript | ENST00000401401.8 | protein_coding | 1/6 | chr7 | TogoVar | |||||||
SMOC2_chr6_168436184_168672992 | 168593242 | GGGCGTCT others(1013): Show |
G | intron_variant | MODIFIER | NA20905.hp1 | a0001 | a0001c0002 | a0001c0002t0002 | a0001c0002t0002g0066 | 1 | 172 | 0.0058 | -1020 | c.638 others(17): Show |
SMOC2 | ENSG00000112562.20 | transcript | ENST00000356284.7 | protein_coding | 7/12 | chr6 | TogoVar | |||||||
UBR3_chr2_169822454_170089131 | 169960351 | TCTTTATA others(1013): Show |
T | intron_variant | MODIFIER | HG03041.hp2 | a0001 | a0001c0010 | a0001c0010t0011 | a0001c0010t0011g0225 | 1 | 322 | 0.0031 | -1020 | c.363 others(19): Show |
UBR3 | ENSG00000144357.18 | transcript | ENST00000272793.11 | protein_coding | 24/38 | chr2 | TogoVar | |||||||
VPS53_chr17_503668_719839 | 645765 | AGGCTCCC others(1013): Show |
A | intron_variant | MODIFIER | HG00423.hp2 HG00741.hp2 HG01081.hp2 others(41): Show |
a0001a0007 | a0001c0001a0001c0007a0007c0012 | a0001c0001t0002a0001c0001t0011a0001c0001t0015others(23): Show | a0001c0001t0002g0121 a0001c0001t0002g0128 a0001c0001t0002g0133 others(41): Show |
44 | 200 | 0.2200 | -1020 | c.608 others(17): Show |
VPS53 | ENSG00000141252.21 | transcript | ENST00000437048.7 | protein_coding | 7/21 | chr17 | TogoVar | |||||||
ASTN2_chr9_116418112_117420057 | 116661454 | AGGTTTAC others(1012): Show |
A | intron_variant | MODIFIER | HG01884.hp2 | a0001 | a0001c0025 | a0001c0025t0001 | a0001c0025t0001g0080 | 1 | 100 | 0.0100 | -1019 | c.280 others(20): Show |
ASTN2 | ENSG00000148219.18 | transcript | ENST00000313400.9 | protein_coding | 16/22 | chr9 | TogoVar | |||||||
CCDC200_chr17_43216420_43233623 | 43232604 | ATTATATC others(1012): Show |
A | upstream_gene_variant | MODIFIER | HG02615.hp1 | a0005 | a0005c0006 | a0005c0006t0001 | a0005c0006t0001g0063 | 1 | 331 | 0.0030 | -1019 | c.-50 others(11): Show |
CCDC200 | ENSG00000236383.9 | transcript | ENST00000636331.2 | protein_coding | 3982 | chr17 | TogoVar | |||||||
DDX51_chr12_132131594_132149319 | 132134931 | CCCCGAGT others(1012): Show |
C | downstream_gene_variant | MODIFIER | HG00323.hp1 HG01361.hp2 HG03239.hp1 others(1): Show |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0001 | 4 | 329 | 0.0122 | -1019 | c.*33 others(11): Show |
DDX51 | ENSG00000185163.10 | transcript | ENST00000397333.4 | protein_coding | 1662 | chr12 | TogoVar | |||||||
GMDS_chr6_1618806_2250605 | 2207108 | AAGAAGTC others(1012): Show |
A | intron_variant | MODIFIER | HG02615.hp2 NA20129.hp2 |
a0001 | a0001c0001a0001c0002 | a0001c0001t0001a0001c0002t0002 | a0001c0001t0001g0077 a0001c0002t0002g0078 |
2 | 164 | 0.0122 | -1019 | c.102 others(19): Show |
GMDS | ENSG00000112699.11 | transcript | ENST00000380815.5 | protein_coding | 1/10 | chr6 | TogoVar | |||||||
MCEE_chr2_71104687_71135229 | 71125328 | CCTCCCGA others(1012): Show |
C | intron_variant | MODIFIER | NA18975.hp1 NA19088.hp1 |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0078 a0001c0001t0001g0079 |
2 | 416 | 0.0048 | -1019 | c.41- others(14): Show |
MCEE | ENSG00000124370.11 | transcript | ENST00000244217.6 | protein_coding | 1/2 | chr2 | TogoVar | |||||||
SGSM3_chr22_40365594_40415289 | 40398219 | GGCCTCCC others(1012): Show |
G | intron_variant | MODIFIER | HG00280.hp2 HG00438.hp1 HG00558.hp1 others(84): Show |
a0001a0002a0005others(3): Show | a0001c0001a0001c0002a0002c0006others(4): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0007others(8): Show | a0001c0001t0001g0037 a0001c0001t0001g0038 a0001c0001t0001g0039 others(77): Show |
87 | 290 | 0.3000 | -1019 | c.-11 others(19): Show |
SGSM3 | ENSG00000100359.21 | transcript | ENST00000248929.14 | protein_coding | 1/21 | INFO_REALIGN_3_PRIME | chr22 | TogoVar | ||||||
SNTG2_chr2_945849_1372613 | 1343723 | CTTTTCCC others(1012): Show |
C | intron_variant | MODIFIER | HG01346.hp2 HG02922.hp1 NA18990.hp2 |
a0003a0008 | a0003c0007a0008c0011a0008c0031 | a0003c0007t0001a0008c0011t0001a0008c0031t0001 | a0003c0007t0001g0019 a0008c0011t0001g0004 a0008c0031t0001g0117 |
3 | 187 | 0.0160 | -1019 | c.148 others(21): Show |
SNTG2 | ENSG00000172554.12 | transcript | ENST00000308624.10 | protein_coding | 16/16 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||||
SNTG2_chr2_945849_1372613 | 1344067 | CCCCCTGT others(1012): Show |
C | intron_variant | MODIFIER | HG00642.hp2 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0078 | 1 | 188 | 0.0053 | -1019 | c.148 others(21): Show |
SNTG2 | ENSG00000172554.12 | transcript | ENST00000308624.10 | protein_coding | 16/16 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||||
TSPAN9_chr12_3072379_3291559 | 3197818 | TCACCACC others(1012): Show |
T | intron_variant | MODIFIER | HG00642.hp1 | a0001 | a0001c0003 | a0001c0003t0033 | a0001c0003t0033g0093 | 1 | 286 | 0.0035 | -1019 | c.-17 others(17): Show |
TSPAN9 | ENSG00000011105.14 | transcript | ENST00000011898.10 | protein_coding | 2/8 | INFO_REALIGN_3_PRIME | chr12 | TogoVar | ||||||
FSTL5_chr4_161378897_162169000 | 161706984 | TAACTCTT others(1011): Show |
T | intron_variant | MODIFIER | HG02615.hp1 HG03471.hp2 |
a0001a0005 | a0001c0002a0005c0007 | a0001c0002t0021a0005c0007t0001 | a0001c0002t0021g0138 a0005c0007t0001g0094 |
2 | 140 | 0.0143 | -1018 | c.727 others(19): Show |
FSTL5 | ENSG00000168843.14 | transcript | ENST00000306100.10 | protein_coding | 6/15 | chr4 | TogoVar | |||||||
HIP1_chr7_75528298_75743941 | 75585276 | CCAGGTTC others(1011): Show |
C | intron_variant | MODIFIER | HG03471.hp2 | a0003 | a0003c0006 | a0003c0006t0004 | a0003c0006t0004g0017 | 1 | 252 | 0.0040 | -1018 | c.465 others(16): Show |
HIP1 | ENSG00000127946.17 | transcript | ENST00000336926.11 | protein_coding | 5/30 | chr7 | TogoVar | |||||||
PCDH11X_chrX_91774375_92628230 | 92495748 | CTTACATG others(1011): Show |
C | intron_variant | MODIFIER | HG02145.hp1 HG02615.hp1 HG02895.hp1 others(5): Show |
a0001 | a0001c0001a0001c0002a0001c0003 | a0001c0001t0002a0001c0001t0006a0001c0001t0007others(5): Show | a0001c0001t0002g0001 a0001c0001t0006g0021 a0001c0001t0007g0017 others(5): Show |
8 | 154 | 0.0519 | -1018 | c.336 others(21): Show |
PCDH11X | ENSG00000102290.23 | transcript | ENST00000682573.1 | protein_coding | 10/10 | INFO_REALIGN_3_PRIME | chrX | TogoVar | ||||||
CHMP2B_chr3_87222309_87260556 | 87256474 | ATTTGAAT others(1010): Show |
A | downstream_gene_variant | MODIFIER | HG01243.hp2 HG01891.hp2 HG02109.hp2 others(4): Show |
a0002 | a0002c0004 | a0002c0004t0004a0002c0004t0009 | a0002c0004t0004g0025 a0002c0004t0004g0116 a0002c0004t0004g0117 others(2): Show |
7 | 412 | 0.0170 | -1017 | c.*26 others(11): Show |
CHMP2B | ENSG00000083937.10 | transcript | ENST00000263780.9 | protein_coding | 919 | chr3 | TogoVar | |||||||
POU1F1_chr3_87254404_87281584 | 87256474 | ATTTGAAT others(1010): Show |
A | downstream_gene_variant | MODIFIER | HG01243.hp1 HG01891.hp2 HG02109.hp1 others(4): Show |
a0001 | a0001c0001 | a0001c0001t0006a0001c0001t0010 | a0001c0001t0006g0037 a0001c0001t0006g0064 a0001c0001t0006g0096 others(3): Show |
7 | 418 | 0.0167 | -1017 | c.*24 others(11): Show |
POU1F1 | ENSG00000064835.12 | transcript | ENST00000350375.7 | protein_coding | 2929 | chr3 | TogoVar | |||||||
RASSF3_chr12_64605495_64702564 | 64623682 | ACCCAGGC others(1010): Show |
A | intron_variant | MODIFIER | HG06807.hp1 NA18522.hp1 NA19240.hp2 |
a0001 | a0001c0001 | a0001c0001t0078a0001c0001t0079a0001c0001t0080 | a0001c0001t0078g0361 a0001c0001t0079g0360 a0001c0001t0080g0368 |
3 | 368 | 0.0082 | -1017 | c.111 others(19): Show |
RASSF3 | ENSG00000153179.14 | transcript | ENST00000542104.6 | protein_coding | 1/4 | INFO_REALIGN_3_PRIME | chr12 | TogoVar | ||||||
SNTG2_chr2_945849_1372613 | 1343615 | CCCCTGTT others(1010): Show |
C | intron_variant | MODIFIER | HG03540.hp1 | a0003 | a0003c0026 | a0003c0026t0001 | a0003c0026t0001g0097 | 1 | 182 | 0.0055 | -1017 | c.148 others(21): Show |
SNTG2 | ENSG00000172554.12 | transcript | ENST00000308624.10 | protein_coding | 16/16 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||||
AQR_chr15_34846782_34974742 | 34904642 | CCCTCCAC others(1009): Show |
C | intron_variant | MODIFIER | HG02257.hp1 HG03540.hp2 |
a0001 | a0001c0008 | a0001c0008t0018 | a0001c0008t0018g0177 a0001c0008t0018g0178 |
2 | 310 | 0.0065 | -1016 | c.183 others(17): Show |
AQR | ENSG00000021776.11 | transcript | ENST00000156471.10 | protein_coding | 18/34 | chr15 | TogoVar | |||||||
CNN2_chr19_1021608_1044065 | 1033970 | CGGTGTCT others(1009): Show |
C | intron_variant | MODIFIER | HG01168.hp2 NA20752.hp2 |
a0001 | a0001c0001a0001c0005 | a0001c0001t0001a0001c0005t0007 | a0001c0001t0001g0091 a0001c0005t0007g0099 |
2 | 388 | 0.0052 | -1016 | c.390 others(17): Show |
CNN2 | ENSG00000064666.15 | transcript | ENST00000263097.9 | protein_coding | 4/6 | chr19 | TogoVar | |||||||
LUC7L_chr16_183990_234449 | 186152 | GGGGAACA others(1009): Show |
G | downstream_gene_variant | MODIFIER | HG00544.hp1 HG02717.hp1 HG02886.hp2 others(1): Show |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0092 a0001c0001t0001g0135 a0001c0001t0001g0136 others(1): Show |
4 | 324 | 0.0123 | -1016 | c.*20 others(11): Show |
LUC7L | ENSG00000007392.17 | transcript | ENST00000293872.13 | protein_coding | 2837 | chr16 | TogoVar | |||||||
MAP2K5_chr15_67537703_67812114 | 67575983 | GATCTCGG others(1009): Show |
G | intron_variant | MODIFIER | HG00280.hp2 HG00323.hp1 HG00558.hp1 others(45): Show |
a0001 | a0001c0001 | a0001c0001t0004a0001c0001t0008 | a0001c0001t0004g0066 a0001c0001t0004g0229 a0001c0001t0004g0230 others(45): Show |
48 | 276 | 0.1739 | -1016 | c.253 others(17): Show |
MAP2K5 | ENSG00000137764.20 | transcript | ENST00000178640.10 | protein_coding | 3/21 | INFO_REALIGN_3_PRIME | chr15 | TogoVar | ||||||
ZNF516_chr18_76352682_76500242 | 76393751 | CGGGTGGT others(1009): Show |
C | intron_variant | MODIFIER | HG02896.hp2 HG02897.hp2 |
a0002 | a0002c0013 | a0002c0013t0042 | a0002c0013t0042g0186 a0002c0013t0042g0187 |
2 | 343 | 0.0058 | -1016 | c.181 others(21): Show |
ZNF516 | ENSG00000101493.11 | transcript | ENST00000443185.7 | protein_coding | 3/6 | chr18 | TogoVar | |||||||
ACER1_chr19_6301142_6338612 | 6330473 | GCTAGTTT others(1008): Show |
G | intron_variant | MODIFIER | HG01358.hp2 HG01433.hp2 HG02451.hp1 others(12): Show |
a0001 | a0001c0001a0001c0004 | a0001c0001t0001a0001c0004t0001 | a0001c0001t0001g0028 a0001c0001t0001g0029 a0001c0001t0001g0030 others(12): Show |
15 | 394 | 0.0381 | -1015 | c.93+ others(15): Show |
ACER1 | ENSG00000167769.5 | transcript | ENST00000301452.5 | protein_coding | 1/5 | chr19 | TogoVar | |||||||
ITSN1_chr21_33637501_33904861 | 33652044 | CTAAAAGC others(1008): Show |
C | intron_variant | MODIFIER | HG02818.hp1 HG06807.hp2 NA19043.hp2 |
a0001 | a0001c0002a0001c0027 | a0001c0002t0013a0001c0002t0069a0001c0027t0010 | a0001c0002t0013g0241 a0001c0002t0069g0242 a0001c0027t0010g0240 |
3 | 240 | 0.0125 | -1015 | c.-33 others(18): Show |
ITSN1 | ENSG00000205726.15 | transcript | ENST00000381318.8 | protein_coding | 1/39 | INFO_REALIGN_3_PRIME | chr21 | TogoVar | ||||||
UBE2K_chr4_39693136_39787792 | 39711180 | TGAGACGG others(1008): Show |
T | intron_variant | MODIFIER | HG01515.hp2 | a0001 | a0001c0001 | a0001c0001t0015 | a0001c0001t0015g0010 | 1 | 334 | 0.0030 | -1015 | c.63+ others(17): Show |
UBE2K | ENSG00000078140.14 | transcript | ENST00000261427.10 | protein_coding | 1/6 | chr4 | TogoVar | |||||||
ZSCAN5A_chr19_56216303_56319839 | 56235036 | GAAGCCTC others(1008): Show |
G | intron_variant | MODIFIER | HG01981.hp2 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0252 | 1 | 311 | 0.0032 | -1015 | c.-12 others(20): Show |
ZSCAN5A | ENSG00000131848.10 | transcript | ENST00000683990.1 | protein_coding | 2/5 | chr19 | TogoVar | |||||||
ASAP1_chr8_130047104_130448674 | 130049197 | GGAACACA others(1007): Show |
G | downstream_gene_variant | MODIFIER | HG02300.hp2 | a0002 | a0002c0003 | a0002c0003t0001 | a0002c0003t0001g0031 | 1 | 297 | 0.0034 | -1014 | c.*45 others(11): Show |
ASAP1 | ENSG00000153317.15 | transcript | ENST00000518721.6 | protein_coding | 2906 | chr8 | TogoVar | |||||||
ATP5F1A_chr18_46075248_46103296 | 46096714 | GCTCATGC others(1007): Show |
G | intron_variant | MODIFIER | HG00544.hp2 HG00597.hp2 NA18940.hp1 others(4): Show |
a0001 | a0001c0001 | a0001c0001t0002a0001c0001t0022a0001c0001t0023others(1): Show | a0001c0001t0002g0034 a0001c0001t0002g0125 a0001c0001t0002g0126 others(3): Show |
7 | 388 | 0.0180 | -1014 | c.60+ others(14): Show |
ATP5F1A | ENSG00000152234.16 | transcript | ENST00000398752.11 | protein_coding | 1/11 | chr18 | TogoVar | |||||||
ZBTB45_chr19_58508530_58524810 | 58523796 | GAGTAGCT others(1007): Show |
G | upstream_gene_variant | MODIFIER | NA18950.hp2 NA18969.hp1 |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0001 | 2 | 408 | 0.0049 | -1014 | c.-50 others(11): Show |
ZBTB45 | ENSG00000119574.13 | transcript | ENST00000594051.6 | protein_coding | 3987 | chr19 | TogoVar | |||||||
FAM78A_chr9_131253078_131281510 | 131261970 | TAATCCCA others(1006): Show |
T | intron_variant | MODIFIER | HG03195.hp2 HG03516.hp2 |
a0001 | a0001c0002 | a0001c0002t0003 | a0001c0002t0003g0049 | 2 | 416 | 0.0048 | -1013 | c.324 others(16): Show |
FAM78A | ENSG00000126882.14 | transcript | ENST00000372271.4 | protein_coding | 1/1 | chr9 | TogoVar | |||||||
TPO_chr2_1408463_1548673 | 1531907 | CTCAAATC others(1006): Show |
C | intron_variant | MODIFIER | HG01069.hp2 HG01071.hp2 HG01167.hp2 others(14): Show |
a0001a0002a0006others(1): Show | a0001c0001a0002c0002a0002c0015others(4): Show | a0001c0001t0003a0002c0002t0003a0002c0002t0006others(5): Show | a0001c0001t0003g0081 a0001c0001t0003g0128 a0002c0002t0003g0056 others(14): Show |
17 | 128 | 0.1328 | -1013 | c.261 others(19): Show |
TPO | ENSG00000115705.22 | transcript | ENST00000329066.9 | protein_coding | 15/16 | chr2 | TogoVar | |||||||
ZNF143_chr11_9456012_9533524 | 9504239 | TTGAGCCA others(1006): Show |
T | intron_variant | MODIFIER | HG00140.hp1 HG00280.hp2 HG00438.hp1 others(86): Show |
a0001a0004 | a0001c0001a0004c0005 | a0001c0001t0001a0004c0005t0001 | a0001c0001t0001g0041 a0001c0001t0001g0042 a0001c0001t0001g0043 others(86): Show |
89 | 330 | 0.2697 | -1013 | c.114 others(19): Show |
ZNF143 | ENSG00000166478.10 | transcript | ENST00000396602.7 | protein_coding | 11/15 | INFO_REALIGN_3_PRIME | chr11 | TogoVar | ||||||
ZNF143_chr11_9456012_9533524 | 9504250 | CACCTGGC others(1006): Show |
C | intron_variant | MODIFIER | HG00639.hp2 HG02451.hp2 HG03139.hp1 |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0037 a0001c0001t0001g0038 a0001c0001t0001g0039 |
3 | 330 | 0.0091 | -1013 | c.114 others(19): Show |
ZNF143 | ENSG00000166478.10 | transcript | ENST00000396602.7 | protein_coding | 11/15 | chr11 | TogoVar | |||||||
DOC2B_chr17_137789_186650 | 170846 | GCAGCACC others(1005): Show |
G | intron_variant | MODIFIER | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(259): Show |
a0001a0003 | a0001c0001a0001c0002a0001c0003others(4): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0005others(48): Show | a0001c0001t0001g0002 a0001c0001t0001g0005 a0001c0001t0001g0007 others(230): Show |
262 | 338 | 0.7751 | -1012 | c.453 others(16): Show |
DOC2B | ENSG00000272636.5 | transcript | ENST00000613549.3 | protein_coding | 2/8 | chr17 | TogoVar | |||||||
FAM149A_chr4_186099704_186180337 | 186173611 | CCTCCCAA others(1005): Show |
C | 3_prime_UTR_variant | MODIFIER | HG00673.hp2 HG02004.hp2 |
a0001 | a0001c0001a0001c0014 | a0001c0001t0052a0001c0014t0042 | a0001c0001t0052g0043 a0001c0014t0042g0005 |
2 | 291 | 0.0069 | -1012 | c.*16 others(11): Show |
FAM149A | ENSG00000109794.14 | transcript | ENST00000706927.1 | protein_coding | 14/14 | 1625 | chr4 | TogoVar | ||||||
FNTA_chr8_43051323_43090785 | 43065499 | AGCCTCCC others(1005): Show |
A | intron_variant | MODIFIER | HG01192.hp2 HG01884.hp1 HG01884.hp2 others(6): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002 | a0001c0001t0001g0013 a0001c0001t0001g0091 a0001c0001t0001g0174 others(4): Show |
9 | 292 | 0.0308 | -1012 | c.401 others(17): Show |
FNTA | ENSG00000168522.13 | transcript | ENST00000302279.8 | protein_coding | 3/8 | INFO_REALIGN_3_PRIME | chr8 | TogoVar | ||||||
SKI_chr1_2223319_2315213 | 2281208 | AGGACGCC others(1005): Show |
A | intron_variant | MODIFIER | NA19240.hp2 | a0001 | a0001c0001 | a0001c0001t0020 | a0001c0001t0020g0166 | 1 | 262 | 0.0038 | -1012 | c.970 others(19): Show |
SKI | ENSG00000157933.11 | transcript | ENST00000378536.5 | protein_coding | 1/6 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | ||||||
CCL26_chr7_75764538_75777211 | 75764767 | CAGGCAGG others(1004): Show |
C | downstream_gene_variant | MODIFIER | HG00280.hp2 HG00323.hp2 |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0001 | 2 | 422 | 0.0047 | -1011 | c.*39 others(11): Show |
CCL26 | ENSG00000006606.9 | transcript | ENST00000005180.9 | protein_coding | 4770 | chr7 | TogoVar | |||||||
GAL3ST2_chr2_241771822_241809287 | 241805443 | TCCCTCCC others(1004): Show |
T | downstream_gene_variant | MODIFIER | HG03239.hp2 | a0002 | a0002c0002 | a0002c0002t0002 | a0002c0002t0002g0120 | 1 | 310 | 0.0032 | -1011 | c.*12 others(11): Show |
GAL3ST2 | ENSG00000154252.12 | transcript | ENST00000192314.7 | protein_coding | 1157 | chr2 | TogoVar | |||||||
NEU4_chr2_241804193_241822413 | 241805443 | TCCCTCCC others(1004): Show |
T | upstream_gene_variant | MODIFIER | HG03239.hp2 | a0001 | a0001c0001 | a0001c0001t0003 | a0001c0001t0003g0179 | 1 | 316 | 0.0032 | -1011 | c.-38 others(11): Show |
NEU4 | ENSG00000204099.12 | transcript | ENST00000407683.6 | protein_coding | 3749 | chr2 | TogoVar |